BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 008105
         (577 letters)

Database: nr 
           23,463,169 sequences; 8,064,228,071 total letters

Searching..................................................done



>gi|359488082|ref|XP_002266772.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Vitis vinifera]
          Length = 498

 Score =  691 bits (1783), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 325/464 (70%), Positives = 388/464 (83%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G FV NDE+TNN+ILQN CS+GKL +AS+LID+MARRNQIP F  CINLIRGLI+++  E
Sbjct: 32  GSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTE 91

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A++VL+IMVMSGG+PD ITYNM+VGGLCK+G +++AI LLDEMS+SGC PD ITYNTIL
Sbjct: 92  RATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTIL 151

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           R MFD+G F QAIGFWKDQLRKGCP YLITYT+LIE VCK CG  +A+EVL+DMAIEGC 
Sbjct: 152 RCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCY 211

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PDIVTYNSLVN++CKQGKY+D  L+I NLLS GM PN++TYNTLLHSL + G WD VD+I
Sbjct: 212 PDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEI 271

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L IMN  S  PTV TYNILINGLCKYGL+DRAIN F+QMVS NC PDI+TYNT+L ALCK
Sbjct: 272 LLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCK 331

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           EGM++EAL LLH LN + CSP LITYN +IDGLAKKGCMEKAM LYG+M+E G +PDDIT
Sbjct: 332 EGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPDDIT 391

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           HRTL WG  R D VE+A+ +LKE+ KR  +++NSA+R VIHGLCK KKVD+AIQVLE+M+
Sbjct: 392 HRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCKKKKVDIAIQVLEMMV 451

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
           SS+ KP++ ++S I+K V   GM EEA +L QKL E KVF + T
Sbjct: 452 SSQCKPNEEIYSAIIKGVGAAGMIEEANQLHQKLTELKVFREET 495


>gi|224144580|ref|XP_002325338.1| predicted protein [Populus trichocarpa]
 gi|222862213|gb|EEE99719.1| predicted protein [Populus trichocarpa]
          Length = 481

 Score =  673 bits (1737), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 319/474 (67%), Positives = 397/474 (83%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           +T ++H  S+  +DGP VENDE+TNN+IL N C +G L +A+KLIDIM+R NQIP+    
Sbjct: 1   MTTRNHGSSILFADGPLVENDEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCS 60

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
            NLIRGL+RI RIE+AS+VL+ MVMSG VPD ITYNMMVGG CKR Q+RSAI LL++MS+
Sbjct: 61  TNLIRGLVRIGRIERASRVLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSL 120

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
           SGC PDVITYNTI+R++FDNGKF QA+ FW+ QLR+GC PYLI YTILIE V K CG  R
Sbjct: 121 SGCPPDVITYNTIIRSLFDNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVR 180

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+EVL+DMAIEGC PD+VTYNSLVNF+ K+GKY+DA L+I N+LS GMEPN+ITYN+LLH
Sbjct: 181 ALEVLEDMAIEGCYPDLVTYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLH 240

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           SL S G WD VD+IL IM + SH PTV TYNILINGLCK GLV+RAIN F QMVS+NC P
Sbjct: 241 SLCSCGLWDEVDEILAIMKKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSP 300

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           DI+TYNT+L ALCKEGM++EALQ+  LL+ S+CSP LITYNT+IDGL ++G M++A+ LY
Sbjct: 301 DIITYNTLLTALCKEGMVDEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLY 360

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            QM+E GI+PD ITHR+L+WGFC  DQVE+AV++L+E+GKR +++ +SAYRLVI+GLC++
Sbjct: 361 NQMIEKGIAPDGITHRSLVWGFCWIDQVEDAVEILREMGKRDHRINSSAYRLVINGLCRN 420

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           K+VD+AIQVLE+MIS RYKPD+ ++ST++K VAD GM EEA +L QKLIE KV 
Sbjct: 421 KRVDIAIQVLEMMISGRYKPDEEIYSTLIKSVADAGMVEEADELHQKLIERKVL 474



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 161/356 (45%)

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
           E D  T N IL  +   G   +A        R    P     T LI  + +   I RA  
Sbjct: 19  ENDEETNNEILHNLCKKGSLMEATKLIDIMSRVNQIPNSTCSTNLIRGLVRIGRIERASR 78

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           VL  M + G  PD++TYN +V   CK+ +   A+ ++ ++   G  P+ ITYNT++ SL 
Sbjct: 79  VLKTMVMSGLVPDVITYNMMVGGFCKRRQLRSAIDLLEDMSLSGCPPDVITYNTIIRSLF 138

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
             G +D   +           P +  Y ILI  + K+    RA+     M  + C PD+V
Sbjct: 139 DNGKFDQAVEFWRGQLRRGCLPYLIPYTILIELVWKHCGTVRALEVLEDMAIEGCYPDLV 198

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           TYN+++    KEG   +A  +++ +      P  ITYN+L+  L   G  ++   +   M
Sbjct: 199 TYNSLVNFASKEGKYEDAALIIYNILSHGMEPNAITYNSLLHSLCSCGLWDEVDEILAIM 258

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
            +    P  +T+  LI G C+   VE A++   ++           Y  ++  LCK   V
Sbjct: 259 KKTSHPPTVVTYNILINGLCKCGLVERAINFFVQMVSENCSPDIITYNTLLTALCKEGMV 318

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           D A+QV  L+  S   P    ++T++  +   G  +EA KL+ ++IE  +   G T
Sbjct: 319 DEALQVFVLLSDSNCSPGLITYNTVIDGLTRRGYMDEALKLYNQMIEKGIAPDGIT 374


>gi|302143623|emb|CBI22376.3| unnamed protein product [Vitis vinifera]
          Length = 554

 Score =  671 bits (1732), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 352/587 (59%), Positives = 419/587 (71%), Gaps = 50/587 (8%)

Query: 1   MGYTVVPPNSIIELHCLPNLQW--------CS----RQVSLQHGVVNNHRTQFYSQLR-D 47
           M  TV+   SI E+ CL   Q         CS    +   L   V  N +TQ Y Q + D
Sbjct: 1   MELTVIAHKSITEVPCLHGFQTDLTSASDRCSPVKSQAFQLNCSVNCNFKTQSYLQWKGD 60

Query: 48  LGAGRN-VSLKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLP 106
             + RN + L+C G   +VCIDRVN  DQ EWSS  +   V KKLR    +KK  + S  
Sbjct: 61  HVSRRNALLLRCIGQERSVCIDRVNGEDQ-EWSSGRYAFGVEKKLREQMSSKKYSNSSNS 119

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S DG FV NDE+TNN+ILQN CS+GKL +AS+LID+MARRNQIP F  CINLIRGLI+++
Sbjct: 120 SLDGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLE 179

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
             E+A++VL+IMVMSGG+PD ITYNM+VGGLCK+G +++AI LLDEMS+SGC PD ITYN
Sbjct: 180 STERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYN 239

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           TILR MFD+G F QAIGFWKDQLRKGCP YLITYT+LIE VCK CG  +A+EVL+DMAIE
Sbjct: 240 TILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIE 299

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GC PDIVTYNSLVN++CKQGKY+D  L+I NLLS GM PN++TYNTLLHSL + G WD V
Sbjct: 300 GCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEV 359

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           D+IL IMN  S  PTV TYNILINGLCKYGL+DRAIN F+QMVS NC PDI+TYNT+L A
Sbjct: 360 DEILLIMNTTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAA 419

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LCKEGM++EAL LLH LN + CSP LITYN +IDGLAKKGCMEKAM LYG+M+E G +PD
Sbjct: 420 LCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMELYGEMIERGFAPD 479

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           DITHRTL WG  R D VE+A+ +LKE+ KR  +++NSA+R VIHGLC +           
Sbjct: 480 DITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFRFVIHGLCAA----------- 528

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
                                   GM EEA +L QKL E KVF + T
Sbjct: 529 ------------------------GMIEEANQLHQKLTELKVFREET 551


>gi|356574876|ref|XP_003555569.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Glycine max]
          Length = 589

 Score =  669 bits (1726), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 327/588 (55%), Positives = 422/588 (71%), Gaps = 13/588 (2%)

Query: 1   MGYTVVPPNSIIELHCLPNLQWCSRQVS--------LQHGVVNNHRTQFYSQLRDLGAGR 52
           MG+     ++I   H L  L  C++Q S        L H +     T       D  +  
Sbjct: 1   MGHIATLQHNIFSFHSLNGLHICNKQESCILGACSALDHSLRKKTPTLHRICFGDYFSTT 60

Query: 53  NVS-----LKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPS 107
             S     L+CR    +V IDR NEVD ++W   S  +   +  R L  +KKS +    S
Sbjct: 61  KYSIPWKGLRCRSFQRSVLIDRANEVDHEDWCFGSDYVGERRNSRELLDSKKSVNSPTLS 120

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
            + PFV+NDE TNN+ILQ  CSRGKLT A++LID+MAR++QIP F  C NLIRG IR   
Sbjct: 121 PEAPFVQNDEMTNNEILQRLCSRGKLTVAARLIDVMARKSQIPHFPSCTNLIRGFIRKGL 180

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +++A K L  MVMSGGVPDTITYNM++GGLCK G++RSA+ L+++MS+SGC PD ITYN+
Sbjct: 181 VDEACKTLNKMVMSGGVPDTITYNMVIGGLCKNGRLRSALDLVEDMSLSGCSPDAITYNS 240

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           I+R +FD G F QA+ FW+DQLRKGCPPYLITYT+LIE VCK CG ARA+EVL+DMA+EG
Sbjct: 241 IIRCLFDKGNFNQAVNFWRDQLRKGCPPYLITYTVLIELVCKYCGAARALEVLEDMAMEG 300

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           C PDIVTYNSLVN + KQGKY+D  LVI NLLS GM+PN++TYNTL+HSL + G WD VD
Sbjct: 301 CYPDIVTYNSLVNLTSKQGKYEDTALVILNLLSHGMQPNAVTYNTLIHSLINHGYWDEVD 360

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            IL IMNE S  PT  TYNIL+NGLCK GL+DRAI+ ++ MV++NC PDI+TYNT+L  L
Sbjct: 361 DILKIMNETSSPPTHVTYNILLNGLCKSGLLDRAISFYSTMVTENCSPDIITYNTLLSGL 420

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CKEG ++E +QLL+LL G+SCSP L+TYN +IDGLA+ G ME A  LY +M++ GI PD+
Sbjct: 421 CKEGFIDEGIQLLNLLVGTSCSPGLVTYNIVIDGLARLGSMESAKELYDEMVDKGIIPDE 480

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           ITH +L WGFCRADQ+EEA +LLKE+  +  +++N+AYR VI GLC+ KKVD+AIQVL+L
Sbjct: 481 ITHSSLTWGFCRADQLEEATELLKEMSMKEQRIKNTAYRCVILGLCRQKKVDIAIQVLDL 540

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           M+  +  PD+ ++S ++K VAD GM +EA  L Q LI+WK+ +K   L
Sbjct: 541 MVKGQCNPDERIYSALIKAVADGGMLKEANDLHQTLIKWKILKKEIML 588


>gi|449449679|ref|XP_004142592.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
 gi|449516715|ref|XP_004165392.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Cucumis sativus]
          Length = 594

 Score =  654 bits (1687), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 321/528 (60%), Positives = 408/528 (77%), Gaps = 5/528 (0%)

Query: 48  LGAGRNVS-LKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKK---SHDP 103
           LG GR    L  +GL  +VCIDRV++  +DE +   H + V +      +TKK   SH+ 
Sbjct: 65  LGLGRKQRVLHFKGLQRSVCIDRVDDTYEDELALNGHEIKVERNFSE-KLTKKRFGSHNC 123

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           S    DGPFV NDE+TNN ILQ FC +GKL +AS+++DIMA RNQIPDF  CIN+IRG +
Sbjct: 124 SSLYLDGPFVGNDEETNNVILQKFCYKGKLMEASRVVDIMASRNQIPDFECCINMIRGFV 183

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
             DR++KA +VL+IMVMSGGVPD ITYNM++G LCK+G + SAI LL++MS+SGC PDVI
Sbjct: 184 NTDRMDKAVQVLKIMVMSGGVPDIITYNMVIGCLCKQGHLESAIELLNDMSLSGCPPDVI 243

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           TYN ++R MFDNG F QA+ FWK+QLRKG PPYLITYTILIE V K  G   A+EVL++M
Sbjct: 244 TYNAVIRHMFDNGCFDQAVEFWKEQLRKGTPPYLITYTILIELVWKHRGTVCALEVLEEM 303

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
           A EGC PD+VTYNSL+N +CKQGK++DA LVI+NLL  GM P+++TYNTLLHSL  RG W
Sbjct: 304 ANEGCYPDLVTYNSLINLTCKQGKFEDAALVIDNLLFHGMVPDAVTYNTLLHSLSRRGHW 363

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           D VD+IL IM+ +   PTV T N+LINGLCK GL+D AIN  NQM S NC PDI+TYNT+
Sbjct: 364 DEVDEILKIMSISLQPPTVVTCNVLINGLCKNGLLDSAINFLNQMFSYNCLPDIITYNTL 423

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           LGALCKEGM++EA QLLHLL  ++CSP LI+YNT++DGL++KG M+KAM LY QMMENGI
Sbjct: 424 LGALCKEGMVDEAFQLLHLLTDTACSPGLISYNTVLDGLSRKGYMDKAMSLYSQMMENGI 483

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PDD THR++IWGFCR+++  EAV+ LK I K G ++ +S YR+++H LC +KKVD+AIQ
Sbjct: 484 IPDDTTHRSIIWGFCRSNKFVEAVETLKGILKGGYEVNSSFYRILVHELCLNKKVDLAIQ 543

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           VLE+M+SS  K ++T++STI+  +A  G+ E+A +L QKLIEWKV  K
Sbjct: 544 VLEMMLSSPCKSNETIYSTIINSIASAGLKEQADELRQKLIEWKVLGK 591


>gi|147789723|emb|CAN67400.1| hypothetical protein VITISV_025966 [Vitis vinifera]
          Length = 550

 Score =  647 bits (1670), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 332/520 (63%), Positives = 396/520 (76%), Gaps = 15/520 (2%)

Query: 1   MGYTVVPPNSIIELHCLPNLQW--------CS----RQVSLQHGVVNNHRTQFYSQLR-D 47
           M  TV+   SI E+ CL   Q         CS    +   L   V  N +TQ Y Q + D
Sbjct: 1   MELTVIAHKSITEVPCLHGFQTDLSSASDRCSPVKSQAFHLNCSVNCNFKTQSYLQWKGD 60

Query: 48  LGAGRN-VSLKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLP 106
             + RN + L+C G   +VCIDRVN  DQ EWSS  +   V KKLR    +KK  + S  
Sbjct: 61  HVSRRNALLLRCIGQERSVCIDRVNGEDQ-EWSSGRYAFGVEKKLREQMSSKKYSNSSNS 119

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S DG FV NDE+TNN+ILQN CS+GKL +AS+LID+MARRNQIP F  CINLIRGLI+++
Sbjct: 120 SFDGSFVGNDEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLE 179

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
             E+A++VL+IMVMSGG+PD ITYNM+VGGLCK+G +++AI LLDEMS+SGC PD ITYN
Sbjct: 180 STERATRVLKIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYN 239

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           TILR MFD+G F QAIGFWKDQLRKGCP YLITYT+LIE VCK CG  +A+EVL+DMAIE
Sbjct: 240 TILRCMFDHGGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIE 299

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GC PDIVTYNSLVN++CKQGKY+D  L+I NLLS GM PN++TYNTLLHSL + G WD V
Sbjct: 300 GCYPDIVTYNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEV 359

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           D+IL IMN  S  PTV TYNILINGLCKYGL+DRAIN F+QMVS NC PDI+TYNT+L A
Sbjct: 360 DEILLIMNMTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAA 419

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LCKEGM++EAL LLH LN + CSP LITYN +IDGLAKKGCMEKAM LYG+M+E G +PD
Sbjct: 420 LCKEGMVDEALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERGFAPD 479

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
           DITHRTL WG  R D VE+A+ +LKE+ KR  +++NSA+R
Sbjct: 480 DITHRTLFWGLFRLDLVEDALVILKEMNKRNQRIKNSAFR 519



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/379 (29%), Positives = 196/379 (51%), Gaps = 2/379 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D  T N ++  LC +G++ +A  L+D M+     P   +   ++R +      ++A    
Sbjct: 129 DEETNNEILQNLCSKGKLVNASRLIDVMARRNQIPYFPSCINLIRGLIKLESTERATRVL 188

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           K  +  G  P +ITY +L+  +CK+  +  AIE+LD+M++ GC PD +TYN+++      
Sbjct: 189 KIMVMSGGIPDIITYNMLVGGLCKKGLLKTAIELLDEMSLSGCPPDAITYNTILRCMFDH 248

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR-GCWDAVDKILDIMNEASHSPTVFT 364
           G +D A+    + L +G     ITY  L+  +    G   A++ + D+  E  + P + T
Sbjct: 249 GGFDQAIGFWKDQLRKGCPAYLITYTVLIELVCKHCGTVQAMEVLEDMAIEGCY-PDIVT 307

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN L+N  CK G  +        ++S    P+ VTYNT+L +LC  G  +E  ++L ++N
Sbjct: 308 YNSLVNYTCKQGKYEDTALIIYNLLSHGMGPNTVTYNTLLHSLCTHGYWDEVDEILLIMN 367

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
            +S  P ++TYN LI+GL K G +++A+  + QM+ +   PD IT+ TL+   C+   V+
Sbjct: 368 MTSQPPTVVTYNILINGLCKYGLLDRAINFFDQMVSHNCLPDIITYNTLLAALCKEGMVD 427

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA+ LL  +           Y +VI GL K   ++ A+ +   MI   + PDD    T+ 
Sbjct: 428 EALHLLHSLNDTRCSPGLITYNIVIDGLAKKGCMEKAMGLYGEMIERGFAPDDITHRTLF 487

Query: 545 KKVADDGMTEEAYKLWQKL 563
             +    + E+A  + +++
Sbjct: 488 WGLFRLDLVEDALVILKEM 506


>gi|297849166|ref|XP_002892464.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338306|gb|EFH68723.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 555

 Score =  638 bits (1646), Expect = e-180,   Method: Compositional matrix adjust.
 Identities = 306/518 (59%), Positives = 401/518 (77%), Gaps = 8/518 (1%)

Query: 55  SLKCRGLPGNVCIDRVNEVD-QDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFV 113
           +L+C GL  +VCID V +VD   E SSE H   V   LR       +      SSDGP  
Sbjct: 44  NLRCHGLMTSVCIDNVADVDDHAERSSEFHHYGVGNNLR-------ARKQLGLSSDGPIT 96

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           ENDE+TNN+IL N CS GKLTDA KL+++MAR NQ+P F  C NL+RGL RID+++KA  
Sbjct: 97  ENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARIDQLDKAMV 156

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+IMVMSGGVPDTITYNM++G LCK+G IRSA+ LL++MS+SG  PDVITYNT++R MF
Sbjct: 157 ILRIMVMSGGVPDTITYNMIIGNLCKKGHIRSALVLLEDMSLSGSPPDVITYNTVIRCMF 216

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           D+G  +QAI FWKDQLR GCPPY+ITYT+L+E VC+ CG ARA++VL+DMA+EGC PDIV
Sbjct: 217 DHGNAEQAIRFWKDQLRNGCPPYMITYTVLVELVCRYCGSARAMDVLEDMAVEGCYPDIV 276

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYNSLVN++C++G  ++  LVI ++LS G+E N++TYNTLLHSL S   WD V++IL+IM
Sbjct: 277 TYNSLVNYNCRRGNLEEVALVIQHILSHGLELNTVTYNTLLHSLCSNEYWDEVEEILNIM 336

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            + S+ PTV TYNILINGLCK  L+ RAI+ F QM+ + C PDIVTYNT+LGA+ KEGM+
Sbjct: 337 YQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTLLGAMSKEGMV 396

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           ++A++LL LL  +SC P LITYN++IDGLA+KG M+KA+ LY  M++ GISPDDIT R+L
Sbjct: 397 DDAIELLGLLKSTSCLPGLITYNSVIDGLARKGLMKKALELYHHMLDAGISPDDITRRSL 456

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I+GFCRA+ VEEA  +LKE   RGN +R S YRLVI GLCK ++++MAI+V+E+M++S  
Sbjct: 457 IYGFCRANLVEEASQVLKETSNRGNGIRGSTYRLVIQGLCKKREMEMAIEVVEIMLTSGC 516

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           KPD+T+++ IVK V + GM  EA +L +KL +WK+  +
Sbjct: 517 KPDETIYTAIVKGVEEMGMGSEAVQLQKKLTQWKLLRE 554


>gi|15223266|ref|NP_172337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75262899|sp|Q9FRS4.1|PPR22_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g08610
 gi|9802579|gb|AAF99781.1|AC003981_31 F22O13.9 [Arabidopsis thaliana]
 gi|332190196|gb|AEE28317.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  625 bits (1613), Expect = e-176,   Method: Compositional matrix adjust.
 Identities = 301/511 (58%), Positives = 391/511 (76%), Gaps = 5/511 (0%)

Query: 46  RDLGAGRNVSLKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSL 105
           +++G  ++V  +C GL  +VCID VN  D  E SSE H   V   LR      K    S 
Sbjct: 38  QEIGLKKDVFFRCHGLLSSVCIDNVN--DHAERSSEFHHYGVGTNLRARVKPMKQFGLS- 94

Query: 106 PSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRI 165
             SDGP  ENDE+TNN+IL N CS GKLTDA KL+++MAR NQ+P F  C NL+RGL RI
Sbjct: 95  --SDGPITENDEETNNEILHNLCSNGKLTDACKLVEVMARHNQVPHFPSCSNLVRGLARI 152

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           D+++KA  +L++MVMSGGVPDTITYNM++G LCK+G IR+A+ LL++MS+SG  PDVITY
Sbjct: 153 DQLDKAMCILRVMVMSGGVPDTITYNMIIGNLCKKGHIRTALVLLEDMSLSGSPPDVITY 212

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           NT++R MFD G  +QAI FWKDQL+ GCPP++ITYT+L+E VC+ CG ARAIEVL+DMA+
Sbjct: 213 NTVIRCMFDYGNAEQAIRFWKDQLQNGCPPFMITYTVLVELVCRYCGSARAIEVLEDMAV 272

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           EGC PDIVTYNSLVN++C++G  ++   VI ++LS G+E N++TYNTLLHSL S   WD 
Sbjct: 273 EGCYPDIVTYNSLVNYNCRRGNLEEVASVIQHILSHGLELNTVTYNTLLHSLCSHEYWDE 332

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
           V++IL+IM + S+ PTV TYNILINGLCK  L+ RAI+ F QM+ + C PDIVTYNTVLG
Sbjct: 333 VEEILNIMYQTSYCPTVITYNILINGLCKARLLSRAIDFFYQMLEQKCLPDIVTYNTVLG 392

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           A+ KEGM+++A++LL LL  + C P LITYN++IDGLAKKG M+KA+ LY QM++ GI P
Sbjct: 393 AMSKEGMVDDAIELLGLLKNTCCPPGLITYNSVIDGLAKKGLMKKALELYHQMLDAGIFP 452

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           DDIT R+LI+GFCRA+ VEEA  +LKE   RGN +R S YRLVI GLCK K+++MAI+V+
Sbjct: 453 DDITRRSLIYGFCRANLVEEAGQVLKETSNRGNGIRGSTYRLVIQGLCKKKEIEMAIEVV 512

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           E+M++   KPD+T+++ IVK V + GM  EA
Sbjct: 513 EIMLTGGCKPDETIYTAIVKGVEEMGMGSEA 543


>gi|357441367|ref|XP_003590961.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480009|gb|AES61212.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 573

 Score =  595 bits (1533), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 288/524 (54%), Positives = 384/524 (73%), Gaps = 9/524 (1%)

Query: 56  LKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITK--KSHDPSLPSSDGPFV 113
           L+CR     V  DRV+EVD ++W  ES+     K++    +     S + S  S++G FV
Sbjct: 54  LRCR----TVLSDRVDEVDHEDWGFESNT---GKRVESSELVHLVTSLNSSTLSAEGQFV 106

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
            N E T+NKILQ+ CSRGKLT A++L+++MAR +QIP F  C NLIRGLIRI +++K  K
Sbjct: 107 RNGELTSNKILQSLCSRGKLTAAARLVEVMARMSQIPHFPSCTNLIRGLIRIGQVDKGCK 166

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++ +MVMSGGVPDTIT+N ++G LCKRG ++SA+  L+ MS+SGC PD  TYNTI+R +F
Sbjct: 167 IMNMMVMSGGVPDTITFNAVIGSLCKRGHLKSALEFLEGMSLSGCLPDAKTYNTIIRCIF 226

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           D G    A+ FWKDQLRKG PPYLITY +L+E VCK CG +RA+EVL+DMA EGC PDI 
Sbjct: 227 DKGDPNLAVSFWKDQLRKGFPPYLITYALLVELVCKHCGASRALEVLEDMAREGCCPDIN 286

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            YNSLVNFS KQG Y D  LVI+NLLS GM+PN +TYN L+HSL   G  D VD IL IM
Sbjct: 287 MYNSLVNFSSKQGNYKDTALVISNLLSHGMQPNVVTYNILIHSLSLHGYSDVVDDILKIM 346

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           NE S SPT+ TYNIL+N LCK G +DR+I+ + +MVS+NC PDIVTYNT+L ALCKEG +
Sbjct: 347 NETSISPTLVTYNILLNSLCKSGFLDRSISLYIKMVSENCSPDIVTYNTLLNALCKEGFI 406

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +E++QLLH L+G++CSP L+TYN +I+GLA+   ++ A  +YG+M+E GI PD ITHRTL
Sbjct: 407 DESIQLLHSLSGTNCSPGLVTYNIVINGLARMRSIKSAKEMYGEMVEKGIDPDYITHRTL 466

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           +WG C+  Q EEAV++ K + + G K++  AY+ VI GLC+ KK+D AIQ L+LM+ ++ 
Sbjct: 467 VWGLCQVYQFEEAVEIFKVMHRIGQKIKGYAYKCVILGLCEQKKLDSAIQALDLMVKAQC 526

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           KPD  ++ T++K VA++GM  EA  L Q+LIE K+ + G  ++ 
Sbjct: 527 KPDGKIYYTLLKSVANEGMVNEANDLHQRLIELKILKDGCLIVG 570


>gi|255561941|ref|XP_002521979.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538783|gb|EEF40383.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 496

 Score =  511 bits (1316), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 261/455 (57%), Positives = 336/455 (73%), Gaps = 9/455 (1%)

Query: 47  DLGAGRNV-SLKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSL 105
           DL +GR +  L+C+GL  +V ID+V++ D D+WSSE+ VL V +K R    TK    P  
Sbjct: 28  DLHSGRTLFPLQCKGLQKSVSIDKVDKNDHDDWSSETLVLDVGRKFREQMNTKNHVSPK- 86

Query: 106 PSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRI 165
              +GPFVEN+E+ NN+ILQ+ C++G+L DA +LID+MARR+QIP+F  C NLIRG I++
Sbjct: 87  SYIEGPFVENEEEINNEILQHLCNKGRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKV 146

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           D+I KA+++L+IMVMSGGVPD ITYNMMVGGLCKRG+++SAI LL++MS+SGC PDV+TY
Sbjct: 147 DQINKAARILKIMVMSGGVPDVITYNMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTY 206

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           NTI+R MF N  F QA+ FWK+QLR+GCPPYLITYTILIE VCK CG  RA+EVL+DMAI
Sbjct: 207 NTIIRCMFHNANFDQAVRFWKEQLRRGCPPYLITYTILIELVCKHCGTVRAMEVLEDMAI 266

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           EGC PD+VTYNSLVNF+CKQGKY+DA L+I N+LS GMEPN+ITYNTLLHSL S G WD 
Sbjct: 267 EGCYPDLVTYNSLVNFTCKQGKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDE 326

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
           VD+IL +M E SH PTV TYN LINGLCK GLV+RAI+ F+QMV +NC PDIVTYNT+LG
Sbjct: 327 VDEILTVMKETSHPPTVVTYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLG 386

Query: 406 ALCKE-------GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           ALCKE           +A+++L  +           Y ++IDGL      + A+ +   M
Sbjct: 387 ALCKEECWMSPSSQFEDAVEILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIM 446

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           + +   PD+  +  LI     A  +EEA +L +++
Sbjct: 447 ISSRCKPDEEIYSALINSLADAGMMEEANELRQKL 481



 Score =  251 bits (640), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 140/387 (36%), Positives = 225/387 (58%), Gaps = 9/387 (2%)

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           LC +G++  A  L+D M+     P+      ++R      +  +A    K  +  G  P 
Sbjct: 108 LCNKGRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVMSGGVPD 167

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           +ITY +++  +CK+  +  AI++L+DM++ GC PD+VTYN+++        +D AV    
Sbjct: 168 VITYNMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMFHNANFDQAVRFWK 227

Query: 317 NLLSRGMEPNSITYNTLLHSLGSR-GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
             L RG  P  ITY  L+  +    G   A++ + D+  E  + P + TYN L+N  CK 
Sbjct: 228 EQLRRGCPPYLITYTILIELVCKHCGTVRAMEVLEDMAIEGCY-PDLVTYNSLVNFTCKQ 286

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G  + A      M+S   +P+ +TYNT+L +LC  G+ +E  ++L ++  +S  P ++TY
Sbjct: 287 GKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPPTVVTY 346

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD-------QVEEAVD 488
           NTLI+GL K G + +A+  + QM+     PD +T+ TL+   C+ +       Q E+AV+
Sbjct: 347 NTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLLGALCKEECWMSPSSQFEDAVE 406

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           +L+E+GKR +++ + AYR VI GLC +KK D+AIQVLE+MISSR KPD+ ++S ++  +A
Sbjct: 407 ILREMGKRDHRINSYAYRSVIDGLCNNKKTDIAIQVLEIMISSRCKPDEEIYSALINSLA 466

Query: 549 DDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           D GM EEA +L QKLI  KV +  + L
Sbjct: 467 DAGMMEEANELRQKLINIKVLKDQSIL 493



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/284 (26%), Positives = 142/284 (50%), Gaps = 6/284 (2%)

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           ++ +C +  +  A  ++D MA     P+     +L+    K  + + A  ++  ++  G 
Sbjct: 105 LQHLCNKGRLMDAPRLIDVMARRSQIPNFSCCTNLIRGFIKVDQINKAARILKIMVMSGG 164

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ ITYN ++  L  RG   +   +L+ M+ +   P V TYN +I  +      D+A+ 
Sbjct: 165 VPDVITYNMMVGGLCKRGKLKSAIDLLEDMSLSGCPPDVVTYNTIIRCMFHNANFDQAVR 224

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            + + + + C P ++TY  ++  +CK      A+++L  +    C P L+TYN+L++   
Sbjct: 225 FWKEQLRRGCPPYLITYTILIELVCKHCGTVRAMEVLEDMAIEGCYPDLVTYNSLVNFTC 284

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA---DQVEEAVDLLKEIGKRGNKM 500
           K+G  E A ++   M+ +G+ P+ IT+ TL+   C     D+V+E + ++KE       +
Sbjct: 285 KQGKYEDAALIIINMLSHGMEPNAITYNTLLHSLCSCGLWDEVDEILTVMKETSHPPTVV 344

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
               Y  +I+GLCKS  V+ AI     M+     PD   ++T++
Sbjct: 345 ---TYNTLINGLCKSGLVNRAIDFFHQMVYENCLPDIVTYNTLL 385


>gi|115482518|ref|NP_001064852.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|110289255|gb|AAP54273.2| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|110289256|gb|ABG66138.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113639461|dbj|BAF26766.1| Os10g0476900 [Oryza sativa Japonica Group]
 gi|215737151|dbj|BAG96080.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 599

 Score =  433 bits (1114), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 206/453 (45%), Positives = 311/453 (68%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L+ +C+ GKL  A  +ID M    QIP+   C+ +IRGL++  +  KA  VL++MV+SGG
Sbjct: 144 LRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMVLSGG 203

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           VPDTI+ NM++  LC+ GQ+ SA+ +L++M  SGC P  IT+NT++R MF+   + +AI 
Sbjct: 204 VPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYDRAIS 263

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
           FWK+QLR G PPY +T T+L++ VCK CG  +A+EVLD++++EGC PD+VTYN+L++ SC
Sbjct: 264 FWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASC 323

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K G+ +DA  ++  L + G+EPN  TY  LLH+L +   WD V  +L+ MN+ +  P V 
Sbjct: 324 KAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVT 383

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYNI IN  CKYG +D+AI+   +MV  NC PDIVT NT+L A+ K+GM+ EAL +   +
Sbjct: 384 TYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCI 443

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
             +     LITYNTLID LAKK  ++KAMVL+ +M+ +GISPDDIT+ +L+ GFC+ D  
Sbjct: 444 RENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKKDMA 503

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA+DLL ++   G +++ + + +VI  LC+  KV+ A ++ ++M+S    P +++ S+I
Sbjct: 504 DEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSI 563

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
           V KVA  G  +EA  L QKL+E ++ ++   ++
Sbjct: 564 VTKVAKSGWNKEAQMLHQKLVECEILKEDAEVI 596



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 170/387 (43%), Gaps = 35/387 (9%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y   LR   ++GK  QA     + +  G  P       +I  + K     +A  VL+ M 
Sbjct: 140 YADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKARHVLEVMV 199

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
           + G  PD ++ N L+   C+ G+   A+ V+ ++   G  P+ IT+NTL+  + ++  +D
Sbjct: 200 LSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRCMFNQRMYD 259

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
                          P   T  +L++ +CK     +A+   +++  + CQPD+VTYN ++
Sbjct: 260 RAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALI 319

Query: 405 GALCKEGMLNEA-----------------------------------LQLLHLLNGSSCS 429
            A CK G LN+A                                     LL  +N  +  
Sbjct: 320 SASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRD 379

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P + TYN  I+   K G +++A+ +  +M+ N  SPD +T  TL+    +   VEEA+ +
Sbjct: 380 PDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGI 439

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            + I + G K+    Y  +I  L K  +V  A+ + + M+S    PDD  + ++V     
Sbjct: 440 ARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCK 499

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTTLL 576
             M +EA  L  +++      K TT +
Sbjct: 500 KDMADEALDLLNQMLTLGFEVKTTTFV 526



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/246 (30%), Positives = 129/246 (52%), Gaps = 2/246 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKV 174
           D  T N ++   C  G+L DA  ++  +A     P+   +CI L+  L  + R ++   +
Sbjct: 311 DVVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCI-LLHALCNMRRWDEVCDL 369

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+ M      PD  TYN+ +   CK G +  AI +L+ M ++ C PD++T NT+L  +  
Sbjct: 370 LEDMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISK 429

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G  ++A+G  +     G    LITY  LI+ + K+  + +A+ + D+M  +G SPD +T
Sbjct: 430 KGMVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDIT 489

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y SLV   CK+   D+A+ ++N +L+ G E  + T+  ++ +L   G  +A  +I  +M 
Sbjct: 490 YGSLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVML 549

Query: 355 EASHSP 360
             +  P
Sbjct: 550 SKNSIP 555



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 142/308 (46%), Gaps = 7/308 (2%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E T+  ++   C       A +++D ++     PD      LI    +  R+  A  +L 
Sbjct: 277 EMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPDVVTYNALISASCKAGRLNDAKFILT 336

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            +   G  P+  TY +++  LC   +      LL++M+    +PDV TYN  +      G
Sbjct: 337 RLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLEDMNQVNRDPDVTTYNIFINYFCKYG 396

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
              QAI   +  +   C P ++T   L+  + K+  +  A+ +   +   G    ++TYN
Sbjct: 397 HLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIARCIRENGYKLVLITYN 456

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L++   K+ +   A+++ + +LS G+ P+ ITY +L+     +   D  D+ LD++N+ 
Sbjct: 457 TLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKK---DMADEALDLLNQM 513

Query: 357 ---SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                     T+ ++I  LC+ G V+ A      M+SKN  P     ++++  + K G  
Sbjct: 514 LTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLCSSIVTKVAKSGWN 573

Query: 414 NEALQLLH 421
            EA Q+LH
Sbjct: 574 KEA-QMLH 580



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 50/204 (24%), Positives = 90/204 (44%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N  +  FC  G L  A  +++ M   N  PD   C  L+  + +   +E+A  + 
Sbjct: 381 DVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKGMVEEALGIA 440

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + +  +G     ITYN ++  L K+ +++ A+ L DEM   G  PD ITY +++      
Sbjct: 441 RCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYGSLVMGFCKK 500

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A+      L  G      T+ ++I+ +C+   +  A E+   M  +   P     
Sbjct: 501 DMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSKNSIPGNSLC 560

Query: 296 NSLVNFSCKQGKYDDAVLVINNLL 319
           +S+V    K G   +A ++   L+
Sbjct: 561 SSIVTKVAKSGWNKEAQMLHQKLV 584


>gi|125575133|gb|EAZ16417.1| hypothetical protein OsJ_31886 [Oryza sativa Japonica Group]
          Length = 678

 Score =  432 bits (1110), Expect = e-118,   Method: Compositional matrix adjust.
 Identities = 208/465 (44%), Positives = 315/465 (67%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F ++  K     L+ +C+ GKL  A  +ID M    QIP+   C+ +IRGL++  +  KA
Sbjct: 211 FSKHGGKCYADNLRRYCNSGKLIQACCVIDEMVLHGQIPETKCCVRIIRGLVKTGKANKA 270

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             VL++MV+SGGVPDTI+ NM++  LC+ GQ+ SA+ +L++M  SGC P  IT+NT++R 
Sbjct: 271 RHVLEVMVLSGGVPDTISCNMLIAQLCRGGQLSSALQVLEDMRFSGCSPSGITFNTLIRC 330

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           MF+   + +AI FWK+QLR G PPY +T T+L++ VCK CG  +A+EVLD++++EGC PD
Sbjct: 331 MFNQRMYDRAISFWKEQLRLGWPPYEMTSTLLVDLVCKNCGPQKALEVLDELSLEGCQPD 390

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VTYN+L++ SCK G+ +DA  ++  L + G+EPN  TY  LLH+L +   WD V  +L+
Sbjct: 391 VVTYNALISASCKAGRLNDAKFILTRLAAEGLEPNGTTYCILLHALCNMRRWDEVCDLLE 450

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            MN+ +  P V TYNI IN  CKYG +D+AI+   +MV  NC PDIVT NT+L A+ K+G
Sbjct: 451 DMNQVNRDPDVTTYNIFINYFCKYGHLDQAIDVLERMVINNCSPDIVTCNTLLNAISKKG 510

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           M+ EAL +   +  +     LITYNTLID LAKK  ++KAMVL+ +M+ +GISPDDIT+ 
Sbjct: 511 MVEEALGIARCIRENGYKLVLITYNTLIDALAKKAEVKKAMVLFDEMLSDGISPDDITYG 570

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +L+ GFC+ D  +EA+DLL ++   G +++ + + +VI  LC+  KV+ A ++ ++M+S 
Sbjct: 571 SLVMGFCKKDMADEALDLLNQMLTLGFEVKTTTFVMVIQALCRDGKVEAAAEITKVMLSK 630

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
              P +++ S+IV KVA  G  +EA  L QKL+E ++ ++   ++
Sbjct: 631 NSIPGNSLCSSIVTKVAKSGWNKEAQMLHQKLVECEILKEDAEVI 675


>gi|357140650|ref|XP_003571877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08610-like [Brachypodium distachyon]
          Length = 753

 Score =  429 bits (1102), Expect = e-117,   Method: Compositional matrix adjust.
 Identities = 207/453 (45%), Positives = 309/453 (68%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L+ +C+ GKL  A  +ID M    QIPD   CI LIRGL++  +  KA +VL++MV+SGG
Sbjct: 298 LRRYCNNGKLIQACCVIDEMVLHGQIPDSKCCIRLIRGLVKTGKANKARQVLEVMVLSGG 357

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           +PDTIT NM++  LC+ GQ+ SA+++L++M  SG  P+ IT+NT++R M +   + +AI 
Sbjct: 358 IPDTITCNMLIAQLCRGGQLSSAMSVLEDMRYSGTSPNGITFNTLIRCMCNQHMYDKAIT 417

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
           FWK+QLR G PPY++T T+L++ +CK+CG  RA+EVLD++++EGC PD+VTYN+L++ SC
Sbjct: 418 FWKEQLRIGWPPYVMTNTLLVDLICKKCGSKRAMEVLDELSLEGCQPDVVTYNALISASC 477

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K  +  DA  ++  L++ G+EPNS TY  LLHSL ++  W  V  +L  M  A+  P V 
Sbjct: 478 KADRLKDAKTILTRLIAEGLEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVT 537

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
            YNI IN  CKYG +D+AI+   +MVS  C PDIVTYNT+L A+ KEGM+ EAL + H +
Sbjct: 538 AYNIFINYFCKYGHLDQAIDVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFI 597

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
             +     LITYNTLID LA KG ++KAMVL+ +M    ISPDDIT+ +L+ GFC+ +  
Sbjct: 598 RQNGWQLVLITYNTLIDALANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMS 657

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           EEA++LL      G +++ + + +VI  LC+  KV+ A ++L +M+S     + + + +I
Sbjct: 658 EEALELLNRTLALGFQVKTTTFIMVIQALCRDGKVEAAAEILRVMVSETNNTNSSFYLSI 717

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
           V++VA  G  EEA +L Q+LI+ K+ +K + ++
Sbjct: 718 VRRVAKSGRIEEAERLHQELIDCKILKKDSLVV 750



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 106/229 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T   +L + C++ +  +   L+  M R N  PD       I    +   +++A 
Sbjct: 497 LEPNSTTYCILLHSLCNKRRWAEVCDLLAHMKRANCEPDVTAYNIFINYFCKYGHLDQAI 556

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL+ MV     PD +TYN ++  + K G +  A+ +   +  +G +  +ITYNT++  +
Sbjct: 557 DVLEKMVSDKCCPDIVTYNTLLNAISKEGMVEEALVIAHFIRQNGWQLVLITYNTLIDAL 616

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            + G+ K+A+  + +       P  ITY  L+   CK+     A+E+L+     G     
Sbjct: 617 ANKGEVKKAMVLFDEMASGRISPDDITYGSLVMGFCKKNMSEEALELLNRTLALGFQVKT 676

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
            T+  ++   C+ GK + A  ++  ++S     NS  Y +++  +   G
Sbjct: 677 TTFIMVIQALCRDGKVEAAAEILRVMVSETNNTNSSFYLSIVRRVAKSG 725


>gi|242034189|ref|XP_002464489.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
 gi|241918343|gb|EER91487.1| hypothetical protein SORBIDRAFT_01g019340 [Sorghum bicolor]
          Length = 585

 Score =  420 bits (1080), Expect = e-115,   Method: Compositional matrix adjust.
 Identities = 199/476 (41%), Positives = 307/476 (64%)

Query: 101 HDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIR 160
           H+    ++   F ++  +     L+  C+ GKL  A ++ID M    Q+PD   C+ LIR
Sbjct: 107 HNSDKATNGAYFSKHKAECYADSLRRHCNNGKLIQACRVIDEMVLHGQVPDSKCCVRLIR 166

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
           GL+R  +  KA  VL++MV+SGGVPDTIT NM++  LC  GQ+ SA+ +L++M  +GC P
Sbjct: 167 GLVRTGKTNKARHVLEVMVLSGGVPDTITCNMLIARLCCEGQLSSAMKVLEDMRFTGCSP 226

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
             IT+NT++R M  +  + +AI FWK+QL+ G PPY +T T+L++ +CK+CG  RA+EVL
Sbjct: 227 SGITFNTLIRCMCSHHMYDRAISFWKEQLKLGWPPYEMTSTLLVDLICKKCGPMRALEVL 286

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           D++ +EGC PD+V+YN+L++ SCK G   +A L++ +L + G+EPN  TY  LLHSL  +
Sbjct: 287 DELGLEGCQPDVVSYNTLISVSCKAGCLKNAKLILTHLSAEGLEPNGTTYCILLHSLCDK 346

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
             W  V  +L  M +A+H P V  YNI IN  C+YG +D+AI+    MV++ C PDIVTY
Sbjct: 347 RRWSEVGDLLAHMKQANHKPDVTAYNIFINYFCRYGYLDQAIDVLEVMVNEKCFPDIVTY 406

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           NT+L A+ K GM+ EAL + H +  + C    ITYNTLID LAKKG +  AM L+ +M  
Sbjct: 407 NTLLNAISKRGMVEEALGIFHSIRENGCQVVRITYNTLIDALAKKGEVINAMTLFDEMTV 466

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           +GISPDD+T+ +L+ GFC+ +  +EA++LL ++   G +++ + + ++I  LCK    + 
Sbjct: 467 DGISPDDVTYGSLVMGFCKKNMAKEALELLNQMLALGFEVKATTFSMMIQSLCKGCNTEA 526

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
           A ++L +M+S         + +IV +VA  G  +EA  L Q+L++ KV ++ +  +
Sbjct: 527 AAEILRVMVSRNVNHRSAFYLSIVTRVAKSGRVKEAQILHQELVQSKVLKEASQFI 582



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 66/267 (24%), Positives = 112/267 (41%), Gaps = 23/267 (8%)

Query: 56  LKCRGLPGN---VCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPF 112
           L   GL  N    CI   +  D+  WS    +LA  K+         +H P         
Sbjct: 324 LSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQ--------ANHKP--------- 366

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
              D    N  +  FC  G L  A  ++++M      PD      L+  + +   +E+A 
Sbjct: 367 ---DVTAYNIFINYFCRYGYLDQAIDVLEVMVNEKCFPDIVTYNTLLNAISKRGMVEEAL 423

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   +  +G     ITYN ++  L K+G++ +A+ L DEM+V G  PD +TY +++   
Sbjct: 424 GIFHSIRENGCQVVRITYNTLIDALAKKGEVINAMTLFDEMTVDGISPDDVTYGSLVMGF 483

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                 K+A+      L  G      T++++I+ +CK C    A E+L  M     +   
Sbjct: 484 CKKNMAKEALELLNQMLALGFEVKATTFSMMIQSLCKGCNTEAAAEILRVMVSRNVNHRS 543

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLL 319
             Y S+V    K G+  +A ++   L+
Sbjct: 544 AFYLSIVTRVAKSGRVKEAQILHQELV 570


>gi|293333002|ref|NP_001168049.1| uncharacterized protein LOC100381779 [Zea mays]
 gi|223945693|gb|ACN26930.1| unknown [Zea mays]
 gi|414871082|tpg|DAA49639.1| TPA: hypothetical protein ZEAMMB73_603879 [Zea mays]
          Length = 582

 Score =  414 bits (1064), Expect = e-113,   Method: Compositional matrix adjust.
 Identities = 197/448 (43%), Positives = 294/448 (65%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L+  C+ GKL  A ++ID M    Q+PD   C+ LIRGL+R     KA  VL++MV+SGG
Sbjct: 130 LRRHCNNGKLIQACRIIDEMVLHGQVPDSKCCVRLIRGLVRTGNTNKARHVLEVMVLSGG 189

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           VPDTIT NM++G LC  GQ+ SA+ +L++M  +GC P  IT+NT++R M  +  + +A+ 
Sbjct: 190 VPDTITCNMLIGQLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHLYDRAVS 249

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
           FWK+QL+ G PPY +T T+L++ +CKQCG  RA+EVLD++ +EGC P +V+YN+L++ SC
Sbjct: 250 FWKEQLKIGWPPYEMTSTLLVDLICKQCGPMRALEVLDELDLEGCQPHVVSYNTLISASC 309

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K G   DA L++  L + G+EPN  TY  LLHSL  +  W  V  +L  M +A+H P V 
Sbjct: 310 KAGCLKDAKLILTRLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHKPDVT 369

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
            YNI IN  C+YG +D+AI+    MVS+ C PDIVTYNT+L A+ K GM+ EAL + H +
Sbjct: 370 AYNIFINYFCRYGHLDQAIDVLEMMVSEKCFPDIVTYNTLLNAISKRGMVQEALGIFHSI 429

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
             + C    ITYNTLID LAK+G +  AM L+ +M+ +GI+PDD+T+ +LI GFC+ +  
Sbjct: 430 RENGCQVVRITYNTLIDALAKRGDIINAMTLFDEMIVDGINPDDVTYGSLIMGFCKKNMA 489

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA++LL ++   G +++ + + ++I  LCK  K + A ++L +M+S         + +I
Sbjct: 490 KEALELLNQMLALGFEVKATTFSMMIQALCKGCKAEAAAEILRVMVSRNVNHRSAFYLSI 549

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           V +VA  G  +EA  L Q+L   +  ++
Sbjct: 550 VTRVAKSGRLKEAQILHQELYRARSLKR 577



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 89/332 (26%), Positives = 164/332 (49%), Gaps = 8/332 (2%)

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           ++GK      F K   + GC      Y   + + C    + +A  ++D+M + G  PD  
Sbjct: 108 NSGKVANRACFSKH--KTGC------YAYSLRRHCNNGKLIQACRIIDEMVLHGQVPDSK 159

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
               L+    + G  + A  V+  ++  G  P++IT N L+  L   G   +  K+L+ M
Sbjct: 160 CCVRLIRGLVRTGNTNKARHVLEVMVLSGGVPDTITCNMLIGQLCCEGQLSSAMKVLEDM 219

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                SP+  T+N LI  +C + L DRA++ + + +     P  +T   ++  +CK+   
Sbjct: 220 RFTGCSPSGITFNTLIRCMCSHHLYDRAVSFWKEQLKIGWPPYEMTSTLLVDLICKQCGP 279

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             AL++L  L+   C P +++YNTLI    K GC++ A ++  ++   G+ P+  T+  L
Sbjct: 280 MRALEVLDELDLEGCQPHVVSYNTLISASCKAGCLKDAKLILTRLSAEGLEPNGTTYCIL 339

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           +   C   +  E  DLL  + +  +K   +AY + I+  C+   +D AI VLE+M+S + 
Sbjct: 340 LHSLCDKRRWSEVGDLLAHMKQANHKPDVTAYNIFINYFCRYGHLDQAIDVLEMMVSEKC 399

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            PD   ++T++  ++  GM +EA  ++  + E
Sbjct: 400 FPDIVTYNTLLNAISKRGMVQEALGIFHSIRE 431



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 92/386 (23%), Positives = 164/386 (42%), Gaps = 35/386 (9%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y   LR   +NGK  QA     + +  G  P       LI  + +     +A  VL+ M 
Sbjct: 126 YAYSLRRHCNNGKLIQACRIIDEMVLHGQVPDSKCCVRLIRGLVRTGNTNKARHVLEVMV 185

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
           + G  PD +T N L+   C +G+   A+ V+ ++   G  P+ IT+NTL+  + S   +D
Sbjct: 186 LSGGVPDTITCNMLIGQLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHLYD 245

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
                     +    P   T  +L++ +CK     RA+   +++  + CQP +V+YNT++
Sbjct: 246 RAVSFWKEQLKIGWPPYEMTSTLLVDLICKQCGPMRALEVLDELDLEGCQPHVVSYNTLI 305

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSP-----CLI-------------------------- 433
            A CK G L +A  +L  L+     P     C++                          
Sbjct: 306 SASCKAGCLKDAKLILTRLSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQANHK 365

Query: 434 ----TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
                YN  I+   + G +++A+ +   M+     PD +T+ TL+    +   V+EA+ +
Sbjct: 366 PDVTAYNIFINYFCRYGHLDQAIDVLEMMVSEKCFPDIVTYNTLLNAISKRGMVQEALGI 425

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
              I + G ++    Y  +I  L K   +  A+ + + MI     PDD  + +++     
Sbjct: 426 FHSIRENGCQVVRITYNTLIDALAKRGDIINAMTLFDEMIVDGINPDDVTYGSLIMGFCK 485

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTTL 575
             M +EA +L  +++      K TT 
Sbjct: 486 KNMAKEALELLNQMLALGFEVKATTF 511



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 70/235 (29%), Positives = 123/235 (52%), Gaps = 4/235 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N ++   C  G L DA  ++  ++     P+   +CI L+  L    R  +   +L  M 
Sbjct: 302 NTLISASCKAGCLKDAKLILTRLSAEGLEPNGTTYCI-LLHSLCDKRRWSEVGDLLAHMK 360

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            +   PD   YN+ +   C+ G +  AI +L+ M    C PD++TYNT+L  +   G  +
Sbjct: 361 QANHKPDVTAYNIFINYFCRYGHLDQAIDVLEMMVSEKCFPDIVTYNTLLNAISKRGMVQ 420

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A+G +      GC    ITY  LI+ + K+  I  A+ + D+M ++G +PD VTY SL+
Sbjct: 421 EALGIFHSIRENGCQVVRITYNTLIDALAKRGDIINAMTLFDEMIVDGINPDDVTYGSLI 480

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC-WDAVDKILDIM 353
              CK+    +A+ ++N +L+ G E  + T++ ++ +L  +GC  +A  +IL +M
Sbjct: 481 MGFCKKNMAKEALELLNQMLALGFEVKATTFSMMIQAL-CKGCKAEAAAEILRVM 534



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 67/266 (25%), Positives = 109/266 (40%), Gaps = 23/266 (8%)

Query: 56  LKCRGLPGN---VCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPF 112
           L   GL  N    CI   +  D+  WS    +LA  K+         +H P         
Sbjct: 324 LSAEGLEPNGTTYCILLHSLCDKRRWSEVGDLLAHMKQ--------ANHKP--------- 366

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
              D    N  +  FC  G L  A  ++++M      PD      L+  + +   +++A 
Sbjct: 367 ---DVTAYNIFINYFCRYGHLDQAIDVLEMMVSEKCFPDIVTYNTLLNAISKRGMVQEAL 423

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   +  +G     ITYN ++  L KRG I +A+ L DEM V G  PD +TY +++   
Sbjct: 424 GIFHSIRENGCQVVRITYNTLIDALAKRGDIINAMTLFDEMIVDGINPDDVTYGSLIMGF 483

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                 K+A+      L  G      T++++I+ +CK C    A E+L  M     +   
Sbjct: 484 CKKNMAKEALELLNQMLALGFEVKATTFSMMIQALCKGCKAEAAAEILRVMVSRNVNHRS 543

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNL 318
             Y S+V    K G+  +A ++   L
Sbjct: 544 AFYLSIVTRVAKSGRLKEAQILHQEL 569



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 62/261 (23%), Positives = 108/261 (41%), Gaps = 17/261 (6%)

Query: 315 INNLLSRGMEP-NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           + NLL   ++P   + +N+    + +R C+            + H    + Y++  +  C
Sbjct: 91  LRNLLDEQLKPGRPLDHNS--GKVANRACF------------SKHKTGCYAYSLRRH--C 134

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
             G + +A    ++MV     PD      ++  L + G  N+A  +L ++  S   P  I
Sbjct: 135 NNGKLIQACRIIDEMVLHGQVPDSKCCVRLIRGLVRTGNTNKARHVLEVMVLSGGVPDTI 194

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           T N LI  L  +G +  AM +   M   G SP  IT  TLI   C     + AV   KE 
Sbjct: 195 TCNMLIGQLCCEGQLSSAMKVLEDMRFTGCSPSGITFNTLIRCMCSHHLYDRAVSFWKEQ 254

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            K G         L++  +CK      A++VL+ +     +P    ++T++      G  
Sbjct: 255 LKIGWPPYEMTSTLLVDLICKQCGPMRALEVLDELDLEGCQPHVVSYNTLISASCKAGCL 314

Query: 554 EEAYKLWQKLIEWKVFEKGTT 574
           ++A  +  +L    +   GTT
Sbjct: 315 KDAKLILTRLSAEGLEPNGTT 335


>gi|15218325|ref|NP_172461.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122215618|sp|Q3EDF8.1|PPR28_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09900
 gi|332190391|gb|AEE28512.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 598

 Score =  384 bits (985), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 202/503 (40%), Positives = 301/503 (59%), Gaps = 39/503 (7%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S +  F   D ++NN + Q     G+L +  K ++ M     +PD   C  LIRG  R+ 
Sbjct: 93  SVNSSFALEDVESNNHLRQ-MVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRLG 151

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           +  KA+K+L+I+  SG VPD ITYN+M+ G CK G+I +A+++LD MSVS   PDV+TYN
Sbjct: 152 KTRKAAKILEILEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYN 208

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           TILR++ D+GK KQA+      L++ C P +ITYTILIE  C+  G+  A+++LD+M   
Sbjct: 209 TILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGHAMKLLDEMRDR 268

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GC+PD+VTYN LVN  CK+G+ D+A+  +N++ S G +PN IT+N +L S+ S G W   
Sbjct: 269 GCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWMDA 328

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLV---------------------------- 378
           +K+L  M     SP+V T+NILIN LC+ GL+                            
Sbjct: 329 EKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPQHGCQPNSLSYNPLLHG 388

Query: 379 -------DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
                  DRAI    +MVS+ C PDIVTYNT+L ALCK+G + +A+++L+ L+   CSP 
Sbjct: 389 FCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCSPV 448

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           LITYNT+IDGLAK G   KA+ L  +M    + PD IT+ +L+ G  R  +V+EA+    
Sbjct: 449 LITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKFFH 508

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           E  + G +     +  ++ GLCKS++ D AI  L  MI+   KP++T ++ +++ +A +G
Sbjct: 509 EFERMGIRPNAVTFNSIMLGLCKSRQTDRAIDFLVFMINRGCKPNETSYTILIEGLAYEG 568

Query: 552 MTEEAYKLWQKLIEWKVFEKGTT 574
           M +EA +L  +L    + +K + 
Sbjct: 569 MAKEALELLNELCNKGLMKKSSA 591


>gi|297843788|ref|XP_002889775.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335617|gb|EFH66034.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  383 bits (983), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/494 (40%), Positives = 299/494 (60%), Gaps = 39/494 (7%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
             S++  FV  D ++NN + Q     G+L +  K ++ M     +PD   C  LIRG  R
Sbjct: 91  FSSANSSFVLEDVESNNHLRQ-LVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCR 149

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           + +  KA+K+L+++  SG VPD ITYN+M+ G CK G+I +A+++LD MSVS   PDV+T
Sbjct: 150 MGKTRKAAKILEVLEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVT 206

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YNTILR++ D+GK KQA+      L++ C P +ITYTILIE  C+  G+ +A+++LD+M 
Sbjct: 207 YNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAMKLLDEMR 266

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             GC+PD+VTYN LVN  CK+G+ D+A+  +N++ S G +PN IT+N +L S+ S G W 
Sbjct: 267 DRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSMCSTGRWM 326

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLV-------------------------- 378
             +K+L  M     SP+V T+NILIN LC+ GL+                          
Sbjct: 327 DAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNSLSYNPLL 386

Query: 379 ---------DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
                    DRAI    +MVS+ C PDIVTYNT+L ALCK+G + +A+++L+ L+   CS
Sbjct: 387 HGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQLSSKGCS 446

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P LITYNT+IDGLAK G   KA+ L  +M    + PD IT+ +L+ G  R  +V+EA+  
Sbjct: 447 PVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGKVDEAIKF 506

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             E  + G +     +  ++ GLCK+++ D AI  L  MI+   KP +T ++ +++ +A 
Sbjct: 507 FHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTILIEGLAY 566

Query: 550 DGMTEEAYKLWQKL 563
           +GM +EA +L  +L
Sbjct: 567 EGMAKEALELLNEL 580



 Score =  264 bits (674), Expect = 1e-67,   Method: Compositional matrix adjust.
 Identities = 139/396 (35%), Positives = 231/396 (58%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N IL++ C  GKL  A +++D M +R+  PD      LI    R   + +A 
Sbjct: 200 VSPDVVTYNTILRSLCDSGKLKQAMEVLDRMLQRDCYPDVITYTILIEATCRDSGVGQAM 259

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L  M   G  PD +TYN++V G+CK G++  AI  L++M  SGC+P+VIT+N ILR+M
Sbjct: 260 KLLDEMRDRGCTPDVVTYNVLVNGICKEGRLDEAIKFLNDMPSSGCQPNVITHNIILRSM 319

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G++  A     D LRKG  P ++T+ ILI  +C++  + RAI++L+ M   GC P+ 
Sbjct: 320 CSTGRWMDAEKLLADMLRKGFSPSVVTFNILINFLCRKGLLGRAIDILEKMPKHGCQPNS 379

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           ++YN L++  CK+ K D A+  +  ++SRG  P+ +TYNT+L +L   G  +   +IL+ 
Sbjct: 380 LSYNPLLHGFCKEKKMDRAIEYLERMVSRGCYPDIVTYNTMLTALCKDGKVEDAVEILNQ 439

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           ++    SP + TYN +I+GL K G   +AI   ++M +K+ +PD +TY++++G L +EG 
Sbjct: 440 LSSKGCSPVLITYNTVIDGLAKAGKTGKAIKLLDEMRAKDLKPDTITYSSLVGGLSREGK 499

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA++  H        P  +T+N+++ GL K    ++A+     M+  G  P + ++  
Sbjct: 500 VDEAIKFFHEFERMGVRPNAVTFNSIMLGLCKTRQTDRAIDFLVYMINRGCKPTETSYTI 559

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           LI G       +EA++LL E+  +G   R+SA ++ 
Sbjct: 560 LIEGLAYEGMAKEALELLNELCNKGLMKRSSAEQVA 595



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 36/137 (26%), Positives = 70/137 (51%), Gaps = 3/137 (2%)

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           +  N  +  L + G +E+       M+ +G  PD I   TLI GFCR  +  +A  +L+ 
Sbjct: 103 VESNNHLRQLVRTGELEEGFKFLENMVYHGNVPDIIPCTTLIRGFCRMGKTRKAAKILEV 162

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +   G       Y ++I G CK+ +++ A+ VL+ M  S   PD   ++TI++ + D G 
Sbjct: 163 LEGSGAVPDVITYNVMISGYCKAGEINNALSVLDRMSVS---PDVVTYNTILRSLCDSGK 219

Query: 553 TEEAYKLWQKLIEWKVF 569
            ++A ++  ++++   +
Sbjct: 220 LKQAMEVLDRMLQRDCY 236


>gi|225459022|ref|XP_002285611.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like isoform 1 [Vitis vinifera]
          Length = 610

 Score =  380 bits (977), Expect = e-103,   Method: Compositional matrix adjust.
 Identities = 200/486 (41%), Positives = 296/486 (60%), Gaps = 38/486 (7%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L+     G+L D  K ++ M  R  IPD   C +LIRG  RI + +KA+ V++I+  SG 
Sbjct: 121 LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 180

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           VPD ITYN+++ G CK G+I +A+ +LD M+V+   PDV+TYNTILRT+ D+GK KQA+ 
Sbjct: 181 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAME 237

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
               QL+K C P +ITYTILIE  CK+ G+ +A+++LD+M  +G  PD+VTYN L+N  C
Sbjct: 238 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 297

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K+G+ D+A+  +NN+ S G +PN IT+N +L S+ S G W   +K+L  M     SP+V 
Sbjct: 298 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 357

Query: 364 TYNILINGLCKYGLV-----------------------------------DRAINSFNQM 388
           T+NILIN LC+ GL+                                   DRAI   + M
Sbjct: 358 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 417

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           VS+ C PDIVTYNT+L ALCK+G ++ A+++L+ L+   CSP LITYNT+IDGL+K G  
Sbjct: 418 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 477

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E+A+ L  +M   G+ PD IT+ +L+ G  R  +V+EA+    ++   G +     Y  +
Sbjct: 478 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 537

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + GLCKS++ D AI  L  MIS R KP +  ++ +++ +A +G+ +EA  L  +L    +
Sbjct: 538 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 597

Query: 569 FEKGTT 574
            +K + 
Sbjct: 598 VKKSSA 603



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/408 (36%), Positives = 235/408 (57%)

Query: 102 DPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRG 161
           D +L   D   V  D  T N IL+  C  GKL  A +++D   ++   PD      LI  
Sbjct: 201 DNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEA 260

Query: 162 LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
             +   + +A K+L  M   G  PD +TYN+++ G+CK G++  AI  L+ M   GC+P+
Sbjct: 261 TCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 320

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           VIT+N ILR+M   G++  A     D LRKGC P ++T+ ILI  +C+Q  + RAI++L+
Sbjct: 321 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILE 380

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
            M + GC+P+ ++YN L++  CK+ K D A+  ++ ++SRG  P+ +TYNTLL +L   G
Sbjct: 381 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 440

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             D   +IL+ ++    SP + TYN +I+GL K G  +RAI   ++M  K  +PDI+TY+
Sbjct: 441 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 500

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           +++  L +EG ++EA++  H L G    P  ITYN+++ GL K    ++A+     M+  
Sbjct: 501 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 560

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
              P + T+  LI G       +EA+DLL E+  RG   ++SA ++ +
Sbjct: 561 RCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 608


>gi|147833323|emb|CAN61988.1| hypothetical protein VITISV_026694 [Vitis vinifera]
          Length = 553

 Score =  380 bits (976), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 200/486 (41%), Positives = 296/486 (60%), Gaps = 38/486 (7%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L+     G+L D  K ++ M  R  IPD   C +LIRG  RI + +KA+ V++I+  SG 
Sbjct: 64  LRRLVRNGELEDGFKFLESMVYRGDIPDIIPCTSLIRGFCRIGKTKKATWVMEILEQSGA 123

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           VPD ITYN+++ G CK G+I +A+ +LD M+V+   PDV+TYNTILRT+ D+GK KQA+ 
Sbjct: 124 VPDVITYNVLISGYCKSGEIDNALQVLDRMNVA---PDVVTYNTILRTLCDSGKLKQAME 180

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
               QL+K C P +ITYTILIE  CK+ G+ +A+++LD+M  +G  PD+VTYN L+N  C
Sbjct: 181 VLDRQLQKECYPDVITYTILIEATCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGIC 240

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K+G+ D+A+  +NN+ S G +PN IT+N +L S+ S G W   +K+L  M     SP+V 
Sbjct: 241 KEGRLDEAIKFLNNMPSYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVV 300

Query: 364 TYNILINGLCKYGLV-----------------------------------DRAINSFNQM 388
           T+NILIN LC+ GL+                                   DRAI   + M
Sbjct: 301 TFNILINFLCRQGLLGRAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIM 360

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           VS+ C PDIVTYNT+L ALCK+G ++ A+++L+ L+   CSP LITYNT+IDGL+K G  
Sbjct: 361 VSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKT 420

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E+A+ L  +M   G+ PD IT+ +L+ G  R  +V+EA+    ++   G +     Y  +
Sbjct: 421 ERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSI 480

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + GLCKS++ D AI  L  MIS R KP +  ++ +++ +A +G+ +EA  L  +L    +
Sbjct: 481 MLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGL 540

Query: 569 FEKGTT 574
            +K + 
Sbjct: 541 VKKSSA 546



 Score =  273 bits (697), Expect = 2e-70,   Method: Compositional matrix adjust.
 Identities = 147/408 (36%), Positives = 235/408 (57%)

Query: 102 DPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRG 161
           D +L   D   V  D  T N IL+  C  GKL  A +++D   ++   PD      LI  
Sbjct: 144 DNALQVLDRMNVAPDVVTYNTILRTLCDSGKLKQAMEVLDRQLQKECYPDVITYTILIEA 203

Query: 162 LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
             +   + +A K+L  M   G  PD +TYN+++ G+CK G++  AI  L+ M   GC+P+
Sbjct: 204 TCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPN 263

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           VIT+N ILR+M   G++  A     D LRKGC P ++T+ ILI  +C+Q  + RAI++L+
Sbjct: 264 VITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILE 323

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
            M + GC+P+ ++YN L++  CK+ K D A+  ++ ++SRG  P+ +TYNTLL +L   G
Sbjct: 324 KMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDG 383

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             D   +IL+ ++    SP + TYN +I+GL K G  +RAI   ++M  K  +PDI+TY+
Sbjct: 384 KVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYS 443

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           +++  L +EG ++EA++  H L G    P  ITYN+++ GL K    ++A+     M+  
Sbjct: 444 SLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISK 503

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
              P + T+  LI G       +EA+DLL E+  RG   ++SA ++ +
Sbjct: 504 RCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSAEQVAV 551


>gi|449527556|ref|XP_004170776.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Cucumis sativus]
          Length = 665

 Score =  372 bits (956), Expect = e-100,   Method: Compositional matrix adjust.
 Identities = 201/494 (40%), Positives = 300/494 (60%), Gaps = 38/494 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E  NN  L+     G+L +  K ++ M  R  IPD   C +LIRGL +  +  KA++V+
Sbjct: 109 EEVENNNHLRRLVRNGELEEGFKFLEDMVCRGDIPDIIACTSLIRGLCKTGKTWKATRVM 168

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +I+  SG VPD ITYN+++ G CK G+I SA+ LLD MSVS   PDV+TYNTILRT+ D+
Sbjct: 169 EILEDSGAVPDVITYNVLISGYCKTGEIGSALQLLDRMSVS---PDVVTYNTILRTLCDS 225

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK K+A+     Q+++ C P +ITYTILIE  CK+ G+ +A+++LD+M  +GC PD+VTY
Sbjct: 226 GKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTY 285

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK+G+ D+A+  +N++ S G +PN IT+N +L S+ S G W   +K L  M  
Sbjct: 286 NVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIR 345

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAIN---------------SFNQ------------- 387
              SP+V T+NILIN LC+ GL+ RAI+               S+N              
Sbjct: 346 KGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMER 405

Query: 388 -------MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                  MVS+ C PDIVTYNT+L ALCK+G ++ A+++L+ L    CSP LITYNT+ID
Sbjct: 406 AIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVID 465

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL+K G  + A+ L  +M   G+ PD IT+ TL+ G  R  +V+EA+    ++ + G K 
Sbjct: 466 GLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKP 525

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  ++ GLCK+++   AI  L  M++   KP +T +  +++ +A +G+ +EA +L 
Sbjct: 526 NAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELL 585

Query: 561 QKLIEWKVFEKGTT 574
            +L    V +K + 
Sbjct: 586 NELCSRGVVKKSSA 599



 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 145/397 (36%), Positives = 229/397 (57%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N IL+  C  GKL +A +++D   +R   PD      LI    +   + +A 
Sbjct: 208 VSPDVVTYNTILRTLCDSGKLKEAMEVLDRQMQRECYPDVITYTILIEATCKESGVGQAM 267

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L  M   G  PD +TYN+++ G+CK G++  AI  L+ M   GC+P+VIT+N ILR+M
Sbjct: 268 KLLDEMRDKGCKPDVVTYNVLINGICKEGRLDEAIRFLNHMPSYGCQPNVITHNIILRSM 327

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G++  A  F  + +RKGC P ++T+ ILI  +C++  I RAI+VL+ M   GC+P+ 
Sbjct: 328 CSTGRWMDAEKFLAEMIRKGCSPSVVTFNILINFLCRKGLIGRAIDVLEKMPQHGCTPNS 387

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           ++YN L++  CK  K + A+  ++ ++SRG  P+ +TYNTLL +L   G  D   +IL+ 
Sbjct: 388 LSYNPLLHALCKDKKMERAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQ 447

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +     SP + TYN +I+GL K G  D AI   ++M  K  +PDI+TY+T++G L +EG 
Sbjct: 448 LGSKGCSPVLITYNTVIDGLSKVGKTDDAIKLLDEMKGKGLKPDIITYSTLVGGLSREGK 507

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA+   H L      P  ITYN+++ GL K     +A+     M+  G  P + ++  
Sbjct: 508 VDEAIAFFHDLEEMGVKPNAITYNSIMLGLCKARQTVRAIDFLAYMVARGCKPTETSYMI 567

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           LI G       +EA++LL E+  RG   ++SA ++V+
Sbjct: 568 LIEGLAYEGLAKEALELLNELCSRGVVKKSSAEQVVV 604



 Score =  262 bits (669), Expect = 4e-67,   Method: Compositional matrix adjust.
 Identities = 143/430 (33%), Positives = 235/430 (54%), Gaps = 3/430 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C  G++  A +L+D   R +  PD      ++R L    ++++A +VL
Sbjct: 179 DVITYNVLISGYCKTGEIGSALQLLD---RMSVSPDVVTYNTILRTLCDSGKLKEAMEVL 235

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              +     PD ITY +++   CK   +  A+ LLDEM   GC+PDV+TYN ++  +   
Sbjct: 236 DRQMQRECYPDVITYTILIEATCKESGVGQAMKLLDEMRDKGCKPDVVTYNVLINGICKE 295

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +AI F       GC P +IT+ I++  +C       A + L +M  +GCSP +VT+
Sbjct: 296 GRLDEAIRFLNHMPSYGCQPNVITHNIILRSMCSTGRWMDAEKFLAEMIRKGCSPSVVTF 355

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+NF C++G    A+ V+  +   G  PNS++YN LLH+L      +   + LDIM  
Sbjct: 356 NILINFLCRKGLIGRAIDVLEKMPQHGCTPNSLSYNPLLHALCKDKKMERAIEYLDIMVS 415

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN L+  LCK G VD A+   NQ+ SK C P ++TYNTV+  L K G  ++
Sbjct: 416 RGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLGSKGCSPVLITYNTVIDGLSKVGKTDD 475

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A++LL  + G    P +ITY+TL+ GL+++G +++A+  +  + E G+ P+ IT+ +++ 
Sbjct: 476 AIKLLDEMKGKGLKPDIITYSTLVGGLSREGKVDEAIAFFHDLEEMGVKPNAITYNSIML 535

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+A Q   A+D L  +  RG K   ++Y ++I GL        A+++L  + S     
Sbjct: 536 GLCKARQTVRAIDFLAYMVARGCKPTETSYMILIEGLAYEGLAKEALELLNELCSRGVVK 595

Query: 536 DDTVFSTIVK 545
             +    +VK
Sbjct: 596 KSSAEQVVVK 605


>gi|356510082|ref|XP_003523769.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 602

 Score =  354 bits (908), Expect = 9e-95,   Method: Compositional matrix adjust.
 Identities = 187/469 (39%), Positives = 281/469 (59%), Gaps = 38/469 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E  +N  L+     G+L +  K ++ M  +  IPD   C +LIRG  R  + +KA++++
Sbjct: 105 EEFASNIHLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTKKATRIM 164

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +I+  SG VPD ITYN+++GG CK G+I  A+ +L+ MSV+   PDV+TYNTILR++ D+
Sbjct: 165 EILENSGAVPDVITYNVLIGGYCKSGEIDKALEVLERMSVA---PDVVTYNTILRSLCDS 221

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK K+A+     QL++ C P +ITYTILIE  C   G+ +A+++LD+M  +GC PD+VTY
Sbjct: 222 GKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTY 281

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK+G+ D+A+  +NN+ S G +PN IT+N +L S+ S G W   +++L  M  
Sbjct: 282 NVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSMCSTGRWMDAERLLSDMLR 341

Query: 356 ASHSPTVFTYNILINGLC----------------KYGLV-------------------DR 380
              SP+V T+NILIN LC                K+G V                   DR
Sbjct: 342 KGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNSLSYNPLLHGFCQEKKMDR 401

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           AI     MVS+ C PDIVTYNT+L ALCK+G ++ A+++L+ L+   CSP LITYNT+ID
Sbjct: 402 AIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQLSSKGCSPVLITYNTVID 461

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL K G  E A+ L  +M   G+ PD IT+ TL+ G  R  +V+EA+ +  ++     K 
Sbjct: 462 GLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGKVDEAIKIFHDMEGLSIKP 521

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
               Y  ++ GLCK+++   AI  L  M+    KP +  ++ +++ +AD
Sbjct: 522 SAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTILIEGIAD 570



 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 147/397 (37%), Positives = 231/397 (58%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N IL++ C  GKL +A +++D   +R   PD      LI        + +A 
Sbjct: 204 VAPDVVTYNTILRSLCDSGKLKEAMEVLDRQLQRECYPDVITYTILIEATCNDSGVGQAM 263

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L  M   G  PD +TYN+++ G+CK G++  AI  L+ M   GC+P+VIT+N ILR+M
Sbjct: 264 KLLDEMRKKGCKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCKPNVITHNIILRSM 323

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G++  A     D LRKGC P ++T+ ILI  +C++  + RAI+VL+ M   GC P+ 
Sbjct: 324 CSTGRWMDAERLLSDMLRKGCSPSVVTFNILINFLCRKRLLGRAIDVLEKMPKHGCVPNS 383

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           ++YN L++  C++ K D A+  +  ++SRG  P+ +TYNTLL +L   G  DA  +IL+ 
Sbjct: 384 LSYNPLLHGFCQEKKMDRAIEYLEIMVSRGCYPDIVTYNTLLTALCKDGKVDAAVEILNQ 443

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           ++    SP + TYN +I+GL K G  + A+    +M  K  +PDI+TY+T+L  L +EG 
Sbjct: 444 LSSKGCSPVLITYNTVIDGLTKVGKTEYAVELLEEMRRKGLKPDIITYSTLLRGLGREGK 503

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA+++ H + G S  P  +TYN ++ GL K     +A+     M+E G  P + T+  
Sbjct: 504 VDEAIKIFHDMEGLSIKPSAVTYNAIMLGLCKAQQTSRAIDFLAYMVEKGCKPTEATYTI 563

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           LI G       EEA++LL E+  RG   ++SA ++V+
Sbjct: 564 LIEGIADEGLAEEALELLNELCSRGFVKKSSAEQVVV 600


>gi|356518398|ref|XP_003527866.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 603

 Score =  343 bits (881), Expect = 1e-91,   Method: Compositional matrix adjust.
 Identities = 194/522 (37%), Positives = 295/522 (56%), Gaps = 48/522 (9%)

Query: 68  DRVNEVDQDEWSS-----ESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNK 122
           +RV+ V + E S      +  V   N  L G+ +  +S  P+  +    F   +E  +N 
Sbjct: 58  NRVSAVSKSEASGMNGRLQQIVSTPNGDLNGIGM--ESSSPNGVNGSRSF---EEFASNI 112

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            L+     G+L +  K ++ M  +  IPD   C +LIRG  R  +  KA+++++I+  SG
Sbjct: 113 HLRKLVRNGELEEGLKFLERMIYQGDIPDVIACTSLIRGFCRSGKTRKATRIMEILENSG 172

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD ITYN+++GG CK G+I  A+ +L+ MSV+   PDV+TYNTILR++ D+GK K+A+
Sbjct: 173 AVPDVITYNVLIGGYCKSGEIDKALQVLERMSVA---PDVVTYNTILRSLCDSGKLKEAM 229

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                Q+++ C P +ITYTILIE  C   G+ +A+++LD+M  +GC PD+VTYN L+N  
Sbjct: 230 EVLDRQMQRECYPDVITYTILIEATCNDSGVGQAMKLLDEMRKKGCKPDVVTYNVLINGI 289

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK+G+ D+A+  +NN+   G +PN IT+N +L S+ S G W   +++L  M     SP+V
Sbjct: 290 CKEGRLDEAIKFLNNMPLYGCQPNVITHNIILRSMCSTGRWMDAERLLADMLRKGCSPSV 349

Query: 363 FTYNILINGLCKYGLV-----------------------------------DRAINSFNQ 387
            T+NILIN LC+  L+                                   DRAI     
Sbjct: 350 VTFNILINFLCRKRLLGRAIDVLEKMPKHGCMPNSLSYNPLLHGFCQEKKMDRAIEYLEI 409

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           MVS+ C PDIVTYNT+L ALCK+G  + A+++L+ L+   CSP LITYNT+IDGL K G 
Sbjct: 410 MVSRGCYPDIVTYNTLLTALCKDGKADAAVEILNQLSSKGCSPVLITYNTVIDGLTKVGK 469

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            E A  L  +M   G+ PD IT+ TL+ G     +V+EA+ +  ++     K     Y  
Sbjct: 470 TEYAAELLEEMRRKGLKPDIITYSTLLRGLGCEGKVDEAIKIFHDMEGLSIKPSAVTYNA 529

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           ++ GLCK+++   AI  L  M+    KP    ++ +++ +AD
Sbjct: 530 IMLGLCKAQQTSRAIDFLAYMVEKGCKPTKATYTILIEGIAD 571


>gi|226509112|ref|NP_001141010.1| uncharacterized protein LOC100273089 [Zea mays]
 gi|194702156|gb|ACF85162.1| unknown [Zea mays]
 gi|413937351|gb|AFW71902.1| hypothetical protein ZEAMMB73_497690 [Zea mays]
          Length = 567

 Score =  319 bits (818), Expect = 2e-84,   Method: Compositional matrix adjust.
 Identities = 177/505 (35%), Positives = 281/505 (55%), Gaps = 50/505 (9%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHF--CINLIRGLIRIDRI 168
           P  +    +  + L+    RG+L DA +L+D +A  N         C  LI+ L    R 
Sbjct: 61  PRRKASSASATERLRVLVRRGELDDALRLVDSLAGLNPPSPAAVGPCAALIKKLCASGRT 120

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
             A +VL     +   PD + YN MV G C  GQ+ +A  L+ +M V   EPD  TYNT+
Sbjct: 121 ADARRVL-----AASGPDVMVYNAMVAGYCGAGQLDAARRLVADMPV---EPDAYTYNTL 172

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +R +   G+   A+   +D  R+GC P ++TYTIL+E  CK+ G  +A+++LD+M  +GC
Sbjct: 173 IRGLCGRGRTSNALAVLEDMFRRGCLPDVVTYTILLEATCKRSGYKQAMKLLDEMHDKGC 232

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +PDIVTYN ++N  C++G+ +DA+  + NL S G EPN+++YN +L  L +   W+  +K
Sbjct: 233 APDIVTYNVVLNGICQEGRVEDAMEFLKNLPSYGCEPNTVSYNIVLKGLFTAERWEDAEK 292

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM-------------------- 388
           +++ M      P V T+N+LI+ LC+ GLV+ A+    QM                    
Sbjct: 293 LMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQMPQYGCTPNSLSYNPLLHAFC 352

Query: 389 ---------------VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
                          VS+ C PDIV+YNT+L ALC+ G ++ A++LLH L    CSP LI
Sbjct: 353 KQKKIHKAMEFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIELLHQLKDKGCSPVLI 412

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           +YNT+IDGL K G  ++A+ L  +M   G+ PD IT+ T+  G CR D++EEAV    ++
Sbjct: 413 SYNTVIDGLTKAGKTKEALELLDEMTSKGLQPDIITYSTIASGLCREDRIEEAVRTFCKV 472

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
              G +   + Y  ++ GLCK ++   AI +   MISS   P+++ ++ +V+ +A +G+ 
Sbjct: 473 QDMGIRPTAALYNAILLGLCKRRETHNAIDLFAYMISSGCMPNESTYTILVEGLAYEGLV 532

Query: 554 EEAYKLWQKL-----IEWKVFEKGT 573
           +EA +L+ +L     +  K+ +KG+
Sbjct: 533 KEARELFAQLCSRGVVNKKLMKKGS 557


>gi|356551783|ref|XP_003544253.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 576

 Score =  314 bits (805), Expect = 8e-83,   Method: Compositional matrix adjust.
 Identities = 172/484 (35%), Positives = 270/484 (55%), Gaps = 38/484 (7%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           N E++  + L+     G+L + S+ ++ M  + + PD   C  LIR   +I R + AS++
Sbjct: 77  NFEESEIRHLRRLIRNGELEEGSRFLEYMTNKGKSPDVIACTALIREFCKIGRTKNASQI 136

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           + I+  SG V D  +YN+++ G CK G+I  A+ +LD M VS   P+  TY+ +L ++ D
Sbjct: 137 MGILEESGAVIDVTSYNVLISGYCKSGEIEEALRVLDRMGVS---PNAATYDAVLCSLCD 193

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK KQA+     QL+  C P ++T T+LI+  CK+ G+ +A+++ ++M  +GC PD+VT
Sbjct: 194 RGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRNKGCKPDVVT 253

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L+   CK G+ D+A+  +  L S G +P+ I++N +L SL S G W    K+L  M 
Sbjct: 254 YNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSLCSGGRWMDAMKLLATML 313

Query: 355 EASHSPTVFTYNILINGLCKYGL-----------------------------------VD 379
                P+V T+NILIN LC+ GL                                   +D
Sbjct: 314 RKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGID 373

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           RAI     MVS+ C PDIVTYN +L ALCK+G +++A+ +L  L+   CSP LI+YNT+I
Sbjct: 374 RAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVI 433

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DGL K G  E A+ L  +M   G+ PD IT  +++ G  R  +V EA+     + +   +
Sbjct: 434 DGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIR 493

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +I GLCKS++  +AI  L  M++   KP +  ++T++K +  +G+ E+A KL
Sbjct: 494 PNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKL 553

Query: 560 WQKL 563
             +L
Sbjct: 554 SNEL 557



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 202/385 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  +  T + +L + C RGKL  A +++    +    PD   C  LI    +   + +A 
Sbjct: 177 VSPNAATYDAVLCSLCDRGKLKQAMQVLGRQLQSKCYPDVVTCTVLIDATCKESGVGQAM 236

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+   M   G  PD +TYN+++ G CK G++  AI  L ++   GC+PDVI++N ILR++
Sbjct: 237 KLFNEMRNKGCKPDVVTYNVLIKGFCKGGRLDEAIRFLKKLPSYGCQPDVISHNMILRSL 296

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G++  A+      LRKGC P ++T+ ILI  +C++  + +A+ VL+ M   G +P+ 
Sbjct: 297 CSGGRWMDAMKLLATMLRKGCLPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNS 356

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            ++N L+   C     D A+  +  ++SRG  P+ +TYN LL +L   G  D    IL  
Sbjct: 357 RSFNPLIQGFCNGKGIDRAIEYLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQ 416

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           ++    SP++ +YN +I+GL K G  + A+    +M  K  +PD++T  +V+G L +EG 
Sbjct: 417 LSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGK 476

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA++  H L   +  P    YN++I GL K      A+     M+  G  P + T+ T
Sbjct: 477 VREAMKFFHYLKRFAIRPNAFIYNSIITGLCKSQQTSLAIDFLADMVAKGCKPTEATYTT 536

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           LI G       E+A  L  E+  RG
Sbjct: 537 LIKGITYEGLAEDASKLSNELYSRG 561



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/242 (29%), Positives = 115/242 (47%), Gaps = 36/242 (14%)

Query: 123 ILQNF-CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           IL NF C +G L  A  ++++M +    P+      LI+G      I++A + L+IMV  
Sbjct: 326 ILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNGKGIDRAIEYLEIMVSR 385

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD +TYN+++  LCK G++  A+ +L ++S  GC P +I+YNT++  +   GK + A
Sbjct: 386 GCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELA 445

Query: 242 IGFWKDQLRKGCPPYLIT-----------------------------------YTILIEQ 266
           +   ++   KG  P LIT                                   Y  +I  
Sbjct: 446 VELLEEMCYKGLKPDLITCTSVVGGLSREGKVREAMKFFHYLKRFAIRPNAFIYNSIITG 505

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +CK    + AI+ L DM  +GC P   TY +L+     +G  +DA  + N L SRG+   
Sbjct: 506 LCKSQQTSLAIDFLADMVAKGCKPTEATYTTLIKGITYEGLAEDASKLSNELYSRGLVKR 565

Query: 327 SI 328
           S+
Sbjct: 566 SL 567


>gi|357149641|ref|XP_003575182.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 557

 Score =  314 bits (804), Expect = 9e-83,   Method: Compositional matrix adjust.
 Identities = 169/488 (34%), Positives = 275/488 (56%), Gaps = 43/488 (8%)

Query: 120 NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           +N  L+    RG L +A +L++ M+          C  LI+ L    R  +A +VL    
Sbjct: 62  SNDRLRGLVRRGDLEEALRLVESMSGLEPSAAPGPCAALIKKLCASGRTAEARRVL---- 117

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            +   PD + YN MV G C  GQ+ +A  L+ +M +   EPD  TYNT++R +   G+  
Sbjct: 118 -AACEPDVMAYNAMVAGYCVTGQLDAARRLVADMPM---EPDSYTYNTLIRGLCGRGRTG 173

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            A+    D LR+GC P ++TYTIL+E  CK+ G  +A+++LD+M  +GC+PDI+TYN +V
Sbjct: 174 NALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRAKGCAPDIITYNVVV 233

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  C++G+ DDA+  + +L S G EPN+++YN +L  L +   W+  +K++  M++  + 
Sbjct: 234 NGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAERWEDAEKLMAEMSQKGYP 293

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQ-------------------------------- 387
           P V T+N+LI+ LC+ GLV+ A+   +Q                                
Sbjct: 294 PNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYNPILHAFCKQKKMDRAMAF 353

Query: 388 ---MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
              MVS+ C PDIV+YNT+L ALC+ G ++ A++LLH L    C+P LI+YNT+IDGL K
Sbjct: 354 VELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNTVIDGLTK 413

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G  ++A+ L  +M+  G+ PD IT+ T+  G CR D++EEA+    ++   G +     
Sbjct: 414 AGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEAIRAFCKVQDMGIRPNTVL 473

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  ++ GLCK ++   AI +   MIS+   P+++ ++ +++ +  +G+ +EA +L  +L 
Sbjct: 474 YNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEGLTYEGLVKEARELLGELC 533

Query: 565 EWKVFEKG 572
              V  KG
Sbjct: 534 SRGVVSKG 541



 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 141/441 (31%), Positives = 239/441 (54%), Gaps = 2/441 (0%)

Query: 58  CRGLPGNVCID-RVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVEND 116
           C  L   +C   R  E  +   + E  V+A N  + G  +T +        +D P +E D
Sbjct: 97  CAALIKKLCASGRTAEARRVLAACEPDVMAYNAMVAGYCVTGQLDAARRLVADMP-MEPD 155

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
             T N +++  C RG+  +A  ++D M RR  +PD      L+    +    ++A K+L 
Sbjct: 156 SYTYNTLIRGLCGRGRTGNALVVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAMKLLD 215

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M   G  PD ITYN++V G+C+ G++  AI  L  +   GCEP+ ++YN +L+ +    
Sbjct: 216 EMRAKGCAPDIITYNVVVNGICQEGRVDDAIEFLKSLPSHGCEPNTVSYNIVLKGLCTAE 275

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +++ A     +  +KG PP ++T+ +LI  +C++  +  A+EVLD +   GC+P+ ++YN
Sbjct: 276 RWEDAEKLMAEMSQKGYPPNVVTFNMLISFLCRRGLVEPAMEVLDQIPKYGCTPNSLSYN 335

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            +++  CKQ K D A+  +  ++SRG  P+ ++YNTLL +L   G  DA  ++L  + + 
Sbjct: 336 PILHAFCKQKKMDRAMAFVELMVSRGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 395

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             +P + +YN +I+GL K G    A+   N+MV+K  QPDI+TY+T+   LC+E  + EA
Sbjct: 396 GCTPVLISYNTVIDGLTKAGKTKEALELLNEMVTKGLQPDIITYSTISSGLCREDRIEEA 455

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           ++    +      P  + YN ++ GL K+     A+ L+  M+ NG  P++ T+  LI G
Sbjct: 456 IRAFCKVQDMGIRPNTVLYNAILLGLCKRRETHNAIDLFIYMISNGCMPNESTYTILIEG 515

Query: 477 FCRADQVEEAVDLLKEIGKRG 497
                 V+EA +LL E+  RG
Sbjct: 516 LTYEGLVKEARELLGELCSRG 536


>gi|46390363|dbj|BAD15828.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|215697127|dbj|BAG91121.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 554

 Score =  313 bits (802), Expect = 2e-82,   Method: Compositional matrix adjust.
 Identities = 172/483 (35%), Positives = 271/483 (56%), Gaps = 47/483 (9%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L++   RG+L +A +L+   ARR   PD   C  LI+ L    R  +A +VL     +  
Sbjct: 72  LRSLVRRGELDEALRLVG-SARR---PDAGTCAALIKKLSASGRTAEARRVL-----AAC 122

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            PD + YN MV G C  GQ+ +A  L+ EM V   EPD  TYNT++R +   G+   A+ 
Sbjct: 123 GPDVMAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALA 179

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
              + LR+ C P ++TYTIL+E  CK+ G  +A+++LD+M  +GC+PDIVTYN +VN  C
Sbjct: 180 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 239

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           ++G+ DDA+  + NL S G EPN+++YN +L  L +   W+  ++++  M +    P V 
Sbjct: 240 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 299

Query: 364 TYNILINGLCKYGLVDRAINSFNQ-----------------------------------M 388
           T+N+LI+ LC+ GLV+ A+    Q                                   M
Sbjct: 300 TFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 359

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           VS+ C PDIV+YNT+L ALC+ G ++ A++LLH L    C+P LI+YNT+IDGL K G  
Sbjct: 360 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 419

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           ++A+ L  +M+  G+ PD IT+ T+  G CR D++E+A+    ++   G +     Y  +
Sbjct: 420 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 479

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           I GLCK ++   AI +   MI +   P+++ ++ +++ +A +G+ +EA  L  +L    V
Sbjct: 480 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGV 539

Query: 569 FEK 571
             K
Sbjct: 540 VRK 542



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 129/385 (33%), Positives = 219/385 (56%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N +++  C RG+  +A  ++D M RR  +PD      L+    +    ++A 
Sbjct: 154 VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 213

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L  M   G  PD +TYN++V G+C+ G++  AI  L  +   GCEP+ ++YN +L+ +
Sbjct: 214 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 273

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +++ A     +  +KGCPP ++T+ +LI  +C++  +  A+EVL+ +   GC+P+ 
Sbjct: 274 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 333

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           ++YN L++  CKQ K D A+  ++ ++SRG  P+ ++YNTLL +L   G  D   ++L  
Sbjct: 334 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 393

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + +   +P + +YN +I+GL K G    A+   N+MVSK  QPDI+TY+T+   LC+E  
Sbjct: 394 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 453

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +A++    +      P  + YN +I GL K+     A+ L+  M+ NG  P++ T+  
Sbjct: 454 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 513

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           LI G      ++EA DLL E+  RG
Sbjct: 514 LIEGLAYEGLIKEARDLLDELCSRG 538



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 102/208 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L  FC + K+  A   +D+M  R   PD      L+  L R   ++ A ++L  +  
Sbjct: 337 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 396

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  I+YN ++ GL K G+ + A+ LL+EM   G +PD+ITY+TI   +    + + 
Sbjct: 397 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED 456

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI  +      G  P  + Y  +I  +CK+     AI++   M   GC P+  TY  L+ 
Sbjct: 457 AIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE 516

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSI 328
               +G   +A  +++ L SRG+   S+
Sbjct: 517 GLAYEGLIKEARDLLDELCSRGVVRKSL 544


>gi|356498873|ref|XP_003518272.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 566

 Score =  310 bits (793), Expect = 2e-81,   Method: Compositional matrix adjust.
 Identities = 171/492 (34%), Positives = 273/492 (55%), Gaps = 38/492 (7%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           N E++    L      G+L + S+ ++ M  + +IPD   C  LIR   +I R + A+++
Sbjct: 67  NFEESEIHHLCRLIRNGELEEGSRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRI 126

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           + I+  SG V D  +YN+++   CK G+I  A+ +LD  SV+   P+  TY+ +L ++ D
Sbjct: 127 MGILEESGAVIDANSYNVLINAYCKSGEIEEALRVLDHTSVA---PNAATYDAVLCSLCD 183

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK KQA+     QL+  C P ++T T+LI+  CK+ G+ +A+++ ++M  +GC PD+VT
Sbjct: 184 RGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVT 243

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L+   CK+G+ D+A++ +  L S G + + I++N +L SL S G W    K+L  M 
Sbjct: 244 YNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATML 303

Query: 355 EASHSPTVFTYNILINGLCKYGL-----------------------------------VD 379
                P+V T+NILIN LC+ GL                                   +D
Sbjct: 304 RKGCFPSVVTFNILINFLCQKGLLGKALNVLEMMPKHGHTPNSRSFNPLIQGFCNRKGID 363

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           RAI     MVS+ C PDIVTYN +L ALCK+G +++A+ +L  L+   CSP LI+YNT+I
Sbjct: 364 RAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVILSQLSSKGCSPSLISYNTVI 423

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DGL K G  E A+ L  +M   G+ PD IT  +++ G  R  +V EA+     +   G K
Sbjct: 424 DGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSREGKVHEAIKFFHYLKGFGIK 483

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  ++ GLCK+++  +AI  L  M+++  KP +  ++T++K +  +G+ EEA KL
Sbjct: 484 PNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASYTTLIKGITYEGLAEEASKL 543

Query: 560 WQKLIEWKVFEK 571
             +L    + +K
Sbjct: 544 SNELYSRGLVKK 555



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 127/396 (32%), Positives = 209/396 (52%)

Query: 102 DPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRG 161
           + +L   D   V  +  T + +L + C RGKL  A +++D   +    PD   C  LI  
Sbjct: 156 EEALRVLDHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPDVVTCTVLIDA 215

Query: 162 LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
             +   + +A K+   M   G  PD +TYN+++ G CK G++  AI  L ++   GC+ D
Sbjct: 216 TCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLKKLPSYGCQSD 275

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           VI++N ILR++   G++  A+      LRKGC P ++T+ ILI  +C++  + +A+ VL+
Sbjct: 276 VISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTFNILINFLCQKGLLGKALNVLE 335

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
            M   G +P+  ++N L+   C +   D A+  +  ++SRG  P+ +TYN LL +L   G
Sbjct: 336 MMPKHGHTPNSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDG 395

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             D    IL  ++    SP++ +YN +I+GL K G  + A+    +M  K  +PD++T  
Sbjct: 396 KVDDAVVILSQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCT 455

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           +V+G L +EG ++EA++  H L G    P    YN+++ GL K      A+     M+ N
Sbjct: 456 SVVGGLSREGKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVAN 515

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           G  P + ++ TLI G       EEA  L  E+  RG
Sbjct: 516 GCKPTEASYTTLIKGITYEGLAEEASKLSNELYSRG 551



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/213 (29%), Positives = 107/213 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           + ++ N ++Q FC+R  +  A + ++IM  R   PD      L+  L +  +++ A  +L
Sbjct: 345 NSRSFNPLIQGFCNRKGIDRAIEHLEIMVSRGCYPDIVTYNILLTALCKDGKVDDAVVIL 404

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +   G  P  I+YN ++ GL K G+   A+ LL+EM   G +PD+IT  +++  +   
Sbjct: 405 SQLSSKGCSPSLISYNTVIDGLLKVGKAELAVELLEEMCYKGLKPDLITCTSVVGGLSRE 464

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +AI F+      G  P    Y  ++  +CK    + AI+ L DM   GC P   +Y
Sbjct: 465 GKVHEAIKFFHYLKGFGIKPNAFIYNSIMMGLCKAQQTSLAIDFLVDMVANGCKPTEASY 524

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
            +L+     +G  ++A  + N L SRG+   S+
Sbjct: 525 TTLIKGITYEGLAEEASKLSNELYSRGLVKKSL 557



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/229 (25%), Positives = 103/229 (44%), Gaps = 3/229 (1%)

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            + L+ M      P V     LI   CK G    A      +       D  +YN ++ A
Sbjct: 89  SRFLEYMTNKGKIPDVVACTALIREFCKIGRTKNATRIMGILEESGAVIDANSYNVLINA 148

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK G + EAL++L   + +S +P   TY+ ++  L  +G +++AM +  + +++   PD
Sbjct: 149 YCKSGEIEEALRVL---DHTSVAPNAATYDAVLCSLCDRGKLKQAMQVLDRQLQSKCYPD 205

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T   LI   C+   V +A+ L  E+  +G K     Y ++I G CK  ++D AI  L+
Sbjct: 206 VVTCTVLIDATCKESGVGQAMKLFNEMRGKGCKPDVVTYNVLIKGFCKEGRLDEAIIFLK 265

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            + S   + D    + I++ +   G   +A KL   ++    F    T 
Sbjct: 266 KLPSYGCQSDVISHNMILRSLCSGGRWMDAMKLLATMLRKGCFPSVVTF 314


>gi|326505340|dbj|BAK03057.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326511084|dbj|BAJ91889.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518326|dbj|BAJ88192.1| predicted protein [Hordeum vulgare subsp. vulgare]
 gi|326518558|dbj|BAJ88308.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 556

 Score =  308 bits (790), Expect = 4e-81,   Method: Compositional matrix adjust.
 Identities = 171/494 (34%), Positives = 272/494 (55%), Gaps = 44/494 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V +    +N  L+    RG L +A +L++ MA   +      C  LI+ L    R  +A 
Sbjct: 52  VPHRSAASNDRLRVLVRRGDLEEAIRLVESMAGL-EPSAAGPCAALIKKLCASGRTAEAR 110

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +VL     +   PD ++YN MV G C  GQ+ +A  L+  M +   EPD  TYNT++R +
Sbjct: 111 RVL-----ASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM---EPDTYTYNTLIRGL 162

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A+    D LR+GC P ++TYTIL+E  CK+ G  +A+++LD+M  +GC+PDI
Sbjct: 163 CGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLDEMRDKGCAPDI 222

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN +VN  C++G+ DDA+  + +L S G EPN+++YN +L  L +   W+  +K++  
Sbjct: 223 VTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAERWEDAEKLMAE 282

Query: 353 MNEASHSPTVFTYNILINGLCKYGLV---------------------------------- 378
           M+     P V T+N+LI+ LC+ GLV                                  
Sbjct: 283 MSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYNPILHAFCKQKK 342

Query: 379 -DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            DRA+     MVS  C PDIV+YNT+L ALC+ G ++ A++LLH L    C+P LI+YNT
Sbjct: 343 MDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDKGCTPVLISYNT 402

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +IDGL K G  E+A+ L  +M+  G+ PD IT+ T+  G CR  ++EEA+    ++   G
Sbjct: 403 VIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEAIKAFCKVQDMG 462

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            +     Y  ++ GLCK +    AI +   M+S+   P+++ ++ +++ +A +G+ +EA 
Sbjct: 463 IRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEGLAYEGLVKEAR 522

Query: 558 KLWQKLIEWKVFEK 571
           ++  +L    V  K
Sbjct: 523 EMMAELCSRGVVSK 536



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 219/453 (48%), Gaps = 37/453 (8%)

Query: 58  CRGLPGNVCID-RVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVEND 116
           C  L   +C   R  E  +   S E  V++ N  + G  +T +  +     +  P  E D
Sbjct: 93  CAALIKKLCASGRTAEARRVLASCEPDVMSYNAMVAGYCVTGQLDNARRLVAAMPM-EPD 151

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
             T N +++  C RG+  +A  ++D M RR  +PD      L+    +    ++A K+L 
Sbjct: 152 TYTYNTLIRGLCGRGRTDNALAVLDDMLRRGCVPDVVTYTILLEATCKRSGYKQAVKLLD 211

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M   G  PD +TYN++V G+C+ G++  A+  L  +   GCEP+ ++YN +L+ +    
Sbjct: 212 EMRDKGCAPDIVTYNVVVNGICQEGRVDDAMEFLKSLPSYGCEPNTVSYNIVLKGLCTAE 271

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD-------------- 282
           +++ A     +  RKG PP ++T+ +LI  +C++  +  A+E+LD               
Sbjct: 272 RWEDAEKLMAEMSRKGRPPNVVTFNMLISFLCRRGLVEPAMEILDQIPKYGCTPNSLSYN 331

Query: 283 ---------------------MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
                                M   GC PDIV+YN+L+   C+ G+ D AV +++ L  +
Sbjct: 332 PILHAFCKQKKMDRAMAFVELMVSSGCYPDIVSYNTLLTALCRGGEVDAAVELLHQLKDK 391

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G  P  I+YNT++  L   G  +   ++L+ M      P + TY+ + +GLC+ G ++ A
Sbjct: 392 GCTPVLISYNTVIDGLTKAGKTEEALELLNEMVTKGLQPDIITYSTISSGLCREGRIEEA 451

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           I +F ++     +P+ V YN +L  LCK    + A+ L   +  + C P   TY  LI+G
Sbjct: 452 IKAFCKVQDMGIRPNTVLYNAILLGLCKRRATHSAIDLFTYMVSNGCMPNESTYTILIEG 511

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           LA +G +++A  +  ++   G+    + ++  I
Sbjct: 512 LAYEGLVKEAREMMAELCSRGVVSKTLVNKGAI 544


>gi|225453062|ref|XP_002266822.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Vitis vinifera]
          Length = 582

 Score =  298 bits (763), Expect = 5e-78,   Method: Compositional matrix adjust.
 Identities = 153/450 (34%), Positives = 257/450 (57%), Gaps = 1/450 (0%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+++ F +   +  AS++++I+    + PD      +I G  +++RIE A++VL  M   
Sbjct: 108 KLIKGFFNFKNIEKASRVMEILESHTE-PDVFAYNAVISGFCKVNRIEAATQVLNRMKAR 166

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G +PD +TYN+M+G LC R ++  A+ +LD++ +  C P VITY  ++      G   +A
Sbjct: 167 GFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 226

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   ++ L +G  P + TY  +I  +CK+  + RA E++  +  +GC PD+++YN L+  
Sbjct: 227 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRA 286

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
              QGK+D+   ++  + SRG EPN +TY+ L+ SL   G  D    +L +M E   +P 
Sbjct: 287 FLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 346

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++Y+ LI+ LCK G +D AI   + M+S  C PDIV YNT+L ALCK G  N+AL++ +
Sbjct: 347 TYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFN 406

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L G  C P + +YNT+I  L   G   +A+ +   M+  G+ PD+IT+ +LI   CR  
Sbjct: 407 KLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDG 466

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            VEEA+ LL ++ + G +    +Y +V+ GLCK +++D AI +   MI    +P++T + 
Sbjct: 467 LVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYI 526

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
            +++ +   G   EA +L   L    V  +
Sbjct: 527 LLIEGIGFAGWRTEAMELANSLFSRDVISQ 556



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 215/392 (54%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + C+R KL  A K++D +   N +P       LI   I    I +A K+L
Sbjct: 171 DIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLL 230

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G +PD  TYN ++ G+CK G +  A  L+  ++  GC+PDVI+YN +LR   + 
Sbjct: 231 EEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCKPDVISYNILLRAFLNQ 290

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK+ +      +   +GC P  +TY+ILI  +C+   I  AI VL  M  +  +PD  +Y
Sbjct: 291 GKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSY 350

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L++  CK+G+ D A+ +++ ++S G  P+ + YNT+L +L   G  +   +I + +  
Sbjct: 351 DPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRG 410

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V +YN +I+ L   G   RA+     M+SK   PD +TYN+++  LC++G++ E
Sbjct: 411 MGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEE 470

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ LL  +  S   P +I+YN ++ GL K   ++ A+ ++ +M+E G  P++ T+  LI 
Sbjct: 471 AIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 530

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           G   A    EA++L   +  R    ++S  RL
Sbjct: 531 GIGFAGWRTEAMELANSLFSRDVISQDSFKRL 562



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 122/228 (53%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E ++ T + ++ + C  G++ +A  ++ +M  +   PD +    LI  L +  R++ A  
Sbjct: 309 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 368

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  M+ +G +PD + YN ++  LCK G    A+ + +++   GC P+V +YNT++  ++
Sbjct: 369 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 428

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G   +A+G     + KG  P  ITY  LI  +C+   +  AI +LDDM   G  P ++
Sbjct: 429 SCGDRSRALGMVPAMISKGVDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 488

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +YN ++   CK  + DDA+ +   ++ +G  PN  TY  L+  +G  G
Sbjct: 489 SYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 536


>gi|147789724|emb|CAN67401.1| hypothetical protein VITISV_025967 [Vitis vinifera]
          Length = 592

 Score =  297 bits (761), Expect = 9e-78,   Method: Compositional matrix adjust.
 Identities = 153/450 (34%), Positives = 257/450 (57%), Gaps = 1/450 (0%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+++ F +   +  AS++++I+    + PD      +I G  ++++IE A++VL  M   
Sbjct: 118 KLIKGFFNFKNIEKASRVMEILESHTE-PDVFAYNAVISGFCKVNQIEAATQVLNRMKAR 176

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G +PD +TYN+M+G LC R ++  A+ +LD++ +  C P VITY  ++      G   +A
Sbjct: 177 GFLPDIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 236

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   ++ L +G  P + TY  +I  +CK+  + RA E++  +  +GC PD+++YN L+  
Sbjct: 237 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRA 296

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
              QGK+D+   ++  + SRG EPN +TY+ L+ SL   G  D    +L +M E   +P 
Sbjct: 297 FLNQGKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 356

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++Y+ LI+ LCK G +D AI   + M+S  C PDIV YNT+L ALCK G  N+AL++ +
Sbjct: 357 TYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFN 416

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L G  C P + +YNT+I  L   G   +A+ +   M+  GI PD+IT+ +LI   CR  
Sbjct: 417 KLRGMGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDG 476

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            VEEA+ LL ++ + G +    +Y +V+ GLCK +++D AI +   MI    +P++T + 
Sbjct: 477 LVEEAIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYI 536

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
            +++ +   G   EA +L   L    V  +
Sbjct: 537 LLIEGIGFAGWRTEAMELANSLFSRDVISQ 566



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 214/392 (54%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + C+R KL  A  ++D +   N +P       LI   I    I +A K+L
Sbjct: 181 DIVTYNIMIGSLCNRRKLGLALTVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLL 240

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G +PD  TYN ++ G+CK G +  A  L+  ++  GCEPDVI+YN +LR   + 
Sbjct: 241 EEMLARGLLPDMYTYNAIIRGMCKEGMVERAAELITSLTSKGCEPDVISYNILLRAFLNQ 300

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK+ +      +   +GC P  +TY+ILI  +C+   I  AI VL  M  +  +PD  +Y
Sbjct: 301 GKWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSY 360

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L++  CK+G+ D A+ +++ ++S G  P+ + YNT+L +L   G  +   +I + +  
Sbjct: 361 DPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRG 420

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V +YN +I+ L   G   RA+     M+SK   PD +TYN+++  LC++G++ E
Sbjct: 421 MGCPPNVSSYNTMISALWSCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEE 480

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ LL  +  S   P +I+YN ++ GL K   ++ A+ ++ +M+E G  P++ T+  LI 
Sbjct: 481 AIGLLDDMEQSGFRPTVISYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIE 540

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           G   A    EA++L   +  R    ++S  RL
Sbjct: 541 GIGFAGWRTEAMELANSLFSRDVISQDSFKRL 572



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 66/228 (28%), Positives = 122/228 (53%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E ++ T + ++ + C  G++ +A  ++ +M  +   PD +    LI  L +  R++ A  
Sbjct: 319 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 378

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  M+ +G +PD + YN ++  LCK G    A+ + +++   GC P+V +YNT++  ++
Sbjct: 379 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPNVSSYNTMISALW 438

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G   +A+G     + KG  P  ITY  LI  +C+   +  AI +LDDM   G  P ++
Sbjct: 439 SCGDRSRALGMVPAMISKGIDPDEITYNSLISCLCRDGLVEEAIGLLDDMEQSGFRPTVI 498

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +YN ++   CK  + DDA+ +   ++ +G  PN  TY  L+  +G  G
Sbjct: 499 SYNIVLLGLCKVRRIDDAIGMFAEMIEKGCRPNETTYILLIEGIGFAG 546


>gi|125527955|gb|EAY76069.1| hypothetical protein OsI_03997 [Oryza sativa Indica Group]
          Length = 684

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 162/498 (32%), Positives = 261/498 (52%), Gaps = 47/498 (9%)

Query: 103 PSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGL 162
           P  PS+  P         N  L+   +R  L +A++L+D    R + PD + C  LIR L
Sbjct: 35  PEAPSASSP------NPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNL 88

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
            R  R   A++VL+    SG   D   YN +V G C+ GQ+ +A  L+  M V+   PD 
Sbjct: 89  CRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDA 145

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            TY  I+R + D G+  +A+    D L +GC P ++TYT+L+E VCK  G  +A+EVLD+
Sbjct: 146 YTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDE 205

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  +GC+P+IVTYN ++N  C++G+ DDA   +N L S G +P++++Y T+L  L +   
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265

Query: 343 WDAVDKILDIMNEASHSPTVFTY-----------------------------------NI 367
           W+ V+++   M E +  P   T+                                   NI
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +IN +CK G VD A    N M S  C PD ++Y TVL  LC+     +A +LL  +   +
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C P  +T+NT I  L +KG +E+A +L  QM E+G   + +T+  L+ GFC   +V+ A+
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +L   +  + N +    Y  ++ GLC ++++D A ++L  M+     P+   F+ +V   
Sbjct: 446 ELFYSMPCKPNTI---TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 548 ADDGMTEEAYKLWQKLIE 565
              G+ +EA +L ++++E
Sbjct: 503 CQKGLMDEAIELVEQMME 520



 Score =  246 bits (627), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 238/453 (52%), Gaps = 3/453 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C  G++ DA + ++ ++     PD      +++GL    R E   ++   M
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +    +P+ +T++M+V   C+ G +  AI +L++MS  GC  +    N ++ T+   G+ 
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F  +    GC P  I+YT +++ +C+      A E+L +M  + C P+ VT+N+ 
Sbjct: 337 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 396

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C++G  + A ++I  +   G E N +TYN L++    +G    VD  L++      
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG---RVDSALELFYSMPC 453

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  L+ GLC    +D A     +M+ K+C P++VT+N ++   C++G+++EA++
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +    C+P LITYNTL+DG+      E+A+ L   ++ NG+SPD +T+ ++I    
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITNDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R D+VEEA+ +   +   G + +   Y  ++  LCK    D AI     M+S+   P++ 
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
            + T+++ +A++   +E   L ++L    V  K
Sbjct: 634 TYITLIEGLANEDFLKETRDLLRELCSRGVLNK 666



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 212/417 (50%), Gaps = 38/417 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  +   +L+  C+  +  D  +L   M  +N +P+      L+R   R   +E+A +VL
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVL 308

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G   +T   N+++  +CK+G++  A   L+ M   GC PD I+Y T+L+ +   
Sbjct: 309 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 368

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +++ A    K+ +RK CPP  +T+   I  +C++  I +A  +++ M+  GC  +IVTY
Sbjct: 369 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+LVN  C QG+ D A+ +     S   +PN+ITY TLL  L +    DA  ++L  M +
Sbjct: 429 NALVNGFCVQGRVDSALEL---FYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC---------------------- 393
              +P V T+N+L++  C+ GL+D AI    QM+   C                      
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITNDCNSEE 545

Query: 394 -------------QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                         PDIVTY++++G L +E  + EA+++ H++      P  + YN ++ 
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 605

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
            L K+   + A+  +  M+ NG  P+++T+ TLI G    D ++E  DLL+E+  RG
Sbjct: 606 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662


>gi|115440343|ref|NP_001044451.1| Os01g0783100 [Oryza sativa Japonica Group]
 gi|20804869|dbj|BAB92551.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113533982|dbj|BAF06365.1| Os01g0783100 [Oryza sativa Japonica Group]
          Length = 684

 Score =  296 bits (758), Expect = 2e-77,   Method: Compositional matrix adjust.
 Identities = 162/498 (32%), Positives = 261/498 (52%), Gaps = 47/498 (9%)

Query: 103 PSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGL 162
           P  PS+  P         N  L+   +R  L +A++L+D    R + PD + C  LIR L
Sbjct: 35  PEAPSASSP------NPANARLRRLIARDDLAEAARLVDRATSRGEAPDVYLCTKLIRNL 88

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
            R  R   A++VL+    SG   D   YN +V G C+ GQ+ +A  L+  M V+   PD 
Sbjct: 89  CRRGRTSDAARVLRAAERSGTAVDVFAYNTLVAGYCRYGQLDAARRLIASMPVA---PDA 145

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            TY  I+R + D G+  +A+    D L +GC P ++TYT+L+E VCK  G  +A+EVLD+
Sbjct: 146 YTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQPSVVTYTVLLEAVCKSTGFGQAMEVLDE 205

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  +GC+P+IVTYN ++N  C++G+ DDA   +N L S G +P++++Y T+L  L +   
Sbjct: 206 MRAKGCTPNIVTYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKR 265

Query: 343 WDAVDKILDIMNEASHSPTVFTY-----------------------------------NI 367
           W+ V+++   M E +  P   T+                                   NI
Sbjct: 266 WEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNI 325

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +IN +CK G VD A    N M S  C PD ++Y TVL  LC+     +A +LL  +   +
Sbjct: 326 VINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKN 385

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C P  +T+NT I  L +KG +E+A +L  QM E+G   + +T+  L+ GFC   +V+ A+
Sbjct: 386 CPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQGRVDSAL 445

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +L   +  + N +    Y  ++ GLC ++++D A ++L  M+     P+   F+ +V   
Sbjct: 446 ELFYSMPCKPNTI---TYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFF 502

Query: 548 ADDGMTEEAYKLWQKLIE 565
              G+ +EA +L ++++E
Sbjct: 503 CQKGLMDEAIELVEQMME 520



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 239/453 (52%), Gaps = 3/453 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C  G++ DA + ++ ++     PD      +++GL    R E   ++   M
Sbjct: 217 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 276

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +    +P+ +T++M+V   C+ G +  AI +L++MS  GC  +    N ++ T+   G+ 
Sbjct: 277 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 336

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F  +    GC P  I+YT +++ +C+      A E+L +M  + C P+ VT+N+ 
Sbjct: 337 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 396

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C++G  + A ++I  +   G E N +TYN L++    +G    VD  L++      
Sbjct: 397 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG---RVDSALELFYSMPC 453

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  L+ GLC    +D A     +M+ K+C P++VT+N ++   C++G+++EA++
Sbjct: 454 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 513

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +    C+P LITYNTL+DG+ K    E+A+ L   ++ NG+SPD +T+ ++I    
Sbjct: 514 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 573

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R D+VEEA+ +   +   G + +   Y  ++  LCK    D AI     M+S+   P++ 
Sbjct: 574 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 633

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
            + T+++ +A++   +E   L ++L    V  K
Sbjct: 634 TYITLIEGLANEDFLKETRDLLRELCSRGVLNK 666



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/417 (29%), Positives = 212/417 (50%), Gaps = 38/417 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  +   +L+  C+  +  D  +L   M  +N +P+      L+R   R   +E+A +VL
Sbjct: 249 DTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQVL 308

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G   +T   N+++  +CK+G++  A   L+ M   GC PD I+Y T+L+ +   
Sbjct: 309 EQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLCRA 368

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +++ A    K+ +RK CPP  +T+   I  +C++  I +A  +++ M+  GC  +IVTY
Sbjct: 369 ERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIVTY 428

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+LVN  C QG+ D A+ +     S   +PN+ITY TLL  L +    DA  ++L  M +
Sbjct: 429 NALVNGFCVQGRVDSALEL---FYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEMLQ 485

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC---------------------- 393
              +P V T+N+L++  C+ GL+D AI    QM+   C                      
Sbjct: 486 KDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNSEE 545

Query: 394 -------------QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                         PDIVTY++++G L +E  + EA+++ H++      P  + YN ++ 
Sbjct: 546 ALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKILL 605

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
            L K+   + A+  +  M+ NG  P+++T+ TLI G    D ++E  DLL+E+  RG
Sbjct: 606 ALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 662


>gi|125539937|gb|EAY86332.1| hypothetical protein OsI_07707 [Oryza sativa Indica Group]
          Length = 584

 Score =  295 bits (755), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 164/475 (34%), Positives = 265/475 (55%), Gaps = 47/475 (9%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L++   RG+L +A +L+   ARR   PD   C  LI+ L    R  +A +VL     +  
Sbjct: 74  LRSLVRRGELDEALRLVG-SARR---PDAGTCAALIKKLSASGRTAEARRVL-----AAC 124

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            PD + YN M+ G C  GQ+ +A     E +V   E D  T +T++R +   G+   A+ 
Sbjct: 125 GPDVMAYNAMMAGYCGAGQVDAARRWCAERAV---ERDAYTCDTLIRGLCGRGRTANALA 181

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
              + LR+ C P ++TYTIL+E  CK+ G  +A+++LD+M  +GC+PDIVTYN +VN  C
Sbjct: 182 VLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGIC 241

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           ++G+ DDA+  + NL S G EPN+++YN +L  L +   W+  ++++  M +    P V 
Sbjct: 242 QEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVV 301

Query: 364 TYNILINGLCKYGLVDRAINSFNQ-----------------------------------M 388
           T+N+LI+ LC+ GLV+ A+    Q                                   M
Sbjct: 302 TFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLM 361

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           VS+ C PDIV+YNT+L ALC+ G ++ A++LLH L    C+P LI+YNT+IDGL K G  
Sbjct: 362 VSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKT 421

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           ++A+ L  +M+  G+ PD IT+ T+  G CR D++E+A+    ++   G +     Y  +
Sbjct: 422 KEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAI 481

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           I GLCK ++   AI +   MI +   P+++ ++ +++ +A +G+ +EA  L  +L
Sbjct: 482 ILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 536



 Score =  250 bits (638), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 129/388 (33%), Positives = 221/388 (56%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T + +++  C RG+  +A  ++D M RR  +PD      L+    +    ++A 
Sbjct: 156 VERDAYTCDTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 215

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L  M   G  PD +TYN++V G+C+ G++  AI  L  +   GCEP+ ++YN +L+ +
Sbjct: 216 KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 275

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +++ A     +  +KGCPP ++T+ +LI  +C++  +  A+EVL+ +   GCSP+ 
Sbjct: 276 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCSPNS 335

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           ++YN L++  CKQ K D A+  ++ ++SRG  P+ ++YNTLL +L   G  D   ++L  
Sbjct: 336 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 395

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + +   +P + +YN +I+GL K G    A+   N+MVSK  QPDI+TY+T+   LC+E  
Sbjct: 396 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 455

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +A++    +      P  + YN +I GL K+     A+ L+  M+ NG  P++ T+  
Sbjct: 456 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 515

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           LI G      ++EA DLL E+  RG ++
Sbjct: 516 LIEGLAYEGLIKEARDLLDELCSRGEEI 543



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 133/415 (32%), Positives = 219/415 (52%), Gaps = 3/415 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N ++  +C  G++  A +     A R    D + C  LIRGL    R   A  VL
Sbjct: 127 DVMAYNAMMAGYCGAGQVDAARRWC---AERAVERDAYTCDTLIRGLCGRGRTANALAVL 183

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+    VPD +TY +++   CKR   + A+ LLDEM   GC PD++TYN ++  +   
Sbjct: 184 DEMLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQE 243

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   AI F K+    GC P  ++Y I+++ +C       A E++ +M  +GC P++VT+
Sbjct: 244 GRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTF 303

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++F C++G  + A+ V+  +   G  PNS++YN LLH+   +   D     LD+M  
Sbjct: 304 NMLISFLCRKGLVEPALEVLEQIPKYGCSPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVS 363

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + +YN L+  LC+ G VD A+   +Q+  K C P +++YNTV+  L K G   E
Sbjct: 364 RGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKE 423

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL+LL+ +      P +ITY+T+  GL ++  +E A+  +G++ + GI P+ + +  +I 
Sbjct: 424 ALELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIIL 483

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           G C+  +   A+DL   +   G     S Y ++I GL     +  A  +L+ + S
Sbjct: 484 GLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 538


>gi|125582553|gb|EAZ23484.1| hypothetical protein OsJ_07180 [Oryza sativa Japonica Group]
          Length = 457

 Score =  290 bits (741), Expect = 2e-75,   Method: Compositional matrix adjust.
 Identities = 149/411 (36%), Positives = 238/411 (57%), Gaps = 38/411 (9%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           + YN MV G C  GQ+ +A  L+ EM V   EPD  TYNT++R +   G+   A+    +
Sbjct: 1   MAYNAMVAGYCGAGQLDAARRLVAEMPV---EPDAYTYNTLIRGLCGRGRTANALAVLDE 57

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            LR+ C P ++TYTIL+E  CK+ G  +A+++LD+M  +GC+PDIVTYN +VN  C++G+
Sbjct: 58  MLRRRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGR 117

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            DDA+  + NL S G EPN+++YN +L  L +   W+  ++++  M +    P V T+N+
Sbjct: 118 VDDAIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNM 177

Query: 368 LINGLCKYGLVDRAINSFNQ-----------------------------------MVSKN 392
           LI+ LC+ GLV+ A+    Q                                   MVS+ 
Sbjct: 178 LISFLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRG 237

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C PDIV+YNT+L ALC+ G ++ A++LLH L    C+P LI+YNT+IDGL K G  ++A+
Sbjct: 238 CYPDIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEAL 297

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  +M+  G+ PD IT+ T+  G CR D++E+A+    ++   G +     Y  +I GL
Sbjct: 298 ELLNEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGL 357

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           CK ++   AI +   MI +   P+++ ++ +++ +A +G+ +EA  L  +L
Sbjct: 358 CKRRETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDEL 408



 Score =  248 bits (632), Expect = 9e-63,   Method: Compositional matrix adjust.
 Identities = 128/387 (33%), Positives = 219/387 (56%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N +++  C RG+  +A  ++D M RR  +PD      L+    +    ++A 
Sbjct: 28  VEPDAYTYNTLIRGLCGRGRTANALAVLDEMLRRRCVPDVVTYTILLEATCKRSGYKQAM 87

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L  M   G  PD +TYN++V G+C+ G++  AI  L  +   GCEP+ ++YN +L+ +
Sbjct: 88  KLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIVLKGL 147

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +++ A     +  +KGCPP ++T+ +LI  +C++  +  A+EVL+ +   GC+P+ 
Sbjct: 148 CTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGCTPNS 207

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           ++YN L++  CKQ K D A+  ++ ++SRG  P+ ++YNTLL +L   G  D   ++L  
Sbjct: 208 LSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQ 267

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + +   +P + +YN +I+GL K G    A+   N+MVSK  QPDI+TY+T+   LC+E  
Sbjct: 268 LKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDR 327

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +A++    +      P  + YN +I GL K+     A+ L+  M+ NG  P++ T+  
Sbjct: 328 IEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTI 387

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNK 499
           LI G      ++EA DLL E+  R  +
Sbjct: 388 LIEGLAYEGLIKEARDLLDELCSRAGE 414



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 133/410 (32%), Positives = 219/410 (53%), Gaps = 3/410 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G+L  A +L+  M      PD +    LIRGL    R   A  VL  M+ 
Sbjct: 4   NAMVAGYCGAGQLDAARRLVAEMPVE---PDAYTYNTLIRGLCGRGRTANALAVLDEMLR 60

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
              VPD +TY +++   CKR   + A+ LLDEM   GC PD++TYN ++  +   G+   
Sbjct: 61  RRCVPDVVTYTILLEATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDD 120

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI F K+    GC P  ++Y I+++ +C       A E++ +M  +GC P++VT+N L++
Sbjct: 121 AIEFLKNLPSYGCEPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLIS 180

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
           F C++G  + A+ V+  +   G  PNS++YN LLH+   +   D     LD+M      P
Sbjct: 181 FLCRKGLVEPALEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYP 240

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + +YN L+  LC+ G VD A+   +Q+  K C P +++YNTV+  L K G   EAL+LL
Sbjct: 241 DIVSYNTLLTALCRSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELL 300

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           + +      P +ITY+T+  GL ++  +E A+  +G++ + GI P+ + +  +I G C+ 
Sbjct: 301 NEMVSKGLQPDIITYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKR 360

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +   A+DL   +   G     S Y ++I GL     +  A  +L+ + S
Sbjct: 361 RETHSAIDLFAYMIGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCS 410


>gi|413952239|gb|AFW84888.1| hypothetical protein ZEAMMB73_407218 [Zea mays]
          Length = 668

 Score =  288 bits (736), Expect = 8e-75,   Method: Compositional matrix adjust.
 Identities = 155/478 (32%), Positives = 258/478 (53%), Gaps = 42/478 (8%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           L+   +R  L  A++L+++ A R+ + PD + C  LIR L R  R   A++VL+    SG
Sbjct: 46  LRRLIAREDLAGAARLVELSASRDGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSG 105

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              D   YN +V G C+ G + +A  L+  M V+   PD  TY  ++R + D G+   A+
Sbjct: 106 SPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLIRVLCDRGRVADAL 162

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               D LR+GC P ++TYT+L+E +CK  G  +A+ VLD+M  +GC+P+IVTYN ++N  
Sbjct: 163 SLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGM 222

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C++G+ DDA  ++N L S G +P++++Y TLL  L +   WD V+++   M E +  P  
Sbjct: 223 CREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNE 282

Query: 363 FTY-----------------------------------NILINGLCKYGLVDRAINSFNQ 387
            T+                                   NI+IN +CK G VD A    N 
Sbjct: 283 VTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNN 342

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M S  C PD ++Y TVL  LC+    N+A +LL  +  ++C P  +T+NT I  L +KG 
Sbjct: 343 MGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGL 402

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +E+A++L  QM E+G +   +T+  L+ GFC    ++ A++L + +  + N +    Y  
Sbjct: 403 IEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMPCKPNTI---TYTT 459

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++ GLC ++++D A +++  M+     P+   F+ +V      G  +EA +L ++++E
Sbjct: 460 LLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMME 517



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 146/526 (27%), Positives = 252/526 (47%), Gaps = 67/526 (12%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   +++  C RG++ DA  L+D M RR   P+      L+  + +    E+A 
Sbjct: 138 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCKNSGFEQAM 197

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL  M   G  P+ +TYN+++ G+C+ G++  A  LL+ +   GC+PD ++Y T+L+ +
Sbjct: 198 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSYGCQPDTVSYTTLLKGL 257

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + ++      + + + K C P  +T+ +LI   C+   + RAI+VL  M    C+ + 
Sbjct: 258 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLQQMTEHECATNT 317

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP--------------------------- 325
              N ++N  CKQG+ DDA   +NN+ S G  P                           
Sbjct: 318 TLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRAERWNDAKELLKE 377

Query: 326 --------NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
                   N +T+NT +  L  +G  +    +++ M E   +  V TYN L+NG C  G 
Sbjct: 378 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTYNALVNGFCVQGH 437

Query: 378 VDRAINSFN--------------------------------QMVSKNCQPDIVTYNTVLG 405
           +D A+  F                                 +M+ ++C P++VT+N ++ 
Sbjct: 438 IDSALELFRSMPCKPNTITYTTLLTGLCNAERLDAAAELVAEMLHRDCPPNVVTFNVLVN 497

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             C++G L+EA++L+  +    C+P LITYNTL DG+ K    E A+ L   ++  G+SP
Sbjct: 498 FFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSEDALELLHGLVSKGVSP 557

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D IT  ++I    + D+VEEA+ +       G + +   Y  ++ GLCK  ++D AI  L
Sbjct: 558 DVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILLGLCKRHEIDNAIDFL 617

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
             M+S+   P+++ +  +++ +A +G+ +EA  L   L    V  K
Sbjct: 618 AYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVSK 663



 Score =  204 bits (518), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/422 (29%), Positives = 206/422 (48%), Gaps = 38/422 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  +   +L+  C+  +  D  +L   M  +N +P+      LIR   R   +E+A +VL
Sbjct: 246 DTVSYTTLLKGLCASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVL 305

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M       +T   N+++  +CK+G++  A   L+ M   GC PD I+Y T+L+ +   
Sbjct: 306 QQMTEHECATNTTLCNIVINSICKQGRVDDAFKFLNNMGSYGCNPDTISYTTVLKGLCRA 365

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            ++  A    K+ +R  CPP  +T+   I  +C++  I +AI +++ M   GC+  +VTY
Sbjct: 366 ERWNDAKELLKEMVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMQEHGCTVGVVTY 425

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+LVN  C QG  D A+ +  ++  +   PN+ITY TLL  L +    DA  +++  M  
Sbjct: 426 NALVNGFCVQGHIDSALELFRSMPCK---PNTITYTTLLTGLCNAERLDAAAELVAEMLH 482

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQM--------------------------- 388
               P V T+N+L+N  C+ G +D AI    QM                           
Sbjct: 483 RDCPPNVVTFNVLVNFFCQKGFLDEAIELVEQMMEHGCTPNLITYNTLFDGITKDCSSED 542

Query: 389 --------VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                   VSK   PD++T+++++G L KE  + EA+Q+ HL       P  + YN ++ 
Sbjct: 543 ALELLHGLVSKGVSPDVITFSSIIGILSKEDRVEEAIQMFHLAQDIGMRPKALVYNKILL 602

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL K+  ++ A+     M+ NG  P++ T+  LI G  R   ++EA DLL  +  RG   
Sbjct: 603 GLCKRHEIDNAIDFLAYMVSNGCMPNESTYIILIEGLAREGLLKEAQDLLSMLCSRGVVS 662

Query: 501 RN 502
           +N
Sbjct: 663 KN 664



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 44/172 (25%), Positives = 86/172 (50%), Gaps = 3/172 (1%)

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD+     ++  LC+ G  ++A ++L    GS     +  YNTL+ G  + G ++ A  L
Sbjct: 73  PDVYLCTKLIRNLCRRGRTSDAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRL 132

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            G M    ++PD  T+  LI   C   +V +A+ LL ++ +RG +     Y +++  +CK
Sbjct: 133 IGSM---PVAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCK 189

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           +   + A+ VL+ M +    P+   ++ I+  +  +G  ++A  L  +L  +
Sbjct: 190 NSGFEQAMAVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARDLLNRLFSY 241


>gi|125572252|gb|EAZ13767.1| hypothetical protein OsJ_03693 [Oryza sativa Japonica Group]
          Length = 715

 Score =  287 bits (734), Expect = 1e-74,   Method: Compositional matrix adjust.
 Identities = 154/465 (33%), Positives = 249/465 (53%), Gaps = 41/465 (8%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A++L+D    R + PD + C  LIR L R  R   A++VL+    SG   D   YN +V 
Sbjct: 93  AARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLVA 152

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
           G C+ GQ+ +A  L+  M V+   PD  TY  I+R + D G+  +A+    D L +GC P
Sbjct: 153 GYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQP 209

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            ++TYT+L+E VCK  G  +A+EVLD+M  +GC+P+IVTYN ++N  C++G+ DDA   +
Sbjct: 210 SVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREFL 269

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY---------- 365
           N L S G +P++++Y T+L  L +   W+ V+++   M E +  P   T+          
Sbjct: 270 NRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRG 329

Query: 366 -------------------------NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
                                    NI+IN +CK G VD A    N M S  C PD ++Y
Sbjct: 330 GMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISY 389

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
            TVL  LC+     +A +LL  +   +C P  +T+NT I  L +KG +E+A +L  QM E
Sbjct: 390 TTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSE 449

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           +G   + +T+  L+ GFC   +V+ A++L   +  + N +    Y  ++ GLC ++++D 
Sbjct: 450 HGCEVNIVTYNALVNGFCVQGRVDSALELFYSMPCKPNTI---TYTTLLTGLCNAERLDA 506

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           A ++L  M+     P+   F+ +V      G+ +EA +L ++++E
Sbjct: 507 AAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMME 551



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 239/453 (52%), Gaps = 3/453 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C  G++ DA + ++ ++     PD      +++GL    R E   ++   M
Sbjct: 248 TYNVIINGMCREGRVDDAREFLNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEM 307

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +    +P+ +T++M+V   C+ G +  AI +L++MS  GC  +    N ++ T+   G+ 
Sbjct: 308 MEKNCMPNEVTFDMLVRFFCRGGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRV 367

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F  +    GC P  I+YT +++ +C+      A E+L +M  + C P+ VT+N+ 
Sbjct: 368 DDAFQFLNNMGSYGCSPDTISYTTVLKGLCRAERWEDAKELLKEMVRKNCPPNEVTFNTF 427

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C++G  + A ++I  +   G E N +TYN L++    +G    VD  L++      
Sbjct: 428 ICILCQKGLIEQATMLIEQMSEHGCEVNIVTYNALVNGFCVQG---RVDSALELFYSMPC 484

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  L+ GLC    +D A     +M+ K+C P++VT+N ++   C++G+++EA++
Sbjct: 485 KPNTITYTTLLTGLCNAERLDAAAELLAEMLQKDCAPNVVTFNVLVSFFCQKGLMDEAIE 544

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +    C+P LITYNTL+DG+ K    E+A+ L   ++ NG+SPD +T+ ++I    
Sbjct: 545 LVEQMMEHGCTPNLITYNTLLDGITKDCNSEEALELLHGLVSNGVSPDIVTYSSIIGVLS 604

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R D+VEEA+ +   +   G + +   Y  ++  LCK    D AI     M+S+   P++ 
Sbjct: 605 REDRVEEAIKMFHIVQDLGMRPKAVIYNKILLALCKRCNTDGAIDFFAYMVSNGCMPNEL 664

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
            + T+++ +A++   +E   L ++L    V  K
Sbjct: 665 TYITLIEGLANEDFLKETRDLLRELCSRGVLNK 697



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 213/419 (50%), Gaps = 38/419 (9%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + D  +   +L+  C+  +  D  +L   M  +N +P+      L+R   R   +E+A +
Sbjct: 278 QPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCRGGMVERAIQ 337

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL+ M   G   +T   N+++  +CK+G++  A   L+ M   GC PD I+Y T+L+ + 
Sbjct: 338 VLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNMGSYGCSPDTISYTTVLKGLC 397

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              +++ A    K+ +RK CPP  +T+   I  +C++  I +A  +++ M+  GC  +IV
Sbjct: 398 RAERWEDAKELLKEMVRKNCPPNEVTFNTFICILCQKGLIEQATMLIEQMSEHGCEVNIV 457

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+LVN  C QG+ D A+ +     S   +PN+ITY TLL  L +    DA  ++L  M
Sbjct: 458 TYNALVNGFCVQGRVDSALEL---FYSMPCKPNTITYTTLLTGLCNAERLDAAAELLAEM 514

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC-------------------- 393
            +   +P V T+N+L++  C+ GL+D AI    QM+   C                    
Sbjct: 515 LQKDCAPNVVTFNVLVSFFCQKGLMDEAIELVEQMMEHGCTPNLITYNTLLDGITKDCNS 574

Query: 394 ---------------QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
                           PDIVTY++++G L +E  + EA+++ H++      P  + YN +
Sbjct: 575 EEALELLHGLVSNGVSPDIVTYSSIIGVLSREDRVEEAIKMFHIVQDLGMRPKAVIYNKI 634

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +  L K+   + A+  +  M+ NG  P+++T+ TLI G    D ++E  DLL+E+  RG
Sbjct: 635 LLALCKRCNTDGAIDFFAYMVSNGCMPNELTYITLIEGLANEDFLKETRDLLRELCSRG 693



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 76/289 (26%), Positives = 145/289 (50%), Gaps = 3/289 (1%)

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
           RA  ++D     G +PD+     L+   C++G+  DA  V+      G   +   YNTL+
Sbjct: 92  RAARLVDRATSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRAAERSGTAVDVFAYNTLV 151

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                 G  DA  +++  M  A   P  +TY  +I GLC  G V  A++  + M+ + CQ
Sbjct: 152 AGYCRYGQLDAARRLIASMPVA---PDAYTYTPIIRGLCDRGRVGEALSLLDDMLHRGCQ 208

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P +VTY  +L A+CK     +A+++L  +    C+P ++TYN +I+G+ ++G ++ A   
Sbjct: 209 PSVVTYTVLLEAVCKSTGFGQAMEVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAREF 268

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             ++   G  PD +++ T++ G C A + E+  +L  E+ ++        + +++   C+
Sbjct: 269 LNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEELFAEMMEKNCMPNEVTFDMLVRFFCR 328

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              V+ AIQVLE M       + T+ + ++  +   G  ++A++    +
Sbjct: 329 GGMVERAIQVLEQMSGHGCAANTTLCNIVINTICKQGRVDDAFQFLNNM 377


>gi|302806733|ref|XP_002985098.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
 gi|300147308|gb|EFJ13973.1| hypothetical protein SELMODRAFT_121399 [Selaginella moellendorffii]
          Length = 659

 Score =  282 bits (722), Expect = 3e-73,   Method: Compositional matrix adjust.
 Identities = 145/450 (32%), Positives = 256/450 (56%), Gaps = 6/450 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N ++   C  GK+  A  ++ +M  R+ +PD     +LI G  + + +++A K++
Sbjct: 126 DAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLM 185

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  SG  PDT+ YN ++ GLCK+ Q+     LL+EM  +G EPD  +YNT++  + ++
Sbjct: 186 EKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCES 245

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK+++A    +  + K C P ++TY  L++  CK   +  A  +L+DM    C+P ++TY
Sbjct: 246 GKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITY 305

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L+    +  +  DA  V+ ++   G+ P+ +TYN LL  L   G  +   ++L++M E
Sbjct: 306 TTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVE 365

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P V TY+IL+NGLCK G VD A      M+ + CQP++VT+NT++   CK G ++E
Sbjct: 366 KDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDE 425

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
             ++L L+   SC+P ++TY+TLIDG  K   M+ A  +       GISPD  ++ +++ 
Sbjct: 426 GHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAIL------GISPDKASYSSMLE 479

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C   +VEEA +++  + K+G    +S Y L+I GLC  ++ D A+++L++M     +P
Sbjct: 480 GLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEP 539

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +   +S ++  +      E+A  +   ++E
Sbjct: 540 NLYTYSILINGLCKTKRVEDAINVLDVMLE 569



 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 145/464 (31%), Positives = 237/464 (51%), Gaps = 29/464 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N +L   C + +L + SKL++ M    + PD      ++  L    + E+A K+L
Sbjct: 196 DTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKIL 255

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+     PD +TYN ++ G CK  ++  A  LL++M    C P VITY T++      
Sbjct: 256 EKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRA 315

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +   A    +D  + G  P L+TY  L++ +CK   +  A E+L+ M  + C+PD+VTY
Sbjct: 316 DRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTY 375

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + LVN  CK GK DDA L++  +L RG +PN +T+NT++      G  D   K+L++M E
Sbjct: 376 SILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKE 435

Query: 356 ASHSPTVFTYNILINGLCKY-----------------------------GLVDRAINSFN 386
            S +P V TY+ LI+G CK                              G V+ A    +
Sbjct: 436 VSCTPDVVTYSTLIDGYCKANRMQDAFAILGISPDKASYSSMLEGLCSTGKVEEAQEVMD 495

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M  + C P    Y  ++G LC     +EAL++L +++   C P L TY+ LI+GL K  
Sbjct: 496 LMTKQGCPPTSSHYALIIGGLCDVERGDEALKMLQVMSERGCEPNLYTYSILINGLCKTK 555

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +E A+ +   M+E G  PD  T+ +LI GFC+ ++++ A    K +   G +    AY 
Sbjct: 556 RVEDAINVLDVMLEKGCVPDVATYTSLIDGFCKINKMDAAYQCFKTMRDSGCEPDKLAYN 615

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           ++I G C+S  V+ AI+V++LM+     PD   + ++++ +  +
Sbjct: 616 ILISGFCQSGNVEKAIEVMQLMLEKGCNPDAATYFSLMRSLTTE 659



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/472 (29%), Positives = 237/472 (50%), Gaps = 12/472 (2%)

Query: 89  KKLRGLTITKKSH-DPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN 147
           + L G +  ++   DPS PS+          T   ++  F   G      ++ + M  R 
Sbjct: 4   RPLEGYSFFRERFSDPSKPSN---------STYGALITGFSRAGNSKMVLEIANEMLARR 54

Query: 148 QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI 207
             PD      +++   +I  +++A    +  +     P   TY +++ GLC+  +I  A 
Sbjct: 55  FSPDVITHNTILKAYCQIGDLDRALSHFRGKMWCS--PTAFTYCILIHGLCQCQRIDEAY 112

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
            LLDEM    C PD   YN ++  +   GK   A    K  L + C P +ITYT LI   
Sbjct: 113 QLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNVLKMMLERSCVPDVITYTSLIVGC 172

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   +  A ++++ M   G +PD V YN+L+N  CKQ + ++   ++  ++  G EP++
Sbjct: 173 CQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDT 232

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
            +YNT++  L   G ++   KIL+ M E    P V TYN L++G CK   +D A      
Sbjct: 233 FSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVTYNSLMDGFCKVSKMDEAERLLED 292

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           MV + C P ++TY T++G   +   L +A +++  +  +  SP L+TYN L+DGL K G 
Sbjct: 293 MVGRRCAPTVITYTTLIGGFSRADRLADAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGK 352

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +E+A  L   M+E   +PD +T+  L+ G C+  +V++A  LL+ + +RG +     +  
Sbjct: 353 LEEAHELLEVMVEKDCAPDVVTYSILVNGLCKLGKVDDARLLLEMMLERGCQPNLVTFNT 412

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +I G CK+ KVD   +VLELM      PD   +ST++         ++A+ +
Sbjct: 413 MIDGFCKAGKVDEGHKVLELMKEVSCTPDVVTYSTLIDGYCKANRMQDAFAI 464



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/416 (30%), Positives = 211/416 (50%), Gaps = 37/416 (8%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P   TY  ++ G  + G  +  + + +EM      PDVIT+NTIL+     G   +A+  
Sbjct: 22  PSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALSH 81

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           ++ ++   C P   TY ILI  +C+   I  A ++LD+M  + C PD   YN L+   CK
Sbjct: 82  FRGKM--WCSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCK 139

Query: 305 QGKYDDAVLVINNLLSR-----------------------------------GMEPNSIT 329
            GK D A  V+  +L R                                   G+ P+++ 
Sbjct: 140 MGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVA 199

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YN LL+ L  +   + V K+L+ M EA   P  F+YN ++  LC+ G  + A     +M+
Sbjct: 200 YNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMI 259

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            K C PD+VTYN+++   CK   ++EA +LL  + G  C+P +ITY TLI G ++   + 
Sbjct: 260 EKKCGPDVVTYNSLMDGFCKVSKMDEAERLLEDMVGRRCAPTVITYTTLIGGFSRADRLA 319

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A  +   M + GISPD +T+  L+ G C+A ++EEA +LL+ + ++        Y +++
Sbjct: 320 DAYRVMEDMFKAGISPDLVTYNCLLDGLCKAGKLEEAHELLEVMVEKDCAPDVVTYSILV 379

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +GLCK  KVD A  +LE+M+    +P+   F+T++      G  +E +K+ + + E
Sbjct: 380 NGLCKLGKVDDARLLLEMMLERGCQPNLVTFNTMIDGFCKAGKVDEGHKVLELMKE 435



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 158/325 (48%), Gaps = 37/325 (11%)

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +   F++++      P   TY  LI    +       +E+ ++M     SPD++T+N+++
Sbjct: 7   EGYSFFRERFSDPSKPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTIL 66

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C+ G  D A                     L H  G   C                S
Sbjct: 67  KAYCQIGDLDRA---------------------LSHFRGKMWC----------------S 89

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           PT FTY ILI+GLC+   +D A    ++M+ K+C PD   YN ++  LCK G ++ A  +
Sbjct: 90  PTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLCKMGKIDAARNV 149

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L ++   SC P +ITY +LI G  +   +++A  L  +M E+G++PD + +  L+ G C+
Sbjct: 150 LKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTVAYNALLNGLCK 209

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
            +Q+EE   LL+E+ + G +    +Y  V+  LC+S K + A ++LE MI  +  PD   
Sbjct: 210 QNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKMIEKKCGPDVVT 269

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLI 564
           +++++         +EA +L + ++
Sbjct: 270 YNSLMDGFCKVSKMDEAERLLEDMV 294



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 131/244 (53%), Gaps = 2/244 (0%)

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           +P++ TY  L+      G    V +I + M     SP V T+N ++   C+ G +DRA++
Sbjct: 21  KPSNSTYGALITGFSRAGNSKMVLEIANEMLARRFSPDVITHNTILKAYCQIGDLDRALS 80

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F   +   C P   TY  ++  LC+   ++EA QLL  +    C P    YN LI GL 
Sbjct: 81  HFRGKMW--CSPTAFTYCILIHGLCQCQRIDEAYQLLDEMIQKDCHPDAAVYNCLIAGLC 138

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G ++ A  +   M+E    PD IT+ +LI G C+ + ++EA  L++++ + G      
Sbjct: 139 KMGKIDAARNVLKMMLERSCVPDVITYTSLIVGCCQTNALDEARKLMEKMKESGLTPDTV 198

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           AY  +++GLCK  +++   ++LE M+ +  +PD   ++T+V  + + G  EEA K+ +K+
Sbjct: 199 AYNALLNGLCKQNQLEEVSKLLEEMVEAGREPDTFSYNTVVACLCESGKYEEAGKILEKM 258

Query: 564 IEWK 567
           IE K
Sbjct: 259 IEKK 262



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 63/187 (33%), Positives = 104/187 (55%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D+ + + +L+  CS GK+ +A +++D+M ++   P       +I GL  ++R ++A 
Sbjct: 467 ISPDKASYSSMLEGLCSTGKVEEAQEVMDLMTKQGCPPTSSHYALIIGGLCDVERGDEAL 526

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+LQ+M   G  P+  TY++++ GLCK  ++  AI +LD M   GC PDV TY +++   
Sbjct: 527 KMLQVMSERGCEPNLYTYSILINGLCKTKRVEDAINVLDVMLEKGCVPDVATYTSLIDGF 586

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K   A   +K     GC P  + Y ILI   C+   + +AIEV+  M  +GC+PD 
Sbjct: 587 CKINKMDAAYQCFKTMRDSGCEPDKLAYNILISGFCQSGNVEKAIEVMQLMLEKGCNPDA 646

Query: 293 VTYNSLV 299
            TY SL+
Sbjct: 647 ATYFSLM 653


>gi|62320494|dbj|BAD95034.1| hypothetical protein [Arabidopsis thaliana]
          Length = 602

 Score =  281 bits (719), Expect = 6e-73,   Method: Compositional matrix adjust.
 Identities = 154/478 (32%), Positives = 244/478 (51%), Gaps = 36/478 (7%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           KI    C  G   ++  L++ M R+   PD   C  LI+G   +  I KA +V++I+   
Sbjct: 94  KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE-K 152

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
            G PD   YN ++ G CK  +I  A  +LD M      PD +TYN ++ ++   GK   A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +      L   C P +ITYTILIE    + G+  A++++D+M   G  PD+ TYN+++  
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK------------- 348
            CK+G  D A  ++ NL  +G EP+ I+YN LL +L ++G W+  +K             
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 349 ----------------------ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
                                 +L +M E   +P  ++Y+ LI   C+ G +D AI    
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M+S  C PDIV YNTVL  LCK G  ++AL++   L    CSP   +YNT+   L   G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
              +A+ +  +MM NGI PD+IT+ ++I   CR   V+EA +LL ++           Y 
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +V+ G CK+ +++ AI VLE M+ +  +P++T ++ +++ +   G   EA +L   L+
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 206/380 (54%), Gaps = 4/380 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + CSRGKL  A K+++ +   N  P       LI   +    +++A K++
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PD  TYN ++ G+CK G +  A  ++  + + G EPDVI+YN +LR + + 
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGSEPDVISYNILLRALLNQ 311

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK+++          + C P ++TY+ILI  +C+   I  A+ +L  M  +G +PD  +Y
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+   C++G+ D A+  +  ++S G  P+ + YNT+L +L   G  D   +I   + E
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SP   +YN + + L   G   RA++   +M+S    PD +TYN+++  LC+EGM++E
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +LL  +      P ++TYN ++ G  K   +E A+ +   M+ NG  P++ T+  LI 
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551

Query: 476 GF----CRADQVEEAVDLLK 491
           G      RA+ +E A DL++
Sbjct: 552 GIGFAGYRAEAMELANDLVR 571



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 107/331 (32%), Positives = 187/331 (56%), Gaps = 1/331 (0%)

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G + +++   +  +RKG  P +I  T LI+       I +A+ V++ +   G  PD+  
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFA 160

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N  CK  + DDA  V++ + S+   P+++TYN ++ SL SRG  D   K+L+ + 
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
             +  PTV TY ILI      G VD A+   ++M+S+  +PD+ TYNT++  +CKEGM++
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A +++  L      P +I+YN L+  L  +G  E+   L  +M      P+ +T+  LI
Sbjct: 281 RAFEMVRNLELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              CR  ++EEA++LLK + ++G      +Y  +I   C+  ++D+AI+ LE MIS    
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   ++T++  +  +G  ++A +++ KL E
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGE 431



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 1/219 (0%)

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L+ M    ++P V     LI G      + +A+    +++ K  QPD+  YN ++   C
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFC 169

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K   +++A ++L  +     SP  +TYN +I  L  +G ++ A+ +  Q++ +   P  I
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  LI        V+EA+ L+ E+  RG K     Y  +I G+CK   VD A +++  +
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
                +PD   ++ +++ + + G  EE  KL  K+   K
Sbjct: 290 ELKGSEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328


>gi|18397002|ref|NP_566237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207286|sp|Q9SR00.1|PP213_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g04760, chloroplastic; Flags: Precursor
 gi|6175176|gb|AAF04902.1|AC011437_17 hypothetical protein [Arabidopsis thaliana]
 gi|15810359|gb|AAL07067.1| unknown protein [Arabidopsis thaliana]
 gi|22136960|gb|AAM91709.1| unknown protein [Arabidopsis thaliana]
 gi|332640611|gb|AEE74132.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 602

 Score =  281 bits (718), Expect = 8e-73,   Method: Compositional matrix adjust.
 Identities = 154/478 (32%), Positives = 244/478 (51%), Gaps = 36/478 (7%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           KI    C  G   ++  L++ M R+   PD   C  LI+G   +  I KA +V++I+   
Sbjct: 94  KIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILE-K 152

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
            G PD   YN ++ G CK  +I  A  +LD M      PD +TYN ++ ++   GK   A
Sbjct: 153 FGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLA 212

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +      L   C P +ITYTILIE    + G+  A++++D+M   G  PD+ TYN+++  
Sbjct: 213 LKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRG 272

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK------------- 348
            CK+G  D A  ++ NL  +G EP+ I+YN LL +L ++G W+  +K             
Sbjct: 273 MCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPN 332

Query: 349 ----------------------ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
                                 +L +M E   +P  ++Y+ LI   C+ G +D AI    
Sbjct: 333 VVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLE 392

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M+S  C PDIV YNTVL  LCK G  ++AL++   L    CSP   +YNT+   L   G
Sbjct: 393 TMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYNTMFSALWSSG 452

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
              +A+ +  +MM NGI PD+IT+ ++I   CR   V+EA +LL ++           Y 
Sbjct: 453 DKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDEAFELLVDMRSCEFHPSVVTYN 512

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +V+ G CK+ +++ AI VLE M+ +  +P++T ++ +++ +   G   EA +L   L+
Sbjct: 513 IVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIEGIGFAGYRAEAMELANDLV 570



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 121/380 (31%), Positives = 207/380 (54%), Gaps = 4/380 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + CSRGKL  A K+++ +   N  P       LI   +    +++A K++
Sbjct: 192 DTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVITYTILIEATMLEGGVDEALKLM 251

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PD  TYN ++ G+CK G +  A  ++  + + GCEPDVI+YN +LR + + 
Sbjct: 252 DEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNLELKGCEPDVISYNILLRALLNQ 311

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK+++          + C P ++TY+ILI  +C+   I  A+ +L  M  +G +PD  +Y
Sbjct: 312 GKWEEGEKLMTKMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSY 371

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+   C++G+ D A+  +  ++S G  P+ + YNT+L +L   G  D   +I   + E
Sbjct: 372 DPLIAAFCREGRLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGE 431

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SP   +YN + + L   G   RA++   +M+S    PD +TYN+++  LC+EGM++E
Sbjct: 432 VGCSPNSSSYNTMFSALWSSGDKIRALHMILEMMSNGIDPDEITYNSMISCLCREGMVDE 491

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +LL  +      P ++TYN ++ G  K   +E A+ +   M+ NG  P++ T+  LI 
Sbjct: 492 AFELLVDMRSCEFHPSVVTYNIVLLGFCKAHRIEDAINVLESMVGNGCRPNETTYTVLIE 551

Query: 476 GF----CRADQVEEAVDLLK 491
           G      RA+ +E A DL++
Sbjct: 552 GIGFAGYRAEAMELANDLVR 571



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 188/331 (56%), Gaps = 1/331 (0%)

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G + +++   +  +RKG  P +I  T LI+       I +A+ V++ +   G  PD+  
Sbjct: 102 SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVMEILEKFG-QPDVFA 160

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N  CK  + DDA  V++ + S+   P+++TYN ++ SL SRG  D   K+L+ + 
Sbjct: 161 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLL 220

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
             +  PTV TY ILI      G VD A+   ++M+S+  +PD+ TYNT++  +CKEGM++
Sbjct: 221 SDNCQPTVITYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 280

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A +++  L    C P +I+YN L+  L  +G  E+   L  +M      P+ +T+  LI
Sbjct: 281 RAFEMVRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 340

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              CR  ++EEA++LLK + ++G      +Y  +I   C+  ++D+AI+ LE MIS    
Sbjct: 341 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 400

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   ++T++  +  +G  ++A +++ KL E
Sbjct: 401 PDIVNYNTVLATLCKNGKADQALEIFGKLGE 431



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/219 (26%), Positives = 107/219 (48%), Gaps = 1/219 (0%)

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L+ M    ++P V     LI G      + +A+    +++ K  QPD+  YN ++   C
Sbjct: 111 LLETMVRKGYNPDVILCTKLIKGFFTLRNIPKAVRVM-EILEKFGQPDVFAYNALINGFC 169

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K   +++A ++L  +     SP  +TYN +I  L  +G ++ A+ +  Q++ +   P  I
Sbjct: 170 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLNQLLSDNCQPTVI 229

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  LI        V+EA+ L+ E+  RG K     Y  +I G+CK   VD A +++  +
Sbjct: 230 TYTILIEATMLEGGVDEALKLMDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMVRNL 289

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
                +PD   ++ +++ + + G  EE  KL  K+   K
Sbjct: 290 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 328


>gi|357142605|ref|XP_003572629.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 543

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 157/483 (32%), Positives = 260/483 (53%), Gaps = 46/483 (9%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N+ L+    RG+L  A +L+  ++   + P    C  LI+ L    R+  A +V++ +  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEALGP 124

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           S  +   ITYN MV G C+ G I +A  ++D +  +   PD  TYN ++R +   G    
Sbjct: 125 SATI---ITYNTMVNGYCRAGNIDAARRMIDSVPFA---PDTFTYNPLIRALCVRGCVLD 178

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  + D L +GC P ++TY+IL++  CK+ G  +A+ +LD+M  +GC PDIVTYN L+N
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK------------ 348
             C QG   +A+ V+N+L S G +P+++TY  +L SL S   W+  DK            
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 349 -----------------------ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
                                  +L  M+E   +P + TY+ +++GLCK   VD AI   
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 386 NQ----MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
            +    MVSKNC PD VT+NT++ +LC++G+ + A++++  ++   C P + TYN ++DG
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDG 418

Query: 442 LAKKGC-MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
              K C  E+A+ L   M+ NG+ PD  T+++L +G  R D++E A+ + + +   G   
Sbjct: 419 FLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSP 478

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  ++ GLCK  + D+AI     M+S+   PD++ +  +V+ +A +G  EEA +L 
Sbjct: 479 DKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELL 538

Query: 561 QKL 563
             L
Sbjct: 539 GNL 541



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 205/385 (53%), Gaps = 6/385 (1%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           PF   D  T N +++  C RG + DA  + D M  R   P       L+    +    ++
Sbjct: 155 PFAP-DTFTYNPLIRALCVRGCVLDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQ 213

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  +L  M   G  PD +TYN+++  +C +G +  A+ +L+ +   GC+PD +TY  +L+
Sbjct: 214 AVVLLDEMRSKGCEPDIVTYNVLINAMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLK 273

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
           ++  + ++++A           C P  +T+  +I  +C++  + RA +VL  M+  GC+P
Sbjct: 274 SLCSSERWEEADKLLTKMFSNDCAPDEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTP 333

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLL----SRGMEPNSITYNTLLHSLGSRGCWDAV 346
           DI+TY+S+++  CK+ + D+A+ ++  LL    S+   P+ +T+NT++ SL  +G +D  
Sbjct: 334 DIITYSSIMDGLCKERRVDEAIKLLKELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRA 393

Query: 347 DKILDIMNEASHSPTVFTYNILING-LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
            K++D M+E    P + TYN +++G LCK    + A++  N MVS    PD  TY ++  
Sbjct: 394 IKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDLLNLMVSNGLCPDTTTYKSLAF 453

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            L +E  +  A+ +   +     SP  + YN ++ GL KK   + A+  +  M+ NG  P
Sbjct: 454 GLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCKKWRTDLAIDFFAYMVSNGCMP 513

Query: 466 DDITHRTLIWGFCRADQVEEAVDLL 490
           D+ T+  L+ G      +EEA +LL
Sbjct: 514 DESTYIILVEGIAYEGFLEEAKELL 538



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/353 (31%), Positives = 182/353 (51%), Gaps = 10/353 (2%)

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N  LR +   G+   A+         G  P +I   ILI+++C    +A A  V++ +  
Sbjct: 65  NRRLRGLVQRGELDGALRLVHSISGSGKDPAVIPCNILIKKLCADGRVADAERVVEAL-- 122

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
            G S  I+TYN++VN  C+ G  D A  +I+++      P++ TYN L+ +L  RGC   
Sbjct: 123 -GPSATIITYNTMVNGYCRAGNIDAARRMIDSV---PFAPDTFTYNPLIRALCVRGCVLD 178

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              + D M     SP+V TY+IL++  CK     +A+   ++M SK C+PDIVTYN ++ 
Sbjct: 179 ALAVFDDMLHRGCSPSVVTYSILLDATCKESGYKQAVVLLDEMRSKGCEPDIVTYNVLIN 238

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           A+C +G + EAL++L+ L    C P  +TY  ++  L      E+A  L  +M  N  +P
Sbjct: 239 AMCSQGDVGEALKVLNSLPSYGCKPDAVTYTPVLKSLCSSERWEEADKLLTKMFSNDCAP 298

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D++T   +I   C+   V  A  +L ++ + G       Y  ++ GLCK ++VD AI++L
Sbjct: 299 DEVTFNAVITSLCQKGFVGRATKVLAQMSEHGCTPDIITYSSIMDGLCKERRVDEAIKLL 358

Query: 526 -EL---MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            EL   M+S    PD   F+TI+  +   G+ + A K+  ++ E       TT
Sbjct: 359 KELLAEMVSKNCIPDQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITT 411



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 85/170 (50%), Gaps = 1/170 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRG-LIRIDRIEKASKV 174
           D+ T N I+ + C +G    A K++D M+    IPD      ++ G L +  + E+A  +
Sbjct: 373 DQVTFNTIITSLCQKGLFDRAIKVVDEMSEHGCIPDITTYNCIVDGFLCKSCKTEEALDL 432

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L +MV +G  PDT TY  +  GL +  ++  AI +   +   G  PD + YN IL  +  
Sbjct: 433 LNLMVSNGLCPDTTTYKSLAFGLSREDEMERAIGMFRRVQAMGLSPDKMLYNAILLGLCK 492

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
             +   AI F+   +  GC P   TY IL+E +  +  +  A E+L +++
Sbjct: 493 KWRTDLAIDFFAYMVSNGCMPDESTYIILVEGIAYEGFLEEAKELLGNLS 542


>gi|357125354|ref|XP_003564359.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 665

 Score =  280 bits (717), Expect = 1e-72,   Method: Compositional matrix adjust.
 Identities = 154/477 (32%), Positives = 253/477 (53%), Gaps = 41/477 (8%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L+   +R  L +A++L++    R + PD + C  LIR L R  R   A++VL+    SG 
Sbjct: 42  LRRLIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGA 101

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
             D   YN +V G C+ G++ +A  L+  M V    PD  TY  ++R + D G+   A+ 
Sbjct: 102 PVDVFAYNTLVAGYCRYGRLDAARRLIASMPVP---PDAYTYTPLIRGLCDRGRVGDALS 158

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
              D LR+ C P ++TYT+L+E VCK  G  +A++VLD+M  +GC+P+IVTYN ++N  C
Sbjct: 159 LLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMC 218

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD---------------- 347
           ++ + DDA  ++N L S G +P++++Y T+L  L +   W+ V+                
Sbjct: 219 REDRVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEV 278

Query: 348 -------------------KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
                              ++LD M+E   +      NI+IN +CK G VD A    N M
Sbjct: 279 TFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNM 338

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
            S  C PD ++Y TVL  LC+ G   +A +LL+ +   +C P  +T+NT I  L +KG +
Sbjct: 339 GSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLI 398

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           ++A++L  QM E G S   +T+  L+ GFC   +V+ A++L   +    N +    Y  +
Sbjct: 399 DQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGRVDSALELFNSLPCEPNTI---TYTTL 455

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + GLC ++++D A ++L  M+ +    +   F+ +V      G  EEA +L Q+++E
Sbjct: 456 LTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMME 512



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 237/451 (52%), Gaps = 3/451 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   +++  C RG++ DA  L+D M RR   P       L+  + +     +A 
Sbjct: 133 VPPDAYTYTPLIRGLCDRGRVGDALSLLDDMLRRECQPSVVTYTVLLEAVCKSSGFGQAM 192

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KVL  M   G  P+ +TYN+++ G+C+  ++  A  +L+ +S  G +PD ++Y T+L+ +
Sbjct: 193 KVLDEMRAKGCTPNIVTYNVIINGMCREDRVDDARQILNRLSSYGFQPDTVSYTTVLKGL 252

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +++     + + +   C P  +T+ +L+   C+   + RAIEVLD M+  GC+ + 
Sbjct: 253 CAAKRWEDVEVLFCEMVENNCVPNEVTFDMLVRFFCRGGMVERAIEVLDRMSEHGCTANT 312

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
              N ++N  CKQG+ DDA   +NN+ S G  P++I+Y T+L  L   G W+   ++L+ 
Sbjct: 313 TLCNIVINSICKQGRVDDAFEFLNNMGSYGCSPDTISYTTVLKGLCRAGRWEDAKELLNE 372

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M   +  P   T+N  I  LC+ GL+D+AI    QM    C   IVTYN ++   C +G 
Sbjct: 373 MVRKNCPPNEVTFNTFICILCQKGLIDQAILLIEQMPEYGCSVGIVTYNALVNGFCVQGR 432

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ AL+   L N   C P  ITY TL+ GL     ++ A  L  +MM+N    + +T   
Sbjct: 433 VDSALE---LFNSLPCEPNTITYTTLLTGLCHAERLDAAAELLAEMMQNDCPLNVVTFNV 489

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+  FC+   VEEA++L++++ + G       +  ++ G+ +    + A+++L  ++S  
Sbjct: 490 LVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNSEEALELLHGLVSKG 549

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              D   +S+IV  ++ +   EEA +++  +
Sbjct: 550 ISLDTITYSSIVDVLSREDRIEEAVQMFHAV 580



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 94/370 (25%), Positives = 180/370 (48%), Gaps = 3/370 (0%)

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           L  R  +  A  L++  +  G  PDV     ++R +   G+   A    +     G P  
Sbjct: 45  LIARDDLAEAARLVERSTSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEGSGAPVD 104

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           +  Y  L+   C+   +  A  ++  M +    PD  TY  L+   C +G+  DA+ +++
Sbjct: 105 VFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPLIRGLCDRGRVGDALSLLD 161

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
           ++L R  +P+ +TY  LL ++     +    K+LD M     +P + TYN++ING+C+  
Sbjct: 162 DMLRRECQPSVVTYTVLLEAVCKSSGFGQAMKVLDEMRAKGCTPNIVTYNVIINGMCRED 221

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            VD A    N++ S   QPD V+Y TVL  LC      +   L   +  ++C P  +T++
Sbjct: 222 RVDDARQILNRLSSYGFQPDTVSYTTVLKGLCAAKRWEDVEVLFCEMVENNCVPNEVTFD 281

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            L+    + G +E+A+ +  +M E+G + +      +I   C+  +V++A + L  +G  
Sbjct: 282 MLVRFFCRGGMVERAIEVLDRMSEHGCTANTTLCNIVINSICKQGRVDDAFEFLNNMGSY 341

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G      +Y  V+ GLC++ + + A ++L  M+     P++  F+T +  +   G+ ++A
Sbjct: 342 GCSPDTISYTTVLKGLCRAGRWEDAKELLNEMVRKNCPPNEVTFNTFICILCQKGLIDQA 401

Query: 557 YKLWQKLIEW 566
             L +++ E+
Sbjct: 402 ILLIEQMPEY 411



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/245 (23%), Positives = 111/245 (45%), Gaps = 38/245 (15%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC +G++  A +L + +      P+      L+ GL   +R++ A+++L  M
Sbjct: 419 TYNALVNGFCVQGRVDSALELFNSLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEM 475

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +    + +T+N++V   C++G +  AI L+ +M   GC P++IT+NT+L  + ++   
Sbjct: 476 MQNDCPLNVVTFNVLVSFFCQKGFVEEAIELVQQMMEHGCTPNLITFNTLLDGITEDCNS 535

Query: 239 KQAIGFWKDQLRKGCP-----------------------------------PYLITYTIL 263
           ++A+      + KG                                     P  + Y  +
Sbjct: 536 EEALELLHGLVSKGISLDTITYSSIVDVLSREDRIEEAVQMFHAVQDMGMRPKAVMYNKI 595

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           +  +CK+C   RAI+    M    C P+  TY  L+    ++G   +A  V++ L SRG+
Sbjct: 596 LSALCKRCETDRAIDFFAHMVSNSCMPNESTYVILIEGLAREGLLKEARYVLSELCSRGV 655

Query: 324 EPNSI 328
              S+
Sbjct: 656 LSKSL 660


>gi|326505926|dbj|BAJ91202.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 669

 Score =  279 bits (714), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 143/442 (32%), Positives = 242/442 (54%), Gaps = 6/442 (1%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L+   +R  L +A++L++  + R + PD + C  LIR L R  R   A++VL+    SG 
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
             D   YN +V G C+ G++ +A  L+  M V    PD  TY  I+R + D G+   A+ 
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASMPVP---PDAYTYTPIIRGLCDRGRVGDALA 162

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
              D L++GC P ++TYT+L+E VCK  G   A+ VLD+M  +GC+P+IVTYN ++N  C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           ++G+ DDA  ++N L S G +P+ ++Y T+L  L +   WD V  +   M +    P   
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           T+++L+   C+ G+V+RAI    QM    C P+    N V+ A+CK+G +++A   L+ +
Sbjct: 283 TFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNM 342

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
               C+P  I+Y T++ GL + G  E A  L  +M+     P+++T  T I   C+   +
Sbjct: 343 GMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLI 402

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           E+A+ L++ + + G  +    Y  ++HG C   +VD A   LEL  +   +P+   ++T+
Sbjct: 403 EQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA---LELFNNLPCEPNTITYTTL 459

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           +  +      + A +L   +I+
Sbjct: 460 LTGLCHAERLDAAAELLAGMIQ 481



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 235/445 (52%), Gaps = 6/445 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            K+++N C RG+ +DA++++          D      L+ G  R  R++ A +++  M +
Sbjct: 78  TKLIRNLCRRGRTSDAARVLRTAEASGAPVDVFAYNTLVAGYCRYGRLDAARRLIASMPV 137

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PD  TY  ++ GLC RG++  A+ALLD+M   GC+P V+TY  +L  +  +  F +
Sbjct: 138 P---PDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGE 194

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    +   KGC P ++TY ++I  +C++  +  A E+L+ ++  G  PDIV+Y +++ 
Sbjct: 195 AMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLK 254

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C   ++DD  ++   ++ +   PN +T++ L+      G  +   ++L  M++   +P
Sbjct: 255 GLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTP 314

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
                NI+IN +CK G VD A +  N M    C PD ++Y TVL  LC+ G    A +LL
Sbjct: 315 NTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELL 374

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +   +C P  +T+NT I  L +KG +E+A+ L   M E G S   +T+  L+ GFC  
Sbjct: 375 PEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQ 434

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +V+ A++L   +    N +    Y  ++ GLC ++++D A ++L  MI      +   F
Sbjct: 435 GRVDSALELFNNLPCEPNTI---TYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTF 491

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           + +V      G  EEA +L  +++E
Sbjct: 492 NVLVSFFCQKGFVEEAMELVNQMME 516



 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 141/526 (26%), Positives = 256/526 (48%), Gaps = 67/526 (12%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   I++  C RG++ DA  L+D M +R   P       L+  + +     +A 
Sbjct: 137 VPPDAYTYTPIIRGLCDRGRVGDALALLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAM 196

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL  M   G  P+ +TYN+++ G+C+ G++  A  +L+ +S  G +PD+++Y T+L+ +
Sbjct: 197 NVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGL 256

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               ++      + + + K C P  +T+ +L+   C+   + RAI+VL  M+  GC+P+ 
Sbjct: 257 CAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNT 316

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNL--------------LSRGM--------------- 323
              N ++N  CKQG+ DDA   +NN+              + RG+               
Sbjct: 317 TLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPE 376

Query: 324 ------EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
                  PN +T+NT +  L  +G  +   K++++M E   S  + TYN L++G C  G 
Sbjct: 377 MVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGR 436

Query: 378 VDRAINSFNQ--------------------------------MVSKNCQPDIVTYNTVLG 405
           VD A+  FN                                 M+ K+C  + VT+N ++ 
Sbjct: 437 VDSALELFNNLPCEPNTITYTTLLTGLCHAERLDAAAELLAGMIQKDCPLNAVTFNVLVS 496

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             C++G + EA++L++ +    C+P LIT+NTL+DG+ K    E+A+ L   ++  G+S 
Sbjct: 497 FFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSL 556

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D IT+ +++    R D+ EEA+ +L  +   G + +   Y  ++  LCK  + D AI   
Sbjct: 557 DTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFF 616

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
             M+S+   P+++ +  +++ +A +G+ +EA  +  +L    V  K
Sbjct: 617 AYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGVLSK 662



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 100/370 (27%), Positives = 182/370 (49%), Gaps = 3/370 (0%)

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           L  R  +  A  L++  S  G  PDV     ++R +   G+   A    +     G P  
Sbjct: 49  LIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGAPVD 108

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           +  Y  L+   C+   +  A  ++  M +    PD  TY  ++   C +G+  DA+ +++
Sbjct: 109 VFAYNTLVAGYCRYGRLDAARRLIASMPV---PPDAYTYTPIIRGLCDRGRVGDALALLD 165

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
           ++L RG +P+ +TY  LL ++     +     +LD M     +P + TYN++ING+C+ G
Sbjct: 166 DMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREG 225

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            VD A    N++ S   QPDIV+Y TVL  LC     ++   L   +    C P  +T++
Sbjct: 226 RVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFD 285

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            L+    + G +E+A+ +  QM ++G +P+      +I   C+  +V++A D L  +G  
Sbjct: 286 MLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMY 345

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G      +Y  V+ GLC++ + + A ++L  M+     P++  F+T +  +   G+ E+A
Sbjct: 346 GCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQA 405

Query: 557 YKLWQKLIEW 566
            KL + + E+
Sbjct: 406 IKLIELMPEY 415



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 56/242 (23%), Positives = 113/242 (46%), Gaps = 3/242 (1%)

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           L  L +R       ++++  +    +P V+    LI  LC+ G    A        +   
Sbjct: 46  LRRLIARDDLAEAARLVETSSSRGEAPDVYLCTKLIRNLCRRGRTSDAARVLRTAEASGA 105

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
             D+  YNT++   C+ G L+ A +L+  +      P   TY  +I GL  +G +  A+ 
Sbjct: 106 PVDVFAYNTLVAGYCRYGRLDAARRLIASM---PVPPDAYTYTPIIRGLCDRGRVGDALA 162

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L   M++ G  P  +T+  L+   C++    EA+++L E+  +G       Y ++I+G+C
Sbjct: 163 LLDDMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMC 222

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
           +  +VD A ++L  + S  ++PD   ++T++K +      ++   L+ ++++ K      
Sbjct: 223 REGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEV 282

Query: 574 TL 575
           T 
Sbjct: 283 TF 284



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 112/245 (45%), Gaps = 38/245 (15%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC +G++  A +L + +      P+      L+ GL   +R++ A+++L  M
Sbjct: 423 TYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAGM 479

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +      + +T+N++V   C++G +  A+ L+++M   GC P++IT+NT+L  +  +   
Sbjct: 480 IQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNS 539

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIE--------------------------------- 265
           ++A+      + KG     ITY+ +++                                 
Sbjct: 540 EEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKI 599

Query: 266 --QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
              +CK+C   +AI+    M   GC P+  TY  L+     +G   +A  V++ L ++G+
Sbjct: 600 LFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 659

Query: 324 EPNSI 328
              S+
Sbjct: 660 LSKSL 664


>gi|297833172|ref|XP_002884468.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297330308|gb|EFH60727.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 598

 Score =  278 bits (712), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 165/548 (30%), Positives = 267/548 (48%), Gaps = 59/548 (10%)

Query: 75  QDEWSSESHVLAVNKKLRGLTITKKSHD--PSLPSSDG------------PFVENDEKTN 120
           Q  +S+ SH L+ N+ L   + +  +HD   S  SS              P     + + 
Sbjct: 20  QKHYSNSSHGLSHNRSLLTFSNSNPNHDNGKSFSSSGARNLQATTTDAAIPTERRQQHSQ 79

Query: 121 N---------KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           +         KI    C  G   ++  L++ M R+   PD   C  LI+G   +  + KA
Sbjct: 80  SLGFRDTQMLKIFHRSCRSGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKA 139

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +V++I+    G PD   YN ++ G CK  +I  A  +LD M      PD +TYN ++ +
Sbjct: 140 VRVMEIL-EKFGQPDVFAYNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGS 198

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   GK   A+      L   C P +ITYTILIE    + G+  A+++LD+M   G  PD
Sbjct: 199 LCSRGKLDLALKVLDQLLSDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPD 258

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK--- 348
           + TYN+++   CK+G  D A  +I NL  +G EP+ I+YN LL +L ++G W+  +K   
Sbjct: 259 MFTYNTIIRGMCKEGMVDRAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMT 318

Query: 349 --------------------------------ILDIMNEASHSPTVFTYNILINGLCKYG 376
                                           +L +M E   +P  ++Y+ LI   C+ G
Sbjct: 319 KMFSEKCDPNVVTYSILITTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREG 378

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +D AI     M+S  C PDIV YNTVL  LCK G  ++AL++   L    CSP   +YN
Sbjct: 379 RLDVAIEFLETMISDGCLPDIVNYNTVLATLCKNGKADQALEIFGKLGEVGCSPNSSSYN 438

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           T+   L   G   +A+ +  +M+ NGI PD+IT+ ++I   CR   V++A +LL ++   
Sbjct: 439 TMFSALWSSGDKIRALHMILEMVSNGIDPDEITYNSMISCLCREGMVDKAFELLVDMRSC 498

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                   Y +V+ G CK+ +++ AI VL+ M+ +  +P++T ++ +++ +   G   EA
Sbjct: 499 EFHPSVVTYNIVLLGFCKAHRIEDAIDVLDSMVGNGCRPNETTYTVLIEGIGFAGYRAEA 558

Query: 557 YKLWQKLI 564
            +L   L+
Sbjct: 559 MELANDLV 566



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 108/331 (32%), Positives = 188/331 (56%), Gaps = 1/331 (0%)

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G + +++   +  +RKG  P +I  T LI+       + +A+ V++ +   G  PD+  
Sbjct: 98  SGNYIESLHLLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVMEILEKFG-QPDVFA 156

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N  CK  + DDA  V++ + S+   P+++TYN ++ SL SRG  D   K+LD + 
Sbjct: 157 YNALINGFCKMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLL 216

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
             +  PTV TY ILI      G VD A+   ++M+S+  +PD+ TYNT++  +CKEGM++
Sbjct: 217 SDNCQPTVITYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVD 276

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A +++  L    C P +I+YN L+  L  +G  E+   L  +M      P+ +T+  LI
Sbjct: 277 RAFEMIRNLELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEKCDPNVVTYSILI 336

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              CR  ++EEA++LLK + ++G      +Y  +I   C+  ++D+AI+ LE MIS    
Sbjct: 337 TTLCRDGKIEEAMNLLKLMKEKGLTPDAYSYDPLIAAFCREGRLDVAIEFLETMISDGCL 396

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   ++T++  +  +G  ++A +++ KL E
Sbjct: 397 PDIVNYNTVLATLCKNGKADQALEIFGKLGE 427



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/219 (27%), Positives = 107/219 (48%), Gaps = 1/219 (0%)

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L+ M    ++P V     LI G      V +A+    +++ K  QPD+  YN ++   C
Sbjct: 107 LLETMVRKGYNPDVILCTKLIKGFFTLRNVPKAVRVM-EILEKFGQPDVFAYNALINGFC 165

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K   +++A ++L  +     SP  +TYN +I  L  +G ++ A+ +  Q++ +   P  I
Sbjct: 166 KMNRIDDATRVLDRMRSKDFSPDTVTYNIMIGSLCSRGKLDLALKVLDQLLSDNCQPTVI 225

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  LI        V+EA+ LL E+  RG K     Y  +I G+CK   VD A +++  +
Sbjct: 226 TYTILIEATMLEGGVDEALKLLDEMLSRGLKPDMFTYNTIIRGMCKEGMVDRAFEMIRNL 285

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
                +PD   ++ +++ + + G  EE  KL  K+   K
Sbjct: 286 ELKGCEPDVISYNILLRALLNQGKWEEGEKLMTKMFSEK 324


>gi|242054609|ref|XP_002456450.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
 gi|241928425|gb|EES01570.1| hypothetical protein SORBIDRAFT_03g036550 [Sorghum bicolor]
          Length = 669

 Score =  278 bits (710), Expect = 8e-72,   Method: Compositional matrix adjust.
 Identities = 154/491 (31%), Positives = 257/491 (52%), Gaps = 42/491 (8%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMAR-RNQIPDFHFCINLIRGLIRIDRIE 169
           P   N     +  L+   +R  L  A +L++       + PD + C  LIR L R  R  
Sbjct: 34  PESPNAPNPASAHLRRLIAREDLAGAVRLVERSGSCDGEAPDVYLCTKLIRNLCRRGRTS 93

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A++VL+    SG   D   YN +V G C+ G + +A  L+  M V+   PD  TY  ++
Sbjct: 94  DAARVLRAAEGSGSPVDVFAYNTLVAGYCRYGHLDAARRLIGSMPVA---PDAYTYTPLI 150

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           R + D G+   A+    D LR+GC P ++TYT+L+E +C+  G  +A+ VLD+M  +GC+
Sbjct: 151 RVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAMAVLDEMRAKGCT 210

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P+IVTYN ++N  C++G+ DDA  ++N L S G +P++++Y TLL  L +   WD V+++
Sbjct: 211 PNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGLCASKRWDDVEEL 270

Query: 350 LDIMNEASHSPTVFTY-----------------------------------NILINGLCK 374
              M E +  P   T+                                   NI+IN +CK
Sbjct: 271 FAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNTTLCNIVINSICK 330

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G VD A    N M S  C PD ++Y TVL  LC+    ++A +LL+ +  ++C P  +T
Sbjct: 331 QGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNEMVRNNCPPNEVT 390

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           +NT I  L +KG +E+A++L  QM E+G +   +T+  L+ GFC    ++ A++L + + 
Sbjct: 391 FNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGHIDSALELFRSMP 450

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
            + N +    Y  ++ GLC ++++D A +++  M+     P+   F+ +V      G  E
Sbjct: 451 CKPNTI---TYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVSFFCQKGFLE 507

Query: 555 EAYKLWQKLIE 565
           EA +L ++++E
Sbjct: 508 EAIELVEQMME 518



 Score =  251 bits (641), Expect = 8e-64,   Method: Compositional matrix adjust.
 Identities = 145/529 (27%), Positives = 255/529 (48%), Gaps = 67/529 (12%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   +++  C RG++ DA  L+D M RR   P+      L+  + R    E+A 
Sbjct: 139 VAPDAYTYTPLIRVLCDRGRVADALSLLDDMLRRGCQPNVVTYTVLLEAMCRNSGFEQAM 198

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL  M   G  P+ +TYN+++ G+C+ G++  A  LL+ +   G +PD ++Y T+L+ +
Sbjct: 199 AVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDARELLNRLPSYGFQPDTVSYTTLLKGL 258

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD----------- 281
             + ++      + + + K C P  +T+ +LI   C+   + RAI+VL+           
Sbjct: 259 CASKRWDDVEELFAEMMEKNCMPNEVTFDMLIRFFCRGGMVERAIQVLEQMTEHGCATNT 318

Query: 282 ------------------------DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                   DM   GC+PD ++Y +++   C+  ++DDA  ++N 
Sbjct: 319 TLCNIVINSICKQGRVDDAFKLLNDMGSYGCNPDTISYTTVLKGLCRAERWDDAKELLNE 378

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           ++     PN +T+NT +  L  +G  +    +++ M+E   +  V TYN L+NG C  G 
Sbjct: 379 MVRNNCPPNEVTFNTFICILCQKGLIEQAIMLIEQMSEHGCTVGVVTYNALVNGFCVQGH 438

Query: 378 VDRAINSFNQMVSK--------------------------------NCQPDIVTYNTVLG 405
           +D A+  F  M  K                                +C P++VT+N ++ 
Sbjct: 439 IDSALELFRSMPCKPNTITYTTLLTGLCNAERLDGAAELVAEMLRGDCPPNVVTFNVLVS 498

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             C++G L EA++L+  +    C+P LITYNTL+DG+ K    E A+ L   ++  G+SP
Sbjct: 499 FFCQKGFLEEAIELVEQMMEHGCTPNLITYNTLLDGITKDCSSEDALELLHGLVSKGVSP 558

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D IT  ++I    + D++EEAV L   +   G + +   Y  ++ GLCK  ++D AI   
Sbjct: 559 DVITFSSIIGILSKEDRIEEAVQLFHVVQDIGMRPKAVVYNKILLGLCKRCEIDNAIDFF 618

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             M+S+   P+++ +  +++ +A +G+ +EA  L   L    V  K  T
Sbjct: 619 AYMVSNGCMPNESTYIILIEGLAHEGLLKEAQDLLSVLCSRGVLNKNLT 667


>gi|413937324|gb|AFW71875.1| hypothetical protein ZEAMMB73_225396 [Zea mays]
          Length = 818

 Score =  275 bits (702), Expect = 6e-71,   Method: Compositional matrix adjust.
 Identities = 148/457 (32%), Positives = 253/457 (55%), Gaps = 4/457 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L++ C   +  +  +L+  M   N  PD      ++  L +   +++A +V+
Sbjct: 355 DAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVV 414

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G V D +TY+ ++ GLC  G++  A+ LL  +   GC+PD I Y T+L+ +   
Sbjct: 415 DHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCST 474

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            ++++A     + L   CPP  +T+  ++  +C++  + RAI V++ M+  GCSPDIVTY
Sbjct: 475 EQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTY 534

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N +++  C +   DDA+ ++++L S G +P+ +T+NTLL  L     W+  ++++  M  
Sbjct: 535 NCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMR 594

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           ++  P   T+N +I  LC+ GL+ +AI +   M    C P+  TY+ V+ AL K G    
Sbjct: 595 SNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNSSTYSIVVDALLKAGKAQA 654

Query: 416 ALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           AL+LL  + NG+   P LITYNT+I  L K G ME+A+ L   M+ NG+ PD  T+R+L 
Sbjct: 655 ALELLSGMTNGT---PDLITYNTVISNLTKAGKMEEALDLLRVMVSNGLCPDTTTYRSLA 711

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
           +G CR D  + AV +L+ +   G     + Y  V+ G C+ ++ D+AI     M+SS   
Sbjct: 712 YGVCREDGTDRAVRMLRRVQDTGLSPDTTFYNDVLLGFCRDRRTDLAIDCFAHMVSSGCM 771

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           PD++ +  +++ +A  G+ +EA +L   L    V +K
Sbjct: 772 PDESTYVILLEALAYGGLLDEAKRLLASLCSLGVLDK 808



 Score =  273 bits (697), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 158/492 (32%), Positives = 249/492 (50%), Gaps = 42/492 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQI 177
           T N ++  +C  G++ DA +LI+ M      P   F  N LIR L    RI  A  V   
Sbjct: 221 TYNTMVNGYCRAGRIEDARRLINGMP----FPPDTFTFNPLIRALCVRGRIPDALAVFDD 276

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G  P  +TY++++   CK    R A+ALLDEM   GCEPD++TYN ++  M + G 
Sbjct: 277 MLHRGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGD 336

Query: 238 FKQAIGFWKDQLRKGCPPYLITYT-----------------------------------I 262
             +A+    +    GC P  +TYT                                    
Sbjct: 337 VDEALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNT 396

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           ++  +C+Q  + RAIEV+D M+  GC  DIVTY+S+++  C  G+ DDAV +++ L S G
Sbjct: 397 IVTSLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 456

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +P++I Y T+L  L S   W+  ++++  M  +   P   T+N ++  LC+ GLVDRAI
Sbjct: 457 CKPDTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAI 516

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
               QM    C PDIVTYN ++  LC E  +++A++LL  L    C P ++T+NTL+ GL
Sbjct: 517 RVVEQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGL 576

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
                 E A  L   MM +   PD++T  T+I   C+   + +A++ LK + + G    +
Sbjct: 577 CGVDRWEDAEQLMANMMRSNCPPDELTFNTVITSLCQKGLLTQAIETLKIMAENGCVPNS 636

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           S Y +V+  L K+ K   A+++L  M +    PD   ++T++  +   G  EEA  L + 
Sbjct: 637 STYSIVVDALLKAGKAQAALELLSGMTNG--TPDLITYNTVISNLTKAGKMEEALDLLRV 694

Query: 563 LIEWKVFEKGTT 574
           ++   +    TT
Sbjct: 695 MVSNGLCPDTTT 706



 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 240/445 (53%), Gaps = 6/445 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++  CS G+++DA ++   +     +  ++  +N   G  R  RIE A +++  M  
Sbjct: 191 NILIKRLCSDGRVSDAERVFAALGPSATVVTYNTMVN---GYCRAGRIEDARRLINGMPF 247

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PDT T+N ++  LC RG+I  A+A+ D+M   GC P V+TY+ +L        ++Q
Sbjct: 248 P---PDTFTFNPLIRALCVRGRIPDALAVFDDMLHRGCSPSVVTYSILLDATCKESGYRQ 304

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    +   KGC P ++TY +LI  +C +  +  A+ +L ++   GC PD VTY  ++ 
Sbjct: 305 AMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSNLPSHGCKPDAVTYTPVLK 364

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C   ++ +   ++  + S    P+ +T+NT++ SL  +G  D   +++D M+E     
Sbjct: 365 SLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVTSLCQQGLVDRAIEVVDHMSEHGCVA 424

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TY+ +++GLC  G VD A+   +++ S  C+PD + Y TVL  LC       A +L+
Sbjct: 425 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSTEQWERAEELM 484

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  S C P  +T+NT++  L +KG +++A+ +  QM ENG SPD +T+  +I G C  
Sbjct: 485 AEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVVEQMSENGCSPDIVTYNCIIDGLCNE 544

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             +++A++LL ++   G K     +  ++ GLC   + + A Q++  M+ S   PD+  F
Sbjct: 545 SCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGVDRWEDAEQLMANMMRSNCPPDELTF 604

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           +T++  +   G+  +A +  + + E
Sbjct: 605 NTVITSLCQKGLLTQAIETLKIMAE 629



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 128/434 (29%), Positives = 214/434 (49%), Gaps = 66/434 (15%)

Query: 197 LCKRGQIRSAIALLDEMSVSG---CEP-------------------------------DV 222
           L +RG+I  A+ L D M+  G   C P                                V
Sbjct: 160 LVQRGEIDEALVLFDSMASGGGRNCPPVVPCNILIKRLCSDGRVSDAERVFAALGPSATV 219

Query: 223 ITYNT--------------------------------ILRTMFDNGKFKQAIGFWKDQLR 250
           +TYNT                                ++R +   G+   A+  + D L 
Sbjct: 220 VTYNTMVNGYCRAGRIEDARRLINGMPFPPDTFTFNPLIRALCVRGRIPDALAVFDDMLH 279

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           +GC P ++TY+IL++  CK+ G  +A+ +LD+M  +GC PDIVTYN L+N  C +G  D+
Sbjct: 280 RGCSPSVVTYSILLDATCKESGYRQAMALLDEMRAKGCEPDIVTYNVLINAMCNEGDVDE 339

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ +++NL S G +P+++TY  +L SL     W  V+++L  M   + +P   T+N ++ 
Sbjct: 340 ALNILSNLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELLAEMTSNNCAPDEVTFNTIVT 399

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
            LC+ GLVDRAI   + M    C  DIVTY+++L  LC  G +++A++LL  L    C P
Sbjct: 400 SLCQQGLVDRAIEVVDHMSEHGCVADIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKP 459

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             I Y T++ GL      E+A  L  +M+ +   PD++T  T++   C+   V+ A+ ++
Sbjct: 460 DTIAYTTVLKGLCSTEQWERAEELMAEMLCSDCPPDEVTFNTVVASLCQKGLVDRAIRVV 519

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +++ + G       Y  +I GLC    +D A+++L  + S   KPD   F+T++K +   
Sbjct: 520 EQMSENGCSPDIVTYNCIIDGLCNESCIDDAMELLSDLQSCGCKPDIVTFNTLLKGLCGV 579

Query: 551 GMTEEAYKLWQKLI 564
              E+A +L   ++
Sbjct: 580 DRWEDAEQLMANMM 593


>gi|242065464|ref|XP_002454021.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
 gi|241933852|gb|EES06997.1| hypothetical protein SORBIDRAFT_04g023230 [Sorghum bicolor]
          Length = 729

 Score =  273 bits (699), Expect = 1e-70,   Method: Compositional matrix adjust.
 Identities = 151/457 (33%), Positives = 256/457 (56%), Gaps = 4/457 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L++ C   +  +  +L   MA     PD      ++  L +   +++A KV+
Sbjct: 266 DAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVV 325

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G +PD +TY+ ++ GLC  G++  A+ LL  +   GC+PD I Y T+L+ +   
Sbjct: 326 DHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSI 385

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +++ A     + +   CPP  +T+  +I  +C++  + RAI+V++ M+  GC+PDIVTY
Sbjct: 386 EQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTY 445

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NS+++  C +   DDA+ +++NL S G +P+ +T+NTLL  L S   W+  ++++  M  
Sbjct: 446 NSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMH 505

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P   T+N +I  LC+ GL+ +AI +   M    C P+  TYN V+ AL K G   E
Sbjct: 506 SDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQSTYNIVVDALLKAGKTQE 565

Query: 416 ALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           AL+LL  + NG+   P LITYNT+I  + K G ME+A+ L   M+ NG+SPD IT+R+L 
Sbjct: 566 ALKLLSGMTNGT---PDLITYNTVISNITKAGKMEEALDLLRVMVSNGLSPDTITYRSLA 622

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
           +G CR D  + A+ +L  +   G     + Y  ++ G C++ + D+AI     M+SS   
Sbjct: 623 YGICREDGTDRAIRMLCRLQDMGLSPDATFYNDILLGFCQNWRTDIAIDCFAHMVSSGCM 682

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           PD++ +  +++ +A + + +EA +L   L    V +K
Sbjct: 683 PDESTYIILLEALAYECLLDEAKQLLVNLCSLGVLDK 719



 Score =  267 bits (682), Expect = 1e-68,   Method: Compositional matrix adjust.
 Identities = 156/482 (32%), Positives = 243/482 (50%), Gaps = 42/482 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQI 177
           T N ++  +C  G++ DA +LI  M      P   F  N LIR L    R+  A  V   
Sbjct: 132 TYNTMVNGYCRAGRIEDARRLISGMP----FPPDTFTFNPLIRALCVRGRVPDALAVFDD 187

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G  P  +TY++++   CK    R A+ LLDEM   GCEPD++TYN ++  M + G 
Sbjct: 188 MLHRGCSPSVVTYSILLDATCKASGYRQAMVLLDEMRAKGCEPDIVTYNVLINAMCNEGD 247

Query: 238 FKQAIGFWKDQLRKGCPPYLITYT-----------------------------------I 262
             +A+    D    GC P  +TYT                                    
Sbjct: 248 VDEALNILSDLPSHGCKPDAVTYTPVLKSLCGSERWKEVEELFAEMASNKCAPDEVTFNT 307

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           ++  +C+Q  + RAI+V+D M+  GC PDIVTY+S+++  C  G+ DDAV +++ L S G
Sbjct: 308 IVTSLCQQGLVDRAIKVVDHMSEHGCIPDIVTYSSILDGLCDVGRVDDAVELLSRLKSYG 367

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +P++I Y T+L  L S   W+  ++++  M  +   P   T+N +I  LC+ GLVDRAI
Sbjct: 368 CKPDTIAYTTVLKGLCSIEQWEHAEELMAEMVCSDCPPDEVTFNTVIASLCQKGLVDRAI 427

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
               QM    C PDIVTYN+++  LC E  +++A++LL  L    C P ++T+NTL+ GL
Sbjct: 428 KVVEQMSENGCNPDIVTYNSIIDGLCNERCIDDAMELLSNLQSYGCKPDIVTFNTLLKGL 487

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
                 E A  L   MM +   PD  T  T+I   C+   + +A++ LK + + G     
Sbjct: 488 CSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIMAENGCIPNQ 547

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           S Y +V+  L K+ K   A+++L  M +    PD   ++T++  +   G  EEA  L + 
Sbjct: 548 STYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKMEEALDLLRV 605

Query: 563 LI 564
           ++
Sbjct: 606 MV 607



 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 133/445 (29%), Positives = 239/445 (53%), Gaps = 6/445 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++  CS G++ DA ++   +     +  ++  +N   G  R  RIE A +++  M  
Sbjct: 102 NILIKRLCSGGRVADAERVFATLGASATVVTYNTMVN---GYCRAGRIEDARRLISGMPF 158

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PDT T+N ++  LC RG++  A+A+ D+M   GC P V+TY+ +L        ++Q
Sbjct: 159 P---PDTFTFNPLIRALCVRGRVPDALAVFDDMLHRGCSPSVVTYSILLDATCKASGYRQ 215

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    +   KGC P ++TY +LI  +C +  +  A+ +L D+   GC PD VTY  ++ 
Sbjct: 216 AMVLLDEMRAKGCEPDIVTYNVLINAMCNEGDVDEALNILSDLPSHGCKPDAVTYTPVLK 275

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C   ++ +   +   + S    P+ +T+NT++ SL  +G  D   K++D M+E    P
Sbjct: 276 SLCGSERWKEVEELFAEMASNKCAPDEVTFNTIVTSLCQQGLVDRAIKVVDHMSEHGCIP 335

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TY+ +++GLC  G VD A+   +++ S  C+PD + Y TVL  LC       A +L+
Sbjct: 336 DIVTYSSILDGLCDVGRVDDAVELLSRLKSYGCKPDTIAYTTVLKGLCSIEQWEHAEELM 395

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  S C P  +T+NT+I  L +KG +++A+ +  QM ENG +PD +T+ ++I G C  
Sbjct: 396 AEMVCSDCPPDEVTFNTVIASLCQKGLVDRAIKVVEQMSENGCNPDIVTYNSIIDGLCNE 455

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             +++A++LL  +   G K     +  ++ GLC   + + A Q++  M+ S   PD T F
Sbjct: 456 RCIDDAMELLSNLQSYGCKPDIVTFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTF 515

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           +T++  +   G+  +A +  + + E
Sbjct: 516 NTVITSLCQKGLLLQAIETLKIMAE 540



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 112/245 (45%), Gaps = 37/245 (15%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+  CS  +  DA +L+  M   +  PD      +I  L +   + +A + L+IM
Sbjct: 479 TFNTLLKGLCSVDRWEDAEQLMVNMMHSDCPPDATTFNTVITSLCQKGLLLQAIETLKIM 538

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G +P+  TYN++V  L K G+ + A+ LL  M+     PD+ITYNT++  +   GK 
Sbjct: 539 AENGCIPNQSTYNIVVDALLKAGKTQEALKLLSGMTNG--TPDLITYNTVISNITKAGKM 596

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL------------------ 280
           ++A+   +  +  G  P  ITY  L   +C++ G  RAI +L                  
Sbjct: 597 EEALDLLRVMVSNGLSPDTITYRSLAYGICREDGTDRAIRMLCRLQDMGLSPDATFYNDI 656

Query: 281 ---------DDMAIE--------GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
                     D+AI+        GC PD  TY  L+     +   D+A  ++ NL S G+
Sbjct: 657 LLGFCQNWRTDIAIDCFAHMVSSGCMPDESTYIILLEALAYECLLDEAKQLLVNLCSLGV 716

Query: 324 EPNSI 328
              S+
Sbjct: 717 LDKSL 721


>gi|224067108|ref|XP_002302359.1| predicted protein [Populus trichocarpa]
 gi|222844085|gb|EEE81632.1| predicted protein [Populus trichocarpa]
          Length = 375

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 145/362 (40%), Positives = 213/362 (58%), Gaps = 35/362 (9%)

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
           QL K C P +ITYTILIE  C + G+ +A+++LD+M   GC PD+VTYN LVN  CK+G+
Sbjct: 7   QLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGR 66

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D+A+  +N++ S G +PN IT+N +L S+ S G W   +K+L  M     SP+V T+NI
Sbjct: 67  LDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNI 126

Query: 368 LINGLCKYGLV-----------------------------------DRAINSFNQMVSKN 392
           LIN LC+ GL+                                   DRAI     MVS+ 
Sbjct: 127 LINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRG 186

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C PDIVTYNT+L ALCK+G ++ A++LL+ L+   CSP LITYNT+IDGL+K G  ++A+
Sbjct: 187 CYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAV 246

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  +M   G+ PD IT+ +LI G  R  +VEEA+    ++   G K     Y  ++ GL
Sbjct: 247 ELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGL 306

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
           CK+++ D AI  L  MIS   KP +  ++ +++ +A++G+ +EA +L  +L    V +K 
Sbjct: 307 CKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGVVKKS 366

Query: 573 TT 574
           + 
Sbjct: 367 SA 368



 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 125/373 (33%), Positives = 216/373 (57%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           +++D    +   PD      LI        + +A K+L  M   G  PD +TYN++V G+
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           CK G++  AI  L+ M   G +P+VIT+N ILR+M   G++  A     + +RKGC P +
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +T+ ILI  +C++  + RAI++L+ M   GC+P+ ++YN L++  CK+ K D A+  +  
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           ++SRG  P+ +TYNT+L +L   G  DA  ++L+ ++    SP + TYN +I+GL K G 
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGK 241

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            D+A+   ++M  K  +PD++TY++++  L +EG + EA++  H + G    P   TYN+
Sbjct: 242 TDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNS 301

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           ++ GL K    ++A+     M+  G  P ++++  LI G       +EA++LL E+  RG
Sbjct: 302 IMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRG 361

Query: 498 NKMRNSAYRLVIH 510
              ++SA ++V+ 
Sbjct: 362 VVKKSSAEQVVVR 374



 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 119/346 (34%), Positives = 197/346 (56%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           PD ITY +++   C    +  A+ LLDEM   GC+PDV+TYN ++  M   G+  +AI F
Sbjct: 14  PDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKF 73

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
                  G  P +IT+ I++  +C       A ++L +M  +GCSP +VT+N L+NF C+
Sbjct: 74  LNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCR 133

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           +G    A+ ++  + + G  PNS++YN LLH        D   + L+IM      P + T
Sbjct: 134 KGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVT 193

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN ++  LCK G VD A+   NQ+ SK C P ++TYNTV+  L K G  ++A++LLH + 
Sbjct: 194 YNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMR 253

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
           G    P +ITY++LI GL+++G +E+A+  +  +   G+ P+  T+ ++++G C+A Q +
Sbjct: 254 GKGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTD 313

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            A+D L  +  +G K    +Y ++I G+        A+++L  + S
Sbjct: 314 RAIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCS 359



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 115/348 (33%), Positives = 182/348 (52%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +++  C+   +  A KL+D M  R   PD      L+ G+ +  R+++A K L
Sbjct: 15  DVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGMCKEGRLDEAIKFL 74

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ IT+N+++  +C  G+   A  LL EM   GC P V+T+N ++  +   
Sbjct: 75  NSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSVVTFNILINFLCRK 134

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +AI   +     GC P  ++Y  L+   CK+  + RAI+ L+ M   GC PDIVTY
Sbjct: 135 GLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTY 194

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++   CK GK D AV ++N L S+G  P  ITYNT++  L   G  D   ++L  M  
Sbjct: 195 NTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRG 254

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V TY+ LI GL + G V+ AI  F+ +     +P+  TYN+++  LCK    + 
Sbjct: 255 KGLKPDVITYSSLIAGLSREGKVEEAIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDR 314

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           A+  L  +    C P  ++Y  LI+G+A +G  ++A+ L  ++   G+
Sbjct: 315 AIDFLAYMISKGCKPTEVSYTILIEGIANEGLAKEALELLNELCSRGV 362



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 89/285 (31%), Positives = 154/285 (54%)

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           +EVLD    + C PD++TY  L+  +C +     A+ +++ + SRG +P+ +TYN L++ 
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           +   G  D   K L+ M      P V T+NI++  +C  G    A     +MV K C P 
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPS 120

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +VT+N ++  LC++G+L  A+ +L  +    C+P  ++YN L+ G  K+  M++A+    
Sbjct: 121 VVTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLE 180

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M+  G  PD +T+ T++   C+  +V+ AV+LL ++  +G       Y  VI GL K  
Sbjct: 181 IMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVG 240

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           K D A+++L  M     KPD   +S+++  ++ +G  EEA K + 
Sbjct: 241 KTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEEAIKFFH 285



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 73/216 (33%), Positives = 119/216 (55%)

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++LD   E    P V TY ILI   C    V +A+   ++M S+ C+PD+VTYN ++  +
Sbjct: 2   EVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNGM 61

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CKEG L+EA++ L+ +      P +IT+N ++  +   G    A  L  +M+  G SP  
Sbjct: 62  CKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMVRKGCSPSV 121

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T   LI   CR   +  A+D+L+++   G    + +Y  ++HG CK KK+D AIQ LE+
Sbjct: 122 VTFNILINFLCRKGLLGRAIDILEKMPTHGCTPNSLSYNPLLHGFCKEKKMDRAIQYLEI 181

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M+S    PD   ++T++  +  DG  + A +L  +L
Sbjct: 182 MVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQL 217



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/207 (32%), Positives = 107/207 (51%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L  FC   K+  A + ++IM  R   PD      ++  L +  +++ A ++L  +  
Sbjct: 160 NPLLHGFCKEKKMDRAIQYLEIMVSRGCYPDIVTYNTMLTALCKDGKVDAAVELLNQLSS 219

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  ITYN ++ GL K G+   A+ LL EM   G +PDVITY++++  +   GK ++
Sbjct: 220 KGCSPVLITYNTVIDGLSKVGKTDQAVELLHEMRGKGLKPDVITYSSLIAGLSREGKVEE 279

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI F+ D    G  P   TY  ++  +CK     RAI+ L  M  +GC P  V+Y  L+ 
Sbjct: 280 AIKFFHDVEGFGVKPNAFTYNSIMFGLCKAQQTDRAIDFLAYMISKGCKPTEVSYTILIE 339

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNS 327
               +G   +A+ ++N L SRG+   S
Sbjct: 340 GIANEGLAKEALELLNELCSRGVVKKS 366



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 34/113 (30%), Positives = 59/113 (52%)

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           M +  + +E    PD IT+  LI   C    V +A+ LL E+G RG K     Y ++++G
Sbjct: 1   MEVLDRQLEKECYPDVITYTILIEATCAESGVGQAMKLLDEMGSRGCKPDVVTYNVLVNG 60

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +CK  ++D AI+ L  M S   +P+    + I++ +   G   +A KL  +++
Sbjct: 61  MCKEGRLDEAIKFLNSMPSYGSQPNVITHNIILRSMCSTGRWMDAEKLLTEMV 113


>gi|255561943|ref|XP_002521980.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538784|gb|EEF40384.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 584

 Score =  272 bits (696), Expect = 3e-70,   Method: Compositional matrix adjust.
 Identities = 153/477 (32%), Positives = 247/477 (51%), Gaps = 36/477 (7%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+L   C  GK  ++   ++ M  +   PD   C  LI+G      I KA++V++I+   
Sbjct: 74  KLLNRSCRAGKYNESLYFLECMVDKGYTPDVILCTKLIKGFFNSRNIGKATRVMEILERY 133

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD   YN ++ G  K  Q+ +A  +LD M   G  PDV+TYN ++ +    GK   A
Sbjct: 134 GK-PDVFAYNALISGFIKANQLENANRVLDRMKSRGFLPDVVTYNIMIGSFCSRGKLDLA 192

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +  +++ L+  C P +ITYTILIE      GI  A+++LD+M  +G  PD +TYN+++  
Sbjct: 193 LEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLLDEMLSKGLEPDTLTYNAIIRG 252

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM-------N 354
            CK+   D A  ++ +L SRG +P+ ITYN LL +L SRG W   +K++  M       N
Sbjct: 253 MCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSRGKWSEGEKLISEMISIGCKPN 312

Query: 355 EASHS----------------------------PTVFTYNILINGLCKYGLVDRAINSFN 386
             +HS                            P  + Y+ LI G C+ G +D A     
Sbjct: 313 VVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCYDPLIAGFCREGRLDLATEFLE 372

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M+S  C PDIV YNT++  LC+ G  ++AL++   L+   C P + +YNTL   L   G
Sbjct: 373 YMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDEVGCPPNVSSYNTLFSALWSSG 432

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
              +A+ +  +++  GI PD+IT+ +LI   CR   V+EA++LL ++     +    +Y 
Sbjct: 433 DRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDEAIELLVDMQSGRYRPNVVSYN 492

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +++ GLCK  + + AI+VL  M     +P++T +  +++ +   G+  EA +L   L
Sbjct: 493 IILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIEGIGFSGLRAEAMELANSL 549



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 118/374 (31%), Positives = 202/374 (54%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ +FCSRGKL  A ++ + + + N  P       LI   I    I+ A K+L
Sbjct: 172 DVVTYNIMIGSFCSRGKLDLALEIFEELLKDNCEPTVITYTILIEATILDGGIDVAMKLL 231

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PDT+TYN ++ G+CK   +  A  LL  +S  GC+PD+ITYN +LRT+   
Sbjct: 232 DEMLSKGLEPDTLTYNAIIRGMCKEMMVDKAFELLRSLSSRGCKPDIITYNILLRTLLSR 291

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK+ +      + +  GC P ++T++ILI  +C+   +  A+ +L  M  +G  PD   Y
Sbjct: 292 GKWSEGEKLISEMISIGCKPNVVTHSILIGTLCRDGKVEEAVNLLRSMKEKGLKPDAYCY 351

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+   C++G+ D A   +  ++S G  P+ + YNT++  L   G  D   ++ + ++E
Sbjct: 352 DPLIAGFCREGRLDLATEFLEYMISDGCLPDIVNYNTIMAGLCRTGKADQALEVFEKLDE 411

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V +YN L + L   G   RA+    +++++   PD +TYN+++  LC++GM++E
Sbjct: 412 VGCPPNVSSYNTLFSALWSSGDRYRALEMILKLLNQGIDPDEITYNSLISCLCRDGMVDE 471

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A++LL  +      P +++YN ++ GL K      A+ +   M E G  P++ T+  LI 
Sbjct: 472 AIELLVDMQSGRYRPNVVSYNIILLGLCKVNRANDAIEVLAAMTEKGCQPNETTYILLIE 531

Query: 476 GFCRADQVEEAVDL 489
           G   +    EA++L
Sbjct: 532 GIGFSGLRAEAMEL 545


>gi|356574874|ref|XP_003555568.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 576

 Score =  271 bits (694), Expect = 5e-70,   Method: Compositional matrix adjust.
 Identities = 159/476 (33%), Positives = 247/476 (51%), Gaps = 35/476 (7%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K L   C  GK T+A   ++ M +R   PD   C  LI+GL    R EKA +V++I+   
Sbjct: 82  KALNRLCKTGKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQY 141

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD+  YN ++ G C+  +  +A  ++  M   G  PDV+TYN ++ ++   GK   A
Sbjct: 142 GD-PDSFAYNAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLA 200

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +      L   C P +ITYTILIE       I  A+ +LD+M   G  PD+ TYN +V  
Sbjct: 201 LKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRG 260

Query: 302 SCKQGKYDDAVLVINNL--------------------------------LSRGMEPNSIT 329
            CK+G  D A   ++NL                                + +G EPN +T
Sbjct: 261 MCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVT 320

Query: 330 YNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           Y+ L+ SL   G   +AVD +L +M E   +P  + Y+ LI+  CK G VD AI   + M
Sbjct: 321 YSVLISSLCRDGKAGEAVD-VLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDM 379

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           +S    PDIV YNT++G+LCK+G  +EAL +   L    C P   +YNT+   L   G  
Sbjct: 380 ISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGCPPNASSYNTMFGALWSSGDK 439

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +A+ +  +M+ NG+ PD IT+ +LI   CR   V+EA+ LL ++ +   +    +Y +V
Sbjct: 440 IRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEAIGLLVDMERTEWQPTVISYNIV 499

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + GLCK+ ++  AI+VL +M+ +  +P++T ++ +V+ V   G    A +L + L+
Sbjct: 500 LLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEGVGYAGWRSYAVELAKSLV 555



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/386 (31%), Positives = 189/386 (48%), Gaps = 37/386 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + C+RGKL  A K++D +   N  P       LI   I    I+ A ++L
Sbjct: 180 DVVTYNILIGSLCARGKLDLALKVMDQLLEDNCNPTVITYTILIEATIIHGSIDDAMRLL 239

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA--------------------------- 208
             M+  G  PD  TYN++V G+CKRG +  A                             
Sbjct: 240 DEMMSRGLQPDMYTYNVIVRGMCKRGLVDRAFEFVSNLNTTPSLNLYNLLLKGLLNEGRW 299

Query: 209 -----LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                L+ +M V GCEP+++TY+ ++ ++  +GK  +A+   +    KG  P    Y  L
Sbjct: 300 EAGERLMSDMIVKGCEPNIVTYSVLISSLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPL 359

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I   CK+  +  AI  +DDM   G  PDIV YN+++   CK+G+ D+A+ +   L   G 
Sbjct: 360 ISAFCKEGKVDLAIGFVDDMISAGWLPDIVNYNTIMGSLCKKGRADEALNIFKKLEEVGC 419

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS--PTVFTYNILINGLCKYGLVDRA 381
            PN+ +YNT+  +L S G  D +  +  I+   S+   P   TYN LI+ LC+ G+VD A
Sbjct: 420 PPNASSYNTMFGALWSSG--DKIRALTMILEMLSNGVDPDRITYNSLISSLCRDGMVDEA 477

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           I     M     QP +++YN VL  LCK   + +A+++L ++  + C P   TY  L++G
Sbjct: 478 IGLLVDMERTEWQPTVISYNIVLLGLCKAHRIVDAIEVLAVMVDNGCQPNETTYTLLVEG 537

Query: 442 LAKKGCMEKAMVLYGQMME-NGISPD 466
           +   G    A+ L   ++  N IS D
Sbjct: 538 VGYAGWRSYAVELAKSLVSMNAISQD 563



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 108/330 (32%), Positives = 183/330 (55%), Gaps = 4/330 (1%)

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK+ +A+ F +  +++G  P +I  T LI+ +       +A+ V++ +   G  PD   Y
Sbjct: 91  GKYTEALYFLEQMVKRGYKPDVILCTKLIKGLFTSKRTEKAVRVMEILEQYG-DPDSFAY 149

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++  C+  ++D A  VI  +  RG  P+ +TYN L+ SL +RG  D   K++D + E
Sbjct: 150 NAVISGFCRSDRFDAANRVILRMKYRGFSPDVVTYNILIGSLCARGKLDLALKVMDQLLE 209

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            + +PTV TY ILI     +G +D A+   ++M+S+  QPD+ TYN ++  +CK G+++ 
Sbjct: 210 DNCNPTVITYTILIEATIIHGSIDDAMRLLDEMMSRGLQPDMYTYNVIVRGMCKRGLVDR 269

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A + +  LN    +P L  YN L+ GL  +G  E    L   M+  G  P+ +T+  LI 
Sbjct: 270 AFEFVSNLN---TTPSLNLYNLLLKGLLNEGRWEAGERLMSDMIVKGCEPNIVTYSVLIS 326

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             CR  +  EAVD+L+ + ++G       Y  +I   CK  KVD+AI  ++ MIS+ + P
Sbjct: 327 SLCRDGKAGEAVDVLRVMKEKGLNPDAYCYDPLISAFCKEGKVDLAIGFVDDMISAGWLP 386

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   ++TI+  +   G  +EA  +++KL E
Sbjct: 387 DIVNYNTIMGSLCKKGRADEALNIFKKLEE 416


>gi|302809105|ref|XP_002986246.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
 gi|300146105|gb|EFJ12777.1| hypothetical protein SELMODRAFT_123660 [Selaginella moellendorffii]
          Length = 725

 Score =  271 bits (694), Expect = 6e-70,   Method: Compositional matrix adjust.
 Identities = 143/445 (32%), Positives = 255/445 (57%), Gaps = 2/445 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C   ++ +A +++D M +R   P+      L+ G  R+  ++ A ++++ M   G
Sbjct: 120 VINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERG 179

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNGKFKQA 241
             P+ ITYN ++ GLC   ++ SA+ L  EM  SG C PDV TY+TI+ ++  +GK   A
Sbjct: 180 YRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDA 239

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
               +  + KGC P ++TY+ L+  +CK   +  A  +L  M   GCSP+IVTYN++++ 
Sbjct: 240 CRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDG 299

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK G+ D+A  ++  ++  G +PN +TY  LL +    G  +    ++++M E  + P 
Sbjct: 300 HCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPN 359

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           +FTYN L++  CK   V+RA    + M+ K C P++V+YNTV+  LCK   ++E + LL 
Sbjct: 360 LFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLE 419

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +  ++C P ++T+NT+ID + K   ++ A  L+  + E+G +P+ +T+ +L+ G C++ 
Sbjct: 420 QMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSR 479

Query: 482 QVEEAVDLLKEIG-KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           + ++A  LL+E+  K+G       Y  VI GLCKSK+VD A ++   M+S    PDD  +
Sbjct: 480 RFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTY 539

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           S ++  +      +EA  + + +++
Sbjct: 540 SIVISSLCKWRFMDEANNVLELMLK 564



 Score =  261 bits (666), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 143/447 (31%), Positives = 252/447 (56%), Gaps = 1/447 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + I+ +    GK+ DA +L++ M  +   P+     +L+ GL +  ++++A+ +L
Sbjct: 219 DVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALL 278

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M  SG  P+ +TYN ++ G CK G+I  A  LL+EM   GC+P+V+TY  +L      
Sbjct: 279 QRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKC 338

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK + AIG  +  + KG  P L TY  L++  CK+  + RA ++L  M  +GC P++V+Y
Sbjct: 339 GKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSY 398

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++   CK  K  + VL++  +LS    P+ +T+NT++ ++      D   ++ +++ E
Sbjct: 399 NTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQE 458

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLN 414
           +  +P + TYN L++GLCK    D+A     +M  K  C PDI+TYNTV+  LCK   ++
Sbjct: 459 SGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVD 518

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A +L   +     +P  +TY+ +I  L K   M++A  +   M++NG  P  IT+ TLI
Sbjct: 519 RAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLI 578

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            GFC+   +++A+++L+ +  +G+      + + I  L K  ++  A ++LE M+ +   
Sbjct: 579 DGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLV 638

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           PD   ++T++K   D   TE+A  L++
Sbjct: 639 PDTVTYNTLLKGFCDASRTEDAVDLFE 665



 Score =  260 bits (665), Expect = 1e-66,   Method: Compositional matrix adjust.
 Identities = 144/449 (32%), Positives = 255/449 (56%), Gaps = 4/449 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N I+   CS  KL  A +L   M      P D      ++  L++  +++ A ++++ 
Sbjct: 186 TYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEA 245

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV  G  P+ +TY+ ++ GLCK G++  A ALL  M+ SGC P+++TYNTI+      G+
Sbjct: 246 MVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGR 305

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR-AIEVLDDMAIEGCSPDIVTYN 296
             +A    ++ +  GC P ++TYT+L++  CK CG A  AI +++ M  +G  P++ TYN
Sbjct: 306 IDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCK-CGKAEDAIGLVEVMVEKGYVPNLFTYN 364

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL++  CK+ + + A  ++++++ +G  PN ++YNT++  L           +L+ M   
Sbjct: 365 SLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSN 424

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           +  P + T+N +I+ +CK   VD A   FN +    C P++VTYN+++  LCK    ++A
Sbjct: 425 NCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQA 484

Query: 417 LQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
             LL  +     CSP +ITYNT+IDGL K   +++A  L+ QM+ +G++PDD+T+  +I 
Sbjct: 485 EYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVIS 544

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             C+   ++EA ++L+ + K G       Y  +I G CK+  +D A+++L+L++S    P
Sbjct: 545 SLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYP 604

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           D   FS  +  ++  G   +A +L + ++
Sbjct: 605 DVVTFSIFIDWLSKRGRLRQAGELLETML 633



 Score =  258 bits (660), Expect = 5e-66,   Method: Compositional matrix adjust.
 Identities = 152/446 (34%), Positives = 238/446 (53%), Gaps = 39/446 (8%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           +++RGL   D  + +  VL    MS   P D++TYN M+ GL K  ++  AI LL+EM  
Sbjct: 15  SILRGLC--DAGQCSDAVLHFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVD 72

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
           +G  P+V +YNT+L       + + A+   +  + +GCPP +++YT +I  +CK   +  
Sbjct: 73  NGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVMRGCPPDVVSYTTVINGLCKLDQVDE 132

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A  V+D M   GC P+++TY +LV+  C+ G  D AV ++  +  RG  PN+ITYN ++H
Sbjct: 133 ACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMH 192

Query: 336 SLGSRGCWDAVDKILDIMNEA-SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            L S    D+  ++   M E+ S  P VFTY+ +++ L K G VD A      MVSK C 
Sbjct: 193 GLCSGRKLDSALQLFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEAMVSKGCS 252

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P++VTY+++L  LCK G L+EA  LL  +  S CSP ++TYNT+IDG  K G +++A  L
Sbjct: 253 PNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCSPNIVTYNTIIDGHCKLGRIDEAYHL 312

Query: 455 YGQMMENGISPDDITHRTLIWGFCRA---------------------------------- 480
             +M++ G  P+ +T+  L+  FC+                                   
Sbjct: 313 LEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCK 372

Query: 481 -DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
            D+VE A  LL  + ++G      +Y  VI GLCK+ KV   + +LE M+S+   PD   
Sbjct: 373 KDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVT 432

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIE 565
           F+TI+  +      + AY+L+  + E
Sbjct: 433 FNTIIDAMCKTYRVDIAYELFNLIQE 458



 Score =  255 bits (652), Expect = 4e-65,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 240/449 (53%), Gaps = 1/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++       +L DA +L++ M      P+      ++ G  + +R+E A  +L
Sbjct: 43  DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLL 102

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MVM G  PD ++Y  ++ GLCK  Q+  A  ++D+M   GC+P+VITY T++      
Sbjct: 103 EQMVMRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRV 162

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVT 294
           G    A+   +    +G  P  ITY  ++  +C    +  A+++  +M   G C PD+ T
Sbjct: 163 GDLDGAVELVRKMTERGYRPNAITYNNIMHGLCSGRKLDSALQLFKEMEESGSCPPDVFT 222

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+++V+   K GK DDA  ++  ++S+G  PN +TY++LLH L   G  D    +L  M 
Sbjct: 223 YSTIVDSLVKSGKVDDACRLVEAMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMT 282

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            +  SP + TYN +I+G CK G +D A +   +MV   CQP++VTY  +L A CK G   
Sbjct: 283 RSGCSPNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAE 342

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A+ L+ ++      P L TYN+L+D   KK  +E+A  L   M++ G  P+ +++ T+I
Sbjct: 343 DAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVI 402

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+A +V E V LL+++           +  +I  +CK+ +VD+A ++  L+  S   
Sbjct: 403 AGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCT 462

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           P+   ++++V  +      ++A  L +++
Sbjct: 463 PNLVTYNSLVHGLCKSRRFDQAEYLLREM 491



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 122/390 (31%), Positives = 208/390 (53%), Gaps = 7/390 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +L  FC  GK  DA  L+++M  +  +P+     +L+    + D +E+A ++L  M
Sbjct: 327 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 386

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G VP+ ++YN ++ GLCK  ++   + LL++M  + C PD++T+NTI+  M    + 
Sbjct: 387 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 446

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA-IEGCSPDIVTYNS 297
             A   +      GC P L+TY  L+  +CK     +A  +L +M   +GCSPDI+TYN+
Sbjct: 447 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 506

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  CK  + D A  +   +LS G+ P+ +TY+ ++ SL      D  + +L++M +  
Sbjct: 507 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 566

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TY  LI+G CK G +D+A+     ++SK   PD+VT++  +  L K G L +A 
Sbjct: 567 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 626

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL  +  +   P  +TYNTL+ G       E A+ L+  M + G  PD+ T+ TL+   
Sbjct: 627 ELLETMLRAGLVPDTVTYNTLLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 686

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
                 +   DLL E+ K    M ++ ++L
Sbjct: 687 VDKKSYK---DLLAEVSK---SMVDTGFKL 710



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 46/157 (29%), Positives = 87/157 (55%), Gaps = 2/157 (1%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  +  D+ T + ++ + C    + +A+ ++++M +    P       LI G  +   
Sbjct: 529 SDG--LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 586

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           ++KA ++LQ+++  G  PD +T+++ +  L KRG++R A  LL+ M  +G  PD +TYNT
Sbjct: 587 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 646

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           +L+   D  + + A+  ++   + GC P   TYT L+
Sbjct: 647 LLKGFCDASRTEDAVDLFEVMRQCGCEPDNATYTTLV 683



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 28/107 (26%), Positives = 55/107 (51%), Gaps = 1/107 (0%)

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M   G+      H++++ G C A Q  +AV   +E+ K      +  Y  +I+GL KS +
Sbjct: 1   MNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKTCPP-DSVTYNTMINGLSKSDR 59

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +D AI++LE M+ + + P+   ++T++         E A  L ++++
Sbjct: 60  LDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMV 106


>gi|302762244|ref|XP_002964544.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
 gi|300168273|gb|EFJ34877.1| hypothetical protein SELMODRAFT_82221 [Selaginella moellendorffii]
          Length = 528

 Score =  268 bits (685), Expect = 5e-69,   Method: Compositional matrix adjust.
 Identities = 141/453 (31%), Positives = 242/453 (53%), Gaps = 5/453 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T  K++       +L DA +++  M     +PD      +++ L   DR++ A +++
Sbjct: 38  DFLTYTKLVHGLSKARRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELV 97

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G   + ITY+ +V GLCK  ++  A+AL++ M+  GC P V+TYN+I+      
Sbjct: 98  EEMLHRGMAANAITYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRA 157

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A GF +  + +GC P +ITYT LI   CK   + R +E+L ++   G +PDIVTY
Sbjct: 158 RRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTY 217

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +++++  CK G+  DAV +   +      P +ITYN+L+      G  D   ++L  M +
Sbjct: 218 STVIDGLCKAGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVD 274

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P V TY  L++  CK G +D A   F QMV+    PD+VT+ +++  LC EG + +
Sbjct: 275 DKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMED 334

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL+LL  +    C P + TYN ++DG  K   + KA  L       G  P+ +T+  L+ 
Sbjct: 335 ALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVA 394

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSA--YRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           G CRA + ++A+  L ++   G     S   Y +++  LC+  + D A+Q  E MI   Y
Sbjct: 395 GCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGY 454

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            P    F+T+V  +      ++A++L +++I++
Sbjct: 455 VPAAATFATVVFALCKAHQPQQAHELLEEMIKY 487



 Score =  248 bits (632), Expect = 8e-63,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 240/460 (52%), Gaps = 10/460 (2%)

Query: 120 NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           +N ++   C  G+L  A  +   M   +  PDF     L+ GL +  R+  A +VLQ MV
Sbjct: 8   HNVVIGGLCRAGRLRHALGVYRQMNDAHP-PDFLTYTKLVHGLSKARRLRDAVQVLQEMV 66

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            +  VPD  T  ++V  LC   ++  A  L++EM   G   + ITY+ ++  +    +  
Sbjct: 67  SARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLD 126

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A+   +    +GC P ++TY  +I   C+   +  A   ++ M  EGC PDI+TY +L+
Sbjct: 127 EAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALI 186

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASH 358
              CK       + ++  +  RG  P+ +TY+T++  L   G   DAVD    I  E S 
Sbjct: 187 GGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD----IFEEMSC 242

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +PT  TYN LI G C+ G +D AI    +MV   C PD+VTY T++ A CK G L++A +
Sbjct: 243 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYE 302

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +  +  SP ++T+ +L+DGL  +G ME A+ L  ++   G  P   T+  ++ G+C
Sbjct: 303 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 362

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A+QV +A +L+ +   RG       Y +++ G C++ + D A+Q L+  ++S   P  T
Sbjct: 363 KANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD-QLNSEGGPCPT 421

Query: 539 ---VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
              +++ I+  +  DG T++A + ++++I+        T 
Sbjct: 422 SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 461



 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 117/405 (28%), Positives = 210/405 (51%), Gaps = 5/405 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C   +L +A  L++ MA R   P      ++I G  R  R+++A   ++ M
Sbjct: 111 TYSALVDGLCKCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQM 170

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD ITY  ++GG CK   +   + LL E++  G  PD++TY+T++  +   G+ 
Sbjct: 171 VAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRL 230

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A+  +++     C P  ITY  LI   C+   +  AI +L  M  + C+PD+VTY +L
Sbjct: 231 RDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTL 287

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G+ DDA  +   +++  + P+ +T+ +L+  L   G  +   ++L+ +     
Sbjct: 288 MSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGC 347

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            PT++TYN +++G CK   V +A        S+   P+ VTYN ++   C+ G  ++ALQ
Sbjct: 348 PPTIYTYNCVVDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQ 407

Query: 419 LLHLLN--GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            L  LN  G  C   +  Y  ++D L + G  + A+  Y +M++ G  P   T  T+++ 
Sbjct: 408 YLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFA 467

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
            C+A Q ++A +LL+E+ K G+         V+   C++  +  A
Sbjct: 468 LCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 512



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 99/342 (28%), Positives = 170/342 (49%), Gaps = 5/342 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  FC    +    +L+  + RR   PD      +I GL +  R+  A  + + M
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +   P  ITYN ++GG C+ G +  AI LL +M    C PDV+TY T++      G+ 
Sbjct: 241 SCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRL 297

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   ++  +     P ++T+T L++ +C +  +  A+E+L+++   GC P I TYN +
Sbjct: 298 DDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCV 357

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN-EAS 357
           V+  CK  +   A  ++ +  SRG  PN++TYN L+      G  D   + LD +N E  
Sbjct: 358 VDGYCKANQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGG 417

Query: 358 HSPT-VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             PT V  Y I+++ LC+ G  D A+  + +M+ +   P   T+ TV+ ALCK     +A
Sbjct: 418 PCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQA 477

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
            +LL  +     +P   T + ++    + G ++KA  L  ++
Sbjct: 478 HELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 519



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 169/349 (48%), Gaps = 39/349 (11%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P  + +N ++  +   G+ + A+G ++ Q+    PP  +TYT L+  + K   +  A++V
Sbjct: 3   PGTLLHNVVIGGLCRAGRLRHALGVYR-QMNDAHPPDFLTYTKLVHGLSKARRLRDAVQV 61

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L +M      PD  T   +V   C   + DDA  ++  +L RGM  N+IT          
Sbjct: 62  LQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAIT---------- 111

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
                                    Y+ L++GLCK   +D A+     M  + C P +VT
Sbjct: 112 -------------------------YSALVDGLCKCERLDEAVALVETMAERGCAPTVVT 146

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           YN+++   C+   ++EA   +  +    C P +ITY  LI G  K   + + + L G++ 
Sbjct: 147 YNSIITGFCRARRVDEAHGFMEQMVAEGCHPDIITYTALIGGFCKSRDVGRGLELLGEVT 206

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
             G +PD +T+ T+I G C+A ++ +AVD+ +E+      +    Y  +I G C++  +D
Sbjct: 207 RRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI---TYNSLIGGYCRAGDMD 263

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            AI++L  M+  +  PD   ++T++      G  ++AY+L+Q+++  K+
Sbjct: 264 EAIRLLGKMVDDKCAPDVVTYTTLMSAFCKMGRLDDAYELFQQMVANKL 312



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 113/240 (47%), Gaps = 36/240 (15%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P    +N++I GLC+ G +  A+  + QM   +  PD +TY  ++  L K   L +A+Q
Sbjct: 2   NPGTLLHNVVIGGLCRAGRLRHALGVYRQMNDAH-PPDFLTYTKLVHGLSKARRLRDAVQ 60

Query: 419 LLHLLNGSSCSP------------CL-----------------------ITYNTLIDGLA 443
           +L  +  +   P            CL                       ITY+ L+DGL 
Sbjct: 61  VLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLC 120

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K   +++A+ L   M E G +P  +T+ ++I GFCRA +V+EA   ++++   G      
Sbjct: 121 KCERLDEAVALVETMAERGCAPTVVTYNSIITGFCRARRVDEAHGFMEQMVAEGCHPDII 180

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I G CKS+ V   +++L  +    + PD   +ST++  +   G   +A  +++++
Sbjct: 181 TYTALIGGFCKSRDVGRGLELLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEM 240



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/205 (20%), Positives = 84/205 (40%), Gaps = 37/205 (18%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G++ DA +L++ + RR   P  +    ++ G  + +++ KA +++
Sbjct: 315 DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKANQVRKAEELV 374

Query: 176 QIMVMSGGVPDTITYNMMVGG-------------------------------------LC 198
                 G VP+T+TYN++V G                                     LC
Sbjct: 375 ADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALC 434

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           + G+   A+   +EM   G  P   T+ T++  +    + +QA    ++ ++ G  P   
Sbjct: 435 RDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPG 494

Query: 259 TYTILIEQVCKQCGIARAIEVLDDM 283
           T   ++   C+   I +A E+  ++
Sbjct: 495 TCDAVVSAYCRAGMIQKADELASEL 519


>gi|449449675|ref|XP_004142590.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Cucumis sativus]
          Length = 581

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 160/535 (29%), Positives = 265/535 (49%), Gaps = 48/535 (8%)

Query: 69  RVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFC 128
           R + +    +S+++H       LR +T + +   P  P+ D     N +    K+L   C
Sbjct: 26  RSDSIPACRFSNKTH-------LRNVTSSAEFRQPHFPNLD-----NRDAHLMKLLNRSC 73

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
             GK  ++   ++ +  +   PD   C  LI+G      ++KA +V++I+   G  PD  
Sbjct: 74  RAGKHNESLYFLESVVSKGFKPDVVLCTKLIKGFFNSRNLKKAMRVMEILETYGD-PDVY 132

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           +YN M+ G  K  QI SA  + D M   G  PDV+TYN ++ ++   GK + A     + 
Sbjct: 133 SYNAMISGFSKANQIDSANQVFDRMRSRGFSPDVVTYNIMIGSLCSRGKLELAFEVMDEL 192

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           L+ GC P +ITYTILIE    +  I  A+E+ D++   G  PD+ TYN+++   CK+G  
Sbjct: 193 LKDGCKPSVITYTILIEATILEGRINEALELFDELVSRGLRPDLYTYNAIIRGICKEGME 252

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK-------------------- 348
           D A+  + +L +RG  P+ ++YN LL S  ++  W+  ++                    
Sbjct: 253 DRALDFVRHLSARGCNPDVVSYNILLRSFLNKSRWEDGERLMKDMVLSGCEPNVVTHSIL 312

Query: 349 ---------------ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
                          +L++M E   +P  ++Y+ LI+  CK G +D AI    +MVS  C
Sbjct: 313 ISSFCREGRVREAVNVLEVMKEKGLTPDSYSYDPLISAFCKEGRLDLAIEYLEKMVSDGC 372

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PDIV YNT+L  LCK G  + AL +   L+   C P +  YNT+   L   G   KA+ 
Sbjct: 373 LPDIVNYNTILATLCKFGCADLALDVFEKLDEVGCPPTVRAYNTMFSALWSCGNKIKALE 432

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +  +M+  GI PD+IT+ +LI   CR   V+EA+ LL ++     +    ++ +V+ G+C
Sbjct: 433 MISEMIRKGIDPDEITYNSLISCLCRDGLVDEAIGLLVDMEATRFQPTVISFNIVLLGMC 492

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           K+ +V   I++L  M+     P++T +  +++ +A  G   EA +L   L    V
Sbjct: 493 KAHRVFEGIELLITMVEKGCLPNETSYVLLIEGIAYAGWRAEAMELANSLYRLGV 547



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/412 (29%), Positives = 221/412 (53%), Gaps = 11/412 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + CSRGKL  A +++D + +    P       LI   I   RI +A ++ 
Sbjct: 165 DVVTYNIMIGSLCSRGKLELAFEVMDELLKDGCKPSVITYTILIEATILEGRINEALELF 224

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +V  G  PD  TYN ++ G+CK G    A+  +  +S  GC PDV++YN +LR+  + 
Sbjct: 225 DELVSRGLRPDLYTYNAIIRGICKEGMEDRALDFVRHLSARGCNPDVVSYNILLRSFLNK 284

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +++      KD +  GC P ++T++ILI   C++  +  A+ VL+ M  +G +PD  +Y
Sbjct: 285 SRWEDGERLMKDMVLSGCEPNVVTHSILISSFCREGRVREAVNVLEVMKEKGLTPDSYSY 344

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L++  CK+G+ D A+  +  ++S G  P+ + YNT+L +L   GC D    + + ++E
Sbjct: 345 DPLISAFCKEGRLDLAIEYLEKMVSDGCLPDIVNYNTILATLCKFGCADLALDVFEKLDE 404

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               PTV  YN + + L   G   +A+   ++M+ K   PD +TYN+++  LC++G+++E
Sbjct: 405 VGCPPTVRAYNTMFSALWSCGNKIKALEMISEMIRKGIDPDEITYNSLISCLCRDGLVDE 464

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ LL  +  +   P +I++N ++ G+ K   + + + L   M+E G  P++ ++  LI 
Sbjct: 465 AIGLLVDMEATRFQPTVISFNIVLLGMCKAHRVFEGIELLITMVEKGCLPNETSYVLLIE 524

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           G   A    EA++L            NS YRL +     SK+++    +L++
Sbjct: 525 GIAYAGWRAEAMEL-----------ANSLYRLGVISGDSSKRLNKTFPMLDV 565


>gi|449476143|ref|XP_004154653.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 155/488 (31%), Positives = 258/488 (52%), Gaps = 4/488 (0%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDPSLPSSD--GPFVENDEKTNNKILQNFCSRGKLTDASK 138
           E +V  +N  +  L   +K  +     SD  G  V  D  T N ++  +C  G + +A +
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L++  + R   P       ++ GL +I + ++A  VL  M+  G  P+  TYN ++  +C
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           +R  I  A  + DEMS  G  PD++++++++  +  NG   QA+  +++  R G  P  +
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
            YTILI+  C+   ++ A+++ D+M   GC  D+VTYN+ +N  CK+  + DA ++ N +
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           + RGM P+  T+ TL+      G  D    + + M   +  P   TYN LI+G CK G +
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
            RA   ++ M+ K+  PD ++Y TVL   C  G+L EAL L   +      P L+T NTL
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I G  + G M KA     +M+ NGI PD  ++ TLI G+ +   +E+A  L+ E+ KRG 
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK-KVADDGMTEEAY 557
           +     Y L+++G C   K+  A QVL  MI     PD   +S+++   V+ D M +EA+
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNM-KEAF 732

Query: 558 KLWQKLIE 565
           +   ++++
Sbjct: 733 RFHDEMLQ 740



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 197/382 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +  T N +L   C R  + +A ++ D M+RR  +PD     +LI  L R   + +A    
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  SG VPD + Y +++ G C+ G +  A+ + DEM   GC  DV+TYNT L  +   
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
             F  A   + + + +G  P   T+T LI   CK   + +A+ + + M      PD VTY
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK G+   A  + ++++ + + P+ I+Y T+L+   S G       + D M E
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + T N LI G C+ G + +A    ++M+S    PD  +YNT++    KE  L +
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L++ +        +ITYN +++G   +G M++A  +  +M+E GI+PD  T+ +LI 
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G    D ++EA     E+ +RG
Sbjct: 721 GHVSQDNMKEAFRFHDEMLQRG 742



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 222/442 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +    KL + S+   I+ R+      + C  L+ GL+R   ++ A ++   +V  G
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T N+MV  LCK  +  + +  L +M   G   D++TYNT++      G  ++A 
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   +G  P L+TY  ++  +CK     RA +VL +M   G +P+  TYN+L+   
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C++    +A  + + +  RG+ P+ +++++L+  L   G           M  +   P  
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y ILI+G C+ G +  A+   ++M+++ C  D+VTYNT L  LCK+ M  +A  L + 
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   T+ TLI G  K G M+KA+ L+  M+   + PD +T+ TLI GFC+A +
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +  A +L  ++ ++     + +Y  V++G C S  +  A+ + + M+    +P+    +T
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           ++K     G   +AY+   K+I
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMI 634



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 208/408 (50%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+R  ++  ++ + S+  QI+   G        N ++GGL + G +  A  +  E+   G
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            E +V T N ++  +  + KF+  + F  D   KG    ++TY  LI   C++  +  A 
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++L+  +  G  P ++TYN+++   CK GKYD A  V+  +L  G+ PN+ TYNTLL  +
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             R       +I D M+     P + +++ LI  L + G + +A+  F +M      PD 
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V Y  ++   C+ G L++AL++   +    C   ++TYNT ++GL KK     A +L+ +
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+E G+ PD  T  TLI G+C+   +++A++L + + +   K     Y  +I G CK+ +
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +  A ++ + MI     PD   + T++      G+  EA  L  +++E
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 209/460 (45%), Gaps = 23/460 (5%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDF-HFCINL---IRGLIRIDRIEKASKVLQIMVMSG 182
           F  RG L    K I +++     P+F H   +L   +  L+R  R+ +A   +  MV   
Sbjct: 108 FRCRGDLHLGLKFIGLVSY--HFPNFKHSSXSLSAMVHFLVRGRRLSEAQACILRMVRKS 165

Query: 183 GVPDT-----------------ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           GV                    + Y+++V    +  ++R        +   G    +   
Sbjct: 166 GVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINAC 225

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N +L  +   G    A   + + +R G    + T  I++  +CK       +  L DM  
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +G   DIVTYN+L+N  C++G  ++A  ++N+  SRGMEP  +TYN +L+ L   G +D 
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              +L  M +   +P   TYN L+  +C+   +  A   F++M  +   PD+V++++++G
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            L + G L +AL     +  S   P  + Y  LIDG  + G +  A+ +  +M+  G   
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +T+ T + G C+     +A  L  E+ +RG       +  +I G CK   +D A+ + 
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           E M+ +  KPD   ++T++      G    A +LW  +I 
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 138/281 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N  L   C +    DA  L + M  R  +PDF+    LIRG  +   ++KA  + 
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV +   PD +TYN ++ G CK G++  A  L D+M      PD I+Y T+L     +
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+      L KG  P L+T   LI+  C+   + +A E L  M   G  PD  +Y
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++   K+   + A ++IN +  RG++ N ITYN +L+   + G     +++L  M E
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +P   TY+ LING      +  A    ++M+ +   PD
Sbjct: 706 IGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746


>gi|449442579|ref|XP_004139059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Cucumis sativus]
          Length = 749

 Score =  268 bits (684), Expect = 7e-69,   Method: Compositional matrix adjust.
 Identities = 155/488 (31%), Positives = 258/488 (52%), Gaps = 4/488 (0%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDPSLPSSD--GPFVENDEKTNNKILQNFCSRGKLTDASK 138
           E +V  +N  +  L   +K  +     SD  G  V  D  T N ++  +C  G + +A +
Sbjct: 254 ELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAFQ 313

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L++  + R   P       ++ GL +I + ++A  VL  M+  G  P+  TYN ++  +C
Sbjct: 314 LLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEIC 373

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           +R  I  A  + DEMS  G  PD++++++++  +  NG   QA+  +++  R G  P  +
Sbjct: 374 RRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDNV 433

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
            YTILI+  C+   ++ A+++ D+M   GC  D+VTYN+ +N  CK+  + DA ++ N +
Sbjct: 434 IYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNEM 493

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           + RGM P+  T+ TL+      G  D    + + M   +  P   TYN LI+G CK G +
Sbjct: 494 VERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGEM 553

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
            RA   ++ M+ K+  PD ++Y TVL   C  G+L EAL L   +      P L+T NTL
Sbjct: 554 GRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNTL 613

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I G  + G M KA     +M+ NGI PD  ++ TLI G+ +   +E+A  L+ E+ KRG 
Sbjct: 614 IKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEKAFILINEMEKRGL 673

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK-KVADDGMTEEAY 557
           +     Y L+++G C   K+  A QVL  MI     PD   +S+++   V+ D M +EA+
Sbjct: 674 QFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLINGHVSQDNM-KEAF 732

Query: 558 KLWQKLIE 565
           +   ++++
Sbjct: 733 RFHDEMLQ 740



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 197/382 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +  T N +L   C R  + +A ++ D M+RR  +PD     +LI  L R   + +A    
Sbjct: 361 NAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHF 420

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  SG VPD + Y +++ G C+ G +  A+ + DEM   GC  DV+TYNT L  +   
Sbjct: 421 REMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKK 480

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
             F  A   + + + +G  P   T+T LI   CK   + +A+ + + M      PD VTY
Sbjct: 481 KMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTY 540

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK G+   A  + ++++ + + P+ I+Y T+L+   S G       + D M E
Sbjct: 541 NTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + T N LI G C+ G + +A    ++M+S    PD  +YNT++    KE  L +
Sbjct: 601 KGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSYNTLIDGYLKEANLEK 660

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L++ +        +ITYN +++G   +G M++A  +  +M+E GI+PD  T+ +LI 
Sbjct: 661 AFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIEIGINPDGATYSSLIN 720

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G    D ++EA     E+ +RG
Sbjct: 721 GHVSQDNMKEAFRFHDEMLQRG 742



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 222/442 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +    KL + S+   I+ R+      + C  L+ GL+R   ++ A ++   +V  G
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T N+MV  LCK  +  + +  L +M   G   D++TYNT++      G  ++A 
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   +G  P L+TY  ++  +CK     RA +VL +M   G +P+  TYN+L+   
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C++    +A  + + +  RG+ P+ +++++L+  L   G           M  +   P  
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y ILI+G C+ G +  A+   ++M+++ C  D+VTYNT L  LCK+ M  +A  L + 
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   T+ TLI G  K G M+KA+ L+  M+   + PD +T+ TLI GFC+A +
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +  A +L  ++ ++     + +Y  V++G C S  +  A+ + + M+    +P+    +T
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLEKGIRPNLVTCNT 612

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           ++K     G   +AY+   K+I
Sbjct: 613 LIKGYCRSGDMPKAYEYLSKMI 634



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/408 (28%), Positives = 208/408 (50%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+R  ++  ++ + S+  QI+   G        N ++GGL + G +  A  +  E+   G
Sbjct: 193 LVRTYVQAKKLREGSEAFQILRRKGVSVSINACNKLLGGLVRTGWVDLAWEIYGEVVRGG 252

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            E +V T N ++  +  + KF+  + F  D   KG    ++TY  LI   C++  +  A 
Sbjct: 253 IELNVYTLNIMVNALCKDRKFENVMFFLSDMEGKGVFADIVTYNTLINAYCREGLVEEAF 312

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++L+  +  G  P ++TYN+++   CK GKYD A  V+  +L  G+ PN+ TYNTLL  +
Sbjct: 313 QLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDRAKDVLIEMLQLGLTPNAATYNTLLVEI 372

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             R       +I D M+     P + +++ LI  L + G + +A+  F +M      PD 
Sbjct: 373 CRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIGVLARNGHLYQALMHFREMERSGIVPDN 432

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V Y  ++   C+ G L++AL++   +    C   ++TYNT ++GL KK     A +L+ +
Sbjct: 433 VIYTILIDGFCRNGALSDALKMRDEMLARGCFMDVVTYNTFLNGLCKKKMFADADMLFNE 492

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+E G+ PD  T  TLI G+C+   +++A++L + + +   K     Y  +I G CK+ +
Sbjct: 493 MVERGMVPDFYTFTTLIRGYCKDGNMDKALNLFEAMVRTNLKPDKVTYNTLIDGFCKAGE 552

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +  A ++ + MI     PD   + T++      G+  EA  L  +++E
Sbjct: 553 MGRAKELWDDMIRKDIIPDHISYGTVLNGFCSSGLLPEALNLCDQMLE 600



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/460 (25%), Positives = 210/460 (45%), Gaps = 23/460 (5%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDF-HFCINL---IRGLIRIDRIEKASKVLQIMVMSG 182
           F  RG L    K I +++     P+F H  ++L   +  L+R  R+ +A   +  MV   
Sbjct: 108 FRCRGDLHLGLKFIGLVSY--HFPNFKHSSLSLSAMVHFLVRGRRLSEAQACILRMVRKS 165

Query: 183 GVPDT-----------------ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           GV                    + Y+++V    +  ++R        +   G    +   
Sbjct: 166 GVSRVKVVESLISTCFYFGSVGLIYDLLVRTYVQAKKLREGSEAFQILRRKGVSVSINAC 225

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N +L  +   G    A   + + +R G    + T  I++  +CK       +  L DM  
Sbjct: 226 NKLLGGLVRTGWVDLAWEIYGEVVRGGIELNVYTLNIMVNALCKDRKFENVMFFLSDMEG 285

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +G   DIVTYN+L+N  C++G  ++A  ++N+  SRGMEP  +TYN +L+ L   G +D 
Sbjct: 286 KGVFADIVTYNTLINAYCREGLVEEAFQLLNSFSSRGMEPGLLTYNAILYGLCKIGKYDR 345

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              +L  M +   +P   TYN L+  +C+   +  A   F++M  +   PD+V++++++G
Sbjct: 346 AKDVLIEMLQLGLTPNAATYNTLLVEICRRDNILEAQEIFDEMSRRGVLPDLVSFSSLIG 405

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            L + G L +AL     +  S   P  + Y  LIDG  + G +  A+ +  +M+  G   
Sbjct: 406 VLARNGHLYQALMHFREMERSGIVPDNVIYTILIDGFCRNGALSDALKMRDEMLARGCFM 465

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +T+ T + G C+     +A  L  E+ +RG       +  +I G CK   +D A+ + 
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           E M+ +  KPD   ++T++      G    A +LW  +I 
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIR 565



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 88/281 (31%), Positives = 138/281 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N  L   C +    DA  L + M  R  +PDF+    LIRG  +   ++KA  + 
Sbjct: 466 DVVTYNTFLNGLCKKKMFADADMLFNEMVERGMVPDFYTFTTLIRGYCKDGNMDKALNLF 525

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV +   PD +TYN ++ G CK G++  A  L D+M      PD I+Y T+L     +
Sbjct: 526 EAMVRTNLKPDKVTYNTLIDGFCKAGEMGRAKELWDDMIRKDIIPDHISYGTVLNGFCSS 585

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+      L KG  P L+T   LI+  C+   + +A E L  M   G  PD  +Y
Sbjct: 586 GLLPEALNLCDQMLEKGIRPNLVTCNTLIKGYCRSGDMPKAYEYLSKMISNGIIPDSFSY 645

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++   K+   + A ++IN +  RG++ N ITYN +L+   + G     +++L  M E
Sbjct: 646 NTLIDGYLKEANLEKAFILINEMEKRGLQFNIITYNLILNGFCAEGKMQEAEQVLRKMIE 705

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +P   TY+ LING      +  A    ++M+ +   PD
Sbjct: 706 IGINPDGATYSSLINGHVSQDNMKEAFRFHDEMLQRGLVPD 746


>gi|356505993|ref|XP_003521773.1| PREDICTED: pentatricopeptide repeat-containing protein At3g04760,
           chloroplastic-like [Glycine max]
          Length = 570

 Score =  268 bits (684), Expect = 8e-69,   Method: Compositional matrix adjust.
 Identities = 155/480 (32%), Positives = 249/480 (51%), Gaps = 38/480 (7%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K L   C  G   ++   +  +  +   PD   C  LI GL     I+KA +V+ I+  +
Sbjct: 62  KSLSRSCKAGNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHIL-EN 120

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
            G PD I YN ++ G C+  +I SA  +LD M   G  PD++TYN ++ ++   G    A
Sbjct: 121 HGHPDLIAYNAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSA 180

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           + F    L++ C P ++TYTILIE    Q GI  A+++LD+M      PD+ TYNS++  
Sbjct: 181 LEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRG 240

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM-------N 354
            C++G  D A  +I+++ S+G  P+ ITYN LL  L ++G W+A  +++  M       N
Sbjct: 241 MCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEAN 300

Query: 355 EASHS----------------------------PTVFTYNILINGLCKYGLVDRAINSFN 386
             ++S                            P  + Y+ LI  LCK G VD AI   +
Sbjct: 301 VVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLD 360

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M+S  C PDIV YNT+L  LCK+   +EAL +   L    CSP   +YN++   L   G
Sbjct: 361 VMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNSMFSALWSTG 420

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--A 504
              +A+ +  +M++ G+ PD IT+ +LI   CR   V+EA++LL ++    ++ + S  +
Sbjct: 421 HKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVS 480

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y +V+ GLCK  +V  AI+VL  M+    +P++T ++ +++ +   G   +A  L   L+
Sbjct: 481 YNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFLIEGIGFGGCLNDARDLATTLV 540



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 199/376 (52%), Gaps = 2/376 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + CSRG L  A +  + + + N  P       LI   +    I++A K+L
Sbjct: 160 DIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEAMKLL 219

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+     PD  TYN ++ G+C+ G +  A  ++  +S  G  PDVITYN +LR + + 
Sbjct: 220 DEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRGLLNQ 279

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK++       D + +GC   ++TY++LI  VC+   +   + +L DM  +G  PD   Y
Sbjct: 280 GKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPDGYCY 339

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+   CK+G+ D A+ V++ ++S G  P+ + YNT+L  L  +   D    I + + E
Sbjct: 340 DPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGE 399

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SP   +YN + + L   G   RA+    +M+ K   PD +TYN+++  LC++GM++E
Sbjct: 400 VGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDGMVDE 459

Query: 416 ALQLL--HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           A++LL    +  S C P +++YN ++ GL K   +  A+ +   M++ G  P++ T+  L
Sbjct: 460 AIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETTYTFL 519

Query: 474 IWGFCRADQVEEAVDL 489
           I G      + +A DL
Sbjct: 520 IEGIGFGGCLNDARDL 535



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 109/330 (33%), Positives = 185/330 (56%), Gaps = 1/330 (0%)

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G F +++ F +  + KG  P ++  T LI  +     I +AI+V+  +   G  PD++ Y
Sbjct: 71  GNFNESLYFLRHLVNKGHKPDVVLCTKLIHGLFTSKTIDKAIQVMHILENHG-HPDLIAY 129

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++   C+  + D A  V++ + ++G  P+ +TYN L+ SL SRG  D+  +  + + +
Sbjct: 130 NAIITGFCRANRIDSAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLK 189

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  PTV TY ILI      G +D A+   ++M+  N QPD+ TYN+++  +C+EG ++ 
Sbjct: 190 ENCKPTVVTYTILIEATLLQGGIDEAMKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDR 249

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A Q++  ++    +P +ITYN L+ GL  +G  E    L   M+  G   + +T+  LI 
Sbjct: 250 AFQIISSISSKGYAPDVITYNILLRGLLNQGKWEAGYELMSDMVARGCEANVVTYSVLIS 309

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             CR  +VEE V LLK++ K+G K     Y  +I  LCK  +VD+AI+VL++MIS    P
Sbjct: 310 SVCRDGKVEEGVGLLKDMKKKGLKPDGYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVP 369

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   ++TI+  +      +EA  +++KL E
Sbjct: 370 DIVNYNTILACLCKQKRADEALSIFEKLGE 399



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 119/447 (26%), Positives = 212/447 (47%), Gaps = 42/447 (9%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K++    +   +  A +++ I+      PD      +I G  R +RI+ A +VL  M   
Sbjct: 97  KLIHGLFTSKTIDKAIQVMHILENHGH-PDLIAYNAIITGFCRANRIDSAYQVLDRMKNK 155

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIA--------------------------------- 208
           G  PD +TYN+++G LC RG + SA+                                  
Sbjct: 156 GFSPDIVTYNILIGSLCSRGMLDSALEFKNQLLKENCKPTVVTYTILIEATLLQGGIDEA 215

Query: 209 --LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
             LLDEM     +PD+ TYN+I+R M   G   +A         KG  P +ITY IL+  
Sbjct: 216 MKLLDEMLEINLQPDMFTYNSIIRGMCREGYVDRAFQIISSISSKGYAPDVITYNILLRG 275

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +  Q       E++ DM   GC  ++VTY+ L++  C+ GK ++ V ++ ++  +G++P+
Sbjct: 276 LLNQGKWEAGYELMSDMVARGCEANVVTYSVLISSVCRDGKVEEGVGLLKDMKKKGLKPD 335

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
              Y+ L+ +L   G  D   ++LD+M      P +  YN ++  LCK    D A++ F 
Sbjct: 336 GYCYDPLIAALCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFE 395

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           ++    C P+  +YN++  AL   G    AL ++  +      P  ITYN+LI  L + G
Sbjct: 396 KLGEVGCSPNASSYNSMFSALWSTGHKVRALGMILEMLDKGVDPDGITYNSLISCLCRDG 455

Query: 447 CMEKAMVLYGQM-MENG-ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            +++A+ L   M ME+    P  +++  ++ G C+  +V +A+++L  +  +G +   + 
Sbjct: 456 MVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCKVSRVSDAIEVLAAMVDKGCRPNETT 515

Query: 505 YRLVIHGL----CKSKKVDMAIQVLEL 527
           Y  +I G+    C +   D+A  ++ +
Sbjct: 516 YTFLIEGIGFGGCLNDARDLATTLVNM 542


>gi|302818914|ref|XP_002991129.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
 gi|300141060|gb|EFJ07775.1| hypothetical protein SELMODRAFT_236212 [Selaginella moellendorffii]
          Length = 614

 Score =  266 bits (681), Expect = 2e-68,   Method: Compositional matrix adjust.
 Identities = 170/543 (31%), Positives = 264/543 (48%), Gaps = 79/543 (14%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           P  + D  T   +L+ FC  G++  A +  D M  +N +P+   C  LI GL +  R   
Sbjct: 3   PICQPDVYTYAALLRGFCRGGEIDQAQRCFDEMRSKNLVPNVFLCSILIDGLCKAKRSID 62

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN---- 226
           A +  + M  SG V DT+ Y  ++ GL K  ++  A+A+L EM   GCEP+V+TYN    
Sbjct: 63  ALRCFRAMQGSGIVADTVIYTALLSGLWKEKRLDQALAILHEMRDHGCEPNVVTYNSLID 122

Query: 227 -------------------------------TILRTMFDNGKFKQAIGFWKDQLRKG--- 252
                                          T+L  +F  GK ++A+  +++ L +    
Sbjct: 123 GLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEMLDRRSHD 182

Query: 253 ----CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
               C P +ITY++LI+ +CK   +++A+E+L+ M   GCSPD++TY  LV+  CK+ K 
Sbjct: 183 MDDRCSPNVITYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKV 242

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSL----------------GSRGCW--------- 343
             A  V+  +L  G  PN +TYN+LLH L                  RGC          
Sbjct: 243 AAAWEVLREMLDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTL 302

Query: 344 -----------DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
                      DA   + D++++   +P +  YN+LINGLCK   VD +I    + VS  
Sbjct: 303 IDGLCKVGRVKDACAMLADMIDKGG-TPDLMIYNMLINGLCKADQVDESIALLRRAVSGG 361

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
            +PD+VTY++V+  LC+   L+EA +LL  +    C P +I Y+TLIDGL K G +++A 
Sbjct: 362 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 421

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            LY  M  +G   D +T+ TLI G C+A +V+EA  LL  + + G       Y  +I GL
Sbjct: 422 DLYEVMAGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 481

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
           C    +D AI+++E M  S   P    ++ ++  +      + A  L ++     V   G
Sbjct: 482 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGG 541

Query: 573 TTL 575
           T L
Sbjct: 542 TAL 544



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 142/439 (32%), Positives = 239/439 (54%), Gaps = 12/439 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCIN------LIRGLIRIDRIEKA 171
           T N +L      GKL  A  L  +++ RR+   D     N      LI GL + +R+ +A
Sbjct: 151 TYNTLLDGLFRTGKLERAMALFQEMLDRRSHDMDDRCSPNVITYSVLIDGLCKANRVSQA 210

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            ++L+ M   G  PD ITY ++V GLCK  ++ +A  +L EM  +GC P+++TYN++L  
Sbjct: 211 VELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHG 270

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +    +   A+   +D   +GC P ++TY  LI+ +CK   +  A  +L DM  +G +PD
Sbjct: 271 LCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPD 330

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           ++ YN L+N  CK  + D+++ ++   +S G++P+ +TY+++++ L      D   ++L 
Sbjct: 331 LMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLL 390

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            +      P V  Y+ LI+GLCK G VD A + +  M    C  D+VTY+T++  LCK G
Sbjct: 391 YVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGCDADVVTYSTLIDGLCKAG 450

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            ++EA  LL  +      P  +TYN+LI GL     +++A+ L  +M  +  +P  +T+ 
Sbjct: 451 RVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYN 510

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKR-----GNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            LI G CR ++V+ AV LL++   R     G  +   AY  +I GLCK+ +V  A+   +
Sbjct: 511 ILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSLIDGLCKAGRVAEALDYFQ 570

Query: 527 LMISSRYKPDDTVFSTIVK 545
            MI +   PD   +S +++
Sbjct: 571 EMIDNGVIPDHITYSILLE 589



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/422 (31%), Positives = 230/422 (54%), Gaps = 6/422 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C   +++ A +L++ M  R   PD      L+ GL +  ++  A +VL+ M
Sbjct: 193 TYSVLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREM 252

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G VP+ +TYN ++ GLC+  ++  A+AL+ +M+  GC P+V+TY T++  +   G+ 
Sbjct: 253 LDAGCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRV 312

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K A     D + KG  P L+ Y +LI  +CK   +  +I +L      G  PD+VTY+S+
Sbjct: 313 KDACAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSV 372

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C+  + D+A  ++  + SRG  P+ I Y+TL+  L   G  D    + ++M     
Sbjct: 373 IYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMAGDGC 432

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              V TY+ LI+GLCK G VD A     +MV     P  +TYN+++  LC    L+EA++
Sbjct: 433 DADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIE 492

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ-----MMENGISPDDITHRTL 473
           L+  +  S+C+P  +TYN LI G+ +   ++ A+VL  Q     +   G + D I + +L
Sbjct: 493 LVEEMERSNCAPSAVTYNILIHGMCRMERVDSAVVLLEQAKARCVAAGGTALDTIAYSSL 552

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV-DMAIQVLELMISSR 532
           I G C+A +V EA+D  +E+   G    +  Y +++ GL KSK + ++   VL+ M+   
Sbjct: 553 IDGLCKAGRVAEALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 612

Query: 533 YK 534
           Y+
Sbjct: 613 YR 614


>gi|357441365|ref|XP_003590960.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355480008|gb|AES61211.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  266 bits (679), Expect = 3e-68,   Method: Compositional matrix adjust.
 Identities = 157/480 (32%), Positives = 249/480 (51%), Gaps = 39/480 (8%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K L   C   K  ++   +  M  R   PD   C  LI+G   + +IEKA +V++I+   
Sbjct: 82  KTLNRSCKSAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKH 141

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD   YN ++ G CK  ++  A  +LD M   G EPDV+TYN ++      G+   A
Sbjct: 142 GK-PDVFAYNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLA 200

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +      L+  C P +ITYTILIE    Q GI  A+++LD+M   G  PD  TYN +VN 
Sbjct: 201 LRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNG 260

Query: 302 SCKQGKYDDAV-----------------------------------LVINNLLSRGMEPN 326
            CK+G  D A                                     +++++L +G EPN
Sbjct: 261 MCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPN 320

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
            ITY+TL+ +L   G  D    +L +M E + +P  ++Y+ LI+ LC+ G VD AI   +
Sbjct: 321 PITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLD 380

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M+S    PDI++YN++L +LCK G  +EAL +   L    C P   +YNTL   L   G
Sbjct: 381 DMISGGHLPDILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSG 440

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--A 504
              +A+ +  +M+ NGI PD+IT+ +LI   CR   V++A++LL ++ +   K + +  +
Sbjct: 441 DKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFE-SEKCQPTVIS 499

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  V+ GLCK +++  AI+VL  M++    P++T ++ +++ +   G   +A +L   L+
Sbjct: 500 YNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTLLIQGIGFAGWRYDAMELANLLV 559



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/377 (33%), Positives = 203/377 (53%), Gaps = 1/377 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++ NFC RG+L  A +++D + + N  P       LI   I    I++A K
Sbjct: 178 EPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEAMK 237

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L  M+  G  PD  TYN++V G+CK G +  A   L  +S +GC   V TYN +LR + 
Sbjct: 238 LLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRDLL 297

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           + GK++       D L KGC P  ITY+ LI  +C+   I  A  VL  M  +  +PD  
Sbjct: 298 NEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPDGY 357

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +Y+ L++  C++GK D A+  +++++S G  P+ ++YN++L SL   G  D    I + +
Sbjct: 358 SYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFEKL 417

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E    P   +YN L   L   G   RA+    +M+S    PD +TYN+++  LC++G++
Sbjct: 418 GEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDGLV 477

Query: 414 NEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++A++LL  +     C P +I+YNT++ GL K   +  A+ +   M+  G  P++ T+  
Sbjct: 478 DQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTYTL 537

Query: 473 LIWGFCRADQVEEAVDL 489
           LI G   A    +A++L
Sbjct: 538 LIQGIGFAGWRYDAMEL 554



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 129/490 (26%), Positives = 240/490 (48%), Gaps = 57/490 (11%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+++ F +  K+  A ++++I+ +  + PD      +I G  + DR++ ASKVL  M   
Sbjct: 117 KLIKGFFNMKKIEKAIQVMEILEKHGK-PDVFAYNAVISGFCKADRVDHASKVLDRMKKR 175

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD +TYN+++G  C RG++  A+ ++D++    C+P VITY  ++      G   +A
Sbjct: 176 GFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKDNCKPTVITYTILIEATITQGGIDEA 235

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD-------------------- 281
           +    + L +G  P   TY +++  +CK+  + RA E L                     
Sbjct: 236 MKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRAFEFLSRISKNGCVAGVSTYNILLRD 295

Query: 282 ---------------DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
                          DM ++GC P+ +TY++L+   C+ GK D+A  V+  +  + + P+
Sbjct: 296 LLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITALCRDGKIDEAKNVLKVMKEKALAPD 355

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
             +Y+ L+ +L   G  D   + LD M    H P + +YN ++  LCK G  D A+N F 
Sbjct: 356 GYSYDPLISALCREGKVDLAIEFLDDMISGGHLPDILSYNSILASLCKNGNADEALNIFE 415

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           ++    C P+  +YNT+ GAL   G    AL ++  +  +   P  ITYN+LI  L + G
Sbjct: 416 KLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMILEMLSNGIDPDEITYNSLISCLCRDG 475

Query: 447 CMEKAMVLYGQMMEN-GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
            +++A+ L   M E+    P  I++ T++ G C+  ++ +A+++L  +   G     + Y
Sbjct: 476 LVDQAIELLVDMFESEKCQPTVISYNTVLLGLCKVQRIIDAIEVLAAMVNEGCLPNETTY 535

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            L+I G+  +     A+++  L+++                   D ++E+++K +QK+  
Sbjct: 536 TLLIQGIGFAGWRYDAMELANLLVNM------------------DAISEDSFKRFQKI-- 575

Query: 566 WKVFEKGTTL 575
           + VF+    L
Sbjct: 576 FPVFDAHKEL 585



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 106/331 (32%), Positives = 185/331 (55%), Gaps = 1/331 (0%)

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           + K+ +++ F +  + +G  P +I  T LI+       I +AI+V++ +   G  PD+  
Sbjct: 90  SAKYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFA 148

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN++++  CK  + D A  V++ +  RG EP+ +TYN L+ +   RG  D   +++D + 
Sbjct: 149 YNAVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLL 208

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           + +  PTV TY ILI      G +D A+   ++M+S+  +PD  TYN V+  +CKEGML+
Sbjct: 209 KDNCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLD 268

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A + L  ++ + C   + TYN L+  L  +G  E    L   M+  G  P+ IT+ TLI
Sbjct: 269 RAFEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLI 328

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              CR  +++EA ++LK + ++       +Y  +I  LC+  KVD+AI+ L+ MIS  + 
Sbjct: 329 TALCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHL 388

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   +++I+  +  +G  +EA  +++KL E
Sbjct: 389 PDILSYNSILASLCKNGNADEALNIFEKLGE 419



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 207/399 (51%), Gaps = 1/399 (0%)

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           + +++   LQ MV  G  PD I    ++ G     +I  AI +++ +   G +PDV  YN
Sbjct: 92  KYDESLYFLQHMVNRGYKPDVILCTKLIKGFFNMKKIEKAIQVMEILEKHG-KPDVFAYN 150

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++       +   A        ++G  P ++TY ILI   C +  +  A+ V+D +  +
Sbjct: 151 AVISGFCKADRVDHASKVLDRMKKRGFEPDVVTYNILIGNFCGRGRLDLALRVMDQLLKD 210

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
            C P ++TY  L+  +  QG  D+A+ +++ +LSRG+ P+  TYN +++ +   G  D  
Sbjct: 211 NCKPTVITYTILIEATITQGGIDEAMKLLDEMLSRGLRPDRYTYNVVVNGMCKEGMLDRA 270

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            + L  +++      V TYNIL+  L   G  +      + M+ K C+P+ +TY+T++ A
Sbjct: 271 FEFLSRISKNGCVAGVSTYNILLRDLLNEGKWEYGEKLMSDMLVKGCEPNPITYSTLITA 330

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LC++G ++EA  +L ++   + +P   +Y+ LI  L ++G ++ A+     M+  G  PD
Sbjct: 331 LCRDGKIDEAKNVLKVMKEKALAPDGYSYDPLISALCREGKVDLAIEFLDDMISGGHLPD 390

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +++ +++   C+    +EA+++ +++G+ G      +Y  +   L  S     A+ ++ 
Sbjct: 391 ILSYNSILASLCKNGNADEALNIFEKLGEVGCPPNAGSYNTLFGALWSSGDKIRALGMIL 450

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            M+S+   PD+  +++++  +  DG+ ++A +L   + E
Sbjct: 451 EMLSNGIDPDEITYNSLISCLCRDGLVDQAIELLVDMFE 489


>gi|224125710|ref|XP_002319656.1| predicted protein [Populus trichocarpa]
 gi|222858032|gb|EEE95579.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  264 bits (675), Expect = 8e-68,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 238/457 (52%), Gaps = 37/457 (8%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M  ++  PD   C  LI+G      I+KA++V+ I+   G  PD   YN ++ G CK  +
Sbjct: 1   MVAKDYQPDVILCTKLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANR 59

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGCPPYLITYT 261
           I SA  +LD M   G  PDV+T+N ++ T    GK   A+  +++ L+   C P LITYT
Sbjct: 60  IESAKTVLDRMKRKGFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYT 119

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           ILIE    + GI  A+++LD+M   G  PD  TYN +    CK+GK D A   +  L SR
Sbjct: 120 ILIEAYILEGGIDEALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSR 179

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDK--------------------------------- 348
           G +P+ ITYN LL +L ++G WD  +K                                 
Sbjct: 180 GCKPDVITYNILLRALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEES 239

Query: 349 --ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             ++ +M E   +P  + Y+ LI   C+ G +D AI   + M+     PDIV YNT++ A
Sbjct: 240 VNLVKVMKEKGLTPDAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAA 299

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LCK G  + A+++   L+   C P + +YNT++  L   G   +A+ +  QM+  GI PD
Sbjct: 300 LCKNGNGDHAVEIFGKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPD 359

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            IT+ +LI   CR   V+EA+ LL ++     +    +Y+ V+ GLCK+ ++D AI+VL 
Sbjct: 360 VITYNSLISCLCRDGMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLA 419

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            MI +  +P++T ++ +++ +   G   +A +L   L
Sbjct: 420 AMIENGCQPNETTYTLLIEGIGFSGSRTQAMELANSL 456



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 119/375 (31%), Positives = 211/375 (56%), Gaps = 1/375 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKV 174
           D  T+N ++  FC +GK+  A K+ + + + N   P       LI   I    I++A K+
Sbjct: 78  DVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDEALKL 137

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L  M+  G  PDT TYN++  GLCK G++  A   +  ++  GC+PDVITYN +LR + +
Sbjct: 138 LDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLRALLN 197

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK+ +   +  +   +GC P ++TY+ILI  +C+   I  ++ ++  M  +G +PD   
Sbjct: 198 QGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTPDAYC 257

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ L+   C++GK D A+  ++ ++  G  P+ + YNT++ +L   G  D   +I   ++
Sbjct: 258 YDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIFGKLD 317

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E    P V +YN +++ L   G   RA+   +QM+SK   PD++TYN+++  LC++GM++
Sbjct: 318 EVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRDGMVD 377

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA+ LL  +      P +++Y T++ GL K   ++ A+ +   M+ENG  P++ T+  LI
Sbjct: 378 EAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTYTLLI 437

Query: 475 WGFCRADQVEEAVDL 489
            G   +    +A++L
Sbjct: 438 EGIGFSGSRTQAMEL 452



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 120/439 (27%), Positives = 218/439 (49%), Gaps = 37/439 (8%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+++ F +   +  A++++ I+ +  + PD      +I G  + +RIE A  VL  M   
Sbjct: 15  KLIKGFFNSRNIDKATRVMGILEKHGK-PDVFAYNAVISGFCKANRIESAKTVLDRMKRK 73

Query: 182 GGVPDTITYNMMVGGLCKRGQIR------------------------------------S 205
           G  PD +T+N+M+G  C +G+I                                      
Sbjct: 74  GFSPDVVTHNIMIGTFCGKGKIDLALKVFEELLKDNNCKPTLITYTILIEAYILEGGIDE 133

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A+ LLDEM   G EPD  TYN I R +   GK  +A  F +    +GC P +ITY IL+ 
Sbjct: 134 ALKLLDEMLSRGLEPDTFTYNVITRGLCKEGKVDRAFEFVRTLNSRGCKPDVITYNILLR 193

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            +  Q       + + ++   GC P++VTY+ L++  C+ GK +++V ++  +  +G+ P
Sbjct: 194 ALLNQGKWDEGEKWMSEIFSRGCEPNVVTYSILISSLCRDGKIEESVNLVKVMKEKGLTP 253

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           ++  Y+ L+ +    G  D   + LD M      P +  YN ++  LCK G  D A+  F
Sbjct: 254 DAYCYDPLIAAFCREGKLDMAIEFLDCMICDGFLPDIVNYNTIMAALCKNGNGDHAVEIF 313

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            ++    C P++ +YNT+L AL   G    AL ++  +      P +ITYN+LI  L + 
Sbjct: 314 GKLDEVGCPPNVSSYNTMLSALWSSGDRYRALGMISQMLSKGIDPDVITYNSLISCLCRD 373

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G +++A+ L   M+     P+ ++++T++ G C+A ++++A+++L  + + G +   + Y
Sbjct: 374 GMVDEAIGLLADMLSGRFQPNIVSYKTVLLGLCKAHRIDDAIEVLAAMIENGCQPNETTY 433

Query: 506 RLVIHGLCKSKKVDMAIQV 524
            L+I G+  S     A+++
Sbjct: 434 TLLIEGIGFSGSRTQAMEL 452


>gi|302806665|ref|XP_002985064.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
 gi|300147274|gb|EFJ13939.1| hypothetical protein SELMODRAFT_424099 [Selaginella moellendorffii]
          Length = 1636

 Score =  263 bits (673), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 152/457 (33%), Positives = 258/457 (56%), Gaps = 12/457 (2%)

Query: 115  NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI---PD-FHFCINLIRGLIRIDRIEK 170
            +D  T N +LQ      +  DA     +   RN++   P+ F F I LI GL R   I  
Sbjct: 842  HDTYTCNCLLQALLRLKRPKDA-----LQVYRNKLCCSPNMFTFTI-LIHGLCRAGDIGT 895

Query: 171  ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTIL 229
            A ++L+ M   G   + I +N+++ GLC   ++ SA+ L  EM  SG C PDV TY+TI+
Sbjct: 896  AYELLKEMPRHGVPQNVILHNVVIKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIV 955

Query: 230  RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             ++  +GK   A    +D + KGC P ++TY+ L+  +CK   +  A  +L  M   GCS
Sbjct: 956  DSLVKSGKVDDACRLVEDMVSKGCSPNVVTYSSLLHGLCKAGKLDEATALLQRMTRSGCS 1015

Query: 290  PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            P+IVTYN++++  CK G+ D+A  ++  ++  G +PN +TY  LL +    G  +    +
Sbjct: 1016 PNIVTYNTIIDGHCKLGRIDEAYHLLEEMVDGGCQPNVVTYTVLLDAFCKCGKAEDAIGL 1075

Query: 350  LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            +++M E  + P +FTYN L++  CK   V+RA    + M+ K C P++V+YNTV+  LCK
Sbjct: 1076 VEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSMIQKGCVPNVVSYNTVIAGLCK 1135

Query: 410  EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
               ++E + LL  +  ++C P ++T+NT+ID + K   ++ A  L+  + E+G +P+ +T
Sbjct: 1136 ATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRVDIAYELFNLIQESGCTPNLVT 1195

Query: 470  HRTLIWGFCRADQVEEAVDLLKEIG-KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            + +L+ G C++ + ++A  LL+E+  K+G       Y  VI GLCKSK+VD A ++   M
Sbjct: 1196 YNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQM 1255

Query: 529  ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +S    PDD  +S ++  +      +EA  + + +++
Sbjct: 1256 LSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLK 1292



 Score =  254 bits (649), Expect = 8e-65,   Method: Compositional matrix adjust.
 Identities = 135/450 (30%), Positives = 239/450 (53%), Gaps = 3/450 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  F   GK+  A +L D M R+          +++RGL   D  + +  VL
Sbjct: 160 DTVTYSTLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLC--DAGQCSDAVL 217

Query: 176 QIMVMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
               MS   P D++TYN M+ GL K  ++  AI LL+EM  +G  P+V +YNT+L     
Sbjct: 218 HFREMSKTCPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCK 277

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             + + A+   +  + +GCPP +++YT +I  +CK   +  A  V+D M   GC P+++T
Sbjct: 278 ANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVIT 337

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +LV+  C+ G  D AV ++  +  RG  PN+ITYN ++H    R   +   ++L +M 
Sbjct: 338 YGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMI 397

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P    Y+ +I+G CK G +  A +   QM+ + C+PD+   +T++ ALCK   ++
Sbjct: 398 QTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAID 457

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A +LL +  G  C+P ++ Y+ LI  L K   + +A      M++N   PD +T+ +++
Sbjct: 458 SAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVV 517

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C++ ++ +A  L   +   G       Y +VIH  CK   +D A ++LE M  ++  
Sbjct: 518 DGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCV 577

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           PD   +S ++  +   G  ++A+ ++Q+++
Sbjct: 578 PDVVTYSALINGLCKAGTVDKAFDVFQEML 607



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 240/443 (54%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L  FC   ++ +A  L++ M  R   PD      +I GL ++D++++A +V+  M+ 
Sbjct: 269 NTVLHGFCKANRVENALWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQ 328

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ ITY  +V G C+ G +  A+ L+ +M+  G  P+ ITYN I+         ++
Sbjct: 329 RGCQPNVITYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMER 388

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    +  ++ GCPP  I Y+ +I   CK   +  A ++L+ M   GC PD+   ++L++
Sbjct: 389 AHQVLQMMIQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLID 448

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK    D A  ++   +     P+ + Y+ L+H+L         +  LD+M +    P
Sbjct: 449 ALCKAAAIDSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYP 508

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN +++GLCK   ++ A   F++M +    PD+VTY+ V+ + CK+  L+ A ++L
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  + C P ++TY+ LI+GL K G ++KA  ++ +M+  G +P+ +T+ TLI G C+ 
Sbjct: 569 ERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKI 628

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           ++VE+A ++L+ + K+     +  Y  +I+GLC + +++ A +VL  M      PD   +
Sbjct: 629 NKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTY 688

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
            T+++ +      E   +L +++
Sbjct: 689 GTLLRALQKTNNLELVEQLLKEM 711



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/397 (34%), Positives = 218/397 (54%), Gaps = 4/397 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  FC  G L  A +L+  M  R   P+     N++    R + +E+A +VLQ+M
Sbjct: 337 TYGTLVDGFCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMM 396

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G  PD I Y+ ++ G CK G++R A  LL++M   GC PDV   +T++  +      
Sbjct: 397 IQTGCPPDAINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAI 456

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    +  +   C P ++ Y+ILI  +CK   +  A   LD M    C PD+VTYNS+
Sbjct: 457 DSAQELLRMSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSV 516

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  CK  + +DA L+ + + + G+ P+ +TY+ ++HS       D+  K+L+ M EA  
Sbjct: 517 VDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKC 576

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TY+ LINGLCK G VD+A + F +M+   C P++VTYNT++  LCK   + +A +
Sbjct: 577 VPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAE 636

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L ++   SC+P  ITY  LI+GL     +E+A  +  +M + G  PD +T+ TL+    
Sbjct: 637 MLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYGTLLRALQ 696

Query: 479 RADQVEEAVDLLKEI--GKRGNKMRNSA--YRLVIHG 511
           + + +E    LLKE+   + G    N A  +R VI G
Sbjct: 697 KTNNLELVEQLLKEMEATEEGQWNANGARLHRFVIRG 733



 Score =  238 bits (608), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 131/448 (29%), Positives = 231/448 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++       +L DA +L++ M      P+      ++ G  + +R+E A  +L
Sbjct: 229 DSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLL 288

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV  G  PD ++Y  ++ GLCK  Q+  A  ++D+M   GC+P+VITY T++      
Sbjct: 289 EQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRV 348

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A+   +    +G  P  ITY  ++   C++  + RA +VL  M   GC PD + Y
Sbjct: 349 GDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINY 408

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +++++  CK GK  +A  ++  ++ RG  P+    +TL+ +L      D+  ++L +   
Sbjct: 409 STIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSIG 468

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P V  Y+ILI+ LCK   +  A +  + MV   C PD+VTYN+V+  LCK   +N+
Sbjct: 469 MDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSRRIND 528

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   +  +   P ++TY+ +I    K   ++ A  +  +M E    PD +T+  LI 
Sbjct: 529 AFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAKCVPDVVTYSALIN 588

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+A  V++A D+ +E+   G       Y  +I GLCK  KV+ A ++LE+M      P
Sbjct: 589 GLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKINKVEQAAEMLEIMRKQSCTP 648

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D   ++ ++  + +    EEA+++ +++
Sbjct: 649 DSITYTCLINGLCNASRLEEAWRVLREM 676



 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 236/463 (50%), Gaps = 26/463 (5%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T   +L  FC  GK  DA  L+++M  +  +P+     +L+    + D +E+A ++L  M
Sbjct: 1055 TYTVLLDAFCKCGKAEDAIGLVEVMVEKGYVPNLFTYNSLLDMFCKKDEVERACQLLSSM 1114

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +  G VP+ ++YN ++ GLCK  ++   + LL++M  + C PD++T+NTI+  M    + 
Sbjct: 1115 IQKGCVPNVVSYNTVIAGLCKATKVHEGVLLLEQMLSNNCVPDIVTFNTIIDAMCKTYRV 1174

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA-IEGCSPDIVTYNS 297
              A   +      GC P L+TY  L+  +CK     +A  +L +M   +GCSPDI+TYN+
Sbjct: 1175 DIAYELFNLIQESGCTPNLVTYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNT 1234

Query: 298  LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
            +++  CK  + D A  +   +LS G+ P+ +TY+ ++ SL      D  + +L++M +  
Sbjct: 1235 VIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNG 1294

Query: 358  HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
              P   TY  LI+G CK G +D+A+     ++SK   PD+VT++  +  L K G L +A 
Sbjct: 1295 FDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAG 1354

Query: 418  QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +LL  +  +   P  +TYNTL+ G       E A+ L+  M + G  PD+ T+ TL+   
Sbjct: 1355 ELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHL 1414

Query: 478  CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV---------LELM 528
                  +   DLL E+ K    M ++ ++L  H L  S K++ +I+V         +  M
Sbjct: 1415 VDKKSYK---DLLAEVSK---SMVDTGFKLN-HEL--SSKLEASIEVEADVRLGCAIVDM 1465

Query: 529  ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
                  P D       +KV  +GM +    LW  ++   VF K
Sbjct: 1466 FGKCGSPQDA------RKVF-EGMDQRNVVLWSAMLGVYVFHK 1501



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 202/411 (49%), Gaps = 1/411 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
            LI G IR  +I  A ++   M   G       +  ++ GLC  GQ   A+    EMS +
Sbjct: 166 TLISGFIRAGKILPAYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREMSKT 225

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
            C PD +TYNT++  +  + +   AI   ++ +  G  P + +Y  ++   CK   +  A
Sbjct: 226 -CPPDSVTYNTMINGLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENA 284

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + +L+ M   GC PD+V+Y +++N  CK  + D+A  V++ ++ RG +PN ITY TL+  
Sbjct: 285 LWLLEQMVTRGCPPDVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDG 344

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               G  D   +++  M E  + P   TYN +++  C+   ++RA      M+   C PD
Sbjct: 345 FCRVGDLDGAVELVRKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPD 404

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            + Y+T++   CK G L EA  LL  +    C P +   +TLID L K   ++ A  L  
Sbjct: 405 AINYSTIISGFCKAGKLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLR 464

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
             +    +PD + +  LI   C+A ++ EA   L  + K         Y  V+ GLCKS+
Sbjct: 465 MSIGMDCAPDVVAYSILIHALCKAKRLPEAESWLDVMVKNRCYPDVVTYNSVVDGLCKSR 524

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +++ A  + + M ++   PD   +S ++     D   + A+K+ +++ E K
Sbjct: 525 RINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLERMKEAK 575



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 179/348 (51%), Gaps = 1/348 (0%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G + ++   N +L  +    ++ QA   ++ ++        +TY+ LI    +   I  A
Sbjct: 121 GYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILPA 180

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            E+ D+M  +G       + S++   C  G+  DAVL     +S+   P+S+TYNT+++ 
Sbjct: 181 YELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFRE-MSKTCPPDSVTYNTMING 239

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L      D   ++L+ M +   +P VF+YN +++G CK   V+ A+    QMV++ C PD
Sbjct: 240 LSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPPD 299

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +V+Y TV+  LCK   ++EA +++  +    C P +ITY TL+DG  + G ++ A+ L  
Sbjct: 300 VVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELVR 359

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M E G  P+ IT+  ++  FCR + +E A  +L+ + + G       Y  +I G CK+ 
Sbjct: 360 KMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQTGCPPDAINYSTIISGFCKAG 419

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           K+  A  +LE MI    +PD    ST++  +      + A +L +  I
Sbjct: 420 KLREAHDLLEQMIRRGCRPDVACLSTLIDALCKAAAIDSAQELLRMSI 467



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 123/511 (24%), Positives = 227/511 (44%), Gaps = 42/511 (8%)

Query: 84   VLAVNKKLRGLTITKKSHDPSL--PSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
            V+  N  + GL  +++ +D  L         V  D  T + ++ +FC    L  A K+++
Sbjct: 510  VVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKMLE 569

Query: 142  IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
             M     +PD      LI GL +   ++KA  V Q M+  G  P+ +TYN ++ GLCK  
Sbjct: 570  RMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKIN 629

Query: 202  QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
            ++  A  +L+ M    C PD ITY  ++  + +  + ++A    ++   KGC P  +TY 
Sbjct: 630  KVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTYG 689

Query: 262  ILIEQVCKQCGIARAIEVLDDM------------------AIEG---------CSPDIVT 294
             L+  + K   +    ++L +M                   I G             + +
Sbjct: 690  TLLRALQKTNNLELVEQLLKEMEATEEGQWNANGARLHRFVIRGDVLMMAMAVPMAALTS 749

Query: 295  YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
               +++   +QG++       +      +      ++ ++  L SR  W+  +  L+   
Sbjct: 750  QTRVLDSKDQQGQFSPRP---HQYRVTAVATQGGFHHKIVRILNSRFAWEYAETALE--- 803

Query: 355  EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGML 413
              +   T      ++ G+ + G  D A+  F+   S+     D  T N +L AL +    
Sbjct: 804  RFTGKLTTTVVGKVLQGV-RNG--DAALGFFDWATSQEGYNHDTYTCNCLLQALLRLKRP 860

Query: 414  NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             +ALQ+    N   CSP + T+  LI GL + G +  A  L  +M  +G+  + I H  +
Sbjct: 861  KDALQVYR--NKLCCSPNMFTFTILIHGLCRAGDIGTAYELLKEMPRHGVPQNVILHNVV 918

Query: 474  IWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSR 532
            I G C A +++ A++L KE+ + G+   +   Y  ++  L KS KVD A +++E M+S  
Sbjct: 919  IKGLCSARKLDSALELFKEMEESGSCPPDVFTYSTIVDSLVKSGKVDDACRLVEDMVSKG 978

Query: 533  YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              P+   +S+++  +   G  +EA  L Q++
Sbjct: 979  CSPNVVTYSSLLHGLCKAGKLDEATALLQRM 1009



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 142/280 (50%), Gaps = 1/280 (0%)

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +G   +I   N L+N   K  +Y  A  +  + +      +++TY+TL+      G    
Sbjct: 120 DGYQHEIFCCNCLLNVLVKAHQYSQAHDLFRSRIEGQWGGDTVTYSTLISGFIRAGKILP 179

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             ++ D MN          +  ++ GLC  G    A+  F +M SK C PD VTYNT++ 
Sbjct: 180 AYELFDEMNRKGLKAHAGVHKSILRGLCDAGQCSDAVLHFREM-SKTCPPDSVTYNTMIN 238

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            L K   L++A++LL  +  +  +P + +YNT++ G  K   +E A+ L  QM+  G  P
Sbjct: 239 GLSKSDRLDDAIRLLEEMVDNGFAPNVFSYNTVLHGFCKANRVENALWLLEQMVTRGCPP 298

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +++ T+I G C+ DQV+EA  ++ ++ +RG +     Y  ++ G C+   +D A++++
Sbjct: 299 DVVSYTTVINGLCKLDQVDEACRVMDKMIQRGCQPNVITYGTLVDGFCRVGDLDGAVELV 358

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             M    Y+P+   ++ I+         E A+++ Q +I+
Sbjct: 359 RKMTERGYRPNAITYNNIMHVFCRRNDMERAHQVLQMMIQ 398



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 166/389 (42%), Gaps = 62/389 (15%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
            T N ++   C   +   A  L+  M R+    PD      +I GL +  R+++A K+   
Sbjct: 1195 TYNSLVHGLCKSRRFDQAEYLLREMTRKQGCSPDIITYNTVIDGLCKSKRVDRAYKLFLQ 1254

Query: 178  MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            M+  G  PD +TY++++  LCK   +  A  +L+ M  +G +P  ITY T++      G 
Sbjct: 1255 MLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 1314

Query: 238  FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              +A+   +  L KG  P ++T++I I+ + K+  + +A E+L+ M   G  PD VTYN+
Sbjct: 1315 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 1374

Query: 298  LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
            L+   C     +DAV +   +   G EP++ TY TL+  L  +  +       D++ E S
Sbjct: 1375 LLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYK------DLLAEVS 1428

Query: 358  HS--PTVFTYN---------------------ILINGLCKYGLVDRAINSFNQMVSKNC- 393
             S   T F  N                      +++   K G    A   F  M  +N  
Sbjct: 1429 KSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCGSPQDARKVFEGMDQRNVV 1488

Query: 394  ------------------------------QPDIVTYNTVLGALCKEGMLNEAL-QLLHL 422
                                          +PD VT+ ++L   C  G+L+ A+ + + +
Sbjct: 1489 LWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSI 1548

Query: 423  LNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
                   P +  ++ +ID L + G + +A
Sbjct: 1549 SRDYGLEPGVDHFSCVIDLLGRLGLVNEA 1577



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/184 (32%), Positives = 95/184 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C   ++ DA  L D M     +PD      +I    + + ++ A K+L
Sbjct: 509 DVVTYNSVVDGLCKSRRINDAFLLFDRMRAAGVMPDVVTYSIVIHSFCKDNNLDSAFKML 568

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +  VPD +TY+ ++ GLCK G +  A  +  EM   GC P+++TYNT++  +   
Sbjct: 569 ERMKEAKCVPDVVTYSALINGLCKAGTVDKAFDVFQEMLGCGCAPNLVTYNTLIDGLCKI 628

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K +QA    +   ++ C P  ITYT LI  +C    +  A  VL +M  +GC PD +TY
Sbjct: 629 NKVEQAAEMLEIMRKQSCTPDSITYTCLINGLCNASRLEEAWRVLREMKDKGCLPDRMTY 688

Query: 296 NSLV 299
            +L+
Sbjct: 689 GTLL 692



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/383 (22%), Positives = 158/383 (41%), Gaps = 52/383 (13%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N ++   C   ++  A KL   M      PD      +I  L +   +++A+ VL++M
Sbjct: 1231 TYNTVIDGLCKSKRVDRAYKLFLQMLSDGLAPDDVTYSIVISSLCKWRFMDEANNVLELM 1290

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + +G  P  ITY  ++ G CK G +  A+ +L  +   G  PDV+T++  +  +   G+ 
Sbjct: 1291 LKNGFDPGAITYGTLIDGFCKTGNLDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRL 1350

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +QA    +  LR G  P  +TY  L++  C       A+++ + M   GC PD  TY +L
Sbjct: 1351 RQAGELLETMLRAGLVPDTVTYNTLLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTL 1410

Query: 299  VNFSCKQGKYDDAVL-VINNLLSRGMEPNSITYNTLLHSL-------------------- 337
            V     +  Y D +  V  +++  G + N    + L  S+                    
Sbjct: 1411 VGHLVDKKSYKDLLAEVSKSMVDTGFKLNHELSSKLEASIEVEADVRLGCAIVDMFGKCG 1470

Query: 338  ---GSRGCWDAVDK------------------------ILDIMNEASHSPTVFTYNILIN 370
                +R  ++ +D+                        +  +M      P   T+  L+ 
Sbjct: 1471 SPQDARKVFEGMDQRNVVLWSAMLGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLT 1530

Query: 371  GLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
              C  GL+D A++ F  +      +P +  ++ V+  L + G++NEA  L+    G  C 
Sbjct: 1531 MCCHAGLLDAAVDEFVSISRDYGLEPGVDHFSCVIDLLGRLGLVNEAEDLML---GMPCK 1587

Query: 430  PCLITYNTLIDGLAKKGCMEKAM 452
            P   T+N L+      G  E+A+
Sbjct: 1588 PSAATWNCLLSAYKICGDFERAL 1610



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 87/365 (23%), Positives = 166/365 (45%), Gaps = 56/365 (15%)

Query: 108  SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
            SDG  +  D+ T + ++ + C    + +A+ ++++M +    P       LI G  +   
Sbjct: 1257 SDG--LAPDDVTYSIVISSLCKWRFMDEANNVLELMLKNGFDPGAITYGTLIDGFCKTGN 1314

Query: 168  IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
            ++KA ++LQ+++  G  PD +T+++ +  L KRG++R A  LL+ M  +G  PD +TYNT
Sbjct: 1315 LDKALEILQLLLSKGSYPDVVTFSIFIDWLSKRGRLRQAGELLETMLRAGLVPDTVTYNT 1374

Query: 228  ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ----------------- 270
            +L+   D    + A+  ++   + GC P   TYT L+  +  +                 
Sbjct: 1375 LLKGFCDASLTEDAVDLFEVMRQCGCEPDNATYTTLVGHLVDKKSYKDLLAEVSKSMVDT 1434

Query: 271  ---------CGIARAIEVLDDMAIEGC----------SP-------------DIVTYNSL 298
                       +  +IEV  D+ + GC          SP             ++V ++++
Sbjct: 1435 GFKLNHELSSKLEASIEVEADVRL-GCAIVDMFGKCGSPQDARKVFEGMDQRNVVLWSAM 1493

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDKILDIMNEAS 357
            +       + + A  +   +   G+EP+++T+ +LL      G  DA VD+ + I  +  
Sbjct: 1494 LGVYVFHKQEEQAFGLWRVMGLEGVEPDAVTFLSLLTMCCHAGLLDAAVDEFVSISRDYG 1553

Query: 358  HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
              P V  ++ +I+ L + GLV+ A    + M+   C+P   T+N +L A    G    AL
Sbjct: 1554 LEPGVDHFSCVIDLLGRLGLVNEA---EDLMLGMPCKPSAATWNCLLSAYKICGDFERAL 1610

Query: 418  QLLHL 422
            ++  L
Sbjct: 1611 RVAEL 1615


>gi|356551785|ref|XP_003544254.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 603

 Score =  263 bits (672), Expect = 2e-67,   Method: Compositional matrix adjust.
 Identities = 162/489 (33%), Positives = 258/489 (52%), Gaps = 54/489 (11%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARR-NQIPDFHFCINLIRGLIRIDRIEKASK 173
           N E++    L      G+L +AS+ ++ M  + N +P    C  LI    +I R + A++
Sbjct: 111 NFEESEIHHLHVLIKNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATR 170

Query: 174 VLQIMVMSGGVPDTITYN---------MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           ++ I+  SG V D   YN         +++GG C  G++  A+ +LD MSVS   P+ I 
Sbjct: 171 IMGILEESGAVIDITIYNFFCLPKKNNVLIGGYCXSGEVEEALRVLDCMSVS---PNGIN 227

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y+TILR++ D  K KQ +     QL+  C P ++TYT LI+  CK   + +A+++L +M 
Sbjct: 228 YDTILRSLCDRCKLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMV 287

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            + C P++VTYN+L+   C +G+ D+ +  + NL S G +P+ I+Y  +LHSL S G W 
Sbjct: 288 SKECKPNVVTYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWT 347

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN---------------SFNQ-- 387
              K+L  M     S  V T+N LIN LC+ GL+ +A N               S+N   
Sbjct: 348 DAMKLLASMLCKGCSLNVVTFNTLINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSI 407

Query: 388 -------------MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
                        MVS+ C PDIVTYN +L ALCK+  +++A+++L  L+     P +IT
Sbjct: 408 GGFCNEKSXYLEIMVSRGCYPDIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVIT 467

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y+ +IDGL K G  + A+ L  +    G+ P+ IT  +++ G  R  +V EA+ +   + 
Sbjct: 468 YSIIIDGLLKVGKTDLALELLEEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLE 527

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
             G +    AY L+I GLCK+++            S   KP +  ++ +VK +  +G  +
Sbjct: 528 GLGIRPNAFAYNLIIMGLCKTQQT-----------SRGCKPTEATYNILVKGITSEGXPK 576

Query: 555 EAYKLWQKL 563
           EA KLW +L
Sbjct: 577 EASKLWSEL 585



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 195/399 (48%), Gaps = 57/399 (14%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           K NN ++  +C  G++ +A +++D M+      ++     ++R L    ++++  +VL  
Sbjct: 194 KKNNVLIGGYCXSGEVEEALRVLDCMSVSPNGINYD---TILRSLCDRCKLKQGMEVLDR 250

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            +     PD +TY  ++   CK  ++  A+ LL EM    C+P+V+TYN +++ + + G+
Sbjct: 251 QLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVVTYNALIKGICNEGR 310

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             + I F K+    G  P +I+YTI++  +        A+++L  M  +GCS ++VT+N+
Sbjct: 311 LDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASMLCKGCSLNVVTFNT 370

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN-----------TLLHSLGSRGCWD-- 344
           L+NF C++G    A  V+  +      PNSI+YN             L  + SRGC+   
Sbjct: 371 LINFLCQKGLLGKAFNVLEMIXKHVCTPNSISYNPSIGGFCNEKSXYLEIMVSRGCYPDI 430

Query: 345 --------------AVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQ 387
                          VD  ++I+ + S     P V TY+I+I+GL K G  D A+    +
Sbjct: 431 VTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLALELLEE 490

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG---------------------- 425
             +K  +P+++T+ +V+G + ++G ++EA+++ H L G                      
Sbjct: 491 ACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMGLCKTQQ 550

Query: 426 --SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
               C P   TYN L+ G+  +G  ++A  L+ ++   G
Sbjct: 551 TSRGCKPTEATYNILVKGITSEGXPKEASKLWSELYSKG 589



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 62/241 (25%), Positives = 110/241 (45%), Gaps = 13/241 (5%)

Query: 334 LHSLGSRGCWDAVDKILDIM-NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           LH L   G  D   + L+ M N+ +  P V     LI+  CK G    A      +    
Sbjct: 120 LHVLIKNGELDEASRFLEYMTNKGNIMPCVIACTALISEFCKIGRTKNATRIMGILEESG 179

Query: 393 CQPDIVTYN---------TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              DI  YN          ++G  C  G + EAL++L  +   S SP  I Y+T++  L 
Sbjct: 180 AVIDITIYNFFCLPKKNNVLIGGYCXSGEVEEALRVLDCM---SVSPNGINYDTILRSLC 236

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
            +  +++ M +  + ++    PD +T+  LI   C+  +V +A+ LL E+  +  K    
Sbjct: 237 DRCKLKQGMEVLDRQLQIKCYPDVVTYTELIDAACKDSRVGQAMKLLIEMVSKECKPNVV 296

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I G+C   ++D  I+ L+ + S  Y+PD   ++ ++  ++  G   +A KL   +
Sbjct: 297 TYNALIKGICNEGRLDEVIRFLKNLPSYGYQPDVISYTIVLHSLSSGGRWTDAMKLLASM 356

Query: 564 I 564
           +
Sbjct: 357 L 357



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/161 (22%), Positives = 72/161 (44%), Gaps = 24/161 (14%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C   K+ DA +++  ++ +   PD      +I GL+++ + + A ++L
Sbjct: 429 DIVTYNILLAALCKDRKVDDAVEILKQLSFKGLKPDVITYSIIIDGLLKVGKTDLALELL 488

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD------------------------ 211
           +     G  P+ IT+  +VGG+ ++G++  AI +                          
Sbjct: 489 EEACTKGLKPNLITFTSVVGGISRKGKVHEAIKIFHFLEGLGIRPNAFAYNLIIMGLCKT 548

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           + +  GC+P   TYN +++ +   G  K+A   W +   KG
Sbjct: 549 QQTSRGCKPTEATYNILVKGITSEGXPKEASKLWSELYSKG 589


>gi|125548475|gb|EAY94297.1| hypothetical protein OsI_16066 [Oryza sativa Indica Group]
          Length = 602

 Score =  261 bits (666), Expect = 9e-67,   Method: Compositional matrix adjust.
 Identities = 150/529 (28%), Positives = 272/529 (51%), Gaps = 41/529 (7%)

Query: 75  QDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLT 134
           + +  +   +L  +++L  L + +   D +L   +      D    N+++++ C RG+  
Sbjct: 62  RQQQQAPRRLLGSDRRLSAL-VHRGDLDAALRLVESSPRPPDAALANRLVRDLCRRGRPD 120

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           DA +++        +  +     L  G  R  R+  A +V+  M +    P+  TYN ++
Sbjct: 121 DAERVVGACGPAATVVAYGA---LTDGYCRAGRLGDARRVVGGMPVQ---PNAYTYNPLI 174

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
             LC+RGQ+R A+++LD+M   GC PDV+TYN +L        ++QA+        +GC 
Sbjct: 175 HTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMELIDLMRAEGCT 234

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P  +TY +L++ +C +  +  A+E+L ++   GC P  V YN+++   C   ++ DA  +
Sbjct: 235 PNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCSAERWGDADEL 294

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +  +L     PN  T+N +++SL  +G      ++L+ M++   +  + TYN +INGLC+
Sbjct: 295 VTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVTYNAIINGLCE 354

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
              VD A+   ++M S  C+PDIVTYNT+L  LC      +A +L+  +  + C P  +T
Sbjct: 355 QRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDNMTQNGCLPDNVT 414

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           +NTLI  L +KG M  A+ ++ QM + G +P+ IT+ T+I G  +A ++++A++L  E+G
Sbjct: 415 FNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLDQALELFNEMG 474

Query: 495 KRG---------------------------NKMRNSA-------YRLVIHGLCKSKKVDM 520
            +G                            K+++S        Y  ++ GLC++ K + 
Sbjct: 475 HKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILLGLCRNGKTEF 534

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           AI ++  M+SS   PDD  +  +++ +A +G   EA +L  KL    V 
Sbjct: 535 AIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVL 583



 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 237/436 (54%), Gaps = 6/436 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T N ++   C RG++ DA  ++D M  R   PD      L+    +     +A 
Sbjct: 163 VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 222

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +++ +M   G  P+ +TYN+++ G+C  G +  A+ LL  +   GC+P  + YNT+L+ +
Sbjct: 223 ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 282

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               ++  A     + LR+ CPP   T+ ++I  +C++  + +AI++L+ M+  GC+ +I
Sbjct: 283 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 342

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+++N  C+Q   D A+ +++ + S G +P+ +TYNTLL  L S   W   ++++D 
Sbjct: 343 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAAQWVDAEELMDN 402

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +    P   T+N LI  LC+ GL+  AI  F QM  K C P+ +TY+T++  L K   
Sbjct: 403 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 462

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L++AL+L + +     +P  I Y  L + L     +E+A+    ++ ++GISP  + +  
Sbjct: 463 LDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 521

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++ G CR  + E A+D++  +   G    +  Y ++I GL     ++ A ++L + + SR
Sbjct: 522 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL-IKLCSR 580

Query: 533 YKPDDTVFSTIVKKVA 548
               D + ++++K  A
Sbjct: 581 ----DVLVNSLIKSEA 592


>gi|302791141|ref|XP_002977337.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
 gi|300154707|gb|EFJ21341.1| hypothetical protein SELMODRAFT_107186 [Selaginella moellendorffii]
          Length = 636

 Score =  259 bits (662), Expect = 2e-66,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 244/444 (54%), Gaps = 2/444 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G+L +A KL + M   +  PD      L+ GL + DR+++A +VL+ M    
Sbjct: 188 LIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 247

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ ITY+ ++ GLCK GQ+R A  +   M V G EP+V+TYN+++           A+
Sbjct: 248 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 307

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++    GC P +ITY  LI+ +CK      A  +  DM  + C+PD++TY+ L+   
Sbjct: 308 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 367

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK  + D A  + +++L + + P+ +T++TL+    + G  D  +++L+ M  +  SP V
Sbjct: 368 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 427

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TY  L++G CK G +  A     +M  + CQP++VTY  ++ A C+ G    A +LL  
Sbjct: 428 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEE 487

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGISPDDITHRTLIWGFCRAD 481
           + G+   P +ITY +LI G    G +E+A  +  ++  +     D   +R ++ G CR  
Sbjct: 488 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTG 547

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM-ISSRYKPDDTVF 540
           ++  A++LL+ I + G   R+  Y  +I GLC+ K++  A++VLE M +S + +P+   +
Sbjct: 548 RMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAY 607

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
             +++++A +G  EEA  L  +L+
Sbjct: 608 EAVIQELAREGRHEEANALADELL 631



 Score =  256 bits (655), Expect = 2e-65,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 242/445 (54%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC + K+  A KL   M     +P+      L+ GL R   +++A ++L  M
Sbjct: 79  TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 138

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD  +Y+ ++ GLCK G+I  A+ + ++ S   C PDV+ Y+T++  +   G+ 
Sbjct: 139 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRL 198

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   ++      C P ++T+T L++ +CK   +  A +VL+ M    C+P+++TY+SL
Sbjct: 199 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSL 258

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G+  DA  V   ++ RG+EPN +TYN+L+H        D+   +++ M     
Sbjct: 259 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 318

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TYN LI+GLCK G    A   F  M +K C PD++TY+ ++G  CK   ++ A  
Sbjct: 319 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 378

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +   +  P ++T++TL++G    G ++ A  L  +M+ +  SPD  T+ +L+ GFC
Sbjct: 379 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 438

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  ++ EA  +LK + KRG +     Y  +I   C++ K  +A ++LE M+ +  +P+  
Sbjct: 439 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVI 498

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            + +++      G  EEA K+ ++L
Sbjct: 499 TYRSLIGGFCGTGDLEEARKMLERL 523



 Score =  245 bits (625), Expect = 6e-62,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 230/449 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++  FC   K+  A  L+  M      P+      +I G  R  +++ A K+ 
Sbjct: 41  NEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF 100

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV +G +P+ +TYN ++ GLC+ G +  A  LLDEM   G +PD  +Y+T++  +   
Sbjct: 101 RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKT 160

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+  ++D     CPP ++ Y+ LI  +CK   +  A ++ + M    C PD+VT+
Sbjct: 161 GKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTF 220

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++  CK  +  +A  V+  +  R   PN ITY++L+  L   G      ++   M  
Sbjct: 221 TALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIV 280

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V TYN LI+G C    VD A+    +M +  C PDI+TYNT++  LCK G   E
Sbjct: 281 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 340

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +    C+P +ITY+ LI G  K   ++ A  L+  M++  + PD +T  TL+ 
Sbjct: 341 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 400

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+C A  V++A  LL+E+           Y  ++ G CK  ++  A +VL+ M     +P
Sbjct: 401 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 460

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +   ++ ++      G    AYKL ++++
Sbjct: 461 NVVTYTALIDAFCRAGKPTVAYKLLEEMV 489



 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 236/441 (53%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C   +L +A+     M ++  +P+      LI G  ++ ++ +A  +L+ M  SG
Sbjct: 13  MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 72

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TY+ ++ G C++ ++ +A  L  +M  +GC P+++TYNT+L  +  NG   +A 
Sbjct: 73  LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 132

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               +   +G  P   +Y  L+  +CK   I  A++V +D +   C PD+V Y++L+   
Sbjct: 133 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 192

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G+ D+A  +   +     EP+ +T+  L+  L          ++L+ M + + +P V
Sbjct: 193 CKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 252

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ LI+GLCK G V  A   F +M+ +  +P++VTYN+++   C    ++ AL L+  
Sbjct: 253 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 312

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  + C P +ITYNTLIDGL K G   +A  L+G M     +PD IT+  LI GFC+ ++
Sbjct: 313 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 372

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++ A  L  ++ K+        +  ++ G C +  VD A ++LE M++S   PD   +++
Sbjct: 373 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 432

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           +V      G   EA ++ +++
Sbjct: 433 LVDGFCKVGRMVEARRVLKRM 453



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 122/414 (29%), Positives = 213/414 (51%), Gaps = 35/414 (8%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + IT+ +M+ GLCK  ++  A     +M   G  P+  TYN ++       K  +A    
Sbjct: 6   NVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLL 65

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           K+    G  P ++TY+ +I   C+Q  +  A ++   M   GC P++VTYN+L++  C+ 
Sbjct: 66  KEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRN 125

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G  D+A  +++ +  RG++P+  +Y+TL+  L   G  D   K+ +  +     P V  Y
Sbjct: 126 GLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAY 185

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           + LI GLCK G +D A   F +M   +C+PD+VT+  ++  LCK   L EA Q+L  +  
Sbjct: 186 STLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMED 245

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
            +C+P +ITY++LIDGL K G +  A  ++ +M+  GI P+ +T+ +LI GFC  + V+ 
Sbjct: 246 RNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDS 305

Query: 486 AVDLLKEIGKRG------------------------NKMRNS-----------AYRLVIH 510
           A+ L++E+   G                        N++               Y  +I 
Sbjct: 306 ALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIG 365

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           G CK +++DMA  + + M+     PD   FST+V+   + G+ ++A +L ++++
Sbjct: 366 GFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 419



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 112/343 (32%), Positives = 189/343 (55%)

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           CE +VIT+  ++  +    +  +A  ++    +KG  P   TY +LI   CK   + RA 
Sbjct: 3   CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 62

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L +M   G +P++VTY+++++  C+Q K D A  +   ++  G  PN +TYNTLL  L
Sbjct: 63  LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 122

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D   ++LD M E    P  F+Y+ L+ GLCK G +D A+  F    + +C PD+
Sbjct: 123 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 182

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V Y+T++  LCK G L+EA +L   +  +SC P ++T+  L+DGL K   +++A  +   
Sbjct: 183 VAYSTLIAGLCKTGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 242

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M +   +P+ IT+ +LI G C+  QV +A ++ K +  RG +     Y  +IHG C +  
Sbjct: 243 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 302

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           VD A+ ++E M ++   PD   ++T++  +   G   EA +L+
Sbjct: 303 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF 345



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 71/204 (34%), Positives = 119/204 (58%)

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V T+ I+I+GLCK   +  A   F +M  K   P+  TYN ++   CK   ++ A  LL 
Sbjct: 7   VITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLK 66

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +  S  +P ++TY+T+I G  ++  ++ A  L+ QM+ENG  P+ +T+ TL+ G CR  
Sbjct: 67  EMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNG 126

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            ++EA +LL E+ +RG +    +Y  ++ GLCK+ K+DMA++V E   +    PD   +S
Sbjct: 127 LMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYS 186

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
           T++  +   G  +EA KL++K+ E
Sbjct: 187 TLIAGLCKTGRLDEACKLFEKMRE 210



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 148/347 (42%), Gaps = 39/347 (11%)

Query: 84  VLAVNKKLRGLTITKKSHDPSLPSSD--GPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           ++  N  + GL  T ++ + +    D    F   D  T + ++  FC   ++  A  L D
Sbjct: 322 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 381

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            M ++  +PD      L+ G      ++ A ++L+ MV S   PD  TY  +V G CK G
Sbjct: 382 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 441

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++  A  +L  M+  GC+P+V+TY  ++      GK   A    ++ +  G  P +ITY 
Sbjct: 442 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYKLLEEMVGNGVQPNVITYR 501

Query: 262 ILIEQVCKQCGIARAIEVLDDMAI-EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            LI   C    +  A ++L+ +   E C  D+  Y  +++  C+ G+   A+        
Sbjct: 502 SLIGGFCGTGDLEEARKMLERLERDENCKADMFAYRVMMDGLCRTGRMSAAL-------- 553

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
                                      ++L+ + ++   P    Y  LI GLC+   + +
Sbjct: 554 ---------------------------ELLEAIKQSGTPPRHDIYVALIRGLCQGKELGK 586

Query: 381 AINSFNQM-VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           A+    +M +S+  +P+   Y  V+  L +EG   EA  L   L G+
Sbjct: 587 AMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGN 633


>gi|224103543|ref|XP_002313097.1| predicted protein [Populus trichocarpa]
 gi|222849505|gb|EEE87052.1| predicted protein [Populus trichocarpa]
          Length = 751

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 147/472 (31%), Positives = 244/472 (51%), Gaps = 15/472 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++ FC+ G L    +  + M R   +P+      +I    ++ RI++A K+L+ M +
Sbjct: 207 NILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKLLRSMGL 266

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +TYNM++ GLC+ G+I     +L EM   G  PD +TYNT++      G F Q
Sbjct: 267 EGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQ 326

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    + LR G PP ++TYT LI  +CK   + RA+E  D M + G  P+ VTY SL+N
Sbjct: 327 ALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLIN 386

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              ++G  D+A  + + ++  G  P  +TYN LL+     G  +    +L  M     SP
Sbjct: 387 GFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSP 446

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V +Y+ +I G C+Y  +DRA     +MV K   PD +TY++++  LC++  LNEA  L 
Sbjct: 447 DVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLF 506

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +   S  P   TY +LI+G  K+G + +A+ L+ +M++ G  PD +T+  LI G  + 
Sbjct: 507 QEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQ 566

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIH---------------GLCKSKKVDMAIQVL 525
            +  EA  LL ++    +      Y  +I                G C    ++ A QV 
Sbjct: 567 ARTREAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVF 626

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           E MI    KP++ V++ I+     DG   +A+KL+++++++       T++A
Sbjct: 627 ESMIKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIA 678



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 212/404 (52%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A KV + M+ SG   +  +YN+++ G C  G +   +   +EM  + C P+V+TYNT++ 
Sbjct: 187 AEKVYREMIASGVSLNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIG 246

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                 +  +A    +    +G  P L+TY ++I  +C+   I     VL +M  +G +P
Sbjct: 247 AYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAP 306

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D VTYN+LVN  CK G +  A+++ + +L  G+ P+ +TY +L++++   G  +   +  
Sbjct: 307 DGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFF 366

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           D M+     P   TY  LING  + G +D A   +++M+     P IVTYN +L   C  
Sbjct: 367 DQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVS 426

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G + EA+ LL  + G   SP +++Y+T+I G  +   +++A  +  +M+E G+SPD IT+
Sbjct: 427 GRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITY 486

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +LI G C   ++ EA DL +E+  +        Y  +I+G CK   ++ A+ + + MI 
Sbjct: 487 SSLIQGLCEQRRLNEACDLFQEMLNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIK 546

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             + PD   ++ ++  +     T EA +L  KL   +    G T
Sbjct: 547 KGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGIT 590



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 224/476 (47%), Gaps = 63/476 (13%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C   ++ +A KL+  M      P+      +I GL R+ RIE+ S VL  M
Sbjct: 240 TYNTVIGAYCKLKRIDEAFKLLRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEM 299

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD +TYN +V G CK G    A+ L  EM  +G  PDV+TY +++ TM   G  
Sbjct: 300 DRKGFAPDGVTYNTLVNGYCKVGNFHQALVLHSEMLRNGLPPDVVTYTSLINTMCKAGNL 359

Query: 239 KQAIGF-----------------------------------WKDQLRKGCPPYLITYTIL 263
            +A+ F                                   W + +R G PP ++TY  L
Sbjct: 360 NRAMEFFDQMHVRGLRPNGVTYTSLINGFSQKGFMDEAYRIWDEMIRSGFPPTIVTYNAL 419

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           +   C    +  AI +L  M  +G SPD+V+Y++++   C+  + D A  +   ++ +G+
Sbjct: 420 LNGHCVSGRMEEAIGLLRGMEGKGLSPDVVSYSTIIAGFCRYQELDRAFQMNAEMVEKGV 479

Query: 324 EPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            P++ITY++L+  L   R   +A D   +++N+ S  P  FTY  LING CK G ++ A+
Sbjct: 480 SPDAITYSSLIQGLCEQRRLNEACDLFQEMLNK-SLLPDEFTYTSLINGYCKEGDLNEAL 538

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           N  ++M+ K   PD VTYN ++  L K+    EA +LL  L      P  ITY+TLI+  
Sbjct: 539 NLHDEMIKKGFLPDTVTYNVLINGLNKQARTREAKRLLLKLFYDESIPNGITYDTLIE-- 596

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRT---LIWGFCRADQVEEAVDLLKEIGKRGNK 499
                                S  DI  ++   LI GFC    + EA  + + + KR  K
Sbjct: 597 ---------------------SCSDIEFKSVVALIKGFCMKGLMNEADQVFESMIKRNQK 635

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
              + Y ++IHG C+   V  A ++ + M+   + P       +VK +  +GM E+
Sbjct: 636 PNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKALYSEGMDEQ 691



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 110/427 (25%), Positives = 201/427 (47%), Gaps = 18/427 (4%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           E ++L  N  + GL    +  + S  L   D      D  T N ++  +C  G    A  
Sbjct: 270 EPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCKVGNFHQALV 329

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L   M R    PD     +LI  + +   + +A +    M + G  P+ +TY  ++ G  
Sbjct: 330 LHSEMLRNGLPPDVVTYTSLINTMCKAGNLNRAMEFFDQMHVRGLRPNGVTYTSLINGFS 389

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           ++G +  A  + DEM  SG  P ++TYN +L     +G+ ++AIG  +    KG  P ++
Sbjct: 390 QKGFMDEAYRIWDEMIRSGFPPTIVTYNALLNGHCVSGRMEEAIGLLRGMEGKGLSPDVV 449

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           +Y+ +I   C+   + RA ++  +M  +G SPD +TY+SL+   C+Q + ++A  +   +
Sbjct: 450 SYSTIIAGFCRYQELDRAFQMNAEMVEKGVSPDAITYSSLIQGLCEQRRLNEACDLFQEM 509

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L++ + P+  TY +L++     G  +    + D M +    P   TYN+LINGL K    
Sbjct: 510 LNKSLLPDEFTYTSLINGYCKEGDLNEALNLHDEMIKKGFLPDTVTYNVLINGLNKQART 569

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGA---------------LCKEGMLNEALQLLHLL 423
             A     ++      P+ +TY+T++ +                C +G++NEA Q+   +
Sbjct: 570 REAKRLLLKLFYDESIPNGITYDTLIESCSDIEFKSVVALIKGFCMKGLMNEADQVFESM 629

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
              +  P    YN +I G  + G + KA  LY +M++ G  P  +T   L+     ++ +
Sbjct: 630 IKRNQKPNEAVYNVIIHGHCRDGNVHKAHKLYKEMVDFGFIPHTVTIIALVKAL-YSEGM 688

Query: 484 EEAVDLL 490
           +E ++L+
Sbjct: 689 DEQLNLV 695



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 98/195 (50%), Gaps = 4/195 (2%)

Query: 373 CKY-GLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL--CKEGMLNEALQLLHLLNGSSCS 429
           C Y   +++A+N  +        P +++YN +L ++  C++ ++  A ++   +  S  S
Sbjct: 142 CSYLNFIEKALNIVDLAKLNGFMPGVLSYNAILDSIVRCRKPVI-FAEKVYREMIASGVS 200

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
             + +YN LI G    G +E  +  + +M  N   P+ +T+ T+I  +C+  +++EA  L
Sbjct: 201 LNVFSYNILIRGFCAAGNLEMGLRFFEEMERNRCLPNVVTYNTVIGAYCKLKRIDEAFKL 260

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L+ +G  G +     Y +VI+GLC+  +++    VL  M    + PD   ++T+V     
Sbjct: 261 LRSMGLEGLEPNLLTYNMVINGLCRVGRIEETSGVLAEMDRKGFAPDGVTYNTLVNGYCK 320

Query: 550 DGMTEEAYKLWQKLI 564
            G   +A  L  +++
Sbjct: 321 VGNFHQALVLHSEML 335


>gi|302780401|ref|XP_002971975.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
 gi|300160274|gb|EFJ26892.1| hypothetical protein SELMODRAFT_96626 [Selaginella moellendorffii]
          Length = 755

 Score =  259 bits (662), Expect = 3e-66,   Method: Compositional matrix adjust.
 Identities = 138/444 (31%), Positives = 244/444 (54%), Gaps = 2/444 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G+L +A KL + M   +  PD      L+ GL + DR+++A +VL+ M    
Sbjct: 307 LIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRN 366

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ ITY+ ++ GLCK GQ+R A  +   M V G EP+V+TYN+++           A+
Sbjct: 367 CTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSAL 426

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++    GC P +ITY  LI+ +CK      A  +  DM  + C+PD++TY+ L+   
Sbjct: 427 LLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGF 486

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK  + D A  + +++L + + P+ +T++TL+    + G  D  +++L+ M  +  SP V
Sbjct: 487 CKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDV 546

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TY  L++G CK G +  A     +M  + CQP++VTY  ++ A C+ G    A +LL  
Sbjct: 547 YTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEE 606

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGISPDDITHRTLIWGFCRAD 481
           + G+   P +ITY +LI G    G +E+A  +  ++  +     D   +R ++ G CR  
Sbjct: 607 MVGNGVQPNVITYRSLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTG 666

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM-ISSRYKPDDTVF 540
           ++  A++LL+ I + G   R+  Y  +I GLC+ K++  A++VLE M +S + +P+   +
Sbjct: 667 RMSAALELLEAIKQSGTPPRHDIYVALIRGLCQGKELGKAMEVLEEMTLSRKSRPNAEAY 726

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
             +++++A +G  EEA  L  +L+
Sbjct: 727 EAVIQELAREGRHEEANALADELL 750



 Score =  256 bits (654), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 242/445 (54%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC + K+  A KL   M     +P+      L+ GL R   +++A ++L  M
Sbjct: 198 TYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEM 257

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD  +Y+ ++ GLCK G+I  A+ + ++ S   C PDV+ Y+T++  +   G+ 
Sbjct: 258 RERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRL 317

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   ++      C P ++T+T L++ +CK   +  A +VL+ M    C+P+++TY+SL
Sbjct: 318 DEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSL 377

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G+  DA  V   ++ RG+EPN +TYN+L+H        D+   +++ M     
Sbjct: 378 IDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGC 437

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TYN LI+GLCK G    A   F  M +K C PD++TY+ ++G  CK   ++ A  
Sbjct: 438 LPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMART 497

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +   +  P ++T++TL++G    G ++ A  L  +M+ +  SPD  T+ +L+ GFC
Sbjct: 498 LFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFC 557

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  ++ EA  +LK + KRG +     Y  +I   C++ K  +A ++LE M+ +  +P+  
Sbjct: 558 KVGRMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVI 617

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            + +++      G  EEA K+ ++L
Sbjct: 618 TYRSLIGGFCGTGDLEEARKILERL 642



 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 230/449 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++  FC   K+  A  L+  M      P+      +I G  R  +++ A K+ 
Sbjct: 160 NEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLF 219

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV +G +P+ +TYN ++ GLC+ G +  A  LLDEM   G +PD  +Y+T++  +   
Sbjct: 220 RQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKT 279

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+  ++D     CPP ++ Y+ LI  +CK   +  A ++ + M    C PD+VT+
Sbjct: 280 GKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTF 339

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++  CK  +  +A  V+  +  R   PN ITY++L+  L   G      ++   M  
Sbjct: 340 TALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIV 399

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V TYN LI+G C    VD A+    +M +  C PDI+TYNT++  LCK G   E
Sbjct: 400 RGIEPNVVTYNSLIHGFCMTNGVDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPE 459

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +    C+P +ITY+ LI G  K   ++ A  L+  M++  + PD +T  TL+ 
Sbjct: 460 ANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVE 519

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+C A  V++A  LL+E+           Y  ++ G CK  ++  A +VL+ M     +P
Sbjct: 520 GYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVGRMVEARRVLKRMAKRGCQP 579

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +   ++ ++      G    AY+L ++++
Sbjct: 580 NVVTYTALIDAFCRAGKPTVAYRLLEEMV 608



 Score =  244 bits (623), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 236/441 (53%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C   +L +A+     M ++  +P+      LI G  ++ ++ +A  +L+ M  SG
Sbjct: 132 MIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESG 191

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TY+ ++ G C++ ++ +A  L  +M  +GC P+++TYNT+L  +  NG   +A 
Sbjct: 192 LAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAY 251

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               +   +G  P   +Y  L+  +CK   I  A++V +D +   C PD+V Y++L+   
Sbjct: 252 ELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGL 311

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G+ D+A  +   +     EP+ +T+  L+  L          ++L+ M + + +P V
Sbjct: 312 CKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNV 371

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ LI+GLCK G V  A   F +M+ +  +P++VTYN+++   C    ++ AL L+  
Sbjct: 372 ITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNGVDSALLLMEE 431

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  + C P +ITYNTLIDGL K G   +A  L+G M     +PD IT+  LI GFC+ ++
Sbjct: 432 MTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLER 491

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++ A  L  ++ K+        +  ++ G C +  VD A ++LE M++S   PD   +++
Sbjct: 492 IDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTS 551

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           +V      G   EA ++ +++
Sbjct: 552 LVDGFCKVGRMVEARRVLKRM 572



 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/403 (32%), Positives = 220/403 (54%), Gaps = 3/403 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+GL +   ++KA ++L+ M  SG VPD   YN ++  LCK    R+    LD      
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCK---ARNTAKALDYFRSME 121

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           CE +VIT+  ++  +    +  +A  ++    +KG  P   TY +LI   CK   + RA 
Sbjct: 122 CEKNVITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L +M   G +P++VTY+++++  C+Q K D A  +   ++  G  PN +TYNTLL  L
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D   ++LD M E    P  F+Y+ L+ GLCK G +D A+  F    + +C PD+
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V Y+T++  LCK G L+EA +L   +  +SC P ++T+  L+DGL K   +++A  +   
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M +   +P+ IT+ +LI G C+  QV +A ++ K +  RG +     Y  +IHG C +  
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           VD A+ ++E M ++   PD   ++T++  +   G   EA +L+
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLF 464



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 236/477 (49%), Gaps = 38/477 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++Q  C  G L  A +L++ M     +PD      +I  L +     KA    + M    
Sbjct: 65  VIQGLCKSGDLDKACELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEK 124

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V   IT+ +M+ GLCK  ++  A     +M   G  P+  TYN ++       K  +A 
Sbjct: 125 NV---ITWTIMIDGLCKANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAY 181

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              K+    G  P ++TY+ +I   C+Q  +  A ++   M   GC P++VTYN+L++  
Sbjct: 182 LLLKEMKESGLAPNVVTYSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGL 241

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G  D+A  +++ +  RG++P+  +Y+TL+  L   G  D   K+ +  +     P V
Sbjct: 242 CRNGLMDEAYELLDEMRERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDV 301

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y+ LI GLCK G +D A   F +M   +C+PD+VT+  ++  LCK   L EA Q+L  
Sbjct: 302 VAYSTLIAGLCKAGRLDEACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLET 361

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +   +C+P +ITY++LIDGL K G +  A  ++ +M+  GI P+ +T+ +LI GFC  + 
Sbjct: 362 MEDRNCTPNVITYSSLIDGLCKTGQVRDAQEVFKRMIVRGIEPNVVTYNSLIHGFCMTNG 421

Query: 483 VEEAVDLLKEIGKRG------------------------NKMRNS-----------AYRL 507
           V+ A+ L++E+   G                        N++               Y  
Sbjct: 422 VDSALLLMEEMTATGCLPDIITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSC 481

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +I G CK +++DMA  + + M+     PD   FST+V+   + G+ ++A +L ++++
Sbjct: 482 LIGGFCKLERIDMARTLFDDMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMV 538



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 98/380 (25%), Positives = 180/380 (47%), Gaps = 32/380 (8%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G + +V TYN +   +    +  +     K+    G  P + TY ++I+ +CK   + +A
Sbjct: 19  GFDHNVYTYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKA 78

Query: 277 IEVLDDMAIEGCSPD--------------------------------IVTYNSLVNFSCK 304
            E+L++M   G  PD                                ++T+  +++  CK
Sbjct: 79  CELLEEMRESGPVPDAAIYNFVIHALCKARNTAKALDYFRSMECEKNVITWTIMIDGLCK 138

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             +  +A      +  +G  PN  TYN L++             +L  M E+  +P V T
Sbjct: 139 ANRLPEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVT 198

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y+ +I+G C+   VD A   F QMV   C P++VTYNT+L  LC+ G+++EA +LL  + 
Sbjct: 199 YSTVIHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMR 258

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P   +Y+TL+ GL K G ++ A+ ++         PD + + TLI G C+A +++
Sbjct: 259 ERGLQPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLD 318

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  L +++ +   +     +  ++ GLCK  ++  A QVLE M      P+   +S+++
Sbjct: 319 EACKLFEKMRENSCEPDVVTFTALMDGLCKGDRLQEAQQVLETMEDRNCTPNVITYSSLI 378

Query: 545 KKVADDGMTEEAYKLWQKLI 564
             +   G   +A ++++++I
Sbjct: 379 DGLCKTGQVRDAQEVFKRMI 398



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/307 (30%), Positives = 160/307 (52%), Gaps = 3/307 (0%)

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY  L E + +   I     +L +    G +P++ TY  ++   CK G  D A  ++  +
Sbjct: 26  TYNRLFEALLRARRIDETCHILKNGWPPGITPNVFTYAVVIQGLCKSGDLDKACELLEEM 85

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G  P++  YN ++H+L          K LD          V T+ I+I+GLCK   +
Sbjct: 86  RESGPVPDAAIYNFVIHALCK---ARNTAKALDYFRSMECEKNVITWTIMIDGLCKANRL 142

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A   F +M  K   P+  TYN ++   CK   ++ A  LL  +  S  +P ++TY+T+
Sbjct: 143 PEATTYFAKMKKKGTVPNEWTYNVLINGFCKVHKVHRAYLLLKEMKESGLAPNVVTYSTV 202

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I G  ++  ++ A  L+ QM+ENG  P+ +T+ TL+ G CR   ++EA +LL E+ +RG 
Sbjct: 203 IHGFCRQTKVDTAYKLFRQMVENGCMPNLVTYNTLLSGLCRNGLMDEAYELLDEMRERGL 262

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +    +Y  ++ GLCK+ K+DMA++V E   +    PD   +ST++  +   G  +EA K
Sbjct: 263 QPDKFSYDTLMAGLCKTGKIDMALKVFEDNSNGDCPPDVVAYSTLIAGLCKAGRLDEACK 322

Query: 559 LWQKLIE 565
           L++K+ E
Sbjct: 323 LFEKMRE 329



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/347 (23%), Positives = 148/347 (42%), Gaps = 39/347 (11%)

Query: 84  VLAVNKKLRGLTITKKSHDPSLPSSD--GPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           ++  N  + GL  T ++ + +    D    F   D  T + ++  FC   ++  A  L D
Sbjct: 441 IITYNTLIDGLCKTGRAPEANRLFGDMKAKFCNPDVITYSCLIGGFCKLERIDMARTLFD 500

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            M ++  +PD      L+ G      ++ A ++L+ MV S   PD  TY  +V G CK G
Sbjct: 501 DMLKQAVLPDVVTFSTLVEGYCNAGLVDDAERLLEEMVASDCSPDVYTYTSLVDGFCKVG 560

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++  A  +L  M+  GC+P+V+TY  ++      GK   A    ++ +  G  P +ITY 
Sbjct: 561 RMVEARRVLKRMAKRGCQPNVVTYTALIDAFCRAGKPTVAYRLLEEMVGNGVQPNVITYR 620

Query: 262 ILIEQVCKQCGIARAIEVLDDMAI-EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            LI   C    +  A ++L+ +   E C  D+  Y  +++  C+ G+   A+        
Sbjct: 621 SLIGGFCGTGDLEEARKILERLERDENCKADMFAYRVMMDGLCRTGRMSAAL-------- 672

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
                                      ++L+ + ++   P    Y  LI GLC+   + +
Sbjct: 673 ---------------------------ELLEAIKQSGTPPRHDIYVALIRGLCQGKELGK 705

Query: 381 AINSFNQM-VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           A+    +M +S+  +P+   Y  V+  L +EG   EA  L   L G+
Sbjct: 706 AMEVLEEMTLSRKSRPNAEAYEAVIQELAREGRHEEANALADELLGN 752


>gi|302774715|ref|XP_002970774.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
 gi|300161485|gb|EFJ28100.1| hypothetical protein SELMODRAFT_94312 [Selaginella moellendorffii]
          Length = 497

 Score =  258 bits (658), Expect = 7e-66,   Method: Compositional matrix adjust.
 Identities = 152/458 (33%), Positives = 249/458 (54%), Gaps = 5/458 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   +   A +L + M      P       L+ GL R  ++E+A  + Q M
Sbjct: 12  TYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERAMALFQEM 71

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +     D I++N++V GLC+ G+I +A+    +M    C P+VITY+ ++  +    + 
Sbjct: 72  -LDRRSHDVISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVLIDGLCKANRV 129

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA+   +    +GC P +ITYTIL++ +CK+  +A A EVL +M   GC P++VTYNSL
Sbjct: 130 SQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSL 189

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEAS 357
           ++  C+  +  DA+ ++ ++  RG  PN +TY TL+  L   G   DA   + D++++  
Sbjct: 190 LHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGG 249

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +P +  YN+LINGLCK   VD +I    + VS   +PD+VTY++V+  LC+   L+EA 
Sbjct: 250 -TPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEAC 308

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL  +    C P +I Y+TLIDGL K G +++A  LY  M  +G   D +T+ TLI G 
Sbjct: 309 RLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGL 368

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+A +V+EA  LL  + + G       Y  +I GLC    +D AI+++E M  S   P  
Sbjct: 369 CKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSA 428

Query: 538 TVFSTIVKKVAD-DGMTEEAYKLWQKLIEWKVFEKGTT 574
             ++ ++  +   + +   A   +Q++I+  V     T
Sbjct: 429 VTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPDHIT 466



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 232/422 (54%), Gaps = 3/422 (0%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           +D  + N ++   C  GK+  A +    M  R   P+      LI GL + +R+ +A ++
Sbjct: 77  HDVISFNILVTGLCRAGKIETALEFFRKMDDRCS-PNVITYSVLIDGLCKANRVSQAVEL 135

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+ M   G  PD ITY ++V GLCK  ++ +A  +L EM  +GC P+++TYN++L  +  
Sbjct: 136 LESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPNLVTYNSLLHGLCR 195

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             +   A+   +D   +GC P ++TY  LI+ +CK   +  A  +L DM  +G +PD++ 
Sbjct: 196 ARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLADMIDKGGTPDLMI 255

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L+N  CK  + D+++ ++   +S G++P+ +TY+++++ L      D   ++L  + 
Sbjct: 256 YNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSNRLDEACRLLLYVK 315

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P V  Y+ LI+GLCK G VD A + +  M    C  D+VTY+T++  LCK G ++
Sbjct: 316 SRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYSTLIDGLCKAGRVD 375

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA  LL  +      P  +TYN+LI GL     +++A+ L  +M  +  +P  +T+  LI
Sbjct: 376 EAHLLLARMVRMGTPPSTMTYNSLIKGLCDLNHLDEAIELVEEMERSNCAPSAVTYNILI 435

Query: 475 WGFCRADQVEE-AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV-DMAIQVLELMISSR 532
            G CR ++V+  A+D  +E+   G    +  Y +++ GL KSK + ++   VL+ M+   
Sbjct: 436 HGMCRMERVDSAALDYFQEMIDNGVIPDHITYSILLEGLKKSKDLHELRHLVLDQMVQLG 495

Query: 533 YK 534
           Y+
Sbjct: 496 YR 497



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 211/385 (54%), Gaps = 2/385 (0%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P+ +TYN ++ GLCK  +   A  L + M    C P ++TYNT+L  +F  GK ++A
Sbjct: 5   GCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGKLERA 64

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +  +++ L +     +I++ IL+  +C+   I  A+E    M  + CSP+++TY+ L++ 
Sbjct: 65  MALFQEMLDRRSHD-VISFNILVTGLCRAGKIETALEFFRKMD-DRCSPNVITYSVLIDG 122

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK  +   AV ++ ++ +RG  P+ ITY  L+  L       A  ++L  M +A   P 
Sbjct: 123 LCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDAGCVPN 182

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + TYN L++GLC+   V  A+     M  + C P++VTY T++  LCK G + +A  +L 
Sbjct: 183 LVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDACAMLA 242

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +     +P L+ YN LI+GL K   +++++ L  + +  GI PD +T+ ++I+G CR++
Sbjct: 243 DMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGIKPDVVTYSSVIYGLCRSN 302

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +++EA  LL  +  RG       Y  +I GLCK+ KVD A  + E+M       D   +S
Sbjct: 303 RLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAFDLYEVMTGDGCDADVVTYS 362

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEW 566
           T++  +   G  +EA+ L  +++  
Sbjct: 363 TLIDGLCKAGRVDEAHLLLARMVRM 387



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 89/287 (31%), Positives = 160/287 (55%), Gaps = 4/287 (1%)

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   GC P++VTYNSL++  CK  + D A  +  ++ S    P+ +TYNTLL  L   G 
Sbjct: 1   MRDHGCEPNVVTYNSLIDGLCKNNEPDRAQELFEHMKSVECSPSMVTYNTLLDGLFRTGK 60

Query: 343 WD-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
            + A+    ++++  SH   V ++NIL+ GLC+ G ++ A+  F +M    C P+++TY+
Sbjct: 61  LERAMALFQEMLDRRSHD--VISFNILVTGLCRAGKIETALEFFRKM-DDRCSPNVITYS 117

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            ++  LCK   +++A++LL  +    CSP +ITY  L+DGL K+  +  A  +  +M++ 
Sbjct: 118 VLIDGLCKANRVSQAVELLESMKARGCSPDVITYTILVDGLCKESKVAAAWEVLREMLDA 177

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G  P+ +T+ +L+ G CRA +V +A+ L++++  RG       Y  +I GLCK  +V  A
Sbjct: 178 GCVPNLVTYNSLLHGLCRARRVSDALALMRDMTCRGCTPNVVTYGTLIDGLCKVGRVKDA 237

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +L  MI     PD  +++ ++  +      +E+  L ++ +   +
Sbjct: 238 CAMLADMIDKGGTPDLMIYNMLINGLCKADQVDESIALLRRAVSGGI 284



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 97/188 (51%), Gaps = 1/188 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T + ++   C   +L +A +L+  +  R   PD      LI GL +  ++++A 
Sbjct: 284 IKPDVVTYSSVIYGLCRSNRLDEACRLLLYVKSRGCPPDVILYSTLIDGLCKAGKVDEAF 343

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + ++M   G   D +TY+ ++ GLCK G++  A  LL  M   G  P  +TYN++++ +
Sbjct: 344 DLYEVMTGDGCDADVVTYSTLIDGLCKAGRVDEAHLLLARMVRMGTPPSTMTYNSLIKGL 403

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI-ARAIEVLDDMAIEGCSPD 291
            D     +AI   ++  R  C P  +TY ILI  +C+   + + A++   +M   G  PD
Sbjct: 404 CDLNHLDEAIELVEEMERSNCAPSAVTYNILIHGMCRMERVDSAALDYFQEMIDNGVIPD 463

Query: 292 IVTYNSLV 299
            +TY+ L+
Sbjct: 464 HITYSILL 471


>gi|302762673|ref|XP_002964758.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
 gi|300166991|gb|EFJ33596.1| hypothetical protein SELMODRAFT_82857 [Selaginella moellendorffii]
          Length = 552

 Score =  257 bits (656), Expect = 1e-65,   Method: Compositional matrix adjust.
 Identities = 137/414 (33%), Positives = 238/414 (57%), Gaps = 3/414 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I GL +  +++KA  + + MV     PD +TY  ++ GL K+ +++ A  L +E    G
Sbjct: 1   MIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKG 60

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKD-QLRKGCPPYLITYTILIEQVCKQCGIARA 276
           C P V+TYNT++  +   G+ + A+  + D  +  G  P ++TY+ LI+ +C+   + + 
Sbjct: 61  CHPTVVTYNTMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKG 120

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            ++L++MA  GC+P+ VTYN+LVN    QG+  +A  ++  + + G  P  IT+  ++  
Sbjct: 121 CKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKG 180

Query: 337 LGSRGCWDAVDKILD--IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           L   G  +A  +++D   M E+  SP V T+N +++GLCK   +  A N F + + + C+
Sbjct: 181 LCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCR 240

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P++VTY+T++  L K   ++EALQLL  +    C    +TY+T++DGL K G ME A+V+
Sbjct: 241 PNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVV 300

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             QM + G  PD +T+ TLI GF +  ++ EAV LL+E+ + G       Y  + HGLC+
Sbjct: 301 LRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCR 360

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           S + D A+++L+ M +    P+   +S+IV  +   G   EA   ++K+   +V
Sbjct: 361 SGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEV 414



 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/413 (32%), Positives = 224/413 (54%), Gaps = 4/413 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
            +I GL +  RIE A  +   M +  G  P  +TY+ ++ GLC+  ++     LL+EM+ 
Sbjct: 70  TMIDGLCKCGRIENALTLYDDMAIHFGFRPTVVTYSTLIDGLCRDHEVDKGCKLLEEMAG 129

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            GC P+ +TYNT++  +   G+ K+A    +     GCPP LIT+ ++I+ +CK+  I  
Sbjct: 130 RGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQMAANGCPPELITFGLIIKGLCKEGEIEA 189

Query: 276 AIEVLDDMAI--EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
           A  V+D+M +   G SPD++T+NS+++  CK+ +  DA  V    L RG  PN +TY+TL
Sbjct: 190 AFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTL 249

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L      D   ++L  M E        TY+ +++GL K G ++ A+    QM    C
Sbjct: 250 IDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGC 309

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD VTYNT++    K   L EA+ LL  +  +   P ++TY TL  GL + G  ++A+ 
Sbjct: 310 LPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVE 369

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGL 512
           +   M   G +P+ IT+ +++ G C+A +V EA+   +++ +      +  AY  +I GL
Sbjct: 370 ILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGL 429

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           CK+ K+D A + LE MI +   PD   FS ++  + D G  +   +L++ + E
Sbjct: 430 CKAGKIDEAYEFLERMIRAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAE 482



 Score =  242 bits (618), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 239/447 (53%), Gaps = 3/447 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C   ++    KL++ MA R   P+      L+  L+   R ++A  +L+ M
Sbjct: 103 TYSTLIDGLCRDHEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRSKEAFSLLEQM 162

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV--SGCEPDVITYNTILRTMFDNG 236
             +G  P+ IT+ +++ GLCK G+I +A  ++DEM +  SG  PDVIT+N++L  +    
Sbjct: 163 AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMFMIESGLSPDVITFNSVLDGLCKEQ 222

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +   A   +K  L +GC P ++TY+ LI+ + K   +  A+++L  M   GC  + VTY+
Sbjct: 223 RILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYS 282

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           ++V+   K G+ +DAV+V+  +   G  P+++TYNTL+     R        +L  M EA
Sbjct: 283 TVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEA 342

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P+V TY  L +GLC+ G  D A+   + M ++ C P+ +TY++++  LCK G + EA
Sbjct: 343 GFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEA 402

Query: 417 LQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           L     +      +P +I Y+ LIDGL K G +++A     +M+  G  PD +T   LI 
Sbjct: 403 LGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMIRAGRIPDVVTFSILIN 462

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C A +++  ++L + + +RG       Y  ++  LC++ +VD A  + + M S    P
Sbjct: 463 GLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLFQQMRSDGLSP 522

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQK 562
           D +   T++  + +    E+A ++  +
Sbjct: 523 DRSTRRTMIHGLLEVNRDEDAKRIQDE 549



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 108/328 (32%), Positives = 175/328 (53%), Gaps = 1/328 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C   ++ DA  +      R   P+      LI GL ++ ++++A ++L
Sbjct: 207 DVITFNSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLL 266

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G   +T+TY+ +V GL K G++  A+ +L +M  +GC PD +TYNT++   F  
Sbjct: 267 AKMVELGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKR 326

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + ++A+G  ++ L  G  P ++TYT L   +C+      A+E+LD MA  GC+P+ +TY
Sbjct: 327 QRLREAVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITY 386

Query: 296 NSLVNFSCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +S+V+  CK G+  +A+     +     + P+ I Y+ L+  L   G  D   + L+ M 
Sbjct: 387 SSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGKIDEAYEFLERMI 446

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            A   P V T++ILINGLC  G +D  +  F  M  + C PD+VTY T++  LC+   ++
Sbjct: 447 RAGRIPDVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVD 506

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGL 442
           EA  L   +     SP   T  T+I GL
Sbjct: 507 EAFDLFQQMRSDGLSPDRSTRRTMIHGL 534



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 27/97 (27%), Positives = 43/97 (44%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++   C  G++    +L   MA R  +PD      L+  L R  R+++A  + 
Sbjct: 453 DVVTFSILINGLCDAGRIDTGLELFRGMAERGCVPDMVTYATLVDRLCRASRVDEAFDLF 512

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
           Q M   G  PD  T   M+ GL +  +   A  + DE
Sbjct: 513 QQMRSDGLSPDRSTRRTMIHGLLEVNRDEDAKRIQDE 549


>gi|413933767|gb|AFW68318.1| hypothetical protein ZEAMMB73_786057 [Zea mays]
          Length = 645

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 241/457 (52%), Gaps = 1/457 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  +  T   +++  C+RG++ DA  ++D MARR   P        +    R      A 
Sbjct: 107 VAPNAYTYFPLVRALCARGRIADALAVLDDMARRGCAPTPPMYHVTLEAACRASGFRGAV 166

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRT 231
            VL+ +   G   D    N+++  +C +G +  A+ LL ++  S GCEPDV++YN +LR 
Sbjct: 167 GVLRDLHGRGCALDVGNCNLVLQAVCDQGPVDEAVRLLRDLLPSFGCEPDVVSYNAVLRG 226

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +    ++       ++ +  GCPP ++T++ LI  +C+     R  EV   MA  GC+PD
Sbjct: 227 LCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHEVHAQMAEHGCAPD 286

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +  Y ++++  CK+ + + A  ++N + S G+ PN + YNTLL  L S   W+  + +L 
Sbjct: 287 VRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLCSADRWEEAEGLLA 346

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M +        T+NIL++ LC+ GLVDR I    QM+   C PD++TY TV+   CKEG
Sbjct: 347 EMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVITYTTVINGFCKEG 406

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           +++EA+ LL  +    C P  ++Y  ++ GL        A  L  QM++ G  P+ +T  
Sbjct: 407 LIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQMIQQGCPPNPVTFN 466

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           TLI   C+   VE+A++LLK++   G      +Y  VI GL K+   D A+++L +M+  
Sbjct: 467 TLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNTDEALELLNVMVKK 526

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              P+  ++S+I   ++ +G   +  ++++ + +  V
Sbjct: 527 GMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTV 563



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 217/417 (52%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  + N +L+  C   +      L++ M      P+      LI  L R    E+  +
Sbjct: 214 EPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFERVHE 273

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V   M   G  PD   Y  ++ G+CK  ++  A  +L+ M   G  P+V+ YNT+L+ + 
Sbjct: 274 VHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLKGLC 333

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              ++++A G   +   K CP   +T+ IL++ +C+   + R IEVL+ M   GC PD++
Sbjct: 334 SADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMPDVI 393

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +++N  CK+G  D+AV+++ ++ + G  PN+++Y  +L  L S   W   ++++  M
Sbjct: 394 TYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELMSQM 453

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P   T+N LIN LCK GLV++AI    QM+   C PD+++Y+TV+  L K G  
Sbjct: 454 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGNT 513

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +EAL+LL+++     SP  I Y+++   L+ +G + K + ++  + +  +  D + +  +
Sbjct: 514 DEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLYNAV 573

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           I   C+  + + A++ L  +   G     S Y ++I GL     V  A ++L  + S
Sbjct: 574 ISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCS 630



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 203/411 (49%), Gaps = 39/411 (9%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           YN MV G C+ GQ+ +A  L   + V+   P+  TY  ++R +   G+   A+    D  
Sbjct: 82  YNAMVAGYCRAGQLAAARRLAASVPVA---PNAYTYFPLVRALCARGRIADALAVLDDMA 138

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R+GC P    Y + +E  C+  G   A+ VL D+   GC+ D+   N ++   C QG  D
Sbjct: 139 RRGCAPTPPMYHVTLEAACRASGFRGAVGVLRDLHGRGCALDVGNCNLVLQAVCDQGPVD 198

Query: 310 DAVLVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           +AV ++ +LL S G EP+ ++YN +L  L     W  V  +++ M  A   P + T++ L
Sbjct: 199 EAVRLLRDLLPSFGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTL 258

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I  LC+ GL +R      QM    C PD+  Y T++  +CKE  L  A  +L+ +     
Sbjct: 259 IGHLCRNGLFERVHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGL 318

Query: 429 SPCLITYNTLIDG-----------------------------------LAKKGCMEKAMV 453
           SP ++ YNTL+ G                                   L + G +++ + 
Sbjct: 319 SPNVVCYNTLLKGLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIE 378

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +  QM+E+G  PD IT+ T+I GFC+   ++EAV LL+ +   G +    +Y +V+ GLC
Sbjct: 379 VLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLC 438

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            +++   A +++  MI     P+   F+T++  +   G+ E+A +L ++++
Sbjct: 439 SAERWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQML 489



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/422 (28%), Positives = 209/422 (49%), Gaps = 2/422 (0%)

Query: 78  WSSESHVLAVNKKLRGLTITKK-SHDPSLPSS-DGPFVENDEKTNNKILQNFCSRGKLTD 135
           +  E  V++ N  LRGL + ++  H   L           +  T + ++ + C  G    
Sbjct: 211 FGCEPDVVSYNAVLRGLCMARRWGHVQDLMEEMVAAGCPPNIVTFSTLIGHLCRNGLFER 270

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
             ++   MA     PD      +I G+ + +R+E A  +L  M   G  P+ + YN ++ 
Sbjct: 271 VHEVHAQMAEHGCAPDVRMYATIIDGVCKEERLEVARGILNRMPSYGLSPNVVCYNTLLK 330

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
           GLC   +   A  LL EM    C  D +T+N ++  +  NG   + I   +  L  GC P
Sbjct: 331 GLCSADRWEEAEGLLAEMFDKDCPLDDVTFNILVDFLCQNGLVDRVIEVLEQMLEHGCMP 390

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            +ITYT +I   CK+  I  A+ +L  MA  GC P+ V+Y  ++   C   ++ DA  ++
Sbjct: 391 DVITYTTVINGFCKEGLIDEAVMLLRSMAACGCRPNTVSYTIVLKGLCSAERWVDAEELM 450

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           + ++ +G  PN +T+NTL++ L  +G  +   ++L  M     SP + +Y+ +I+GL K 
Sbjct: 451 SQMIQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKA 510

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G  D A+   N MV K   P+ + Y+++  AL  EG +N+ +Q+   +  ++     + Y
Sbjct: 511 GNTDEALELLNVMVKKGMSPNTIIYSSIASALSGEGRINKVIQMFENIQDTTVRSDAVLY 570

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           N +I  L K+G  ++A+     M+ +G  P++ T+  LI G      V+EA ++L E+  
Sbjct: 571 NAVISSLCKRGETDRAIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEILTELCS 630

Query: 496 RG 497
           +G
Sbjct: 631 KG 632


>gi|302780485|ref|XP_002972017.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
 gi|300160316|gb|EFJ26934.1| hypothetical protein SELMODRAFT_96794 [Selaginella moellendorffii]
          Length = 1116

 Score =  256 bits (653), Expect = 3e-65,   Method: Compositional matrix adjust.
 Identities = 154/515 (29%), Positives = 260/515 (50%), Gaps = 71/515 (13%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + C  G L +A +L   M+ R+ +P+      LI GL ++ RI++A +++
Sbjct: 250 DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELI 309

Query: 176 QIM------------------------------------VMSGGV---PDTITYNMMVGG 196
           Q M                                    +  G +   PDT+T++ ++ G
Sbjct: 310 QEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDG 369

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           LCK GQI  A ++ D+M   G  P+VITYN ++  +    K ++A    +  + KG  P 
Sbjct: 370 LCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPD 429

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           +ITY++L++  CK   +  A+E+L  MA  GC+P++VT+NS+++  CK  +  +A  + +
Sbjct: 430 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFD 489

Query: 317 NL-LSRGMEPNSITYNTLLHSLGSRG----------------------CWDAVDKILDI- 352
           ++ L  G+ P+ ITY TL+  L   G                      C + + K+ D+ 
Sbjct: 490 DMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGLSKLGDVS 549

Query: 353 --------MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
                   M E    P   T+NILI G CK G  ++A   F +MV+KN QPD++T+  ++
Sbjct: 550 RALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALI 609

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LCK G +  A  +L L+      P ++TYN L+ GL K G +E+A     +M+ +G  
Sbjct: 610 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCV 669

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD IT+ +L++  CRA + ++A+ L+ E+   G       Y +++ GL KS + + AI V
Sbjct: 670 PDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITV 729

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           LE M+   + PD   ++T++  +   G  EEA +L
Sbjct: 730 LEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRL 764



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 143/450 (31%), Positives = 247/450 (54%), Gaps = 12/450 (2%)

Query: 126 NFCSRG--KLTDASKLIDIMARRNQ---IPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N C  G  KL D S+ + +  R  +   +PD      LI G  +    E+AS + + MV 
Sbjct: 536 NCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVA 595

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PD +T+  ++ GLCK GQ+ +A  +LD M   G  P+V+TYN ++  +  +G+ ++
Sbjct: 596 KNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEE 655

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A  F ++ +  GC P  ITY  L+  +C+      A++++ ++   G  PD VTYN LV+
Sbjct: 656 ACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVD 715

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL-DIMNEASHS 359
              K G+ + A+ V+  ++ +G  P+ +TYNTL+ SL   G  +   ++  D+ +  S  
Sbjct: 716 GLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRC 775

Query: 360 --PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ--PDIVTYNTVLGALCKEGMLNE 415
             P V TY++LINGLCK G +D A     +M+ K+C   P+I+TYN+ L  LCK+ M+ E
Sbjct: 776 CVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAE 835

Query: 416 ALQLLHLLNGSS--CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           A +L+  L   S   SP  +T++TLIDGL K G  ++A  ++  M+  G  P+ +T+  L
Sbjct: 836 ACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVL 895

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           + G C+ D++E A  +++ +  +G       Y +++   CK+  VD A+++L  M S   
Sbjct: 896 MNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGC 955

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            P+   F++I+  +     + EA++++  +
Sbjct: 956 TPNVVTFNSIIDGLCKSDQSGEAFQMFDDM 985



 Score =  241 bits (614), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 145/477 (30%), Positives = 249/477 (52%), Gaps = 36/477 (7%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N ++   C  G++ +A + ++ M     +PD     +L+  L R  R + A +++  +
Sbjct: 639  TYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSEL 698

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
               G  PDT+TYN++V GL K GQ   AI +L+EM   G  PDV+TYNT++ ++   G  
Sbjct: 699  KSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDL 758

Query: 239  KQAIGFWKD---QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS--PDIV 293
            ++A     D   ++ + C P ++TY++LI  +CK   I  A E++ +M  + C   P+I+
Sbjct: 759  EEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNII 818

Query: 294  TYNSLVNFSCKQGKYDDAVLVINNLL--SRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            TYNS ++  CKQ    +A  ++ +L   S  + P+++T++TL+  L   G  D    + D
Sbjct: 819  TYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFD 878

Query: 352  IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
             M    + P V TYN+L+NGLCK   ++RA      MV K   PD++TY+ ++ A CK  
Sbjct: 879  DMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKAS 938

Query: 412  MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGISPDDITH 470
             ++EAL+LLH +    C+P ++T+N++IDGL K     +A  ++  M +++G++PD IT+
Sbjct: 939  HVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITY 998

Query: 471  RTLIWGFCR---ADQVEEAVDLLKE------------IGKRGNKMR-------------N 502
             TLI G  R   A Q E  +D + +            + K G+  R              
Sbjct: 999  CTLIDGLFRTGWAGQAEVLLDAMPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDK 1058

Query: 503  SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
              + ++I G CK+   + A  + E M++   +PD   F  ++  +   G  E  + +
Sbjct: 1059 VTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDI 1115



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 145/456 (31%), Positives = 235/456 (51%), Gaps = 8/456 (1%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D+ T N ++   C  G    AS L + M  +N  PD      LI GL +  ++E A  +L
Sbjct: 566  DKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDIL 625

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +M   G  P+ +TYN +V GLCK G+I  A   L+EM  SGC PD ITY +++  +   
Sbjct: 626  DLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRA 685

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
             +   A+    +    G  P  +TY IL++ + K     +AI VL++M  +G  PD+VTY
Sbjct: 686  SRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTY 745

Query: 296  NSLVNFSCKQGKYDDAVLV---INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            N+L++  CK G  ++A  +   +++ +SR   PN +TY+ L++ L   G  D   +++  
Sbjct: 746  NTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQE 805

Query: 353  MNEASHS--PTVFTYNILINGLCKYGLVDRAINSFNQMV--SKNCQPDIVTYNTVLGALC 408
            M   S    P + TYN  ++GLCK  ++  A      +   S    PD VT++T++  LC
Sbjct: 806  MMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 865

Query: 409  KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
            K G  +EA  +   +      P ++TYN L++GL K   ME+A  +   M++ G++PD I
Sbjct: 866  KCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGVTPDVI 925

Query: 469  THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            T+  L+  FC+A  V+EA++LL  +  RG       +  +I GLCKS +   A Q+ + M
Sbjct: 926  TYSVLVDAFCKASHVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDQSGEAFQMFDDM 985

Query: 529  -ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             +     PD   + T++  +   G   +A  L   +
Sbjct: 986  TLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDAM 1021



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 158/542 (29%), Positives = 269/542 (49%), Gaps = 45/542 (8%)

Query: 67  IDRVNEVDQDEWSSESHVL----AVNKKLRGL---TITKKSHDPSLPSSDGPF-VENDEK 118
           ID   E+ Q+       VL      N  L GL   ++T ++ +      DG   V  D  
Sbjct: 302 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 361

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C  G++ +A  + D M     +P+      L+ GL + D++E+A  +++ M
Sbjct: 362 TFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESM 421

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD ITY+++V   CK  ++  A+ LL  M+  GC P+V+T+N+I+  +  + + 
Sbjct: 422 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 481

Query: 239 KQAIGFWKD-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA----------IEG 287
            +A   + D  L+ G  P  ITY  LI+ + +     +A  +LD M           I G
Sbjct: 482 GEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCING 541

Query: 288 CS---------------------PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
            S                     PD VT+N L+  +CK G ++ A  +   ++++ ++P+
Sbjct: 542 LSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPD 601

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
            +T+  L+  L   G  +A   ILD+M      P V TYN L++GLCK G ++ A     
Sbjct: 602 VMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLE 661

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +MVS  C PD +TY +++ ALC+    ++ALQL+  L      P  +TYN L+DGL K G
Sbjct: 662 EMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSG 721

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM---RNS 503
             E+A+ +  +M+  G  PD +T+ TLI   C+A  +EEA  L  ++  R ++       
Sbjct: 722 QTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRVSRCCVPNVV 781

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMI--SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            Y ++I+GLCK  ++D A ++++ M+  S    P+   +++ +  +    M  EA +L +
Sbjct: 782 TYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMR 841

Query: 562 KL 563
            L
Sbjct: 842 SL 843



 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 140/460 (30%), Positives = 240/460 (52%), Gaps = 16/460 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMA-RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N I+   C   +  +A ++ D MA +   +PD      LI GL R  R  +A  +L  
Sbjct: 467 TFNSIIDGLCKSDRSGEAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDA 526

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M      PDT  +N  + GL K G +  A+ + + M      PD +T+N ++      G 
Sbjct: 527 M----PDPDTYAFNCCINGLSKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGN 582

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F+QA   +++ + K   P ++T+  LI+ +CK   +  A ++LD M   G  P++VTYN+
Sbjct: 583 FEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNA 642

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           LV+  CK G+ ++A   +  ++S G  P+SITY +L+++L      D   +++  +    
Sbjct: 643 LVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFG 702

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TYNIL++GL K G  ++AI    +MV K   PD+VTYNT++ +LCK G L EA 
Sbjct: 703 WDPDTVTYNILVDGLWKSGQTEQAITVLEEMVGKGHHPDVVTYNTLIDSLCKAGDLEEAR 762

Query: 418 QLLHLLN---GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG--ISPDDITHRT 472
           +L   ++      C P ++TY+ LI+GL K G +++A  L  +MM     + P+ IT+ +
Sbjct: 763 RLHGDMSSRVSRCCVPNVVTYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNS 822

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNS----AYRLVIHGLCKSKKVDMAIQVLELM 528
            + G C+   + EA +L++ +  R   +R S     +  +I GLCK  + D A  V + M
Sbjct: 823 FLDGLCKQSMMAEACELMRSL--RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDM 880

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           I+  Y P+   ++ ++  +      E A+ + + +++  V
Sbjct: 881 IAGGYVPNVVTYNVLMNGLCKTDKMERAHAMIESMVDKGV 920



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/407 (31%), Positives = 219/407 (53%), Gaps = 13/407 (3%)

Query: 167 RIEKASKVLQI----MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
           R  + ++ L+I    M   G  P  +TYN ++ GLCK  ++ + + L +E+   G  PDV
Sbjct: 192 RAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELVERGHHPDV 251

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           +TYNT++ ++   G  ++A     D   + C P ++TY++LI  +CK   I  A E++ +
Sbjct: 252 VTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEARELIQE 311

Query: 283 MAIEGCS--PDIVTYNSLVNFSCKQGKYDDAVLVINNLL--SRGMEPNSITYNTLLHSLG 338
           M  + C   P+I+TYNS ++  CKQ    +A  ++ +L   S  + P+++T++TL+  L 
Sbjct: 312 MTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLC 371

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
             G  D    + D M    + P V TYN L+NGLCK   ++RA      MV K   PD++
Sbjct: 372 KCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVI 431

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           TY+ ++ A CK   ++EAL+LLH +    C+P ++T+N++IDGL K     +A  ++  M
Sbjct: 432 TYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSGEAFQMFDDM 491

Query: 459 -MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
            +++G+ PD IT+ TLI G  R  +  +A  LL  +          A+   I+GL K   
Sbjct: 492 ALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTY----AFNCCINGLSKLGD 547

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           V  A+QV   M+     PD   F+ ++      G  E+A  L+++++
Sbjct: 548 VSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMV 594



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 139/482 (28%), Positives = 242/482 (50%), Gaps = 39/482 (8%)

Query: 121 NKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +LQ+ C  G+   A ++    MAR    P       +I GL + + +    ++ + +V
Sbjct: 184 NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 243

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  PD +TYN ++  LCK G +  A  L  +MS   C P+V+TY+ ++  +   G+  
Sbjct: 244 ERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRID 303

Query: 240 QAIGFWKDQLRKGCP--PYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPDIVT 294
           +A    ++  RK C   P +ITY   ++ +CKQ   A A E+   L D ++   SPD VT
Sbjct: 304 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR-VSPDTVT 362

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +++L++  CK G+ D+A  V +++++ G  PN ITYN L++ L      +    +++ M 
Sbjct: 363 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 422

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +   +P V TY++L++  CK   VD A+   + M S+ C P++VT+N+++  LCK     
Sbjct: 423 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 482

Query: 415 EALQLL-HLLNGSSCSPCLITYNTLID-------------------------------GL 442
           EA Q+   +       P  ITY TLID                               GL
Sbjct: 483 EAFQMFDDMALKHGLVPDKITYCTLIDGLFRTGRAGQAEALLDAMPDPDTYAFNCCINGL 542

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
           +K G + +A+ +Y +M+E  + PD +T   LI G C+A   E+A  L +E+  +  +   
Sbjct: 543 SKLGDVSRALQVYNRMLELELVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDV 602

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             +  +I GLCK+ +V+ A  +L+LM +    P+   ++ +V  +   G  EEA +  ++
Sbjct: 603 MTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEE 662

Query: 563 LI 564
           ++
Sbjct: 663 MV 664



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 208/382 (54%), Gaps = 8/382 (2%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD-NGKFKQAIGFWK 246
            ++N  +  L K G    AI L        C P+  TY+T+LR  +   G  ++ +GF++
Sbjct: 112 FSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGDVERTLGFFR 171

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL-DDMAIEGCSPDIVTYNSLVNFSCKQ 305
                     +  Y I+++ +C+    ARA+E+   +MA +G +P IVTYN+++N  CK 
Sbjct: 172 RIRSSS--RSVADYNIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKS 229

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
            +    + +   L+ RG  P+ +TYNTL+ SL   G  +   ++   M+  S  P V TY
Sbjct: 230 NELGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTY 289

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQ--PDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           ++LINGLCK G +D A     +M  K+C   P+I+TYN+ L  LCK+ M  EA +L+  L
Sbjct: 290 SVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL 349

Query: 424 NGSS--CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
              S   SP  +T++TLIDGL K G +++A  ++  M+  G  P+ IT+  L+ G C+AD
Sbjct: 350 RDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKAD 409

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++E A  +++ +  +G       Y +++   CK+ +VD A+++L  M S    P+   F+
Sbjct: 410 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN 469

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
           +I+  +     + EA++++  +
Sbjct: 470 SIIDGLCKSDRSGEAFQMFDDM 491



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 176/336 (52%), Gaps = 35/336 (10%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARR--NQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
            T + ++   C  G++ +A +LI  M R+  + +P+     + + GL +   + +A ++++
Sbjct: 782  TYSVLINGLCKVGRIDEARELIQEMMRKSCDVLPNIITYNSFLDGLCKQSMMAEACELMR 841

Query: 177  IMVMSGGV---PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
             +   G +   PDT+T++ ++ GLCK GQ   A  + D+M   G  P+V+TYN ++  + 
Sbjct: 842  SL-RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACNVFDDMIAGGYVPNVVTYNVLMNGLC 900

Query: 234  DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
               K ++A    +  + KG  P +ITY++L++  CK   +  A+E+L  MA  GC+P++V
Sbjct: 901  KTDKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASHVDEALELLHGMASRGCTPNVV 960

Query: 294  TYNSLVNFSCKQGKYDDAVLVINNL-LSRGMEPNSITYNTLLHSLGSRG----------- 341
            T+NS+++  CK  +  +A  + +++ L  G+ P+ ITY TL+  L   G           
Sbjct: 961  TFNSIIDGLCKSDQSGEAFQMFDDMTLKHGLAPDKITYCTLIDGLFRTGWAGQAEVLLDA 1020

Query: 342  -----------CWDAVDKILDI------MNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
                       C + + K+ D+      M E    P   T+NILI G CK G  ++A   
Sbjct: 1021 MPDPDTYAFNCCINGLSKLGDVSRALHRMLELELVPDKVTFNILIAGACKAGNFEQASAL 1080

Query: 385  FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            F +MV+KN QPD++T+  ++  LCK G +     ++
Sbjct: 1081 FEEMVAKNLQPDVMTFGALIDGLCKAGQVEATWDIM 1116



 Score =  134 bits (338), Expect = 9e-29,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 170/362 (46%), Gaps = 45/362 (12%)

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG- 272
           ++ G +  + ++N  L  +  +G   +AI  ++ +L   C P   TY+ L+    K  G 
Sbjct: 103 ALPGFKHTIFSFNKYLNLLVKSGSPAKAIDLFRSRLPPRCRPNHFTYSTLLRATYKAGGD 162

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           + R +     +     S  +  YN ++   C+ G+   A+ +    ++R           
Sbjct: 163 VERTLGFFRRIRSS--SRSVADYNIVLQSLCRAGETARALEIFRGEMAR----------- 209

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
                      D V            +PT+ TYN +INGLCK   +   +  F ++V + 
Sbjct: 210 -----------DGV------------APTIVTYNTIINGLCKSNELGAGMELFEELVERG 246

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             PD+VTYNT++ +LCK G L EA +L   ++  SC P ++TY+ LI+GL K G +++A 
Sbjct: 247 HHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRSCVPNVVTYSVLINGLCKVGRIDEAR 306

Query: 453 VLYGQMMENG--ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS----AYR 506
            L  +M      + P+ IT+ + + G C+     EA +L++ +  R   +R S     + 
Sbjct: 307 ELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL--RDGSLRVSPDTVTFS 364

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            +I GLCK  ++D A  V + MI+  Y P+   ++ +V  +      E A+ + + +++ 
Sbjct: 365 TLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDK 424

Query: 567 KV 568
            V
Sbjct: 425 GV 426


>gi|302783901|ref|XP_002973723.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
 gi|300158761|gb|EFJ25383.1| hypothetical protein SELMODRAFT_99426 [Selaginella moellendorffii]
          Length = 581

 Score =  255 bits (651), Expect = 5e-65,   Method: Compositional matrix adjust.
 Identities = 135/454 (29%), Positives = 255/454 (56%), Gaps = 2/454 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + I+   C  GK+T+A ++++ M  +   PD      ++  L R  ++++A +
Sbjct: 7   EPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGKVDEADE 66

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M+  G   +T+ YN ++ GLCK   I  A  LL+EM+  G EPD ITYNTIL  + 
Sbjct: 67  LFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNTILSGLC 126

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD--DMAIEGCSPD 291
             GK  +A  F+     +G  P ++ Y  L++ + K+  +A A  +    DMA    +PD
Sbjct: 127 RMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWGLFKTMDMADRKVAPD 186

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           ++TYN+L++  C+  K D+A+ +  +++++G  P+++TYN++L  L  +   D  +++  
Sbjct: 187 LITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFK 246

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M ++  +P   TY+I+++G C+ G + R +  + +M  K   PD++  N V+  LCK  
Sbjct: 247 KMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDMLCKAK 306

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +++A ++L  ++     P ++TYN L+DGL K   ++KA  L+  M++NG +PD +++ 
Sbjct: 307 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYS 366

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            ++ G C+ ++V +A  L   + +R        + +++ GLCK+ K+D A  +L++M   
Sbjct: 367 VVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDVMSEH 426

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              PD    +T++  +  D  T+EA +L+Q ++E
Sbjct: 427 NVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVE 460



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 124/395 (31%), Positives = 215/395 (54%), Gaps = 6/395 (1%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD +TY+ ++ GLCK G++  A+ +++EM+  G  PDV TY  I+  +   GK
Sbjct: 1   MAEKGFEPDVVTYSTIISGLCKTGKVTEALEMVEEMTEKGVNPDVATYTIIVDRLCRAGK 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A   +   + +GC    + Y  LI  +CK   I RA ++L++MA +G  PD +TYN+
Sbjct: 61  VDEADELFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYEPDNITYNT 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG----CWDAVDKILDIM 353
           +++  C+ GK  +A    +++ SRG  P+ + YN LL +L   G     W  + K +D M
Sbjct: 121 ILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAW-GLFKTMD-M 178

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +   +P + TYN LI+G C+    D A+  F  +++K   PD VTYN++L  L ++  +
Sbjct: 179 ADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNM 238

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +EA ++   +  S C+P   TY+ ++ G  + G M + + LY +M E   SPD +    +
Sbjct: 239 DEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAV 298

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I   C+A +V++A  +L+E+ K G       Y +++ GLCK+  VD A ++   M+ +  
Sbjct: 299 IDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGC 358

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            PD   +S ++  +       +A  L+ ++IE K+
Sbjct: 359 APDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKL 393



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/456 (28%), Positives = 232/456 (50%), Gaps = 4/456 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N IL   C  GK+++A +  D M  R   PD      L+  L +  ++ +A  
Sbjct: 112 EPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKVAEAWG 171

Query: 174 VLQIMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           + + M M+     PD ITYN ++ G C+  +   A+ L  ++   G  PD +TYN+IL  
Sbjct: 172 LFKTMDMADRKVAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLG 231

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +       +A   +K  +  GC P   TY+I++   C+   +AR +E+ ++M  +  SPD
Sbjct: 232 LARKSNMDEAEEMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPD 291

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           ++  N++++  CK  K DDA  V+  +   G  P+ +TYN LL  L      D   ++  
Sbjct: 292 VLLCNAVIDMLCKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFS 351

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M +   +P + +Y++++NGLCK   V  A   F++M+ +   PD+VT+N ++  LCK G
Sbjct: 352 TMVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAG 411

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L+EA  LL +++  +  P  +T  TL+ GL +    ++A+ L+  M+E G   D + H 
Sbjct: 412 KLDEAKDLLDVMSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHN 471

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMI 529
            ++ G CR  ++ +A+   K + K   +       Y  +++ L ++ +VD A+   + M 
Sbjct: 472 IVLAGLCREGKLAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMT 531

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            S   PD   ++T++  +   G   +A +L Q + E
Sbjct: 532 GSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKE 567



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 115/387 (29%), Positives = 206/387 (53%), Gaps = 2/387 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N ++  FC   K  +A KL   +  +  +PD     +++ GL R   +++A 
Sbjct: 183 VAPDLITYNTLIDGFCRVEKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAE 242

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + MV SG  P+  TY++++ G C+ G +   + L +EM+     PDV+  N ++  +
Sbjct: 243 EMFKKMVDSGCAPNGATYSIVLSGHCRVGNMARCLELYEEMTEKRFSPDVLLCNAVIDML 302

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K   A    ++  + G  P ++TY IL++ +CK   + +A E+   M   GC+PDI
Sbjct: 303 CKAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDI 362

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V+Y+ ++N  CK  K  DA ++ + ++ R + P+ +T+N L+  L   G  D    +LD+
Sbjct: 363 VSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDV 422

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+E +  P   T   L++GLC+    D A+  F  MV K    D++ +N VL  LC+EG 
Sbjct: 423 MSEHNVLPDGVTCTTLMHGLCRDKRTDEAVRLFQYMVEKGTVADVLPHNIVLAGLCREGK 482

Query: 413 LNEALQLLHLLNGS--SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           L +AL     +  S    SP ++TY TL++ L + G +++A+  + QM  +G +PD + +
Sbjct: 483 LAQALLFFKSMVKSDGEFSPDVVTYTTLVNALIEAGRVDQAVDYFQQMTGSGCAPDYVAY 542

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRG 497
            TL+ G  +  +  +A  L + + ++G
Sbjct: 543 NTLMNGLRKQGRHIQADRLTQAMKEKG 569


>gi|291622145|emb|CBJ23782.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  255 bits (651), Expect = 6e-65,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 243/453 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + ++  T + +L  FC R +L  A  ++  M +    PD     +L+ G     RI +A 
Sbjct: 112 IPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 171

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PDT+T+N ++ GL    +   A+AL+D M   GC+PD+ TY T++  +
Sbjct: 172 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 231

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+   K   +      ++ Y  +I+ +CK   +  A ++ + M  +G  PD+
Sbjct: 232 CKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 291

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYNSL++  C  G++ DA  ++++++ R + PN +T+N+L+ +    G     +K+ D 
Sbjct: 292 FTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 351

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M + S  P + TYN LING C +  +D A   F  MVSK+C PD+VTYNT++   CK   
Sbjct: 352 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAKR 411

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + E ++L   ++        +TYNTLI GL + G  + A  ++ +M+ +G+ PD IT+  
Sbjct: 412 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 471

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++E+A+ + + + K   +     Y ++I G+CK+ KV+    +   +    
Sbjct: 472 LLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 531

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KP+  +++T++      G+ EEA  L++++ E
Sbjct: 532 VKPNVIIYTTMISGFCRKGLKEEADALFREMKE 564



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 228/447 (51%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+ +N  S  KL DA  L   M +    P       L+  + ++++ +    + + M   
Sbjct: 51  KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   +  TY++++   C+R Q+  A+A+L +M   G EPD++T +++L       +  +A
Sbjct: 111 GIPHNHYTYSILLNCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEA 170

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +      +  G  P  +T+  LI  +      + A+ ++D M   GC PD+ TY ++VN 
Sbjct: 171 VALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNG 230

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK+G  D A+ ++  +    +E N + YNT++  L      D    + + M      P 
Sbjct: 231 LCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPD 290

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           VFTYN LI+ LC YG    A    + M+ +   P++VT+N+++ A  KEG L EA +L  
Sbjct: 291 VFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKEGKLIEAEKLFD 350

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +   S  P ++TYN+LI+G      +++A  ++  M+     PD +T+ TLI GFC+A 
Sbjct: 351 EMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLIKGFCKAK 410

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +VEE ++L +E+ +RG       Y  +I GL ++   DMA ++ + M+S    PD   +S
Sbjct: 411 RVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYS 470

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKV 568
            ++  +   G  E+A  +++ L + K+
Sbjct: 471 ILLDGLCKYGKLEKALVVFEYLQKSKM 497



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 133/450 (29%), Positives = 224/450 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + +L  +C   ++++A  L+D M      PD      LI GL   ++  +A  
Sbjct: 148 EPDIVTLSSLLNGYCHGKRISEAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVA 207

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  PD  TY  +V GLCKRG I  A++LL +M     E +V+ YNTI+  + 
Sbjct: 208 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLC 267

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
                  A   +     KG  P + TY  LI  +C     + A  +L DM     +P++V
Sbjct: 268 KYKHMDDAFDLFNKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+NSL++   K+GK  +A  + + ++ R ++PN +TYN+L++        D   +I  +M
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 387

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P V TYN LI G CK   V+  +  F +M  +    + VTYNT++  L + G  
Sbjct: 388 VSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 447

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A ++   +      P +ITY+ L+DGL K G +EKA+V++  + ++ + P+  T+  +
Sbjct: 448 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIM 507

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+A +VE+  DL   +  +G K     Y  +I G C+    + A  +   M     
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 567

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            PD   ++T+++    DG    + +L +++
Sbjct: 568 LPDSGCYNTLIRARLRDGDKAASAELIKEM 597



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/397 (29%), Positives = 193/397 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C RG +  A  L+  M +     +      +I GL +   ++ A  + 
Sbjct: 220 DLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEANVVIYNTIIDGLCKYKHMDDAFDLF 279

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD  TYN ++  LC  G+   A  LL +M      P+V+T+N+++      
Sbjct: 280 NKMETKGIKPDVFTYNSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFNSLIDAFAKE 339

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A   + + +++   P ++TY  LI   C    +  A ++   M  + C PD+VTY
Sbjct: 340 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 399

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+   CK  + ++ + +   +  RG+  N++TYNTL+  L   G  D   KI   M  
Sbjct: 400 NTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVS 459

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TY+IL++GLCKYG +++A+  F  +     +P+I TYN ++  +CK G + +
Sbjct: 460 DGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGKVED 519

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
              L   L+     P +I Y T+I G  +KG  E+A  L+ +M E+G  PD   + TLI 
Sbjct: 520 GWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNTLIR 579

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
              R      + +L+KE+   G     S   +VI+ L
Sbjct: 580 ARLRDGDKAASAELIKEMRSCGFVGDASTISMVINML 616



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 149/302 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  F   GKL +A KL D M +R+  P+     +LI G    DR+++A ++  +M
Sbjct: 328 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 387

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V    +PD +TYN ++ G CK  ++   + L  EMS  G   + +TYNT+++ +F  G  
Sbjct: 388 VSKDCLPDVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 447

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   +K  +  G PP +ITY+IL++ +CK   + +A+ V + +      P+I TYN +
Sbjct: 448 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIM 507

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK GK +D   +  +L  +G++PN I Y T++     +G  +  D +   M E   
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 567

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    YN LI    + G    +     +M S     D  T + V+  L    +    L+
Sbjct: 568 LPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVINMLHDGRLEKSYLE 627

Query: 419 LL 420
           +L
Sbjct: 628 ML 629



 Score = 61.2 bits (147), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 37/129 (28%), Positives = 60/129 (46%), Gaps = 2/129 (1%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  V  D  T + +L   C  GKL  A  + + + +    P+ +    +I G+ +  +
Sbjct: 459 SDG--VPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPNIYTYNIMIEGMCKAGK 516

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +E    +   + + G  P+ I Y  M+ G C++G    A AL  EM   G  PD   YNT
Sbjct: 517 VEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGTLPDSGCYNT 576

Query: 228 ILRTMFDNG 236
           ++R    +G
Sbjct: 577 LIRARLRDG 585


>gi|302769173|ref|XP_002968006.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
 gi|300164744|gb|EFJ31353.1| hypothetical protein SELMODRAFT_88008 [Selaginella moellendorffii]
          Length = 737

 Score =  254 bits (650), Expect = 7e-65,   Method: Compositional matrix adjust.
 Identities = 138/446 (30%), Positives = 233/446 (52%), Gaps = 1/446 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  FC       A +L+D M +R  +P       +I+GL    R++ A    
Sbjct: 166 DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 225

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      P  ITY ++V  LCK  +I  A  +L++M  +GC P+V+TYNT++      
Sbjct: 226 RDM-QRNCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 284

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+  +   L   C P + TY ILI+  CKQ       ++L +M   GC P+ +TY
Sbjct: 285 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 344

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++   K GKY DA  +   +L R  +P+  T+N ++      G  D   ++  +M +
Sbjct: 345 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD 404

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P ++TYNI+I+G C+   +D A     +M    C PD+VTYN+++  LCK   ++E
Sbjct: 405 RGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDE 464

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A ++  +L        ++T +TLIDGL K   ++ A  L  +M  NG +PD + +  LI 
Sbjct: 465 AYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIH 524

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GFC+ADQ+++++    E+  +G       Y +VI  LCKS +V     +L+ M+     P
Sbjct: 525 GFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTP 584

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQ 561
           D  V+++++  +      +EAY+L++
Sbjct: 585 DAIVYTSVIDGLCKSDSYDEAYELYK 610



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 231/449 (51%), Gaps = 36/449 (8%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  L+   +R  + ++A  + +        PD+ITY+ ++ G CK    + A  LLDEM 
Sbjct: 135 CNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 194

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G  P    YNTI++ + DNG+   A+  ++D +++ C P +ITYTIL++ +CK   I+
Sbjct: 195 KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD-MQRNCAPSVITYTILVDALCKSARIS 253

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR------------- 321
            A  +L+DM   GC+P++VTYN+L+N  CK G  D+AV++ N +L               
Sbjct: 254 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 313

Query: 322 ----------------------GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
                                 G EPN ITYNTL+ SL   G +     +  +M      
Sbjct: 314 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 373

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P+ FT+N++I+  CK G +D A   F  M  + C PDI TYN ++   C+   +++A QL
Sbjct: 374 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 433

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +  + C P ++TYN+++ GL K   +++A  +Y  +   G   D +T  TLI G C+
Sbjct: 434 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 493

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           + ++++A  LL+E+ + G+     AY ++IHG CK+ ++D ++     M+     P    
Sbjct: 494 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 553

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +S ++ K+       +   L + ++E  V
Sbjct: 554 YSIVIDKLCKSARVRDGCMLLKTMLERGV 582



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 229/445 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C   +++DAS +++ M      P+      LI G  ++  +++A  +   M
Sbjct: 238 TYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 297

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +   PD  TYN+++ G CK+ + +    LL EM   GCEP+ ITYNT++ ++  +GK+
Sbjct: 298 LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKY 357

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    +  LR+ C P   T+ ++I+  CK   +  A E+   M   GC PDI TYN +
Sbjct: 358 IDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIM 417

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++ +C+  + DDA  ++  +   G  P+ +TYN+++  L      D   ++ +++    +
Sbjct: 418 ISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGY 477

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              V T + LI+GLCK   +D A     +M      PD+V Y  ++   CK   L+++L 
Sbjct: 478 FLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLA 537

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               +    C P +ITY+ +ID L K   +    +L   M+E G++PD I + ++I G C
Sbjct: 538 FFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLC 597

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           ++D  +EA +L K + + G       Y +++  LCK  ++D AI +LE+M S    PD  
Sbjct: 598 KSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTV 657

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++++          ++A++L+Q +
Sbjct: 658 TYNSVFDGFWKSAEHDKAFRLFQAM 682



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 187/355 (52%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC  G+L  A +L  +M  R  +PD +    +I G  R +RI+ A ++L+ M
Sbjct: 378 TFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQLLERM 437

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  PD +TYN +V GLCK  Q+  A  + + +   G   DV+T +T++  +  + + 
Sbjct: 438 TEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRL 497

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    ++  R G  P ++ YTILI   CK   + +++    +M  +GC P ++TY+ +
Sbjct: 498 DDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIV 557

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK  +  D  +++  +L RG+ P++I Y +++  L     +D   ++  +M +   
Sbjct: 558 IDKLCKSARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGC 617

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +PTV TYN+L++ LCK   +D AI+    M S  C PD VTYN+V     K    ++A +
Sbjct: 618 APTVVTYNVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFR 677

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           L   +    CSP    Y+ L+  L  +  M++AM ++ + +E G   D    RTL
Sbjct: 678 LFQAMKSRGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVDPEISRTL 732



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 138/281 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N I+   C   ++ +A ++ +++       D   C  LI GL +  R++ A K+L
Sbjct: 445 DVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLL 504

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +G  PD + Y +++ G CK  Q+  ++A   EM   GC P VITY+ ++  +  +
Sbjct: 505 REMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKS 564

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + +      K  L +G  P  I YT +I+ +CK      A E+   M   GC+P +VTY
Sbjct: 565 ARVRDGCMLLKTMLERGVTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTY 624

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N LV+  CK  + D+A+ ++  + S G  P+++TYN++          D   ++   M  
Sbjct: 625 NVLVDKLCKVSRLDEAIHLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKS 684

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              SPT F Y++L+  L     +D+A+  + + +      D
Sbjct: 685 RGCSPTPFMYSLLLTKLVAEEKMDQAMEIWEEALEAGADVD 725



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 106/227 (46%), Gaps = 5/227 (2%)

Query: 344 DAVDKILDIMNEASHSP----TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
           D +DK +   +  +  P    + FT N L++   +      A + F       C PD +T
Sbjct: 110 DDLDKAVKFFDWCTGQPGYKHSKFTCNCLLSAFVRKKKAQEAYDLFKNHRCGLCSPDSIT 169

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y+T++   CK     +A +LL  +      P    YNT+I GL   G ++ A+V Y  M 
Sbjct: 170 YSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRDMQ 229

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
            N  +P  IT+  L+   C++ ++ +A  +L+++ + G       Y  +I+G CK   +D
Sbjct: 230 RN-CAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMD 288

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            A+ +   M+ +   PD   ++ ++         ++  KL Q+++++
Sbjct: 289 EAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKY 335



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/140 (25%), Positives = 61/140 (43%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D      ++   C      +A +L  +M +    P       L+  L ++ R+++A 
Sbjct: 582 VTPDAIVYTSVIDGLCKSDSYDEAYELYKLMKQTGCAPTVVTYNVLVDKLCKVSRLDEAI 641

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L++M   G +PDT+TYN +  G  K  +   A  L   M   GC P    Y+ +L  +
Sbjct: 642 HLLEVMESDGCLPDTVTYNSVFDGFWKSAEHDKAFRLFQAMKSRGCSPTPFMYSLLLTKL 701

Query: 233 FDNGKFKQAIGFWKDQLRKG 252
               K  QA+  W++ L  G
Sbjct: 702 VAEEKMDQAMEIWEEALEAG 721


>gi|115453829|ref|NP_001050515.1| Os03g0569800 [Oryza sativa Japonica Group]
 gi|113548986|dbj|BAF12429.1| Os03g0569800 [Oryza sativa Japonica Group]
          Length = 773

 Score =  254 bits (649), Expect = 9e-65,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 246/453 (54%), Gaps = 4/453 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN--QIPDFHFCINLIRGLIRIDRIEK 170
           V  +  T   +++  C+RG++ DA +++D M+ +    IP  +  I  +    R      
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVI--LEAACRSGGFRN 164

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           + +VL+ M   G   DT   N+++  +C++G +  A+ LL +++  GCE D+++YN +L+
Sbjct: 165 SVRVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLK 224

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +    ++        + +R  C P ++T+  LI  +C+     R  EVL  M+  GC+P
Sbjct: 225 GLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTP 284

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           DI  Y ++++  CK+G  + A  ++N + S G++PN + YNT+L  L S   W   +++L
Sbjct: 285 DIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELL 344

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M +        T+NIL++  C+ GLVDR I    QM+S  C PD++TY TV+   CKE
Sbjct: 345 SEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKE 404

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G+++EA+ LL  ++   C P  ++Y  ++ GL   G    A  L  QM++ G  P+ +T 
Sbjct: 405 GLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTF 464

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            TLI   C+   VE+A++LLK++   G      +Y  VI GL K+ K + A+++L +M++
Sbjct: 465 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVN 524

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
               P+  ++S+I   ++ +G   +  +++  +
Sbjct: 525 KGISPNTIIYSSIACALSREGRVNKVIQMFDNI 557



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 222/417 (53%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  + N +L+  C   +  D  +L+D M R +  P+      LI  L R    E+  +
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL  M   G  PD   Y  ++ G+CK G +  A  +L+ M   G +P+V+ YNT+L+ + 
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              ++K+A     +  +K CP   +T+ IL++  C+   + R IE+L+ M   GC PD++
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +++N  CK+G  D+AV+++ ++ S G +PN+++Y  +L  L S G W   ++++  M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P   T+N LIN LCK GLV++AI    QM+   C PD+++Y+TV+  L K G  
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EAL+LL+++     SP  I Y+++   L+++G + K + ++  + +  I  D + +  +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           I   C+  + + A+D    +   G     S Y ++I GL        A ++L  + S
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 207/380 (54%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+  T+  +V GLC RG+I  A+ +LDEMS  GC P    Y+ IL     +G F+ ++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            +    KGC        +++  +C+Q  +  A+ +L  +A  GC  DIV+YN+++   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             ++ D   +++ ++     PN +T+NTL+  L   G ++ V ++L  M+E   +P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y  +I+G+CK G ++ A    N+M S   +P++V YNTVL  LC      EA +LL  + 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
              C    +T+N L+D   + G +++ + L  QM+ +G  PD IT+ T+I GFC+   ++
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EAV LLK +   G K    +Y +V+ GLC + +   A +++  MI     P+   F+T++
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 545 KKVADDGMTEEAYKLWQKLI 564
             +   G+ E+A +L ++++
Sbjct: 469 NFLCKKGLVEQAIELLKQML 488


>gi|12583808|gb|AAG59660.1|AC084319_18 putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
          Length = 772

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 131/441 (29%), Positives = 241/441 (54%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C+RG++ DA +++D M+ +   P       ++    R      + +VL+ M   G
Sbjct: 117 VVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRVLEAMHAKG 176

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              DT   N+++  +C++G +  A+ LL +++  GCE D+++YN +L+ +    ++    
Sbjct: 177 CTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCMAKRWGDVE 236

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               + +R  C P ++T+  LI  +C+     R  EVL  M+  GC+PDI  Y ++++  
Sbjct: 237 ELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRMYATIIDGI 296

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK+G  + A  ++N + S G++PN + YNT+L  L S   W   +++L  M +       
Sbjct: 297 CKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMFQKDCPLDD 356

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+NIL++  C+ GLVDR I    QM+S  C PD++TY TV+   CKEG+++EA+ LL  
Sbjct: 357 VTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLIDEAVMLLKS 416

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++   C P  ++Y  ++ GL   G    A  L  QM++ G  P+ +T  TLI   C+   
Sbjct: 417 MSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLINFLCKKGL 476

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VE+A++LLK++   G      +Y  VI GL K+ K + A+++L +M++    P+  ++S+
Sbjct: 477 VEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKGISPNTIIYSS 536

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           I   ++ +G   +  +++  +
Sbjct: 537 IACALSREGRVNKVIQMFDNI 557



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 222/417 (53%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  + N +L+  C   +  D  +L+D M R +  P+      LI  L R    E+  +
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL  M   G  PD   Y  ++ G+CK G +  A  +L+ M   G +P+V+ YNT+L+ + 
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              ++K+A     +  +K CP   +T+ IL++  C+   + R IE+L+ M   GC PD++
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +++N  CK+G  D+AV+++ ++ S G +PN+++Y  +L  L S G W   ++++  M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P   T+N LIN LCK GLV++AI    QM+   C PD+++Y+TV+  L K G  
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EAL+LL+++     SP  I Y+++   L+++G + K + ++  + +  I  D + +  +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           I   C+  + + A+D    +   G     S Y ++I GL        A ++L  + S
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 207/380 (54%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+  T+  +V GLC RG+I  A+ +LDEMS  GC P    Y+ IL     +G F+ ++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            +    KGC        +++  +C+Q  +  A+ +L  +A  GC  DIV+YN+++   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             ++ D   +++ ++     PN +T+NTL+  L   G ++ V ++L  M+E   +P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y  +I+G+CK G ++ A    N+M S   +P++V YNTVL  LC      EA +LL  + 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
              C    +T+N L+D   + G +++ + L  QM+ +G  PD IT+ T+I GFC+   ++
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EAV LLK +   G K    +Y +V+ GLC + +   A +++  MI     P+   F+T++
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 545 KKVADDGMTEEAYKLWQKLI 564
             +   G+ E+A +L ++++
Sbjct: 469 NFLCKKGLVEQAIELLKQML 488


>gi|125544564|gb|EAY90703.1| hypothetical protein OsI_12306 [Oryza sativa Indica Group]
          Length = 644

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 244/451 (54%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  +  T   +++  C+RG++ DA +++D M+ +   P       ++    R      + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +VL+ M   G   DT   N+++  +C++G +  A+ LL +++  GCE D+++YN +L+ +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               ++        + +R  C P ++T+  LI  +C+     R  EVL  M+  GC+PDI
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y ++++  CK+G  + A  ++N + S G++PN + YNT+L  L S   W   +++L  
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +        T+NIL++  C+ GLVDR I    QM+S  C PD++TY TV+   CKEG+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA+ LL  ++   C P  ++Y  ++ GL   G    A  L  QM++ G  P+ +T  T
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI   C+   VE+A++LLK++   G      +Y  VI GL K+ K + A+++L +M++  
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             P+  ++S+I   ++ +G   +  +++  +
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNI 557



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 222/417 (53%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  + N +L+  C   +  D  +L+D M R +  P+      LI  L R    E+  +
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL  M   G  PD   Y  ++ G+CK G +  A  +L+ M   G +P+V+ YNT+L+ + 
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              ++K+A     +  +K CP   +T+ IL++  C+   + R IE+L+ M   GC PD++
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +++N  CK+G  D+AV+++ ++ S G +PN+++Y  +L  L S G W   ++++  M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P   T+N LIN LCK GLV++AI    QM+   C PD+++Y+TV+  L K G  
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EAL+LL+++     SP  I Y+++   L+++G + K + ++  + +  I  D + +  +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           I   C+  + + A+D    +   G     S Y ++I GL        A ++L  + S
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 207/380 (54%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+  T+  +V GLC RG+I  A+ +LDEMS  GC P    Y+ IL     +G F+ ++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            +    KGC        +++  +C+Q  +  A+ +L  +A  GC  DIV+YN+++   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             ++ D   +++ ++     PN +T+NTL+  L   G ++ V ++L  M+E   +P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y  +I+G+CK G ++ A    N+M S   +P++V YNTVL  LC      EA +LL  + 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
              C    +T+N L+D   + G +++ + L  QM+ +G  PD IT+ T+I GFC+   ++
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EAV LLK +   G K    +Y +V+ GLC + +   A +++  MI     P+   F+T++
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 545 KKVADDGMTEEAYKLWQKLI 564
             +   G+ E+A +L ++++
Sbjct: 469 NFLCKKGLVEQAIELLKQML 488


>gi|108709396|gb|ABF97191.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|215687193|dbj|BAG91758.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|222625245|gb|EEE59377.1| hypothetical protein OsJ_11489 [Oryza sativa Japonica Group]
          Length = 644

 Score =  254 bits (648), Expect = 1e-64,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 244/451 (54%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  +  T   +++  C+RG++ DA +++D M+ +   P       ++    R      + 
Sbjct: 107 VPPNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSV 166

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +VL+ M   G   DT   N+++  +C++G +  A+ LL +++  GCE D+++YN +L+ +
Sbjct: 167 RVLEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGL 226

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               ++        + +R  C P ++T+  LI  +C+     R  EVL  M+  GC+PDI
Sbjct: 227 CMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDI 286

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y ++++  CK+G  + A  ++N + S G++PN + YNT+L  L S   W   +++L  
Sbjct: 287 RMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSE 346

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +        T+NIL++  C+ GLVDR I    QM+S  C PD++TY TV+   CKEG+
Sbjct: 347 MFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGL 406

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA+ LL  ++   C P  ++Y  ++ GL   G    A  L  QM++ G  P+ +T  T
Sbjct: 407 IDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNT 466

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI   C+   VE+A++LLK++   G      +Y  VI GL K+ K + A+++L +M++  
Sbjct: 467 LINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMVNKG 526

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             P+  ++S+I   ++ +G   +  +++  +
Sbjct: 527 ISPNTIIYSSIACALSREGRVNKVIQMFDNI 557



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 127/417 (30%), Positives = 222/417 (53%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  + N +L+  C   +  D  +L+D M R +  P+      LI  L R    E+  +
Sbjct: 213 EADIVSYNAVLKGLCMAKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHE 272

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL  M   G  PD   Y  ++ G+CK G +  A  +L+ M   G +P+V+ YNT+L+ + 
Sbjct: 273 VLAQMSEHGCTPDIRMYATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLC 332

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              ++K+A     +  +K CP   +T+ IL++  C+   + R IE+L+ M   GC PD++
Sbjct: 333 SAERWKEAEELLSEMFQKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVI 392

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +++N  CK+G  D+AV+++ ++ S G +PN+++Y  +L  L S G W   ++++  M
Sbjct: 393 TYTTVINGFCKEGLIDEAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQM 452

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P   T+N LIN LCK GLV++AI    QM+   C PD+++Y+TV+  L K G  
Sbjct: 453 IQQGCPPNPVTFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 512

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EAL+LL+++     SP  I Y+++   L+++G + K + ++  + +  I  D + +  +
Sbjct: 513 EEALELLNVMVNKGISPNTIIYSSIACALSREGRVNKVIQMFDNIKDTTIRSDAVLYNAV 572

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           I   C+  + + A+D    +   G     S Y ++I GL        A ++L  + S
Sbjct: 573 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTMLIKGLASEGLAKEAQELLSELCS 629



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 118/380 (31%), Positives = 207/380 (54%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+  T+  +V GLC RG+I  A+ +LDEMS  GC P    Y+ IL     +G F+ ++  
Sbjct: 109 PNAYTFFPVVRGLCTRGRIADALEVLDEMSFKGCAPIPPMYHVILEAACRSGGFRNSVRV 168

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            +    KGC        +++  +C+Q  +  A+ +L  +A  GC  DIV+YN+++   C 
Sbjct: 169 LEAMHAKGCTLDTGNCNLVLNAICEQGCVDEAVGLLRKLAFFGCEADIVSYNAVLKGLCM 228

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             ++ D   +++ ++     PN +T+NTL+  L   G ++ V ++L  M+E   +P +  
Sbjct: 229 AKRWGDVEELMDEMVRVDCAPNIVTFNTLIGYLCRNGLFERVHEVLAQMSEHGCTPDIRM 288

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y  +I+G+CK G ++ A    N+M S   +P++V YNTVL  LC      EA +LL  + 
Sbjct: 289 YATIIDGICKEGHLEVANEILNRMPSYGLKPNVVCYNTVLKGLCSAERWKEAEELLSEMF 348

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
              C    +T+N L+D   + G +++ + L  QM+ +G  PD IT+ T+I GFC+   ++
Sbjct: 349 QKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLSHGCMPDVITYTTVINGFCKEGLID 408

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EAV LLK +   G K    +Y +V+ GLC + +   A +++  MI     P+   F+T++
Sbjct: 409 EAVMLLKSMSSCGCKPNTVSYTIVLKGLCSAGRWVDAEELMSQMIQQGCPPNPVTFNTLI 468

Query: 545 KKVADDGMTEEAYKLWQKLI 564
             +   G+ E+A +L ++++
Sbjct: 469 NFLCKKGLVEQAIELLKQML 488


>gi|224130790|ref|XP_002328377.1| predicted protein [Populus trichocarpa]
 gi|222838092|gb|EEE76457.1| predicted protein [Populus trichocarpa]
          Length = 688

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 238/450 (52%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  + N ++   C+ G    A  +   M +    P+      +I  L +   +  A  
Sbjct: 195 EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD 254

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            L  MV  G  PD ITYN +V GLC  GQ+  A  L   M  +GC+PDV+TYN I+ +++
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY 314

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +     A  F  + + +G PP ++TYT ++  +C    +  AI +   M  +GC PD+V
Sbjct: 315 KDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVV 374

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            YN++++  CK    +DA+  ++ ++ RG+ PN++TY+T+LH   + G  D   ++   M
Sbjct: 375 AYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEM 434

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
              +  P   T++IL++GLC+ G+V  A   F  M  K  +P+I TYN ++   C    +
Sbjct: 435 VGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKM 494

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           NEA ++  ++ G  C+P L +YN LI+G      M+KA  L  QM    ++P+ +T+ T+
Sbjct: 495 NEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTI 554

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           + G C   ++ +A +L K++   G       Y ++++GLCK   +D A+++ + M   + 
Sbjct: 555 MKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKL 614

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +PD  +++ +++ +   G  E A  L+ KL
Sbjct: 615 EPDIILYTILIEGMFIGGKLEVAKGLFSKL 644



 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 248/475 (52%), Gaps = 19/475 (4%)

Query: 94  LTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH 153
           +T +  + +PSLP  +G F  N   T +           + DA      MAR N  P   
Sbjct: 46  ITTSTFTKNPSLPKKNGGFASNSSNTIS-----------VDDALASFYRMARMNPRPSI- 93

Query: 154 FCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
             +   + L  I ++++ S V+ +   M + G      + N+++  LC+   +  A+++ 
Sbjct: 94  --VEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILINCLCRLNHVDFAVSVW 151

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
            +M   G +PDVIT+ T++  + + GK K A+  + + +R G  P +I+Y  LI  +C  
Sbjct: 152 GKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNS 211

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
                A+ V   M   GC P++VTYN++++  CK    +DA+  ++ ++ RG+ P++ITY
Sbjct: 212 GNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITY 271

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N+++H L   G  +   ++   M +    P V TYNI+I+ L K  LV+ A +  ++MV 
Sbjct: 272 NSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVD 331

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +   PD+VTY T+L  LC  G LNEA++L   +    C P ++ YNT+ID L K   +  
Sbjct: 332 QGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVND 391

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVI 509
           AM    +M++ GI P+ +T+ T++ GFC   Q++EA  L KE+  R N M N+  + +++
Sbjct: 392 AMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGR-NVMPNTLTFSILV 450

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            GLC+   V  A  V E M     +P+   ++ ++          EA K+++ ++
Sbjct: 451 DGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMV 505



 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 225/414 (54%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD      LI G+    +I+ A ++   MV SG  PD I+YN ++ GLC  G    A+ +
Sbjct: 161 PDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEPDVISYNTLINGLCNSGNTNMAVHV 220

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
             +M  +GC+P+V+TYNTI+ ++  +     A+ F  + + +G PP  ITY  ++  +C 
Sbjct: 221 FKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCC 280

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A  +   M   GC PD+VTYN +++   K    +DA   ++ ++ +G+ P+ +T
Sbjct: 281 LGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVT 340

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y T+LH L   G  +   ++   M +    P V  YN +I+ LCK  LV+ A+   ++MV
Sbjct: 341 YTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMV 400

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +   P+ VTY+T+L   C  G L+EA QL   + G +  P  +T++ L+DGL ++G + 
Sbjct: 401 DRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVS 460

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A  ++  M E G+ P+  T+  L+ G+C   ++ EA  + + +  +G      +Y ++I
Sbjct: 461 EARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILI 520

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +G C S+++D A  +L  M   +  P+   ++TI+K +   G   +A +L++K+
Sbjct: 521 NGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKM 574



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 239/452 (52%), Gaps = 3/452 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+ + C    + DA   +  M  R   PD     +++ GL  + ++ +A+++ + M
Sbjct: 235 TYNTIIDSLCKDRLVNDAMDFLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRM 294

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  PD +TYN+++  L K   +  A   L EM   G  PDV+TY TIL  +   G+ 
Sbjct: 295 EQNGCKPDVVTYNIIIDSLYKDRLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQL 354

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +AI  +K   +KGC P ++ Y  +I+ +CK   +  A+E L +M   G  P+ VTY+++
Sbjct: 355 NEAIRLFKKMEQKGCKPDVVAYNTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTI 414

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  G+ D+A  +   ++ R + PN++T++ L+  L   G       + + M E   
Sbjct: 415 LHGFCNLGQLDEATQLFKEMVGRNVMPNTLTFSILVDGLCQEGMVSEARWVFETMTEKGV 474

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P ++TYN L+NG C    ++ A   F  MV K C PD+ +YN ++   C    +++A  
Sbjct: 475 EPNIYTYNALMNGYCLRCKMNEARKVFEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKA 534

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  ++    +P  +TYNT++ GL   G +  A  L+ +M  +G+ P  +T+  L+ G C
Sbjct: 535 LLTQMSVKKLTPNTVTYNTIMKGLCYVGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLC 594

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +   ++EA+ L K + ++  +     Y ++I G+    K+++A  +   + +   +P   
Sbjct: 595 KHGHLDEALKLFKSMKEKKLEPDIILYTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGR 654

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFE 570
            ++ ++K +  +G+++EAY+L++K   WK+ +
Sbjct: 655 TYNVMIKGLLKEGLSDEAYELFRK---WKMMK 683



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 129/417 (30%), Positives = 210/417 (50%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T N I+   C  G+L +A++L   M +    PD      +I  L +   + 
Sbjct: 261 GRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKDRLVN 320

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A+  L  MV  G  PD +TY  ++ GLC  GQ+  AI L  +M   GC+PDV+ YNTI+
Sbjct: 321 DAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAYNTII 380

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
            ++  +     A+ F  + + +G PP  +TY+ ++   C    +  A ++  +M      
Sbjct: 381 DSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVGRNVM 440

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P+ +T++ LV+  C++G   +A  V   +  +G+EPN  TYN L++    R   +   K+
Sbjct: 441 PNTLTFSILVDGLCQEGMVSEARWVFETMTEKGVEPNIYTYNALMNGYCLRCKMNEARKV 500

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            +IM     +P + +YNILING C    +D+A     QM  K   P+ VTYNT++  LC 
Sbjct: 501 FEIMVGKGCAPDLHSYNILINGYCNSRRMDKAKALLTQMSVKKLTPNTVTYNTIMKGLCY 560

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G L +A +L   +  S   P L+TY+ L++GL K G +++A+ L+  M E  + PD I 
Sbjct: 561 VGRLLDAQELFKKMCSSGMLPTLMTYSILLNGLCKHGHLDEALKLFKSMKEKKLEPDIIL 620

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           +  LI G     ++E A  L  ++   G +     Y ++I GL K    D A ++  
Sbjct: 621 YTILIEGMFIGGKLEVAKGLFSKLSADGIQPPGRTYNVMIKGLLKEGLSDEAYELFR 677



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 178/370 (48%), Gaps = 35/370 (9%)

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +    R    P ++ +   +  + K    +  + + + M + G +  + + N L+N
Sbjct: 77  ALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNILIN 136

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+    D AV V   +   G++P+ IT+ TL++ + + G      ++ + M  + H P
Sbjct: 137 CLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGHEP 196

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE---------- 410
            V +YN LINGLC  G  + A++ F +M    C+P++VTYNT++ +LCK+          
Sbjct: 197 DVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMDFL 256

Query: 411 -------------------------GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                                    G LNEA +L   +  + C P ++TYN +ID L K 
Sbjct: 257 SEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLYKD 316

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             +  A     +M++ GI PD +T+ T++ G C   Q+ EA+ L K++ ++G K    AY
Sbjct: 317 RLVNDAADFLSEMVDQGIPPDVVTYTTILHGLCYLGQLNEAIRLFKKMEQKGCKPDVVAY 376

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I  LCK + V+ A++ L  M+     P+   +STI+    + G  +EA +L+++++ 
Sbjct: 377 NTIIDSLCKDRLVNDAMEFLSEMVDRGIPPNAVTYSTILHGFCNLGQLDEATQLFKEMVG 436

Query: 566 WKVFEKGTTL 575
             V     T 
Sbjct: 437 RNVMPNTLTF 446



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 71/257 (27%), Positives = 135/257 (52%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           DDA+     +      P+ + +   L S+     +  V  + + M+    + TV++ NIL
Sbjct: 75  DDALASFYRMARMNPRPSIVEFGKFLGSIAKMKQYSTVVYLCNQMDLFGVTHTVYSLNIL 134

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN LC+   VD A++ + +M     QPD++T+ T++  +C EG +  A++L + +  S  
Sbjct: 135 INCLCRLNHVDFAVSVWGKMFKLGIQPDVITFTTLINGVCNEGKIKVAVELYNEMVRSGH 194

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P +I+YNTLI+GL   G    A+ ++ +M +NG  P+ +T+ T+I   C+   V +A+D
Sbjct: 195 EPDVISYNTLINGLCNSGNTNMAVHVFKKMEQNGCKPNVVTYNTIIDSLCKDRLVNDAMD 254

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
            L E+  RG       Y  ++HGLC   +++ A ++ + M  +  KPD   ++ I+  + 
Sbjct: 255 FLSEMVGRGIPPDAITYNSIVHGLCCLGQLNEATRLFKRMEQNGCKPDVVTYNIIIDSLY 314

Query: 549 DDGMTEEAYKLWQKLIE 565
            D +  +A     ++++
Sbjct: 315 KDRLVNDAADFLSEMVD 331


>gi|302769784|ref|XP_002968311.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
 gi|300163955|gb|EFJ30565.1| hypothetical protein SELMODRAFT_89033 [Selaginella moellendorffii]
          Length = 600

 Score =  253 bits (646), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 246/482 (51%), Gaps = 36/482 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L  FC  GKL +A K+ D   +R  +PD      LI G  + D++++A ++L
Sbjct: 119 DVVTYNTLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRIL 178

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQI-------------------------------- 203
           Q MV    VPD +TYN +V GLCK G++                                
Sbjct: 179 QRMVSESLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRR 238

Query: 204 -RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
             SA  LL++M ++GC+PD+++YN ++  +       +A+  +   LR+G  P + TY I
Sbjct: 239 LESARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNI 298

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI+ + K+  +  A E+   +   G  PD +TY   ++  CK G+ +DA+L++ ++  +G
Sbjct: 299 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 358

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             P+ +++N +++ L      D  + +L  M     SP   ++N LI G C+ G   +A+
Sbjct: 359 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 418

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCK---EGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            +F +M+ +  +P +VTYN ++  LCK   EG + EA+ L   +      P ++TY+ LI
Sbjct: 419 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 478

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DGL K G ++ A  L G M   G  P+  T+ +LI G C  D+V+EA++L   + ++G  
Sbjct: 479 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLDKVDEALELFVAMVEKGCV 538

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +I  LCK + VD A+ + +  + +   P   ++ +++  +      +EA KL
Sbjct: 539 PDTITYGTIISALCKQEMVDKALALFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKL 598

Query: 560 WQ 561
            Q
Sbjct: 599 LQ 600



 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 149/480 (31%), Positives = 237/480 (49%), Gaps = 37/480 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L++    GK+  A + ++ +  +       F I  I GL R  RI  A  V 
Sbjct: 15  DAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLCDISTFNI-YISGLCRASRIGDAQTVF 73

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ ITYN ++ GLC  G++  A AL + M  +G  PDV+TYNT+L      
Sbjct: 74  DGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKV 133

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A+  +   +++G  P ++TY  LI   CK   +  A  +L  M  E   PD+VTY
Sbjct: 134 GKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVTY 193

Query: 296 NSLVNFSCKQGKYDDAVLVI---------------------------------NNLLSRG 322
           NSLVN  CK G+ D+A ++I                                   ++  G
Sbjct: 194 NSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKMVLNG 253

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +P+ ++YN L+H L          K+   +    + P V TYNILI+GL K   V+ A 
Sbjct: 254 CKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRVNEAF 313

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             F+ +V    +PD +TY   +  LCK G + +AL +L  ++   C P ++++N +I+GL
Sbjct: 314 ELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGL 373

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+  +++A VL   M   G SP+ I+  TLI G CRA + ++A+   KE+ KRG K   
Sbjct: 374 CKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTV 433

Query: 503 SAYRLVIHGLCKSK---KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             Y +++ GLCK++   ++  AI + + MI     PD   +S ++  +   G  ++A +L
Sbjct: 434 VTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRL 493



 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/420 (31%), Positives = 238/420 (56%), Gaps = 5/420 (1%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD +    L+R L++  +IEKA + ++ +++  G+ D  T+N+ + GLC+  +I  A  +
Sbjct: 14  PDAYTVGILLRSLLKSGKIEKAHRFVEQLLVK-GLCDISTFNIYISGLCRASRIGDAQTV 72

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
            D M   G  P+ ITYN +L  + + G+   A   ++  ++ G  P ++TY  L+   CK
Sbjct: 73  FDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCK 132

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A+++ D     G  PD+VTYN+L+N  CK  K D+A  ++  ++S  + P+ +T
Sbjct: 133 VGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSESLVPDVVT 192

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK-YGLVDRAINSFNQM 388
           YN+L++ L   G    VD+   ++ +   SP V TY+ LI+GLC+    ++ A     +M
Sbjct: 193 YNSLVNGLCKNG---RVDEARMLIVDKGFSPNVITYSTLISGLCRELRRLESARQLLEKM 249

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           V   C+PDIV+YN ++  L +E  ++EAL+L   +      P + TYN LIDGL K+  +
Sbjct: 250 VLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILIDGLLKEDRV 309

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +A  L+  ++++G+ PD IT+   I G C+A +VE+A+ +LK++ ++G      ++  V
Sbjct: 310 NEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAV 369

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           I+GLCK K+VD A  +L  M +    P+   F+T++      G  ++A   ++++++  V
Sbjct: 370 INGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGV 429



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/320 (31%), Positives = 176/320 (55%), Gaps = 5/320 (1%)

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           D+L +   P   T  IL+  + K   I +A   ++ + ++G   DI T+N  ++  C+  
Sbjct: 6   DKLVRIYSPDAYTVGILLRSLLKSGKIEKAHRFVEQLLVKGLC-DISTFNIYISGLCRAS 64

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           +  DA  V + +   G  PN ITYN LL  L + G       + + M +A +SP V TYN
Sbjct: 65  RIGDAQTVFDGMRKHGFWPNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYN 124

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L++G CK G +D A+  F+  V +   PD+VTYN ++   CK   L+EA ++L  +   
Sbjct: 125 TLLHGFCKVGKLDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSE 184

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA-DQVEE 485
           S  P ++TYN+L++GL K G +++A +L   +++ G SP+ IT+ TLI G CR   ++E 
Sbjct: 185 SLVPDVVTYNSLVNGLCKNGRVDEARML---IVDKGFSPNVITYSTLISGLCRELRRLES 241

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A  LL+++   G K    +Y  +IHGL + + V  A+++   ++   Y+P+   ++ ++ 
Sbjct: 242 ARQLLEKMVLNGCKPDIVSYNALIHGLAREQGVSEALKLFGSVLRQGYEPEVPTYNILID 301

Query: 546 KVADDGMTEEAYKLWQKLIE 565
            +  +    EA++L+  L++
Sbjct: 302 GLLKEDRVNEAFELFSGLVK 321



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 104/338 (30%), Positives = 178/338 (52%), Gaps = 22/338 (6%)

Query: 90  KLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI 149
           KL G ++ ++ ++P +P            T N ++       ++ +A +L   + +    
Sbjct: 279 KLFG-SVLRQGYEPEVP------------TYNILIDGLLKEDRVNEAFELFSGLVKHGLE 325

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD       I GL +  R+E A  +L+ M   G VPD +++N ++ GLCK  ++  A  L
Sbjct: 326 PDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVL 385

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L  M   GC P+ I++NT++      GK+K+A+  +K+ L++G  P ++TY IL++ +CK
Sbjct: 386 LSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCK 445

Query: 270 ---QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
              +  I  AI + D M  +G  PD+VTY++L++   K GK DDA  ++  + ++G  PN
Sbjct: 446 ARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPN 505

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDI---MNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             TYN+L+  L      D VD+ L++   M E    P   TY  +I+ LCK  +VD+A+ 
Sbjct: 506 VYTYNSLISGLCG---LDKVDEALELFVAMVEKGCVPDTITYGTIISALCKQEMVDKALA 562

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            F+  +     P    Y +++  LC    ++EAL+LL 
Sbjct: 563 LFDGSLEAGVVPTSGMYFSLIDGLCAVARVDEALKLLQ 600


>gi|302760809|ref|XP_002963827.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
 gi|300169095|gb|EFJ35698.1| hypothetical protein SELMODRAFT_79421 [Selaginella moellendorffii]
          Length = 616

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 157/506 (31%), Positives = 257/506 (50%), Gaps = 13/506 (2%)

Query: 76  DEWSSESHVLAVNKKLRGLTITKKSHDPS-----LPSSDGPFVENDEKTNNKILQNFCSR 130
           DE+S    V   N  + GL    K  +P        + +   V+ +  T N ++   C  
Sbjct: 89  DEFSVAPDVYIFNVLIHGLF---KDGNPDQAVKLFENMESSRVKPEIVTYNTVISGLCKS 145

Query: 131 GKLTDASKLIDIMARRN--QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           G L  A +L++ M R+     PD      LI    R  RI +A    + M  +G  PD +
Sbjct: 146 GNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVL 205

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T N++V G+CK G +  A+ +LD M ++G  PDVITYN+I+  +   GK  +A    K  
Sbjct: 206 TCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTM 265

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
               C P L+T+  L++  CK   + RA+EVL++M  E   PD++TY  LVN  C+ G+ 
Sbjct: 266 ---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQV 322

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             A  ++  ++ +G  P+ I Y +L+  L   G  +   K++  M+       V  Y+ L
Sbjct: 323 QVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSL 382

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           ++G C+ G V +A     +MVS N  P + TYN VLG L K+G +++A+ L+  L     
Sbjct: 383 VSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGY 442

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P ++TYNTLIDGL K   + +A  L  +M   G  P+D+T  ++++G CR  +V++A  
Sbjct: 443 VPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWS 502

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L+ E+ ++ +      Y  +I GLCKS ++D A  VL+ M       DD  +  ++  ++
Sbjct: 503 LVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMS 562

Query: 549 DDGMTEEAYKLWQKLIEWKVFEKGTT 574
             G   EA  ++ +++       G+T
Sbjct: 563 HGGRVAEAMAMYDEMVARGFLPDGST 588



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/459 (29%), Positives = 227/459 (49%), Gaps = 40/459 (8%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C  G+   A + +  +   +  PD +    LI GL +    ++A K+ + M  S 
Sbjct: 68  LIRGNCKAGQAMRALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSR 127

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDNGKFKQ 240
             P+ +TYN ++ GLCK G +  A  LL+EM   G    PD++TYNT++   +   + ++
Sbjct: 128 VKPEIVTYNTVISGLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIRE 187

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A  F +     G  P ++T  IL+  +CK   +  A+E+LD M + G  PD++TYNS+++
Sbjct: 188 ACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIH 247

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  GK  +A  ++  +      P+ +T+NTLL      G      ++L+ M   +  P
Sbjct: 248 ALCVAGKVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILP 304

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY IL+NGLC+ G V  A     ++V +   PD++ Y +++  LCK G + EA +L+
Sbjct: 305 DVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLV 364

Query: 421 HLLNGSSCS-----------------------------------PCLITYNTLIDGLAKK 445
             ++   C                                    P L TYN ++ GL K 
Sbjct: 365 KEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKD 424

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G + KA+ L   ++  G  PD +T+ TLI G C+A++V EA DL  E+  RG    +   
Sbjct: 425 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASRGCFPNDVTL 484

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
             V+ GLC+  +VD A  ++  M   R+ P+  V+++++
Sbjct: 485 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLI 523



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/456 (28%), Positives = 236/456 (51%), Gaps = 14/456 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  F    ++ +A    + M      PD   C  L+ G+ +   +E+A ++L
Sbjct: 168 DIVTYNTLINAFYRASRIREACAFREKMKAAGINPDVLTCNILVSGICKDGDVEEALEIL 227

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M ++G VPD ITYN ++  LC  G++  A  +L  MS   C PD++T+NT+L      
Sbjct: 228 DGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEILKTMS---CSPDLVTFNTLLDGFCKA 284

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+   ++  R+   P +ITYTIL+  +C+   +  A  +L+++  +G  PD++ Y
Sbjct: 285 GMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAY 344

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            SLV+  CK G+ ++A  ++  +  RG     + Y++L+      G      +IL  M  
Sbjct: 345 TSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMYSSLVSGYCRAGNVHKAREILAEMVS 404

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P +FTYNI++ GL K G + +A++  + +V++   PD+VTYNT++  LCK   + E
Sbjct: 405 INMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVRE 464

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   +    C P  +T  +++ GL + G ++ A  L  +M     +P+ + + +LI 
Sbjct: 465 ACDLADEMASRGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLID 524

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C++D++++A  +L  +  +G  + + AYR +I  +    +V  A+ + + M++  + P
Sbjct: 525 GLCKSDRMDDACMVLDAMRGQGVALDDFAYRKLIVSMSHGGRVAEAMAMYDEMVARGFLP 584

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           D +   T+          EEA  +   + EW   E+
Sbjct: 585 DGSTSKTL----------EEA-AMSNSVFEWTNLEE 609



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 128/419 (30%), Positives = 221/419 (52%), Gaps = 11/419 (2%)

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL- 209
           D H   +L+  L++     +  KV + ++ SG  P+ +T+ +++ G CK GQ   A+   
Sbjct: 26  DVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRALEFL 85

Query: 210 --LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
             LDE SV+   PDV  +N ++  +F +G   QA+  +++       P ++TY  +I  +
Sbjct: 86  RALDEFSVA---PDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISGL 142

Query: 268 CKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
           CK   + +A E+L++M  +G   +PDIVTYN+L+N   +  +  +A      + + G+ P
Sbjct: 143 CKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGINP 202

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           + +T N L+  +   G  +   +ILD M  A   P V TYN +I+ LC  G V  A    
Sbjct: 203 DVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEIL 262

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
             M   +C PD+VT+NT+L   CK GML  AL++L  +   +  P +ITY  L++GL + 
Sbjct: 263 KTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRV 319

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G ++ A  L  +++  G  PD I + +L+ G C++ ++EEA  L+KE+  RG +     Y
Sbjct: 320 GQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVMY 379

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             ++ G C++  V  A ++L  M+S    P    ++ ++  +  DG   +A  L   L+
Sbjct: 380 SSLVSGYCRAGNVHKAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 438



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 193/385 (50%), Gaps = 40/385 (10%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G + DV +YN +L  +  +G   +    +KD L  GC P L+T+ ILI   CK     RA
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMRA 81

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           +E L  +     +PD+  +N L++   K G  D AV +  N+ S  ++P  +TYNT++  
Sbjct: 82  LEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVISG 141

Query: 337 LGSRGCWDAVDKIL------------DI-------------------------MNEASHS 359
           L   G  +   ++L            DI                         M  A  +
Sbjct: 142 LCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGIN 201

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P V T NIL++G+CK G V+ A+   + M      PD++TYN+++ ALC  G + EA ++
Sbjct: 202 PDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAEI 261

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +   SCSP L+T+NTL+DG  K G + +A+ +  +M    I PD IT+  L+ G CR
Sbjct: 262 LKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCR 318

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             QV+ A  LL+EI ++G      AY  ++ GLCKS +++ A ++++ M     +    +
Sbjct: 319 VGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSVRGCRTGVVM 378

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLI 564
           +S++V      G   +A ++  +++
Sbjct: 379 YSSLVSGYCRAGNVHKAREILAEMV 403



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/280 (32%), Positives = 146/280 (52%), Gaps = 5/280 (1%)

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +G   D+ +YN L++   K G +     V  +LL  G  PN +T+  L+      G    
Sbjct: 21  DGYKHDVHSYNHLLDILVKSGHHFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQAMR 80

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             + L  ++E S +P V+ +N+LI+GL K G  D+A+  F  M S   +P+IVTYNTV+ 
Sbjct: 81  ALEFLRALDEFSVAPDVYIFNVLIHGLFKDGNPDQAVKLFENMESSRVKPEIVTYNTVIS 140

Query: 406 ALCKEGMLNEALQLLH--LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
            LCK G L +A +LL   +  G   +P ++TYNTLI+   +   + +A     +M   GI
Sbjct: 141 GLCKSGNLEKARELLEEMIRKGGKSAPDIVTYNTLINAFYRASRIREACAFREKMKAAGI 200

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           +PD +T   L+ G C+   VEEA+++L  +   G       Y  +IH LC + KV  A +
Sbjct: 201 NPDVLTCNILVSGICKDGDVEEALEILDGMKLAGPVPDVITYNSIIHALCVAGKVVEAAE 260

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +L+ M  S   PD   F+T++      GM   A ++ +++
Sbjct: 261 ILKTMSCS---PDLVTFNTLLDGFCKAGMLPRALEVLEEM 297


>gi|302758218|ref|XP_002962532.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
 gi|300169393|gb|EFJ35995.1| hypothetical protein SELMODRAFT_404389 [Selaginella moellendorffii]
          Length = 1031

 Score =  253 bits (645), Expect = 2e-64,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 251/487 (51%), Gaps = 39/487 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N I+   C  GK   A  L+ +MA RN  P       LI GL +   +++A 
Sbjct: 292 VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAK 351

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++   V SG VPD +TY+++  GLCKRG+I  A  L+ EMS  GC P+++TYNT++  +
Sbjct: 352 DLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGL 411

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K ++A    +  +  G  P ++TYTI+++ +CK+  + +A+++++ M   GC+P +
Sbjct: 412 CKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSV 471

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TY +L+   C+ G+ D+A  +   ++S+    +++ Y +L++            K++D 
Sbjct: 472 ITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG 531

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +     +P +  YN L++G CK G +D   N F  M  + C P+I TYN V+  LCK G 
Sbjct: 532 IR---GTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGK 588

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA   L  ++ + C P +++YN +IDGL K    ++A  +  QM++ GI PD +T+ T
Sbjct: 589 VDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNT 648

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG-----------------------------NKMRN- 502
           L+  FC+ ++ ++AV +LK + K G                               +RN 
Sbjct: 649 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 708

Query: 503 ------SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                 + Y  +I  LCK   +  A+ +++ M     + +   ++  + ++  +G  +EA
Sbjct: 709 CVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA 768

Query: 557 YKLWQKL 563
             L  ++
Sbjct: 769 SSLLSEM 775



 Score =  249 bits (636), Expect = 3e-63,   Method: Compositional matrix adjust.
 Identities = 147/484 (30%), Positives = 242/484 (50%), Gaps = 33/484 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N ++   C   K   AS+++  M  R   PD     +++ GL +  + E+A 
Sbjct: 257 VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 316

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L +M      P   TYN ++ GLCK+  +  A  L+DE   SG  PDV+TY+ +   +
Sbjct: 317 SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGL 376

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  +A    K+   KGC P L+TY  LI+ +CK     +A E+L+ +   G  PD+
Sbjct: 377 CKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVPDV 436

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  +V+  CK+G+ D A+ ++  +L RG  P+ ITY  L+  L   G  D    I   
Sbjct: 437 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 496

Query: 353 M-------------------------NEASH-------SPTVFTYNILINGLCKYGLVDR 380
           M                          EA         +P +  YN L++G CK G +D 
Sbjct: 497 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDE 556

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
             N F  M  + C P+I TYN V+  LCK G ++EA   L  ++ + C P +++YN +ID
Sbjct: 557 IPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIID 616

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL K    ++A  +  QM++ GI PD +T+ TL+  FC+ ++ ++AV +LK + K G   
Sbjct: 617 GLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 676

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVL-ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            N  Y  +I GL ++ ++  A +++ E++ +       T ++TI+ ++  +G  ++A  L
Sbjct: 677 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL 736

Query: 560 WQKL 563
              +
Sbjct: 737 MDHM 740



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 138/453 (30%), Positives = 241/453 (53%), Gaps = 3/453 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N I+   C +     A + +  M  R   PD      LI GL +  + +KAS++L
Sbjct: 225 DAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEML 284

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  PDT+T+N ++ GLCK G+   A +LL  M+   C P   TYNT++  +   
Sbjct: 285 HEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQ 344

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A     + +  G  P ++TY+IL + +CK+  I  A E++ +M+ +GC+P++VTY
Sbjct: 345 QNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTY 404

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK  K + A  ++ +L+S G  P+ +TY  ++  L   G  D   K+++ M +
Sbjct: 405 NTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLK 464

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P+V TY  L+ GLC+ G VD A + F +MVSK+C  D + Y +++   CK     E
Sbjct: 465 RGCTPSVITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKE 524

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +++  + G+   P +  YN L+DG  K+G +++   ++  M   G  P+  T+  ++ 
Sbjct: 525 AQKVVDGIRGT---PYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMD 581

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  +V+EA   L+ +   G      +Y ++I GL K+ K   A QVL+ MI +   P
Sbjct: 582 GLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPP 641

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           D   ++T++ +   +   ++A  + + +I+  V
Sbjct: 642 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGV 674



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 127/394 (32%), Positives = 218/394 (55%), Gaps = 7/394 (1%)

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           DRI     + + M+ +G  PD+ TY++++  LC+  QI  A  +LD+  V G +P+V  Y
Sbjct: 142 DRI---PAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVY 198

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
             + R     G+ K A+  +    R    P  I Y  +I   C++     A+E L +M  
Sbjct: 199 TILTRAFCKTGRLKDALEIF----RNIPSPDAIAYNAIIHGHCRKNDCDGALEFLKEMNE 254

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
              +PD+ TYN L++  CK  K D A  +++ ++ RG+ P+++T+N+++  L   G ++ 
Sbjct: 255 RKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFER 314

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              +L +M E +  P+  TYN LI+GLCK   VDRA +  ++ VS    PD+VTY+ +  
Sbjct: 315 AHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGFVPDVVTYSILAD 374

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            LCK G ++EA +L+  ++G  C+P L+TYNTLIDGL K    EKA  L   ++ +G  P
Sbjct: 375 GLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELLESLVSSGFVP 434

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +T+  ++ G C+  ++++A+ +++ + KRG       Y  ++ GLC++ +VD A  + 
Sbjct: 435 DVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIF 494

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           + M+S     D   + ++V        T+EA K+
Sbjct: 495 KEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKV 528



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 225/445 (50%), Gaps = 7/445 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  LQ     G       + + M      PD +    +I+ L ++++I+KA  +L   
Sbjct: 127 TRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLDKA 186

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G  P+   Y ++    CK G+++ A+ +   +      PD I YN I+         
Sbjct: 187 KVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKNDC 242

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+ F K+   +   P + TY ILI+ +CK     +A E+L +M   G +PD VT+NS+
Sbjct: 243 DGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSI 302

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK++ A  ++  +  R   P+  TYNTL+  L  +   D    ++D    +  
Sbjct: 303 MDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSSGF 362

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TY+IL +GLCK G +D A     +M  K C P++VTYNT++  LCK     +A +
Sbjct: 363 VPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYE 422

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  L  S   P ++TY  ++DGL K+G ++KA+ +   M++ G +P  IT+  L+ G C
Sbjct: 423 LLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLC 482

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  +V+EA  + KE+  +       AY  +++G CKS +   A +V++ +   R  P   
Sbjct: 483 RTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI---RGTPYID 539

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
           V++ ++     +G  +E   +++ +
Sbjct: 540 VYNALMDGYCKEGRLDEIPNVFEDM 564



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 231/453 (50%), Gaps = 37/453 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++  C  G++ +A  +   M  ++   D    ++L+ G  +  R ++A KV+  +
Sbjct: 473 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 532

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
               G P    YN ++ G CK G++     + ++M+  GC P++ TYN ++  +  +GK 
Sbjct: 533 ---RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 589

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A  F +     GC P +++Y I+I+ + K      A +VLD M   G  PD VTYN+L
Sbjct: 590 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 649

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG-SRGCWDAVDKILDIMNEAS 357
           +   CK+ ++DDAV ++ N++  G++P+++TYNTL+  L  +    DA + + +++    
Sbjct: 650 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 709

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
                 TYN +I+ LCK G + +A+   + M     + + VTYN  +  LCKEG L+EA 
Sbjct: 710 VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEAS 769

Query: 418 QLLH----LLNGSSCSPCLI-----------------------------TYNTLIDGLAK 444
            LL     L +  S +  +I                             T+N LID   K
Sbjct: 770 SLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTK 829

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              +++A+ L G M++ G SP  IT+  +I   C+ D+V++A +L  E+  RG    + +
Sbjct: 830 TKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVS 889

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           Y ++I+GLC   +   A+QVLE M SS  + DD
Sbjct: 890 YTVLIYGLCGQGRGKEALQVLEEMASSDCEIDD 922



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 146/550 (26%), Positives = 246/550 (44%), Gaps = 103/550 (18%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + +    C RG++ +A +L+  M+ +   P+      LI GL +  + EKA ++L
Sbjct: 365 DVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKAYELL 424

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + +V SG VPD +TY ++V GLCK G++  A+ +++ M   GC P VITY  ++  +   
Sbjct: 425 ESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRT 484

Query: 236 GKFKQAIGFWKDQLRKGCP--------------------------------PYLITYTIL 263
           G+  +A   +K+ + K C                                 PY+  Y  L
Sbjct: 485 GRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNAL 544

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           ++  CK+  +     V +DMA  GC P+I TYN +++  CK GK D+A   + ++ S G 
Sbjct: 545 MDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGC 604

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ ++YN ++  L          ++LD M +A   P   TYN L+   CK    D A+ 
Sbjct: 605 VPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVG 664

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH--LLNGSSCSPCLITYNTLIDG 441
               M+     PD VTYNT++  L +   L +A +L+H  L NG   S C  TYNT+ID 
Sbjct: 665 ILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSAC-TTYNTIIDR 723

Query: 442 LAKKGCMEKAMVLYGQMMENGISP--------------------------------DDIT 469
           L K+GC+++A++L   M  +G+                                  D+++
Sbjct: 724 LCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDEVS 783

Query: 470 HRTLIWGFCRADQVE------------------------------------EAVDLLKEI 493
           + T+I G C+A+Q++                                    EA+ LL  +
Sbjct: 784 YTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLM 843

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            +RG       Y +VI  LCK  KVD A ++ + M           ++ ++  +   G  
Sbjct: 844 VQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRG 903

Query: 554 EEAYKLWQKL 563
           +EA ++ +++
Sbjct: 904 KEALQVLEEM 913



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 115/362 (31%), Positives = 193/362 (53%), Gaps = 4/362 (1%)

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
           ++AI         G +    T N  L+T+ +NG   +    ++  L  G  P   TY ++
Sbjct: 107 QTAIVFFVWAGDRGFKHSTFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLV 166

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+ +C+   I +A  +LD   + G  P++  Y  L    CK G+  DA+ +  N+ S   
Sbjct: 167 IKSLCQMNQIDKAFTMLDKAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIPS--- 223

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P++I YN ++H    +   D   + L  MNE   +P VFTYNILI+GLCK    D+A  
Sbjct: 224 -PDAIAYNAIIHGHCRKNDCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASE 282

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
             ++MV +   PD VT+N+++  LCK G    A  LL ++   +C P   TYNTLI GL 
Sbjct: 283 MLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLC 342

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K+  +++A  L  + + +G  PD +T+  L  G C+  +++EA +L+KE+  +G      
Sbjct: 343 KQQNVDRAKDLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLV 402

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I GLCK+ K + A ++LE ++SS + PD   ++ IV  +  +G  ++A K+ + +
Sbjct: 403 TYNTLIDGLCKASKTEKAYELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGM 462

Query: 564 IE 565
           ++
Sbjct: 463 LK 464



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 197/378 (52%), Gaps = 4/378 (1%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T N  +  L + G      A+ + M  +G  PD  TY+ +++++    +  +A     
Sbjct: 125 TFTRNCFLQTLLENGSSDRIPAMFERMLDAGYAPDSYTYHLVIKSLCQMNQIDKAFTMLD 184

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
               +G  P +  YTIL    CK   +  A+E+  ++     SPD + YN++++  C++ 
Sbjct: 185 KAKVRGFKPEVSVYTILTRAFCKTGRLKDALEIFRNIP----SPDAIAYNAIIHGHCRKN 240

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             D A+  +  +  R + P+  TYN L+  L      D   ++L  M +   +P   T+N
Sbjct: 241 DCDGALEFLKEMNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFN 300

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +++GLCK G  +RA +    M  +NC+P   TYNT++  LCK+  ++ A  L+     S
Sbjct: 301 SIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKDLVDEFVSS 360

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P ++TY+ L DGL K+G +++A  L  +M   G +P+ +T+ TLI G C+A + E+A
Sbjct: 361 GFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGKGCTPNLVTYNTLIDGLCKASKTEKA 420

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            +LL+ +   G       Y +++ GLCK  ++D A++++E M+     P    ++ +++ 
Sbjct: 421 YELLESLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEG 480

Query: 547 VADDGMTEEAYKLWQKLI 564
           +   G  +EA+ ++++++
Sbjct: 481 LCRTGRVDEAHHIFKEMV 498



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 186/382 (48%), Gaps = 34/382 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G+L +   + + MA R  +P+      ++ GL +  ++++A   L+ M  
Sbjct: 542 NALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHS 601

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G VPD ++YN+++ GL K  + + A  +LD+M  +G  PD +TYNT++       +F  
Sbjct: 602 AGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDD 661

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI-VTYNSLV 299
           A+G  K+ ++ G  P  +TY  LI  + +   +  A E++ +M   GC      TYN+++
Sbjct: 662 AVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTII 721

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN----E 355
           +  CK+G    A+L+++++   G+E N++TYN  +  L   G  D    +L  M+    E
Sbjct: 722 DRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEMDTLRDE 781

Query: 356 ASHSPTVF-----------------------------TYNILINGLCKYGLVDRAINSFN 386
            S++  +                              T+N+LI+   K   +D A+    
Sbjct: 782 VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLG 841

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            MV + C P ++TYN V+  LCK   +++A +L   +         ++Y  LI GL  +G
Sbjct: 842 LMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQG 901

Query: 447 CMEKAMVLYGQMMENGISPDDI 468
             ++A+ +  +M  +    DD+
Sbjct: 902 RGKEALQVLEEMASSDCEIDDL 923



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 158/328 (48%), Gaps = 13/328 (3%)

Query: 111 PFVEN--------DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGL 162
           PF+E+        D  + N I+       K  +A +++D M +    PD      L+   
Sbjct: 594 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQF 653

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
            + +R + A  +L+ M+ +G  PD +TYN ++ GL +  ++  A  L+ EM  +GC    
Sbjct: 654 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA 713

Query: 223 -ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
             TYNTI+  +   G  KQA+         G     +TY I I+++CK+  +  A  +L 
Sbjct: 714 CTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 773

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS-RGMEPNSITYNTLLHSLGSR 340
           +M       D V+Y +++   CK  + D A  +   +++ +G+   S T+N L+ +    
Sbjct: 774 EMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKT 830

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
              D    +L +M +   SP+V TYN++I  LCK   VD+A   F++M  +      V+Y
Sbjct: 831 KRLDEALTLLGLMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 890

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSC 428
             ++  LC +G   EALQ+L  +  S C
Sbjct: 891 TVLIYGLCGQGRGKEALQVLEEMASSDC 918



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 145/295 (49%), Gaps = 15/295 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  FC   +  DA  ++  M +    PD      LI GL + +R+  A +++
Sbjct: 642 DAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELM 701

Query: 176 QIMVMSGGVPDT-ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             M+ +G V     TYN ++  LCK G ++ A+ L+D M+  G E + +TYN  +  +  
Sbjct: 702 HEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCK 761

Query: 235 NGKFKQAIGFWK--DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM-AIEGCSPD 291
            G+  +A       D LR       ++YT +I  +CK   + RA ++  +M A++G    
Sbjct: 762 EGRLDEASSLLSEMDTLRDE-----VSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCIT 816

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
             T+N L++   K  + D+A+ ++  ++ RG  P+ ITYN ++  L      D VDK  +
Sbjct: 817 SHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMVITCLCK---LDKVDKAWE 873

Query: 352 IMNEASHSPTV---FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           + +E +    V    +Y +LI GLC  G    A+    +M S +C+ D + +  V
Sbjct: 874 LFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKWEDV 928



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 56/200 (28%), Positives = 99/200 (49%), Gaps = 4/200 (2%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  VE +  T N  +   C  G+L +AS L+  M   + + D      +I GL + ++++
Sbjct: 742 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLD 798

Query: 170 KASKVLQIMVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           +ASK+ + MV   G+  T  T+N+++    K  ++  A+ LL  M   GC P VITYN +
Sbjct: 799 RASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLGLMVQRGCSPSVITYNMV 858

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +    K  +A   + +   +G     ++YT+LI  +C Q     A++VL++MA   C
Sbjct: 859 ITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 918

Query: 289 SPDIVTYNSLVNFSCKQGKY 308
             D + +  +   S  Q  +
Sbjct: 919 EIDDLKWEDVAPHSQFQTTF 938


>gi|224130828|ref|XP_002328386.1| predicted protein [Populus trichocarpa]
 gi|222838101|gb|EEE76466.1| predicted protein [Populus trichocarpa]
          Length = 617

 Score =  253 bits (645), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 125/406 (30%), Positives = 233/406 (57%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI  L R+  ++ A  V+  M   G  PD IT+N ++ GLC  G+I+ A+ L +EM  SG
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            EP+VI+YNT++  +  NG    A+  ++   +    P ++TY  +I+ +CK   +  A+
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E L +M   G  PD+VTYN++++  C  G+ ++A  +   ++ R + P+++T+N L+  L
Sbjct: 257 EFLSEMVDRGIPPDVVTYNTILHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGL 316

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G       + + M E    P  +TYN L++G C +  +D AI     M+ K C P++
Sbjct: 317 CKEGMVSEARCVSETMTEKGAEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNL 376

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            +YN ++   CK   +NEA +LL  ++  + +P  +TY+TL+ GL + G   +A+ L+ +
Sbjct: 377 SSYNILINGYCKSKRMNEAKRLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKE 436

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M  +G+ PD + +  L+ GFC+   ++EA+ LLKE+ +R  K     Y ++I G+  + K
Sbjct: 437 MCSSGLLPDLMAYSILLDGFCKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGK 496

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +++A ++   + +   +PD   ++ ++K +  +G+++EAY+ ++K+
Sbjct: 497 LEVAKELFSKLSADGIRPDIWTYNVMIKGLLKEGLSDEAYEFFRKM 542



 Score =  234 bits (598), Expect = 6e-59,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 242/470 (51%), Gaps = 11/470 (2%)

Query: 94  LTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH 153
           +T +  +  PSLP     F  N   T+N I         + DA      M R N  P   
Sbjct: 49  ITTSACTEKPSLPQKHCGFGSN---TSNDI--------SIDDALTSFYRMVRMNPRPSVV 97

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
                +  + +  +   A  +   M + G   +  + N+++  LC+   +  A++++ +M
Sbjct: 98  EFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNVLINCLCRLSHVDFAVSVMGKM 157

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              G +PD IT+NT++  + + GK K+A+G + + +  G  P +I+Y  +I  +CK    
Sbjct: 158 FKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNT 217

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A+ V   M      P++VTYN++++  CK    ++AV  ++ ++ RG+ P+ +TYNT+
Sbjct: 218 IMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTI 277

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           LH   S G  +   ++   M   +  P   T+NIL++GLCK G+V  A      M  K  
Sbjct: 278 LHGFCSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGA 337

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
           +P+  TYN ++   C    ++EA+++L ++ G  C+P L +YN LI+G  K   M +A  
Sbjct: 338 EPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKR 397

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L  +M E  ++PD +T+ TL+ G C+  +  EA++L KE+   G      AY +++ G C
Sbjct: 398 LLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFC 457

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           K   +D A+++L+ M   R KP+  +++ +++ +   G  E A +L+ KL
Sbjct: 458 KHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKL 507



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 126/438 (28%), Positives = 227/438 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++   C+ GK+ +A  L + M      P+      +I GL +      A 
Sbjct: 162 IQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSGHEPNVISYNTVINGLCKNGNTIMAV 221

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V + M  + G P+ +TYN ++  LCK   +  A+  L EM   G  PDV+TYNTIL   
Sbjct: 222 RVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAVEFLSEMVDRGIPPDVVTYNTILHGF 281

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  +A   +K+ + +   P  +T+ IL++ +CK+  ++ A  V + M  +G  P+ 
Sbjct: 282 CSLGQLNEATRLFKEMVGRNVMPDTVTFNILVDGLCKEGMVSEARCVSETMTEKGAEPNA 341

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN+L++  C   + D+A+ V+  ++ +G  PN  +YN L++        +   ++L  
Sbjct: 342 YTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAKRLLSE 401

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+E + +P   TY+ L+ GLC+ G    A+N F +M S    PD++ Y+ +L   CK G 
Sbjct: 402 MSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGFCKHGH 461

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EAL+LL  ++     P +I Y  LI G+   G +E A  L+ ++  +GI PD  T+  
Sbjct: 462 LDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDIWTYNV 521

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G  +    +EA +  +++   G    + +Y ++I G  +++    AIQ+++ M+  R
Sbjct: 522 MIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDEMVGKR 581

Query: 533 YKPDDTVFSTIVKKVADD 550
           +  D + F  ++   + D
Sbjct: 582 FSADSSTFQMLLDLESHD 599



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 72/280 (25%), Positives = 131/280 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            E +  T N ++  +C   ++ +A K++ IM  +   P+      LI G  +  R+ +A 
Sbjct: 337 AEPNAYTYNALMDGYCLHNQMDEAIKVLGIMIGKGCAPNLSSYNILINGYCKSKRMNEAK 396

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M      PDT+TY+ ++ GLC+ G+ R A+ L  EM  SG  PD++ Y+ +L   
Sbjct: 397 RLLSEMSEKNLTPDTVTYSTLMQGLCQVGRPREALNLFKEMCSSGLLPDLMAYSILLDGF 456

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G   +A+   K+   +   P +I YTILI  +     +  A E+   ++ +G  PDI
Sbjct: 457 CKHGHLDEALKLLKEMHERRIKPNIILYTILIRGMFIAGKLEVAKELFSKLSADGIRPDI 516

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN ++    K+G  D+A      +   G  P+S +YN ++             +++D 
Sbjct: 517 WTYNVMIKGLLKEGLSDEAYEFFRKMEDDGFLPDSCSYNVIIQGFLQNQDSSTAIQLIDE 576

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           M     S    T+ +L++      ++ R +   +Q    N
Sbjct: 577 MVGKRFSADSSTFQMLLDLESHDEIISRFMRGSSQHTKMN 616



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 105/188 (55%)

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +D A+ SF +MV  N +P +V +   LG++ K+   + A+ L + ++    +  + + N 
Sbjct: 77  IDDALTSFYRMVRMNPRPSVVEFGKFLGSIAKKKQYSSAVSLCNQMDLFGVTHNVYSLNV 136

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+ L +   ++ A+ + G+M + GI PD IT  TLI G C   +++EAV L  E+   G
Sbjct: 137 LINCLCRLSHVDFAVSVMGKMFKLGIQPDAITFNTLINGLCNEGKIKEAVGLFNEMVWSG 196

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           ++    +Y  VI+GLCK+    MA++V   M  +R KP+   ++TI+  +  D +  EA 
Sbjct: 197 HEPNVISYNTVINGLCKNGNTIMAVRVFRKMEQNRGKPNVVTYNTIIDSLCKDRLVNEAV 256

Query: 558 KLWQKLIE 565
           +   ++++
Sbjct: 257 EFLSEMVD 264


>gi|302142099|emb|CBI19302.3| unnamed protein product [Vitis vinifera]
          Length = 609

 Score =  252 bits (644), Expect = 3e-64,   Method: Compositional matrix adjust.
 Identities = 128/337 (37%), Positives = 205/337 (60%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +A K+L  M   G  PD +TYN+++ G+CK G++  AI  L+ M   GC+P+VIT+N 
Sbjct: 98  VGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMPSYGCQPNVITHNI 157

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ILR+M   G++  A     D LRKGC P ++T+ ILI  +C+Q  + RAI++L+ M + G
Sbjct: 158 ILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKMPMHG 217

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           C+P+ ++YN L++  CK+ K D A+  ++ ++SRG  P+ +TYNTLL +L   G  D   
Sbjct: 218 CTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAV 277

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +IL+ ++    SP + TYN +I+GL K G  +RAI   ++M  K  +PDI+TY++++  L
Sbjct: 278 EILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGL 337

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +EG ++EA++  H L G    P  ITYN+++ GL K    ++A+     M+     P +
Sbjct: 338 SREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTE 397

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            T+  LI G       +EA+DLL E+  RG   ++SA
Sbjct: 398 ATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 434



 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 130/350 (37%), Positives = 204/350 (58%), Gaps = 35/350 (10%)

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           ++  ++  CK+ G+ +A+++LD+M  +G  PD+VTYN L+N  CK+G+ D+A+  +NN+ 
Sbjct: 85  FSFYVQTTCKESGVGQAMKLLDEMRNKGSKPDVVTYNVLINGICKEGRLDEAIKFLNNMP 144

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV- 378
           S G +PN IT+N +L S+ S G W   +K+L  M     SP+V T+NILIN LC+ GL+ 
Sbjct: 145 SYGCQPNVITHNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLG 204

Query: 379 ----------------------------------DRAINSFNQMVSKNCQPDIVTYNTVL 404
                                             DRAI   + MVS+ C PDIVTYNT+L
Sbjct: 205 RAIDILEKMPMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLL 264

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            ALCK+G ++ A+++L+ L+   CSP LITYNT+IDGL+K G  E+A+ L  +M   G+ 
Sbjct: 265 TALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLK 324

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD IT+ +L+ G  R  +V+EA+    ++   G +     Y  ++ GLCKS++ D AI  
Sbjct: 325 PDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDF 384

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           L  MIS R KP +  ++ +++ +A +G+ +EA  L  +L    + +K + 
Sbjct: 385 LAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRGLVKKSSA 434



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 103/274 (37%), Positives = 155/274 (56%), Gaps = 2/274 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T+N IL++ CS G+  DA KL+  M R+   P       LI  L R   + +A  +L+ M
Sbjct: 154 THNIILRSMCSTGRWMDAEKLLSDMLRKGCSPSVVTFNILINFLCRQGLLGRAIDILEKM 213

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            M G  P++++YN ++ G CK  ++  AI  LD M   GC PD++TYNT+L  +  +GK 
Sbjct: 214 PMHGCTPNSLSYNPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKV 273

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+        KGC P LITY  +I+ + K     RAI++LD+M  +G  PDI+TY+SL
Sbjct: 274 DVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSL 333

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEAS 357
           V+   ++GK D+A+   ++L   G+ PN+ITYN+++  L  SR    A+D  L  M    
Sbjct: 334 VSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAID-FLAYMISKR 392

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
             PT  TY ILI G+   GL   A++  N++ S+
Sbjct: 393 CKPTEATYTILIEGIAYEGLAKEALDLLNELCSR 426



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 69/203 (33%), Positives = 105/203 (51%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L  FC   K+  A + +DIM  R   PD      L+  L +  +++ A ++L  +  
Sbjct: 226 NPLLHGFCKEKKMDRAIEYLDIMVSRGCYPDIVTYNTLLTALCKDGKVDVAVEILNQLSS 285

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  ITYN ++ GL K G+   AI LLDEM   G +PD+ITY++++  +   GK  +
Sbjct: 286 KGCSPVLITYNTVIDGLSKVGKTERAIKLLDEMRRKGLKPDIITYSSLVSGLSREGKVDE 345

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI F+ D    G  P  ITY  ++  +CK     RAI+ L  M  + C P   TY  L+ 
Sbjct: 346 AIKFFHDLEGLGIRPNAITYNSIMLGLCKSRQTDRAIDFLAYMISKRCKPTEATYTILIE 405

Query: 301 FSCKQGKYDDAVLVINNLLSRGM 323
               +G   +A+ ++N L SRG+
Sbjct: 406 GIAYEGLAKEALDLLNELCSRGL 428



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 52/172 (30%), Positives = 90/172 (52%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C  GK+  A ++++ ++ +   P       +I GL ++ + E+A K+L
Sbjct: 256 DIVTYNTLLTALCKDGKVDVAVEILNQLSSKGCSPVLITYNTVIDGLSKVGKTERAIKLL 315

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD ITY+ +V GL + G++  AI    ++   G  P+ ITYN+I+  +  +
Sbjct: 316 DEMRRKGLKPDIITYSSLVSGLSREGKVDEAIKFFHDLEGLGIRPNAITYNSIMLGLCKS 375

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
            +  +AI F    + K C P   TYTILIE +  +     A+++L+++   G
Sbjct: 376 RQTDRAIDFLAYMISKRCKPTEATYTILIEGIAYEGLAKEALDLLNELCSRG 427


>gi|302758676|ref|XP_002962761.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
 gi|300169622|gb|EFJ36224.1| hypothetical protein SELMODRAFT_165305 [Selaginella moellendorffii]
          Length = 707

 Score =  251 bits (642), Expect = 5e-64,   Method: Compositional matrix adjust.
 Identities = 140/487 (28%), Positives = 252/487 (51%), Gaps = 39/487 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N I+   C  GK   A  L+ +MA RN  P       LI GL +   +++A 
Sbjct: 41  VTPDTVTFNSIMDGLCKAGKFERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAK 100

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++   V SG VPD +TY+++  GLCKRG+I  A  L+ EMS +GC P+++TYNT++  +
Sbjct: 101 TLVDEFVSSGFVPDVVTYSILADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGL 160

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K ++A    +  +  G  P ++TYTI+++ +CK+  + +A+++++ M   GC+P +
Sbjct: 161 CKASKTEKAYELLETLVSSGFVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSV 220

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TY +L+   C+ G+ D+A  +   ++S+    +++ Y +L++            K++D 
Sbjct: 221 ITYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDG 280

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +     +P +  YN L++G CK G +D   N F  M  + C P+I TYN V+  LCK G 
Sbjct: 281 IR---GTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGK 337

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA   L  ++ + C P +++YN +IDGL K    ++A  +  QM++ GI PD +T+ T
Sbjct: 338 VDEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNT 397

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG-----------------------------NKMRN- 502
           L+  FC+ ++ ++AV +LK + K G                               +RN 
Sbjct: 398 LMAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNG 457

Query: 503 ------SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                 + Y  +I  LCK   +  A+ +++ M     + +   ++  + ++  +G  +EA
Sbjct: 458 CVVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEA 517

Query: 557 YKLWQKL 563
             L  ++
Sbjct: 518 SSLLSEM 524



 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 241/484 (49%), Gaps = 33/484 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N ++   C   K   AS+++  M  R   PD     +++ GL +  + E+A 
Sbjct: 6   VAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGKFERAH 65

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L +M      P   TYN ++ GLCK+  +  A  L+DE   SG  PDV+TY+ +   +
Sbjct: 66  SLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSILADGL 125

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  +A    K+    GC P L+TY  LI+ +CK     +A E+L+ +   G  PD+
Sbjct: 126 CKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSGFVPDV 185

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  +V+  CK+G+ D A+ ++  +L RG  P+ ITY  L+  L   G  D    I   
Sbjct: 186 VTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAHHIFKE 245

Query: 353 M-------------------------NEASH-------SPTVFTYNILINGLCKYGLVDR 380
           M                          EA         +P +  YN L++G CK G +D 
Sbjct: 246 MVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRGTPYIDVYNALMDGYCKEGRLDE 305

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
             N F  M  + C P+I TYN V+  LCK G ++EA   L  ++ + C P +++YN +ID
Sbjct: 306 IPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDVVSYNIIID 365

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL K    ++A  +  QM++ GI PD +T+ TL+  FC+ ++ ++AV +LK + K G   
Sbjct: 366 GLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKNMIKAGVDP 425

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVL-ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            N  Y  +I GL ++ ++  A +++ E++ +       T ++TI+ ++  +G  ++A  L
Sbjct: 426 DNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSACTTYNTIIDRLCKEGCLKQALLL 485

Query: 560 WQKL 563
              +
Sbjct: 486 MDHM 489



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 230/426 (53%), Gaps = 3/426 (0%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M  R   PD      LI GL +  + +KAS++L  MV  G  PDT+T+N ++ GLCK G+
Sbjct: 1   MNERKVAPDVFTYNILIDGLCKASKTDKASEMLHEMVDRGVTPDTVTFNSIMDGLCKAGK 60

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
              A +LL  M+   C P   TYNT++  +       +A     + +  G  P ++TY+I
Sbjct: 61  FERAHSLLAVMAERNCRPSCCTYNTLISGLCKQQNVDRAKTLVDEFVSSGFVPDVVTYSI 120

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L + +CK+  I  A E++ +M+  GC+P++VTYN+L++  CK  K + A  ++  L+S G
Sbjct: 121 LADGLCKRGRIDEAFELVKEMSGNGCTPNLVTYNTLIDGLCKASKTEKAYELLETLVSSG 180

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             P+ +TY  ++  L   G  D   K+++ M +   +P+V TY  L+ GLC+ G VD A 
Sbjct: 181 FVPDVVTYTIIVDGLCKEGRLDKALKMVEGMLKRGCTPSVITYTALMEGLCRTGRVDEAH 240

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           + F +MVSK+C  D + Y +++   CK     EA +++  + G   +P +  YN L+DG 
Sbjct: 241 HIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGIRG---TPYIDVYNALMDGY 297

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+G +++   ++  M   G  P+  T+  ++ G C+  +V+EA   L+ +   G     
Sbjct: 298 CKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKVDEAFPFLESMHSAGCVPDV 357

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            +Y ++I GL K+ K   A QVL+ MI +   PD   ++T++ +   +   ++A  + + 
Sbjct: 358 VSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQFCKEERFDDAVGILKN 417

Query: 563 LIEWKV 568
           +I+  V
Sbjct: 418 MIKAGV 423



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/479 (28%), Positives = 241/479 (50%), Gaps = 37/479 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++  C  G++ +A  +   M  ++   D    ++L+ G  +  R ++A KV+  +
Sbjct: 222 TYTALMEGLCRTGRVDEAHHIFKEMVSKDCTADALAYVSLVNGYCKSSRTKEAQKVVDGI 281

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
               G P    YN ++ G CK G++     + ++M+  GC P++ TYN ++  +  +GK 
Sbjct: 282 ---RGTPYIDVYNALMDGYCKEGRLDEIPNVFEDMACRGCVPNIKTYNIVMDGLCKHGKV 338

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A  F +     GC P +++Y I+I+ + K      A +VLD M   G  PD VTYN+L
Sbjct: 339 DEAFPFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTL 398

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG-SRGCWDAVDKILDIMNEAS 357
           +   CK+ ++DDAV ++ N++  G++P+++TYNTL+  L  +    DA + + +++    
Sbjct: 399 MAQFCKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGC 458

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
                 TYN +I+ LCK G + +A+   + M     + + VTYN  +  LCKEG L+EA 
Sbjct: 459 VVSACTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEAS 518

Query: 418 QLLH----LLNGSSCSPCLI-----------------------------TYNTLIDGLAK 444
            LL     L +  S +  +I                             T+N LID   K
Sbjct: 519 SLLSEMDTLRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTK 578

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              +++A+ L   M++ G SP  IT+  +I   C+ D+V++A +L  E+  RG    + +
Sbjct: 579 TKRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVS 638

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           Y ++I+GLC   +   A+QVLE M SS  + DD     +   +   G  EEA +L +++
Sbjct: 639 YTVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 170/358 (47%), Gaps = 13/358 (3%)

Query: 111 PFVEN--------DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGL 162
           PF+E+        D  + N I+       K  +A +++D M +    PD      L+   
Sbjct: 343 PFLESMHSAGCVPDVVSYNIIIDGLFKASKPKEARQVLDQMIQAGIPPDAVTYNTLMAQF 402

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
            + +R + A  +L+ M+ +G  PD +TYN ++ GL +  ++  A  L+ EM  +GC    
Sbjct: 403 CKEERFDDAVGILKNMIKAGVDPDNVTYNTLISGLSQTNRLGDAYELMHEMLRNGCVVSA 462

Query: 223 -ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
             TYNTI+  +   G  KQA+         G     +TY I I+++CK+  +  A  +L 
Sbjct: 463 CTTYNTIIDRLCKEGCLKQALLLMDHMTGHGVEANTVTYNIFIDRLCKEGRLDEASSLLS 522

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS-RGMEPNSITYNTLLHSLGSR 340
           +M       D V+Y +++   CK  + D A  +   +++ +G+   S T+N L+ +    
Sbjct: 523 EMDT---LRDEVSYTTVIIGLCKAEQLDRASKLAREMVAVKGLCITSHTFNLLIDAFTKT 579

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
              D    +L++M +   SP+V TYN++I  LCK   VD+A   F++M  +      V+Y
Sbjct: 580 KRLDEALTLLELMVQRGCSPSVITYNMVITCLCKLDKVDKAWELFDEMAVRGIVASSVSY 639

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
             ++  LC +G   EALQ+L  +  S C    +    L   L  +G  E+A  L  +M
Sbjct: 640 TVLIYGLCGQGRGKEALQVLEEMASSDCEIDDLKCRKLYLALRGQGRGEEAAELLRRM 697



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 107/213 (50%), Gaps = 4/213 (1%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  VE +  T N  +   C  G+L +AS L+  M   + + D      +I GL + ++++
Sbjct: 491 GHGVEANTVTYNIFIDRLCKEGRLDEASSLLSEM---DTLRDEVSYTTVIIGLCKAEQLD 547

Query: 170 KASKVLQIMVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           +ASK+ + MV   G+  T  T+N+++    K  ++  A+ LL+ M   GC P VITYN +
Sbjct: 548 RASKLAREMVAVKGLCITSHTFNLLIDAFTKTKRLDEALTLLELMVQRGCSPSVITYNMV 607

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +    K  +A   + +   +G     ++YT+LI  +C Q     A++VL++MA   C
Sbjct: 608 ITCLCKLDKVDKAWELFDEMAVRGIVASSVSYTVLIYGLCGQGRGKEALQVLEEMASSDC 667

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
             D +    L      QG+ ++A  ++  + ++
Sbjct: 668 EIDDLKCRKLYLALRGQGRGEEAAELLRRMTTK 700


>gi|224061569|ref|XP_002300545.1| predicted protein [Populus trichocarpa]
 gi|222847803|gb|EEE85350.1| predicted protein [Populus trichocarpa]
          Length = 567

 Score =  250 bits (639), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 130/476 (27%), Positives = 252/476 (52%), Gaps = 34/476 (7%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           +L DA   ++ + R+   PD      L+  L + ++++KA++V+++ + SG +PD  +Y 
Sbjct: 77  RLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSNKMKKATRVMEMTIESGIIPDAASYT 136

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            +V  LCKRG I  A+ L+++M  +GC  + +TYN+++R +  +G   Q++      +RK
Sbjct: 137 FLVNNLCKRGNIGYAMQLVEKMEENGCPTNTVTYNSLVRGLCKHGNLNQSLQLLDKLMRK 196

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P   T++ L+E   K+ G+  A+++LD +  +G  P++V+YN L+   CK+G+ ++A
Sbjct: 197 GLVPNEFTHSFLLEAAYKERGVDEAMKLLDGIIAKGGKPNLVSYNVLLTGLCKEGRTEEA 256

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           +    +L S+G  PN ++ N +L SL   G W+  ++++  M+    SP++ TYNILI  
Sbjct: 257 IQFFRDLPSKGFNPNVVSCNIILRSLCCEGRWEEANELVAEMDSEERSPSLVTYNILIGS 316

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           L  +G +  A    ++M+  + QP   T+N ++  LCKEG  +  ++ L  +    C+P 
Sbjct: 317 LASHGRIQHAFQVLDEMMRASFQPSAATFNPIISHLCKEGKADLVVKCLDQMIHHCCNPN 376

Query: 432 LITYNTL----------------------------------IDGLAKKGCMEKAMVLYGQ 457
             T+N +                                  I  L +KG    A  L  +
Sbjct: 377 DGTFNAIAVLCEGGRVQRAFSIIQSLGNKQNSSTHDFYRGVISSLCRKGNTYPAFQLLYE 436

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+++G  PD  T+ +LI G C    ++EA+++ + + +   +     +  +I G CKS +
Sbjct: 437 MIQSGFVPDPYTYSSLIRGLCVEGMLDEALEIFRLLEENDYRPILGNFNALILGFCKSGR 496

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
            D+++++ E+MI   Y P++T ++ +V+ +A +   E A ++ ++L   +V  + T
Sbjct: 497 TDLSLEIFEMMILKGYTPNETTYTILVEGIAHEEEKELAAEVLKELYIRQVMRRNT 552



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/392 (28%), Positives = 200/392 (51%), Gaps = 1/392 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C  G L  + +L+D + R+  +P+      L+    +   +++A K+L  +
Sbjct: 169 TYNSLVRGLCKHGNLNQSLQLLDKLMRKGLVPNEFTHSFLLEAAYKERGVDEAMKLLDGI 228

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  GG P+ ++YN+++ GLCK G+   AI    ++   G  P+V++ N ILR++   G++
Sbjct: 229 IAKGGKPNLVSYNVLLTGLCKEGRTEEAIQFFRDLPSKGFNPNVVSCNIILRSLCCEGRW 288

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     +   +   P L+TY ILI  +     I  A +VLD+M      P   T+N +
Sbjct: 289 EEANELVAEMDSEERSPSLVTYNILIGSLASHGRIQHAFQVLDEMMRASFQPSAATFNPI 348

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+GK D  V  ++ ++     PN  T+N +   L   G       I+  +    +
Sbjct: 349 ISHLCKEGKADLVVKCLDQMIHHCCNPNDGTFNAIA-VLCEGGRVQRAFSIIQSLGNKQN 407

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S T   Y  +I+ LC+ G    A     +M+     PD  TY++++  LC EGML+EAL+
Sbjct: 408 SSTHDFYRGVISSLCRKGNTYPAFQLLYEMIQSGFVPDPYTYSSLIRGLCVEGMLDEALE 467

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +  LL  +   P L  +N LI G  K G  + ++ ++  M+  G +P++ T+  L+ G  
Sbjct: 468 IFRLLEENDYRPILGNFNALILGFCKSGRTDLSLEIFEMMILKGYTPNETTYTILVEGIA 527

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
             ++ E A ++LKE+  R    RN+  RLV+ 
Sbjct: 528 HEEEKELAAEVLKELYIRQVMRRNTVERLVMQ 559



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 30/109 (27%), Positives = 52/109 (47%), Gaps = 6/109 (5%)

Query: 463 ISPDDITHRTLIWGFCRAD------QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           ISP D       W   R D      ++ +A   L+ I ++G+K   +    +++ LCKS 
Sbjct: 52  ISPKDSVWTLSNWKVGRKDTRNRDIRLNDAFFHLEFIVRKGHKPDVAQATQLLYDLCKSN 111

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K+  A +V+E+ I S   PD   ++ +V  +   G    A +L +K+ E
Sbjct: 112 KMKKATRVMEMTIESGIIPDAASYTFLVNNLCKRGNIGYAMQLVEKMEE 160


>gi|326490085|dbj|BAJ94116.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 641

 Score =  250 bits (638), Expect = 1e-63,   Method: Compositional matrix adjust.
 Identities = 133/456 (29%), Positives = 242/456 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  +  T   I+++ C+RG + DA  ++D M  R        C  ++    R      A 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           + LQ++   G   D+   N++V  +C++G +   + LL ++   GCEPD+++YN +L+ +
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               ++        + +R GCPP + T+  LI  +C+     +  E L  M   GC+PD+
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y ++++  CK G ++ A  +++ + S G++PN + YNT+L  L S   W+  + +L  
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +        T+NIL++  C+ GLVDR I    QM+   C PD++TY TV+   CKEG+
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA+ LL  ++   C P  I+Y  ++ GL +      A  L   M++ G  P+ +T  T
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNT 463

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI   C+   VE+A++LLK++   G      +Y  VI GL K+ K + A+++L +MI+  
Sbjct: 464 LINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKG 523

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             P+  ++S++   ++ +G T++  +++  + +  V
Sbjct: 524 ITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATV 559



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 121/419 (28%), Positives = 214/419 (51%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  + N +L+  C   +  D  +L+  M R    P+      LI  L R    E+  +
Sbjct: 210 EPDIVSYNAVLKGLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHE 269

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            L  M   G  PD   Y  ++ G+CK G    A  +L  M   G +P+V+ YNT+L+ + 
Sbjct: 270 ALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLC 329

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              ++++A     +  ++ CP   +T+ IL++  C+   + R IE+L+ M   GC PD++
Sbjct: 330 SAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVI 389

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +++N  CK+G  D+AV+++ N+ + G +PN+I+Y  +L  L     W    +++  M
Sbjct: 390 TYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHM 449

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P   T+N LIN +CK GLV++AI    QM+   C PD+++Y+TV+  L K G  
Sbjct: 450 IQQGCLPNPVTFNTLINFMCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKT 509

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EAL+LL+++     +P  I Y+++   L+++G  +K + ++  + +  +  D   +  +
Sbjct: 510 EEALELLNVMINKGITPNTIIYSSMASALSREGRTDKIIQMFDSIQDATVRSDAALYNAV 569

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           I   C+  + + A+D    +   G     S Y ++I GL     V  A  +L  + S R
Sbjct: 570 ISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGLASEGLVREAQDLLSELCSRR 628



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 231/444 (52%), Gaps = 6/444 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++++ C+ G+  DA++ +D       +  ++    +I G  R  ++  A ++   + +
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAGVVAYN---AMIAGYCRAGQVAAARRLAAAVPV 104

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P+  TY  +V  LC RG I  A+ +LDEM + GC       + IL      G F+ 
Sbjct: 105 P---PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +    KGC        +++  +C+Q  +   +E+L  +   GC PDIV+YN+++ 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C   ++DD   ++  ++  G  PN  T+NTL+  L   G ++ V + L  M E   +P
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTP 281

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +  Y  +I+G+CK G  + A +  ++M S   +P++V YNTVL  LC      EA  LL
Sbjct: 282 DLRMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLL 341

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C    +T+N L+D   + G +++ + L  QM+E+G  PD IT+ T+I GFC+ 
Sbjct: 342 AEMFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKE 401

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             V+EAV LLK +   G K    +Y +V+ GLC++++   A +++  MI     P+   F
Sbjct: 402 GLVDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 461

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           +T++  +   G+ E+A +L ++++
Sbjct: 462 NTLINFMCKKGLVEQAIELLKQML 485



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 199/418 (47%), Gaps = 6/418 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LIR L    R   A++ L     + GV   + YN M+ G C+ GQ+ +A  L   + V  
Sbjct: 50  LIRSLCAAGRTADAARALDTAGDAAGV---VAYNAMIAGYCRAGQVAAARRLAAAVPVP- 105

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P+  TY  I+R++   G    A+    +   +GC        +++E  C+  G   A+
Sbjct: 106 --PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
             L  +  +GC+ D    N +V+  C+QG  D+ V ++  L S G EP+ ++YN +L  L
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                WD V++++  M      P V T+N LI  LC+ GL ++   + +QM    C PD+
Sbjct: 224 CMAKRWDDVEELMVEMVRVGCPPNVATFNTLIAYLCRNGLFEQVHEALSQMPEHGCTPDL 283

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
             Y T++  +CK+G    A  +L  +      P ++ YNT++ GL      E+A  L  +
Sbjct: 284 RMYATIIDGICKDGHHEVANDILSRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAE 343

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M +     DD+T   L+  FC+   V+  ++LL+++ + G       Y  VI+G CK   
Sbjct: 344 MFQEDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGL 403

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           VD A+ +L+ M +   KP+   ++ ++K +       +A +L   +I+        T 
Sbjct: 404 VDEAVMLLKNMSACGCKPNTISYTIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTF 461


>gi|302821481|ref|XP_002992403.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
 gi|300139819|gb|EFJ06553.1| hypothetical protein SELMODRAFT_42645 [Selaginella moellendorffii]
          Length = 448

 Score =  249 bits (637), Expect = 2e-63,   Method: Compositional matrix adjust.
 Identities = 137/449 (30%), Positives = 232/449 (51%), Gaps = 36/449 (8%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  L+   +R  + ++A  + +  +     PD+ITY+ ++ G CK    + A  LLDEM 
Sbjct: 1   CNCLLSAFVRKKKAQEAYDLFKNHLCGLCSPDSITYSTLINGFCKARDFQQAYRLLDEME 60

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G  P    YNTI++ + DNG+   A+  ++D +++ C P +ITYTIL++ +CK   I+
Sbjct: 61  KRGIVPHNAVYNTIIKGLCDNGRVDSALVHYRD-MQRHCAPSVITYTILVDALCKSARIS 119

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR------------- 321
            A  +L+DM   GC+P++VTYN+L+N  CK G  D+AV++ N +L               
Sbjct: 120 DASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQMLENSCSPDVFTYNILI 179

Query: 322 ----------------------GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
                                 G EPN ITYNTL+ SL   G +     +  +M      
Sbjct: 180 DGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKYIDAFNLAQMMLRRDCK 239

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P+ FT+N++I+  CK G +D A   F  M  + C PDI TYN ++   C+   +++A QL
Sbjct: 240 PSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIMISGACRANRIDDARQL 299

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +  + C P ++TYN+++ GL K   +++A  +Y  +   G   D +T  TLI G C+
Sbjct: 300 LERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGYFLDVVTCSTLIDGLCK 359

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           + ++++A  LL+E+ + G+     AY ++IHG CK+ ++D ++     M+     P    
Sbjct: 360 SRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLAFFSEMLDKGCVPTVIT 419

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +S ++ K+       +   L + ++E  V
Sbjct: 420 YSIVIDKLCKSARVRDGCMLLKTMLERGV 448



 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 131/414 (31%), Positives = 216/414 (52%), Gaps = 1/414 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  FC       A +L+D M +R  +P       +I+GL    R++ A    
Sbjct: 32  DSITYSTLINGFCKARDFQQAYRLLDEMEKRGIVPHNAVYNTIIKGLCDNGRVDSALVHY 91

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      P  ITY ++V  LCK  +I  A  +L++M  +GC P+V+TYNT++      
Sbjct: 92  RDM-QRHCAPSVITYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKL 150

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+  +   L   C P + TY ILI+  CKQ       ++L +M   GC P+ +TY
Sbjct: 151 GNMDEAVVLFNQMLENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITY 210

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++   K GKY DA  +   +L R  +P+  T+N ++      G  D   ++  +M +
Sbjct: 211 NTLMDSLVKSGKYIDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTD 270

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P ++TYNI+I+G C+   +D A     +M    C PD+VTYN+++  LCK   ++E
Sbjct: 271 RGCLPDIYTYNIMISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDE 330

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A ++  +L        ++T +TLIDGL K   ++ A  L  +M  NG +PD + +  LI 
Sbjct: 331 AYEVYEVLRNGGYFLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIH 390

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           GFC+ADQ+++++    E+  +G       Y +VI  LCKS +V     +L+ M+
Sbjct: 391 GFCKADQLDKSLAFFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTML 444



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 98/345 (28%), Positives = 174/345 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C   +++DAS +++ M      P+      LI G  ++  +++A  +   M
Sbjct: 104 TYTILVDALCKSARISDASLILEDMIEAGCAPNVVTYNTLINGFCKLGNMDEAVVLFNQM 163

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +   PD  TYN+++ G CK+ + +    LL EM   GCEP+ ITYNT++ ++  +GK+
Sbjct: 164 LENSCSPDVFTYNILIDGYCKQERPQDGAKLLQEMVKYGCEPNFITYNTLMDSLVKSGKY 223

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    +  LR+ C P   T+ ++I+  CK   +  A E+   M   GC PDI TYN +
Sbjct: 224 IDAFNLAQMMLRRDCKPSHFTFNLMIDMFCKVGQLDLAYELFQLMTDRGCLPDIYTYNIM 283

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++ +C+  + DDA  ++  +   G  P+ +TYN+++  L      D   ++ +++    +
Sbjct: 284 ISGACRANRIDDARQLLERMTEAGCPPDVVTYNSIVSGLCKASQVDEAYEVYEVLRNGGY 343

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              V T + LI+GLCK   +D A     +M      PD+V Y  ++   CK   L+++L 
Sbjct: 344 FLDVVTCSTLIDGLCKSRRLDDAEKLLREMERNGSAPDVVAYTILIHGFCKADQLDKSLA 403

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
               +    C P +ITY+ +ID L K   +    +L   M+E G+
Sbjct: 404 FFSEMLDKGCVPTVITYSIVIDKLCKSARVRDGCMLLKTMLERGV 448


>gi|302795346|ref|XP_002979436.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
 gi|300152684|gb|EFJ19325.1| hypothetical protein SELMODRAFT_177686 [Selaginella moellendorffii]
          Length = 500

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 232/417 (55%), Gaps = 6/417 (1%)

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           DF    +LI+GL ++ R+E+A   L  MV  G  PD  TY  ++  LC   ++  A   L
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
           +EM+     P+V+TY  ++  +   G+  +A+     ++RK C P  +TY  LI  +CK 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLS-KMRKKCVPTAVTYNSLISGLCKA 128

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
              + A ++L++M   GC PDI TY +L+   CK  K DDA+ V   L++RG  P+ +TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 331 NTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           + L+  L   G   +A+D    ++   S  P   TYN LI+G C+ G +D A+N   +M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
                PD+VTY T++   CK   L++A  LL+ +     +P ++T+ +L+DGL ++  + 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD-LLKEIGKRGNKMRNSAYRLV 508
            A+ + G+M     SP   T+ T++ G+CRA+Q+EEA   +L+E+    N +   ++ ++
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVV---SFNIM 365

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           I GLCK  +   A++++E     R  PD  +++T++  +  +   +EA ++++K++E
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422



 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 139/449 (30%), Positives = 234/449 (52%), Gaps = 5/449 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++Q  C   +L  A   +  M  +   PD +    +I  L   +R+ +A K L
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      P+ +TY +++ GLCK G++  A+ALL +M    C P  +TYN+++  +   
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKA 128

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A    ++ +  GC P + TYT LI   CK      A+ V + +   G  PD+VTY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           + L++  CK+G+  +A+ +   ++  G   PN++TYN+L+      G  D    +L+ M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E   SP V TY  L+NG CK   +D A +  NQM  K   PD+VT+ +++  LC+E  L+
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A+ +L  +   SCSP + TYNT++DG  +   +E+A     + M+    P+ ++   +I
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMI 366

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR-Y 533
            G C+ ++  EA++L++E  +R        Y  VI GLC+ KKVD A +V   M+     
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            P+   +ST+V  + + GM + A    +K
Sbjct: 427 LPNSITYSTLVTGLCNAGMLDRARGYIEK 455



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 124/413 (30%), Positives = 224/413 (54%), Gaps = 9/413 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G++ +A  L+  M R+  +P      +LI GL + +R  +A  +L+ M
Sbjct: 83  TYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEM 141

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V SG +PD  TY  ++ G CK  +   A+ + +++   G  PDV+TY+ ++  +   G+ 
Sbjct: 142 VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRL 201

Query: 239 KQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           K+AI  +   ++ G C P  +TY  LI   C+   +  A+ +L+ MA  G SPD+VTY +
Sbjct: 202 KEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 261

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK  + DDA  ++N +  +G+ P+ +T+ +L+  L           IL  M   S
Sbjct: 262 LMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SPTV+TYN +++G C+   ++ A   F  +   +C P++V++N ++  LCK    +EA+
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEA-RKF-MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAM 379

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWG 476
           +L+       C+P ++ Y T+IDGL ++  +++A  +Y +M+E  G  P+ IT+ TL+ G
Sbjct: 380 ELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLVTG 439

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
            C A  ++ A   +    ++G       Y L+I    K+ + + A ++L+ M+
Sbjct: 440 LCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMV 488



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 196/352 (55%), Gaps = 8/352 (2%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           ++ + C  D +TY ++++ +    + +QA+ F    + KG  P + TYT +I  +C +  
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           +  A + L++MA    +P++VTY  L++  CK G+ D+AV +++ +  + + P ++TYN+
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNS 120

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           L+  L      +   +  D++ E  +S   P +FTY  LI G CK    D A+  F Q+V
Sbjct: 121 LISGLCK---AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 177

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           ++  +PD+VTY+ ++  LCKEG L EA+ L   ++   SC P  +TYN+LI G  + G M
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           ++AM L  +M E G SPD +T+ TL+ GFC+  ++++A DLL ++ ++G       +  +
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           + GLC+  ++  A+ +L  M      P    ++TI+         EEA K  
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 176/378 (46%), Gaps = 35/378 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   + ++A  L++ M     IPD      LI G  +  + + A +V + +
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNGK 237
           V  G  PD +TY+ ++ GLCK G+++ AI L   M  SG C P+ +TYN+++      GK
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+   +     G  P ++TYT L+   CK   +  A ++L+ M  +G +PD+VT+ S
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C++ +  DAV ++  +  +   P   TYNT+L         +   K +  + E  
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V ++NI+I GLCK      A+    +   + C PD+V Y TV+  LC+E  ++EA 
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 418 QLLH-----------------LLNG---------------SSCSPCLITYNTLIDGLAKK 445
           ++                   L+ G                 C P + TYN LID   K 
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLVTGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKA 474

Query: 446 GCMEKAMVLYGQMMENGI 463
              E A  L   M++ G 
Sbjct: 475 NRDEDARELLDDMVQRGF 492



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 153/282 (54%), Gaps = 2/282 (0%)

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           +A   CS D VTY SL+   CK  + + A++ +  ++S+G  P+  TY  ++H+L     
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                K L+ M   + +P V TY +LI+GLCK G VD A+   ++M  K C P  VTYN+
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNS 120

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LCK    +EA  LL  +  S C P + TY TLI G  K    + A+ ++ Q++  G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMA 521
             PD +T+  LI G C+  +++EA+DL   + K G+ M N+  Y  +I G C+  K+D A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + +LE M  +   PD   ++T++         ++AY L  ++
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 122/209 (58%), Gaps = 1/209 (0%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           S S    TY  LI GLCK   +++A+    +MVSK   PD+ TY  V+ ALC E  L+EA
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            + L  +   + +P ++TY  LIDGL K G +++A+ L  +M +  + P  +T+ +LI G
Sbjct: 66  RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISG 124

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C+A++  EA DLL+E+   G       Y  +I G CKSKK D A++V E +++  ++PD
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +S ++  +  +G  +EA  L+ ++I+
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213


>gi|302757245|ref|XP_002962046.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
 gi|300170705|gb|EFJ37306.1| hypothetical protein SELMODRAFT_76034 [Selaginella moellendorffii]
          Length = 465

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 247/446 (55%), Gaps = 8/446 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  F  +G+  D  +L++ MA R+  P+      L+ GL +++R  +A ++++ M
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71

Query: 179 VMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
           +  GG   PD +TY+ ++ G CK G++  +  LL E+   G  PD + Y  ++ ++  + 
Sbjct: 72  ISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVVASLCKSA 131

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +  +A+   ++ +R GC P LIT+  LI   C++  +  A  +L  MA  G   D+VTYN
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAASGVKADVVTYN 191

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L++  CK G+  +A  ++  + + G  P+ + Y++ ++ L   G      ++L+ M ++
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLDAHQVLEQMRDS 251

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNE 415
            H P V TYN +++GLCK G +D A+    QM S + C  ++V Y+TV+  LCK G   E
Sbjct: 252 HHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  ++  +  + C P ++TY++L++GL K G +E+A+    +M   G  P+ +T+ +L+ 
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRN-----SAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           G C   ++ EA  +++E+   G    +     S Y  +I GLCK+ ++D A++  + M S
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGHHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEA 556
               PD   +STIV+ +A  G   +A
Sbjct: 432 QGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 222/423 (52%), Gaps = 10/423 (2%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDPSLPSSD----GPFVENDEKTNNKILQNFCSRGKLTDA 136
           + +V++ N  L GL   ++ H+      D    G     D  T + +L  +C  GK+ ++
Sbjct: 42  QPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEES 101

Query: 137 SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGG 196
            +L+  +  R   PD      ++  L +  R+ +A ++L+ M+ +G  P  IT+N ++ G
Sbjct: 102 RELLKEVISRGLRPDALMYTKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISG 161

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
            C+   +  A +LL +M+ SG + DV+TYNT++  +   G+ ++A    +     GC P 
Sbjct: 162 CCREKNLEMADSLLQKMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           ++ Y+  +  +CK   +  A +VL+ M      P++VTYN++++  CK GK D A+ ++ 
Sbjct: 222 VVAYSSFVYGLCKSGKVLDAHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMME 281

Query: 317 NLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
            + S  G   N + Y+T++  L   G       +++ M  A   P V TY+ L+NGLCK 
Sbjct: 282 QMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKA 341

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL-----NGSSCSP 430
           G ++ A+ +  +M  + C+P+ VTY +++  LC  G L EA +++  +      G  C P
Sbjct: 342 GKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGHHCPP 401

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            + TYN LI GL K G ++ A+  + +M   G  PD +++ T++ G  R+ +  +A  +L
Sbjct: 402 SVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQAEMIL 461

Query: 491 KEI 493
            E+
Sbjct: 462 SEV 464



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 205/389 (52%), Gaps = 3/389 (0%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  +G  P+++T+N +V G  K+G+      LL+ M+    +P+V++YN +L  +    +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARDIQPNVVSYNGLLEGLCKLER 60

Query: 238 FKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           + +A    +D + +G    P ++TY+ L+   CK   +  + E+L ++   G  PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDMVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             +V   CK  +  +A+ ++  ++  G  P  IT+NTL+         +  D +L  M  
Sbjct: 121 TKVVASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQKMAA 180

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +     V TYN L++GLCK G +  A     +M +  C PD+V Y++ +  LCK G + +
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLD 240

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NGISPDDITHRTLI 474
           A Q+L  +  S   P ++TYNT++DGL K G ++ A+ +  QM   +G   + + + T++
Sbjct: 241 AHQVLEQMRDSHHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+  + +EA  +++ + + G +     Y  +++GLCK+ K++ A++ +  M     K
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           P+   + ++V  +   G   EA ++ +++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEM 389


>gi|302775252|ref|XP_002971043.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
 gi|300161025|gb|EFJ27641.1| hypothetical protein SELMODRAFT_94769 [Selaginella moellendorffii]
          Length = 457

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 135/446 (30%), Positives = 246/446 (55%), Gaps = 8/446 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  F  +G+  D  +L++ MA R   P+      L+ GL +++R  +A ++++ M
Sbjct: 12  TFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLERWHEAEELVRDM 71

Query: 179 VMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
           +  GG   PD +TY+ ++ G CK G++  +  LL E+   G  PD + Y  ++ ++  + 
Sbjct: 72  ISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMYTKVMASLCKSA 131

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +  +A+   ++ +R GC P LIT+  LI   C++  +  A  +L  MA  G   D+VTYN
Sbjct: 132 RLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAASGVKADVVTYN 191

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L++  CK G+  +A  ++  + + G  P+ + Y++ ++ L   G      ++L+ M ++
Sbjct: 192 TLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLNAHQVLEQMRDS 251

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNE 415
            H P V TYN +++GLCK G +D A+    QM S + C  ++V Y+TV+  LCK G   E
Sbjct: 252 DHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVVDGLCKLGRTQE 311

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  ++  +  + C P ++TY++L++GL K G +E+A+    +M   G  P+ +T+ +L+ 
Sbjct: 312 ARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCKPNAVTYCSLVH 371

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRN-----SAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           G C   ++ EA  +++E+   G    +     S Y  +I GLCK+ ++D A++  + M S
Sbjct: 372 GLCSCGRLAEAERMVEEMSSGGGGGDHCPPSVSTYNALIGGLCKAGRIDDALKFFQRMRS 431

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEA 556
               PD   +STIV+ +A  G   +A
Sbjct: 432 QGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 217/416 (52%), Gaps = 10/416 (2%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDPSLPSSD----GPFVENDEKTNNKILQNFCSRGKLTDA 136
           + +V++ N  L GL   ++ H+      D    G     D  T + +L  +C  GK+ ++
Sbjct: 42  QPNVVSYNGLLEGLCKLERWHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEES 101

Query: 137 SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGG 196
            +L+  +  R   PD      ++  L +  R+ +A ++L+ M+ +G  P  IT+N ++ G
Sbjct: 102 RELLKEVISRGLRPDALMYTKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISG 161

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
            C+   +  A +LL  M+ SG + DV+TYNT++  +   G+ ++A    +     GC P 
Sbjct: 162 CCREKNLEMADSLLQTMAASGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPD 221

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           ++ Y+  +  +CK   +  A +VL+ M      P++VTYN++++  CK GK D A+ ++ 
Sbjct: 222 VVAYSSFVYGLCKSGKVLNAHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMME 281

Query: 317 NLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
            + S  G   N + Y+T++  L   G       +++ M  A   P V TY+ L+NGLCK 
Sbjct: 282 QMASSDGCGLNVVGYSTVVDGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKA 341

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS-----CSP 430
           G ++ A+ +  +M  + C+P+ VTY +++  LC  G L EA +++  ++        C P
Sbjct: 342 GKIEEAVEAVREMAMEGCKPNAVTYCSLVHGLCSCGRLAEAERMVEEMSSGGGGGDHCPP 401

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            + TYN LI GL K G ++ A+  + +M   G  PD +++ T++ G  R+ +  +A
Sbjct: 402 SVSTYNALIGGLCKAGRIDDALKFFQRMRSQGCDPDGVSYSTIVEGLARSGRALQA 457



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 205/389 (52%), Gaps = 3/389 (0%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  +G  P+++T+N +V G  K+G+      LL+ M+  G +P+V++YN +L  +    +
Sbjct: 1   MDRTGCPPNSVTFNALVNGFSKQGRPGDCERLLETMAARGIQPNVVSYNGLLEGLCKLER 60

Query: 238 FKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           + +A    +D + +G    P L+TY+ L+   CK   +  + E+L ++   G  PD + Y
Sbjct: 61  WHEAEELVRDMISRGGRSTPDLVTYSTLLSGYCKAGKVEESRELLKEVISRGLRPDALMY 120

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             ++   CK  +  +A+ ++  ++  G  P  IT+NTL+         +  D +L  M  
Sbjct: 121 TKVMASLCKSARLGEALELLEEMIRAGCCPTLITFNTLISGCCREKNLEMADSLLQTMAA 180

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +     V TYN L++GLCK G +  A     +M +  C PD+V Y++ +  LCK G +  
Sbjct: 181 SGVKADVVTYNTLMDGLCKAGRLQEAEQLLERMKASGCAPDVVAYSSFVYGLCKSGKVLN 240

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NGISPDDITHRTLI 474
           A Q+L  +  S   P ++TYNT++DGL K G ++ A+ +  QM   +G   + + + T++
Sbjct: 241 AHQVLEQMRDSDHDPNVVTYNTILDGLCKSGKIDTALEMMEQMASSDGCGLNVVGYSTVV 300

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+  + +EA  +++ + + G +     Y  +++GLCK+ K++ A++ +  M     K
Sbjct: 301 DGLCKLGRTQEARSVMEAMARAGCRPDVVTYSSLVNGLCKAGKIEEAVEAVREMAMEGCK 360

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           P+   + ++V  +   G   EA ++ +++
Sbjct: 361 PNAVTYCSLVHGLCSCGRLAEAERMVEEM 389


>gi|302792252|ref|XP_002977892.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
 gi|300154595|gb|EFJ21230.1| hypothetical protein SELMODRAFT_107734 [Selaginella moellendorffii]
          Length = 500

 Score =  249 bits (635), Expect = 4e-63,   Method: Compositional matrix adjust.
 Identities = 133/417 (31%), Positives = 232/417 (55%), Gaps = 6/417 (1%)

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           DF    +LI+GL ++ R+E+A   L  MV  G  PD  TY  ++  LC   ++  A   L
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
           +EM+     P+V+TY  ++  +   G+  +A+     ++RK C P  +TY  LI  +CK 
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLS-KMRKKCVPTAVTYNSLISGLCKA 128

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
              + A ++L++M   GC PDI TY +L+   CK  K DDA+ V   L++RG  P+ +TY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 331 NTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           + L+  L   G   +A+D    ++   S  P   TYN LI+G C+ G +D A+N   +M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
                PD+VTY T++   CK   L++A  LL+ +     +P ++T+ +L+DGL ++  + 
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD-LLKEIGKRGNKMRNSAYRLV 508
            A+ + G+M     SP   T+ T++ G+CRA+Q+EEA   +L+E+    N +   ++ ++
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMDCPPNVV---SFNIM 365

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           I GLCK  +   A++++E     R  PD  +++T++  +  +   +EA ++++K++E
Sbjct: 366 IRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLE 422



 Score =  246 bits (628), Expect = 3e-62,   Method: Compositional matrix adjust.
 Identities = 138/449 (30%), Positives = 234/449 (52%), Gaps = 5/449 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++Q  C   +L  A   +  M  +   PD +    +I  L   +R+ +A K L
Sbjct: 10  DFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEARKFL 69

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      P+ +TY +++ GLCK G++  A+ALL +M    C P  +TYN+++  +   
Sbjct: 70  EEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMR-KKCVPTAVTYNSLISGLCKA 128

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A    ++ +  GC P + TYT LI   CK      A+ V + +   G  PD+VTY
Sbjct: 129 ERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTY 188

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           + L++  CK+G+  +A+ +   ++  G   PN++TYN+L+      G  D    +L+ M 
Sbjct: 189 SCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMA 248

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E   SP V TY  L+NG CK   +D A +  NQM  K   PD+VT+ +++  LC+E  L+
Sbjct: 249 ETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLS 308

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A+ +L  +   SCSP + TYNT++DG  +   +E+A     + M+    P+ ++   +I
Sbjct: 309 DAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFMLEEMD--CPPNVVSFNIMI 366

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR-Y 533
            G C+ ++  EA++L++E  +R        Y  VI GLC+ KKVD A +V   M+     
Sbjct: 367 RGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGC 426

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            P+   +ST++  + + GM + A    +K
Sbjct: 427 LPNSITYSTLITGLCNAGMLDRARGYIEK 455



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 224/413 (54%), Gaps = 9/413 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G++ +A  L+  M R+  +P      +LI GL + +R  +A  +L+ M
Sbjct: 83  TYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNSLISGLCKAERASEAYDLLEEM 141

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V SG +PD  TY  ++ G CK  +   A+ + +++   G  PDV+TY+ ++  +   G+ 
Sbjct: 142 VYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRL 201

Query: 239 KQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           K+AI  +   ++ G C P  +TY  LI   C+   +  A+ +L+ MA  G SPD+VTY +
Sbjct: 202 KEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTT 261

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK  + DDA  ++N +  +G+ P+ +T+ +L+  L           IL  M   S
Sbjct: 262 LMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSLMDGLCRENRLSDAVHILGEMRRKS 321

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SPTV+TYN +++G C+   ++ A   F  +   +C P++V++N ++  LCK    +EA+
Sbjct: 322 CSPTVYTYNTILDGYCRANQLEEA-RKF-MLEEMDCPPNVVSFNIMIRGLCKVNRSSEAM 379

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWG 476
           +L+       C+P ++ Y T+IDGL ++  +++A  +Y +M+E  G  P+ IT+ TLI G
Sbjct: 380 ELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEACRVYRKMLEEPGCLPNSITYSTLITG 439

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
            C A  ++ A   +    ++G       Y L+I    K+ + + A ++L+ M+
Sbjct: 440 LCNAGMLDRARGYI----EKGCVPNIGTYNLLIDAFRKANRDEDARELLDDMV 488



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 111/352 (31%), Positives = 196/352 (55%), Gaps = 8/352 (2%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           ++ + C  D +TY ++++ +    + +QA+ F    + KG  P + TYT +I  +C +  
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           +  A + L++MA    +P++VTY  L++  CK G+ D+AV +++ +  + + P ++TYN+
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNS 120

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           L+  L      +   +  D++ E  +S   P +FTY  LI G CK    D A+  F Q+V
Sbjct: 121 LISGLCK---AERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLV 177

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           ++  +PD+VTY+ ++  LCKEG L EA+ L   ++   SC P  +TYN+LI G  + G M
Sbjct: 178 ARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKM 237

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           ++AM L  +M E G SPD +T+ TL+ GFC+  ++++A DLL ++ ++G       +  +
Sbjct: 238 DEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTSL 297

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           + GLC+  ++  A+ +L  M      P    ++TI+         EEA K  
Sbjct: 298 MDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 176/378 (46%), Gaps = 35/378 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   + ++A  L++ M     IPD      LI G  +  + + A +V + +
Sbjct: 117 TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 176

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNGK 237
           V  G  PD +TY+ ++ GLCK G+++ AI L   M  SG C P+ +TYN+++      GK
Sbjct: 177 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 236

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+   +     G  P ++TYT L+   CK   +  A ++L+ M  +G +PD+VT+ S
Sbjct: 237 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPDVVTFTS 296

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C++ +  DAV ++  +  +   P   TYNT+L         +   K +  + E  
Sbjct: 297 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM--LEEMD 354

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V ++NI+I GLCK      A+    +   + C PD+V Y TV+  LC+E  ++EA 
Sbjct: 355 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCREKKVDEAC 414

Query: 418 QLLH-----------------LLNG---------------SSCSPCLITYNTLIDGLAKK 445
           ++                   L+ G                 C P + TYN LID   K 
Sbjct: 415 RVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIEKGCVPNIGTYNLLIDAFRKA 474

Query: 446 GCMEKAMVLYGQMMENGI 463
              E A  L   M++ G 
Sbjct: 475 NRDEDARELLDDMVQRGF 492



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 95/282 (33%), Positives = 153/282 (54%), Gaps = 2/282 (0%)

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           +A   CS D VTY SL+   CK  + + A++ +  ++S+G  P+  TY  ++H+L     
Sbjct: 2   VATNSCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENR 61

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                K L+ M   + +P V TY +LI+GLCK G VD A+   ++M  K C P  VTYN+
Sbjct: 62  LHEARKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKM-RKKCVPTAVTYNS 120

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LCK    +EA  LL  +  S C P + TY TLI G  K    + A+ ++ Q++  G
Sbjct: 121 LISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARG 180

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMA 521
             PD +T+  LI G C+  +++EA+DL   + K G+ M N+  Y  +I G C+  K+D A
Sbjct: 181 FRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEA 240

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + +LE M  +   PD   ++T++         ++AY L  ++
Sbjct: 241 MNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQM 282



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 75/209 (35%), Positives = 122/209 (58%), Gaps = 1/209 (0%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           S S    TY  LI GLCK   +++A+    +MVSK   PD+ TY  V+ ALC E  L+EA
Sbjct: 6   SCSADFVTYTSLIQGLCKVKRLEQALIFLGKMVSKGFHPDVYTYTAVIHALCVENRLHEA 65

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            + L  +   + +P ++TY  LIDGL K G +++A+ L  +M +  + P  +T+ +LI G
Sbjct: 66  RKFLEEMANRNLTPNVVTYTVLIDGLCKGGRVDEAVALLSKMRKKCV-PTAVTYNSLISG 124

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C+A++  EA DLL+E+   G       Y  +I G CKSKK D A++V E +++  ++PD
Sbjct: 125 LCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPD 184

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +S ++  +  +G  +EA  L+ ++I+
Sbjct: 185 VVTYSCLIDGLCKEGRLKEAIDLFGRMIK 213



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 109/209 (52%), Gaps = 7/209 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C   +L+DA  ++  M R++  P  +    ++ G  R +++E+A K +
Sbjct: 290 DVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRANQLEEARKFM 349

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +      P+ +++N+M+ GLCK  +   A+ L++E     C PDV+ Y T++  +   
Sbjct: 350 --LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDGLCRE 407

Query: 236 GKFKQAIGFWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            K  +A   ++  L + GC P  ITY+ LI  +C    + RA   ++    +GC P+I T
Sbjct: 408 KKVDEACRVYRKMLEEPGCLPNSITYSTLITGLCNAGMLDRARGYIE----KGCVPNIGT 463

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           YN L++   K  + +DA  ++++++ RG 
Sbjct: 464 YNLLIDAFRKANRDEDARELLDDMVQRGF 492


>gi|255544732|ref|XP_002513427.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223547335|gb|EEF48830.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 567

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 137/477 (28%), Positives = 248/477 (51%), Gaps = 36/477 (7%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           +++DA   ++ + +    PD      L+  L + ++++KA +V+++M+  G +PD  +Y 
Sbjct: 77  RISDAFFHLEHIVKNGHKPDVVQATQLLYDLCKSNKMKKAIRVMEMMISCGIIPDAASYT 136

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            +V  LCKRG +  A+ L+++M  SG   + +TYNT+++ +  +G   +++ F    ++K
Sbjct: 137 FLVNHLCKRGNVGYAMQLVEKMEDSGYPANTVTYNTLVKGLCMHGNLNKSLQFLDRLMQK 196

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P   TY+ L+E   K+ G+  A+ +LD++  +G  P++V+YN L+   CK+G+ ++A
Sbjct: 197 GLVPNAFTYSSLLEAAYKERGVNEAMRLLDEIIAKGGQPNLVSYNVLLTGLCKEGRIEEA 256

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + +  NL S+G  PN ++YN LL SL   G W+  +++L  MN    SP++ TYNILI  
Sbjct: 257 IRLFKNLPSKGFSPNVVSYNILLRSLCYEGRWEEANELLAEMNGRERSPSIVTYNILIGS 316

Query: 372 -----------------------------------LCKYGLVDRAINSFNQMVSKNCQPD 396
                                              LCK G V+  +N  +QM+   C P+
Sbjct: 317 LAFHGKIEQALQVIDEMMMGPFKPTATSYNPIIARLCKEGKVEAVVNCLDQMIFGRCSPN 376

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             T+N +   LC EG + EA  L+  L     S     Y  ++  L KKG    A +L  
Sbjct: 377 EGTFNAI-AVLCYEGKVQEAFSLIQSLGNKQNSSIHDYYKGVVSCLCKKGNTYPAFLLLY 435

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M + G +PD  T+ +LI G C    + EA+++ K + +   +     +  +I G CKS 
Sbjct: 436 EMTKYGFTPDSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSH 495

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
           + D++++V E+MI   Y P +T ++ +V+ +  +   E A ++ ++L   +V  + T
Sbjct: 496 RTDLSLEVFEMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRELHLRQVMSQST 552



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 101/392 (25%), Positives = 200/392 (51%), Gaps = 1/392 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C  G L  + + +D + ++  +P+     +L+    +   + +A ++L  +
Sbjct: 169 TYNTLVKGLCMHGNLNKSLQFLDRLMQKGLVPNAFTYSSLLEAAYKERGVNEAMRLLDEI 228

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  GG P+ ++YN+++ GLCK G+I  AI L   +   G  P+V++YN +LR++   G++
Sbjct: 229 IAKGGQPNLVSYNVLLTGLCKEGRIEEAIRLFKNLPSKGFSPNVVSYNILLRSLCYEGRW 288

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     +   +   P ++TY ILI  +     I +A++V+D+M +    P   +YN +
Sbjct: 289 EEANELLAEMNGRERSPSIVTYNILIGSLAFHGKIEQALQVIDEMMMGPFKPTATSYNPI 348

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK+GK +  V  ++ ++     PN  T+N +          +A   I  + N+ + 
Sbjct: 349 IARLCKEGKVEAVVNCLDQMIFGRCSPNEGTFNAIAVLCYEGKVQEAFSLIQSLGNKQNS 408

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S   + Y  +++ LCK G    A     +M      PD  TY++++  LC EGML EA++
Sbjct: 409 SIHDY-YKGVVSCLCKKGNTYPAFLLLYEMTKYGFTPDSYTYSSLIRGLCIEGMLYEAME 467

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +  LL      P +  +N LI G  K    + ++ ++  M+E G +P + T+  L+ G  
Sbjct: 468 IFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVFEMMIEKGYTPSETTYTILVEGII 527

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
             ++ E A ++L+E+  R    +++  RL++ 
Sbjct: 528 HEEEKELAAEVLRELHLRQVMSQSTVERLIMQ 559



 Score = 43.1 bits (100), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 28/117 (23%), Positives = 53/117 (45%), Gaps = 6/117 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + +++  C  G L +A ++  ++   +  PD      LI G  +  R + + +V 
Sbjct: 445 DSYTYSSLIRGLCIEGMLYEAMEIFKLLEEDHYRPDIDNFNALILGFCKSHRTDLSLEVF 504

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE------MSVSGCEPDVITYN 226
           ++M+  G  P   TY ++V G+    +   A  +L E      MS S  E  ++ Y+
Sbjct: 505 EMMIEKGYTPSETTYTILVEGIIHEEEKELAAEVLRELHLRQVMSQSTVERLIMQYD 561


>gi|302781562|ref|XP_002972555.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
 gi|300160022|gb|EFJ26641.1| hypothetical protein SELMODRAFT_97527 [Selaginella moellendorffii]
          Length = 564

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 147/466 (31%), Positives = 240/466 (51%), Gaps = 11/466 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C    L    +L + +  R   PD      LI  L +   +E+A ++   M
Sbjct: 39  TYNTIINGLCKSNDLGAGMELFEELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDM 98

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE--PDVITYNTILRTMFDNG 236
              G VP+ +TY++++ GLCK G+I  A  L+ EM+   C+  P++ITYN+ L  +    
Sbjct: 99  SSRGCVPNVVTYSVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQS 158

Query: 237 KFKQAIGFWKDQLRKG---CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              +A    +  LR G     P  +T++ LI+ +CK   I  A  V DDM   G  P+++
Sbjct: 159 MTAEACELMR-SLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVI 217

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+LVN  CK  K + A  +I +++ +G+ P+ ITY+ L+ +       D   ++L  M
Sbjct: 218 TYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGM 277

Query: 354 NEASHSPTVF-----TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
                +P V      T+NILI G CK G  ++A   F +MV+KN QPD++T+  ++  LC
Sbjct: 278 ASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLC 337

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G +  A  +L L+      P ++TYN L+ GL K G +E+A     +M+ +G  PD I
Sbjct: 338 KAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSI 397

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +L++  CRA + ++A+ L+ E+   G       Y +++ GL KS K + AI VLE M
Sbjct: 398 TYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEM 457

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +   ++PD   F+     +   G      +L + ++   +    TT
Sbjct: 458 VGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDATT 503



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 243/458 (53%), Gaps = 18/458 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDI----MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           N +LQ+ C  G   D ++ ++I    MAR    P       +I GL + + +    ++ +
Sbjct: 5   NIVLQSLCRAG---DTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFE 61

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            +V  G  PD +TYN ++  LCK G +  A  L  +MS  GC P+V+TY+ ++  +   G
Sbjct: 62  ELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVG 121

Query: 237 KFKQAIGFWKDQLRKGCP--PYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPD 291
           +  +A    ++  RK C   P +ITY   ++ +CKQ   A A E+   L D ++   SPD
Sbjct: 122 RIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR-VSPD 180

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            VT+++L++  CK G+ D+A  V +++++ G  PN ITYN L++ L      +    +++
Sbjct: 181 TVTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIE 240

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI-----VTYNTVLGA 406
            M +   +P V TY++L++  CK   VD A+   + M S+ C P++     VT+N ++  
Sbjct: 241 SMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAG 300

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK G   +A  L   +   +  P ++T+  LIDGL K G +E A  +   M   G+ P+
Sbjct: 301 ACKAGNFEQASALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPN 360

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+  L+ G C++ ++EEA   L+E+   G    +  Y  +++ LC++ + D A+Q++ 
Sbjct: 361 VVTYNALVHGLCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVS 420

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            + S  + PD   ++ +V  +   G TE+A  + ++++
Sbjct: 421 ELKSFGWDPDTVTYNILVDGLWKSGKTEQAITVLEEMV 458



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 228/448 (50%), Gaps = 44/448 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + C  G L +A +L   M+ R  +P+      LI GL ++ RI++A +++
Sbjct: 71  DVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRIDEARELI 130

Query: 176 QIM------------------------------------VMSGGV---PDTITYNMMVGG 196
           Q M                                    +  G +   PDT+T++ ++ G
Sbjct: 131 QEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDG 190

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           LCK GQI  A ++ D+M   G  P+VITYN ++  +    K ++A    +  + KG  P 
Sbjct: 191 LCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPD 250

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI-----VTYNSLVNFSCKQGKYDDA 311
           +ITY++L++  CK   +  A+E+L  MA  GC+P++     VT+N L+  +CK G ++ A
Sbjct: 251 VITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQA 310

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             +   ++++ ++P+ +T+  L+  L   G  +A   ILD+M      P V TYN L++G
Sbjct: 311 SALFEEMVAKNLQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHG 370

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           LCK G ++ A     +MVS  C PD +TY +++ ALC+    ++ALQL+  L      P 
Sbjct: 371 LCKSGRIEEACQFLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPD 430

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
            +TYN L+DGL K G  E+A+ +  +M+  G  PD  T      G  R+  +   ++LL+
Sbjct: 431 TVTYNILVDGLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLR 490

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
            +  +G     +    ++  +C+S K+D
Sbjct: 491 VVLAKGMLPDATTCSSILDWVCRSGKLD 518



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/315 (33%), Positives = 177/315 (56%), Gaps = 10/315 (3%)

Query: 260 YTILIEQVCKQCGIARAIEVL-DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           Y I+++ +C+    ARA+E+   +MA +G +P IVTYN+++N  CK       + +   L
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           + RG  P+ +TYNTL+ SL   G  +   ++   M+     P V TY++LINGLCK G +
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 379 DRAINSFNQMVSKNCQ--PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS--CSPCLIT 434
           D A     +M  K+C   P+I+TYN+ L  LCK+ M  EA +L+  L   S   SP  +T
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVT 183

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           ++TLIDGL K G +++A  ++  M+  G  P+ IT+  L+ G C+AD++E A  +++ + 
Sbjct: 184 FSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMV 243

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS-----SRYKPDDTVFSTIVKKVAD 549
            +G       Y +++   CK+ +VD A+++L  M S     +   PD   F+ ++     
Sbjct: 244 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACK 303

Query: 550 DGMTEEAYKLWQKLI 564
            G  E+A  L+++++
Sbjct: 304 AGNFEQASALFEEMV 318



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 200/382 (52%), Gaps = 11/382 (2%)

Query: 83  HVLAVNKKLRGL---TITKKSHDPSLPSSDGPF-VENDEKTNNKILQNFCSRGKLTDASK 138
           +++  N  L GL   ++T ++ +      DG   V  D  T + ++   C  G++ +A  
Sbjct: 143 NIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTVTFSTLIDGLCKCGQIDEACS 202

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           + D M     +P+      L+ GL + D++E+A  +++ MV  G  PD ITY+++V   C
Sbjct: 203 VFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIESMVDKGVTPDVITYSVLVDAFC 262

Query: 199 KRGQIRSAIALLDEMSVSGCEPDV-----ITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
           K  ++  A+ LL  M+  GC P+V     +T+N ++      G F+QA   +++ + K  
Sbjct: 263 KASRVDEALELLHGMASRGCTPNVLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNL 322

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
            P ++T+  LI+ +CK   +  A ++LD M   G  P++VTYN+LV+  CK G+ ++A  
Sbjct: 323 QPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNALVHGLCKSGRIEEACQ 382

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
            +  ++S G  P+SITY +L+++L      D   +++  +      P   TYNIL++GL 
Sbjct: 383 FLEEMVSSGCVPDSITYGSLVYALCRASRTDDALQLVSELKSFGWDPDTVTYNILVDGLW 442

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K G  ++AI    +MV K  QPD  T+      L + G L   ++LL ++      P   
Sbjct: 443 KSGKTEQAITVLEEMVGKGHQPDSFTFAACFSGLHRSGNLAGTMELLRVVLAKGMLPDAT 502

Query: 434 TYNTLIDGLAKKGCME--KAMV 453
           T ++++D + + G ++  KAM+
Sbjct: 503 TCSSILDWVCRSGKLDDVKAMI 524



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 76/246 (30%), Positives = 130/246 (52%), Gaps = 9/246 (3%)

Query: 330 YNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           YN +L SL   G    A++     M     +PT+ TYN +INGLCK   +   +  F ++
Sbjct: 4   YNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELFEEL 63

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           V +   PD+VTYNT++ +LCK G L EA +L   ++   C P ++TY+ LI+GL K G +
Sbjct: 64  VERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKVGRI 123

Query: 449 EKAMVLYGQMMENG--ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--- 503
           ++A  L  +M      + P+ IT+ + + G C+     EA +L++ +  R   +R S   
Sbjct: 124 DEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL--RDGSLRVSPDT 181

Query: 504 -AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             +  +I GLCK  ++D A  V + MI+  Y P+   ++ +V  +      E A+ + + 
Sbjct: 182 VTFSTLIDGLCKCGQIDEACSVFDDMIAGGYVPNVITYNALVNGLCKADKMERAHAMIES 241

Query: 563 LIEWKV 568
           +++  V
Sbjct: 242 MVDKGV 247



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 109/211 (51%), Gaps = 11/211 (5%)

Query: 362 VFTYNILINGLCKYGLVDRAINSF-NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           V  YNI++  LC+ G   RA+  F  +M      P IVTYNT++  LCK   L   ++L 
Sbjct: 1   VADYNIVLQSLCRAGDTARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNDLGAGMELF 60

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             L      P ++TYNTLID L K G +E+A  L+G M   G  P+ +T+  LI G C+ 
Sbjct: 61  EELVERGHHPDVVTYNTLIDSLCKAGDLEEARRLHGDMSSRGCVPNVVTYSVLINGLCKV 120

Query: 481 DQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMI-----SSRY 533
            +++EA +L++E+ ++   +  +   Y   + GLCK     M  +  ELM      S R 
Sbjct: 121 GRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQS---MTAEACELMRSLRDGSLRV 177

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            PD   FST++  +   G  +EA  ++  +I
Sbjct: 178 SPDTVTFSTLIDGLCKCGQIDEACSVFDDMI 208


>gi|147819144|emb|CAN78081.1| hypothetical protein VITISV_021300 [Vitis vinifera]
          Length = 778

 Score =  248 bits (633), Expect = 6e-63,   Method: Compositional matrix adjust.
 Identities = 141/450 (31%), Positives = 230/450 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N IL   C +G+L DA  L+  M  R  +P+ +    L+ G  ++  +++A+ V+
Sbjct: 242 DNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVI 301

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M  +  +PD  TYNM++ GLC  G+I  A  L DEM      PDV++YNT++    + 
Sbjct: 302 ELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEW 361

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  +A    ++   KG  P  +T+ I+++  CK+  +  A   +  M   G SPD VTY
Sbjct: 362 SKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTY 421

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  CK G   +A   ++ +  + M+ +S+T NT+L +L      +   K+L    +
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             +     +Y  LI G  K G VDRA+  +++M  K   P  VTYN ++G LC+ G   +
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+  L+ L  S   P   TYNT++ G  ++G +EKA   + +M+EN   PD  T   L+ 
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLR 601

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C    +E+A+ L      +G  +    Y  +I  LCK  ++D A  +L  M      P
Sbjct: 602 GLCMEGMLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGP 661

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   ++ I+  + D G   EA +   K++E
Sbjct: 662 DHYTYNAIITALTDSGRIREAEEFMSKMLE 691



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 217/422 (51%), Gaps = 9/422 (2%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +L+ G I  DR       L + ++    P     +  +G   + GQ   A  +  +M   
Sbjct: 109 SLLLGFIATDRRHD----LHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRL 164

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGF----WKDQLRKGCPPYLITYTILIEQVCKQCG 272
              P+++T NT+L ++        ++ F    + D ++ G  P + T+ I+I   C +  
Sbjct: 165 RLRPNLLTCNTLLNSLVRYPS-SHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENK 223

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
              A+E L+ M    CSPD VTYN++++  CK+G+  DA  ++ ++ SRG+ PN  TYN 
Sbjct: 224 FKDAVEFLNVMGKYNCSPDNVTYNTILDALCKKGRLGDARDLLMDMKSRGLLPNRNTYNI 283

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L++     G       ++++M + +  P V+TYN+LINGLC  G ++ A    ++M +  
Sbjct: 284 LVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK 343

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             PD+V+YNT++    +   ++EA +LL  ++     P  +T+N ++    K+G M+ A 
Sbjct: 344 LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDAS 403

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
               +M E+G SPD +T+ TLI G+C+A  + EA   + E+G++  KM +     ++  L
Sbjct: 404 NTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
           C+ KK++ A ++L       Y  D+  + T++     DG  + A KLW ++ E ++    
Sbjct: 464 CREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPST 523

Query: 573 TT 574
            T
Sbjct: 524 VT 525



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 185/454 (40%), Gaps = 93/454 (20%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ-- 176
           T N ++   C+ G++ +A KL D M     +PD      LI G +   +I +A K+L+  
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 177 -------------IMVM--------------------SGGVPDTITYNMMVGGLCKRGQI 203
                        IMV                     SG  PD +TYN ++ G CK G +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A   +DEM     + D +T NTILRT+    K ++A        ++G     ++Y  L
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I    K   + RA+++ D+M  +   P  VTYN ++   C+ GK + A+  +N LL  G+
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT------------------- 364
            P+  TYNT+LH     G  +   +  + M E S  P VFT                   
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALK 614

Query: 365 ----------------YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
                           YN LI  LCK G +D A N  ++M  K   PD  TYN ++ AL 
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 409 KEGMLNEALQLLHLLNGSSCSP-----------------------CLITYNTLIDGLAKK 445
             G + EA + +  +      P                         + Y+  I  L  +
Sbjct: 675 DSGRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSSSVAYSEWIKELCTE 734

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           G  + AM ++G+  + GI+ D  T+  L+ G  +
Sbjct: 735 GKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 67/225 (29%), Positives = 97/225 (43%), Gaps = 12/225 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T N IL  +C  G +  A +  + M   +  PD   C  L+RGL     +EKA K+ 
Sbjct: 557 DETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGMLEKALKLF 616

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              V  G   DT+TYN ++  LCK G++  A  LL EM      PD  TYN I+  + D+
Sbjct: 617 NTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALTDS 676

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ ++A  F    L KG  P  +      E V        +                V Y
Sbjct: 677 GRIREAEEFMSKMLEKGXLPXQVLQLDXNETVVTSETSEESDSS------------SVAY 724

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           +  +   C +GKY DA+ +      +G+  +  TY  L+  L  R
Sbjct: 725 SEWIKELCTEGKYKDAMRIFGESKQKGITVDKSTYINLMDGLIKR 769


>gi|359486541|ref|XP_002275423.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Vitis vinifera]
          Length = 778

 Score =  248 bits (632), Expect = 7e-63,   Method: Compositional matrix adjust.
 Identities = 141/450 (31%), Positives = 230/450 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N IL   C +G+L DA  L+  M  R  +P+ +    L+ G  ++  +++A+ V+
Sbjct: 242 DNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNILVYGYCKMGWLKEAANVI 301

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M  +  +PD  TYNM++ GLC  G+I  A  L DEM      PDV++YNT++    + 
Sbjct: 302 ELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEW 361

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  +A    ++   KG  P  +T+ I+++  CK+  +  A   +  M   G SPD VTY
Sbjct: 362 SKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTY 421

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  CK G   +A   ++ +  + M+ +S+T NT+L +L      +   K+L    +
Sbjct: 422 NTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARK 481

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             +     +Y  LI G  K G VDRA+  +++M  K   P  VTYN ++G LC+ G   +
Sbjct: 482 RGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQ 541

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+  L+ L  S   P   TYNT++ G  ++G +EKA   + +M+EN   PD  T   L+ 
Sbjct: 542 AISKLNELLESGLLPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLR 601

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C    +E+A+ L      +G  +    Y  +I  LCK  ++D A  +L  M      P
Sbjct: 602 GLCMEGVLEKALKLFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGP 661

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   ++ I+  + D G   EA +   K++E
Sbjct: 662 DHYTYNAIITALTDSGRIREAEEFMSKMLE 691



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 217/422 (51%), Gaps = 9/422 (2%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +L+ G I  DR       L + ++    P     +  +G   + GQ   A  +  +M   
Sbjct: 109 SLLLGFIATDRRHD----LHLSILRLTSPSKALLDTAIGAYVQSGQPHHAFQIFKKMKRL 164

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGF----WKDQLRKGCPPYLITYTILIEQVCKQCG 272
              P+++T NT+L ++        ++ F    + D ++ G  P + T+ I+I   C +  
Sbjct: 165 RLRPNLLTCNTLLNSLVRYPS-SHSVSFSREAFNDAIKLGIVPNVNTFNIVIYGYCLENK 223

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
              A+E L+ M    CSPD VTYN++++  CK+G+  DA  ++ ++ SRG+ PN  TYN 
Sbjct: 224 FKDAVEFLNVMGKYNCSPDNVTYNTILDTLCKKGRLGDARDLLMDMKSRGLLPNRNTYNI 283

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L++     G       ++++M + +  P V+TYN+LINGLC  G ++ A    ++M +  
Sbjct: 284 LVYGYCKMGWLKEAANVIELMTQNNLLPDVWTYNMLINGLCNEGRIEEAFKLRDEMENLK 343

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             PD+V+YNT++    +   ++EA +LL  ++     P  +T+N ++    K+G M+ A 
Sbjct: 344 LLPDVVSYNTLINGCLEWSKISEAFKLLEEMSEKGVKPNAVTHNIMVKWYCKEGKMDDAS 403

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
               +M E+G SPD +T+ TLI G+C+A  + EA   + E+G++  KM +     ++  L
Sbjct: 404 NTITKMEESGFSPDCVTYNTLINGYCKAGNMGEAFRTMDEMGRKNMKMDSVTLNTILRTL 463

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
           C+ KK++ A ++L       Y  D+  + T++     DG  + A KLW ++ E ++    
Sbjct: 464 CREKKLEEAYKLLSSARKRGYFIDEVSYGTLIVGYFKDGNVDRALKLWDEMKEKEIIPST 523

Query: 573 TT 574
            T
Sbjct: 524 VT 525



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 185/454 (40%), Gaps = 93/454 (20%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ-- 176
           T N ++   C+ G++ +A KL D M     +PD      LI G +   +I +A K+L+  
Sbjct: 315 TYNMLINGLCNEGRIEEAFKLRDEMENLKLLPDVVSYNTLINGCLEWSKISEAFKLLEEM 374

Query: 177 -------------IMVM--------------------SGGVPDTITYNMMVGGLCKRGQI 203
                        IMV                     SG  PD +TYN ++ G CK G +
Sbjct: 375 SEKGVKPNAVTHNIMVKWYCKEGKMDDASNTITKMEESGFSPDCVTYNTLINGYCKAGNM 434

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A   +DEM     + D +T NTILRT+    K ++A        ++G     ++Y  L
Sbjct: 435 GEAFRTMDEMGRKNMKMDSVTLNTILRTLCREKKLEEAYKLLSSARKRGYFIDEVSYGTL 494

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I    K   + RA+++ D+M  +   P  VTYN ++   C+ GK + A+  +N LL  G+
Sbjct: 495 IVGYFKDGNVDRALKLWDEMKEKEIIPSTVTYNCIIGGLCQCGKTEQAISKLNELLESGL 554

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT------------------- 364
            P+  TYNT+LH     G  +   +  + M E S  P VFT                   
Sbjct: 555 LPDETTYNTILHGYCREGDVEKAFQFHNKMVENSFKPDVFTCNILLRGLCMEGVLEKALK 614

Query: 365 ----------------YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
                           YN LI  LCK G +D A N  ++M  K   PD  TYN ++ AL 
Sbjct: 615 LFNTWVSKGKAIDTVTYNTLITSLCKEGRLDDAFNLLSEMEEKELGPDHYTYNAIITALT 674

Query: 409 KEGMLNEALQLLHLLNGSSCSP-----------------------CLITYNTLIDGLAKK 445
             G + EA + +  +      P                         + Y+  I  L  +
Sbjct: 675 DSGRIREAEEFMSKMLEKGNLPDQVLQLDKNETVVTSETSEESDSSSVAYSEWIKELCTE 734

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           G  + AM ++G+  + GI+ D  T+  L+ G  +
Sbjct: 735 GKYKDAMRIFGESKQKGITVDKSTYINLMDGLIK 768


>gi|354726093|emb|CCD31439.1| RNA processing factor 3 [Arabidopsis thaliana]
          Length = 629

 Score =  247 bits (631), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 133/453 (29%), Positives = 242/453 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  + N ++  FC R +L  A  ++  M +    PD     +L+ G     RI  A 
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 170

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PDT+T+N ++ GL    +   A+AL+D+M   GC+PD++TY  ++  +
Sbjct: 171 ALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGL 230

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+   K   +      ++ Y  +I+ +CK   I  A  + + M  +G  PD+
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDV 290

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYNSL++  C  G++ DA  +++N++ R + PN +T++ L+ +    G     +K+ D 
Sbjct: 291 FTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M + S  P +FTY+ LING C +  +D A + F  M+SK+C P++VTYNT++   CK   
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + E ++L   ++        +TYNTLI GL + G  + A  ++ +M+ +G+ PD IT+  
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++E+A+ + + + K   +     Y ++I G+CK+ KV+    +   +    
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KP+  +++T++      G+ EEA  L++++ E
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 224/450 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + +L  +C   +++DA  L+D M      PD      LI GL   ++  +A  
Sbjct: 147 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGLFLHNKASEAVA 206

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  PD +TY  +V GLCKRG I  A++LL +M     E DV+ YNTI+  + 
Sbjct: 207 LVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 266

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
                  A   +     KG  P + TY  LI  +C     + A  +L +M     +P++V
Sbjct: 267 KYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSNMIERKINPNVV 326

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+++L++   K+GK  +A  + + ++ R ++P+  TY++L++        D    + ++M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P V TYN LI G CK   V+  +  F +M  +    + VTYNT++  L + G  
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A ++   +      P +ITY+ L+DGL K G +EKA+V++  + ++ + PD  T+  +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+A +VE+  DL   +  +G K     Y  +I G C+    + A  +   M     
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            PD   ++T+++    DG    + +L +++
Sbjct: 567 LPDSGCYNTLIRARLRDGDKAASAELIKEM 596



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 240/481 (49%), Gaps = 22/481 (4%)

Query: 91  LRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           LRG+  +  S+D              EK +   L N     KL DA  L   M +   +P
Sbjct: 35  LRGVYFSAASYDYR------------EKLSRNALLNL----KLDDAIGLFGEMVQSRPLP 78

Query: 151 ---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI 207
              +F+  ++ I  + + D +    + +Q + +S    D  +YN+++   C+R Q+  A+
Sbjct: 79  SIVEFNKLLSAIAKMKKFDLVISLGERMQNLRIS---YDLYSYNILINCFCRRSQLPLAL 135

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
           A+L +M   G EPD++T +++L     + +   A+      +  G  P  +T+  LI  +
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTVTFNTLIHGL 195

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                 + A+ ++D M   GC PD+VTY ++VN  CK+G  D A+ ++  +    +E + 
Sbjct: 196 FLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           + YNT++  L      D    + + M      P VFTYN LI+ LC YG    A    + 
Sbjct: 256 VIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLSN 315

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M+ +   P++VT++ ++ A  KEG L EA +L   +   S  P + TY++LI+G      
Sbjct: 316 MIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDR 375

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +++A  ++  M+     P+ +T+ TLI GFC+A +VEE ++L +E+ +RG       Y  
Sbjct: 376 LDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNT 435

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +I GL ++   DMA ++ + M+S    PD   +S ++  +   G  E+A  +++ L + K
Sbjct: 436 LIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSK 495

Query: 568 V 568
           +
Sbjct: 496 M 496



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 171/362 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    N I+   C    + DA  L + M  +   PD     +LI  L    R   AS
Sbjct: 251 IEADVVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDAS 310

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+     P+ +T++ ++    K G++  A  L DEM     +PD+ TY++++   
Sbjct: 311 RLLSNMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   ++  + K C P ++TY  LI+  CK   +   +E+  +M+  G   + 
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L+    + G  D A  +   ++S G+ P+ ITY+ LL  L   G  +    + + 
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + ++   P ++TYNI+I G+CK G V+   + F  +  K  +P+++ Y T++   C++G+
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             EA  L   +      P    YNTLI    + G    +  L  +M   G   D  T   
Sbjct: 551 KEEADALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 610

Query: 473 LI 474
           +I
Sbjct: 611 VI 612



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 187/407 (45%), Gaps = 44/407 (10%)

Query: 197 LCKR-GQIRSAIALLDEMSVSGCEPDVITYN---TILRTMFDNGKFKQAIGFWKDQLRKG 252
           L KR  Q+R A  L    S+ G      +Y+    + R    N K   AIG + + ++  
Sbjct: 19  LAKRFAQLRKASPLF---SLRGVYFSAASYDYREKLSRNALLNLKLDDAIGLFGEMVQSR 75

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P ++ +  L+  + K       I + + M     S D+ +YN L+N  C++ +   A+
Sbjct: 76  PLPSIVEFNKLLSAIAKMKKFDLVISLGERMQNLRISYDLYSYNILINCFCRRSQLPLAL 135

Query: 313 LVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
            V+  ++  G EP+ +T ++LL+    S+   DAV  ++D M E  + P   T+N LI+G
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV-ALVDQMVEMGYKPDTVTFNTLIHG 194

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           L  +     A+   +QMV + CQPD+VTY  V+  LCK G ++ AL LL  +        
Sbjct: 195 LFLHNKASEAVALVDQMVQRGCQPDLVTYGAVVNGLCKRGDIDLALSLLKKMEKGKIEAD 254

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI--------W-------- 475
           ++ YNT+IDGL K   ++ A  L+ +M   GI PD  T+ +LI        W        
Sbjct: 255 VVIYNTIIDGLCKYKHIDDAFALFNKMETKGIRPDVFTYNSLISCLCNYGRWSDASRLLS 314

Query: 476 -------------------GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
                               F +  ++ EA  L  E+ KR        Y  +I+G C   
Sbjct: 315 NMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHD 374

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++D A  + ELMIS    P+   ++T++K        EE  +L++++
Sbjct: 375 RLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREM 421



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 30/129 (23%), Positives = 59/129 (45%), Gaps = 1/129 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T N +++  C  GK+ D   L   ++ +   P+      +I G  R    E+A 
Sbjct: 496 MEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEAD 555

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M   G +PD+  YN ++    + G   ++  L+ EM   G   D  T + ++  M
Sbjct: 556 ALFREMKEDGTLPDSGCYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISMVI-NM 614

Query: 233 FDNGKFKQA 241
             +G+ +++
Sbjct: 615 LHDGRLEKS 623


>gi|302803484|ref|XP_002983495.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
 gi|300148738|gb|EFJ15396.1| hypothetical protein SELMODRAFT_118272 [Selaginella moellendorffii]
          Length = 561

 Score =  247 bits (630), Expect = 1e-62,   Method: Compositional matrix adjust.
 Identities = 136/466 (29%), Positives = 241/466 (51%), Gaps = 8/466 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T   ++   C  GKL  A +L+D M  R   P       +IRGL +  R   A    
Sbjct: 29  NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIRGLCKAGRFGDALGYF 88

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFD 234
           + +  +   PD IT+N++V  L K G++  A  + + M  S  C P+V+TY T++  +  
Sbjct: 89  KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +GK  +AI         GC P +ITY++L+E +CK     +   +L +M   G  PD++ 
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N  CK  + D+A+ ++  ++  G  P  +TYN+L+         D   +++ +M+
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM-- 412
           E    P V  YN +I GLC+   +D A     QMV+  C PD++TY+T++  LCK+    
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 413 ----LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
               L  A ++L ++  + C P   TY  +I+GL +    ++A+ L  +M+++ + PD  
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           +   +I   C++  ++ A  +   + +R  K    AY  +I GL K  +VD A++V ELM
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           + S ++P    +++++  +   G  EEA ++ + +I  + F  G +
Sbjct: 449 VES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS 493



 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 129/406 (31%), Positives = 214/406 (52%), Gaps = 7/406 (1%)

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           R  +  + +Q+      VP+  TY  ++ GLCK G++  A  LLDEM   G  P V  +N
Sbjct: 10  RAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHN 69

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++R +   G+F  A+G++K      C P +IT+ IL++ + K   +  A ++ + M   
Sbjct: 70  GVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTS 129

Query: 287 G-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
             C P++VTY +++N  CK GK D A+ +++ +   G  PN ITY+ L+  L   G  D 
Sbjct: 130 SQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDK 189

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              +L  M      P V  YN L+NGLCK   +D A+     M+   C P +VTYN+++ 
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             C+   ++ A +L+ +++   C P +I YNT+I GL +   ++ A  L  QM+     P
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309

Query: 466 DDITHRTLIWGFCR-----AD-QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           D IT+ T+I G C+     AD ++E A ++L+ + + G       Y +VI GLC+++K  
Sbjct: 310 DVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQ 369

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            A+ +L  MI S   PD + FS ++  +      + AYK++  + E
Sbjct: 370 QALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415



 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 133/496 (26%), Positives = 262/496 (52%), Gaps = 14/496 (2%)

Query: 88  NKKLRGLTITKKSHDP--SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMAR 145
           N  +RGL    +  D      +  G     D  T N ++      G++ +A ++ + M  
Sbjct: 69  NGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHT 128

Query: 146 RNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
            +Q +P+      +I GL +  ++++A ++L +M  +G  P+ ITY+++V GLCK G+  
Sbjct: 129 SSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTD 188

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
               LL EM+  G +PDVI YNT+L  +  + +  +A+   +  +R GC P ++TY  L+
Sbjct: 189 KGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLM 248

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           E  C+   + RA  ++  M+  GC PD++ YN+++   C+  + DDA  ++  +++    
Sbjct: 249 ELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCV 308

Query: 325 PNSITYNTLLHSLGSRGCW--------DAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
           P+ ITY+T++  L     W        +A  +IL++M +    P   TY ++I GLC+  
Sbjct: 309 PDVITYSTIIDGLCKD--WRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRAR 366

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
              +A+    +M+     PD+ +++ V+G+LCK   L+ A ++  +++   C P  + Y 
Sbjct: 367 KSQQALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYA 426

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            LIDGL+K G ++KA+ ++  M+E+   P   T+ +++ G C   ++EEAV +++ +  +
Sbjct: 427 ALIDGLSKGGEVDKAVRVFELMVES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHK 485

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                 ++Y  +I GLC+   V+ A ++ + + +  +  +  V++ +V ++       +A
Sbjct: 486 ECFPDGASYGALIRGLCRVSCVEEAYELFQAVEAKGFAMEVGVYNVLVNELCKKKRLSDA 545

Query: 557 YKLWQKLIEWKVFEKG 572
           + +  KLIE    ++G
Sbjct: 546 HGVANKLIEAGYKQQG 561



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 199/379 (52%), Gaps = 10/379 (2%)

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           L + GQ   A+ L  E     C P+  TY +++  +   GK  QA     +   +G PP 
Sbjct: 8   LVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPG 64

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           +  +  +I  +CK      A+     +A   C+PDI+T+N LV+   K G+ ++A  +  
Sbjct: 65  VAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFE 124

Query: 317 NL-LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           ++  S    PN +TY T+++ L   G  D   ++LD+MNE    P V TY++L+ GLCK 
Sbjct: 125 SMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G  D+      +M  +  QPD++ YNT+L  LCK   L+EAL+L+ L+  S C P ++TY
Sbjct: 185 GRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTY 244

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           N+L++   +   +++A  L   M E G  PD I + T+I G CR  ++++A  LLK++  
Sbjct: 245 NSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVA 304

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVD------MAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
                    Y  +I GLCK  +VD       A ++LE+M  +   P+   ++ +++ +  
Sbjct: 305 ARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCR 364

Query: 550 DGMTEEAYKLWQKLIEWKV 568
              +++A  L +++I+ +V
Sbjct: 365 ARKSQQALALLRRMIDSEV 383



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 184/344 (53%), Gaps = 13/344 (3%)

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N  L  +   G+  QA+  ++++    C P   TY  LI  +CK   + +A E+LD+M  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
            G  P +  +N ++   CK G++ DA+     +      P+ IT+N L+ +L   G  + 
Sbjct: 59  RGIPPGVAVHNGVIRGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 346 VDKILDIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
             +I + M+ +S   P V TY  +INGLCK G +DRAI   + M    C P+++TY+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LCK G  ++   LL  +      P +I YNTL++GL K   +++A+ L   M+ +G  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P  +T+ +L+  FCR+ QV+ A  L++ + +RG       Y  VI GLC+  ++D A  +
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           L+ M+++R  PD   +STI+     DG+ ++    W+   +WK+
Sbjct: 299 LKQMVAARCVPDVITYSTII-----DGLCKD----WRVDADWKL 333


>gi|218198940|gb|EEC81367.1| hypothetical protein OsI_24568 [Oryza sativa Indica Group]
          Length = 1380

 Score =  247 bits (630), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 230/429 (53%), Gaps = 1/429 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  ++  C  G+L +A +L+D M R   +PD      LIRGL +    ++A   L+ M
Sbjct: 224 TYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 282

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G +PD  TYN ++ G CK   ++ A  LL +    G  PD +TY +++  +   G  
Sbjct: 283 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 342

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+  + +   KG  P ++ Y  L++ +C Q  I  A++V+++MA EGC PDI TYN +
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G   DA +V+N+ + +G  P+  T+NTL+     R   D+  ++++ M E   
Sbjct: 403 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   TYN ++NGLCK G V+    +F +M+ K C P+ +TYN ++   C+   + EA +
Sbjct: 463 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 522

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  ++     P  +++NTLI G  + G +E A +L+ ++ E G S    T  TLI  F 
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 582

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
               +  A  +  E+  +G++  +  YR++I G CK+  VD A   L  MI   + P  +
Sbjct: 583 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 642

Query: 539 VFSTIVKKV 547
            F  ++  +
Sbjct: 643 TFGRVINSL 651



 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 227/449 (50%), Gaps = 9/449 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINL-IRGLIRIDRIEKASKVLQIMV 179
           NK+L   C RG + +A  L+  + +R    +  F  N+ IRGL    R+ +A +++  M 
Sbjct: 191 NKVLHALCKRGDVLEAGLLLGKVIQRGMSINL-FTYNIWIRGLCEAGRLPEAVRLVDGM- 248

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            +  VPD +TYN ++ GLCK+   + A+  L  M   GC PD  TYNTI+         +
Sbjct: 249 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 308

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A    KD + KG  P  +TY  LI  +C +  + RA+E+ ++   +G  PDIV YNSLV
Sbjct: 309 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 368

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA--- 356
              C QG    A+ V+N +   G  P+  TYN +++ L   G    +     +MN+A   
Sbjct: 369 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG---NISDATVVMNDAIMK 425

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            + P VFT+N LI+G CK   +D A+    +M      PD +TYN+VL  LCK G +NE 
Sbjct: 426 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 485

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +    +    C P  ITYN LI+   +   ME+A  +  +M + G+ PD ++  TLI+G
Sbjct: 486 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 545

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           FCR   +E A  L +++ ++G       +  +I        + MA ++ + M+S  ++ D
Sbjct: 546 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 605

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +  ++         + AY    ++I+
Sbjct: 606 SYTYRVLIDGSCKTANVDRAYMHLVEMIK 634



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 237/456 (51%), Gaps = 11/456 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T+   L++FC   +   A +L+  +  R  +    +C  ++ GL        A 
Sbjct: 117 VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVA---YC-TVVCGLYAHGHTHDAR 172

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M+ +   P+   +N ++  LCKRG +  A  LL ++   G   ++ TYN  +R +
Sbjct: 173 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 232

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            + G+  +A+    D +R    P ++TY  LI  +CK+     A+  L  M  +GC PD 
Sbjct: 233 CEAGRLPEAVRL-VDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 291

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN++++  CK     +A  ++ + + +G  P+ +TY +L++ L + G    V++ L++
Sbjct: 292 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG---DVERALEL 348

Query: 353 MNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            NEA      P +  YN L+ GLC  GL+  A+   N+M  + C PDI TYN V+  LCK
Sbjct: 349 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 408

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G +++A  +++        P + T+NTLIDG  K+  ++ A+ L  +M E GI+PD IT
Sbjct: 409 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 468

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +++ G C+A +V E  +  +E+  +G       Y ++I   C+S K++ A +V+  M 
Sbjct: 469 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 528

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                PD   F+T++     +G  E AY L+QKL E
Sbjct: 529 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 564



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 230/436 (52%), Gaps = 1/436 (0%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           + G   DA +L D M   +  P+      ++  L +   + +A  +L  ++  G   +  
Sbjct: 164 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF 223

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TYN+ + GLC+ G++  A+ L+D M      PDV+TYNT++R +      ++A+ + +  
Sbjct: 224 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 282

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           + +GC P   TY  +I+  CK   +  A E+L D   +G  PD VTY SL+N  C +G  
Sbjct: 283 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 342

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           + A+ + N   ++G++P+ + YN+L+  L  +G      ++++ M E    P + TYNI+
Sbjct: 343 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 402

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           INGLCK G +  A    N  + K   PD+ T+NT++   CK   L+ ALQL+  +     
Sbjct: 403 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P  ITYN++++GL K G + +    + +M+  G  P+ IT+  LI  FCR++++EEA  
Sbjct: 463 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 522

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           ++ ++ + G      ++  +I+G C++  ++ A  + + +    Y      F+T++   +
Sbjct: 523 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 582

Query: 549 DDGMTEEAYKLWQKLI 564
                  A K++ +++
Sbjct: 583 GKLNMHMAEKIFDEML 598



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 222/435 (51%), Gaps = 2/435 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +++  C +    +A   +  M  +  +PD      +I G  +I  +++A+++L
Sbjct: 255 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 314

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  V  G VPD +TY  ++ GLC  G +  A+ L +E    G +PD++ YN++++ +   
Sbjct: 315 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 374

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A+    +   +GC P + TY I+I  +CK   I+ A  V++D  ++G  PD+ T+
Sbjct: 375 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 434

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK+ K D A+ ++  +   G+ P++ITYN++L+ L   G  + V++    M  
Sbjct: 435 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 494

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TYNILI   C+   ++ A     +M  +   PD V++NT++   C+ G L  
Sbjct: 495 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 554

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   L     S    T+NTLI   + K  M  A  ++ +M+  G   D  T+R LI 
Sbjct: 555 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 614

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+   V+ A   L E+ K+G     S +  VI+ L  + +V  A+ ++ +M+     P
Sbjct: 615 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 674

Query: 536 D--DTVFSTIVKKVA 548
           +  DT+ +   K++A
Sbjct: 675 EVVDTILNADKKEIA 689



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 174/333 (52%), Gaps = 2/333 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++  C +G +  A ++++ MA     PD      +I GL ++  I  A+ V+   +M
Sbjct: 365 NSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM 424

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +PD  T+N ++ G CKR ++ SA+ L++ M   G  PD ITYN++L  +   GK  +
Sbjct: 425 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 484

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               +++ + KGC P  ITY ILIE  C+   +  A +V+  M+ EG  PD V++N+L+ 
Sbjct: 485 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 544

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ G  + A L+   L  +G    + T+NTL+ +   +      +KI D M    H  
Sbjct: 545 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 604

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             +TY +LI+G CK   VDRA     +M+ K   P + T+  V+ +L     + +A+ ++
Sbjct: 605 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 664

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
           H++      P ++  +T+++   K+    K +V
Sbjct: 665 HIMVKIGVVPEVV--DTILNADKKEIAAPKILV 695



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 189/417 (45%), Gaps = 34/417 (8%)

Query: 185 PDTIT--YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
           P TI   Y   +    + G++R A+   + M +  C P    YN I+  + D     QA 
Sbjct: 47  PATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAH 106

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQ-------------------------CGIAR-- 275
             +   L  G  P L T+TI +   C                           CG+    
Sbjct: 107 KVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHG 166

Query: 276 ----AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
               A ++ D M      P++  +N +++  CK+G   +A L++  ++ RGM  N  TYN
Sbjct: 167 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 226

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
             +  L   G      +++D M  A   P V TYN LI GLCK  +   A++   +M+++
Sbjct: 227 IWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 285

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
            C PD  TYNT++   CK  M+ EA +LL         P  +TY +LI+GL  +G +E+A
Sbjct: 286 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 345

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           + L+ +    GI PD + + +L+ G C    +  A+ ++ E+ + G       Y +VI+G
Sbjct: 346 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 405

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           LCK   +  A  V+   I   Y PD   F+T++         + A +L +++ E+ +
Sbjct: 406 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 462


>gi|168049795|ref|XP_001777347.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162671323|gb|EDQ57877.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 621

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 151/447 (33%), Positives = 228/447 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L      G+  +A  L + +      PD      LI  L R  + E A +V+  M
Sbjct: 11  TYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEVVAEM 70

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+  TYN +V  L K GQ   A+ LL EM  +GC PDV TYN ++ T+   G+ 
Sbjct: 71  QAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRL 130

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   + +   +GC P   TY  LI  + K     +A+E+L++M   GC PD++TY+SL
Sbjct: 131 SEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSL 190

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K G+   A  +   +  RG +P+SIT+  L+ +LG  G  D   ++LD M E   
Sbjct: 191 ITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGV 250

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TYN LI G  K G +  A N  ++M    C+PD+VTY+ ++  L K   L+EA Q
Sbjct: 251 KPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQ 310

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +    C P  ITYNTLI+GL K G +  A  L+ +M   G +PD +T+ TLI    
Sbjct: 311 VLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALG 370

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A +VE A  L +E+   G +     Y  +I  L K+ +VD A ++   M      PD  
Sbjct: 371 KAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVI 430

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++  +  +   G  +EA K+++ + E
Sbjct: 431 TYNAFLNSLGRGGRFKEARKIFEDMKE 457



 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 230/450 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +T N ++      G+L++A  L   M  R  +PD     +LI GL ++ R +KA ++L
Sbjct: 113 DVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELL 172

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD +TY+ ++ GL K G+   A  L  EM   G +PD IT+  ++  +   
Sbjct: 173 EEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKA 232

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   A+    +   +G  P ++TY  LI    K   +  A  +LD+M   GC PD+VTY
Sbjct: 233 GRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTY 292

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+    K  + D+A  V+  +   G  P++ITYNTL++ LG  G  +   ++ D M  
Sbjct: 293 SCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKS 352

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P V TY+ LI  L K   V+ A   F +M S   QPD+ TY +++  L K G +++
Sbjct: 353 KGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQVDD 412

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   + G   SP +ITYN  ++ L + G  ++A  ++  M E+G+ PD  T+  L+ 
Sbjct: 413 ADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLL 472

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G  +  +V++A  LLKE+ ++G    +  +   +  L     VD A ++L+   S    P
Sbjct: 473 GLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWP 532

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             + ++ ++  +A  G   EA+   + L E
Sbjct: 533 GASSYNALIDALAKAGRVSEAFNTLEDLKE 562



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 133/443 (30%), Positives = 228/443 (51%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ +    GK   A +++  M  +   P+      L+  L +  + ++A ++L  M  +G
Sbjct: 50  LINSLGRAGKWEAALEVVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNG 109

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD  TYN ++  L K G++  A  L  EM   GC PD  TYN+++  +   G+ ++A+
Sbjct: 110 CVPDVRTYNCLISTLGKAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAM 169

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++  R GCPP ++TY+ LI  + K     +A ++  +M   G  PD +T+ +L++  
Sbjct: 170 ELLEEMERHGCPPDVMTYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDAL 229

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K G+ DDA+ +++ +  RG++P  +TYN L+   G  G       +LD M      P V
Sbjct: 230 GKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDV 289

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ LI GL K   +D A     +M  + C PD +TYNT++  L K G+LN+A +L   
Sbjct: 290 VTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDR 349

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +    C+P ++TY+TLI  L K   +E A VL+ +M   GI PD  T+ ++I    +A Q
Sbjct: 350 MKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTYCSIITVLGKAGQ 409

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V++A  L  E+  +G       Y   ++ L +  +   A ++ E M  S   PD   +  
Sbjct: 410 VDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDA 469

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++  ++     ++A  L ++LIE
Sbjct: 470 LLLGLSKTKEVDDACGLLKELIE 492



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/443 (31%), Positives = 233/443 (52%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++      G+  +A +L+  M     +PD      LI  L +  R+ +A  +   M
Sbjct: 81  TYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGKAGRLSEAFTLFAEM 140

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VPDT TYN ++ GL K G+ + A+ LL+EM   GC PDV+TY++++  +  +G+ 
Sbjct: 141 RERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMTYSSLITGLGKDGET 200

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +++  R+G  P  IT+T L++ + K   +  A+E+LD+M   G  P +VTYN+L
Sbjct: 201 VKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNAL 260

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K G   +A  +++ +   G +P+ +TY+ L+  L      D   ++L  M +   
Sbjct: 261 IAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGC 320

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TYN LINGL K GL++ A   F++M SK C PD+VTY+T++ AL K   +  A  
Sbjct: 321 PPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACV 380

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P L TY ++I  L K G ++ A  L+ +M   G+SPD IT+   +    
Sbjct: 381 LFEEMESVGIQPDLFTYCSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLG 440

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  + +EA  + +++ + G     + Y  ++ GL K+K+VD A  +L+ +I      D  
Sbjct: 441 RGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSL 500

Query: 539 VFSTIVKKVADDGMTEEAYKLWQ 561
            F   ++ +   G  +EA++L Q
Sbjct: 501 KFDECLEILTSWGNVDEAHELLQ 523



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 120/379 (31%), Positives = 202/379 (53%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+ +TYN ++  L K GQ   A  L +E+  +   PDV++Y+ ++ ++   GK++ A+  
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
             +   KGC P L TY  L++ + K      A+ +L +M   GC PD+ TYN L++   K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            G+  +A  +   +  RG  P++ TYN+L++ LG  G      ++L+ M      P V T
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y+ LI GL K G   +A   F +M  +  +PD +T+  ++ AL K G +++AL+LL  + 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P ++TYN LI G  K G + +A  L  +M  NG  PD +T+  LI G  +A Q++
Sbjct: 247 ERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEMKRNGCKPDVVTYSCLITGLIKASQLD 306

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  +LK++ K G       Y  +I+GL K+  ++ A ++ + M S    PD   +ST++
Sbjct: 307 EACQVLKKMEKEGCPPDTITYNTLINGLGKAGLLNDAGRLFDRMKSKGCNPDVVTYSTLI 366

Query: 545 KKVADDGMTEEAYKLWQKL 563
             +      E A  L++++
Sbjct: 367 TALGKAARVESACVLFEEM 385



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 125/397 (31%), Positives = 200/397 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++      G++ DA +L+D M  R   P       LI G  ++  + +A  +L
Sbjct: 218 DSITFTALMDALGKAGRVDDALELLDEMKERGVKPGVVTYNALIAGFGKVGDLVEAYNLL 277

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +G  PD +TY+ ++ GL K  Q+  A  +L +M   GC PD ITYNT++  +   
Sbjct: 278 DEMKRNGCKPDVVTYSCLITGLIKASQLDEACQVLKKMEKEGCPPDTITYNTLINGLGKA 337

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A   +     KGC P ++TY+ LI  + K   +  A  + ++M   G  PD+ TY
Sbjct: 338 GLLNDAGRLFDRMKSKGCNPDVVTYSTLITALGKAARVESACVLFEEMESVGIQPDLFTY 397

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            S++    K G+ DDA  + + +  +G+ P+ ITYN  L+SLG  G +    KI + M E
Sbjct: 398 CSIITVLGKAGQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKE 457

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P V TY+ L+ GL K   VD A     +++ + C  D + ++  L  L   G ++E
Sbjct: 458 SGLLPDVATYDALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDE 517

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +LL   N     P   +YN LID LAK G + +A      + E G  PD +++ +LI 
Sbjct: 518 AHELLQFANSKGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLIS 577

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
              +  Q++ A +LL+E+ KRG K+   +Y  ++  L
Sbjct: 578 ALGQTGQIDTAFELLEEMSKRGLKLSPRSYSNLVRKL 614



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 91/275 (33%), Positives = 149/275 (54%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           SP++VTYNSL+N   K G+ ++A L+   L +    P+ ++Y+ L++SLG  G W+A  +
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           ++  M      P ++TYN L++ L K G  D A+    +M    C PD+ TYN ++  L 
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G L+EA  L   +    C P   TYN+LI GL K G  +KAM L  +M  +G  PD +
Sbjct: 126 KAGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVM 185

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +LI G  +  +  +A  L +E+ +RG K  +  +  ++  L K+ +VD A+++L+ M
Sbjct: 186 TYSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEM 245

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                KP    ++ ++      G   EAY L  ++
Sbjct: 246 KERGVKPGVVTYNALIAGFGKVGDLVEAYNLLDEM 280



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 77/244 (31%), Positives = 133/244 (54%)

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN +TYN+LL++L   G  +    + + +  A  +P V +Y+ LIN L + G  + A+  
Sbjct: 7   PNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALEV 66

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M +K C+P++ TYNT++  L K G  +EAL+LL  +  + C P + TYN LI  L K
Sbjct: 67  VAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLGK 126

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G + +A  L+ +M E G  PD  T+ +LI+G  +  + ++A++LL+E+ + G       
Sbjct: 127 AGRLSEAFTLFAEMRERGCVPDTFTYNSLIYGLGKVGRSQKAMELLEEMERHGCPPDVMT 186

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I GL K  +   A ++ + M     KPD   F+ ++  +   G  ++A +L  ++ 
Sbjct: 187 YSSLITGLGKDGETVKAFKLFQEMKRRGRKPDSITFTALMDALGKAGRVDDALELLDEMK 246

Query: 565 EWKV 568
           E  V
Sbjct: 247 ERGV 250



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 59/212 (27%), Positives = 104/212 (49%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G++ DA +L   M  +   PD       +  L R  R ++A K+ + M  SG +PD  TY
Sbjct: 408 GQVDDADRLFSEMRGKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATY 467

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           + ++ GL K  ++  A  LL E+   GC  D + ++  L  +   G   +A    +    
Sbjct: 468 DALLLGLSKTKEVDDACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANS 527

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           KG  P   +Y  LI+ + K   ++ A   L+D+  +G  PDIV+Y+SL++   + G+ D 
Sbjct: 528 KGLWPGASSYNALIDALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDT 587

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           A  ++  +  RG++ +  +Y+ L+  L   G 
Sbjct: 588 AFELLEEMSKRGLKLSPRSYSNLVRKLQDWGA 619



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 76/137 (55%)

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           SP ++TYN+L++ LAK G  E+A +L+ ++     +PD +++  LI    RA + E A++
Sbjct: 6   SPNVVTYNSLLNALAKAGQCEEAQLLFEELKAAKWTPDVVSYSCLINSLGRAGKWEAALE 65

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           ++ E+  +G K     Y  ++  L K+ + D A+++L  M  +   PD   ++ ++  + 
Sbjct: 66  VVAEMQAKGCKPNLWTYNTLVDCLGKAGQFDEALRLLAEMRDNGCVPDVRTYNCLISTLG 125

Query: 549 DDGMTEEAYKLWQKLIE 565
             G   EA+ L+ ++ E
Sbjct: 126 KAGRLSEAFTLFAEMRE 142



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/190 (23%), Positives = 87/190 (45%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T N  L +    G+  +A K+ + M     +PD      L+ GL +   ++
Sbjct: 422 GKGLSPDVITYNAFLNSLGRGGRFKEARKIFEDMKESGLLPDVATYDALLLGLSKTKEVD 481

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A  +L+ ++  G   D++ ++  +  L   G +  A  LL   +  G  P   +YN ++
Sbjct: 482 DACGLLKELIEQGCAFDSLKFDECLEILTSWGNVDEAHELLQFANSKGLWPGASSYNALI 541

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G+  +A    +D   +G  P +++Y+ LI  + +   I  A E+L++M+  G  
Sbjct: 542 DALAKAGRVSEAFNTLEDLKEQGGKPDIVSYSSLISALGQTGQIDTAFELLEEMSKRGLK 601

Query: 290 PDIVTYNSLV 299
               +Y++LV
Sbjct: 602 LSPRSYSNLV 611


>gi|222636287|gb|EEE66419.1| hypothetical protein OsJ_22769 [Oryza sativa Japonica Group]
          Length = 1393

 Score =  246 bits (629), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 135/429 (31%), Positives = 230/429 (53%), Gaps = 1/429 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  ++  C  G+L +A +L+D M R   +PD      LIRGL +    ++A   L+ M
Sbjct: 223 TYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 281

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G +PD  TYN ++ G CK   ++ A  LL +    G  PD +TY +++  +   G  
Sbjct: 282 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 341

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+  + +   KG  P ++ Y  L++ +C Q  I  A++V+++MA EGC PDI TYN +
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G   DA +V+N+ + +G  P+  T+NTL+     R   D+  ++++ M E   
Sbjct: 402 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   TYN ++NGLCK G V+    +F +M+ K C P+ +TYN ++   C+   + EA +
Sbjct: 462 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 521

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  ++     P  +++NTLI G  + G +E A +L+ ++ E G S    T  TLI  F 
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 581

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
               +  A  +  E+  +G++  +  YR++I G CK+  VD A   L  MI   + P  +
Sbjct: 582 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 641

Query: 539 VFSTIVKKV 547
            F  ++  +
Sbjct: 642 TFGRVINSL 650



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 227/449 (50%), Gaps = 9/449 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINL-IRGLIRIDRIEKASKVLQIMV 179
           NK+L   C RG + +A  L+  + +R    +  F  N+ IRGL    R+ +A +++  M 
Sbjct: 190 NKVLHALCKRGDVLEAGLLLGKVIQRGMSINL-FTYNIWIRGLCEAGRLPEAVRLVDGM- 247

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            +  VPD +TYN ++ GLCK+   + A+  L  M   GC PD  TYNTI+         +
Sbjct: 248 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 307

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A    KD + KG  P  +TY  LI  +C +  + RA+E+ ++   +G  PDIV YNSLV
Sbjct: 308 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 367

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA--- 356
              C QG    A+ V+N +   G  P+  TYN +++ L   G    +     +MN+A   
Sbjct: 368 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG---NISDATVVMNDAIMK 424

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            + P VFT+N LI+G CK   +D A+    +M      PD +TYN+VL  LCK G +NE 
Sbjct: 425 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 484

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +    +    C P  ITYN LI+   +   ME+A  +  +M + G+ PD ++  TLI+G
Sbjct: 485 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 544

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           FCR   +E A  L +++ ++G       +  +I        + MA ++ + M+S  ++ D
Sbjct: 545 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 604

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +  ++         + AY    ++I+
Sbjct: 605 SYTYRVLIDGSCKTANVDRAYMHLVEMIK 633



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 237/456 (51%), Gaps = 11/456 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T+   L++FC   +   A +L+  +  R  +    +C  ++ GL        A 
Sbjct: 116 VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVA---YC-TVVCGLYAHGHTHDAR 171

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M+ +   P+   +N ++  LCKRG +  A  LL ++   G   ++ TYN  +R +
Sbjct: 172 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 231

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            + G+  +A+    D +R    P ++TY  LI  +CK+     A+  L  M  +GC PD 
Sbjct: 232 CEAGRLPEAVRL-VDGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 290

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN++++  CK     +A  ++ + + +G  P+ +TY +L++ L + G    V++ L++
Sbjct: 291 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG---DVERALEL 347

Query: 353 MNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            NEA      P +  YN L+ GLC  GL+  A+   N+M  + C PDI TYN V+  LCK
Sbjct: 348 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 407

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G +++A  +++        P + T+NTLIDG  K+  ++ A+ L  +M E GI+PD IT
Sbjct: 408 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 467

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +++ G C+A +V E  +  +E+  +G       Y ++I   C+S K++ A +V+  M 
Sbjct: 468 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 527

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                PD   F+T++     +G  E AY L+QKL E
Sbjct: 528 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 563



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 230/436 (52%), Gaps = 1/436 (0%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           + G   DA +L D M   +  P+      ++  L +   + +A  +L  ++  G   +  
Sbjct: 163 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF 222

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TYN+ + GLC+ G++  A+ L+D M      PDV+TYNT++R +      ++A+ + +  
Sbjct: 223 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 281

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           + +GC P   TY  +I+  CK   +  A E+L D   +G  PD VTY SL+N  C +G  
Sbjct: 282 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 341

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           + A+ + N   ++G++P+ + YN+L+  L  +G      ++++ M E    P + TYNI+
Sbjct: 342 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 401

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           INGLCK G +  A    N  + K   PD+ T+NT++   CK   L+ ALQL+  +     
Sbjct: 402 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P  ITYN++++GL K G + +    + +M+  G  P+ IT+  LI  FCR++++EEA  
Sbjct: 462 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 521

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           ++ ++ + G      ++  +I+G C++  ++ A  + + +    Y      F+T++   +
Sbjct: 522 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 581

Query: 549 DDGMTEEAYKLWQKLI 564
                  A K++ +++
Sbjct: 582 GKLNMHMAEKIFDEML 597



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 222/435 (51%), Gaps = 2/435 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +++  C +    +A   +  M  +  +PD      +I G  +I  +++A+++L
Sbjct: 254 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 313

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  V  G VPD +TY  ++ GLC  G +  A+ L +E    G +PD++ YN++++ +   
Sbjct: 314 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 373

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A+    +   +GC P + TY I+I  +CK   I+ A  V++D  ++G  PD+ T+
Sbjct: 374 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 433

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK+ K D A+ ++  +   G+ P++ITYN++L+ L   G  + V++    M  
Sbjct: 434 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 493

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TYNILI   C+   ++ A     +M  +   PD V++NT++   C+ G L  
Sbjct: 494 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 553

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   L     S    T+NTLI   + K  M  A  ++ +M+  G   D  T+R LI 
Sbjct: 554 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 613

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+   V+ A   L E+ K+G     S +  VI+ L  + +V  A+ ++ +M+     P
Sbjct: 614 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 673

Query: 536 D--DTVFSTIVKKVA 548
           +  DT+ +   K++A
Sbjct: 674 EVVDTILNADKKEIA 688



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 99/333 (29%), Positives = 174/333 (52%), Gaps = 2/333 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++  C +G +  A ++++ MA     PD      +I GL ++  I  A+ V+   +M
Sbjct: 364 NSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIM 423

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +PD  T+N ++ G CKR ++ SA+ L++ M   G  PD ITYN++L  +   GK  +
Sbjct: 424 KGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNE 483

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               +++ + KGC P  ITY ILIE  C+   +  A +V+  M+ EG  PD V++N+L+ 
Sbjct: 484 VNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIY 543

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ G  + A L+   L  +G    + T+NTL+ +   +      +KI D M    H  
Sbjct: 544 GFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRA 603

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             +TY +LI+G CK   VDRA     +M+ K   P + T+  V+ +L     + +A+ ++
Sbjct: 604 DSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGII 663

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
           H++      P ++  +T+++   K+    K +V
Sbjct: 664 HIMVKIGVVPEVV--DTILNADKKEIAAPKILV 694



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 189/417 (45%), Gaps = 34/417 (8%)

Query: 185 PDTIT--YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
           P TI   Y   +    + G++R A+   + M +  C P    YN I+  + D     QA 
Sbjct: 46  PATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAH 105

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQ-------------------------CGIAR-- 275
             +   L  G  P L T+TI +   C                           CG+    
Sbjct: 106 KVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHG 165

Query: 276 ----AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
               A ++ D M      P++  +N +++  CK+G   +A L++  ++ RGM  N  TYN
Sbjct: 166 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 225

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
             +  L   G      +++D M  A   P V TYN LI GLCK  +   A++   +M+++
Sbjct: 226 IWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 284

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
            C PD  TYNT++   CK  M+ EA +LL         P  +TY +LI+GL  +G +E+A
Sbjct: 285 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 344

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           + L+ +    GI PD + + +L+ G C    +  A+ ++ E+ + G       Y +VI+G
Sbjct: 345 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 404

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           LCK   +  A  V+   I   Y PD   F+T++         + A +L +++ E+ +
Sbjct: 405 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 461


>gi|302787647|ref|XP_002975593.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
 gi|300156594|gb|EFJ23222.1| hypothetical protein SELMODRAFT_103638 [Selaginella moellendorffii]
          Length = 471

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/444 (30%), Positives = 241/444 (54%), Gaps = 1/444 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L++FC +GKL D  KL + M      PD      LI G  +  R+++A+++ + MV  G
Sbjct: 14  VLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRLYEEMVSVG 73

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P   TYN ++   CK  +++ A+ L   M+  G EPDV+TY+TI+  +   GK  +A+
Sbjct: 74  LEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEAL 133

Query: 243 G-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +   + +GC    + Y  LI  +CK   I RA ++L++MA +G  PD +TYN++++ 
Sbjct: 134 EMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSG 193

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+ GK  +A    +++ SRG  P+ + YN LL +L   G  D   K+   +    + P 
Sbjct: 194 LCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPD 253

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TYN ++ GL +   +D A   F +MV+  C P+  TY+ VL   C+   +++A ++L 
Sbjct: 254 TVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLE 313

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++     P ++TYN L+DGL K   ++KA  L+  M++NG +PD +++  ++ G C+ +
Sbjct: 314 EMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTN 373

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V +A  L   + +R        + +++ GLCK+ K+D A  +L+ M  S   PD   ++
Sbjct: 374 KVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYN 433

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
           T++  +   G   +A +L Q + E
Sbjct: 434 TLMNGLRKQGRHIQADRLTQAMKE 457



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 116/385 (30%), Positives = 215/385 (55%), Gaps = 1/385 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+  T+ +++   CK+G++R    L ++M  +G  PD I YN ++      G+  +A   
Sbjct: 6   PNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEANRL 65

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           +++ +  G  P + TY  L+   CK+  +  A+E+   MA +G  PD+VTY+++++  CK
Sbjct: 66  YEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCK 125

Query: 305 QGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
            GK  +A+ ++ + ++ RG   N++ YN L++ L      +   K+L+ M    + P   
Sbjct: 126 TGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNI 185

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN +++GLC+ G V  A   F+ M S+   PD+V YN +L AL KEG  +EA++L   +
Sbjct: 186 TYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDV 245

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P  +TYN+++ GLA+K  M++A  ++ +M+ +G +P+  T+  ++ G CRA +V
Sbjct: 246 IAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKV 305

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           ++A  +L+E+ K G       Y +++ GLCK+  VD A ++   M+ +   PD   +S +
Sbjct: 306 DDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVV 365

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKV 568
           +  +       +A  L+ ++IE K+
Sbjct: 366 LNGLCKTNKVHDARVLFDRMIERKL 390



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/380 (33%), Positives = 204/380 (53%), Gaps = 1/380 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL-QI 177
           T N +L  FC   K+ +A +L   MA +   PD      +I GL +  ++ +A ++L   
Sbjct: 80  TYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGLCKTGKVTEALEMLFHK 139

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G   +T+ YN ++ GLCK   I  A  LL+EM+  G  PD ITYNTIL  +   GK
Sbjct: 140 MIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPDNITYNTILSGLCRMGK 199

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A  F+     +G  P ++ Y  L++ + K+     A+++  D+  +G  PD VTYNS
Sbjct: 200 VSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFKDVIAKGYMPDTVTYNS 259

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++    ++   D+A  +   +++ G  PN  TY+ +L         D   K+L+ M++  
Sbjct: 260 ILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAKKVDDAHKVLEEMSKIG 319

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TYNIL++GLCK  LVD+A   F+ MV   C PDIV+Y+ VL  LCK   +++A 
Sbjct: 320 AVPDVVTYNILLDGLCKTNLVDKAHELFSTMVDNGCAPDIVSYSVVLNGLCKTNKVHDAR 379

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            L   +      P ++T+N L+DGL K G +++A  L  QM  +G +PD + + TL+ G 
Sbjct: 380 VLFDRMIERKLVPDVVTFNILMDGLCKAGKLDEAKDLLDQMTCSGCAPDYVAYNTLMNGL 439

Query: 478 CRADQVEEAVDLLKEIGKRG 497
            +  +  +A  L + + ++G
Sbjct: 440 RKQGRHIQADRLTQAMKEKG 459



 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/354 (33%), Positives = 188/354 (53%), Gaps = 1/354 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDA-SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           E D  T + I+   C  GK+T+A   L   M  R    +      LI GL + + IE+A 
Sbjct: 110 EPDVVTYSTIISGLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAY 169

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L+ M   G VPD ITYN ++ GLC+ G++  A    D M   G  PDV+ YN +L  +
Sbjct: 170 KLLEEMASKGYVPDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDAL 229

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           +  GK  +A+  +KD + KG  P  +TY  ++  + ++  +  A E+   M   GC+P+ 
Sbjct: 230 YKEGKTDEAMKLFKDVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNG 289

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY+ +++  C+  K DDA  V+  +   G  P+ +TYN LL  L      D   ++   
Sbjct: 290 ATYSIVLSGHCRAKKVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFST 349

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +   +P + +Y++++NGLCK   V  A   F++M+ +   PD+VT+N ++  LCK G 
Sbjct: 350 MVDNGCAPDIVSYSVVLNGLCKTNKVHDARVLFDRMIERKLVPDVVTFNILMDGLCKAGK 409

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           L+EA  LL  +  S C+P  + YNTL++GL K+G   +A  L   M E G   D
Sbjct: 410 LDEAKDLLDQMTCSGCAPDYVAYNTLMNGLRKQGRHIQADRLTQAMKEKGFLSD 463



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 187/349 (53%), Gaps = 1/349 (0%)

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C P+  T+  +L++    GK +     ++  L  G  P  I Y ILI+   K+  +  A 
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + ++M   G  P I TYNSL+N  CK+ K  +A+ +   +  +G EP+ +TY+T++  L
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 338 GSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              G   +A++ +   M E   S     YN LINGLCK   ++RA     +M SK   PD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            +TYNT+L  LC+ G ++EA Q    +     SP ++ YN L+D L K+G  ++AM L+ 
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            ++  G  PD +T+ +++ G  R   ++EA ++ K++   G     + Y +V+ G C++K
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGATYSIVLSGHCRAK 303

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           KVD A +VLE M      PD   ++ ++  +    + ++A++L+  +++
Sbjct: 304 KVDDAHKVLEEMSKIGAVPDVVTYNILLDGLCKTNLVDKAHELFSTMVD 352



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 92/288 (31%), Positives = 152/288 (52%), Gaps = 1/288 (0%)

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           CSP+  T+  ++   CKQGK  D   +   +L  G+ P+ I YN L+     +G  D  +
Sbjct: 4   CSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDEAN 63

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++ + M      P+++TYN L+N  CK   +  A+  F  M  K  +PD+VTY+T++  L
Sbjct: 64  RLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIISGL 123

Query: 408 CKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           CK G + EAL++L H +    CS   + YN LI+GL K   +E+A  L  +M   G  PD
Sbjct: 124 CKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYVPD 183

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           +IT+ T++ G CR  +V EA      +  RG      AY  ++  L K  K D A+++ +
Sbjct: 184 NITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKLFK 243

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            +I+  Y PD   +++I+  +A     +EA ++++K++       G T
Sbjct: 244 DVIAKGYMPDTVTYNSILLGLARKSNMDEAEEMFKKMVASGCAPNGAT 291



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 84/245 (34%), Positives = 134/245 (54%), Gaps = 1/245 (0%)

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           R   PN  T+  +L S   +G      K+ + M +   SP    YNILI+G  K G VD 
Sbjct: 2   RECSPNRYTFRVVLKSFCKQGKLRDGYKLFEQMLDNGISPDGIEYNILIDGYAKKGRVDE 61

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A   + +MVS   +P I TYN++L A CKE  + EA++L   +      P ++TY+T+I 
Sbjct: 62  ANRLYEEMVSVGLEPSIYTYNSLLNAFCKETKMKEAMELFKTMAEKGFEPDVVTYSTIIS 121

Query: 441 GLAKKGCMEKAM-VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           GL K G + +A+ +L+ +M+E G S + + +  LI G C+ + +E A  LL+E+  +G  
Sbjct: 122 GLCKTGKVTEALEMLFHKMIERGCSANTVAYNALINGLCKDENIERAYKLLEEMASKGYV 181

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             N  Y  ++ GLC+  KV  A Q  + M S  Y PD   ++ ++  +  +G T+EA KL
Sbjct: 182 PDNITYNTILSGLCRMGKVSEAKQFFDSMPSRGYSPDVVAYNGLLDALYKEGKTDEAMKL 241

Query: 560 WQKLI 564
           ++ +I
Sbjct: 242 FKDVI 246


>gi|224109690|ref|XP_002315278.1| predicted protein [Populus trichocarpa]
 gi|222864318|gb|EEF01449.1| predicted protein [Populus trichocarpa]
          Length = 728

 Score =  246 bits (628), Expect = 2e-62,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 238/450 (52%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N IL   C +G+L +A  L+  M  +   P+      L+ G  R+  +++A+ V+
Sbjct: 231 DNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVI 290

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M  +  VPD  TYN+M+ G CK+G+I  A+ L +EM      PDV+TYNT++   F++
Sbjct: 291 ELMSQNSVVPDAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEH 350

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++     ++   +G  P  +TY ++++   K+  +    + +  M   GC PDIVTY
Sbjct: 351 GSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTY 410

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+++ CK GK D+A  +++ +  +G++ + +T NT+L +L      D    +L     
Sbjct: 411 NTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARR 470

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             +     +Y  LI G  K+    +A+  +++M  K   P I+TYN+++  LC+ G  N+
Sbjct: 471 RGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQ 530

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+  L  L  S   P  ITYNT+I G  ++G +EKA   + +M+E    PD +T  TL+ 
Sbjct: 531 AIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLC 590

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+   +E+A+ L      +G  +   +Y  +I  LCK K+   A  +LE M   +  P
Sbjct: 591 GLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGP 650

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   ++ I+  + D G  ++A +   K+ E
Sbjct: 651 DCYTYNAILGGLTDAGRMKDAEEFISKIAE 680



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 139/407 (34%), Positives = 213/407 (52%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI G    +R  +A +VL  M   G  PD ITYN ++ GLCK+G++  A  LL +M   G
Sbjct: 203 LIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKG 262

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P+  T+N ++      G  K+A    +   +    P   TY ++I   CKQ  IA A+
Sbjct: 263 LFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMISGFCKQGRIAEAM 322

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + ++M     SPD+VTYN+L+N   + G  ++   +I  +  RGM+PNS+TYN ++   
Sbjct: 323 RLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWF 382

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             +G  D VDK +  M E+   P + TYN LI+  CK G +D A    ++M  K  + D 
Sbjct: 383 VKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDD 442

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VT NT+L ALC+E  L+EA  LL            ++Y TLI G  K     +A+ L+ +
Sbjct: 443 VTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDE 502

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M E  I P  IT+ ++I G C+  +  +A+D L E+ + G       Y  +IHG C+  +
Sbjct: 503 MKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQ 562

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           V+ A Q    M+   +KPD    +T++  +  +GM E+A KL+   I
Sbjct: 563 VEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWI 609



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 201/383 (52%), Gaps = 2/383 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  FC +G++ +A +L + M      PD      LI G       E+  K++
Sbjct: 301 DAWTYNVMISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLI 360

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  P+++TYN+MV    K+G++      + +M  SGC PD++TYNT++      
Sbjct: 361 EEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKV 420

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A     +  RKG     +T   ++  +C++  +  A ++L      G   D V+Y
Sbjct: 421 GKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSY 480

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILDIMN 354
            +L+    K  K   A+ + + +  + + P+ ITYN+++  L   G  + A+DK LD + 
Sbjct: 481 GTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDK-LDELL 539

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E+   P   TYN +I+G C+ G V++A    N+MV KN +PD+VT NT+L  LCKEGML 
Sbjct: 540 ESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLE 599

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +AL+L +           ++YNT+I  L K+    +A  L  +M E  + PD  T+  ++
Sbjct: 600 KALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAIL 659

Query: 475 WGFCRADQVEEAVDLLKEIGKRG 497
            G   A ++++A + + +I ++G
Sbjct: 660 GGLTDAGRMKDAEEFISKIAEKG 682



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 195/381 (51%), Gaps = 3/381 (0%)

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF---DNGKFKQAIGFWKD 247
           ++ +G     G+   A  + + M   G +P ++T NT+L  +     +   + +   + D
Sbjct: 128 DISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTD 187

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            ++ G      ++ ILI   C +     AI VL  M   GC PD +TYN++++  CK+G+
Sbjct: 188 FIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGR 247

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            ++A  ++ ++ ++G+ PN  T+N L+      G       ++++M++ S  P  +TYN+
Sbjct: 248 LNEARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNV 307

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +I+G CK G +  A+    +M +    PD+VTYNT++    + G   E  +L+  + G  
Sbjct: 308 MISGFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRG 367

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P  +TYN ++    KKG M++      +M E+G  PD +T+ TLI   C+  +++EA 
Sbjct: 368 MKPNSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAF 427

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L+ E+G++G KM +     ++  LC+ +K+D A  +L       Y  D+  + T++   
Sbjct: 428 RLMDEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGY 487

Query: 548 ADDGMTEEAYKLWQKLIEWKV 568
                  +A +LW ++ E ++
Sbjct: 488 FKHEKASQALRLWDEMKEKEI 508



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 108/353 (30%), Positives = 179/353 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++      G   +  KLI+ M  R   P+      +++  ++  ++++  K +
Sbjct: 336 DVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKPNSVTYNVMVKWFVKKGKMDEVDKTV 395

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  SG +PD +TYN ++   CK G++  A  L+DEM   G + D +T NT+LR +   
Sbjct: 396 RKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLMDEMGRKGLKMDDVTLNTMLRALCRE 455

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  +A        R+G     ++Y  LI    K    ++A+ + D+M  +   P I+TY
Sbjct: 456 RKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLWDEMKEKEIIPSIITY 515

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NS++   C+ GK + A+  ++ LL  G+ P+ ITYNT++H     G  +   +  + M E
Sbjct: 516 NSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQEGQVEKAFQFHNKMVE 575

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P V T N L+ GLCK G++++A+  FN  +SK    D V+YNT++ +LCKE    E
Sbjct: 576 KNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSYNTIILSLCKEKRFGE 635

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           A  LL  +      P   TYN ++ GL   G M+ A     ++ E G S +  
Sbjct: 636 AFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAEKGKSENQF 688



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 206/445 (46%), Gaps = 38/445 (8%)

Query: 159 IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK---RGQIRSAIALLDEMSV 215
           I   +   R  +A+++   M   G  P  +T N ++  L +      IR + A+  +   
Sbjct: 131 IGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLLNALVRFPSSHSIRLSKAVFTDFIK 190

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G + +  ++N ++       +F +AI         GCPP  ITY  +++ +CK+  +  
Sbjct: 191 IGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDYGCPPDNITYNTILDGLCKKGRLNE 250

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A ++L DM  +G  P+  T+N LV   C+ G   +A  VI  +    + P++ TYN ++ 
Sbjct: 251 ARDLLLDMKNKGLFPNRTTFNILVVGCCRLGWLKEAANVIELMSQNSVVPDAWTYNVMIS 310

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               +G      ++ + M     SP V TYN LING  ++G  +       +M  +  +P
Sbjct: 311 GFCKQGRIAEAMRLREEMENLKLSPDVVTYNTLINGCFEHGSSEEGFKLIEEMEGRGMKP 370

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           + VTYN ++    K+G ++E  + +  +  S C P ++TYNTLI    K G M++A  L 
Sbjct: 371 NSVTYNVMVKWFVKKGKMDEVDKTVRKMEESGCLPDIVTYNTLISWHCKVGKMDEAFRLM 430

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG------------------ 497
            +M   G+  DD+T  T++   CR  +++EA DLL    +RG                  
Sbjct: 431 DEMGRKGLKMDDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKH 490

Query: 498 ----------NKMRNS-------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
                     ++M+          Y  +I GLC+  K + AI  L+ ++ S   PD+  +
Sbjct: 491 EKASQALRLWDEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITY 550

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           +TI+     +G  E+A++   K++E
Sbjct: 551 NTIIHGYCQEGQVEKAFQFHNKMVE 575



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 75/296 (25%), Positives = 138/296 (46%), Gaps = 12/296 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T N +L+  C   KL +A  L+    RR    D      LI G  + ++  +A ++ 
Sbjct: 441 DDVTLNTMLRALCRERKLDEAHDLLCSARRRGYFVDEVSYGTLIIGYFKHEKASQALRLW 500

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M     +P  ITYN M+ GLC+ G+   AI  LDE+  SG  PD ITYNTI+      
Sbjct: 501 DEMKEKEIIPSIITYNSMIAGLCQMGKTNQAIDKLDELLESGLVPDEITYNTIIHGYCQE 560

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ ++A  F    + K   P ++T   L+  +CK+  + +A+++ +    +G   D V+Y
Sbjct: 561 GQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLFNTWISKGKDVDAVSY 620

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++   CK+ ++ +A  ++  +  + + P+  TYN +L  L   G     ++ +  + E
Sbjct: 621 NTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDAGRMKDAEEFISKIAE 680

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
              S   F              + +  ++    + +   P+ + Y+  +  LC +G
Sbjct: 681 KGKSENQFLE------------LGKRQDARTSEIPQEPHPNAIAYSNKINELCSQG 724



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 59/195 (30%), Positives = 90/195 (46%), Gaps = 12/195 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T N I+  +C  G++  A +  + M  +N  PD   C  L+ GL +   +EKA K+ 
Sbjct: 546 DEITYNTIIHGYCQEGQVEKAFQFHNKMVEKNFKPDVVTCNTLLCGLCKEGMLEKALKLF 605

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              +  G   D ++YN ++  LCK  +   A  LL+EM      PD  TYN IL  + D 
Sbjct: 606 NTWISKGKDVDAVSYNTIILSLCKEKRFGEAFDLLEEMEEKKLGPDCYTYNAILGGLTDA 665

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K A  F      KG      +    +E   +Q   AR  E+  +       P+ + Y
Sbjct: 666 GRMKDAEEFISKIAEKG-----KSENQFLELGKRQ--DARTSEIPQEP-----HPNAIAY 713

Query: 296 NSLVNFSCKQGKYDD 310
           ++ +N  C QG+Y D
Sbjct: 714 SNKINELCSQGRYKD 728



 Score = 44.3 bits (103), Expect = 0.19,   Method: Compositional matrix adjust.
 Identities = 39/164 (23%), Positives = 69/164 (42%), Gaps = 7/164 (4%)

Query: 419 LLHLLNGSSCSPCLITYNTLID----GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           LLH    ++   CL     L+D         G   +A  ++ +M   G+ P  +T  TL+
Sbjct: 107 LLHPQKTNNPVSCLHISKPLLDISIGAYVACGRPHQAAQIFNRMKRLGMQPTLLTCNTLL 166

Query: 475 WGFCR---ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
               R   +  +  +  +  +  K G K+  +++ ++IHG C   +   AI+VL  M   
Sbjct: 167 NALVRFPSSHSIRLSKAVFTDFIKIGVKINTNSFNILIHGSCMENRFGEAIRVLGKMRDY 226

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
              PD+  ++TI+  +   G   EA  L   +    +F   TT 
Sbjct: 227 GCPPDNITYNTILDGLCKKGRLNEARDLLLDMKNKGLFPNRTTF 270


>gi|346703131|emb|CBX25230.1| hypothetical_protein [Oryza brachyantha]
          Length = 746

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 142/454 (31%), Positives = 239/454 (52%), Gaps = 6/454 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    N +L       K+     +   M  R   PD      L++ L R  ++  A 
Sbjct: 146 IQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRAHQVRTAV 205

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ M  SG  PD  T+  ++ G  + G I++A+ +   M   GC P  +T N ++   
Sbjct: 206 LMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTVNVLINGY 265

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+ + A+G+ + ++  G  P  ITY   +  +C+   +  A++V+D M  EG  PD+
Sbjct: 266 CKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQEGHDPDV 325

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN +VN  CK G+ ++A  ++N ++ RG  P+  T+NTL+ +L S    + +++ LD+
Sbjct: 326 FTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCS---GNRLEEALDL 382

Query: 353 MNEAS---HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
             + +    SP V+T+NILIN LCK G    A+  F +M S  C PD VTYNT++  LC 
Sbjct: 383 ARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLIDNLCS 442

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G L +AL LL  +  + C    +TYNT+IDGL KK  +E+A  ++ QM   GIS + IT
Sbjct: 443 LGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNAIT 502

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             TLI G C+  ++++A  L+ ++   G +  N  Y  ++   CK   +  A  +L+ M 
Sbjct: 503 FNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAADILQTMT 562

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++ ++ D   + T++  +   G T+ A KL + +
Sbjct: 563 ANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGM 596



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 129/389 (33%), Positives = 212/389 (54%)

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q+  + G   DT+ YN ++  L +  +++    +  EM   G +PDV+T+NT+++ +   
Sbjct: 139 QLDPLFGIQADTVVYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFNTLMKALCRA 198

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + + A+   ++    G  P   T+T L++   ++  I  A+ V   M   GCSP  VT 
Sbjct: 199 HQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEMGCSPTKVTV 258

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK G+ +DA+  I   ++ G EP+ ITYNT ++ L   G      K++D+M +
Sbjct: 259 NVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVMVQ 318

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             H P VFTYNI++N LCK G ++ A    NQMV + C PDI T+NT++ ALC    L E
Sbjct: 319 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRLEE 378

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL L   +     SP + T+N LI+ L K G  + A+ L+ +M  +G +PD++T+ TLI 
Sbjct: 379 ALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTLID 438

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             C   ++ +A+DLLKE+   G       Y  +I GLCK  +++ A +V + M       
Sbjct: 439 NLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 498

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +   F+T++  +  D   ++A +L  ++I
Sbjct: 499 NAITFNTLIDGLCKDKRIDDANQLISQMI 527



 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 229/448 (51%), Gaps = 1/448 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++ DA   I         PD       + GL +   +  A KV+ +M
Sbjct: 257 TVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHALKVMDVM 316

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD  TYN++V  LCK GQ+  A  +L++M   GC PD+ T+NT++  +    + 
Sbjct: 317 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTFNTLIVALCSGNRL 376

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+   +    KG  P + T+ ILI  +CK      A+ + ++M   GC+PD VTYN+L
Sbjct: 377 EEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKSSGCTPDEVTYNTL 436

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  GK   A+ ++  + S G   +++TYNT++  L  +   +  +++ D M+    
Sbjct: 437 IDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 496

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S    T+N LI+GLCK   +D A    +QM+S+  QP+ +TYN++L   CK+G + +A  
Sbjct: 497 SRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 556

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +  +     ++TY TLI+GL K G  + A+ L   M   G+      +  +I    
Sbjct: 557 ILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRATPKAYNPVIQSLF 616

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-SKKVDMAIQVLELMISSRYKPDD 537
           R +   +A++L +E+ + G       Y++V  GLC+    +  A   L  M+   + P+ 
Sbjct: 617 RRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDFLLEMVDKGFIPEF 676

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + F  + + + + GM +   +  + +IE
Sbjct: 677 SSFRMLAEGLLNLGMDDYFIRAIEIIIE 704



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 117/383 (30%), Positives = 190/383 (49%), Gaps = 13/383 (3%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           + ++ HDP            D  T N ++   C  G+L +A  +++ M  R  +PD    
Sbjct: 316 MVQEGHDP------------DVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTF 363

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
             LI  L   +R+E+A  + + + + G  PD  T+N+++  LCK G  + A+ L +EM  
Sbjct: 364 NTLIVALCSGNRLEEALDLARQVTLKGLSPDVYTFNILINALCKVGDPQLALRLFEEMKS 423

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
           SGC PD +TYNT++  +   GK  +A+   K+    GCP   +TY  +I+ +CK+  I  
Sbjct: 424 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKEMESAGCPRSTVTYNTIIDGLCKKMRIEE 483

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A EV D M ++G S + +T+N+L++  CK  + DDA  +I+ ++S G++PN+ITYN++L 
Sbjct: 484 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKRIDDANQLISQMISEGLQPNNITYNSILT 543

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               +G       IL  M        V TY  LINGLCK G    A+     M  K  + 
Sbjct: 544 HYCKQGDIKKAADILQTMTANGFEVDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGMRA 603

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK-KGCMEKAMVL 454
               YN V+ +L +     +A+ L   +      P   TY  +  GL +  G + +A   
Sbjct: 604 TPKAYNPVIQSLFRRNNTRDAMNLFREMTEVGEPPDAFTYKIVFRGLCRGGGSIREAFDF 663

Query: 455 YGQMMENGISPDDITHRTLIWGF 477
             +M++ G  P+  + R L  G 
Sbjct: 664 LLEMVDKGFIPEFSSFRMLAEGL 686



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/234 (27%), Positives = 128/234 (54%), Gaps = 3/234 (1%)

Query: 344 DAVDKILDIMNE--ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
           DAVD +L+ ++      + TV  YN L+N L +   +      +++M  +  +PD+VT+N
Sbjct: 131 DAVDLVLNQLDPLFGIQADTV-VYNHLLNVLVEGSKMKLLETVYSEMGERGIKPDVVTFN 189

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           T++ ALC+   +  A+ +L  ++ S  +P   T+ TL+ G  ++G ++ A+ +  +M+E 
Sbjct: 190 TLMKALCRAHQVRTAVLMLEEMSSSGVAPDETTFTTLMQGFVEEGSIKAALRVKARMLEM 249

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G SP  +T   LI G+C+  +VE+A+  +++    G +     Y   ++GLC++  V  A
Sbjct: 250 GCSPTKVTVNVLINGYCKLGRVEDALGYIQQEIANGFEPDQITYNTFVNGLCQNGHVGHA 309

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           ++V+++M+   + PD   ++ +V  +  +G  EEA  +  +++E       TT 
Sbjct: 310 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVERGCLPDITTF 363


>gi|302784458|ref|XP_002974001.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
 gi|300158333|gb|EFJ24956.1| hypothetical protein SELMODRAFT_100394 [Selaginella moellendorffii]
          Length = 561

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 135/466 (28%), Positives = 241/466 (51%), Gaps = 8/466 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T   ++   C  GKL  A +L+D M  R   P       +I+GL +  R   A    
Sbjct: 29  NEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHNGVIKGLCKAGRFGDALGYF 88

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFD 234
           + +  +   PD IT+N++V  L K G++  A  + + M  S  C P+V+TY T++  +  
Sbjct: 89  KTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCK 148

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +GK  +AI         GC P +ITY++L+E +CK     +   +L +M   G  PD++ 
Sbjct: 149 DGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIM 208

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N  CK  + D+A+ ++  ++  G  P  +TYN+L+         D   +++ +M+
Sbjct: 209 YNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMS 268

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM-- 412
           E    P V  YN +I GLC+   +D A     QMV+  C PD++TY+T++  LCK+    
Sbjct: 269 ERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKDWRVD 328

Query: 413 ----LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
               L  A ++L ++  + C P   TY  +I+GL +    ++A+ L  +M+++ + PD  
Sbjct: 329 ADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLS 388

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           +   +I   C++  ++ A  +   + +R  K    AY  +I GL K  +VD A++V ELM
Sbjct: 389 SFSMVIGSLCKSHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELM 448

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           + S ++P    +++++  +   G  EEA ++ + +I  + F  G +
Sbjct: 449 VES-FRPGVATYNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGAS 493



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 128/406 (31%), Positives = 214/406 (52%), Gaps = 7/406 (1%)

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           R  +  + +Q+      VP+  TY  ++ GLCK G++  A  LLDEM   G  P V  +N
Sbjct: 10  RAGQHGQAVQLFREERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPGVAVHN 69

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            +++ +   G+F  A+G++K      C P +IT+ IL++ + K   +  A ++ + M   
Sbjct: 70  GVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFESMHTS 129

Query: 287 G-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
             C P++VTY +++N  CK GK D A+ +++ +   G  PN ITY+ L+  L   G  D 
Sbjct: 130 SQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKAGRTDK 189

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              +L  M      P V  YN L+NGLCK   +D A+     M+   C P +VTYN+++ 
Sbjct: 190 GFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTYNSLME 249

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             C+   ++ A +L+ +++   C P +I YNT+I GL +   ++ A  L  QM+     P
Sbjct: 250 LFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVAARCVP 309

Query: 466 DDITHRTLIWGFCR-----AD-QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           D IT+ T+I G C+     AD ++E A ++L+ + + G       Y +VI GLC+++K  
Sbjct: 310 DVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCRARKSQ 369

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            A+ +L  MI S   PD + FS ++  +      + AYK++  + E
Sbjct: 370 QALALLRRMIDSEVVPDLSSFSMVIGSLCKSHDLDAAYKIFGMMSE 415



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 252/463 (54%), Gaps = 12/463 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N ++      G++ +A ++ + M   +Q +P+      +I GL +  ++++A ++L +
Sbjct: 102 TFNILVDALVKSGRVEEAFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDL 161

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  +G  P+ ITY+++V GLCK G+      LL EM+  G +PDVI YNT+L  +  + +
Sbjct: 162 MNETGCCPNVITYSVLVEGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRR 221

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+   +  +R GC P ++TY  L+E  C+   + RA  ++  M+  GC PD++ YN+
Sbjct: 222 LDEALELVQLMIRSGCYPTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNT 281

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW--------DAVDKI 349
           ++   C+  + DDA  ++  +++    P+ ITY+T++  L     W        +A  +I
Sbjct: 282 VIAGLCRDARLDDAQALLKQMVAARCVPDVITYSTIIDGLCKD--WRVDADWKLEAACEI 339

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L++M +    P   TY ++I GLC+     +A+    +M+     PD+ +++ V+G+LCK
Sbjct: 340 LEMMKQTGCPPNAGTYAVVIEGLCRARKSQQALALLRRMIDSEVVPDLSSFSMVIGSLCK 399

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              L+ A ++  +++   C P  + Y  LIDGL+K G ++KA+ ++  M+E+   P   T
Sbjct: 400 SHDLDAAYKIFGMMSERECKPNPVAYAALIDGLSKGGEVDKAVRVFELMVES-FRPGVAT 458

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +++ G C   ++EEAV +++ +  +      ++Y  +I GLC+   V+ A ++ + + 
Sbjct: 459 YNSVLDGLCGVGRIEEAVRMVEGMIHKECFPDGASYGALIRGLCRVSCVEEAYELFQAVE 518

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
           +  +  +  V++ +V ++       +A+ +  KLIE    ++G
Sbjct: 519 AKGFAMEVGVYNVLVNELCKKKRLSDAHGVANKLIEAGYKQQG 561



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 116/379 (30%), Positives = 200/379 (52%), Gaps = 10/379 (2%)

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           L + GQ   A+ L  E     C P+  TY +++  +   GK  QA     +   +G PP 
Sbjct: 8   LVRAGQHGQAVQLFRE---ERCVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRDRGIPPG 64

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           +  +  +I+ +CK      A+     +A   C+PDI+T+N LV+   K G+ ++A  +  
Sbjct: 65  VAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEEAFQIFE 124

Query: 317 NL-LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           ++  S    PN +TY T+++ L   G  D   ++LD+MNE    P V TY++L+ GLCK 
Sbjct: 125 SMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLVEGLCKA 184

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G  D+      +M  +  QPD++ YNT+L  LCK   L+EAL+L+ L+  S C P ++TY
Sbjct: 185 GRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCYPTVVTY 244

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           N+L++   +   +++A  L   M E G  PD I + T+I G CR  ++++A  LLK++  
Sbjct: 245 NSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQALLKQMVA 304

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVD------MAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
                    Y  +I GLCK  +VD       A ++LE+M  +   P+   ++ +++ +  
Sbjct: 305 ARCVPDVITYSTIIDGLCKDWRVDADWKLEAACEILEMMKQTGCPPNAGTYAVVIEGLCR 364

Query: 550 DGMTEEAYKLWQKLIEWKV 568
              +++A  L +++I+ +V
Sbjct: 365 ARKSQQALALLRRMIDSEV 383



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 108/344 (31%), Positives = 184/344 (53%), Gaps = 13/344 (3%)

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N  L  +   G+  QA+  ++++    C P   TY  LI  +CK   + +A E+LD+M  
Sbjct: 2   NCALNLLVRAGQHGQAVQLFREER---CVPNEFTYGSLIHGLCKAGKLDQAYELLDEMRD 58

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
            G  P +  +N ++   CK G++ DA+     +      P+ IT+N L+ +L   G  + 
Sbjct: 59  RGIPPGVAVHNGVIKGLCKAGRFGDALGYFKTVAGTKCTPDIITFNILVDALVKSGRVEE 118

Query: 346 VDKILDIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
             +I + M+ +S   P V TY  +INGLCK G +DRAI   + M    C P+++TY+ ++
Sbjct: 119 AFQIFESMHTSSQCLPNVVTYTTVINGLCKDGKLDRAIELLDLMNETGCCPNVITYSVLV 178

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LCK G  ++   LL  +      P +I YNTL++GL K   +++A+ L   M+ +G  
Sbjct: 179 EGLCKAGRTDKGFTLLQEMTRRGFQPDVIMYNTLLNGLCKSRRLDEALELVQLMIRSGCY 238

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P  +T+ +L+  FCR+ QV+ A  L++ + +RG       Y  VI GLC+  ++D A  +
Sbjct: 239 PTVVTYNSLMELFCRSKQVDRAFRLIQVMSERGCPPDVINYNTVIAGLCRDARLDDAQAL 298

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           L+ M+++R  PD   +STI+     DG+ ++    W+   +WK+
Sbjct: 299 LKQMVAARCVPDVITYSTII-----DGLCKD----WRVDADWKL 333


>gi|242039015|ref|XP_002466902.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
 gi|241920756|gb|EER93900.1| hypothetical protein SORBIDRAFT_01g016180 [Sorghum bicolor]
          Length = 653

 Score =  245 bits (626), Expect = 4e-62,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 242/456 (53%), Gaps = 5/456 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCINLIRGLIRIDRIE 169
           V  +  T   +++  C+RG++ DA  ++D M RR   P    +H  +             
Sbjct: 111 VPPNAYTYFPVVRALCARGRIADALSVLDEMRRRGCAPIPPMYHVILEAACSRGGGGGFR 170

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRG-QIRSAIALLDEMSVS-GCEPDVITYNT 227
            A +VLQ +   G   D    N+++  +C +G  +  A+ LL ++  S GC+PDV++YN 
Sbjct: 171 SAVRVLQDLHGRGCALDVGNCNLVLNAVCDQGGSVDEALRLLRDLPTSFGCDPDVVSYNA 230

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           +L+ +    ++ +     ++ +R GCPP ++T+  LI  +C+     R  +VL  M   G
Sbjct: 231 VLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCRNGLFERVHQVLAQMVDHG 290

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           C+PDI  Y ++++  CK+G  + A  +++ + S G++PN + YNT+L  L S   W+  +
Sbjct: 291 CTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKGLCSAERWEQAE 350

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++L  M +        T+NIL++  C+ GLV R I    QM+   C PD++TY TV+   
Sbjct: 351 ELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGF 410

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CKEG+++EA+ LL  +    C P  I+Y  ++ GL        A  L  QM+E G SP+ 
Sbjct: 411 CKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNP 470

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T  T+I   C+   VE+A++LLK++   G      +Y  VI GL K+ K D A+++L +
Sbjct: 471 VTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNV 530

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M++    P+  ++S+I   ++ +G      +++  +
Sbjct: 531 MVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNI 566



 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 130/426 (30%), Positives = 223/426 (52%), Gaps = 2/426 (0%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           LP+S G   + D  + N +L+  C   +      L++ M R    P+      LI  L R
Sbjct: 215 LPTSFG--CDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVTFNTLIGYLCR 272

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
               E+  +VL  MV  G  PD   Y  ++ G+CK G +  A  +LD M   G +P+V+ 
Sbjct: 273 NGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNVVC 332

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YNT+L+ +    +++QA     +     CP   +T+ IL++  C+   + R IE+L+ M 
Sbjct: 333 YNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQML 392

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             GC PD++TY +++N  CK+G  D+AV+++ ++ + G  PN+I+Y  +L  L S   W 
Sbjct: 393 EHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWV 452

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
             + ++  M E   SP   T+N +IN LCK GLV++AI    QM+   C PD+++Y+TV+
Sbjct: 453 DAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVI 512

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             L K G  +EAL+LL+++     SP  I Y+++   L+K+G + + + ++  + +  I 
Sbjct: 513 DGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIR 572

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
            D + +  +I   C+    + A++ L  +   G     S Y ++I GL     V  A ++
Sbjct: 573 SDAVLYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEM 632

Query: 525 LELMIS 530
           L  + S
Sbjct: 633 LTELCS 638



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 201/415 (48%), Gaps = 43/415 (10%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           YN MV G C+ GQ+ SA  L   + V    P+  TY  ++R +   G+   A+    +  
Sbjct: 86  YNAMVSGYCRAGQLASARRLAASVPVP---PNAYTYFPVVRALCARGRIADALSVLDEMR 142

Query: 250 RKGCPPYLITYTILIEQVCKQCG---IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           R+GC P    Y +++E  C + G      A+ VL D+   GC+ D+   N ++N  C QG
Sbjct: 143 RRGCAPIPPMYHVILEAACSRGGGGGFRSAVRVLQDLHGRGCALDVGNCNLVLNAVCDQG 202

Query: 307 -KYDDAVLVINNL-LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
              D+A+ ++ +L  S G +P+ ++YN +L  L     W  V  +++ M      P V T
Sbjct: 203 GSVDEALRLLRDLPTSFGCDPDVVSYNAVLKGLCMAKRWGRVQDLMEEMVRVGCPPNVVT 262

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           +N LI  LC+ GL +R      QMV   C PDI  Y TVL  +CKEG L  A ++L  + 
Sbjct: 263 FNTLIGYLCRNGLFERVHQVLAQMVDHGCTPDIRMYATVLDGVCKEGHLEVAHEILDRMP 322

Query: 425 GSSCSPCLITYNTLIDGL-----------------------------------AKKGCME 449
                P ++ YNT++ GL                                    + G + 
Sbjct: 323 SYGLKPNVVCYNTVLKGLCSAERWEQAEELLAEMFDNDCPLDDVTFNILVDFFCQNGLVY 382

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           + + L  QM+E+G  PD IT+ T+I GFC+   ++EAV LLK +   G +    +Y +V+
Sbjct: 383 RVIELLEQMLEHGCVPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVL 442

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            GLC +++   A  ++  MI     P+   F+T++  +   G+ E+A +L ++++
Sbjct: 443 KGLCSAERWVDAEDLMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQML 497



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/348 (31%), Positives = 184/348 (52%), Gaps = 2/348 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKV 174
           D +    +L   C  G L  A +++D M      P+   C N +++GL   +R E+A ++
Sbjct: 294 DIRMYATVLDGVCKEGHLEVAHEILDRMPSYGLKPNV-VCYNTVLKGLCSAERWEQAEEL 352

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L  M  +    D +T+N++V   C+ G +   I LL++M   GC PDVITY T++     
Sbjct: 353 LAEMFDNDCPLDDVTFNILVDFFCQNGLVYRVIELLEQMLEHGCVPDVITYTTVINGFCK 412

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G   +A+   K     GC P  I+YTI+++ +C       A +++  M  +GCSP+ VT
Sbjct: 413 EGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAEDLMSQMIEQGCSPNPVT 472

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +N+++NF CK+G  + A+ ++  +L  G  P+ I+Y+T++  LG  G  D   ++L++M 
Sbjct: 473 FNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMV 532

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               SP    Y+ + + L K G ++R I  F+ +     + D V YN V+ +LCK G  +
Sbjct: 533 NKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAVLYNAVISSLCKRGGTD 592

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
            A++ L  +  S C P   TY  LI GLA +G +++A  +  ++   G
Sbjct: 593 RAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTELCSKG 640



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 174/363 (47%), Gaps = 15/363 (4%)

Query: 40  QFYSQLRDLGAGRNVSLKCRGLPGNVCIDRVNEVDQD------EWSSESHVLAVNKKLRG 93
           Q  +Q+ D G   ++ +    L G VC +   EV  +       +  + +V+  N  L+G
Sbjct: 281 QVLAQMVDHGCTPDIRMYATVLDG-VCKEGHLEVAHEILDRMPSYGLKPNVVCYNTVLKG 339

Query: 94  LTITKKSHDPS-----LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ 148
           L   ++          +  +D P    D+ T N ++  FC  G +    +L++ M     
Sbjct: 340 LCSAERWEQAEELLAEMFDNDCPL---DDVTFNILVDFFCQNGLVYRVIELLEQMLEHGC 396

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +PD      +I G  +   I++A  +L+ M   G  P+TI+Y +++ GLC   +   A  
Sbjct: 397 VPDVITYTTVINGFCKEGLIDEAVMLLKSMAACGCRPNTISYTIVLKGLCSAERWVDAED 456

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           L+ +M   GC P+ +T+NT++  +   G  +QAI   K  L  GC P LI+Y+ +I+ + 
Sbjct: 457 LMSQMIEQGCSPNPVTFNTVINFLCKKGLVEQAIELLKQMLLNGCSPDLISYSTVIDGLG 516

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K      A+E+L+ M  +G SP+ + Y+S+ +   K+G+ +  + + +N+    +  +++
Sbjct: 517 KAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSKEGRINRVIQMFDNIQDVTIRSDAV 576

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            YN ++ SL  RG  D   + L  M  +   P   TY ILI GL   G V  A     ++
Sbjct: 577 LYNAVISSLCKRGGTDRAIEFLAYMVSSGCMPNESTYTILIRGLASEGFVKEAQEMLTEL 636

Query: 389 VSK 391
            SK
Sbjct: 637 CSK 639


>gi|115470153|ref|NP_001058675.1| Os07g0101200 [Oryza sativa Japonica Group]
 gi|50508922|dbj|BAD31827.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|113610211|dbj|BAF20589.1| Os07g0101200 [Oryza sativa Japonica Group]
          Length = 738

 Score =  245 bits (625), Expect = 5e-62,   Method: Compositional matrix adjust.
 Identities = 137/450 (30%), Positives = 238/450 (52%), Gaps = 1/450 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  ++  C  G+L +A +L+D M R   +PD      LIRGL +    ++A   L+ M
Sbjct: 226 TYNIWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRM 284

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G +PD  TYN ++ G CK   ++ A  LL +    G  PD +TY +++  +   G  
Sbjct: 285 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 344

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+  + +   KG  P ++ Y  L++ +C Q  I  A++V+++MA EGC PDI TYN +
Sbjct: 345 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 404

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G   DA +V+N+ + +G  P+  T+NTL+     R   D+  ++++ M E   
Sbjct: 405 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 464

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   TYN ++NGLCK G V+    +F +M+ K C P+ +TYN ++   C+   + EA +
Sbjct: 465 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 524

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  ++     P  +++NTLI G  + G +E A +L+ ++ E G S    T  TLI  F 
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 584

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
               +  A  +  E+  +G++  +  YR++I G CK+  VD A   L  MI   + P  +
Sbjct: 585 GKLNMHMAEKIFDEMLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMS 644

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            F  ++  +  +    +A  +   +++  V
Sbjct: 645 TFGRVINSLTVNHRVFQAVGIIHIMVKIGV 674



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 227/449 (50%), Gaps = 9/449 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINL-IRGLIRIDRIEKASKVLQIMV 179
           NK+L   C RG + +A  L+  + +R    +  F  N+ IRGL    R+ +A +++  M 
Sbjct: 193 NKVLHALCKRGDVLEAGLLLGKVIQRGMSINL-FTYNIWIRGLCEAGRLPEAVRLVDGM- 250

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            +  VPD +TYN ++ GLCK+   + A+  L  M   GC PD  TYNTI+         +
Sbjct: 251 RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQ 310

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A    KD + KG  P  +TY  LI  +C +  + RA+E+ ++   +G  PDIV YNSLV
Sbjct: 311 EATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLV 370

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA--- 356
              C QG    A+ V+N +   G  P+  TYN +++ L   G    +     +MN+A   
Sbjct: 371 KGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMG---NISDATVVMNDAIMK 427

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            + P VFT+N LI+G CK   +D A+    +M      PD +TYN+VL  LCK G +NE 
Sbjct: 428 GYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEV 487

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +    +    C P  ITYN LI+   +   ME+A  +  +M + G+ PD ++  TLI+G
Sbjct: 488 NETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYG 547

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           FCR   +E A  L +++ ++G       +  +I        + MA ++ + M+S  ++ D
Sbjct: 548 FCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRAD 607

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +  ++         + AY    ++I+
Sbjct: 608 SYTYRVLIDGSCKTANVDRAYMHLVEMIK 636



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/456 (30%), Positives = 237/456 (51%), Gaps = 11/456 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T+   L++FC   +   A +L+  +  R  +    +C  ++ GL        A 
Sbjct: 119 VSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVA---YC-TVVCGLYAHGHTHDAR 174

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M+ +   P+   +N ++  LCKRG +  A  LL ++   G   ++ TYN  +R +
Sbjct: 175 QLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYNIWIRGL 234

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            + G+  +A+    D +R    P ++TY  LI  +CK+     A+  L  M  +GC PD 
Sbjct: 235 CEAGRLPEAVRLV-DGMRAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDD 293

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN++++  CK     +A  ++ + + +G  P+ +TY +L++ L + G    V++ L++
Sbjct: 294 FTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEG---DVERALEL 350

Query: 353 MNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            NEA      P +  YN L+ GLC  GL+  A+   N+M  + C PDI TYN V+  LCK
Sbjct: 351 FNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCK 410

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G +++A  +++        P + T+NTLIDG  K+  ++ A+ L  +M E GI+PD IT
Sbjct: 411 MGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTIT 470

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +++ G C+A +V E  +  +E+  +G       Y ++I   C+S K++ A +V+  M 
Sbjct: 471 YNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMS 530

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                PD   F+T++     +G  E AY L+QKL E
Sbjct: 531 QEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEE 566



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 230/436 (52%), Gaps = 1/436 (0%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           + G   DA +L D M   +  P+      ++  L +   + +A  +L  ++  G   +  
Sbjct: 166 AHGHTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLF 225

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TYN+ + GLC+ G++  A+ L+D M      PDV+TYNT++R +      ++A+ + +  
Sbjct: 226 TYNIWIRGLCEAGRLPEAVRLVDGMRAYAV-PDVVTYNTLIRGLCKKSMPQEAMHYLRRM 284

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           + +GC P   TY  +I+  CK   +  A E+L D   +G  PD VTY SL+N  C +G  
Sbjct: 285 MNQGCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDV 344

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           + A+ + N   ++G++P+ + YN+L+  L  +G      ++++ M E    P + TYNI+
Sbjct: 345 ERALELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIV 404

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           INGLCK G +  A    N  + K   PD+ T+NT++   CK   L+ ALQL+  +     
Sbjct: 405 INGLCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 464

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P  ITYN++++GL K G + +    + +M+  G  P+ IT+  LI  FCR++++EEA  
Sbjct: 465 APDTITYNSVLNGLCKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASK 524

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           ++ ++ + G      ++  +I+G C++  ++ A  + + +    Y      F+T++   +
Sbjct: 525 VIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFS 584

Query: 549 DDGMTEEAYKLWQKLI 564
                  A K++ +++
Sbjct: 585 GKLNMHMAEKIFDEML 600



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/435 (28%), Positives = 222/435 (51%), Gaps = 2/435 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +++  C +    +A   +  M  +  +PD      +I G  +I  +++A+++L
Sbjct: 257 DVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQGCLPDDFTYNTIIDGYCKISMVQEATELL 316

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  V  G VPD +TY  ++ GLC  G +  A+ L +E    G +PD++ YN++++ +   
Sbjct: 317 KDAVFKGFVPDQVTYCSLINGLCAEGDVERALELFNEAQAKGIKPDIVVYNSLVKGLCLQ 376

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A+    +   +GC P + TY I+I  +CK   I+ A  V++D  ++G  PD+ T+
Sbjct: 377 GLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDATVVMNDAIMKGYLPDVFTF 436

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK+ K D A+ ++  +   G+ P++ITYN++L+ L   G  + V++    M  
Sbjct: 437 NTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGLCKAGKVNEVNETFQEMIL 496

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TYNILI   C+   ++ A     +M  +   PD V++NT++   C+ G L  
Sbjct: 497 KGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDAVSFNTLIYGFCRNGDLEG 556

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   L     S    T+NTLI   + K  M  A  ++ +M+  G   D  T+R LI 
Sbjct: 557 AYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDEMLSKGHRADSYTYRVLID 616

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+   V+ A   L E+ K+G     S +  VI+ L  + +V  A+ ++ +M+     P
Sbjct: 617 GSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHRVFQAVGIIHIMVKIGVVP 676

Query: 536 D--DTVFSTIVKKVA 548
           +  DT+ +   K++A
Sbjct: 677 EVVDTILNADKKEIA 691



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 187/376 (49%), Gaps = 17/376 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    N +++  C +G +  A ++++ MA     PD      +I GL ++  I  A+
Sbjct: 359 IKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVINGLCKMGNISDAT 418

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V+   +M G +PD  T+N ++ G CKR ++ SA+ L++ M   G  PD ITYN++L  +
Sbjct: 419 VVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGIAPDTITYNSVLNGL 478

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK  +    +++ + KGC P  ITY ILIE  C+   +  A +V+  M+ EG  PD 
Sbjct: 479 CKAGKVNEVNETFQEMILKGCHPNPITYNILIENFCRSNKMEEASKVIVKMSQEGLHPDA 538

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V++N+L+   C+ G  + A L+   L  +G    + T+NTL+ +   +      +KI D 
Sbjct: 539 VSFNTLIYGFCRNGDLEGAYLLFQKLEEKGYSATADTFNTLIGAFSGKLNMHMAEKIFDE 598

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M    H    +TY +LI+G CK   VDRA     +M+ K   P + T+  V+ +L     
Sbjct: 599 MLSKGHRADSYTYRVLIDGSCKTANVDRAYMHLVEMIKKGFIPSMSTFGRVINSLTVNHR 658

Query: 413 LNEALQLLHLLNGSSCSPCLI------------TYNTLIDGLAKKGCMEKAMVLYGQMME 460
           + +A+ ++H++      P ++                L++ L KKG +        +++ 
Sbjct: 659 VFQAVGIIHIMVKIGVVPEVVDTILNADKKEIAAPKILVEDLMKKGHISYPTY---EVLH 715

Query: 461 NGISPDDIT--HRTLI 474
            G+  + +T  HR L+
Sbjct: 716 EGVRDNKLTRKHRMLL 731



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 189/417 (45%), Gaps = 34/417 (8%)

Query: 185 PDTI--TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
           P TI   Y   +    + G++R A+   + M +  C P    YN I+  + D     QA 
Sbjct: 49  PATIHPLYVASIRAYARAGRLRDAVDAFERMDLFACPPAAPAYNAIMDALVDAAYHDQAH 108

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQ-------------------------CGIAR-- 275
             +   L  G  P L T+TI +   C                           CG+    
Sbjct: 109 KVYVRMLAAGVSPDLHTHTIRLRSFCLTARPHIALRLLRALPHRGAVAYCTVVCGLYAHG 168

Query: 276 ----AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
               A ++ D M      P++  +N +++  CK+G   +A L++  ++ RGM  N  TYN
Sbjct: 169 HTHDARQLFDQMLHTHVFPNLAAFNKVLHALCKRGDVLEAGLLLGKVIQRGMSINLFTYN 228

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
             +  L   G      +++D M  A   P V TYN LI GLCK  +   A++   +M+++
Sbjct: 229 IWIRGLCEAGRLPEAVRLVDGM-RAYAVPDVVTYNTLIRGLCKKSMPQEAMHYLRRMMNQ 287

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
            C PD  TYNT++   CK  M+ EA +LL         P  +TY +LI+GL  +G +E+A
Sbjct: 288 GCLPDDFTYNTIIDGYCKISMVQEATELLKDAVFKGFVPDQVTYCSLINGLCAEGDVERA 347

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           + L+ +    GI PD + + +L+ G C    +  A+ ++ E+ + G       Y +VI+G
Sbjct: 348 LELFNEAQAKGIKPDIVVYNSLVKGLCLQGLILHALQVMNEMAEEGCHPDIQTYNIVING 407

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           LCK   +  A  V+   I   Y PD   F+T++         + A +L +++ E+ +
Sbjct: 408 LCKMGNISDATVVMNDAIMKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWEYGI 464


>gi|302806549|ref|XP_002985024.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
 gi|300147234|gb|EFJ13899.1| hypothetical protein SELMODRAFT_121499 [Selaginella moellendorffii]
          Length = 570

 Score =  244 bits (624), Expect = 7e-62,   Method: Compositional matrix adjust.
 Identities = 132/427 (30%), Positives = 225/427 (52%), Gaps = 2/427 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           KT+N +L   C  GK+  A    +         D H    ++  L +  +I+ A  +++ 
Sbjct: 131 KTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDAVALMEK 190

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +  +G  P   TYN ++ GLCK G++  AI LL ++  +GC PDV+TY +++  +    +
Sbjct: 191 ITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKR 250

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A   +K+   +G     + YT LI  + +   I +A  V   M  +GC PD+VT ++
Sbjct: 251 SFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLST 310

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  CK G+   AV +  ++ +RG+ PN + Y+ L+H L      D   ++L  M +A 
Sbjct: 311 MIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAF 370

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +P   TYNILI+GLCK G V+ A   F++M+   C+PD+ TYN ++   CK G  + A 
Sbjct: 371 CTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAAC 430

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +   ++ S CSP ++TY TLI GL K+  + KA + +  M E G  PD   + +L+ G 
Sbjct: 431 GVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDGL 490

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C++ ++E    L  E+ + G     +  RL+ H LCK+ +VD A+ +    I     P  
Sbjct: 491 CKSGKLEGGCMLFDEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLFN-AIRKEGMPHP 548

Query: 538 TVFSTIV 544
             +++I+
Sbjct: 549 YAYNSII 555



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 131/404 (32%), Positives = 208/404 (51%), Gaps = 2/404 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+       K+ DA  L++ +      P       L+ GL ++ R+E+A  +L
Sbjct: 164 DIHTYTAIVDWLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 223

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + +V +G  PD +TY  ++ GL K  +   A  L  EM++ G   D + Y  ++R +   
Sbjct: 224 RKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQA 283

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  QA   +K    +GC P ++T + +I+ +CK   I  A+ +   M   G +P+ V Y
Sbjct: 284 GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVY 343

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  CK  K D A+ ++  +      P++ITYN L+  L   G  +A     D M E
Sbjct: 344 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLE 403

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A   P V+TYNIL++G CK G  D A   F+ M S +C P++VTY T++  LCK   L +
Sbjct: 404 AGCKPDVYTYNILVSGFCKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTK 463

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A      +    C P    Y++L+DGL K G +E   +L+ +M  +G++ +  T   LI+
Sbjct: 464 ASLYFQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIF 522

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
             C+A++V+EAV L   I K G      AY  +I  L KS KV+
Sbjct: 523 HLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISTLIKSAKVN 565



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 216/446 (48%), Gaps = 1/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L  F    +  +A  L+        +PD      LI G       E+A  V++ M
Sbjct: 61  TGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREM 120

Query: 179 VMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
               GV P   T+N+++ GLCK G++ +A+   +  + +GC  D+ TY  I+  +  N K
Sbjct: 121 EEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKK 180

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            + A+   +     GC P + TY  L+  +CK   +  AI++L  +   GC+PD+VTY S
Sbjct: 181 IQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTS 240

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++   K+ +  +A  +   +  RG+  +++ Y  L+  L   G       +   M    
Sbjct: 241 LIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQG 300

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V T + +I+GLCK G +  A+  F  M ++   P+ V Y+ ++  LCK   ++ AL
Sbjct: 301 CVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 360

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++L  +  + C+P  ITYN LIDGL K G +E A   + +M+E G  PD  T+  L+ GF
Sbjct: 361 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGF 420

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+A   + A  +  ++           Y  +I GLCK +++  A    + M      PD 
Sbjct: 421 CKAGNTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDS 480

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
            V+S++V  +   G  E    L+ ++
Sbjct: 481 FVYSSLVDGLCKSGKLEGGCMLFDEM 506



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 202/409 (49%), Gaps = 1/409 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS- 216
           L+    R  R  +A  +L+  + +  +PD  T+N+++ G C   +   A A++ EM    
Sbjct: 65  LLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEAFAVIREMEEDY 124

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P + T+N +L  +  +GK   A+  ++     GC   + TYT +++ + K   I  A
Sbjct: 125 GVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVDWLAKNKKIQDA 184

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + +++ +   GC+P I TYN+L+N  CK G+ ++A+ ++  ++  G  P+ +TY +L+  
Sbjct: 185 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 244

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           LG         K+   M           Y  LI GL + G + +A + +  M S+ C PD
Sbjct: 245 LGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPD 304

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +VT +T++  LCK G +  A+++   +     +P  + Y+ LI GL K   M+ A+ +  
Sbjct: 305 VVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 364

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           QM +   +PD IT+  LI G C++  VE A     E+ + G K     Y +++ G CK+ 
Sbjct: 365 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAG 424

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             D A  V + M SS   P+   + T++  +       +A   +Q + E
Sbjct: 425 NTDAACGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKE 473



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 77/278 (27%), Positives = 147/278 (52%), Gaps = 1/278 (0%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG-SRGCWDA 345
           G    + T N+L++   +  ++ +A  ++ N L+    P+  T+N L+     +R   +A
Sbjct: 54  GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATTFLPDVETWNVLITGYCLAREPEEA 113

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              I ++  +   +P++ T+N++++GLCK G V  A++ F    +  C  DI TY  ++ 
Sbjct: 114 FAVIREMEEDYGVAPSLKTHNLVLHGLCKSGKVLAAMDHFETTTTNGCTIDIHTYTAIVD 173

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            L K   + +A+ L+  +  + C+P + TYN L++GL K G +E+A+ L  ++++NG +P
Sbjct: 174 WLAKNKKIQDAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 233

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +T+ +LI G  +  +  EA  L KE+  RG  +    Y  +I GL ++ K+  A  V 
Sbjct: 234 DVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLVLDTVCYTALIRGLLQAGKIPQASSVY 293

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + M S    PD    ST++  +   G    A ++++ +
Sbjct: 294 KTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSM 331



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/196 (26%), Positives = 82/196 (41%), Gaps = 2/196 (1%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F   D  T N ++   C  G +  A    D M      PD +    L+ G  +    + A
Sbjct: 370 FCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILVSGFCKAGNTDAA 429

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             V   M  S   P+ +TY  ++ GLCKR Q+  A      M   GC PD   Y++++  
Sbjct: 430 CGVFDDMSSSHCSPNVVTYGTLISGLCKRRQLTKASLYFQHMKERGCPPDSFVYSSLVDG 489

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  +GK +     + +  R G      T T LI  +CK   +  A+ + + +  EG  P 
Sbjct: 490 LCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPH 547

Query: 292 IVTYNSLVNFSCKQGK 307
              YNS+++   K  K
Sbjct: 548 PYAYNSIISTLIKSAK 563


>gi|224130706|ref|XP_002328356.1| predicted protein [Populus trichocarpa]
 gi|222838071|gb|EEE76436.1| predicted protein [Populus trichocarpa]
          Length = 613

 Score =  244 bits (624), Expect = 8e-62,   Method: Compositional matrix adjust.
 Identities = 144/495 (29%), Positives = 259/495 (52%), Gaps = 31/495 (6%)

Query: 95  TITKKSHDPSLPSSDGPFVENDEKTNN----KILQNFC------SRGKLTDASKLIDIMA 144
           T TKK   PSLP ++  FV N+  +NN      L +F        R  + +  K +   A
Sbjct: 50  TSTKK---PSLPKNNDGFVSNN--SNNVCVDDALASFYRMVRINPRPSVVEFGKFLGSFA 104

Query: 145 RR----------NQIPDFHFCIN------LIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           ++          NQ+  F    N      LI  L R++ ++ +  VL  M   G  PD I
Sbjct: 105 KKKQYSTVVSLCNQMDLFRVTHNVYSLNILINCLCRLNHVDFSVSVLGKMFKLGIHPDAI 164

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T+N ++ GLC  G+I+ A+ L +EM   G EP+VI+Y T++  +   G    A+  +K  
Sbjct: 165 TFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAVDVFKKM 224

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
            + GC P ++TY+ +I+ +CK   +  A+E L +M   G  P++ TYNS+V+  C  G+ 
Sbjct: 225 EQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGFCNLGQL 284

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           ++A  +   ++ R + PN++T+  L+  L   G       + + M E    P + TYN L
Sbjct: 285 NEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDISTYNAL 344

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           ++G C   L++ A   F  M+ K C P   +YN ++   CK   ++EA  LL  +   + 
Sbjct: 345 MDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAEMYHKAL 404

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P  +TY+TL+ GL + G  ++A+ L+ +M   G  P+ +T+  L+ GFC+   ++EA+ 
Sbjct: 405 NPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGHLDEALK 464

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           LLK + ++  +     Y ++I G+  + K+++A ++   +     +PD   ++ ++K + 
Sbjct: 465 LLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTVMIKGLL 524

Query: 549 DDGMTEEAYKLWQKL 563
            +G+++EAY L++K+
Sbjct: 525 KEGLSDEAYDLFRKM 539



 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 124/438 (28%), Positives = 225/438 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N ++   C+ GK+ +A +L + M +R   P+      +I GL +      A 
Sbjct: 159 IHPDAITFNALINGLCNEGKIKEAVELFNEMVKRGHEPNVISYTTVINGLCKTGNTSMAV 218

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V + M  +G  P+ +TY+ ++  LCK   +  A+  L EM   G  P+V TYN+I+   
Sbjct: 219 DVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAMEFLSEMVERGIPPNVFTYNSIVHGF 278

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            + G+  +A   +K+ + +   P  +T+TIL++ +CK+  ++ A  V + M  +G  PDI
Sbjct: 279 CNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGLCKEGMVSEARLVFETMTEKGVEPDI 338

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN+L++  C Q   ++A  V   ++ +G  P + +YN L++        D    +L  
Sbjct: 339 STYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGAHSYNILINGYCKSRRMDEAKSLLAE 398

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M   + +P   TY+ L+ GLC+ G    A+N F +M S    P++VTY  +L   CK G 
Sbjct: 399 MYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKEMCSYGPHPNLVTYVILLDGFCKHGH 458

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EAL+LL  +      P ++ Y  LI+G+   G +E A  L+ ++  +G  PD  T+  
Sbjct: 459 LDEALKLLKSMKEKKLEPNIVHYTILIEGMFIAGKLEVAKELFSKLFGDGTRPDIRTYTV 518

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G  +    +EA DL +++   G    + +Y ++I G  +++    AI++++ M+  R
Sbjct: 519 MIKGLLKEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKR 578

Query: 533 YKPDDTVFSTIVKKVADD 550
           +  + + F  ++   + D
Sbjct: 579 FSVNLSTFQMLLDLESQD 596



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 101/364 (27%), Positives = 184/364 (50%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +  A+A    M      P V+ +   L +     ++   +              + +  I
Sbjct: 74  VDDALASFYRMVRINPRPSVVEFGKFLGSFAKKKQYSTVVSLCNQMDLFRVTHNVYSLNI 133

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI  +C+   +  ++ VL  M   G  PD +T+N+L+N  C +GK  +AV + N ++ RG
Sbjct: 134 LINCLCRLNHVDFSVSVLGKMFKLGIHPDAITFNALINGLCNEGKIKEAVELFNEMVKRG 193

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            EPN I+Y T+++ L   G       +   M +    P V TY+ +I+ LCK  LV+ A+
Sbjct: 194 HEPNVISYTTVINGLCKTGNTSMAVDVFKKMEQNGCKPNVVTYSTIIDSLCKDRLVNDAM 253

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
              ++MV +   P++ TYN+++   C  G LNEA +L   + G    P  +T+  L+DGL
Sbjct: 254 EFLSEMVERGIPPNVFTYNSIVHGFCNLGQLNEATRLFKEMVGRDVMPNTVTFTILVDGL 313

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+G + +A +++  M E G+ PD  T+  L+ G+C    + EA  + + + ++G     
Sbjct: 314 CKEGMVSEARLVFETMTEKGVEPDISTYNALMDGYCLQRLMNEAKKVFEIMIRKGCAPGA 373

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            +Y ++I+G CKS+++D A  +L  M      PD   +ST+++ +   G  +EA  L+++
Sbjct: 374 HSYNILINGYCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQLGRPKEALNLFKE 433

Query: 563 LIEW 566
           +  +
Sbjct: 434 MCSY 437


>gi|225451354|ref|XP_002275019.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 744

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 134/446 (30%), Positives = 231/446 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++ +FC   ++  A  ++  + +    PD      LIRGL    +I +A  +   M
Sbjct: 93  TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 152

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+ +TY  ++ GLCK G   +AI LL  M    C+PDV+ Y +I+ ++  + + 
Sbjct: 153 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 212

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +   + +G  P + TYT L+  +C  C       +L+ M      PD+V ++++
Sbjct: 213 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 272

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  CK+GK  +A  +++ ++ RG+EP+ +TY TL+     +   D   K+ D+M     
Sbjct: 273 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGF 332

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V +Y  LING CK   +D+A+  F +M  K   PD  TYNT++  LC  G L +A+ 
Sbjct: 333 APDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIA 392

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L H +      P L+TY+ L+D L K   +E+AM L   +  + ++PD   +  +I G C
Sbjct: 393 LFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMC 452

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           RA ++E A DL   +  +G       Y ++IHGLCK   ++ A ++   M  +   PD  
Sbjct: 453 RAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGC 512

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++TI +    +  T  A +L ++++
Sbjct: 513 TYNTIARGFLQNNETLRAIQLLEEML 538



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 226/431 (52%), Gaps = 6/431 (1%)

Query: 139 LIDIMARRNQIPDFH---FCINLIRGLIRIDRIEKASKVLQIMVM--SGGVPDTI-TYNM 192
           L D ++  N++   H     ++  + L  I +++  S VL +     S GVP  + T N+
Sbjct: 37  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 96

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++   C   ++  A ++L ++   G +PD  T+ T++R +   GK  +A+  +   + +G
Sbjct: 97  LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 156

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P ++TY  LI  +CK    + AI +L  M    C PD+V Y S+++  CK  +  +A 
Sbjct: 157 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 216

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            + + ++ +G+ P+  TY +L+H+L +   W  V  +L+ M  +   P V  ++ +++ L
Sbjct: 217 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 276

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G V  A    + M+ +  +PD+VTY T++   C +  ++EA+++  ++     +P +
Sbjct: 277 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 336

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           I+Y TLI+G  K   ++KAM L+ +M      PD  T+ TL+ G C   ++++A+ L  E
Sbjct: 337 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHE 396

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +  RG       Y +++  LCK+  ++ A+ +L+ + +S   PD  V++ I+  +   G 
Sbjct: 397 MVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 456

Query: 553 TEEAYKLWQKL 563
            E A  L+  L
Sbjct: 457 LEAARDLFSNL 467



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/394 (29%), Positives = 197/394 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G  + A +L+  M + N  PD     ++I  L +  ++ +A  +   M
Sbjct: 163 TYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQM 222

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD  TY  +V  LC   + +    LL++M  S   PDV+ ++T++  +   GK 
Sbjct: 223 VGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKV 282

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A       +++G  P ++TYT L++  C Q  +  A++V D M  +G +PD+++Y +L
Sbjct: 283 TEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTL 342

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK  K D A+ +   +  +   P++ TYNTL+H L   G       +   M     
Sbjct: 343 INGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMVARGQ 402

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TY+IL++ LCK   ++ A+     + + N  PDI  YN ++  +C+ G L  A  
Sbjct: 403 MPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARD 462

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   L+     P + TYN +I GL K+G + +A  L+ +M  N  SPD  T+ T+  GF 
Sbjct: 463 LFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFL 522

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           + ++   A+ LL+E+  RG     S   L++  L
Sbjct: 523 QNNETLRAIQLLEEMLARGFSADVSTTTLLVEML 556



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 174/345 (50%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P ++ +  +L ++     +   +         G PP + T  ILI   C    +  A  V
Sbjct: 54  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 113

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L  +   G  PD  T+ +L+   C +GK  +A+ + + ++  G +PN +TY TL++ L  
Sbjct: 114 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 173

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G   A  ++L  M + +  P V  Y  +I+ LCK   V  A N F+QMV +   PDI T
Sbjct: 174 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 233

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y +++ ALC          LL+ +  S   P ++ ++T++D L K+G + +A  +   M+
Sbjct: 234 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 293

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           + G+ PD +T+ TL+ G C   +++EAV +   + ++G      +Y  +I+G CK  K+D
Sbjct: 294 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 353

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            A+ + E M    + PD   ++T++  +   G  ++A  L+ +++
Sbjct: 354 KAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQDAIALFHEMV 398



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 183/387 (47%), Gaps = 49/387 (12%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++   C  GK+T+A +++D+M +R   PD      L+ G      +++A KV  +MV 
Sbjct: 270 STVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVR 329

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD I+Y  ++ G CK  +I  A+ L +EM      PD  TYNT++  +   G+ + 
Sbjct: 330 KGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMHGLCHVGRLQD 389

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI  + + + +G  P L+TY+IL++ +CK C +  A+ +L  +     +PDI  YN +++
Sbjct: 390 AIALFHEMVARGQMPDLVTYSILLDSLCKNCHLEEAMALLKAIEASNLNPDIQVYNIIID 449

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ G+ + A  + +NL S+G+ P                                   
Sbjct: 450 GMCRAGELEAARDLFSNLSSKGLHP----------------------------------- 474

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +V+TYNI+I+GLCK GL++ A   F +M   +C PD  TYNT+     +      A+QLL
Sbjct: 475 SVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLL 534

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI------ 474
             +     S  + T   L++ L+  G  + +  L    M + +S DD  +   I      
Sbjct: 535 EEMLARGFSADVSTTTLLVEMLSDDGLDQSSCFL----MLSVLSEDDRRYFIFIPEGFDL 590

Query: 475 --WGFCRADQVEEAVDLLKEIGKRGNK 499
             W F R    E A   + E+ K G K
Sbjct: 591 LGWEFMRCKLKELAK--IGEVSKSGTK 615



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 79/269 (29%), Positives = 128/269 (47%), Gaps = 3/269 (1%)

Query: 300 NFSCKQGKY---DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           NF  K   +   DDA+   N LL     P+ + +  LL S+     +  V  +   M+  
Sbjct: 26  NFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSF 85

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P V+T NILIN  C    V  A +   +++    QPD  T+ T++  LC EG + EA
Sbjct: 86  GVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEA 145

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           L L   +      P ++TY TLI+GL K G    A+ L   M +    PD + + ++I  
Sbjct: 146 LHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDS 205

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C+  QV EA +L  ++  +G       Y  ++H LC   +      +L  M++S+  PD
Sbjct: 206 LCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPD 265

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +FST+V  +  +G   EA+++   +I+
Sbjct: 266 VVIFSTVVDALCKEGKVTEAHEIVDMMIQ 294


>gi|357477565|ref|XP_003609068.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
 gi|355510123|gb|AES91265.1| hypothetical protein MTR_4g108600 [Medicago truncatula]
          Length = 932

 Score =  244 bits (623), Expect = 9e-62,   Method: Compositional matrix adjust.
 Identities = 153/490 (31%), Positives = 246/490 (50%), Gaps = 39/490 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  +Q  C  G L  A +L+  ++R    PD      +I GL R  R+ +A + L  M
Sbjct: 332 TFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKM 391

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+  TYN ++ G CK+G +  A  +L +    G +PD  TY +++     +G  
Sbjct: 392 VNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDP 451

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA+  +KD L KG  P +I Y  LI+ +C+Q  I  A++++++MA +GC PDI TYN +
Sbjct: 452 DQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLI 511

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G   DA  +I + +++G  P+  TYNTL+     +   D+  ++++ M     
Sbjct: 512 INGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGM 571

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V TYN L+NGLCK    +  +  F  M  K C P+I+TYNT++ +LC    +NEA+ 
Sbjct: 572 TPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVD 631

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKG----------CMEK------------------ 450
           LL  +     +P ++++ TLI G  K G           MEK                  
Sbjct: 632 LLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAF 691

Query: 451 --------AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
                   A+ L+ +M +NG  PD+ T+R LI GFC+   V +    L E  ++G     
Sbjct: 692 SEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSL 751

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK-LWQ 561
           + +  V++ LC   KV  A+ ++ LM+     PD    +TI +      +T  AY+ L+ 
Sbjct: 752 TTFGRVLNCLCVEHKVQEAVGIIHLMVQKDIVPDTV--NTIFEADKKGHITYHAYEFLYD 809

Query: 562 KLIEWKVFEK 571
            + + K+ +K
Sbjct: 810 GVRDKKILKK 819



 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 135/462 (29%), Positives = 235/462 (50%), Gaps = 3/462 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKV 174
           D  T NK++   C +G + ++ +L D + +R   P+ F F I  I+GL +   +++A ++
Sbjct: 294 DVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNI-FIQGLCKEGSLDRAVRL 352

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L  +   G  PD +TYN ++ GLC++ ++  A   L +M   G EP+  TYN+I+     
Sbjct: 353 LGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCK 412

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G    A    KD + KG  P   TY  L+   C+     +A+ V  D   +G  P I+ 
Sbjct: 413 KGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIV 472

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+   C+QG    A+ ++N +  +G +P+  TYN +++ L   GC    + ++    
Sbjct: 473 YNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAI 532

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P +FTYN L++G C+   +D AI   N+M S+   PD++TYNT+L  LCK     
Sbjct: 533 TKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSE 592

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           E +++   +    C+P +ITYNT+I+ L     + +A+ L G+M   G++PD ++  TLI
Sbjct: 593 EVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAVDLLGEMKSKGLTPDVVSFGTLI 652

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRY 533
            GFC+   ++ A  L + + K+ +    +A Y ++I    +   + MA+++   M  +  
Sbjct: 653 TGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIISAFSEQLNMKMALRLFSEMKKNGC 712

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            PD+  +  ++      G   + YK   + IE       TT 
Sbjct: 713 DPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIPSLTTF 754



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 130/406 (32%), Positives = 212/406 (52%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   G    A +L D M      PD      L+  L +   + ++ ++   ++  G
Sbjct: 266 VVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRG 325

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  T+N+ + GLCK G +  A+ LL  +S  G  PDV+TYNT++  +    +  +A 
Sbjct: 326 VCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAE 385

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 +  G  P   TY  +I+  CK+  +  A  +L D   +G  PD  TY SLVN  
Sbjct: 386 ECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGF 445

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G  D A+ V  + L +G+ P+ I YNTL+  L  +G      ++++ M E    P +
Sbjct: 446 CQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDI 505

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TYN++INGLCK G +  A +     ++K C PDI TYNT++   C++  L+ A++L++ 
Sbjct: 506 WTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNR 565

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P +ITYNTL++GL K    E+ M ++  M E G +P+ IT+ T+I   C + +
Sbjct: 566 MWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKK 625

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           V EAVDLL E+  +G      ++  +I G CK   +D A  +   M
Sbjct: 626 VNEAVDLLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGM 671



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 225/443 (50%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+      G    A K+   M  +    D +     I+   R  R   A ++L+ M +
Sbjct: 194 NAIMNILVEFGYFNQAHKVYMRMKDKKVESDVYTYTIRIKSFCRTGRPYAALRLLRNMPV 253

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   + + Y  +V G  + G    A  L DEM      PDV T+N ++  +   G   +
Sbjct: 254 LGCFSNAVAYCTVVTGFYEFGDNDRARELFDEMLECCLCPDVTTFNKLVHALCKKGFVLE 313

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           +   +   L++G  P L T+ I I+ +CK+  + RA+ +L  ++ EG  PD+VTYN+++ 
Sbjct: 314 SERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSLDRAVRLLGCVSREGLRPDVVTYNTVIC 373

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C++ +  +A   ++ +++ G EPN  TYN+++     +G     ++IL         P
Sbjct: 374 GLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSIIDGYCKKGMVVDANRILKDAVFKGFKP 433

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             FTY  L+NG C+ G  D+A+  F   + K  +P I+ YNT++  LC++G++  ALQL+
Sbjct: 434 DEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLM 493

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           + +    C P + TYN +I+GL K GC+  A  L G  +  G  PD  T+ TL+ G+CR 
Sbjct: 494 NEMAEKGCKPDIWTYNLIINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQ 553

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +++ A++L+  +  +G       Y  +++GLCK+ K +  +++ + M      P+   +
Sbjct: 554 LKLDSAIELVNRMWSQGMTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITY 613

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           +TI++ + +     EA  L  ++
Sbjct: 614 NTIIESLCNSKKVNEAVDLLGEM 636



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 202/385 (52%), Gaps = 6/385 (1%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDR 167
           +G F  ND  T N I+  +C +G + DA++++     +   PD F +C +L+ G  +   
Sbjct: 393 NGGFEPNDF-TYNSIIDGYCKKGMVVDANRILKDAVFKGFKPDEFTYC-SLVNGFCQDGD 450

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
            ++A  V +  +  G  P  I YN ++ GLC++G I  A+ L++EM+  GC+PD+ TYN 
Sbjct: 451 PDQAMAVFKDGLGKGLRPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNL 510

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           I+  +   G    A     D + KGC P + TY  L++  C+Q  +  AIE+++ M  +G
Sbjct: 511 IINGLCKMGCLSDANHLIGDAITKGCIPDIFTYNTLVDGYCRQLKLDSAIELVNRMWSQG 570

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAV 346
            +PD++TYN+L+N  CK  K ++ + +   +  +G  PN ITYNT++ SL  S+   +AV
Sbjct: 571 MTPDVITYNTLLNGLCKTAKSEEVMEIFKAMTEKGCAPNIITYNTIIESLCNSKKVNEAV 630

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLG 405
           D +L  M     +P V ++  LI G CK G +D A   F  M  + +      TYN ++ 
Sbjct: 631 D-LLGEMKSKGLTPDVVSFGTLITGFCKVGDLDGAYGLFRGMEKQYDVSHTTATYNIIIS 689

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           A  ++  +  AL+L   +  + C P   TY  LIDG  K G + +      + +E G  P
Sbjct: 690 AFSEQLNMKMALRLFSEMKKNGCDPDNYTYRVLIDGFCKTGNVNQGYKFLLENIEKGFIP 749

Query: 466 DDITHRTLIWGFCRADQVEEAVDLL 490
              T   ++   C   +V+EAV ++
Sbjct: 750 SLTTFGRVLNCLCVEHKVQEAVGII 774



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 186/361 (51%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           ++G+I+ A+   + M +  C+P V +YN I+  + + G F QA   +     K     + 
Sbjct: 167 RKGKIQEAVDTFERMDLFNCDPSVYSYNAIMNILVEFGYFNQAHKVYMRMKDKKVESDVY 226

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TYTI I+  C+      A+ +L +M + GC  + V Y ++V    + G  D A  + + +
Sbjct: 227 TYTIRIKSFCRTGRPYAALRLLRNMPVLGCFSNAVAYCTVVTGFYEFGDNDRARELFDEM 286

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L   + P+  T+N L+H+L  +G     +++ D + +    P +FT+NI I GLCK G +
Sbjct: 287 LECCLCPDVTTFNKLVHALCKKGFVLESERLFDKVLKRGVCPNLFTFNIFIQGLCKEGSL 346

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           DRA+     +  +  +PD+VTYNTV+  LC++  + EA + LH +      P   TYN++
Sbjct: 347 DRAVRLLGCVSREGLRPDVVTYNTVICGLCRKSRVVEAEECLHKMVNGGFEPNDFTYNSI 406

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           IDG  KKG +  A  +    +  G  PD+ T+ +L+ GFC+    ++A+ + K+   +G 
Sbjct: 407 IDGYCKKGMVVDANRILKDAVFKGFKPDEFTYCSLVNGFCQDGDPDQAMAVFKDGLGKGL 466

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +     Y  +I GLC+   +  A+Q++  M     KPD   ++ I+  +   G   +A  
Sbjct: 467 RPSIIVYNTLIKGLCQQGLILPALQLMNEMAEKGCKPDIWTYNLIINGLCKMGCLSDANH 526

Query: 559 L 559
           L
Sbjct: 527 L 527


>gi|125590530|gb|EAZ30880.1| hypothetical protein OsJ_14954 [Oryza sativa Japonica Group]
          Length = 442

 Score =  244 bits (623), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 131/419 (31%), Positives = 227/419 (54%), Gaps = 34/419 (8%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+  TYN ++  LC+RGQ+R A+++LD+M   GC PDV+TYN +L        ++QA+  
Sbjct: 5   PNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAMEL 64

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
                 +GC P  +TY +L++ +C +  +  A+E+L ++   GC P  V YN+++   C 
Sbjct: 65  IDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGLCS 124

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             ++ DA  ++  +L     PN  T+N +++SL  +G      ++L+ M++   +  + T
Sbjct: 125 AERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANIVT 184

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN +INGLC+   VD A+   ++M S  C+PDIVTYNT+L  LC      +A +L+  + 
Sbjct: 185 YNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDNMT 244

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
            + C P  +T+NTLI  L +KG M  A+ ++ QM + G +P+ IT+ T+I G  +A +++
Sbjct: 245 QNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATKLD 304

Query: 485 EAVDLLKEIGKRG---------------------------NKMRNSA-------YRLVIH 510
           +A++L  E+G +G                            K+++S        Y  ++ 
Sbjct: 305 QALELFNEMGHKGFNPDKIYQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNAILL 364

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           GLC++ K + AI ++  M+SS   PDD  +  +++ +A +G   EA +L  KL    V 
Sbjct: 365 GLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELLIKLCSRDVL 423



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 237/436 (54%), Gaps = 6/436 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T N ++   C RG++ DA  ++D M  R   PD      L+    +     +A 
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +++ +M   G  P+ +TYN+++ G+C  G +  A+ LL  +   GC+P  + YNT+L+ +
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               ++  A     + LR+ CPP   T+ ++I  +C++  + +AI++L+ M+  GC+ +I
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+++N  C+Q   D A+ +++ + S G +P+ +TYNTLL  L S   W   ++++D 
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +    P   T+N LI  LC+ GL+  AI  F QM  K C P+ +TY+T++  L K   
Sbjct: 243 MTQNGCLPDNVTFNTLIGFLCQKGLMVDAIEVFKQMPDKGCTPNSITYSTIISGLAKATK 302

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L++AL+L + +     +P  I Y  L + L     +E+A+    ++ ++GISP  + +  
Sbjct: 303 LDQALELFNEMGHKGFNPDKI-YQLLAECLNDDDTIEEAIQTVRKLQDSGISPHTVLYNA 361

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++ G CR  + E A+D++  +   G    +  Y ++I GL     ++ A ++L + + SR
Sbjct: 362 ILLGLCRNGKTEFAIDIMAYMVSSGCMPDDLTYVILIEGLAYEGYLNEARELL-IKLCSR 420

Query: 533 YKPDDTVFSTIVKKVA 548
               D + ++++K  A
Sbjct: 421 ----DVLVNSLIKSEA 432



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 76/243 (31%), Positives = 128/243 (52%)

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           ++PN+ TYN L+H+L  RG       +LD M     +P V TYNIL+   CK     +A+
Sbjct: 3   VQPNAYTYNPLIHTLCERGQVRDALSVLDDMLCRGCAPDVVTYNILLEATCKGRGYRQAM 62

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
              + M ++ C P+ VTYN ++  +C EG +++AL+LL  L    C P  + YNT++ GL
Sbjct: 63  ELIDLMRAEGCTPNNVTYNVLMDGMCGEGDVDDALELLRNLPSHGCKPSTVNYNTVLKGL 122

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
                   A  L  +M+     P++ T   +I+  CR   +++A+ LL+++ K G     
Sbjct: 123 CSAERWGDADELVTEMLRENCPPNEATFNVVIYSLCRKGLLQQAIQLLEKMSKHGCTANI 182

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +I+GLC+ + VD A+ +L  M S   KPD   ++T++K +       +A +L   
Sbjct: 183 VTYNAIINGLCEQRNVDGAMGLLSKMKSYGCKPDIVTYNTLLKGLCSAARWVDAEELMDN 242

Query: 563 LIE 565
           + +
Sbjct: 243 MTQ 245


>gi|225462201|ref|XP_002269984.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic [Vitis vinifera]
 gi|147852271|emb|CAN82234.1| hypothetical protein VITISV_038804 [Vitis vinifera]
          Length = 567

 Score =  243 bits (621), Expect = 1e-61,   Method: Compositional matrix adjust.
 Identities = 148/522 (28%), Positives = 259/522 (49%), Gaps = 53/522 (10%)

Query: 83  HVLAVNKKLR------GLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDA 136
           H L++NK          +TI+ K +  +LP+      +ND +T +          +L DA
Sbjct: 33  HTLSLNKGFSRVLASTQITISPKDNVFTLPNWRSG--KNDPRTRDL---------RLNDA 81

Query: 137 SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGG 196
              ++ M  +   PD      L+  L + +++ KA+KV+++M+ SG  PD  +   +V  
Sbjct: 82  FLYLEYMIGKGHKPDGGQATQLMYELCKSNKMRKATKVMELMIGSGTTPDPASCTFLVNN 141

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           LCKRG +  A+ L+++M   G   + +TYN+++R +  +G   Q++      ++KG  P 
Sbjct: 142 LCKRGNVGYAMQLVEKMEEYGYPTNTVTYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPN 201

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           + TY+ L+E   K+ G   AI +LD++  +G  P++V+YN L+   CK+G+ ++A+    
Sbjct: 202 VFTYSFLLEAAYKERGADEAIRLLDEIVAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFR 261

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL---- 372
           +L S+G  PN ++YN LL SL   G W+   ++L  M+    SP++ T+NILI  L    
Sbjct: 262 DLPSKGFSPNVVSYNILLRSLCYEGRWEKAKELLAEMDGGERSPSIVTFNILIGSLALHG 321

Query: 373 -------------------------------CKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
                                          CK G VD  +   +QM+ + C P+  TYN
Sbjct: 322 QTDQALEVLDDMSRARFKATAASYNPIIARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYN 381

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            +   LC+EG + EA  ++  L     S     Y  +I  L +KG    A  L  +M + 
Sbjct: 382 AI-AVLCEEGKVQEAFSIIQSLGNKQNSSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKY 440

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G  PD  T+ +LI G C    ++EA+++   + +   +     +  +I GLCK +K D++
Sbjct: 441 GFVPDSYTYSSLIRGLCSEGMLDEAMEIFSIMEENYCRPDVDNFNALILGLCKCRKTDLS 500

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + V E+M+   Y P++T ++ IV+ +A     E A  + ++L
Sbjct: 501 LMVFEMMVKKGYMPNETTYTIIVEGIAHQEEMELAAAVLKEL 542



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 201/392 (51%), Gaps = 1/392 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C  G L+ + +++D   ++  +P+      L+    +    ++A ++L  +
Sbjct: 169 TYNSLVRGLCMHGNLSQSLQILDKFMKKGLVPNVFTYSFLLEAAYKERGADEAIRLLDEI 228

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  GG P+ ++YN+++ GLCK G+   A+    ++   G  P+V++YN +LR++   G++
Sbjct: 229 VAKGGKPNLVSYNVLLTGLCKEGRTEEAMQFFRDLPSKGFSPNVVSYNILLRSLCYEGRW 288

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     +       P ++T+ ILI  +       +A+EVLDDM+         +YN +
Sbjct: 289 EKAKELLAEMDGGERSPSIVTFNILIGSLALHGQTDQALEVLDDMSRARFKATAASYNPI 348

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK+GK D  V  ++ ++ R   PN  TYN +   L   G       I+  +    +
Sbjct: 349 IARLCKEGKVDLVVKCLDQMMYRRCNPNEGTYNAI-AVLCEEGKVQEAFSIIQSLGNKQN 407

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S T   Y  +I+ LC+ G    A     +M      PD  TY++++  LC EGML+EA++
Sbjct: 408 SSTHDFYKGVISSLCRKGNTYPAFQLLYEMTKYGFVPDSYTYSSLIRGLCSEGMLDEAME 467

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +  ++  + C P +  +N LI GL K    + +++++  M++ G  P++ T+  ++ G  
Sbjct: 468 IFSIMEENYCRPDVDNFNALILGLCKCRKTDLSLMVFEMMVKKGYMPNETTYTIIVEGIA 527

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
             +++E A  +LKE+  R    R++  RLV+ 
Sbjct: 528 HQEEMELAAAVLKELYLRQAVGRSTLERLVMQ 559


>gi|357521609|ref|XP_003631093.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355525115|gb|AET05569.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 788

 Score =  243 bits (621), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/449 (31%), Positives = 234/449 (52%), Gaps = 1/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   CS G+  + ++L+  M R N  PD +    LI  L +  RI +A  VL
Sbjct: 229 DAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVL 288

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M   G  PD +TYN ++ G C R  +  A  L + M   G EPDV+ YN ++      
Sbjct: 289 AMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKT 348

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A+  +K+   K   P + +Y  LI+ +C    I+   ++LD+M      PD+VTY
Sbjct: 349 KMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTY 408

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  CK+G+  +A+ V+  ++ +G++PN +TYN ++     R   +    I + M +
Sbjct: 409 NILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P +  YN+LING CK  +VD AI  F +M  KN  PDI +YN+++  LC  G +  
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPH 528

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
             +LL  +  S  SP +ITYN L+D   K    +KA+ L+ Q++E GI PD  T+  ++ 
Sbjct: 529 VQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVD 587

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             C+ ++++ A D LK +   G       Y ++I+ LCK      A+ +L  M  +   P
Sbjct: 588 NLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPP 647

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           D   F  I+  +     T++A KL +++I
Sbjct: 648 DAITFEIIIGVLLQRNETDKAEKLREEMI 676



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 237/477 (49%), Gaps = 14/477 (2%)

Query: 95  TITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHF 154
           TI K  + P+L             T N I+  FC  G +  A      +  +  + D   
Sbjct: 115 TILKSGYQPNL------------VTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFT 162

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
              LI GL +  +I+ A  +LQ M  S   P+ + Y+ ++ GLCK G +  A+ L  ++ 
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G   D +TYN+++      G++++        +R+   P   T+ ILI+ +CK+  I 
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A  VL  M+  G  PDIVTYN+L+   C +    +A  + N ++ RG+EP+ + YN L+
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                    D    +   +   +  PT+ +YN LI+GLC  G +       ++M      
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD+VTYN ++ ALCKEG + EAL +L ++      P ++TYN ++DG   +  +  A  +
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M+++G+ PD + +  LI G+C+ + V+EA+ L KE+  +      ++Y  +I GLC 
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE--WKVF 569
             ++    ++L+ M  S   PD   ++ ++         ++A  L+++++E  W  F
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDF 579



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 201/382 (52%), Gaps = 1/382 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +++ +CSR  + +A +L + M +R   PD      LI G  +   +++A  + 
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + +     VP   +YN ++ GLC  G+I     LLDEM  S   PDV+TYN ++  +   
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A+G     ++KG  P ++TY  +++  C +  +  A ++ + M   G  PDI+ Y
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNY 478

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK    D+A+++   +  + + P+  +YN+L+  L + G    V ++LD M +
Sbjct: 479 NVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCD 538

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +  SP V TYNIL++  CK    D+AI+ F Q+V +   PD  T + ++  LCK   L  
Sbjct: 539 SGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKM 597

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A   L  L    CSP + TY  LI+ L K G   +AM+L  +M +N   PD IT   +I 
Sbjct: 598 AEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
              + ++ ++A  L +E+  RG
Sbjct: 658 VLLQRNETDKAEKLREEMIARG 679



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 229/485 (47%), Gaps = 40/485 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T   ++      G++  A  L+  M + +  P+      LI GL +   +  A  + 
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +   G + D +TYN ++ G C  G+ +    LL +M     +PD  T+N ++  +   
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A G      ++G  P ++TY  L+E  C +  +  A E+ + M   G  PD++ Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  CK    D+A+++   L ++ + P   +YN+L+  L + G    V K+LD M+ 
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAI--------------------------------- 382
           ++  P V TYNILI+ LCK G +  A+                                 
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 383 --NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
             + FN+MV    +PDI+ YN ++   CK  M++EA+ L   +   +  P + +YN+LID
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI--GKRGN 498
           GL   G +     L  +M ++G SPD IT+  L+  FC+    ++A+ L ++I  G   +
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPD 578

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
              N A   ++  LCK +K+ MA   L+ ++     P+   ++ ++  +  DG   EA  
Sbjct: 579 FYTNHA---IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635

Query: 559 LWQKL 563
           L  K+
Sbjct: 636 LLSKM 640



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 209/443 (47%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +K+L      G    A  L   +  +   P       LI           A  +L  ++ 
Sbjct: 59  DKLLGAIVRMGHYPTAISLFTQLQSKGISPSIATFTILINCYFHQSHTAFAFSLLATILK 118

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           SG  P+ +T+N ++ G C  G I  A+     +   G   D  TY T++  +  NG+ K 
Sbjct: 119 SGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLINGLSKNGQIKA 178

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   ++  +    P L+ Y+ LI+ +CK   ++ A+ +   +   G   D VTYNSL++
Sbjct: 179 ALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILLDAVTYNSLID 238

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G++ +   ++  ++   ++P+  T+N L+ +L   G       +L +M++    P
Sbjct: 239 GCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVLAMMSKRGEKP 298

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TYN L+ G C    V  A   FN+MV +  +PD++ YN ++   CK  M++EA+ L 
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             L   +  P + +YN+LIDGL   G +     L  +M  +   PD +T+  LI   C+ 
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++ EA+ +L  + K+G K     Y  ++ G C    V++A  +   M+ S  +PD   +
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNY 478

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++       M +EA  L++++
Sbjct: 479 NVLINGYCKTEMVDEAIVLFKEM 501



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 202/417 (48%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C    + DA    + M R    P       L+  ++R+     A  +   +   G  P  
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            T+ +++     +     A +LL  +  SG +P+++T+NTI+     NG   +A+ F ++
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            L +G      TY  LI  + K   I  A+ +L +M      P++V Y++L++  CK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
             DA+ + + +  RG+  +++TYN+L+    S G W  V ++L  M   +  P  +T+NI
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LI+ LCK G +  A      M  +  +PDIVTYN ++   C    ++EA +L + +    
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P ++ YN LIDG  K   +++AMVL+ ++    + P   ++ +LI G C + ++    
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            LL E+           Y ++I  LCK  ++  A+ VL +M+    KP+   ++ ++
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/394 (27%), Positives = 186/394 (47%), Gaps = 35/394 (8%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C+   +  A+   + M      P    ++ +L  +   G +  AI  +     KG  P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            T+TILI     Q   A A  +L  +   G  P++VT+N+++N  C  G    A+    N
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           LL++G   +  TY TL++ L   G   A   +L  M ++S  P +  Y+ LI+GLCK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 378 VDRAIN---------------SFN--------------------QMVSKNCQPDIVTYNT 402
           V  A+                ++N                    +MV +N  PD  T+N 
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++ ALCKEG + EA  +L +++     P ++TYN L++G   +  + +A  L+ +M++ G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + PD + +  LI G+C+   V+EA+ L KE+  +      ++Y  +I GLC S ++    
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           ++L+ M  S   PD   ++ ++  +  +G   EA
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEA 424



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 145/298 (48%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   +  A+   + M      P    ++ L+    + G Y  A+ +   L S+G+ P+ 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
            T+  L++    +        +L  + ++ + P + T+N +ING C  G++ +A++    
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           ++++    D  TY T++  L K G +  AL LL  +  SS  P L+ Y+ LIDGL K G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +  A+ L  Q+ E GI  D +T+ +LI G C   + +E   LL ++ +      +  + +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +I  LCK  ++  A  VL +M     KPD   ++ +++         EA +L+ ++++
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 120/255 (47%)

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
           +C+    DDAV   N ++     P +  ++ LL ++   G +     +   +     SP+
Sbjct: 30  NCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPS 89

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + T+ ILIN          A +    ++    QP++VT+NT++   C  GM+ +AL    
Sbjct: 90  IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L          TY TLI+GL+K G ++ A+ L  +M ++ + P+ + +  LI G C+  
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            V +A+ L  +IG+RG  +    Y  +I G C   +     Q+L  M+     PDD  F+
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 542 TIVKKVADDGMTEEA 556
            ++  +  +G   EA
Sbjct: 270 ILIDALCKEGRILEA 284


>gi|144923530|gb|ABE80159.2| Tetratricopeptide-like helical [Medicago truncatula]
          Length = 695

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 143/449 (31%), Positives = 234/449 (52%), Gaps = 1/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   CS G+  + ++L+  M R N  PD +    LI  L +  RI +A  VL
Sbjct: 229 DAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVL 288

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M   G  PD +TYN ++ G C R  +  A  L + M   G EPDV+ YN ++      
Sbjct: 289 AMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKT 348

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A+  +K+   K   P + +Y  LI+ +C    I+   ++LD+M      PD+VTY
Sbjct: 349 KMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTY 408

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  CK+G+  +A+ V+  ++ +G++PN +TYN ++     R   +    I + M +
Sbjct: 409 NILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P +  YN+LING CK  +VD AI  F +M  KN  PDI +YN+++  LC  G +  
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPH 528

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
             +LL  +  S  SP +ITYN L+D   K    +KA+ L+ Q++E GI PD  T+  ++ 
Sbjct: 529 VQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVE-GIWPDFYTNHAIVD 587

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             C+ ++++ A D LK +   G       Y ++I+ LCK      A+ +L  M  +   P
Sbjct: 588 NLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPP 647

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           D   F  I+  +     T++A KL +++I
Sbjct: 648 DAITFEIIIGVLLQRNETDKAEKLREEMI 676



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 237/477 (49%), Gaps = 14/477 (2%)

Query: 95  TITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHF 154
           TI K  + P+L             T N I+  FC  G +  A      +  +  + D   
Sbjct: 115 TILKSGYQPNL------------VTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFT 162

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
              LI GL +  +I+ A  +LQ M  S   P+ + Y+ ++ GLCK G +  A+ L  ++ 
Sbjct: 163 YGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIG 222

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G   D +TYN+++      G++++        +R+   P   T+ ILI+ +CK+  I 
Sbjct: 223 ERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRIL 282

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A  VL  M+  G  PDIVTYN+L+   C +    +A  + N ++ RG+EP+ + YN L+
Sbjct: 283 EAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLI 342

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                    D    +   +   +  PT+ +YN LI+GLC  G +       ++M      
Sbjct: 343 DGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQP 402

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD+VTYN ++ ALCKEG + EAL +L ++      P ++TYN ++DG   +  +  A  +
Sbjct: 403 PDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDI 462

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M+++G+ PD + +  LI G+C+ + V+EA+ L KE+  +      ++Y  +I GLC 
Sbjct: 463 FNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCN 522

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE--WKVF 569
             ++    ++L+ M  S   PD   ++ ++         ++A  L+++++E  W  F
Sbjct: 523 LGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPDF 579



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/382 (31%), Positives = 201/382 (52%), Gaps = 1/382 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +++ +CSR  + +A +L + M +R   PD      LI G  +   +++A  + 
Sbjct: 299 DIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKTKMVDEAMVLF 358

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + +     VP   +YN ++ GLC  G+I     LLDEM  S   PDV+TYN ++  +   
Sbjct: 359 KELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTYNILIDALCKE 418

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A+G     ++KG  P ++TY  +++  C +  +  A ++ + M   G  PDI+ Y
Sbjct: 419 GRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVKSGLEPDILNY 478

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK    D+A+++   +  + + P+  +YN+L+  L + G    V ++LD M +
Sbjct: 479 NVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLIDGLCNLGRIPHVQELLDEMCD 538

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +  SP V TYNIL++  CK    D+AI+ F Q+V +   PD  T + ++  LCK   L  
Sbjct: 539 SGQSPDVITYNILLDAFCKTQPFDKAISLFRQIV-EGIWPDFYTNHAIVDNLCKGEKLKM 597

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A   L  L    CSP + TY  LI+ L K G   +AM+L  +M +N   PD IT   +I 
Sbjct: 598 AEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAMLLLSKMEDNDRPPDAITFEIIIG 657

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
              + ++ ++A  L +E+  RG
Sbjct: 658 VLLQRNETDKAEKLREEMIARG 679



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 130/485 (26%), Positives = 229/485 (47%), Gaps = 40/485 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T   ++      G++  A  L+  M + +  P+      LI GL +   +  A  + 
Sbjct: 159 DQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLC 218

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +   G + D +TYN ++ G C  G+ +    LL +M     +PD  T+N ++  +   
Sbjct: 219 SQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKE 278

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A G      ++G  P ++TY  L+E  C +  +  A E+ + M   G  PD++ Y
Sbjct: 279 GRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNY 338

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  CK    D+A+++   L ++ + P   +YN+L+  L + G    V K+LD M+ 
Sbjct: 339 NVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHG 398

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAI--------------------------------- 382
           ++  P V TYNILI+ LCK G +  A+                                 
Sbjct: 399 SAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNV 458

Query: 383 --NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
             + FN+MV    +PDI+ YN ++   CK  M++EA+ L   +   +  P + +YN+LID
Sbjct: 459 AKDIFNRMVKSGLEPDILNYNVLINGYCKTEMVDEAIVLFKEMRHKNLIPDIASYNSLID 518

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI--GKRGN 498
           GL   G +     L  +M ++G SPD IT+  L+  FC+    ++A+ L ++I  G   +
Sbjct: 519 GLCNLGRIPHVQELLDEMCDSGQSPDVITYNILLDAFCKTQPFDKAISLFRQIVEGIWPD 578

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
              N A   ++  LCK +K+ MA   L+ ++     P+   ++ ++  +  DG   EA  
Sbjct: 579 FYTNHA---IVDNLCKGEKLKMAEDALKHLLMHGCSPNVQTYTILINALCKDGSFGEAML 635

Query: 559 LWQKL 563
           L  K+
Sbjct: 636 LLSKM 640



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 197/393 (50%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  +L  ++ SG  P+ +T+N ++ G C  G I  A+     +   G   D  TY T++ 
Sbjct: 109 AFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQNLLAQGYLFDQFTYGTLIN 168

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +  NG+ K A+   ++  +    P L+ Y+ LI+ +CK   ++ A+ +   +   G   
Sbjct: 169 GLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGFVSDALGLCSQIGERGILL 228

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D VTYNSL++  C  G++ +   ++  ++   ++P+  T+N L+ +L   G       +L
Sbjct: 229 DAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNILIDALCKEGRILEAQGVL 288

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
            +M++    P + TYN L+ G C    V  A   FN+MV +  +PD++ YN ++   CK 
Sbjct: 289 AMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRGLEPDVLNYNVLIDGYCKT 348

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
            M++EA+ L   L   +  P + +YN+LIDGL   G +     L  +M  +   PD +T+
Sbjct: 349 KMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVKKLLDEMHGSAQPPDVVTY 408

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             LI   C+  ++ EA+ +L  + K+G K     Y  ++ G C    V++A  +   M+ 
Sbjct: 409 NILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMMDGYCLRNNVNVAKDIFNRMVK 468

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           S  +PD   ++ ++       M +EA  L++++
Sbjct: 469 SGLEPDILNYNVLINGYCKTEMVDEAIVLFKEM 501



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 112/417 (26%), Positives = 202/417 (48%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C    + DA    + M R    P       L+  ++R+     A  +   +   G  P  
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            T+ +++     +     A +LL  +  SG +P+++T+NTI+     NG   +A+ F ++
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            L +G      TY  LI  + K   I  A+ +L +M      P++V Y++L++  CK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
             DA+ + + +  RG+  +++TYN+L+    S G W  V ++L  M   +  P  +T+NI
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LI+ LCK G +  A      M  +  +PDIVTYN ++   C    ++EA +L + +    
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P ++ YN LIDG  K   +++AMVL+ ++    + P   ++ +LI G C + ++    
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            LL E+           Y ++I  LCK  ++  A+ VL +M+    KP+   ++ ++
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEALGVLVMMMKKGVKPNIVTYNAMM 447



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 108/394 (27%), Positives = 185/394 (46%), Gaps = 35/394 (8%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C+   +  A+   + M      P    ++ +L  +   G +  AI  +     KG  P +
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            T+TILI     Q   A A  +L  +   G  P++VT+N+++N  C  G    A+    N
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           LL++G   +  TY TL++ L   G   A   +L  M ++S  P +  Y+ LI+GLCK G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 378 VDRAI------------------NS-----------------FNQMVSKNCQPDIVTYNT 402
           V  A+                  NS                   +MV +N  PD  T+N 
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++ ALCKEG + EA  +L +++     P ++TYN L++G   +  + +A  L+ +M++ G
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVKRG 330

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + PD + +  LI G+C+   V+EA+ L KE+  +      ++Y  +I GLC S ++    
Sbjct: 331 LEPDVLNYNVLIDGYCKTKMVDEAMVLFKELCNKNLVPTIASYNSLIDGLCNSGRISHVK 390

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           ++L+ M  S   PD   ++ ++  +  +G   EA
Sbjct: 391 KLLDEMHGSAQPPDVVTYNILIDALCKEGRILEA 424



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/298 (25%), Positives = 145/298 (48%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   +  A+   + M      P    ++ L+    + G Y  A+ +   L S+G+ P+ 
Sbjct: 31  CRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPSI 90

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
            T+  L++    +        +L  + ++ + P + T+N +ING C  G++ +A++    
Sbjct: 91  ATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQN 150

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           ++++    D  TY T++  L K G +  AL LL  +  SS  P L+ Y+ LIDGL K G 
Sbjct: 151 LLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDGF 210

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +  A+ L  Q+ E GI  D +T+ +LI G C   + +E   LL ++ +      +  + +
Sbjct: 211 VSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFNI 270

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +I  LCK  ++  A  VL +M     KPD   ++ +++         EA +L+ ++++
Sbjct: 271 LIDALCKEGRILEAQGVLAMMSKRGEKPDIVTYNALMEGYCSRENVHEARELFNRMVK 328



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 68/255 (26%), Positives = 120/255 (47%)

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
           +C+    DDAV   N ++     P +  ++ LL ++   G +     +   +     SP+
Sbjct: 30  NCRFRNVDDAVTCFNRMVRVFPPPPTSVFDKLLGAIVRMGHYPTAISLFTQLQSKGISPS 89

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + T+ ILIN          A +    ++    QP++VT+NT++   C  GM+ +AL    
Sbjct: 90  IATFTILINCYFHQSHTAFAFSLLATILKSGYQPNLVTFNTIINGFCINGMIFKALDFCQ 149

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L          TY TLI+GL+K G ++ A+ L  +M ++ + P+ + +  LI G C+  
Sbjct: 150 NLLAQGYLFDQFTYGTLINGLSKNGQIKAALHLLQEMEKSSVQPNLVMYSALIDGLCKDG 209

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            V +A+ L  +IG+RG  +    Y  +I G C   +     Q+L  M+     PDD  F+
Sbjct: 210 FVSDALGLCSQIGERGILLDAVTYNSLIDGCCSVGRWQEVTQLLTKMVRENVDPDDYTFN 269

Query: 542 TIVKKVADDGMTEEA 556
            ++  +  +G   EA
Sbjct: 270 ILIDALCKEGRILEA 284


>gi|302808965|ref|XP_002986176.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
 gi|300146035|gb|EFJ12707.1| hypothetical protein SELMODRAFT_182249 [Selaginella moellendorffii]
          Length = 609

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 239/452 (52%), Gaps = 37/452 (8%)

Query: 149 IPDFHFCI----NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
           IP F        +L++ L+R  +  +A  + +  +++   PD  +YN+++ G C  G + 
Sbjct: 70  IPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDLH 129

Query: 205 SAIALLDEMSVSG--------------------------------CEPDVITYNTILRTM 232
           +A+ LL+EM  +G                                C+P+V+TY  ++   
Sbjct: 130 AALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGAMDHLRSMGCDPNVVTYTALIAAF 189

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K ++A+   ++   +GCPP L+TY +L++ +CK   +  A +V+  M   G +P++
Sbjct: 190 ARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNV 249

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +T+NSLV+  CK+G  DDA  ++  ++++GM PN +TY+ L+  L     +    ++L+ 
Sbjct: 250 MTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEE 309

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M     +P  FTY+ LI+GLCK   ++ A     +M    C PD+V Y++++ A CK G 
Sbjct: 310 MKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGK 369

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-ISPDDITHR 471
           L EA + L  +     SP ++TYNT+IDGL K G + +A V+  QM E+G + PD +T+ 
Sbjct: 370 LLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYS 429

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           T+I G C++D + EA  LL  + K G       Y  +I GLCK  +++ A  +L+ M  +
Sbjct: 430 TVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRA 489

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              P+   ++T++  +      +EA ++ +++
Sbjct: 490 GCAPNVVTYTTLISGLCKARKVDEAERVMEEM 521



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 144/451 (31%), Positives = 240/451 (53%), Gaps = 6/451 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T+  I+    + G L  A   +D +      P+      LI    R  ++E+A K+L
Sbjct: 146 DAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLL 202

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  P+ +TYN++V  LCK   + +A  ++ +M   G  P+V+T+N+++      
Sbjct: 203 EEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKR 262

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A       + KG  P ++TY+ LI+ +CK      A EVL++M   G +PD  TY
Sbjct: 263 GNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTY 322

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  CK  K ++A  ++  +   G  P+ + Y++++H+    G      K L  M +
Sbjct: 323 SALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRK 382

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV-SKNCQPDIVTYNTVLGALCKEGMLN 414
              SP V TYN +I+GLCK G +  A     QM  S +  PD+VTY+TV+  LCK  ML 
Sbjct: 383 QRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLV 442

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +LL  +  + C+P ++TY T+IDGL K G +E+A  L   M   G +P+ +T+ TLI
Sbjct: 443 EAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLI 502

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+A +V+EA  +++E+   G       Y  +++GLC S ++  A Q+++ M   R +
Sbjct: 503 SGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAE 562

Query: 535 --PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             PD   + TIV  +    + +EA +L +++
Sbjct: 563 CSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 134/416 (32%), Positives = 221/416 (53%), Gaps = 3/416 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  F    KL +A KL++ M  R   P+      L+  L ++  +  A  V++ M
Sbjct: 181 TYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKM 240

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+ +T+N +V G CKRG +  A  LL  M   G  P+V+TY+ ++  +  + KF
Sbjct: 241 IEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 300

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A    ++   +G  P   TY+ LI  +CK   I  A ++L  MA  GC+PD+V Y+S+
Sbjct: 301 LEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 360

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK  +A   +  +  +   P+ +TYNT++  L   G       IL+ M E+  
Sbjct: 361 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGD 420

Query: 359 S-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TY+ +INGLCK  ++  A    ++M    C PD+VTY T++  LCK G L EA 
Sbjct: 421 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 480

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            LL  +  + C+P ++TY TLI GL K   +++A  +  +M   G  P+ +T+ T++ G 
Sbjct: 481 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 540

Query: 478 CRADQVEEAVDLLKEI--GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           C + +++EA  L++ +  G+       + YR +++ L  S  V  A Q+LE M S+
Sbjct: 541 CVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKST 596



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/353 (33%), Positives = 188/353 (53%), Gaps = 4/353 (1%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           +G F  N   T N ++  FC RG + DA KL+ IM  +   P+      LI GL +  + 
Sbjct: 242 EGGFAPN-VMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKF 300

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A +VL+ M   G  PD  TY+ ++ GLCK  +I  A  +L  M+ SGC PDV+ Y++I
Sbjct: 301 LEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSI 360

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG- 287
           +     +GK  +A    ++  ++   P ++TY  +I+ +CK   IA A  +L+ M   G 
Sbjct: 361 IHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGD 420

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD+VTY++++N  CK     +A  +++ +   G  P+ +TY T++  L   G  +  +
Sbjct: 421 VLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAE 480

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            +L  M  A  +P V TY  LI+GLCK   VD A     +M +  C P++VTYNT++  L
Sbjct: 481 YLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGL 540

Query: 408 CKEGMLNEALQLLHLLNG--SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           C  G + EA QL+  +    + CSP   TY T+++ L     +++A  L  QM
Sbjct: 541 CVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 593



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 183/352 (51%), Gaps = 3/352 (0%)

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
           S+ G      ++N++L+ +    K ++A   ++ +L   C P + +Y I+I   C    +
Sbjct: 69  SIPGFSHTAFSWNSLLQVLVRCKKHREAGDLFRSELLASCEPDVCSYNIVISGFCNAGDL 128

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A+E+L++M   G +PD  T+  ++      G  D A   +++L S G +PN +TY  L
Sbjct: 129 HAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTAL 185

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           + +       +   K+L+ M E    P + TYN+L++ LCK  +V  A +   +M+    
Sbjct: 186 IAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGF 245

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P+++T+N+++   CK G +++A +LL ++      P ++TY+ LIDGL K     +A  
Sbjct: 246 APNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKE 305

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +  +M   G++PD  T+  LI G C+AD++EEA  +L+ +   G       Y  +IH  C
Sbjct: 306 VLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFC 365

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           KS K+  A + L+ M   R  PD   ++T++  +   G   EA  + +++ E
Sbjct: 366 KSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQE 417



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 98/314 (31%), Positives = 163/314 (51%), Gaps = 3/314 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C   K  +A ++++ M  R   PD      LI GL + D+IE+A ++L+ M
Sbjct: 286 TYSALIDGLCKSQKFLEAKEVLEEMKTRGVTPDAFTYSALIHGLCKADKIEEAEQMLRRM 345

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG  PD + Y+ ++   CK G++  A   L EM      PDV+TYNT++  +   GK 
Sbjct: 346 AGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKI 405

Query: 239 KQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            +A    +     G   P ++TY+ +I  +CK   +  A ++LD M   GC+PD+VTY +
Sbjct: 406 AEAQVILEQMQESGDVLPDVVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTT 465

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  CK G+ ++A  ++  +   G  PN +TY TL+  L      D  +++++ M  A 
Sbjct: 466 IIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEMRNAG 525

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVS--KNCQPDIVTYNTVLGALCKEGMLNE 415
             P + TYN ++NGLC  G +  A     +M      C PD  TY T++ AL    ++ E
Sbjct: 526 CPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAECSPDAATYRTIVNALMSSDLVQE 585

Query: 416 ALQLLHLLNGSSCS 429
           A QLL  +  ++ S
Sbjct: 586 AEQLLEQMKSTTSS 599



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 87/281 (30%), Positives = 143/281 (50%), Gaps = 3/281 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T + ++   C   K+ +A +++  MA     PD     ++I    +  ++ +A 
Sbjct: 315 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 374

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRT 231
           K LQ M      PD +TYN ++ GLCK G+I  A  +L++M  SG   PDV+TY+T++  
Sbjct: 375 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILEQMQESGDVLPDVVTYSTVING 434

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  +    +A        + GC P ++TYT +I+ +CK   +  A  +L  M   GC+P+
Sbjct: 435 LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 494

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VTY +L++  CK  K D+A  V+  + + G  PN +TYNT+++ L   G      +++ 
Sbjct: 495 VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQ 554

Query: 352 IMNE--ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
            M +  A  SP   TY  ++N L    LV  A     QM S
Sbjct: 555 RMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQMKS 595


>gi|302806555|ref|XP_002985027.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
 gi|300147237|gb|EFJ13902.1| hypothetical protein SELMODRAFT_11856 [Selaginella moellendorffii]
          Length = 443

 Score =  243 bits (620), Expect = 2e-61,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 227/441 (51%), Gaps = 2/441 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++      G L  A  L           D H    ++  L +  +I++A  +++ +  +G
Sbjct: 5   LINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKITANG 64

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P   TYN ++ GLCK G++  AI LL ++  +GC PDV+TY +++  +    +  +A 
Sbjct: 65  CTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAY 124

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +K+   +G     + YT LI  + +   I +A  V   M  +GC PD+VT +++++  
Sbjct: 125 KLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTMIDGL 184

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G+   AV +  ++ +RG+ PN + Y+ L+H L      D   ++L  M +A  +P  
Sbjct: 185 CKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDT 244

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYNILI+GLCK G V  A   F++M+   C+PD+ TYN ++   CK G  + A  +   
Sbjct: 245 ITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDD 304

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++ S CSP ++TY TLI GL K+  + KA + Y  M E G  PD   + +L+ G C++ +
Sbjct: 305 MSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLCKSGK 364

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E    L  E+ + G     +  RL+ H LCK+ +VD A+ +    I     P    +++
Sbjct: 365 LEGGCMLFDEMERSGVANSQTRTRLIFH-LCKANRVDEAVSLFN-AIRKEGMPHPYAYNS 422

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           I+  +   G   E   ++Q++
Sbjct: 423 IISALIKSGKVNEGQAVYQEM 443



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 133/413 (32%), Positives = 209/413 (50%), Gaps = 2/413 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+       K+ +A  L++ +      P       L+ GL ++ R+E+A  +L
Sbjct: 33  DIHTYTTIVDWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLL 92

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + +V +G  PD +TY  ++ GL K+ +   A  L  EM+  G   D + Y  ++R +   
Sbjct: 93  RKIVDNGCTPDVVTYTSLIDGLGKKKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQA 152

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  QA   +K    +GC P ++T + +I+ +CK   I  A+ +   M   G +P+ V Y
Sbjct: 153 GKIPQASSVYKTMTSQGCVPDVVTLSTMIDGLCKAGRIGAAVRIFKSMEARGLAPNEVVY 212

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  CK  K D A+ ++  +      P++ITYN L+  L   G   A     D M E
Sbjct: 213 SALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVAAARAFFDEMLE 272

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A   P V+TYNILI+G CK G  D A   F+ M S  C P++VTY T++  LCK   L +
Sbjct: 273 AGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTK 332

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A      +    C P    Y++L+DGL K G +E   +L+ +M  +G++ +  T   LI+
Sbjct: 333 ASLYYQHMKERGCPPDSFVYSSLVDGLCKSGKLEGGCMLFDEMERSGVA-NSQTRTRLIF 391

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
             C+A++V+EAV L   I K G      AY  +I  L KS KV+    V + M
Sbjct: 392 HLCKANRVDEAVSLFNAIRKEGMP-HPYAYNSIISALIKSGKVNEGQAVYQEM 443



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 190/375 (50%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T+++++ GL K G +  A +L  E + +GC  D+ TY TI+  +  N K ++A+   +  
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
              GC P + TY  L+  +CK   +  AI++L  +   GC+PD+VTY SL++   K+ + 
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            +A  +   + SRG+  +++ Y  L+  L   G       +   M      P V T + +
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I+GLCK G +  A+  F  M ++   P+ V Y+ ++  LCK   ++ AL++L  +  + C
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P  ITYN LIDGL K G +  A   + +M+E G  PD  T+  LI GFC+A   + A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           +  ++           Y  +I GLCK +++  A    + M      PD  V+S++V  + 
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDGLC 360

Query: 549 DDGMTEEAYKLWQKL 563
             G  E    L+ ++
Sbjct: 361 KSGKLEGGCMLFDEM 375



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 170/342 (49%)

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           T++ ++  +   G   QA    ++    GC   + TYT +++ + K   I  A+ +++ +
Sbjct: 1   TFSILINGLVKAGMLIQAHSLAQETTTNGCTIDIHTYTTIVDWLAKNKKIQEAVALMEKI 60

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              GC+P I TYN+L+N  CK G+ ++A+ ++  ++  G  P+ +TY +L+  LG +   
Sbjct: 61  TANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKKKRS 120

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
               K+   M     +     Y  LI GL + G + +A + +  M S+ C PD+VT +T+
Sbjct: 121 FEAYKLFKEMASRGLALDTVCYTALIRGLLQAGKIPQASSVYKTMTSQGCVPDVVTLSTM 180

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +  LCK G +  A+++   +     +P  + Y+ LI GL K   M+ A+ +  QM +   
Sbjct: 181 IDGLCKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFC 240

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           +PD IT+  LI G C++  V  A     E+ + G K     Y ++I G CK+   D A  
Sbjct: 241 TPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACG 300

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           V + M SSR  P+   + T++  +       +A   +Q + E
Sbjct: 301 VFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKE 342



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/207 (26%), Positives = 87/207 (42%), Gaps = 2/207 (0%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F   D  T N ++   C  G +  A    D M      PD +    LI G  +    + A
Sbjct: 239 FCTPDTITYNILIDGLCKSGDVAAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAA 298

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             V   M  S   P+ +TY  ++ GLCKR Q+  A      M   GC PD   Y++++  
Sbjct: 299 CGVFDDMSSSRCSPNVVTYGTLISGLCKRRQLTKASLYYQHMKERGCPPDSFVYSSLVDG 358

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  +GK +     + +  R G      T T LI  +CK   +  A+ + + +  EG  P 
Sbjct: 359 LCKSGKLEGGCMLFDEMERSGVANSQ-TRTRLIFHLCKANRVDEAVSLFNAIRKEG-MPH 416

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNL 318
              YNS+++   K GK ++   V   +
Sbjct: 417 PYAYNSIISALIKSGKVNEGQAVYQEM 443


>gi|302770783|ref|XP_002968810.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
 gi|300163315|gb|EFJ29926.1| hypothetical protein SELMODRAFT_91015 [Selaginella moellendorffii]
          Length = 545

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 130/456 (28%), Positives = 242/456 (53%), Gaps = 6/456 (1%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N  +   C   ++ DA +L+  M  +  +P       L+ GL++  R+++A  
Sbjct: 39  EPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMA 98

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL+ MV  G  P   TY +++ GL K G++  A  +  +M  +GC PD   Y  +++ + 
Sbjct: 99  VLEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLC 158

Query: 234 DNGKFKQAIGFWKD----QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GC 288
            +GK ++A   +K+    +      P ++TYT LI+ +CK   I  A +V DD A+E G 
Sbjct: 159 KSGKPEEAYALYKEANARKHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGF 218

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD VTY S+++  CK G+ ++     + + +RG EP+++TY  L+             +
Sbjct: 219 IPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHR 278

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M ++    +  TYNI+++GLCK G V  A  +F  M  + C   +VTY+ ++   C
Sbjct: 279 VYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFC 338

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
            EG ++ A++L   +    C P L++YN +I GL + G + KA   + ++++  + PD  
Sbjct: 339 SEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVY 398

Query: 469 THRTLIWGFC-RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           T    + G C R D V + V+L + +  +G      +Y +++ G+C++  +++A+++   
Sbjct: 399 TFNAFLHGLCQRLDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFRE 458

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M+S    PD  VF+T+++ +   G  +EA +++++L
Sbjct: 459 MVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFREL 494



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 117/420 (27%), Positives = 197/420 (46%), Gaps = 32/420 (7%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD      +I GL R  R+++A  VL+  V +G  PD +TYN+ + GLCK  ++  A  L
Sbjct: 5   PDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQL 64

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L +M    C P  +TY  ++  +   G+  +A+   +  + KG  P L TYT++I+ + K
Sbjct: 65  LKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGLSK 124

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A  +  DM   GC PD   Y +L+   CK GK ++A  +     +R        
Sbjct: 125 AGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANAR-------- 176

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN-QM 388
                                   + A+  P V TY  LI+GLCK G +  A   F+ + 
Sbjct: 177 -----------------------KHHATAVPDVVTYTSLIDGLCKAGRILEARQVFDDEA 213

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           V +   PD VTY +++  LCK G + E  +  H +      P  +TY  LIDG  K   +
Sbjct: 214 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 273

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            KA  +Y QM+++G     +T+  ++ G C+A +V EA      + +RG       Y  +
Sbjct: 274 PKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSAL 333

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + G C    V  A+++   M+    +P+   ++ I++ +   G   +AY  ++KL++ ++
Sbjct: 334 MDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 393



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 194/383 (50%), Gaps = 18/383 (4%)

Query: 97  TKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMA-RRNQIPDFHFC 155
            +K H  ++P         D  T   ++   C  G++ +A ++ D  A  R  IPD    
Sbjct: 175 ARKHHATAVP---------DVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTY 225

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
            ++I GL ++ R+E+  +    M   G  PD +TY  ++ G  K   I  A  +  +M  
Sbjct: 226 TSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQ 285

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
           SG     +TYN IL  +   G+  +A   +     +GC   ++TY+ L++  C +  ++ 
Sbjct: 286 SGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSA 345

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+E+   M   GC P++V+YN ++   C+ GK   A      LL R + P+  T+N  LH
Sbjct: 346 AVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNAFLH 405

Query: 336 SLGSRGCWDAVD---KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
            L  R   D V    ++ + M     SP + +Y+IL++G+C+ G ++ A+  F +MVS+ 
Sbjct: 406 GLCQR--LDTVSDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVALEIFREMVSRG 463

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             PD+V +NT++  LC  G ++EAL++   L   S +P   +Y +L+DGL++   ME+A 
Sbjct: 464 VAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDGLSRCERMEEAR 522

Query: 453 VLYGQMMENGISPD--DITHRTL 473
           +L   M   G +P   D+T R L
Sbjct: 523 LLSFHMKLQGCAPRHYDLTVRFL 545



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 98/318 (30%), Positives = 158/318 (49%), Gaps = 5/318 (1%)

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
           C P ++ +T++I  +C++  +  A  VL+     GC PD VTYN  ++  CK  + DDA 
Sbjct: 3   CSPDMVAFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAF 62

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            ++  +  +   P ++TY  L+  L   G  D    +L+ M E  +SPT+ TY ++I+GL
Sbjct: 63  QLLKKMDEKKCLPTTVTYTALVDGLLKAGRLDEAMAVLEQMVEKGNSPTLKTYTVVIDGL 122

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG----SSC 428
            K G V+ A   F  M+   C+PD   Y  ++  LCK G   EA  L    N     ++ 
Sbjct: 123 SKAGRVEEARRIFVDMLGNGCRPDAFVYTALIKGLCKSGKPEEAYALYKEANARKHHATA 182

Query: 429 SPCLITYNTLIDGLAKKG-CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            P ++TY +LIDGL K G  +E   V   + +E G  PD +T+ ++I G C+  +VEE  
Sbjct: 183 VPDVVTYTSLIDGLCKAGRILEARQVFDDEAVERGFIPDAVTYTSIIDGLCKLGRVEEGC 242

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +   E+  RG +     Y  +I G  K+K +  A +V   M+ S        ++ I+  +
Sbjct: 243 ERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGL 302

Query: 548 ADDGMTEEAYKLWQKLIE 565
              G   EAY  +  + E
Sbjct: 303 CKAGRVAEAYATFLAMEE 320



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 21/74 (28%), Positives = 40/74 (54%)

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           A+ +VI+GLC+ K++D A  VLE  + +  +PD   ++  +  +      ++A++L +K+
Sbjct: 9   AFTVVINGLCREKRLDEAFSVLERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKM 68

Query: 564 IEWKVFEKGTTLLA 577
            E K      T  A
Sbjct: 69  DEKKCLPTTVTYTA 82


>gi|147771990|emb|CAN69053.1| hypothetical protein VITISV_022963 [Vitis vinifera]
          Length = 2021

 Score =  243 bits (619), Expect = 3e-61,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 233/448 (52%), Gaps = 4/448 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++ +FC   ++  A  ++  + +    PD      LIRGL    +I +A  +   M
Sbjct: 102 TLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKM 161

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+ +TY  ++ GLCK G   +AI LL  M    C+PDV+ Y +I+ ++  + + 
Sbjct: 162 IDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQV 221

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +   + +G  P + TYT L+  +C  C       +L+ M      PD+V ++++
Sbjct: 222 TEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTV 281

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL--HSLGSRGCWDAVDKILDIMNEA 356
           V+  CK+GK  +A  +++ ++ RG+EP+ +TY TL+  H L S    D   K+ D+M   
Sbjct: 282 VDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEM--DEAVKVFDMMVRK 339

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             +P V +Y  LING CK   +D+A+  F +M  K   PD  TYNT++  LC  G L +A
Sbjct: 340 GFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDA 399

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           + L H +      P L+TY+ L+D L K   +E+AM L   +  + ++PD   +  +I G
Sbjct: 400 IALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDG 459

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            CRA ++E A DL   +  +G       Y ++IHGLCK   ++ A ++   M  +   PD
Sbjct: 460 MCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPD 519

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              ++TI +    +  T  A +L ++++
Sbjct: 520 GCTYNTIARGFLQNNETLRAIQLLEEML 547



 Score =  211 bits (537), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 207/421 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +++  C  GK+ +A  L D M      P+      LI GL ++     A ++L
Sbjct: 134 DPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 193

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      PD + Y  ++  LCK  Q+  A  L  +M   G  PD+ TY +++  + + 
Sbjct: 194 RSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNL 253

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            ++K         +     P ++ ++ +++ +CK+  +  A E++D M   G  PD+VTY
Sbjct: 254 CEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTY 313

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++  C Q + D+AV V + ++ +G  P+ I+Y TL++        D    + + M  
Sbjct: 314 TTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKIDKAMYLFEEMCR 373

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TYN L+ GLC  G +  AI  F++MV++   PD+VTY+ +L +LCK   L E
Sbjct: 374 KEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMVARGQMPDLVTYSILLDSLCKNRHLEE 433

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ LL  +  S+ +P +  YN +IDG+ + G +E A  L+  +   G+ P   T+  +I 
Sbjct: 434 AMALLKAIEASNLNPDIQVYNIIIDGMCRAGELEAARDLFSNLSSKGLHPSVWTYNIMIH 493

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+   + EA  L  E+           Y  +  G  ++ +   AIQ+LE M++  +  
Sbjct: 494 GLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEEMLARGFSA 553

Query: 536 D 536
           D
Sbjct: 554 D 554



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 228/431 (52%), Gaps = 6/431 (1%)

Query: 139 LIDIMARRNQIPDFH---FCINLIRGLIRIDRIEKASKVLQIMVM--SGGVPDTI-TYNM 192
           L D ++  N++   H     ++  + L  I +++  S VL +     S GVP  + T N+
Sbjct: 46  LDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNI 105

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++   C   ++  A ++L ++   G +PD  T+ T++R +   GK  +A+  +   + +G
Sbjct: 106 LINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEG 165

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P ++TY  LI  +CK    + AI +L  M    C PD+V Y S+++  CK  +  +A 
Sbjct: 166 FQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAF 225

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            + + ++ +G+ P+  TY +L+H+L +   W  V  +L+ M  +   P V  ++ +++ L
Sbjct: 226 NLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDAL 285

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G V  A    + M+ +  +PD+VTY T++   C +  ++EA+++  ++     +P +
Sbjct: 286 CKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDV 345

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           I+Y TLI+G  K   ++KAM L+ +M      PD  T+ TL++G C   ++++A+ L  E
Sbjct: 346 ISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHE 405

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +  RG       Y +++  LCK++ ++ A+ +L+ + +S   PD  V++ I+  +   G 
Sbjct: 406 MVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGMCRAGE 465

Query: 553 TEEAYKLWQKL 563
            E A  L+  L
Sbjct: 466 LEAARDLFSNL 476



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 174/345 (50%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P ++ +  +L ++     +   +         G PP + T  ILI   C    +  A  V
Sbjct: 63  PSIVDFAKLLTSIAKMKHYSTVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSV 122

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L  +   G  PD  T+ +L+   C +GK  +A+ + + ++  G +PN +TY TL++ L  
Sbjct: 123 LAKILKLGHQPDPTTFTTLIRGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCK 182

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G   A  ++L  M + +  P V  Y  +I+ LCK   V  A N F+QMV +   PDI T
Sbjct: 183 VGNTSAAIRLLRSMEQGNCQPDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFT 242

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y +++ ALC          LL+ +  S   P ++ ++T++D L K+G + +A  +   M+
Sbjct: 243 YTSLVHALCNLCEWKHVTTLLNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMI 302

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           + G+ PD +T+ TL+ G C   +++EAV +   + ++G      +Y  +I+G CK  K+D
Sbjct: 303 QRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKGFAPDVISYTTLINGYCKIHKID 362

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            A+ + E M    + PD   ++T++  +   G  ++A  L+ +++
Sbjct: 363 KAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAIALFHEMV 407



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 156/318 (49%), Gaps = 37/318 (11%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  GK+T+A +++D+M +R   PD      L+ G      +++A KV  +MV  G
Sbjct: 281 VVDALCKEGKVTEAHEIVDMMIQRGVEPDVVTYTTLMDGHCLQSEMDEAVKVFDMMVRKG 340

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD I+Y  ++ G CK  +I  A+ L +EM      PD  TYNT++  +   G+ + AI
Sbjct: 341 FAPDVISYTTLINGYCKIHKIDKAMYLFEEMCRKEWIPDTKTYNTLMYGLCHVGRLQDAI 400

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + + + +G  P L+TY+IL++ +CK   +  A+ +L  +     +PDI  YN +++  
Sbjct: 401 ALFHEMVARGQMPDLVTYSILLDSLCKNRHLEEAMALLKAIEASNLNPDIQVYNIIIDGM 460

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G+ + A  + +NL S+G+ P                                   +V
Sbjct: 461 CRAGELEAARDLFSNLSSKGLHP-----------------------------------SV 485

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH- 421
           +TYNI+I+GLCK GL++ A   F +M   +C PD  TYNT+     +      A+QLL  
Sbjct: 486 WTYNIMIHGLCKRGLLNEANKLFMEMDGNDCSPDGCTYNTIARGFLQNNETLRAIQLLEE 545

Query: 422 -LLNGSSCSPCLITYNTL 438
            L  G S   C +  + L
Sbjct: 546 MLARGFSADSCFLMLSVL 563



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 82/281 (29%), Positives = 134/281 (47%), Gaps = 4/281 (1%)

Query: 289 SPDIVTYNSLVN-FSCKQGKY---DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
           SP +  ++S  N F  K   +   DDA+   N LL     P+ + +  LL S+     + 
Sbjct: 23  SPPLPFFSSSQNNFHSKSLHFNTLDDALSSFNRLLHMHPPPSIVDFAKLLTSIAKMKHYS 82

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
            V  +   M+     P V+T NILIN  C    V  A +   +++    QPD  T+ T++
Sbjct: 83  TVLSLSTQMDSFGVPPNVYTLNILINSFCHLNRVGFAFSVLAKILKLGHQPDPTTFTTLI 142

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LC EG + EAL L   +      P ++TY TLI+GL K G    A+ L   M +    
Sbjct: 143 RGLCVEGKIGEALHLFDKMIDEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQ 202

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD + + ++I   C+  QV EA +L  ++  +G       Y  ++H LC   +      +
Sbjct: 203 PDVVIYTSIIDSLCKDRQVTEAFNLFSQMVGQGISPDIFTYTSLVHALCNLCEWKHVTTL 262

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           L  M++S+  PD  +FST+V  +  +G   EA+++   +I+
Sbjct: 263 LNQMVNSKILPDVVIFSTVVDALCKEGKVTEAHEIVDMMIQ 303


>gi|302756343|ref|XP_002961595.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
 gi|300170254|gb|EFJ36855.1| hypothetical protein SELMODRAFT_76510 [Selaginella moellendorffii]
          Length = 603

 Score =  242 bits (617), Expect = 4e-61,   Method: Compositional matrix adjust.
 Identities = 135/453 (29%), Positives = 232/453 (51%), Gaps = 4/453 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C  G++ +A  L + M R    P+      +I GL +  +I++A +V 
Sbjct: 114 DVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M      PD+ +Y +++ GL K G++  A  L   M  SG  P  +TYN ++  M   
Sbjct: 174 HEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLA 233

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A+  +K    KGC P   T+ ILI+  CK+  +  A  +L  M  +G  PD+VTY
Sbjct: 234 YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTY 293

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  C   + DDA  ++ +++ R  +P  +T NTL+H L   G      ++LD M  
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 353

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +  SP V TYN L++G C+ G  +RA    + MV++   P++VTY  ++  LCK   L E
Sbjct: 354 SGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE 413

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  +   +  S C+P L TY  LI G    G ++  + L+G+M+  GISPD + + TL  
Sbjct: 414 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAA 473

Query: 476 GFCRADQVEEAVDLLKEIGK---RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
             C++ +   A+++L+E G+   R     +  YR  + GL  + K++MA+  +  M+   
Sbjct: 474 ELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLDAGKMEMALGFVRDMVRGG 532

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             P     +++V  +   G   EA  + +++++
Sbjct: 533 QLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565



 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 228/440 (51%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C      DA +L   M RR   P       +I    +   +E+A  +++ M+  G
Sbjct: 51  LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDG 110

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD +TYN ++ GLCK G++  A+ L +EM   GC P+  ++NTI+  +    K  QA 
Sbjct: 111 HVPDVVTYNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   +  PP   +Y ILI+ + K   +  A ++   M   G +P  VTYN +++  
Sbjct: 171 QVFHEMEARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGM 230

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C     D+A+ +  ++ S+G  P+  T+N L+ +   RG  D   ++L  M +  H P V
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDV 290

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ LI+GLC    VD A +    MV + C+P +VT NT++  LCK G + EA ++L  
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 350

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  S  SP ++TYNTL+ G  + G  E+A  L   M+  G++P+ +T+  L+ G C+A++
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + EA  +  ++   G       Y  +I G C + +VD  +++   M+ +   PD  V+ T
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470

Query: 543 IVKKVADDGMTEEAYKLWQK 562
           +  ++   G +  A ++ ++
Sbjct: 471 LAAELCKSGRSARALEILRE 490



 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 227/452 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  +   ++      GKL DA  L   +      P      +LI GL   +  + A 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M   G  P  +TYN+++   CKRG +  A  L+ +M   G  PDV+TYNT++  +
Sbjct: 66  ELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G+ ++A+  + +  R GC P   ++  +I  +C+Q  I +A +V  +M      PD 
Sbjct: 126 CKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDS 185

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            +Y  L++   K GK ++A  +   +L  G+ P+++TYN ++H +      D   ++   
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P+ FT+NILI+  CK G +D A     +M      PD+VTY+T++  LC    
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +++A  LL  +    C P ++T NTLI GL K G +++A  +   M+ +G SPD +T+ T
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G CRA Q E A +LL ++  RG       Y  ++ GLCK+ ++  A  V   M SS 
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+   ++ ++      G  +   KL+ +++
Sbjct: 426 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMV 457



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 137/448 (30%), Positives = 221/448 (49%), Gaps = 2/448 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C RG L +A  LI  M     +PD      ++ GL +  R+E+A  +   M
Sbjct: 82  TYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRVEEALLLFNEM 141

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+  ++N ++ GLC++ +I  A  +  EM      PD  +Y  ++  +   GK 
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGILIDGLAKAGKL 201

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   ++  L  G  P  +TY ++I  +C    +  A+E+   M  +GC P   T+N L
Sbjct: 202 NEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+GK D+A  ++  +   G  P+ +TY+TL+  L S    D    +L+ M +   
Sbjct: 262 IDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            PTV T N LI+GLCK G +  A    + MVS    PD+VTYNT++   C+ G    A +
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +     +P ++TY  L+ GL K   + +A  ++ QM  +G +P+  T+  LI GFC
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 441

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL-ELMISSRYKP-D 536
            A QV+  + L  E+   G    +  Y  +   LCKS +   A+++L E   S R +   
Sbjct: 442 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGRSARALEILREGRESLRSEAWG 501

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           D V+   V  + D G  E A    + ++
Sbjct: 502 DEVYRFAVDGLLDAGKMEMALGFVRDMV 529



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 191/390 (48%), Gaps = 38/390 (9%)

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           ++E +VS   PD  +Y  ++  +   GK   A   ++  L  G  P  + YT LI  +C 
Sbjct: 1   MNERNVS---PDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCM 57

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
                 A E+  DM   GC P  VTYN +++ SCK+G  ++A  +I  ++  G  P+ +T
Sbjct: 58  ANSFDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117

Query: 330 YNTLLHSLGSRG-------CWDAVDKILDIMNEASHS----------------------- 359
           YNT++  L   G        ++ ++++    N  SH+                       
Sbjct: 118 YNTVMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 360 -----PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P  ++Y ILI+GL K G ++ A   F +M+     P  VTYN V+  +C    L+
Sbjct: 178 ARDIPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EAL+L   +    C P   T+N LID   K+G M++A  L  +M ++G  PD +T+ TLI
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C   +V++A  LL+++ KR  K        +IHGLCK+ ++  A +VL+ M+SS   
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           PD   ++T+V      G TE A +L   ++
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMV 387



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 91/307 (29%), Positives = 168/307 (54%)

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           +Y ILI+ + K   +  A ++   +   G +P  V Y SL++  C    +DDA  +  ++
Sbjct: 12  SYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             RG  P+ +TYN ++ +   RG  +    ++  M E  H P V TYN +++GLCK G V
Sbjct: 72  NRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSGRV 131

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + A+  FN+M    C P+  ++NT++  LC++  +++A Q+ H +      P   +Y  L
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARDIPPDSWSYGIL 191

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           IDGLAK G + +A  L+ +M+++GI+P  +T+  +I G C A  ++EA++L K +  +G 
Sbjct: 192 IDGLAKAGKLNEAYKLFRRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +     + ++I   CK  K+D A ++L+ M    + PD   +ST++  +      ++A  
Sbjct: 252 RPSRFTFNILIDAHCKRGKMDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311

Query: 559 LWQKLIE 565
           L + +++
Sbjct: 312 LLEDMVK 318



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 71/222 (31%), Positives = 123/222 (55%)

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           MNE + SP  ++Y ILI+GL K G ++ A + F +++     P  V Y +++  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARDLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            ++A +L   +N   C P  +TYN +ID   K+G +E+A  L  +M+E+G  PD +T+ T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVIIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++ G C++ +VEEA+ L  E+ + G      ++  +I GLC+  K+D A QV   M +  
Sbjct: 121 VMDGLCKSGRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEARD 180

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             PD   +  ++  +A  G   EAYKL++++++  +     T
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFRRMLDSGITPSAVT 222


>gi|15221674|ref|NP_176496.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169918|sp|Q9CAN5.1|PPR98_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63080, mitochondrial; Flags: Precursor
 gi|12323262|gb|AAG51614.1|AC010795_18 unknown protein; 41955-40111 [Arabidopsis thaliana]
 gi|332195930|gb|AEE34051.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 614

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 130/453 (28%), Positives = 242/453 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V ++  T N ++   C R +L+ A  ++  M +    P      +L+ G    +RI +A 
Sbjct: 96  VSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 155

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PDT+T+  +V GL +  +   A+AL++ M V GC+PD++TY  ++  +
Sbjct: 156 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 215

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A+       +      ++ Y+ +I+ +CK   +  A+ +  +M  +G  PD+
Sbjct: 216 CKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDV 275

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY+SL++  C  G++ DA  +++++L R + PN +T+N+L+ +    G     +K+ D 
Sbjct: 276 FTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDE 335

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M + S  P + TYN LING C +  +D A   F  MVSK+C PD+VTYNT++   CK   
Sbjct: 336 MIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKK 395

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + + ++L   ++        +TY TLI G  +    + A +++ QM+ +G+ P+ +T+ T
Sbjct: 396 VVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNT 455

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++E+A+ + + + K   +     Y ++  G+CK+ KV+    +   +    
Sbjct: 456 LLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKG 515

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KPD   ++T++      G+ EEAY L+ K+ E
Sbjct: 516 VKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKE 548



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 226/445 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L  FC   ++++A  L+D M      PD      L+ GL + ++  +A  +++ M
Sbjct: 137 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 196

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V+ G  PD +TY  ++ GLCKRG+   A+ LL++M     E DV+ Y+T++ ++      
Sbjct: 197 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHV 256

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+  + +   KG  P + TY+ LI  +C     + A  +L DM     +P++VT+NSL
Sbjct: 257 DDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSL 316

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK  +A  + + ++ R ++PN +TYN+L++        D   +I  +M     
Sbjct: 317 IDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDC 376

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TYN LING CK   V   +  F  M  +    + VTY T++    +    + A  
Sbjct: 377 LPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQM 436

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +      P ++TYNTL+DGL K G +EKAMV++  + ++ + PD  T+  +  G C
Sbjct: 437 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMC 496

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A +VE+  DL   +  +G K    AY  +I G CK    + A  +   M      PD  
Sbjct: 497 KAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSG 556

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++T+++    DG    + +L +++
Sbjct: 557 TYNTLIRAHLRDGDKAASAELIKEM 581



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 236/450 (52%), Gaps = 6/450 (1%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+ +N     KL +A  L   M +    P       L+  + ++ + +      + M + 
Sbjct: 35  KLSRNALLHLKLDEAVDLFGEMVKSRPFPSIVEFSKLLSAIAKMKKFDLVISFGEKMEIL 94

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   +  TYN+M+  LC+R Q+  A+A+L +M   G  P ++T N++L       +  +A
Sbjct: 95  GVSHNLYTYNIMINCLCRRSQLSFALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEA 154

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +      +  G  P  +T+T L+  + +    + A+ +++ M ++GC PD+VTY +++N 
Sbjct: 155 VALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVING 214

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS-- 359
            CK+G+ D A+ ++N +    +E + + Y+T++ SL     +  VD  L++  E  +   
Sbjct: 215 LCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCK---YRHVDDALNLFTEMDNKGI 271

Query: 360 -PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P VFTY+ LI+ LC YG    A    + M+ +   P++VT+N+++ A  KEG L EA +
Sbjct: 272 RPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEK 331

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +   S  P ++TYN+LI+G      +++A  ++  M+     PD +T+ TLI GFC
Sbjct: 332 LFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFC 391

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A +V + ++L +++ +RG       Y  +IHG  ++   D A  V + M+S    P+  
Sbjct: 392 KAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIM 451

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            ++T++  +  +G  E+A  +++ L + K+
Sbjct: 452 TYNTLLDGLCKNGKLEKAMVVFEYLQKSKM 481



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 183/378 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C RG+   A  L++ M +     D      +I  L +   ++ A  + 
Sbjct: 204 DLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYSTVIDSLCKYRHVDDALNLF 263

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD  TY+ ++  LC  G+   A  LL +M      P+V+T+N+++      
Sbjct: 264 TEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMLERKINPNVVTFNSLIDAFAKE 323

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A   + + +++   P ++TY  LI   C    +  A ++   M  + C PD+VTY
Sbjct: 324 GKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLMVSKDCLPDVVTY 383

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  CK  K  D + +  ++  RG+  N++TY TL+H        D    +   M  
Sbjct: 384 NTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDCDNAQMVFKQMVS 443

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN L++GLCK G +++A+  F  +     +PDI TYN +   +CK G + +
Sbjct: 444 DGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIMSEGMCKAGKVED 503

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
              L   L+     P +I YNT+I G  KKG  E+A  L+ +M E+G  PD  T+ TLI 
Sbjct: 504 GWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGPLPDSGTYNTLIR 563

Query: 476 GFCRADQVEEAVDLLKEI 493
              R      + +L+KE+
Sbjct: 564 AHLRDGDKAASAELIKEM 581



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 172/358 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    + ++ + C    + DA  L   M  +   PD     +LI  L    R   AS
Sbjct: 236 IEADVVIYSTVIDSLCKYRHVDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 295

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+     P+ +T+N ++    K G++  A  L DEM     +P+++TYN+++   
Sbjct: 296 RLLSDMLERKINPNVVTFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGF 355

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   +   + K C P ++TY  LI   CK   +   +E+  DM+  G   + 
Sbjct: 356 CMHDRLDEAQQIFTLMVSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNT 415

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY +L++   +    D+A +V   ++S G+ PN +TYNTLL  L   G  +    + + 
Sbjct: 416 VTYTTLIHGFFQASDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEY 475

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + ++   P ++TYNI+  G+CK G V+   + F  +  K  +PD++ YNT++   CK+G+
Sbjct: 476 LQKSKMEPDIYTYNIMSEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGL 535

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             EA  L   +      P   TYNTLI    + G    +  L  +M     + D  T+
Sbjct: 536 KEEAYTLFIKMKEDGPLPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTY 593



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/299 (28%), Positives = 141/299 (47%), Gaps = 1/299 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  F   GKL +A KL D M +R+  P+     +LI G    DR+++A ++  +M
Sbjct: 312 TFNSLIDAFAKEGKLIEAEKLFDEMIQRSIDPNIVTYNSLINGFCMHDRLDEAQQIFTLM 371

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V    +PD +TYN ++ G CK  ++   + L  +MS  G   + +TY T++   F     
Sbjct: 372 VSKDCLPDVVTYNTLINGFCKAKKVVDGMELFRDMSRRGLVGNTVTYTTLIHGFFQASDC 431

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   +K  +  G  P ++TY  L++ +CK   + +A+ V + +      PDI TYN +
Sbjct: 432 DNAQMVFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQKSKMEPDIYTYNIM 491

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
               CK GK +D   +  +L  +G++P+ I YNT++     +G  +    +   M E   
Sbjct: 492 SEGMCKAGKVEDGWDLFCSLSLKGVKPDVIAYNTMISGFCKKGLKEEAYTLFIKMKEDGP 551

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            P   TYN LI    + G    +     +M S     D  TY  V   L  +G L++  
Sbjct: 552 LPDSGTYNTLIRAHLRDGDKAASAELIKEMRSCRFAGDASTYGLVTDML-HDGRLDKGF 609


>gi|15221691|ref|NP_176501.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169915|sp|Q9CAN0.1|PPR99_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63130, mitochondrial; Flags: Precursor
 gi|12323261|gb|AAG51613.1|AC010795_17 unknown protein; 64081-65973 [Arabidopsis thaliana]
 gi|22136016|gb|AAM91590.1| unknown protein [Arabidopsis thaliana]
 gi|23197834|gb|AAN15444.1| unknown protein [Arabidopsis thaliana]
 gi|332195938|gb|AEE34059.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 630

 Score =  241 bits (616), Expect = 6e-61,   Method: Compositional matrix adjust.
 Identities = 149/560 (26%), Positives = 279/560 (49%), Gaps = 37/560 (6%)

Query: 18  PNLQWCSRQVSLQHGVVNNHRTQFYSQLRDLGAGRNVSL-----KCRGLPGNV------- 65
           P+   CS  V    GV  ++R    ++L DL     V+L     K R  P  V       
Sbjct: 30  PSFSHCSFWVRDFSGVRYDYRKISINRLNDLKLDDAVNLFGDMVKSRPFPSIVEFSKLLS 89

Query: 66  CIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQ 125
            I ++N+ D         V+++ ++++ L I+   +  S+                 ++ 
Sbjct: 90  AIAKMNKFDL--------VISLGEQMQNLGISHNLYTYSI-----------------LIN 124

Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
            FC R +L+ A  ++  M +    PD     +L+ G    +RI  A  ++  MV  G  P
Sbjct: 125 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQP 184

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D+ T+N ++ GL +  +   A+AL+D M V GC+PD++TY  ++  +   G    A+   
Sbjct: 185 DSFTFNTLIHGLFRHNRASEAVALVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLL 244

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           K   +    P ++ Y  +I+ +C    +  A+ +  +M  +G  P++VTYNSL+   C  
Sbjct: 245 KKMEQGKIEPGVVIYNTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNY 304

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G++ DA  ++++++ R + PN +T++ L+ +    G     +K+ D M + S  P +FTY
Sbjct: 305 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTY 364

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           + LING C +  +D A + F  M+SK+C P++VTYNT++   CK   ++E ++L   ++ 
Sbjct: 365 SSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQ 424

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
                  +TY TLI G  +    + A +++ QM+ +G+ PD +T+  L+ G C   +VE 
Sbjct: 425 RGLVGNTVTYTTLIHGFFQARECDNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVET 484

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+ + + + +   +     Y ++I G+CK+ KV+    +   +     KP+   ++T++ 
Sbjct: 485 ALVVFEYLQRSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMS 544

Query: 546 KVADDGMTEEAYKLWQKLIE 565
                G+ EEA  L++++ E
Sbjct: 545 GFCRKGLKEEADALFREMKE 564



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 226/479 (47%), Gaps = 36/479 (7%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N +L  FC   +++DA  L+  M      PD      LI GL R +R  +A  
Sbjct: 148 EPDIVTLNSLLNGFCHGNRISDAVSLVGQMVEMGYQPDSFTFNTLIHGLFRHNRASEAVA 207

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV+ G  PD +TY ++V GLCKRG I  A++LL +M     EP V+ YNTI+  + 
Sbjct: 208 LVDRMVVKGCQPDLVTYGIVVNGLCKRGDIDLALSLLKKMEQGKIEPGVVIYNTIIDALC 267

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +      A+  + +   KG  P ++TY  LI  +C     + A  +L DM     +P++V
Sbjct: 268 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 327

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+++L++   K+GK  +A  + + ++ R ++P+  TY++L++        D    + ++M
Sbjct: 328 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 387

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAIN------------------------------ 383
                 P V TYN LI G CK   VD  +                               
Sbjct: 388 ISKDCFPNVVTYNTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIHGFFQAREC 447

Query: 384 -----SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
                 F QMVS    PDI+TY+ +L  LC  G +  AL +   L  S   P + TYN +
Sbjct: 448 DNAQIVFKQMVSDGVLPDIMTYSILLDGLCNNGKVETALVVFEYLQRSKMEPDIYTYNIM 507

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I+G+ K G +E    L+  +   G+ P+ +T+ T++ GFCR    EEA  L +E+ + G 
Sbjct: 508 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFREMKEEGP 567

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
              +  Y  +I    +      + +++  M S R+  D +    +V  +  DG  ++++
Sbjct: 568 LPDSGTYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTIG-LVTNMLHDGRLDKSF 625


>gi|302781560|ref|XP_002972554.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
 gi|300160021|gb|EFJ26640.1| hypothetical protein SELMODRAFT_97435 [Selaginella moellendorffii]
          Length = 581

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 141/449 (31%), Positives = 238/449 (53%), Gaps = 9/449 (2%)

Query: 121 NKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +LQ+ C  G+   A ++    MAR    P       +I GL + + +    ++ + +V
Sbjct: 49  NIVLQSLCRAGETARALEIFRGEMARDGVAPTIVTYNTIINGLCKSNELGAGMELFEELV 108

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  PD +TYN ++  LCK G +  A  L   MS  GC P+V+TY+ ++  +   G+  
Sbjct: 109 KRGHHPDVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTYSVLINGLCKVGRID 168

Query: 240 QAIGFWKDQLRKGCP--PYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPDIVT 294
           +A    ++  RK C   P +ITY   ++ +CKQ   A A E+   L D ++   SPD VT
Sbjct: 169 EARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLR-VSPDTVT 227

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +++L++  CK G+ D+A    +++++ G  PN +TYN L++ L      +    +++ M 
Sbjct: 228 FSTLIDGLCKCGQTDEAC--NDDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESMV 285

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +   +P V TY++L++  CK   VD A+   + M S+ C P++VT+N+++  LCK     
Sbjct: 286 DKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRSG 345

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA Q+   +      P  +T+N LI G  K G  E+A  L+ +M+   + PD +T   LI
Sbjct: 346 EAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGALI 405

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+A QVE A D+L  +G  G       Y +++HGLCKS +++   + LE M+SS   
Sbjct: 406 DGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGCV 465

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           P+   + ++V  +     T++A +L  KL
Sbjct: 466 PESMTYGSLVYALCRASRTDDALQLVSKL 494



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 141/484 (29%), Positives = 249/484 (51%), Gaps = 20/484 (4%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           + K+ H P            D  T N ++ + C  G L +A +L   M+ R  +P+    
Sbjct: 107 LVKRGHHP------------DVVTYNTLIDSLCKAGDLEEARRLHGGMSSRGCVPNVVTY 154

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
             LI GL ++ RI++A +++Q M       +P+ ITYN  + GLCK+     A  L+  +
Sbjct: 155 SVLINGLCKVGRIDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSL 214

Query: 214 SVSG--CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
                   PD +T++T++  +   G+  +A     D +  G  P ++TY  L+  +CK  
Sbjct: 215 RDGSLRVSPDTVTFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKAD 272

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            + RA  +++ M  +G +PD++TY+ LV+  CK  + D+A+ +++ + SRG  PN +T+N
Sbjct: 273 KMERAHAMIESMVDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFN 332

Query: 332 TLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           +++  L  S    +A    L + N     P   T+NILI G CK G  ++A   F +MV+
Sbjct: 333 SIIDGLCKSDRSGEAFQIALQVYNRM-LVPDKVTFNILIAGACKAGNFEQASALFEEMVA 391

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           KN QPD++T+  ++  LCK G +  A  +L L+      P ++TYN L+ GL K G +E+
Sbjct: 392 KNMQPDVMTFGALIDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEE 451

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
                 +M+ +G  P+ +T+ +L++  CRA + ++A+ L+ ++   G       Y +++ 
Sbjct: 452 PCEFLEEMVSSGCVPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVD 511

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFE 570
           GL KS K + AI VLE M+   ++PD   F+     +   G      +L + ++   +  
Sbjct: 512 GLWKSGKTEQAITVLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLP 571

Query: 571 KGTT 574
             TT
Sbjct: 572 DATT 575



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 196/417 (47%), Gaps = 45/417 (10%)

Query: 67  IDRVNEVDQDEWSSESHVL----AVNKKLRGL---TITKKSHDPSLPSSDGPF-VENDEK 118
           ID   E+ Q+       VL      N  L GL   ++T ++ +      DG   V  D  
Sbjct: 167 IDEARELIQEMTRKSCDVLPNIITYNSFLDGLCKQSMTAEACELMRSLRDGSLRVSPDTV 226

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C  G+  +A    D M     +P+      L+ GL + D++E+A  +++ M
Sbjct: 227 TFSTLIDGLCKCGQTDEACN--DDMIAGGYVPNVVTYNALVNGLCKADKMERAHAMIESM 284

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL--------- 229
           V  G  PD ITY+++V   CK  ++  A+ LL  M+  GC P+V+T+N+I+         
Sbjct: 285 VDKGVTPDVITYSVLVDAFCKASRVDEALELLHGMASRGCTPNVVTFNSIIDGLCKSDRS 344

Query: 230 ------------------RTMFD--------NGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                             +  F+         G F+QA   +++ + K   P ++T+  L
Sbjct: 345 GEAFQIALQVYNRMLVPDKVTFNILIAGACKAGNFEQASALFEEMVAKNMQPDVMTFGAL 404

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+ +CK   +  A ++LD M   G  P++VTYN LV+  CK G+ ++    +  ++S G 
Sbjct: 405 IDGLCKAGQVEAARDILDLMGNLGVPPNVVTYNVLVHGLCKSGRIEEPCEFLEEMVSSGC 464

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P S+TY +L+++L      D   +++  +      P   TYNIL++GL K G  ++AI 
Sbjct: 465 VPESMTYGSLVYALCRASRTDDALQLVSKLKSFGWDPDTVTYNILVDGLWKSGKTEQAIT 524

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
              +MV K  QPD  T+    G L + G L   ++LL ++      P   T ++++D
Sbjct: 525 VLEEMVGKGHQPDSFTFAACFGGLHRSGNLAGTMELLRVVLAKGMLPDATTCSSILD 581


>gi|147788022|emb|CAN69338.1| hypothetical protein VITISV_032632 [Vitis vinifera]
          Length = 585

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 233/454 (51%), Gaps = 4/454 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N ++ +FC   +   A  ++  + +    PD      LIRGL    +I  A 
Sbjct: 98  IPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDAL 157

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M+  G  P+ +TY  ++ GLCK G   +AI LL  M    C+PDV+ Y +I+ ++
Sbjct: 158 HLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSL 217

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   +   + +G  P + TYT LI  +C  C       +L+ M      PD+
Sbjct: 218 CKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDV 277

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL--HSLGSRGCWDAVDKIL 350
           V ++++V+  CK+GK  +A  V++ ++ RG+EPN +TYN L+  H L S    D   K+ 
Sbjct: 278 VIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE--MDEAVKVF 335

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           D M    ++P V +YN LING CK   +D+A   F +M  K   P+ VTYNT++  LC  
Sbjct: 336 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHV 395

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G L +A+ L H +      P L TY  L+D L KK  +++AM L   +  + + PD   +
Sbjct: 396 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 455

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             +I G CRA ++E A D+   +  +G +     Y ++I+GLC+   +D A ++   M  
Sbjct: 456 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 515

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +   PD   ++TI + +  +     A +L Q+++
Sbjct: 516 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 549



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 231/453 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T   +++  C  GK+ DA  L D M      P+      LI GL ++     A 
Sbjct: 133 LQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAI 192

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L+ M      PD + Y  ++  LCK  Q+  A  L  +M   G  PD+ TY +++ ++
Sbjct: 193 RLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSL 252

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            +  ++K         +     P ++ ++ +++ +CK+  I  A +V+D M I G  P++
Sbjct: 253 CNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNV 312

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L++  C Q + D+AV V + ++  G  PN I+YNTL++        D    + + 
Sbjct: 313 VTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEE 372

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +    P   TYN L++GLC  G +  AI  F++MV+    PD+ TY  +L  LCK+  
Sbjct: 373 MCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSH 432

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EA+ LL  + GS+  P +  Y  +IDG+ + G +E A  ++  +   G+ P+  T+  
Sbjct: 433 LDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTI 492

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G CR   ++EA  L  E+   G       Y  +  GL ++K+   AIQ+L+ M++  
Sbjct: 493 MINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEMLARG 552

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +  D +  + +V+ + DD + +   ++  + ++
Sbjct: 553 FSADVSTTTLLVEMLCDDKLDQSVKQILSEFVQ 585



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 106/414 (25%), Positives = 204/414 (49%), Gaps = 35/414 (8%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN------------------ 226
           P T+ +N ++  + K  Q  +  +L ++M   G  PDV T N                  
Sbjct: 65  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRPGFAFSV 124

Query: 227 -----------------TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
                            T++R +   GK   A+  +   + +G  P ++TY  LI  +CK
Sbjct: 125 LAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 184

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
                 AI +L  M    C PD+V Y S+++  CK  +  +A  + + ++ +G+ P+  T
Sbjct: 185 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 244

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y +L+HSL +   W  V  +L+ M  +   P V  ++ +++ LCK G +  A +  + M+
Sbjct: 245 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +  +P++VTYN ++   C +  ++EA+++   +  +  +P +I+YNTLI+G  K   M+
Sbjct: 305 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 364

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KA  L+ +M +  + P+ +T+ TL+ G C   ++++A+ L  E+   G     + YR+++
Sbjct: 365 KATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQIPDLATYRILL 424

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             LCK   +D A+ +L+ +  S   PD  +++ ++  +   G  E A  ++  L
Sbjct: 425 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNL 478



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 89/334 (26%), Positives = 156/334 (46%)

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +   L    PP  + +  L+  + K         + + M   G  PD+ T N L+N
Sbjct: 51  ALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILIN 110

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C   +   A  V+  +L  G++P++ T+ TL+  L   G       + D M      P
Sbjct: 111 SFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQP 170

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY  LINGLCK G  + AI     M   NCQPD+V Y +++ +LCK+  + EA  L 
Sbjct: 171 NVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLF 230

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             + G   SP + TY +LI  L      +    L  QM+ + I PD +   T++   C+ 
Sbjct: 231 SKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKE 290

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++ EA D++  +  RG +     Y  ++ G C   ++D A++V + M+ + Y P+   +
Sbjct: 291 GKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISY 350

Query: 541 STIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +T++         ++A  L++++ + ++     T
Sbjct: 351 NTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 384



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 162/333 (48%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T   ++ + C+  +    + L++ M     +PD      ++  L +  +I 
Sbjct: 235 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 294

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A  V+ +M++ G  P+ +TYN ++ G C + ++  A+ + D M  +G  P+VI+YNT++
Sbjct: 295 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 354

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                  +  +A   +++  +K   P  +TY  L+  +C    +  AI +  +M   G  
Sbjct: 355 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHGLCHVGRLQDAIALFHEMVAHGQI 414

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD+ TY  L+++ CK+   D+A+ ++  +    M+P+   Y  ++  +   G  +A   I
Sbjct: 415 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 474

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              ++     P V TY I+INGLC+ GL+D A   F +M    C PD  TYNT+   L +
Sbjct: 475 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 534

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                 A+QLL  +     S  + T   L++ L
Sbjct: 535 NKEALRAIQLLQEMLARGFSADVSTTTLLVEML 567



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 79/272 (29%), Positives = 131/272 (48%)

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +++N   + S      DDA+   N +L     P+++ +N LL S+     +  V  + + 
Sbjct: 33  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 92

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+     P V+T NILIN  C       A +   +++    QPD  T+ T++  LC EG 
Sbjct: 93  MDSFGIPPDVYTLNILINSFCHLNRPGFAFSVLAKILKLGLQPDTATFTTLIRGLCVEGK 152

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +AL L   + G    P ++TY TLI+GL K G    A+ L   M +    PD + + +
Sbjct: 153 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 212

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I   C+  QV EA +L  ++  +G       Y  +IH LC   +      +L  MI+S+
Sbjct: 213 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 272

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             PD  +FST+V  +  +G   EA+ +   +I
Sbjct: 273 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 304



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 5/149 (3%)

Query: 98  KKSH-DPS---LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH 153
           KKSH D +   L + +G  ++ D +    ++   C  G+L  A  +   ++ +   P+  
Sbjct: 429 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVR 488

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
               +I GL R   +++A+K+   M  +G  PD  TYN +  GL +  +   AI LL EM
Sbjct: 489 TYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 548

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              G   DV T  T+L  M  + K  Q++
Sbjct: 549 LARGFSADVST-TTLLVEMLCDDKLDQSV 576


>gi|225427482|ref|XP_002263209.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 592

 Score =  241 bits (615), Expect = 8e-61,   Method: Compositional matrix adjust.
 Identities = 141/471 (29%), Positives = 241/471 (51%), Gaps = 8/471 (1%)

Query: 94  LTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH 153
           L+++K+     +PS        D  T   ++ +FC   ++     ++  + +    PD  
Sbjct: 94  LSLSKQMDSLGIPS--------DVYTLAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTA 145

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
               LIRGL    +I +A  +   MV  G  P+ +TY  ++ GLCK G  R+AI LL  M
Sbjct: 146 TFTTLIRGLCVEGKIGEALHLFDKMVGEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSM 205

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
               CEP+VITYNTI+  +F + +  +A+  + + + KG  P + TY  +I  +CK    
Sbjct: 206 VQKNCEPNVITYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEW 265

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
                ++++M      P++V + +LV+  CK+G    A  V++ ++ RG+EP+ +TY  L
Sbjct: 266 KHVATLMNEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTAL 325

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +     R   D  DK+ D M     +P V +Y+ LING CK   +D+A+  F +M  +  
Sbjct: 326 MDGHCLRSEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQREL 385

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P+IVTYNT++  LC  G L +A+ L H +  S   P L+TY  L+D L K   +++AM 
Sbjct: 386 VPNIVTYNTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMA 445

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +   +  + ++PD  ++  +I G CR  ++E A DL   +  +G       Y ++I+GLC
Sbjct: 446 MLKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLC 505

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               +  A ++   M +    PDD  ++ I +    +  T  A +L Q+++
Sbjct: 506 LQGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEML 556



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 188/369 (50%), Gaps = 1/369 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+       ++ +A  +   M  +   P+     ++I GL +    +  + ++  M
Sbjct: 216 TYNTIIDCLFKDRQVNEALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEM 275

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V S  +P+ + +  +V  LCK G +  A  ++D M   G EPDV+TY  ++       + 
Sbjct: 276 VDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEM 335

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +   +RKGC P +I+Y+ LI   CK   I +A+ + ++M      P+IVTYN+L
Sbjct: 336 DEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTL 395

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  G+  DA+ + + +++ G  P+ +TY  LL  L      D    +L  +  ++ 
Sbjct: 396 IHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLKAIEGSNL 455

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P + +YNI+I+G+C+ G ++ A + F+ + SK   PD+ TY  ++  LC +G+L EA +
Sbjct: 456 APDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLLAEATK 515

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +N   CSP   TYN +  G  +      A+ L  +M+  G S D  T  TLI    
Sbjct: 516 LFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADAST-ITLIVEML 574

Query: 479 RADQVEEAV 487
             D ++++V
Sbjct: 575 SDDGLDQSV 583



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 94/362 (25%), Positives = 180/362 (49%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           I  A++  + M      P V+ +  IL ++ +   +   +   K     G P  + T  I
Sbjct: 55  IDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYTLAI 114

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           +I   C    +     VL  +   G  PD  T+ +L+   C +GK  +A+ + + ++  G
Sbjct: 115 VINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMVGEG 174

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +PN +TY TL+H L   G   A  ++L  M + +  P V TYN +I+ L K   V+ A+
Sbjct: 175 FQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVNEAL 234

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           N F++M++K   P++ TYN+++  LCK         L++ +  S   P ++ + TL+D L
Sbjct: 235 NIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLVDAL 294

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+G +  A  +   M++ G+ PD +T+  L+ G C   +++EA  +   + ++G     
Sbjct: 295 CKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLRSEMDEADKVFDTMVRKGCAPNV 354

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            +Y  +I+G CK +++D A+ + E M      P+   ++T++  +   G   +A  L+ +
Sbjct: 355 ISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTYNTLIHGLCHVGRLRDAIALFHE 414

Query: 563 LI 564
           ++
Sbjct: 415 MV 416



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 90/318 (28%), Positives = 160/318 (50%), Gaps = 14/318 (4%)

Query: 116 DEKTNNKILQN----------FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRI 165
           +E  ++KI+ N           C  G +T A  ++D+M +R   PD      L+ G    
Sbjct: 273 NEMVDSKIMPNVVIFTTLVDALCKEGMVTIAHDVVDVMIQRGVEPDVVTYTALMDGHCLR 332

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
             +++A KV   MV  G  P+ I+Y+ ++ G CK  +I  A+ L +EM      P+++TY
Sbjct: 333 SEMDEADKVFDTMVRKGCAPNVISYSTLINGYCKIQRIDKAMYLFEEMCQRELVPNIVTY 392

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           NT++  +   G+ + AI  + + +  G  P L+TY IL++ +CK   + +A+ +L   AI
Sbjct: 393 NTLIHGLCHVGRLRDAIALFHEMVASGQIPDLVTYRILLDYLCKTRHLDQAMAMLK--AI 450

Query: 286 EGC--SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
           EG   +PDI +YN +++  C+ G+ + A  + ++L S+G+ P+  TY  +++ L  +G  
Sbjct: 451 EGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCLQGLL 510

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
               K+   MN    SP   TYN++  G  +      AI    +M+ +    D  T   +
Sbjct: 511 AEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADASTITLI 570

Query: 404 LGALCKEGMLNEALQLLH 421
           +  L  +G+     Q+LH
Sbjct: 571 VEMLSDDGLDQSVKQILH 588



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 58/264 (21%), Positives = 109/264 (41%), Gaps = 38/264 (14%)

Query: 343 WDAVDKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
           ++ +D+ L   N   H    P+V  +  ++  +         ++   QM S     D+ T
Sbjct: 52  FNTIDEALSSFNRMLHMQPPPSVVDFAKILTSIANMKHYSTVLSLSKQMDSLGIPSDVYT 111

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
              V+ + C    ++    +L  +      P   T+ TLI GL  +G + +A+ L+ +M+
Sbjct: 112 LAIVINSFCHLNRVDFGFSVLAKIFKLGHQPDTATFTTLIRGLCVEGKIGEALHLFDKMV 171

Query: 460 ENGISPDDITHRTLIWGFCRAD-----------------------------------QVE 484
             G  P+ +T+ TLI G C+                                     QV 
Sbjct: 172 GEGFQPNGVTYGTLIHGLCKVGNSRAAIRLLRSMVQKNCEPNVITYNTIIDCLFKDRQVN 231

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA+++  E+  +G     S Y  +IHGLCK  +      ++  M+ S+  P+  +F+T+V
Sbjct: 232 EALNIFSEMIAKGISPNVSTYNSIIHGLCKFSEWKHVATLMNEMVDSKIMPNVVIFTTLV 291

Query: 545 KKVADDGMTEEAYKLWQKLIEWKV 568
             +  +GM   A+ +   +I+  V
Sbjct: 292 DALCKEGMVTIAHDVVDVMIQRGV 315



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 37/132 (28%), Positives = 61/132 (46%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L + +G  +  D ++ N ++   C  G+L  A  L   ++ +   PD      +I GL  
Sbjct: 447 LKAIEGSNLAPDIQSYNIVIDGMCRVGELEAAGDLFSSLSSKGLHPDVWTYTIMINGLCL 506

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
              + +A+K+ + M   G  PD  TYN++  G  +  +  SAI LL EM   G   D  T
Sbjct: 507 QGLLAEATKLFREMNTDGCSPDDCTYNLITRGFLRNNETLSAIQLLQEMLGRGFSADAST 566

Query: 225 YNTILRTMFDNG 236
              I+  + D+G
Sbjct: 567 ITLIVEMLSDDG 578


>gi|302775582|ref|XP_002971208.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
 gi|300161190|gb|EFJ27806.1| hypothetical protein SELMODRAFT_94745 [Selaginella moellendorffii]
          Length = 599

 Score =  241 bits (614), Expect = 9e-61,   Method: Compositional matrix adjust.
 Identities = 134/453 (29%), Positives = 232/453 (51%), Gaps = 4/453 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C   ++ +A  L + M R    P+      +I GL +  +I++A +V 
Sbjct: 114 DVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVF 173

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M      PD+ +Y +++ GL K G++  A  L   M  SG  P  +TYN ++  M   
Sbjct: 174 HEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLA 233

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A+  +K    KGC P   T+ ILI+  CK+  +  A  +L  M  +G  PD+VTY
Sbjct: 234 YTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTY 293

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  C   + DDA  ++ +++ R  +P  +T NTL+H L   G      ++LD M  
Sbjct: 294 STLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVS 353

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +  SP V TYN L++G C+ G  +RA    + MV++   P++VTY  ++  LCK   L E
Sbjct: 354 SGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPE 413

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  +   +  S C+P L TY  LI G    G ++  + L+G+M+  GISPD + + TL  
Sbjct: 414 ACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGTLAA 473

Query: 476 GFCRADQVEEAVDLLKEIGK---RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
             C++ +   A+++L+E G+   R     +  YR  + GL ++ K++MA+  +  M+   
Sbjct: 474 ELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLEAGKMEMALGFVRDMVRGG 532

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             P     +++V  +   G   EA  + +++++
Sbjct: 533 QLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 565



 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 131/440 (29%), Positives = 227/440 (51%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C      DA +L   M RR   P       +I    +   +E+A  +++ M+  G
Sbjct: 51  LIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDG 110

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD +TYN ++ GLCK  ++  A+ L +EM   GC P+  ++NTI+  +    K  QA 
Sbjct: 111 HVPDVVTYNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQAC 170

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   K  PP   +Y ILI+ + K   +  A ++   M   G +P  VTYN +++  
Sbjct: 171 QVFHEMEAKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGM 230

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C     D+A+ +  ++ S+G  P+  T+N L+ +   RG  D   ++L  M +  H P V
Sbjct: 231 CLAYTLDEALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDV 290

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ LI+GLC    VD A +    MV + C+P +VT NT++  LCK G + EA ++L  
Sbjct: 291 VTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDA 350

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  S  SP ++TYNTL+ G  + G  E+A  L   M+  G++P+ +T+  L+ G C+A++
Sbjct: 351 MVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANR 410

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + EA  +  ++   G       Y  +I G C + +VD  +++   M+ +   PD  V+ T
Sbjct: 411 LPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGISPDHVVYGT 470

Query: 543 IVKKVADDGMTEEAYKLWQK 562
           +  ++   G +  A ++ ++
Sbjct: 471 LAAELCKSGRSARALEILRE 490



 Score =  238 bits (606), Expect = 9e-60,   Method: Compositional matrix adjust.
 Identities = 134/452 (29%), Positives = 227/452 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  +   ++      GKL DA  L   +      P      +LI GL   +  + A 
Sbjct: 6   VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 65

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M   G  P  +TYN+M+   CKRG +  A  L+ +M   G  PDV+TYNT++  +
Sbjct: 66  ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 125

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + + ++A+  + +  R GC P   ++  +I  +C+Q  I +A +V  +M  +   PD 
Sbjct: 126 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDS 185

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            +Y  L++   K GK ++A  +   +L  G+ P+++TYN ++H +      D   ++   
Sbjct: 186 WSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKS 245

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P+ FT+NILI+  CK G +D A     +M      PD+VTY+T++  LC    
Sbjct: 246 MRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIAR 305

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +++A  LL  +    C P ++T NTLI GL K G +++A  +   M+ +G SPD +T+ T
Sbjct: 306 VDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNT 365

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G CRA Q E A +LL ++  RG       Y  ++ GLCK+ ++  A  V   M SS 
Sbjct: 366 LVHGHCRAGQTERARELLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSG 425

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+   ++ ++      G  +   KL+ +++
Sbjct: 426 CAPNLFTYTALILGFCSAGQVDGGLKLFGEMV 457



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/436 (30%), Positives = 215/436 (49%), Gaps = 3/436 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C RG L +A  LI  M     +PD      ++ GL +  R+E+A  +   M
Sbjct: 82  TYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 141

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+  ++N ++ GLC++ +I  A  +  EM      PD  +Y  ++  +   GK 
Sbjct: 142 ERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGILIDGLAKAGKL 201

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   ++  L  G  P  +TY ++I  +C    +  A+E+   M  +GC P   T+N L
Sbjct: 202 NEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGCRPSRFTFNIL 261

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+GK D+A  ++  +   G  P+ +TY+TL+  L S    D    +L+ M +   
Sbjct: 262 IDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQC 321

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            PTV T N LI+GLCK G +  A    + MVS    PD+VTYNT++   C+ G    A +
Sbjct: 322 KPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARE 381

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +     +P ++TY  L+ GL K   + +A  ++ QM  +G +P+  T+  LI GFC
Sbjct: 382 LLSDMVARGLAPNVVTYTALVSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFC 441

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
            A QV+  + L  E+   G    +  Y  +   LCKS +   + + LE++   R      
Sbjct: 442 SAGQVDGGLKLFGEMVCAGISPDHVVYGTLAAELCKSGR---SARALEILREGRESLRSE 498

Query: 539 VFSTIVKKVADDGMTE 554
            +   V + A DG+ E
Sbjct: 499 AWGDEVYRFAVDGLLE 514



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 120/390 (30%), Positives = 190/390 (48%), Gaps = 38/390 (9%)

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           ++E +VS   PD  +Y  ++  +   GK   A   ++  L  G  P  + YT LI  +C 
Sbjct: 1   MNERNVS---PDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCM 57

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
                 A E+  DM   GC P  VTYN +++ SCK+G  ++A  +I  ++  G  P+ +T
Sbjct: 58  ANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 117

Query: 330 YNTLLHSL--GSR--------------GC----------------WDAVDKILDIMNEAS 357
           YNT++  L   SR              GC                   +D+   + +E  
Sbjct: 118 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEME 177

Query: 358 HS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P  ++Y ILI+GL K G ++ A   F +M+     P  VTYN V+  +C    L+
Sbjct: 178 AKDIPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLD 237

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EAL+L   +    C P   T+N LID   K+G +++A  L  +M ++G  PD +T+ TLI
Sbjct: 238 EALELFKSMRSKGCRPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLI 297

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C   +V++A  LL+++ KR  K        +IHGLCK+ ++  A +VL+ M+SS   
Sbjct: 298 SGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRIKEAREVLDAMVSSGQS 357

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           PD   ++T+V      G TE A +L   ++
Sbjct: 358 PDVVTYNTLVHGHCRAGQTERARELLSDMV 387



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 90/307 (29%), Positives = 166/307 (54%)

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           +Y ILI+ + K   +  A  +   +   G +P  V Y SL++  C    +DDA  +  ++
Sbjct: 12  SYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDARELFADM 71

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             RG  P+ +TYN ++ +   RG  +    ++  M E  H P V TYN +++GLCK   V
Sbjct: 72  NRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRV 131

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + A+  FN+M    C P+  ++NT++  LC++  +++A Q+ H +      P   +Y  L
Sbjct: 132 EEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKDIPPDSWSYGIL 191

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           IDGLAK G + +A  L+ +M+++GI+P  +T+  +I G C A  ++EA++L K +  +G 
Sbjct: 192 IDGLAKAGKLNEAYKLFQRMLDSGITPSAVTYNVVIHGMCLAYTLDEALELFKSMRSKGC 251

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +     + ++I   CK  K+D A ++L+ M    + PD   +ST++  +      ++A  
Sbjct: 252 RPSRFTFNILIDAHCKRGKLDEAFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARH 311

Query: 559 LWQKLIE 565
           L + +++
Sbjct: 312 LLEDMVK 318



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 73/222 (32%), Positives = 123/222 (55%)

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           MNE + SP  ++Y ILI+GL K G ++ A N F +++     P  V Y +++  LC    
Sbjct: 1   MNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANS 60

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            ++A +L   +N   C P  +TYN +ID   K+G +E+A  L  +M+E+G  PD +T+ T
Sbjct: 61  FDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNT 120

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++ G C++ +VEEA+ L  E+ + G      ++  +I GLC+  K+D A QV   M +  
Sbjct: 121 VMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQVFHEMEAKD 180

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             PD   +  ++  +A  G   EAYKL+Q++++  +     T
Sbjct: 181 IPPDSWSYGILIDGLAKAGKLNEAYKLFQRMLDSGITPSAVT 222


>gi|8493580|gb|AAF75803.1|AC011000_6 Contains weak similarity to leaf protein from Ipomea nil gb|D85101
           and contains a RepB PF|01051 protein and multiple PPR
           PF|01535 repeats [Arabidopsis thaliana]
          Length = 613

 Score =  240 bits (613), Expect = 1e-60,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 242/453 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  + N ++  FC R +L  A  ++  M +    PD     +L+ G     RI +A 
Sbjct: 95  ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 154

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M +    P+T+T+N ++ GL    +   A+AL+D M   GC+PD+ TY T++  +
Sbjct: 155 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 214

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+   K   +      ++ YT +I+ +C    +  A+ +  +M  +G  P++
Sbjct: 215 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 274

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYNSL+   C  G++ DA  ++++++ R + PN +T++ L+ +    G     +K+ D 
Sbjct: 275 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 334

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M + S  P +FTY+ LING C +  +D A + F  M+SK+C P++VTYNT++   CK   
Sbjct: 335 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 394

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + E ++L   ++        +TYNTLI GL + G  + A  ++ +M+ +G+ PD IT+  
Sbjct: 395 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 454

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++E+A+ + + + K   +     Y ++I G+CK+ KV+    +   +    
Sbjct: 455 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 514

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KP+  +++T++      G+ EEA  L++++ E
Sbjct: 515 VKPNVIIYTTMISGFCRKGLKEEADALFREMKE 547



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 226/450 (50%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + +L  +C   ++++A  L+D M      P+      LI GL   ++  +A  
Sbjct: 131 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 190

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  PD  TY  +V GLCKRG I  A++LL +M     E DV+ Y TI+  + 
Sbjct: 191 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 250

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +      A+  + +   KG  P ++TY  LI  +C     + A  +L DM     +P++V
Sbjct: 251 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 310

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+++L++   K+GK  +A  + + ++ R ++P+  TY++L++        D    + ++M
Sbjct: 311 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 370

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P V TYN LI G CK   V+  +  F +M  +    + VTYNT++  L + G  
Sbjct: 371 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 430

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A ++   +      P +ITY+ L+DGL K G +EKA+V++  + ++ + PD  T+  +
Sbjct: 431 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 490

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+A +VE+  DL   +  +G K     Y  +I G C+    + A  +   M     
Sbjct: 491 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 550

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            P+   ++T+++    DG    + +L +++
Sbjct: 551 LPNSGTYNTLIRARLRDGDKAASAELIKEM 580



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 241/484 (49%), Gaps = 28/484 (5%)

Query: 91  LRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           LRG+  +  S+D              EK +  +L +     KL DA  L   M +   +P
Sbjct: 19  LRGVYFSAASYDYR------------EKLSRNVLLDL----KLDDAVDLFGEMVQSRPLP 62

Query: 151 ---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI 207
              +F+  ++ I  + + D +    + +Q + +S    D  +YN+++   C+R Q+  A+
Sbjct: 63  SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS---YDLYSYNILINCFCRRSQLPLAL 119

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
           A+L +M   G EPD++T +++L       +  +A+            P  +T+  LI  +
Sbjct: 120 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 179

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                 + A+ ++D M   GC PD+ TY ++VN  CK+G  D A+ ++  +    +E + 
Sbjct: 180 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 239

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINS 384
           + Y T++ +L +   +  V+  L++  E  +    P V TYN LI  LC YG    A   
Sbjct: 240 VIYTTIIDALCN---YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 296

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            + M+ +   P++VT++ ++ A  KEG L EA +L   +   S  P + TY++LI+G   
Sbjct: 297 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 356

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              +++A  ++  M+     P+ +T+ TLI GFC+A +VEE ++L +E+ +RG       
Sbjct: 357 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 416

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I GL ++   DMA ++ + M+S    PD   +S ++  +   G  E+A  +++ L 
Sbjct: 417 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 476

Query: 565 EWKV 568
           + K+
Sbjct: 477 KSKM 480



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 172/362 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      I+   C+   + DA  L   M  +   P+     +LIR L    R   AS
Sbjct: 235 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 294

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+     P+ +T++ ++    K G++  A  L DEM     +PD+ TY++++   
Sbjct: 295 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 354

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   ++  + K C P ++TY  LI+  CK   +   +E+  +M+  G   + 
Sbjct: 355 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 414

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L+    + G  D A  +   ++S G+ P+ ITY+ LL  L   G  +    + + 
Sbjct: 415 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 474

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + ++   P ++TYNI+I G+CK G V+   + F  +  K  +P+++ Y T++   C++G+
Sbjct: 475 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 534

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             EA  L   +      P   TYNTLI    + G    +  L  +M   G   D  T   
Sbjct: 535 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 594

Query: 473 LI 474
           +I
Sbjct: 595 VI 596


>gi|79369396|ref|NP_176481.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806495|sp|Q9LQ14.2|PPR96_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62930, chloroplastic; Flags: Precursor
 gi|332195902|gb|AEE34023.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 242/453 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  + N ++  FC R +L  A  ++  M +    PD     +L+ G     RI +A 
Sbjct: 111 ISYDLYSYNILINCFCRRSQLPLALAVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAV 170

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M +    P+T+T+N ++ GL    +   A+AL+D M   GC+PD+ TY T++  +
Sbjct: 171 ALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGL 230

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+   K   +      ++ YT +I+ +C    +  A+ +  +M  +G  P++
Sbjct: 231 CKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNV 290

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYNSL+   C  G++ DA  ++++++ R + PN +T++ L+ +    G     +K+ D 
Sbjct: 291 VTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 350

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M + S  P +FTY+ LING C +  +D A + F  M+SK+C P++VTYNT++   CK   
Sbjct: 351 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKR 410

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + E ++L   ++        +TYNTLI GL + G  + A  ++ +M+ +G+ PD IT+  
Sbjct: 411 VEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSI 470

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++E+A+ + + + K   +     Y ++I G+CK+ KV+    +   +    
Sbjct: 471 LLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKG 530

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KP+  +++T++      G+ EEA  L++++ E
Sbjct: 531 VKPNVIIYTTMISGFCRKGLKEEADALFREMKE 563



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 226/450 (50%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + +L  +C   ++++A  L+D M      P+      LI GL   ++  +A  
Sbjct: 147 EPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGLFLHNKASEAVA 206

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  PD  TY  +V GLCKRG I  A++LL +M     E DV+ Y TI+  + 
Sbjct: 207 LIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYTTIIDALC 266

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +      A+  + +   KG  P ++TY  LI  +C     + A  +L DM     +P++V
Sbjct: 267 NYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRLLSDMIERKINPNVV 326

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+++L++   K+GK  +A  + + ++ R ++P+  TY++L++        D    + ++M
Sbjct: 327 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 386

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P V TYN LI G CK   V+  +  F +M  +    + VTYNT++  L + G  
Sbjct: 387 ISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYNTLIQGLFQAGDC 446

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A ++   +      P +ITY+ L+DGL K G +EKA+V++  + ++ + PD  T+  +
Sbjct: 447 DMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQKSKMEPDIYTYNIM 506

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+A +VE+  DL   +  +G K     Y  +I G C+    + A  +   M     
Sbjct: 507 IEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGLKEEADALFREMKEDGT 566

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            P+   ++T+++    DG    + +L +++
Sbjct: 567 LPNSGTYNTLIRARLRDGDKAASAELIKEM 596



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 241/484 (49%), Gaps = 28/484 (5%)

Query: 91  LRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           LRG+  +  S+D              EK +  +L +     KL DA  L   M +   +P
Sbjct: 35  LRGVYFSAASYDYR------------EKLSRNVLLDL----KLDDAVDLFGEMVQSRPLP 78

Query: 151 ---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI 207
              +F+  ++ I  + + D +    + +Q + +S    D  +YN+++   C+R Q+  A+
Sbjct: 79  SIVEFNKLLSAIAKMNKFDLVISLGERMQNLRIS---YDLYSYNILINCFCRRSQLPLAL 135

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
           A+L +M   G EPD++T +++L       +  +A+            P  +T+  LI  +
Sbjct: 136 AVLGKMMKLGYEPDIVTLSSLLNGYCHGKRISEAVALVDQMFVMEYQPNTVTFNTLIHGL 195

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                 + A+ ++D M   GC PD+ TY ++VN  CK+G  D A+ ++  +    +E + 
Sbjct: 196 FLHNKASEAVALIDRMVARGCQPDLFTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADV 255

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINS 384
           + Y T++ +L +   +  V+  L++  E  +    P V TYN LI  LC YG    A   
Sbjct: 256 VIYTTIIDALCN---YKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDASRL 312

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            + M+ +   P++VT++ ++ A  KEG L EA +L   +   S  P + TY++LI+G   
Sbjct: 313 LSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCM 372

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              +++A  ++  M+     P+ +T+ TLI GFC+A +VEE ++L +E+ +RG       
Sbjct: 373 HDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVT 432

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I GL ++   DMA ++ + M+S    PD   +S ++  +   G  E+A  +++ L 
Sbjct: 433 YNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEYLQ 492

Query: 565 EWKV 568
           + K+
Sbjct: 493 KSKM 496



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 97/362 (26%), Positives = 172/362 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      I+   C+   + DA  L   M  +   P+     +LIR L    R   AS
Sbjct: 251 IEADVVIYTTIIDALCNYKNVNDALNLFTEMDNKGIRPNVVTYNSLIRCLCNYGRWSDAS 310

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+     P+ +T++ ++    K G++  A  L DEM     +PD+ TY++++   
Sbjct: 311 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 370

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   ++  + K C P ++TY  LI+  CK   +   +E+  +M+  G   + 
Sbjct: 371 CMHDRLDEAKHMFELMISKDCFPNVVTYNTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 430

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L+    + G  D A  +   ++S G+ P+ ITY+ LL  L   G  +    + + 
Sbjct: 431 VTYNTLIQGLFQAGDCDMAQKIFKKMVSDGVPPDIITYSILLDGLCKYGKLEKALVVFEY 490

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + ++   P ++TYNI+I G+CK G V+   + F  +  K  +P+++ Y T++   C++G+
Sbjct: 491 LQKSKMEPDIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPNVIIYTTMISGFCRKGL 550

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             EA  L   +      P   TYNTLI    + G    +  L  +M   G   D  T   
Sbjct: 551 KEEADALFREMKEDGTLPNSGTYNTLIRARLRDGDKAASAELIKEMRSCGFVGDASTISM 610

Query: 473 LI 474
           +I
Sbjct: 611 VI 612


>gi|242073534|ref|XP_002446703.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
 gi|241937886|gb|EES11031.1| hypothetical protein SORBIDRAFT_06g020845 [Sorghum bicolor]
          Length = 802

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 154/488 (31%), Positives = 244/488 (50%), Gaps = 22/488 (4%)

Query: 94  LTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH 153
           L + +K ++  L SS    V N   T N   +  C  GK   A ++I +M  +  +PD  
Sbjct: 234 LALAEKVYEEMLASS---CVLNKVNTAN-FARCLCGMGKFDMAFQIIKVMMGKGFVPDTS 289

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
               +I  L    ++EKA  + Q M   G  PD  TY +++   CK G I  A +  DEM
Sbjct: 290 TYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEM 349

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              GC  +V+TY  +L       +  QA   +   +  GCPP  ITY+ L++ +CK   I
Sbjct: 350 RSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEI 409

Query: 274 ARAIEVL-----------DDMAIEG-----CSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            +A EV             D   EG      +P++VTY +L++  CK  K  DA  +++ 
Sbjct: 410 QKACEVYTKLIGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDA 469

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +LS G EPN I Y+ L+      G  D   ++   M++  + PTV TY  LI+ + K   
Sbjct: 470 MLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRR 529

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +D A+   +QMV  +C P++VTY  ++  LC+ G   +AL+LL ++    CSP ++TY  
Sbjct: 530 LDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTA 589

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LIDGL K G ++ ++ L+ QM   G +P+ +T+R LI   C A  ++EA  LL E+ +  
Sbjct: 590 LIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY 649

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y  V+ G   SKK   ++ +LE + S    P   V+  ++   +  G  EEA 
Sbjct: 650 WPKYLQGYCSVVQGF--SKKFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEAL 707

Query: 558 KLWQKLIE 565
           +L ++++E
Sbjct: 708 ELHKEMME 715



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 223/472 (47%), Gaps = 25/472 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T     Q  C  G+ +DA  +I+   R +   D   C  +I GL+     ++A   L
Sbjct: 74  DKFTVGCFAQALCKEGRWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISFL 130

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +  +P+ +TY  ++ G  K+ Q+     +++ M   GC P+   +N+++ +  + 
Sbjct: 131 HRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNA 190

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC------KQCGIARAIEVLDDMAIEGCS 289
             +  A    K     GCPP  + Y I I  +C          +A A +V ++M    C 
Sbjct: 191 RDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCV 250

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            + V   +     C  GK+D A  +I  ++ +G  P++ TY+ ++  L      +    +
Sbjct: 251 LNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLL 310

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M     +P V+TY ILI+  CK GL+++A + F++M S  C  ++VTY  +L A  K
Sbjct: 311 FQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLK 370

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM---------- 459
              L +A  + + +  + C P  ITY+ L+DGL K G ++KA  +Y +++          
Sbjct: 371 AKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLIGTSDNVGSDF 430

Query: 460 ------ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
                  + I+P+ +T+  LI G C+A +V +A +LL  +   G +  +  Y  +I G C
Sbjct: 431 YFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFC 490

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K  K+D A +V   M    Y P    +++++  +  D   + A K+  +++E
Sbjct: 491 KVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVE 542



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 128/477 (26%), Positives = 227/477 (47%), Gaps = 26/477 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI-------RIDRIEKASK 173
           N ++ ++C+      A KL+  MA     P  +   N+  G I         D +  A K
Sbjct: 181 NSLVHSYCNARDYPYAYKLLKRMADCG-CPPGYVAYNIFIGSICGGEELPSPDLLALAEK 239

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V + M+ S  V + +        LC  G+   A  ++  M   G  PD  TY+ ++  + 
Sbjct: 240 VYEEMLASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLC 299

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +  K ++A   +++    G  P + TYTILI+  CK   I +A    D+M   GCS ++V
Sbjct: 300 EAMKVEKAFLLFQEMKSVGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVV 359

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG----CWDAVDKI 349
           TY +L++   K  +   A  + N ++  G  PN+ITY+ L+  L   G      +   K+
Sbjct: 360 TYTALLHAYLKAKQLPQASDIFNRMIDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKL 419

Query: 350 L--------DIMNEASH----SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
           +        D   E  H    +P V TY  LI+GLCK   V  A    + M+S  C+P+ 
Sbjct: 420 IGTSDNVGSDFYFEGKHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDAMLSNGCEPNH 479

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           + Y+ ++   CK G ++ A ++   ++     P + TY +LID + K   ++ AM +  Q
Sbjct: 480 IIYDALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQ 539

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+E+  +P+ +T+  +I G CR  + ++A+ LL  + ++G       Y  +I GL KS K
Sbjct: 540 MVESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGK 599

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE--WKVFEKG 572
           VD+++Q+   M +    P+   +  ++      G+ +EA+ L  ++ +  W  + +G
Sbjct: 600 VDLSLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQG 656



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 93/343 (27%), Positives = 165/343 (48%), Gaps = 5/343 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL +  ++  A ++L  M+ +G  P+ I Y+ ++ G CK G+I +A  +   MS  G
Sbjct: 450 LIDGLCKAHKVVDAQELLDAMLSNGCEPNHIIYDALIDGFCKVGKIDNAQEVFLRMSKCG 509

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P V TY +++  MF + +   A+      +   C P ++TYT +I+ +C+     +A+
Sbjct: 510 YLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVESSCTPNVVTYTAMIDGLCRIGECQKAL 569

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++L  M  +GCSP++VTY +L++   K GK D ++ +   + ++G  PN +TY  L++  
Sbjct: 570 KLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDLSLQLFIQMSTKGCAPNYVTYRVLINHC 629

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            + G  D    +L  M +      +  Y  ++ G  K  +    +    ++ S    P  
Sbjct: 630 CAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQGFSKKFIASLGL--LEELESHGTVPIA 687

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT---YNTLIDGLAKKGCMEKAMVL 454
             Y  ++    K G L EAL+L   +   S S  + +   Y +LI  L     +EKA  L
Sbjct: 688 PVYGLLIDNFSKAGRLEEALELHKEMMELSSSLNITSKDMYTSLIQALCLASQLEKAFEL 747

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           Y ++   G+ P+      LI G  + ++  EA+ L   I   G
Sbjct: 748 YSEITRKGVVPELSVFVCLIKGLIKVNKWNEALQLCYSICDEG 790



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 105/396 (26%), Positives = 173/396 (43%), Gaps = 23/396 (5%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P   TYN +V  L   GQ+     +  EMS SG   D           F  G F QA
Sbjct: 35  GYRPSGATYNALVQVLATAGQMDMGFRVQKEMSESGFCMD----------KFTVGCFAQA 84

Query: 242 I---GFWKDQL----RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +   G W D L    R+      +  T +I  + +      AI  L  M    C P++VT
Sbjct: 85  LCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFLHRMRCNSCIPNVVT 144

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +L+    K+ +      +IN ++  G  PN   +N+L+HS  +   +    K+L  M 
Sbjct: 145 YRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVHSYCNARDYPYAYKLLKRMA 204

Query: 355 EASHSPTVFTYNILINGLC------KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +    P    YNI I  +C         L+  A   + +M++ +C  + V        LC
Sbjct: 205 DCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEMLASSCVLNKVNTANFARCLC 264

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G  + A Q++ ++ G    P   TY+ +I  L +   +EKA +L+ +M   G++PD  
Sbjct: 265 GMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVEKAFLLFQEMKSVGVNPDVY 324

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  LI  FC+A  +E+A     E+   G       Y  ++H   K+K++  A  +   M
Sbjct: 325 TYTILIDSFCKAGLIEQARSWFDEMRSIGCSANVVTYTALLHAYLKAKQLPQASDIFNRM 384

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           I +   P+   +S +V  +   G  ++A +++ KLI
Sbjct: 385 IDAGCPPNTITYSALVDGLCKAGEIQKACEVYTKLI 420



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/304 (26%), Positives = 146/304 (48%), Gaps = 5/304 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++  FC  GK+ +A ++   M++   +P  H   +LI  + +  R++ A KVL  MV 
Sbjct: 483 DALIDGFCKVGKIDNAQEVFLRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAMKVLSQMVE 542

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           S   P+ +TY  M+ GLC+ G+ + A+ LL  M   GC P+V+TY  ++  +  +GK   
Sbjct: 543 SSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEEKGCSPNVVTYTALIDGLGKSGKVDL 602

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           ++  +     KGC P  +TY +LI   C    +  A  +L +M        +  Y S+V 
Sbjct: 603 SLQLFIQMSTKGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYLQGYCSVVQ 662

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K  K+  ++ ++  L S G  P +  Y  L+ +    G  +   ++   M E S S 
Sbjct: 663 GFSK--KFIASLGLLEELESHGTVPIAPVYGLLIDNFSKAGRLEEALELHKEMMELSSSL 720

Query: 361 TVFT---YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            + +   Y  LI  LC    +++A   ++++  K   P++  +  ++  L K    NEAL
Sbjct: 721 NITSKDMYTSLIQALCLASQLEKAFELYSEITRKGVVPELSVFVCLIKGLIKVNKWNEAL 780

Query: 418 QLLH 421
           QL +
Sbjct: 781 QLCY 784



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 64/309 (20%), Positives = 110/309 (35%), Gaps = 73/309 (23%)

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +     L S   R C  +       + +  + P+  TYN L+  L   G +D       +
Sbjct: 6   VAATAALRSSLRRACSSSSHTADPELKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKE 65

Query: 388 MVSKNCQPDIVTYNTVLGALCKEG--------------------------------MLNE 415
           M       D  T      ALCKEG                                + +E
Sbjct: 66  MSESGFCMDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDE 125

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+  LH +  +SC P ++TY TL+ G  KK  +     +   MM+ G +P+     +L+ 
Sbjct: 126 AISFLHRMRCNSCIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMKEGCNPNPSLFNSLVH 185

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK------------------- 516
            +C A     A  LLK +   G      AY + I  +C  +                   
Sbjct: 186 SYCNARDYPYAYKLLKRMADCGCPPGYVAYNIFIGSICGGEELPSPDLLALAEKVYEEML 245

Query: 517 ----------------------KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
                                 K DMA Q++++M+   + PD + +S ++  + +    E
Sbjct: 246 ASSCVLNKVNTANFARCLCGMGKFDMAFQIIKVMMGKGFVPDTSTYSKVITFLCEAMKVE 305

Query: 555 EAYKLWQKL 563
           +A+ L+Q++
Sbjct: 306 KAFLLFQEM 314


>gi|255565812|ref|XP_002523895.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536825|gb|EEF38464.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 784

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 139/450 (30%), Positives = 233/450 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N IL   C +GKL +A  L+  M     +P+ +    L+ G  ++  +++A++V+
Sbjct: 246 DNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVI 305

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M  +  +PD  TYNM++GGLCK G+I  A  L DEM      PDV+TYNT++   FD 
Sbjct: 306 DLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDC 365

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +          KG  P  +TY ++++   K+  +  A   L  M   G SPD VT+
Sbjct: 366 SSSLKGFELIDKMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTF 425

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  CK G+  +A  +++ +  +G++ NS+T NT+LH+L      D   K+L   ++
Sbjct: 426 NTLINGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK 485

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             +     +Y  LI G  K G    A+  +++M  K   P I+TYNT++G LC  G  ++
Sbjct: 486 RGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQ 545

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           ++  L+ L  S   P   TYNT+I G  ++G +EKA   + +M++    PD  T   L+ 
Sbjct: 546 SIDKLNELLESGLVPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLR 605

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C    +++A+ L      +G  +    Y  +I GLCK  + + A  +L  M   +  P
Sbjct: 606 GLCTEGMLDKALKLFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGP 665

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   ++ I+  +AD G  +EA +   +++E
Sbjct: 666 DCYTYNAILSALADAGRMKEAEEFMSRIVE 695



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 143/506 (28%), Positives = 231/506 (45%), Gaps = 73/506 (14%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA--SKVLQIMVMSGGVP-DTITYNM 192
           A+++ + M R +  P+   C  LI  L+R         SK +   V+  GV  +T T+N+
Sbjct: 158 AAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIKLGVKVNTNTFNI 217

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++ G C   ++  AI L+ +M    C PD ++YNTIL  +   GK  +A     D    G
Sbjct: 218 LIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNG 277

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA- 311
             P   T+ IL+   CK   +  A +V+D MA     PD+ TYN L+   CK GK D+A 
Sbjct: 278 LLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIGGLCKDGKIDEAF 337

Query: 312 --------------VLVINNLLS--------------------RGMEPNSITYNTLLHSL 337
                         V+  N L++                    +G++PN++TYN ++   
Sbjct: 338 RLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKPNAVTYNVVVKWY 397

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D     L  M E+  SP   T+N LING CK G +  A    ++M  K  + + 
Sbjct: 398 VKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMMDEMSRKGLKMNS 457

Query: 398 VTYNTVLGALCKEGMLNEALQLL---------------------HLLNGSSCS------- 429
           VT NT+L  LC E  L++A +LL                     +  +G S         
Sbjct: 458 VTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKDGKSVEAMKLWDE 517

Query: 430 -------PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
                  P +ITYNT+I GL   G  ++++    +++E+G+ PD+ T+ T+I G+CR  Q
Sbjct: 518 MKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTYNTIILGYCREGQ 577

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VE+A     ++ K+  K       +++ GLC    +D A+++    IS     D   ++T
Sbjct: 578 VEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALKLFNTWISKGKAIDAVTYNT 637

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           I+  +  +   EEA+ L  ++ E K+
Sbjct: 638 IISGLCKEDRFEEAFDLLAEMEEKKL 663



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 199/445 (44%), Gaps = 38/445 (8%)

Query: 159 IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK---RGQIRSAIALLDEMSV 215
           I   +  +R   A+++   M      P+ +T N ++  L +   +  +  + A+  ++  
Sbjct: 146 IGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPSVYLSKAIFSDVIK 205

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G + +  T+N ++       K  +AIG         C P  ++Y  +++ +CK+  +  
Sbjct: 206 LGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNTILDVLCKKGKLNE 265

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A ++L DM   G  P+  T+N LV+  CK G   +A  VI+ +    + P+  TYN L+ 
Sbjct: 266 ARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNNVLPDVWTYNMLIG 325

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L   G  D   ++ D M      P V TYN LING        +     ++M  K  +P
Sbjct: 326 GLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKMEGKGVKP 385

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           + VTYN V+    KEG ++ A   L  +  S  SP  +T+NTLI+G  K G + +A  + 
Sbjct: 386 NAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRLSEAFRMM 445

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG------------------ 497
            +M   G+  + +T  T++   C   ++++A  LL    KRG                  
Sbjct: 446 DEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKD 505

Query: 498 ----------NKMRNS-------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
                     ++M+          Y  +I GLC S K D +I  L  ++ S   PD+T +
Sbjct: 506 GKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGLVPDETTY 565

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           +TI+     +G  E+A++   K+++
Sbjct: 566 NTIILGYCREGQVEKAFQFHNKMVK 590



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 112/469 (23%), Positives = 194/469 (41%), Gaps = 82/469 (17%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF----------HFCINLIRGLIRIDRI 168
           T N ++   C  GK+ +A +L D M     +PD             C + ++G   ID++
Sbjct: 319 TYNMLIGGLCKDGKIDEAFRLKDEMENLKLLPDVVTYNTLINGCFDCSSSLKGFELIDKM 378

Query: 169 E-------------------------KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
           E                          A   L+ M  SG  PD +T+N ++ G CK G++
Sbjct: 379 EGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLINGYCKAGRL 438

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTM------------------------------- 232
             A  ++DEMS  G + + +T NTIL T+                               
Sbjct: 439 SEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTL 498

Query: 233 ----FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
               F +GK  +A+  W +   K   P +ITY  +I  +C      ++I+ L+++   G 
Sbjct: 499 IMGYFKDGKSVEAMKLWDEMKEKEIIPSIITYNTMIGGLCHSGKTDQSIDKLNELLESGL 558

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD  TYN+++   C++G+ + A    N ++ +  +P+  T N LL  L + G  D   K
Sbjct: 559 VPDETTYNTIILGYCREGQVEKAFQFHNKMVKKSFKPDLFTCNILLRGLCTEGMLDKALK 618

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + +       +    TYN +I+GLCK    + A +   +M  K   PD  TYN +L AL 
Sbjct: 619 LFNTWISKGKAIDAVTYNTIISGLCKEDRFEEAFDLLAEMEEKKLGPDCYTYNAILSALA 678

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G + EA + +           ++    L D   +   + K  +           P+ +
Sbjct: 679 DAGRMKEAEEFMSR---------IVEQGKLQD---QTISLNKRKIESSSETSQESDPNSV 726

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           T    I   C   + ++A+ +++E  ++G  +  S Y  ++ GL K +K
Sbjct: 727 TFSEQINELCTQGKYKDAMHMVQESTQKGITLHKSTYISLMEGLIKRRK 775



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 93/217 (42%), Gaps = 38/217 (17%)

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK------ 444
           K  Q   V  +T +GA       + A Q+ + +      P L+T NTLI+ L +      
Sbjct: 133 KKVQSLRVILDTSIGAYVACNRPHHAAQIFNRMKRLHLKPNLLTCNTLINALVRYPSKPS 192

Query: 445 ---------------------------KGC-----MEKAMVLYGQMMENGISPDDITHRT 472
                                       GC     + +A+ L G+M +    PD++++ T
Sbjct: 193 VYLSKAIFSDVIKLGVKVNTNTFNILIYGCCIENKLSEAIGLIGKMKDFSCFPDNVSYNT 252

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++   C+  ++ EA DLL ++   G     + + +++ G CK   +  A QV++LM  + 
Sbjct: 253 ILDVLCKKGKLNEARDLLLDMKNNGLLPNRNTFNILVSGYCKLGWLKEAAQVIDLMAQNN 312

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             PD   ++ ++  +  DG  +EA++L  ++   K+ 
Sbjct: 313 VLPDVWTYNMLIGGLCKDGKIDEAFRLKDEMENLKLL 349


>gi|225436658|ref|XP_002276327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Vitis vinifera]
          Length = 728

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/448 (32%), Positives = 241/448 (53%), Gaps = 4/448 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L+  C  G + +A  LI  M R++  PD      LI GL +  ++++A  +L  M  
Sbjct: 148 NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 207

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P+++T   ++ GLCK G++  A+ LL+ M   G + DV+ Y T++    +NG   +
Sbjct: 208 AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 267

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               + + L KG    ++TY+ L+  +C+      A  VL+ MA  G  PD+VTY  L++
Sbjct: 268 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 327

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+   A+ ++N ++ +G EP+++TYN LL  L   G      KIL +M E     
Sbjct: 328 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 387

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMV-SKNC-QPDIVTYNTVLGALCKEGMLNEALQ 418
            V TYN L+ GLC  G VD A+  FN M  ++NC +P++ T+N ++G LCKEG L +A++
Sbjct: 388 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 447

Query: 419 LLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +   ++   SC   L+TYN L+ G  K G +++AM L+ Q+++ G  P+  T+  LI GF
Sbjct: 448 IHRKMVKKGSCGN-LVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 506

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+   +  A  L  E+   G       Y  ++  LCK   ++ A  + + M ++  +PD 
Sbjct: 507 CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDI 566

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             F+T++      G  +   +L  K++E
Sbjct: 567 ISFNTMIDGTLKAGDFQFVKELQMKMVE 594



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 229/454 (50%), Gaps = 2/454 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  + N ++   C   KL +A  L+  M      P+   C  L+ GL +  R+++A 
Sbjct: 175 VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 234

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L+ M   G   D + Y  ++ G C  G +     L DEM   G   +V+TY+ ++  +
Sbjct: 235 ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 294

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G++K+A          G  P ++TYT LI+ +CK      A+++L+ M  +G  P  
Sbjct: 295 CRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSN 354

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN L++  CK+G   DA  ++  ++ +G + + +TYNTL+  L  +G  D   K+ + 
Sbjct: 355 VTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNS 414

Query: 353 M--NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           M  NE    P VFT+N+LI GLCK G + +A+    +MV K    ++VTYN +LG   K 
Sbjct: 415 MFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKA 474

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G + EA++L   +      P   TY+ LIDG  K   +  A  L+ +M  +G++P    +
Sbjct: 475 GKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDY 534

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            TL+   C+   +E+A  L +E+G    +    ++  +I G  K+       ++   M+ 
Sbjct: 535 NTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 594

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              +PD   FST++ +++  G  +EA    ++++
Sbjct: 595 MGLRPDALTFSTLINRLSKLGELDEAKSALERMV 628



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 215/404 (53%), Gaps = 2/404 (0%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M   + +P F     LI       + +    V+ +++  G   +    N+++ GLC+ G 
Sbjct: 100 MTHVDVLPSFGSLSALIECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGG 159

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +  A+ L+ EM      PD+++YNT++  +    K K+A+G   +    GC P  +T T 
Sbjct: 160 VFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTT 219

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L++ +CK   +  A+E+L+ M  +G   D+V Y +L++  C  G  D    + + +L +G
Sbjct: 220 LMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKG 279

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +  N +TY+ L+H L   G W   + +L+ M E    P V TY  LI+GLCK G    A+
Sbjct: 280 ISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAM 339

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           +  N MV K  +P  VTYN +L  LCKEG++ +A ++L ++        ++TYNTL+ GL
Sbjct: 340 DLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGL 399

Query: 443 AKKGCMEKAMVLYGQMM--ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
             KG +++A+ L+  M   EN + P+  T   LI G C+  ++ +AV + +++ K+G+  
Sbjct: 400 CDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCG 459

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
               Y +++ G  K+ K+  A+++ + ++   + P+   +S ++
Sbjct: 460 NLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILI 503



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 228/459 (49%), Gaps = 7/459 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G++ +A +L++ M ++    D      LI G      +++  ++   M
Sbjct: 216 TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 275

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   + +TY+ +V GLC+ GQ + A  +L+ M+  G  PDV+TY  ++  +  +G+ 
Sbjct: 276 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 335

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+      + KG  P  +TY +L+  +CK+  +  A ++L  M  +G   D+VTYN+L
Sbjct: 336 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 395

Query: 299 VNFSCKQGKYDDAVLVINNLLSRG--MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +   C +GK D+A+ + N++      +EPN  T+N L+  L   G      KI   M + 
Sbjct: 396 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 455

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
                + TYN+L+ G  K G +  A+  + Q++     P+  TY+ ++   CK  MLN A
Sbjct: 456 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 515

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             L   +     +P L  YNTL+  L K+G +E+A  L+ +M      PD I+  T+I G
Sbjct: 516 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 575

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             +A   +   +L  ++ + G +     +  +I+ L K  ++D A   LE M++S + PD
Sbjct: 576 TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPD 635

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             V+ +++K ++  G T E   L  ++       KGT L
Sbjct: 636 ALVYDSLLKGLSSKGDTTEIINLLHQMA-----AKGTVL 669



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 209/408 (51%), Gaps = 5/408 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G+  +A+ +++ MA     PD      LI GL +  R   A  +L +MV  G
Sbjct: 290 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 349

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P  +TYN+++ GLCK G +  A  +L  M   G + DV+TYNT+++ + D GK  +A+
Sbjct: 350 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 409

Query: 243 GFWKDQL-RKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
             +      + C  P + T+ +LI  +CK+  + +A+++   M  +G   ++VTYN L+ 
Sbjct: 410 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLG 469

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K GK  +A+ +   +L  G  PNS TY+ L+         +    +   M     +P
Sbjct: 470 GCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP 529

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +F YN L+  LCK G +++A + F +M + NC+PDI+++NT++    K G      +L 
Sbjct: 530 ALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQ 589

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P  +T++TLI+ L+K G +++A     +M+ +G +PD + + +L+ G    
Sbjct: 590 MKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSK 649

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
               E ++LL ++  +G  +       ++  LC S +    + V+EL+
Sbjct: 650 GDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQ---EVDVMELL 694



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 192/384 (50%), Gaps = 2/384 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           +P   T N +V  L +      A ++   M+     P   + + ++    D  K +   G
Sbjct: 71  LPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALIECFADAQKPQLGFG 130

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
                L++G    +    I+++ +C+  G+  A+ ++ +M  +  SPDIV+YN+L+N  C
Sbjct: 131 VVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLC 190

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K  K  +AV ++  + + G  PNS+T  TL+  L   G  D   ++L+ M +      V 
Sbjct: 191 KAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVV 250

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
            Y  LI+G C  G +DR    F++M+ K    ++VTY+ ++  LC+ G   EA  +L+ +
Sbjct: 251 LYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAM 310

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P ++TY  LIDGL K G    AM L   M+E G  P ++T+  L+ G C+   V
Sbjct: 311 AEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLV 370

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR--YKPDDTVFS 541
            +A  +L+ + ++G K     Y  ++ GLC   KVD A+++   M  +    +P+   F+
Sbjct: 371 IDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFN 430

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++  +  +G   +A K+ +K+++
Sbjct: 431 MLIGGLCKEGRLTKAVKIHRKMVK 454



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/310 (29%), Positives = 157/310 (50%), Gaps = 2/310 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E    T N +L   C  G + DA K++ +M  + +  D      L++GL    ++++A K
Sbjct: 351 EPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALK 410

Query: 174 VLQIMVMSGGV--PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           +   M  +     P+  T+NM++GGLCK G++  A+ +  +M   G   +++TYN +L  
Sbjct: 411 LFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGG 470

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               GK K+A+  WK  L  G  P   TY+ILI+  CK   +  A  +  +M   G +P 
Sbjct: 471 CLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPA 530

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +  YN+L+   CK+G  + A  +   + +   EP+ I++NT++      G +  V ++  
Sbjct: 531 LFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQM 590

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M E    P   T++ LIN L K G +D A ++  +MV+    PD + Y+++L  L  +G
Sbjct: 591 KMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKG 650

Query: 412 MLNEALQLLH 421
              E + LLH
Sbjct: 651 DTTEIINLLH 660



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 157/326 (48%), Gaps = 2/326 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMA-RRNQIPDFHFCIN-LIRGLIRIDRIEKASK 173
           D  T N +++  C +GK+ +A KL + M    N +    F  N LI GL +  R+ KA K
Sbjct: 388 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 447

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + MV  G   + +TYNM++GG  K G+I+ A+ L  ++   G  P+  TY+ ++    
Sbjct: 448 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 507

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
                  A G + +    G  P L  Y  L+  +CK+  + +A  +  +M    C PDI+
Sbjct: 508 KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDII 567

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           ++N++++ + K G +     +   ++  G+ P+++T++TL++ L   G  D     L+ M
Sbjct: 568 SFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERM 627

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
             +  +P    Y+ L+ GL   G     IN  +QM +K    D    +T+L  LC     
Sbjct: 628 VASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQE 687

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLI 439
            + ++LL      +     I+ N L+
Sbjct: 688 VDVMELLPTFFQGTSEGASISCNELL 713



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 42/184 (22%), Positives = 87/184 (47%)

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A++ F+  +  N  P   T N ++ AL +      A  +   +      P   + + LI
Sbjct: 57  EAVSLFHSALDFNLLPSWATCNFLVDALARSRNYGLAFSVYRRMTHVDVLPSFGSLSALI 116

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +  A     +    + G +++ G + +      ++ G CR   V EA+ L++E+G++   
Sbjct: 117 ECFADAQKPQLGFGVVGLVLKRGFTVNVFIMNIVLKGLCRNGGVFEAMGLIREMGRKSVS 176

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
               +Y  +I+GLCK+KK+  A+ +L  M ++   P+    +T++  +  DG  +EA +L
Sbjct: 177 PDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAMEL 236

Query: 560 WQKL 563
            + +
Sbjct: 237 LEAM 240



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 1/229 (0%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           D  FV N   T + ++  FC    L  A  L   M      P       L+  L +   +
Sbjct: 489 DLGFVPNS-FTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 547

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E+A  + Q M  +   PD I++N M+ G  K G  +    L  +M   G  PD +T++T+
Sbjct: 548 EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTL 607

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +   G+  +A    +  +  G  P  + Y  L++ +  +      I +L  MA +G 
Sbjct: 608 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT 667

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
             D    ++++   C   +  D + ++        E  SI+ N LL  L
Sbjct: 668 VLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQL 716


>gi|296083865|emb|CBI24253.3| unnamed protein product [Vitis vinifera]
          Length = 582

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/448 (32%), Positives = 241/448 (53%), Gaps = 4/448 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L+  C  G + +A  LI  M R++  PD      LI GL +  ++++A  +L  M  
Sbjct: 2   NIVLKGLCRNGGVFEAMGLIREMGRKSVSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEA 61

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P+++T   ++ GLCK G++  A+ LL+ M   G + DV+ Y T++    +NG   +
Sbjct: 62  AGCFPNSVTCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDR 121

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               + + L KG    ++TY+ L+  +C+      A  VL+ MA  G  PD+VTY  L++
Sbjct: 122 GKELFDEMLGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLID 181

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+   A+ ++N ++ +G EP+++TYN LL  L   G      KIL +M E     
Sbjct: 182 GLCKDGRATHAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKA 241

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMV-SKNC-QPDIVTYNTVLGALCKEGMLNEALQ 418
            V TYN L+ GLC  G VD A+  FN M  ++NC +P++ T+N ++G LCKEG L +A++
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 419 LLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +   ++   SC   L+TYN L+ G  K G +++AM L+ Q+++ G  P+  T+  LI GF
Sbjct: 302 IHRKMVKKGSCGN-LVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGF 360

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+   +  A  L  E+   G       Y  ++  LCK   ++ A  + + M ++  +PD 
Sbjct: 361 CKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDI 420

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             F+T++      G  +   +L  K++E
Sbjct: 421 ISFNTMIDGTLKAGDFQFVKELQMKMVE 448



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 229/454 (50%), Gaps = 2/454 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  + N ++   C   KL +A  L+  M      P+   C  L+ GL +  R+++A 
Sbjct: 29  VSPDIVSYNTLINGLCKAKKLKEAVGLLLEMEAAGCFPNSVTCTTLMDGLCKDGRMDEAM 88

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L+ M   G   D + Y  ++ G C  G +     L DEM   G   +V+TY+ ++  +
Sbjct: 89  ELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEMLGKGISANVVTYSCLVHGL 148

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G++K+A          G  P ++TYT LI+ +CK      A+++L+ M  +G  P  
Sbjct: 149 CRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKGEEPSN 208

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN L++  CK+G   DA  ++  ++ +G + + +TYNTL+  L  +G  D   K+ + 
Sbjct: 209 VTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEALKLFNS 268

Query: 353 M--NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           M  NE    P VFT+N+LI GLCK G + +A+    +MV K    ++VTYN +LG   K 
Sbjct: 269 MFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLGGCLKA 328

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G + EA++L   +      P   TY+ LIDG  K   +  A  L+ +M  +G++P    +
Sbjct: 329 GKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDY 388

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            TL+   C+   +E+A  L +E+G    +    ++  +I G  K+       ++   M+ 
Sbjct: 389 NTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVE 448

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              +PD   FST++ +++  G  +EA    ++++
Sbjct: 449 MGLRPDALTFSTLINRLSKLGELDEAKSALERMV 482



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 128/459 (27%), Positives = 228/459 (49%), Gaps = 7/459 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G++ +A +L++ M ++    D      LI G      +++  ++   M
Sbjct: 70  TCTTLMDGLCKDGRMDEAMELLEAMKKKGFDADVVLYGTLISGFCNNGNLDRGKELFDEM 129

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   + +TY+ +V GLC+ GQ + A  +L+ M+  G  PDV+TY  ++  +  +G+ 
Sbjct: 130 LGKGISANVVTYSCLVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRA 189

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+      + KG  P  +TY +L+  +CK+  +  A ++L  M  +G   D+VTYN+L
Sbjct: 190 THAMDLLNLMVEKGEEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTL 249

Query: 299 VNFSCKQGKYDDAVLVINNLLSRG--MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +   C +GK D+A+ + N++      +EPN  T+N L+  L   G      KI   M + 
Sbjct: 250 MKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKK 309

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
                + TYN+L+ G  K G +  A+  + Q++     P+  TY+ ++   CK  MLN A
Sbjct: 310 GSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIA 369

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             L   +     +P L  YNTL+  L K+G +E+A  L+ +M      PD I+  T+I G
Sbjct: 370 KGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDG 429

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             +A   +   +L  ++ + G +     +  +I+ L K  ++D A   LE M++S + PD
Sbjct: 430 TLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPD 489

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             V+ +++K ++  G T E   L  ++       KGT L
Sbjct: 490 ALVYDSLLKGLSSKGDTTEIINLLHQMA-----AKGTVL 523



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/408 (28%), Positives = 209/408 (51%), Gaps = 5/408 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G+  +A+ +++ MA     PD      LI GL +  R   A  +L +MV  G
Sbjct: 144 LVHGLCRLGQWKEANTVLNAMAEHGIHPDVVTYTGLIDGLCKDGRATHAMDLLNLMVEKG 203

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P  +TYN+++ GLCK G +  A  +L  M   G + DV+TYNT+++ + D GK  +A+
Sbjct: 204 EEPSNVTYNVLLSGLCKEGLVIDAFKILRMMIEKGKKADVVTYNTLMKGLCDKGKVDEAL 263

Query: 243 GFWKDQL-RKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
             +      + C  P + T+ +LI  +CK+  + +A+++   M  +G   ++VTYN L+ 
Sbjct: 264 KLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVKIHRKMVKKGSCGNLVTYNMLLG 323

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K GK  +A+ +   +L  G  PNS TY+ L+         +    +   M     +P
Sbjct: 324 GCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNP 383

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +F YN L+  LCK G +++A + F +M + NC+PDI+++NT++    K G      +L 
Sbjct: 384 ALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQ 443

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P  +T++TLI+ L+K G +++A     +M+ +G +PD + + +L+ G    
Sbjct: 444 MKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSK 503

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
               E ++LL ++  +G  +       ++  LC S +    + V+EL+
Sbjct: 504 GDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQ---EVDVMELL 548



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 88/326 (26%), Positives = 157/326 (48%), Gaps = 2/326 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMA-RRNQIPDFHFCIN-LIRGLIRIDRIEKASK 173
           D  T N +++  C +GK+ +A KL + M    N +    F  N LI GL +  R+ KA K
Sbjct: 242 DVVTYNTLMKGLCDKGKVDEALKLFNSMFDNENCLEPNVFTFNMLIGGLCKEGRLTKAVK 301

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + MV  G   + +TYNM++GG  K G+I+ A+ L  ++   G  P+  TY+ ++    
Sbjct: 302 IHRKMVKKGSCGNLVTYNMLLGGCLKAGKIKEAMELWKQVLDLGFVPNSFTYSILIDGFC 361

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
                  A G + +    G  P L  Y  L+  +CK+  + +A  +  +M    C PDI+
Sbjct: 362 KMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSLEQAKSLFQEMGNANCEPDII 421

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           ++N++++ + K G +     +   ++  G+ P+++T++TL++ L   G  D     L+ M
Sbjct: 422 SFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTLINRLSKLGELDEAKSALERM 481

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
             +  +P    Y+ L+ GL   G     IN  +QM +K    D    +T+L  LC     
Sbjct: 482 VASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGTVLDRKIVSTILTCLCHSIQE 541

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLI 439
            + ++LL      +     I+ N L+
Sbjct: 542 VDVMELLPTFFQGTSEGASISCNELL 567



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 94/229 (41%), Gaps = 1/229 (0%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           D  FV N   T + ++  FC    L  A  L   M      P       L+  L +   +
Sbjct: 343 DLGFVPNS-FTYSILIDGFCKMRMLNIAKGLFCEMRTHGLNPALFDYNTLMASLCKEGSL 401

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E+A  + Q M  +   PD I++N M+ G  K G  +    L  +M   G  PD +T++T+
Sbjct: 402 EQAKSLFQEMGNANCEPDIISFNTMIDGTLKAGDFQFVKELQMKMVEMGLRPDALTFSTL 461

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +   G+  +A    +  +  G  P  + Y  L++ +  +      I +L  MA +G 
Sbjct: 462 INRLSKLGELDEAKSALERMVASGFTPDALVYDSLLKGLSSKGDTTEIINLLHQMAAKGT 521

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
             D    ++++   C   +  D + ++        E  SI+ N LL  L
Sbjct: 522 VLDRKIVSTILTCLCHSIQEVDVMELLPTFFQGTSEGASISCNELLMQL 570


>gi|302806475|ref|XP_002984987.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
 gi|300147197|gb|EFJ13862.1| hypothetical protein SELMODRAFT_20977 [Selaginella moellendorffii]
          Length = 471

 Score =  240 bits (612), Expect = 2e-60,   Method: Compositional matrix adjust.
 Identities = 144/451 (31%), Positives = 241/451 (53%), Gaps = 6/451 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T+  I+    + G L  A   +D +      P+      LI    R  ++E+A K+L
Sbjct: 24  DAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTALIAAFARAKKLEEAMKLL 80

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  P+ +TYN++V  LCK   + +A  ++ +M   G  P+V+T+N+++      
Sbjct: 81  EEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGGFAPNVMTFNSLVDGFCKR 140

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A       + KG  P ++TY+ LI+ +CK      A EVL++M   G +PD  TY
Sbjct: 141 GNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAKEVLEEMKASGVTPDAFTY 200

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  CK  K ++A  ++  +   G  P+ + Y++++H+    G      K L  M +
Sbjct: 201 SALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQKTLQEMRK 260

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV-SKNCQPDIVTYNTVLGALCKEGMLN 414
              SP V TYN +I+GLCK G +  A    +QM  S +  PD+VTY+TV+  LCK  ML 
Sbjct: 261 QRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVINGLCKSDMLV 320

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +LL  +  + C+P ++TY T+IDGL K G +E+A  L   M   G +P+ +T+ TLI
Sbjct: 321 EAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPNVVTYTTLI 380

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+A +V+EA  +++E+   G       Y  +++GLC S ++  A Q+++ M   R +
Sbjct: 381 SGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQRMKDGRAE 440

Query: 535 --PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             PD   + TIV  +    + +EA +L +++
Sbjct: 441 CSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471



 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 124/397 (31%), Positives = 223/397 (56%), Gaps = 4/397 (1%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +  A ++L+ M  +G  PD  T+  ++  +   G +  A   +D +   GC+P+V+TY  
Sbjct: 6   LHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNVVTYTA 62

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++       K ++A+   ++   +GCPP L+TY +L++ +CK   +  A +V+  M   G
Sbjct: 63  LIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKKMIEGG 122

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
            +P+++T+NSLV+  CK+G  DDA  ++  ++++GM PN +TY+ L+  L     +    
Sbjct: 123 FAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQKFLEAK 182

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++L+ M  +  +P  FTY+ LI+GLCK   ++ A     +M    C PD+V Y++++ A 
Sbjct: 183 EVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAF 242

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-ISPD 466
           CK G L EA + L  +     SP ++TYNT+IDGL K G + +A V+  QM E+G + PD
Sbjct: 243 CKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPD 302

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+ T+I G C++D + EA  LL  + K G       Y  +I GLCK  +++ A  +L+
Sbjct: 303 VVTYSTVINGLCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQ 362

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            M  +   P+   ++T++  +      +EA ++ +++
Sbjct: 363 GMKRAGCAPNVVTYTTLISGLCKARKVDEAERVMEEM 399



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 156/298 (52%), Gaps = 3/298 (1%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C    +  A+E+L++M   G +PD  T+  ++      G  D A   +++L S G +PN 
Sbjct: 1   CNAGDLHAALELLEEMKSAGFAPDAFTHTPIITAMANAGDLDGA---MDHLRSMGCDPNV 57

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +TY  L+ +       +   K+L+ M E    P + TYN+L++ LCK  +V  A +   +
Sbjct: 58  VTYTALIAAFARAKKLEEAMKLLEEMRERGCPPNLVTYNVLVDALCKLSMVGAAQDVVKK 117

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M+     P+++T+N+++   CK G +++A +LL ++      P ++TY+ LIDGL K   
Sbjct: 118 MIEGGFAPNVMTFNSLVDGFCKRGNVDDARKLLGIMVAKGMRPNVVTYSALIDGLCKSQK 177

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
             +A  +  +M  +G++PD  T+  LI G C+AD++EEA  +L+ +   G       Y  
Sbjct: 178 FLEAKEVLEEMKASGVTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSS 237

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +IH  CKS K+  A + L+ M   R  PD   ++T++  +   G   EA  +  ++ E
Sbjct: 238 IIHAFCKSGKLLEAQKTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQE 295



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 142/279 (50%), Gaps = 3/279 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T + ++   C   K+ +A +++  MA     PD     ++I    +  ++ +A 
Sbjct: 193 VTPDAFTYSALIHGLCKADKIEEAEQMLRRMAGSGCTPDVVVYSSIIHAFCKSGKLLEAQ 252

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRT 231
           K LQ M      PD +TYN ++ GLCK G+I  A  +LD+M  SG   PDV+TY+T++  
Sbjct: 253 KTLQEMRKQRKSPDVVTYNTVIDGLCKLGKIAEAQVILDQMQESGDVLPDVVTYSTVING 312

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  +    +A        + GC P ++TYT +I+ +CK   +  A  +L  M   GC+P+
Sbjct: 313 LCKSDMLVEAQKLLDRMCKAGCNPDVVTYTTIIDGLCKCGRLEEAEYLLQGMKRAGCAPN 372

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VTY +L++  CK  K D+A  V+  + + G  PN +TYNT+++ L   G      +++ 
Sbjct: 373 VVTYTTLISGLCKARKVDEAERVMEEMRNAGCPPNLVTYNTMVNGLCVSGRIKEAQQLVQ 432

Query: 352 IMNE--ASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            M +  A  SP   TY  ++N L    LV  A     QM
Sbjct: 433 RMKDGRAECSPDAATYRTIVNALMSSDLVQEAEQLLEQM 471


>gi|356577033|ref|XP_003556634.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Glycine max]
          Length = 757

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 126/417 (30%), Positives = 230/417 (55%), Gaps = 2/417 (0%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           DA ++   M R    P+ +    +IRG++    +EK    ++ M   G  P+ +TYN ++
Sbjct: 190 DAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLI 249

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGC 253
              CK+ +++ A+ALL  M+V G   ++I+YN+++  +   G+  + +G   +++R KG 
Sbjct: 250 DASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSE-VGELVEEMRGKGL 308

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
            P  +TY  L+   CK+  + + + +L +M  +G SP++VTY +L+N  CK G    AV 
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           + + +  RG+ PN  TY TL+     +G  +   K+L  M  +  SP+V TYN L++G C
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
             G V  A+     MV +   PD+V+Y+TV+   C+E  L +A Q+   +      P  +
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTV 488

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TY++LI GL  +  + +A  L+ +MM  G+ PD++T+ +LI  +C   ++ +A+ L  E+
Sbjct: 489 TYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEM 548

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            +RG    N  Y ++I+GL K  +  +A ++L  +      PDD  ++T+++  +++
Sbjct: 549 VQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNN 605



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 120/429 (27%), Positives = 228/429 (53%), Gaps = 15/429 (3%)

Query: 152 FHFCIN----------LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           FH C +          +++ L R+  + KA  +L +    G  P  ++YN ++  L +R 
Sbjct: 122 FHLCSSPFSSSAVFDLVVKSLSRLGFVPKALTLLHLANRHGFAPTVLSYNAVLDALLRRS 181

Query: 202 Q-----IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
                    A  +  +M  +G  P+V TYN I+R +   G  ++ +GF +   ++G  P 
Sbjct: 182 SSNHRDYDDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPN 241

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           ++TY  LI+  CK+  +  A+ +L  MA+ G + ++++YNS++N  C +G+  +   ++ 
Sbjct: 242 VVTYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVE 301

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +  +G+ P+ +TYNTL++     G       +L  M     SP V TY  LIN +CK G
Sbjct: 302 EMRGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAG 361

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            + RA+  F+QM  +  +P+  TY T++   C++G++NEA ++L  +  S  SP ++TYN
Sbjct: 362 NLSRAVEIFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYN 421

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            L+ G    G +++A+ +   M+E G+ PD +++ T+I GFCR  ++ +A  + +E+ ++
Sbjct: 422 ALVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEK 481

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       Y  +I GLC  +K+  A  +   M+     PD+  +++++     DG   +A
Sbjct: 482 GVLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKA 541

Query: 557 YKLWQKLIE 565
            +L  ++++
Sbjct: 542 LRLHDEMVQ 550



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 211/396 (53%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A +V + MV +G  P+  TYN+++ G+  +G +   +  + +M   G  P+V+TYNT+
Sbjct: 189 DDAERVFRDMVRNGVSPNVYTYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTL 248

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +       K K+A+   +     G    LI+Y  +I  +C +  ++   E++++M  +G 
Sbjct: 249 IDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGL 308

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD VTYN+LVN  CK+G     +++++ ++ +G+ PN +TY TL++ +   G      +
Sbjct: 309 VPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVE 368

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           I D M      P   TY  LI+G C+ GL++ A    ++M+     P +VTYN ++   C
Sbjct: 369 IFDQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYC 428

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G + EA+ +L  +      P +++Y+T+I G  ++  + KA  +  +M+E G+ PD +
Sbjct: 429 FLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTV 488

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +LI G C   ++ EA DL +E+ +RG       Y  +I+  C   ++  A+++ + M
Sbjct: 489 TYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEM 548

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +   + PD+  +S ++  +     T+ A +L  KL 
Sbjct: 549 VQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLF 584



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/462 (29%), Positives = 232/462 (50%), Gaps = 17/462 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C + K+ +A  L+  MA      +     ++I GL    R+ +  ++++ M
Sbjct: 244 TYNTLIDASCKKKKVKEAMALLRAMAVGGVAANLISYNSVINGLCGKGRMSEVGELVEEM 303

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VPD +TYN +V G CK G +   + LL EM   G  P+V+TY T++  M   G  
Sbjct: 304 RGKGLVPDEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNL 363

Query: 239 KQAIGFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            +A+  + DQ+R +G  P   TYT LI+  C++  +  A +VL +M + G SP +VTYN+
Sbjct: 364 SRAVEIF-DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNA 422

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           LV+  C  G+  +AV ++  ++ RG+ P+ ++Y+T++             ++ + M E  
Sbjct: 423 LVHGYCFLGRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKG 482

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TY+ LI GLC    +  A + F +M+ +   PD VTY +++ A C +G L++AL
Sbjct: 483 VLPDTVTYSSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKAL 542

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW-- 475
           +L   +      P  +TY+ LI+GL KK   + A  L  ++      PDD+T+ TLI   
Sbjct: 543 RLHDEMVQRGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENC 602

Query: 476 -------------GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
                        GFC    + EA  + K + +R +K   + Y L+IHG  +   V  A 
Sbjct: 603 SNNEFKSVEGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAY 662

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            +   +  S +         +VK +A +GM +E  +L Q ++
Sbjct: 663 NLYMELEHSSFACHTVAVIALVKALAREGMNDELSRLLQNIL 704



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 225/460 (48%), Gaps = 15/460 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I++   S+G L      +  M +    P+      LI    +  ++++A  +L+ M
Sbjct: 209 TYNVIIRGVVSQGDLEKGLGFMRKMEKEGISPNVVTYNTLIDASCKKKKVKEAMALLRAM 268

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G   + I+YN ++ GLC +G++     L++EM   G  PD +TYNT++      G  
Sbjct: 269 AVGGVAANLISYNSVINGLCGKGRMSEVGELVEEMRGKGLVPDEVTYNTLVNGFCKEGNL 328

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            Q +    + + KG  P ++TYT LI  +CK   ++RA+E+ D M + G  P+  TY +L
Sbjct: 329 HQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIFDQMRVRGLRPNERTYTTL 388

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C++G  ++A  V++ ++  G  P+ +TYN L+H     G       IL  M E   
Sbjct: 389 IDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFLGRVQEAVGILRGMVERGL 448

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V +Y+ +I G C+   + +A     +MV K   PD VTY++++  LC +  L EA  
Sbjct: 449 PPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTYSSLIQGLCLQQKLVEAFD 508

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P  +TY +LI+     G + KA+ L+ +M++ G  PD++T+  LI G  
Sbjct: 509 LFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQRGFLPDNVTYSVLINGLN 568

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH---------------GLCKSKKVDMAIQ 523
           +  + + A  LL ++    +   +  Y  +I                G C    ++ A +
Sbjct: 569 KKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSVEGLVKGFCMKGLMNEADR 628

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           V + M+   +KP+  +++ ++   +  G   +AY L+ +L
Sbjct: 629 VFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMEL 668



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 206/442 (46%), Gaps = 15/442 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T N ++  FC  G L     L+  M  +   P+      LI  + +   + +A ++ 
Sbjct: 311 DEVTYNTLVNGFCKEGNLHQGLVLLSEMVGKGLSPNVVTYTTLINCMCKAGNLSRAVEIF 370

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G  P+  TY  ++ G C++G +  A  +L EM VSG  P V+TYN ++      
Sbjct: 371 DQMRVRGLRPNERTYTTLIDGFCQKGLMNEAYKVLSEMIVSGFSPSVVTYNALVHGYCFL 430

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ ++A+G  +  + +G PP +++Y+ +I   C++  + +A ++ ++M  +G  PD VTY
Sbjct: 431 GRVQEAVGILRGMVERGLPPDVVSYSTVIAGFCRERELGKAFQMKEEMVEKGVLPDTVTY 490

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +SL+   C Q K  +A  +   ++ RG+ P+ +TY +L+++    G      ++ D M +
Sbjct: 491 SSLIQGLCLQQKLVEAFDLFREMMRRGLPPDEVTYTSLINAYCVDGELSKALRLHDEMVQ 550

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL----------- 404
               P   TY++LINGL K      A     ++  +   PD VTYNT++           
Sbjct: 551 RGFLPDNVTYSVLINGLNKKARTKVAKRLLLKLFYEESVPDDVTYNTLIENCSNNEFKSV 610

Query: 405 ----GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
                  C +G++NEA ++   +   +  P    YN +I G ++ G + KA  LY ++  
Sbjct: 611 EGLVKGFCMKGLMNEADRVFKTMLQRNHKPNAAIYNLMIHGHSRGGNVHKAYNLYMELEH 670

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           +  +   +    L+    R    +E   LL+ I +          ++++    K   +D 
Sbjct: 671 SSFACHTVAVIALVKALAREGMNDELSRLLQNILRSCRLNDAKVAKVLVEVNFKEGNMDA 730

Query: 521 AIQVLELMISSRYKPDDTVFST 542
            + VL  M      PD  + S+
Sbjct: 731 VLNVLTEMAKDGLLPDGGIHSS 752


>gi|359488005|ref|XP_002263693.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 586

 Score =  239 bits (610), Expect = 3e-60,   Method: Compositional matrix adjust.
 Identities = 140/454 (30%), Positives = 233/454 (51%), Gaps = 5/454 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N ++ +FC   +L  A  ++  + +    PD      LIRGL    +I  A 
Sbjct: 100 IPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGKIGDAL 159

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M+  G  P+ +TY  ++ GLCK G   +AI LL  M    C+PDV+ Y +I+ ++
Sbjct: 160 HLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSL 219

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   +   + +G  P + TYT LI  +C  C       +L+ M      PD+
Sbjct: 220 CKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDV 279

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL--HSLGSRGCWDAVDKIL 350
           V ++++V+  CK+GK  +A  V++ ++ RG+EPN +TYN L+  H L S    D   K+ 
Sbjct: 280 VIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSE--MDEAVKVF 337

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           D M    ++P V +YN LING CK   +D+A   F +M  K   P+ VTYNT++   C  
Sbjct: 338 DTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLMHX-CHV 396

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G L +A+ L H +      P L TY  L+D L KK  +++AM L   +  + + PD   +
Sbjct: 397 GRLQDAIALFHEMVAHGQIPDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIY 456

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             +I G CRA ++E A D+   +  +G +     Y ++I+GLC+   +D A ++   M  
Sbjct: 457 TIVIDGMCRAGELEAARDIFSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDG 516

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +   PD   ++TI + +  +     A +L Q+++
Sbjct: 517 NGCSPDGCTYNTITQGLLQNKEALRAIQLLQEML 550



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 107/414 (25%), Positives = 202/414 (48%), Gaps = 36/414 (8%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P T+ +N ++  + K  Q  +  +L ++M   G  PDV T N ++ +     +   A   
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
               L+ G  P   T+T LI  +C +  I  A+ + D M  EG  P++VTY +L+N  CK
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 305 QGKYDDAVLVIN-------------------------------NLLSR----GMEPNSIT 329
            G  + A+ ++                                NL S+    G+ P+  T
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y +L+HSL +   W  V  +L+ M  +   P V  ++ +++ LCK G +  A +  + M+
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +  +P++VTYN ++   C +  ++EA+++   +  +  +P +I+YNTLI+G  K   M+
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 366

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KA  L+ +M +  + P+ +T+ TL+   C   ++++A+ L  E+   G     + YR+++
Sbjct: 367 KATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMVAHGQIPDLATYRILL 425

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             LCK   +D A+ +L+ +  S   PD  +++ ++  +   G  E A  ++  L
Sbjct: 426 DYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNL 479



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 91/345 (26%), Positives = 169/345 (48%), Gaps = 1/345 (0%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P  + +N +L ++    ++             G PP + T  ILI   C    +  A  V
Sbjct: 67  PSTVDFNRLLTSIAKTKQYPTVFSLSNQMDSFGIPPDVYTLNILINSFCHLNRLGFAFSV 126

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L  +   G  PD  T+ +L+   C +GK  DA+ + + ++  G +PN +TY TL++ L  
Sbjct: 127 LAKILKLGHQPDTATFTTLIRGLCVEGKIGDALHLFDKMIGEGFQPNVVTYGTLINGLCK 186

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G  +A  ++L  M + +  P V  Y  +I+ LCK   V  A N F++MV +   PDI T
Sbjct: 187 VGNTNAAIRLLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTEAFNLFSKMVGQGISPDIFT 246

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y +++ +LC          LL+ +  S   P ++ ++T++D L K+G + +A  +   M+
Sbjct: 247 YTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKITEAHDVVDMMI 306

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
             G+ P+ +T+  L+ G C   +++EAV +   +   G      +Y  +I+G CK +++D
Sbjct: 307 IRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLINGYCKIQRMD 366

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            A  + E M      P+   ++T++      G  ++A  L+ +++
Sbjct: 367 KATYLFEEMCQKELIPNTVTYNTLMHX-CHVGRLQDAIALFHEMV 410



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 90/352 (25%), Positives = 160/352 (45%)

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           +++N       +      A+  +   L    PP  + +  L+  + K         + + 
Sbjct: 35  LSHNRFHSKSLNFNTLDDALSSFNRMLHMHPPPSTVDFNRLLTSIAKTKQYPTVFSLSNQ 94

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G  PD+ T N L+N  C   +   A  V+  +L  G +P++ T+ TL+  L   G 
Sbjct: 95  MDSFGIPPDVYTLNILINSFCHLNRLGFAFSVLAKILKLGHQPDTATFTTLIRGLCVEGK 154

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                 + D M      P V TY  LINGLCK G  + AI     M   NCQPD+V Y +
Sbjct: 155 IGDALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTNAAIRLLRSMEQGNCQPDVVVYTS 214

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++ +LCK+  + EA  L   + G   SP + TY +LI  L      +    L  QM+ + 
Sbjct: 215 IIDSLCKDRQVTEAFNLFSKMVGQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSK 274

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           I PD +   T++   C+  ++ EA D++  +  RG +     Y  ++ G C   ++D A+
Sbjct: 275 IMPDVVIFSTVVDALCKEGKITEAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAV 334

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +V + M+ + Y P+   ++T++         ++A  L++++ + ++     T
Sbjct: 335 KVFDTMVHNGYAPNVISYNTLINGYCKIQRMDKATYLFEEMCQKELIPNTVT 386



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/333 (26%), Positives = 161/333 (48%), Gaps = 1/333 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T   ++ + C+  +    + L++ M     +PD      ++  L +  +I 
Sbjct: 237 GQGISPDIFTYTSLIHSLCNLCEWKHVTTLLNQMINSKIMPDVVIFSTVVDALCKEGKIT 296

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A  V+ +M++ G  P+ +TYN ++ G C + ++  A+ + D M  +G  P+VI+YNT++
Sbjct: 297 EAHDVVDMMIIRGVEPNVVTYNALMDGHCLQSEMDEAVKVFDTMVHNGYAPNVISYNTLI 356

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                  +  +A   +++  +K   P  +TY  L+   C    +  AI +  +M   G  
Sbjct: 357 NGYCKIQRMDKATYLFEEMCQKELIPNTVTYNTLM-HXCHVGRLQDAIALFHEMVAHGQI 415

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD+ TY  L+++ CK+   D+A+ ++  +    M+P+   Y  ++  +   G  +A   I
Sbjct: 416 PDLATYRILLDYLCKKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDI 475

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              ++     P V TY I+INGLC+ GL+D A   F +M    C PD  TYNT+   L +
Sbjct: 476 FSNLSSKGLRPNVRTYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQ 535

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                 A+QLL  +     S  + T   L++ L
Sbjct: 536 NKEALRAIQLLQEMLARGFSADVSTTTLLVEML 568



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 5/149 (3%)

Query: 98  KKSH-DPS---LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH 153
           KKSH D +   L + +G  ++ D +    ++   C  G+L  A  +   ++ +   P+  
Sbjct: 430 KKSHLDEAMALLKTIEGSNMDPDIQIYTIVIDGMCRAGELEAARDIFSNLSSKGLRPNVR 489

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
               +I GL R   +++A+K+   M  +G  PD  TYN +  GL +  +   AI LL EM
Sbjct: 490 TYTIMINGLCRRGLLDEANKLFMEMDGNGCSPDGCTYNTITQGLLQNKEALRAIQLLQEM 549

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              G   DV T  T+L  M  + K  Q++
Sbjct: 550 LARGFSADVST-TTLLVEMLCDDKLDQSV 577


>gi|226493231|ref|NP_001140656.1| hypothetical protein [Zea mays]
 gi|194700420|gb|ACF84294.1| unknown [Zea mays]
 gi|414587025|tpg|DAA37596.1| TPA: hypothetical protein ZEAMMB73_567962 [Zea mays]
          Length = 598

 Score =  239 bits (609), Expect = 4e-60,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 251/483 (51%), Gaps = 37/483 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N+++++ C RG+  DA+++++          +     L+ G  R   +E A +V+  M  
Sbjct: 100 NRLVRDLCRRGRPADAARVVEACGPEATAATYGA---LVDGYCRAGLLEDARRVVGGMPA 156

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
                    +N ++  LC+RG++  A+ +LD M   GC PDV+TYN +L+       ++Q
Sbjct: 157 HVQASSAYAHNPLIHALCERGRVADALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQ 216

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+        +GC P  +TY ++I+ +C++  + +A E+L+ +   GC P+ V YN+++ 
Sbjct: 217 ALELIDFMRAEGCEPNNVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLK 276

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C   ++ DA  +++ ++     PN  T N ++++L  +G    V   L+ M++   + 
Sbjct: 277 GFCSIERWVDADEILDEMVRENCPPNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTA 336

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN +I+G+C+ G VD A+   + M S  C+PDIVTYNTVL  LC      +A +L+
Sbjct: 337 NVVTYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELM 396

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++ +   P   T+NT+I    +KG + +A  ++ QM E G +P+  T+ T+I G  +A
Sbjct: 397 IKMSQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKA 456

Query: 481 DQVEEAVDLLKEIGKRG---------------------------NKMRNSA-------YR 506
            ++E+A++LL E+  +G                           +K+++S        Y 
Sbjct: 457 GKMEQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYN 516

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            V+ GLC++ K D AI VL  M+S    PD++ +  +++ +  +G ++EA +L  +L   
Sbjct: 517 TVLLGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSR 576

Query: 567 KVF 569
            V 
Sbjct: 577 DVL 579



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/474 (28%), Positives = 233/474 (49%), Gaps = 43/474 (9%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           GP  E    T   ++  +C  G L DA +++  M    Q    +    LI  L    R+ 
Sbjct: 123 GP--EATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVA 180

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A  VL  M+  G  PD +TYN+++   CK    R A+ L+D M   GCEP+ +TYN I+
Sbjct: 181 DALVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALELIDFMRAEGCEPNNVTYNVII 240

Query: 230 RTMFDNGKFKQA----------------------------IGFWKDQ-------LRKGCP 254
             M   G   QA                            I  W D        +R+ CP
Sbjct: 241 DAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCP 300

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P   T  ++I  +C++  + +    L+ M+  GC+ ++VTYN++++  C+QG  D A+ +
Sbjct: 301 PNEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALEL 360

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           ++N+ S G +P+ +TYNT+L  L S   W+  ++++  M++    P   T+N +I+  C+
Sbjct: 361 LSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQ 420

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            GL+ +A   F QM  K C P+  TY+T++G L K G + +AL+LL+ +     +   + 
Sbjct: 421 KGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKMEQALELLNEMANKGFNTDKM- 479

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y  L + L K+  +E+ + +  ++ ++GISP  + + T++ G CR  + + A+D+L ++ 
Sbjct: 480 YRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVLLGLCRNGKTDYAIDVLADMV 539

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
             G     S Y ++I GL        A ++L     SR    D + ++++K  A
Sbjct: 540 SCGCMPDESTYIILIEGLFYEGYSKEARELL-----SRLCSRDVLSNSLIKNEA 588



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 104/384 (27%), Positives = 194/384 (50%), Gaps = 12/384 (3%)

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
           +  L  RG + +A+ L+     S   PDV   N ++R +   G+   A      ++ + C
Sbjct: 71  LSALIHRGDLDAALRLVGS---SPRPPDVPLANRLVRDLCRRGRPADAA-----RVVEAC 122

Query: 254 PPYLI--TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
            P     TY  L++  C+   +  A  V+  M     +     +N L++  C++G+  DA
Sbjct: 123 GPEATAATYGALVDGYCRAGLLEDARRVVGGMPAHVQASSAYAHNPLIHALCERGRVADA 182

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           ++V++ +L RG  P+ +TYN LL +    RG   A++ ++D M      P   TYN++I+
Sbjct: 183 LVVLDGMLCRGCAPDVVTYNILLQAACKGRGYRQALE-LIDFMRAEGCEPNNVTYNVIID 241

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
            +C+ G VD+A    N + S+ C+P+ V YNTVL   C      +A ++L  +   +C P
Sbjct: 242 AMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGFCSIERWVDADEILDEMVRENCPP 301

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
              T N +I+ L +KG ++K  +   +M ++G + + +T+  +I G C    V+ A++LL
Sbjct: 302 NEATLNVIINTLCRKGLLQKVTLYLEKMSKHGCTANVVTYNAVISGMCEQGNVDSALELL 361

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
             +   G K     Y  V+ GLC + + + A +++  M  +   PD++ F+TI+      
Sbjct: 362 SNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKMSQNDRLPDNSTFNTIISFWCQK 421

Query: 551 GMTEEAYKLWQKLIEWKVFEKGTT 574
           G+  +A+++++++ E       TT
Sbjct: 422 GLILQAFEVFKQMPEKGCNPNSTT 445



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 65/250 (26%), Positives = 109/250 (43%), Gaps = 34/250 (13%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C +G +  A +L+  M      PD      +++GL   DR E A +++  M
Sbjct: 340 TYNAVISGMCEQGNVDSALELLSNMQSFGCKPDIVTYNTVLKGLCSADRWEDAEELMIKM 399

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +  +PD  T+N ++   C++G I  A  +  +M   GC P+  TY+TI+  +   GK 
Sbjct: 400 SQNDRLPDNSTFNTIISFWCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLTKAGKM 459

Query: 239 KQAI---------GFWKDQLRK-------------------------GCPPYLITYTILI 264
           +QA+         GF  D++ +                         G  P  + Y  ++
Sbjct: 460 EQALELLNEMANKGFNTDKMYRVLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLYNTVL 519

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             +C+      AI+VL DM   GC PD  TY  L+     +G   +A  +++ L SR + 
Sbjct: 520 LGLCRNGKTDYAIDVLADMVSCGCMPDESTYIILIEGLFYEGYSKEARELLSRLCSRDVL 579

Query: 325 PNSITYNTLL 334
            NS+  N  L
Sbjct: 580 SNSLIKNEAL 589


>gi|115454009|ref|NP_001050605.1| Os03g0597200 [Oryza sativa Japonica Group]
 gi|28875991|gb|AAO60000.1| putative pentatricopeptide repeat protein [Oryza sativa Japonica
           Group]
 gi|108709658|gb|ABF97453.1| DEAD/DEAH box helicase family protein, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113549076|dbj|BAF12519.1| Os03g0597200 [Oryza sativa Japonica Group]
          Length = 742

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 238/456 (52%), Gaps = 10/456 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    N +L       K+     +   M  R   PD      L++ L R  ++  A 
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ M   G  PD  T+  ++ G  + G I +A+ +   M   GC    +T N ++   
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+ + A+G+ + ++  G  P  ITY   +  +C+   +  A++V+D M  EG  PD+
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSRGCWDAVDKIL 350
            TYN +VN  CK G+ ++A  ++N ++ RG  P+  T+NTL+ +L  G+R     +++ L
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR-----LEEAL 376

Query: 351 DIMNEAS---HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           D+  + +    SP V+T+NILIN LCK G    A+  F +M +  C PD VTYNT++  L
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C  G L +AL LL  +  + C    ITYNT+IDGL KK  +E+A  ++ QM   GIS + 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           IT  TLI G C+  ++++A +L+ ++   G +  N  Y  ++   CK   +  A  +LE 
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M ++ ++ D   + T++  +   G T+ A K+ + +
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592



 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 232/448 (51%), Gaps = 1/448 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++ DA   I         PD       + GL + D +  A KV+ +M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD  TYN++V  LCK GQ+  A  +L++M   GC PD+ T+NT++  +    + 
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+   +    KG  P + T+ ILI  +CK      A+ + ++M   GC+PD VTYN+L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  GK   A+ ++ ++ S G   ++ITYNT++  L  +   +  +++ D M+    
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S    T+N LI+GLCK   +D A    NQM+S+  QP+ +TYN++L   CK+G + +A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +  +     ++TY TLI+GL K G  + A+ +   M   G+ P    +  ++    
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-SKKVDMAIQVLELMISSRYKPDD 537
           R + + +A+ L +E+ + G       Y++V  GLC+    +  A   +  M+   + P+ 
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 672

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + F  + + + + GM +   +  + ++E
Sbjct: 673 SSFRMLAEGLLNLGMDDYFIRAIEIIME 700



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 236/453 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N +++  C   ++  A  +++ M+ R   PD      L++G +    IE A 
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V   M+  G     +T N+++ G CK G++  A+  + +    G EPD ITYNT +  +
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N     A+      +++G  P + TY I++  +CK   +  A  +L+ M   GC PDI
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+N+L+   C   + ++A+ +   +  +G+ P+  T+N L+++L   G      ++ + 
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M  +  +P   TYN LI+ LC  G + +A++    M S  C    +TYNT++  LCK+  
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA ++   ++    S   IT+NTLIDGL K   ++ A  L  QM+  G+ P++IT+ +
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++  +C+   +++A D+L+ +   G ++    Y  +I+GLCK+ +  +A++VL  M    
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +P    ++ +++ +       +A  L++++ E
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 217/423 (51%), Gaps = 35/423 (8%)

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q+  + G   DT+ YN ++  L +  +++   ++  EM   G +PDV+T+NT+++ +   
Sbjct: 135 QLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + + A+   ++   +G  P   T+T L++   ++  I  A+ V   M   GCS   VT 
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK G+ +DA+  I   ++ G EP+ ITYNT ++ L          K++D+M +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             H P VFTYNI++N LCK G ++ A    NQMV + C PDI T+NT++ ALC    L E
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL L   +     SP + T+N LI+ L K G    A+ L+ +M  +G +PD++T+ TLI 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 476 GFCRADQVEEAVDLLKEIGKRG----------------NKMRNS---------------- 503
             C   ++ +A+DLLK++   G                 KMR                  
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 504 ---AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               +  +I GLCK KK+D A +++  MIS   +P++  +++I+      G  ++A  + 
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 561 QKL 563
           + +
Sbjct: 555 ETM 557



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 203/405 (50%), Gaps = 23/405 (5%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           + ++ HDP            D  T N ++   C  G+L +A  +++ M  R  +PD    
Sbjct: 312 MVQEGHDP------------DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
             LI  L   +R+E+A  + + + + G  PD  T+N+++  LCK G    A+ L +EM  
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
           SGC PD +TYNT++  +   GK  +A+   KD    GCP   ITY  +I+ +CK+  I  
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A EV D M ++G S + +T+N+L++  CK  K DDA  +IN ++S G++PN+ITYN++L 
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 539

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               +G       IL+ M        V TY  LINGLCK G    A+     M  K  +P
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC-MEKAMVL 454
               YN VL +L +   + +AL L   +      P  +TY  +  GL + G  +++A   
Sbjct: 600 TPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDF 659

Query: 455 YGQMMENGISPDDITHRTLIWG---------FCRA-DQVEEAVDL 489
             +M++ G  P+  + R L  G         F RA + + E VDL
Sbjct: 660 MLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL 704



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 187/382 (48%), Gaps = 2/382 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            P    Y  ++  L   G +     L+ EM   G +  +   ++ L +      F  A+ 
Sbjct: 71  APGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVD 130

Query: 244 FWKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +QL+   G     + Y  L+  + +   +     V  +M   G  PD+VT+N+L+  
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+  +   AVL++  + SRG+ P+  T+ TL+      G  +A  ++   M E   S T
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             T N+LING CK G V+ A+    Q ++   +PD +TYNT +  LC+   +  AL+++ 
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           ++      P + TYN +++ L K G +E+A  +  QM++ G  PD  T  TLI   C  +
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++EEA+DL +++  +G       + ++I+ LCK     +A+++ E M +S   PD+  ++
Sbjct: 371 RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
           T++  +   G   +A  L + +
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDM 452



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 157/317 (49%), Gaps = 41/317 (12%)

Query: 265 EQVCKQCGIARAIEVLD----DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           E++ ++ G   A++++     +M  EG    +   +S ++    Q  +DDAV +I N L 
Sbjct: 78  EEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQ 137

Query: 321 R--GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G++ +++ YN LL                               N+L+ G  K  L+
Sbjct: 138 PLFGIQADTVVYNHLL-------------------------------NVLVEG-SKMKLL 165

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           +   + +++M ++  +PD+VT+NT++ ALC+   +  A+ +L  ++    +P   T+ TL
Sbjct: 166 E---SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 222

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           + G  ++G +E A+ +  +M+E G S   +T   LI G+C+  +VE+A+  +++    G 
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGF 282

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +     Y   ++GLC++  V  A++V+++M+   + PD   ++ +V  +  +G  EEA  
Sbjct: 283 EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKG 342

Query: 559 LWQKLIEWKVFEKGTTL 575
           +  ++++       TT 
Sbjct: 343 ILNQMVDRGCLPDITTF 359


>gi|414592066|tpg|DAA42637.1| TPA: hypothetical protein ZEAMMB73_021738 [Zea mays]
          Length = 768

 Score =  238 bits (608), Expect = 5e-60,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 234/450 (52%), Gaps = 1/450 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  ++  C  G+L +A  L++ M      PD      L+RGL +  ++++A++ L  M
Sbjct: 248 TCNIWIRGLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRM 306

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G +PD  TYN ++ G CK G ++ A  LL +    G  PD +TY +++  +   G  
Sbjct: 307 MNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDI 366

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+  + +   K   P L+ Y  L++ +C+Q  I  A++V+++M  EGC PDI TYN +
Sbjct: 367 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNII 426

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G   DA +V+N+ + +G  P+  T+NTL+     R   D+  ++++ M     
Sbjct: 427 INGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGI 486

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V TYN ++NGLCK G       +F +M+ K C+P+ +TYN ++   CK   L EA  
Sbjct: 487 APDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASG 546

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  +      P  +++NTLI G  + G ++ A +L+ ++ E G S    T   LI  + 
Sbjct: 547 VIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYS 606

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
               ++ A  +  E+  +G K     YR+++ GLCK+  VD A   L  MIS  + P   
Sbjct: 607 SKLNMQMAEKIFGEMISKGYKPDLYTYRILVDGLCKAANVDRAYAHLAEMISKGFVPSMA 666

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            F  ++  +A +    EA  +   ++   V
Sbjct: 667 TFGRMLNLLAMNHRVSEAVAIIHIMVRMGV 696



 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 142/452 (31%), Positives = 230/452 (50%), Gaps = 7/452 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C +G + ++  L+  + +R    +   C   IRGL    R+E+A  ++
Sbjct: 210 DVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALV 269

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +   PD +TYN ++ GLCK  +++ A   L  M   GC PD  TYNTI+     +
Sbjct: 270 ERM-GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKS 328

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++A    KD + KG  P  +TY  LI  +C +  I RA+E+ ++   +   PD+V Y
Sbjct: 329 GMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVY 388

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NSLV   C+QG    A+ V+N ++  G  P+  TYN +++ L   G    +     +MN+
Sbjct: 389 NSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMG---NISDAAVVMND 445

Query: 356 A---SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           A    + P VFT+N LI+G CK   +D A+    +M +    PD++TYN+VL  LCK G 
Sbjct: 446 AIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGK 505

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             E  +    +    C P  ITYN LI+   K   +E+A  +  +M ++G+ PD ++  T
Sbjct: 506 AKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNT 565

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI GFCR   ++ A  L +++ ++G       + ++I        + MA ++   MIS  
Sbjct: 566 LIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKG 625

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           YKPD   +  +V  +      + AY    ++I
Sbjct: 626 YKPDLYTYRILVDGLCKAANVDRAYAHLAEMI 657



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/464 (28%), Positives = 241/464 (51%), Gaps = 5/464 (1%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G +V  D  T N +++  C   K+ +A++ +  M  +  IPD      +I G  +   ++
Sbjct: 273 GAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQ 332

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A+++L+  V  G VPD +TY  ++ GLC  G I  A+ L +E      +PD++ YN+++
Sbjct: 333 EATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLV 392

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           + +   G    A+    + + +GC P + TY I+I  +CK   I+ A  V++D  ++G  
Sbjct: 393 KGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYL 452

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD+ T+N+L++  CK+ K D A+ ++  + + G+ P+ ITYN++L+ L   G    V++ 
Sbjct: 453 PDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVLNGLCKAGKAKEVNET 512

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            + M      P   TYNILI   CK   ++ A     +M      PD V++NT++   C+
Sbjct: 513 FEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMCQDGLVPDAVSFNTLIHGFCR 572

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G L+ A  L   L+    S    T+N LI   + K  M+ A  ++G+M+  G  PD  T
Sbjct: 573 NGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGYKPDLYT 632

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +R L+ G C+A  V+ A   L E+  +G     + +  +++ L  + +V  A+ ++ +M+
Sbjct: 633 YRILVDGLCKAANVDRAYAHLAEMISKGFVPSMATFGRMLNLLAMNHRVSEAVAIIHIMV 692

Query: 530 SSRYKPD--DTVFSTIVKKVADDG-MTEEAYKLWQKLIEWKVFE 570
                P+  DT+ ST  K++A    + EE  K  +  I ++ +E
Sbjct: 693 RMGVVPEVVDTILSTDKKEIAAPKILVEELMK--KGHISYRAYE 734



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 234/442 (52%), Gaps = 1/442 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++   + G   +A  L D M  R+  PD     N++  L +   + ++  +L  ++  G
Sbjct: 182 VVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRG 241

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T N+ + GLC+ G++  A+AL++ M  +   PDV+TYNT++R +  + K ++A 
Sbjct: 242 MSANKFTCNIWIRGLCEDGRLEEAVALVERMG-AYVAPDVVTYNTLMRGLCKDSKVQEAA 300

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            +    + +GC P   TY  +I+  CK   +  A E+L D   +G  PD VTY SL+N  
Sbjct: 301 QYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGL 360

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +G  + A+ + N   ++ ++P+ + YN+L+  L  +G      ++++ M E    P +
Sbjct: 361 CAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDI 420

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TYNI+INGLCK G +  A    N  + K   PD+ T+NT++   CK   L+ ALQL+  
Sbjct: 421 WTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVER 480

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P +ITYN++++GL K G  ++    + +M+  G  P+ IT+  LI  FC+ +Q
Sbjct: 481 MWTYGIAPDVITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 540

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +EEA  ++  + + G      ++  +IHG C++  +D A  + + +    Y      F+ 
Sbjct: 541 LEEASGVIVRMCQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 600

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           ++   +     + A K++ ++I
Sbjct: 601 LIGAYSSKLNMQMAEKIFGEMI 622



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 241/457 (52%), Gaps = 9/457 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKA 171
           V  D +T+   L++FC  G+   A +L+  ++ R        +C  ++RGL        A
Sbjct: 137 VAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYC-TVVRGLYAHGHGYNA 195

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M+     PD  T+N ++  LC++G +  + ALL ++   G   +  T N  +R 
Sbjct: 196 RHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRG 255

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           + ++G+ ++A+    +++     P ++TY  L+  +CK   +  A + L  M  +GC PD
Sbjct: 256 LCEDGRLEEAVALV-ERMGAYVAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPD 314

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
             TYN++++  CK G   +A  ++ + + +G  P+ +TY +L++ L + G    +++ L+
Sbjct: 315 DFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEG---DIERALE 371

Query: 352 IMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + NEA      P +  YN L+ GLC+ GL+  A+   N+MV + C PDI TYN ++  LC
Sbjct: 372 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLC 431

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G +++A  +++        P + T+NTLIDG  K+  ++ A+ L  +M   GI+PD I
Sbjct: 432 KMGNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVI 491

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +++ G C+A + +E  +  +E+  +G +     Y ++I   CK  +++ A  V+  M
Sbjct: 492 TYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 551

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                 PD   F+T++     +G  + AY L+QKL E
Sbjct: 552 CQDGLVPDAVSFNTLIHGFCRNGDLDGAYLLFQKLDE 588



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 216/444 (48%), Gaps = 7/444 (1%)

Query: 124 LQNFCSRGKL---TDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +Q +   G+L    DA + +D+ A     P ++    ++  L+     ++A KV   M+ 
Sbjct: 78  IQAYARAGRLRAAVDAFERMDLFACPPAAPAYN---AIMDALVNAAYHDQAHKVYVRMLA 134

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PD  T+ + +   C  G+   A+ LL  +S  GC+     Y T++R ++ +G    
Sbjct: 135 AGVAPDARTHTVRLKSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYN 194

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + L +   P + T+  ++  +C++  +  +  +L  +   G S +  T N  + 
Sbjct: 195 ARHLFDEMLGRDVFPDVATFNNVLHALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIR 254

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ G+ ++AV ++  + +  + P+ +TYNTL+  L          + L  M      P
Sbjct: 255 GLCEDGRLEEAVALVERMGAY-VAPDVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIP 313

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             FTYN +I+G CK G++  A       V K   PD VTY +++  LC EG +  AL+L 
Sbjct: 314 DDFTYNTIIDGYCKSGMLQEATELLKDAVFKGFVPDRVTYCSLINGLCAEGDIERALELF 373

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           +        P L+ YN+L+ GL ++G +  A+ +  +M+E G  PD  T+  +I G C+ 
Sbjct: 374 NEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKM 433

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             + +A  ++ +   +G       +  +I G CK  K+D A+Q++E M +    PD   +
Sbjct: 434 GNISDAAVVMNDAIVKGYLPDVFTFNTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITY 493

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           ++++  +   G  +E  + ++++I
Sbjct: 494 NSVLNGLCKAGKAKEVNETFEEMI 517



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/459 (25%), Positives = 203/459 (44%), Gaps = 43/459 (9%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT--YNMMVGGLCKRGQIRSAIALLDEMSV 215
           LIR L+   R++     L     S   PD++   Y   +    + G++R+A+   + M +
Sbjct: 41  LIRELVSAGRLDDVDAALA-SARSHLAPDSLQPLYVASIQAYARAGRLRAAVDAFERMDL 99

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC------- 268
             C P    YN I+  + +     QA   +   L  G  P   T+T+ ++  C       
Sbjct: 100 FACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRLKSFCLTGRPHV 159

Query: 269 ------------------KQCGIARAI----------EVLDDMAIEGCSPDIVTYNSLVN 300
                               C + R +           + D+M      PD+ T+N++++
Sbjct: 160 ALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVFPDVATFNNVLH 219

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C++G   ++  ++  +L RGM  N  T N  +  L   G  +    +++ M  A  +P
Sbjct: 220 ALCQKGDVMESGALLAKVLKRGMSANKFTCNIWIRGLCEDGRLEEAVALVERMG-AYVAP 278

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN L+ GLCK   V  A     +M+++ C PD  TYNT++   CK GML EA +LL
Sbjct: 279 DVVTYNTLMRGLCKDSKVQEAAQYLGRMMNQGCIPDDFTYNTIIDGYCKSGMLQEATELL 338

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
                    P  +TY +LI+GL  +G +E+A+ L+ +     + PD + + +L+ G CR 
Sbjct: 339 KDAVFKGFVPDRVTYCSLINGLCAEGDIERALELFNEAQAKDLKPDLVVYNSLVKGLCRQ 398

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             +  A+ ++ E+ + G       Y ++I+GLCK   +  A  V+   I   Y PD   F
Sbjct: 399 GLILHALQVMNEMVEEGCHPDIWTYNIIINGLCKMGNISDAAVVMNDAIVKGYLPDVFTF 458

Query: 541 STIV----KKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +T++    K++  D   +   ++W   I   V    + L
Sbjct: 459 NTLIDGYCKRLKLDSALQLVERMWTYGIAPDVITYNSVL 497



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 93/211 (44%), Gaps = 7/211 (3%)

Query: 359 SPTVFTYNILINGLCKYGL---VDRAINSF-NQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           + T+  Y  LI  L   G    VD A+ S  + +   + QP    Y   + A  + G L 
Sbjct: 32  ASTIPAYRALIRELVSAGRLDDVDAALASARSHLAPDSLQP---LYVASIQAYARAGRLR 88

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A+     ++  +C P    YN ++D L      ++A  +Y +M+  G++PD  TH   +
Sbjct: 89  AAVDAFERMDLFACPPAAPAYNAIMDALVNAAYHDQAHKVYVRMLAAGVAPDARTHTVRL 148

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             FC   +   A+ LL+ + +RG   + +AY  V+ GL        A  + + M+     
Sbjct: 149 KSFCLTGRPHVALRLLRSLSERGCDAKPAAYCTVVRGLYAHGHGYNARHLFDEMLGRDVF 208

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   F+ ++  +   G   E+  L  K+++
Sbjct: 209 PDVATFNNVLHALCQKGDVMESGALLAKVLK 239


>gi|224125496|ref|XP_002319601.1| predicted protein [Populus trichocarpa]
 gi|222857977|gb|EEE95524.1| predicted protein [Populus trichocarpa]
          Length = 460

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 130/422 (30%), Positives = 214/422 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   CS+ K+ DA KL D M +    PD      +I GL ++     A ++L+ M
Sbjct: 12  TFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKM 71

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ + YN ++  LCK   +  A+    EM   G  PDV TY++IL    + G+ 
Sbjct: 72  EEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRV 131

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +K  + +   P  +T+TILI+ +CK+  I+ A  V + M  +G  PD+ TYN+L
Sbjct: 132 NEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNAL 191

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  C + + D+A  + N +  +G  PN  +YN L++     G  D    +L  M+  S 
Sbjct: 192 VDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSL 251

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P +FTY+ L+ G C+ G    A     +M S    P+++TY+ VL  LCK G L+EA +
Sbjct: 252 TPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFE 311

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +  S   P +  Y  LI+G+   G +E A  L+  +   GI P  +T+  +I G  
Sbjct: 312 LLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLL 371

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +     EA +L +E+   G    +  Y ++I G  ++     A++++E M+   +  D +
Sbjct: 372 KGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSS 431

Query: 539 VF 540
            F
Sbjct: 432 TF 433



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 128/407 (31%), Positives = 213/407 (52%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+ GL    +I  A K+   MV  G  PD ITY+ ++ GLCK G    A+ LL +M   G
Sbjct: 16  LLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQLLKKMEEKG 75

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+P+V+ YNTI+ ++  +    +A+ F+ + +++G PP + TY+ ++   C    +  A 
Sbjct: 76  CKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEAT 135

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +   M      P+ VT+  L++  CK+    +A LV   +  +G+EP+  TYN L+   
Sbjct: 136 SLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGY 195

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            SR   D   K+ +IM+    +P V +YNILING CK G +D A     +M  K+  PDI
Sbjct: 196 CSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDI 255

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            TY+T++   C+ G   EA +LL  +      P LITY+ ++DGL K G +++A  L   
Sbjct: 256 FTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKA 315

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M E+ I P+   +  LI G C   ++E A +L   +  +G +     Y ++I GL K   
Sbjct: 316 MQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGL 375

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            + A ++   M  +   P+   ++ I++    +G T  A +L ++++
Sbjct: 376 SNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMV 422



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 113/386 (29%), Positives = 205/386 (53%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P  +T+N ++ GLC + +I  A+ L DEM   G EPDVITY+TI+  +   G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A+   K    KGC P ++ Y  +I+ +CK   +  A++   +M  EG  PD+ TY+S
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  C  G+ ++A  +   ++ R + PN +T+  L+  L  +        + + M E  
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V+TYN L++G C    +D A   FN M  K C P++ +YN ++   CK G ++EA 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            LL  ++  S +P + TY+TL+ G  + G  ++A  L  +M   G+ P+ IT+  ++ G 
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+   ++EA +LLK + +   +     Y ++I G+C   K++ A ++   +     +P  
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
             ++ ++  +   G++ EA +L++++
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREM 386



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/353 (31%), Positives = 181/353 (51%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ + C    +T+A      M +    PD     +++ G   + R+ +A+ + + MV 
Sbjct: 84  NTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCNLGRVNEATSLFKQMVE 143

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
              +P+ +T+ +++ GLCK+  I  A  + + M+  G EPDV TYN ++       +  +
Sbjct: 144 RNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPDVYTYNALVDGYCSRSQMDE 203

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   +    RKGC P + +Y ILI   CK   I  A  +L +M+ +  +PDI TY++L+ 
Sbjct: 204 AQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLAEMSHKSLTPDIFTYSTLMR 263

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ G+  +A  ++  + S G+ PN ITY+ +L  L   G  D   ++L  M E+   P
Sbjct: 264 GFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGLCKHGHLDEAFELLKAMQESKIEP 323

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +F Y ILI G+C +G ++ A   F+ +  K  QP +VTY  ++  L K G+ NEA +L 
Sbjct: 324 NIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTVVTYTVMISGLLKGGLSNEACELF 383

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             +  + C P   TYN +I G  + G    A+ L  +M+  G S D  T R L
Sbjct: 384 REMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEEMVGKGFSADSSTFRML 436



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 100/352 (28%), Positives = 183/352 (51%), Gaps = 37/352 (10%)

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
            + G  P L+T+  L+  +C +  I  A+++ D+M   G  PD++TY++++N  CK G  
Sbjct: 2   FKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNT 61

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
             A+ ++  +  +G +PN + YNT++ SL   R   +A+D   +++ E    P VFTY+ 
Sbjct: 62  TMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGI-PPDVFTYSS 120

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNC---------------------------------- 393
           +++G C  G V+ A + F QMV +N                                   
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKG 180

Query: 394 -QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
            +PD+ TYN ++   C    ++EA +L ++++   C+P + +YN LI+G  K G +++A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  +M    ++PD  T+ TL+ GFC+  + +EA +LLKE+   G       Y +V+ GL
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           CK   +D A ++L+ M  S+ +P+  +++ +++ +   G  E A +L+  L 
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLF 352



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 90/280 (32%), Positives = 154/280 (55%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G  P +VT+N+L++  C + K  DAV + + ++  G EP+ ITY+T+++ L   G     
Sbjct: 5   GLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMA 64

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            ++L  M E    P V  YN +I+ LCK  LV  A++ F++MV +   PD+ TY+++L  
Sbjct: 65  LQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHG 124

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            C  G +NEA  L   +   +  P  +T+  LIDGL KK  + +A +++  M E G+ PD
Sbjct: 125 FCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTEKGLEPD 184

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             T+  L+ G+C   Q++EA  L   + ++G      +Y ++I+G CKS ++D A  +L 
Sbjct: 185 VYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAKGLLA 244

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            M      PD   +ST+++     G  +EA +L +++  +
Sbjct: 245 EMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSY 284



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 158/325 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + IL  FC+ G++ +A+ L   M  RN IP+      LI GL +   I +A  V 
Sbjct: 114 DVFTYSSILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVF 173

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD  TYN +V G C R Q+  A  L + M   GC P+V +YN ++     +
Sbjct: 174 ETMTEKGLEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKS 233

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A G   +   K   P + TY+ L+   C+      A E+L +M   G  P+++TY
Sbjct: 234 GRIDEAKGLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITY 293

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + +++  CK G  D+A  ++  +    +EPN   Y  L+  + + G  +A  ++   +  
Sbjct: 294 SIVLDGLCKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFV 353

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               PTV TY ++I+GL K GL + A   F +M    C P+  TYN ++    + G    
Sbjct: 354 KGIQPTVVTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPN 413

Query: 416 ALQLLHLLNGSSCSPCLITYNTLID 440
           A++L+  + G   S    T+  L D
Sbjct: 414 AVRLIEEMVGKGFSADSSTFRMLSD 438



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 124/256 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T N ++  +CSR ++ +A KL +IM R+   P+      LI G  +  RI++A 
Sbjct: 181 LEPDVYTYNALVDGYCSRSQMDEAQKLFNIMDRKGCAPNVRSYNILINGHCKSGRIDEAK 240

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  M      PD  TY+ ++ G C+ G+ + A  LL EM   G  P++ITY+ +L  +
Sbjct: 241 GLLAEMSHKSLTPDIFTYSTLMRGFCQVGRPQEAQELLKEMCSYGLLPNLITYSIVLDGL 300

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G   +A    K        P +  YTILIE +C    +  A E+  ++ ++G  P +
Sbjct: 301 CKHGHLDEAFELLKAMQESKIEPNIFIYTILIEGMCTFGKLEAARELFSNLFVKGIQPTV 360

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  +++   K G  ++A  +   +   G  PNS TYN ++      G      ++++ 
Sbjct: 361 VTYTVMISGLLKGGLSNEACELFREMAVNGCLPNSCTYNVIIQGFLRNGDTPNAVRLIEE 420

Query: 353 MNEASHSPTVFTYNIL 368
           M     S    T+ +L
Sbjct: 421 MVGKGFSADSSTFRML 436



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 51/178 (28%), Positives = 90/178 (50%)

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M     QP +VT+NT+L  LC +  + +A++L   +      P +ITY+T+I+GL K G 
Sbjct: 1   MFKLGLQPTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGN 60

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
              A+ L  +M E G  P+ + + T+I   C+   V EA+D   E+ K G       Y  
Sbjct: 61  TTMALQLLKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSS 120

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++HG C   +V+ A  + + M+     P+   F+ ++  +    M  EA+ +++ + E
Sbjct: 121 ILHGFCNLGRVNEATSLFKQMVERNVIPNKVTFTILIDGLCKKRMISEAWLVFETMTE 178



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 47/146 (32%), Positives = 77/146 (52%)

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P L+T+NTL+ GL  K  +  A+ L+ +M++ G  PD IT+ T+I G C+      A+ L
Sbjct: 8   PTLVTFNTLLSGLCSKAKIMDAVKLFDEMVKMGHEPDVITYSTIINGLCKMGNTTMALQL 67

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           LK++ ++G K    AY  +I  LCK + V  A+     M+     PD   +S+I+    +
Sbjct: 68  LKKMEEKGCKPNVVAYNTIIDSLCKDRLVTEAMDFFSEMVKEGIPPDVFTYSSILHGFCN 127

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTTL 575
            G   EA  L+++++E  V     T 
Sbjct: 128 LGRVNEATSLFKQMVERNVIPNKVTF 153


>gi|326522214|dbj|BAK04235.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 966

 Score =  238 bits (607), Expect = 6e-60,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 230/455 (50%), Gaps = 18/455 (3%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  GK   A +++  M R+  +PD      +I  L +  R++KA  + Q M   G  PD
Sbjct: 427 LCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVGVNPD 486

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY +++   CK G I  A +  DEM  +GC P+V+TY  +L     + +  QA   + 
Sbjct: 487 VYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQANDIFH 546

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL-----------DDMAIEG-----CSP 290
             +   C P  ITY+ LI+ +CK   I +A EV             D   EG      SP
Sbjct: 547 RMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTDTISP 606

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           ++VTY +LVN  CK  K  DA  +++ +L+ G EPN I Y+ L+      G  D+  ++ 
Sbjct: 607 NVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVF 666

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M +  + P+V TY  LI+ + K G +D A+   +QM+  +C P++VTY  ++  LCK 
Sbjct: 667 LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKT 726

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G   +AL LL L+    CSP ++TY  LIDGL K G ++  + L+ QM   G +P+ +T+
Sbjct: 727 GETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTY 786

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           R LI   C A  +++A  LL E+ +         YR  + G   SK+   ++ +LE M S
Sbjct: 787 RILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGF--SKRFLASLGLLEEMES 844

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               P   V+  ++   +  G  E A +L ++++E
Sbjct: 845 HDTAPIAPVYGMLIDSFSKAGRLETALELHKEMME 879



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 224/472 (47%), Gaps = 25/472 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T     Q  C  G+  DA   +D++ R +   D   C  +I GL+      +A   L
Sbjct: 238 DRSTVGSFAQALCKEGRWGDA---LDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFL 294

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +  +P+ +TY  ++ G  K+ Q+     +++ M   GC P    +N+++ T  + 
Sbjct: 295 HRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNA 354

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR------AIEVLDDMAIEGCS 289
             +  A   +      GCPP  + Y I I  +C +  +        A +V ++M +  C 
Sbjct: 355 EDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCV 414

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            + +   +     C  GK++ A  ++  ++ +G  P++ TY  ++  L      D    +
Sbjct: 415 LNKINTANFARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLL 474

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M +   +P V+TY ILI+  CK GL+++A + F++M S  C P++VTY  +L A  K
Sbjct: 475 FQEMKKVGVNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLK 534

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM---------- 459
              L +A  + H + G +C P  ITY+ LIDGL K G ++KA  +Y +++          
Sbjct: 535 SKQLYQANDIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDF 594

Query: 460 ------ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
                  + ISP+ +T+  L+ G C+A +V +A DLL  +   G +     Y  ++ G C
Sbjct: 595 YFEGKDTDTISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFC 654

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K  ++D A +V   M    Y P    +++++ ++  DG  + A K+  ++++
Sbjct: 655 KVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 706



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 130/466 (27%), Positives = 201/466 (43%), Gaps = 56/466 (12%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   ++ +FC  G +  A    D M      P+      L+   ++  ++ +A+
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQAN 542

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM----------------SVS 216
            +   MV     P+ ITY+ ++ GLCK G+I+ A  +  ++                   
Sbjct: 543 DIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLIGTSDNIESDFYFEGKDTD 602

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
              P+V+TY  ++  +    K   A       L  GC P  I Y  L++  CK   I  A
Sbjct: 603 TISPNVVTYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSA 662

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            EV   M   G  P + TY SL++   K G+ D A+ V++ +L     PN +TY  ++  
Sbjct: 663 QEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDG 722

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G  +    +L +M +   SP V TY  LI+GL K G VD  +  F QM +K C P+
Sbjct: 723 LCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPN 782

Query: 397 IVTYNTVLGALCKEGMLN---------------------------------EALQLLHLL 423
            VTY  ++   C  G+L+                                  +L LL  +
Sbjct: 783 YVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKRFLASLGLLEEM 842

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-----NGISPDDITHRTLIWGFC 478
                +P    Y  LID  +K G +E A+ L+ +MME     N  S D   H +LI   C
Sbjct: 843 ESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKD--MHTSLIQALC 900

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
            + QVEEAV L  E+ +RG     SA+  ++ GL +  K + A+Q+
Sbjct: 901 LSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQL 946



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/349 (24%), Positives = 163/349 (46%), Gaps = 5/349 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C   K++DA  L+D M      P+      L+ G  ++  I+ A +V   M
Sbjct: 610 TYGALVNGLCKAQKVSDAHDLLDAMLAAGCEPNQIVYDALVDGFCKVGEIDSAQEVFLRM 669

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +P   TY  ++  + K G++  A+ +L +M    C P+V+TY  ++  +   G+ 
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCNPNVVTYTAMVDGLCKTGET 729

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+       +KGC P ++TYT LI+ + K   +   +E+   M  +GC+P+ VTY  L
Sbjct: 730 EKALNLLSLMEKKGCSPNVVTYTALIDGLGKAGKVDAGLELFMQMKTKGCAPNYVTYRIL 789

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C  G  DDA L+++ +           Y T +     R  + A   +L+ M     
Sbjct: 790 INHCCAAGLLDDAHLLLDEMKQTHWPKYLQGYRTTVQGFSKR--FLASLGLLEEMESHDT 847

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT---YNTVLGALCKEGMLNE 415
           +P    Y +LI+   K G ++ A+    +M+  +   ++ +   + +++ ALC    + E
Sbjct: 848 APIAPVYGMLIDSFSKAGRLETALELHKEMMEVSSSLNMASKDMHTSLIQALCLSSQVEE 907

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
           A+ L   +      P L  +  L+ GL ++    +A+ L   + + G++
Sbjct: 908 AVALYSEMRRRGIVPDLSAFVCLVKGLIERNKWNEALQLCYGICQEGVN 956



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 81/311 (26%), Positives = 143/311 (45%), Gaps = 5/311 (1%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E ++   + ++  FC  G++  A ++   M +   +P  H   +LI  + +  R++ A K
Sbjct: 640 EPNQIVYDALVDGFCKVGEIDSAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMK 699

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL  M+     P+ +TY  MV GLCK G+   A+ LL  M   GC P+V+TY  ++  + 
Sbjct: 700 VLSQMLKDSCNPNVVTYTAMVDGLCKTGETEKALNLLSLMEKKGCSPNVVTYTALIDGLG 759

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK    +  +     KGC P  +TY ILI   C    +  A  +LD+M        + 
Sbjct: 760 KAGKVDAGLELFMQMKTKGCAPNYVTYRILINHCCAAGLLDDAHLLLDEMKQTHWPKYLQ 819

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y + V    K  ++  ++ ++  + S    P +  Y  L+ S    G  +   ++   M
Sbjct: 820 GYRTTVQGFSK--RFLASLGLLEEMESHDTAPIAPVYGMLIDSFSKAGRLETALELHKEM 877

Query: 354 NEASHSPTVFTYNI---LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
            E S S  + + ++   LI  LC    V+ A+  +++M  +   PD+  +  ++  L + 
Sbjct: 878 MEVSSSLNMASKDMHTSLIQALCLSSQVEEAVALYSEMRRRGIVPDLSAFVCLVKGLIER 937

Query: 411 GMLNEALQLLH 421
              NEALQL +
Sbjct: 938 NKWNEALQLCY 948



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 87/402 (21%), Positives = 154/402 (38%), Gaps = 80/402 (19%)

Query: 243 GFWKDQLRK-------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G W + L +       G  P  +TY  L++ +     +  A  V  +M+  G   D  T 
Sbjct: 183 GLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTV 242

Query: 296 NSLVNFSCKQGKYDDAV------------LVINNLLSRGME------------------- 324
            S     CK+G++ DA+            ++   ++S  ME                   
Sbjct: 243 GSFAQALCKEGRWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSY 302

Query: 325 -PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN +TY TLL     +       +I+++M     +P+   +N L++  C       A  
Sbjct: 303 IPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYK 362

Query: 384 SFNQMVSKNCQPDIVTYNTVLGA------------------------------------- 406
            FN+M +  C P  V YN  +G+                                     
Sbjct: 363 LFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEMLVASCVLNKINTAN 422

Query: 407 ----LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
               LC  G   +A Q++  +      P   TY  +I  L +   ++KA +L+ +M + G
Sbjct: 423 FARCLCGVGKFEKAFQIVKEMMRKGFVPDASTYTKVITFLCQAKRVDKAFLLFQEMKKVG 482

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           ++PD  T+  LI  FC+A  +E+A     E+   G       Y  ++H   KSK++  A 
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQAQSWFDEMRSAGCSPNVVTYTALLHAYLKSKQLYQAN 542

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            +   M+     P+   +S ++  +   G  ++A +++ KLI
Sbjct: 543 DIFHRMVGDACYPNAITYSALIDGLCKAGEIQKACEVYAKLI 584



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/275 (22%), Positives = 121/275 (44%), Gaps = 9/275 (3%)

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N LV   C QG + +A+  +  L   G  P+++TYN L+  L S G  +   ++   M+ 
Sbjct: 173 NVLVRRCCLQGLWGEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSA 232

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +       T       LCK G   R  ++ + +  ++ + D V    ++  L +  + NE
Sbjct: 233 SGFCMDRSTVGSFAQALCKEG---RWGDALDLLEREDFKLDTVLCTQMISGLMEASLFNE 289

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+  LH +  +S  P ++TY TL+ G  KK  +     +   MM  G +P      +L+ 
Sbjct: 290 AMSFLHRMRCNSYIPNVVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVH 349

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK------VDMAIQVLELMI 529
            +C A+    A  L   +   G       Y + I  +C  ++      +D+A +V E M+
Sbjct: 350 TYCNAEDYAYAYKLFNRMNTCGCPPGYVVYNIFIGSICGREELPNPELLDLAEKVYEEML 409

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            +    +    +   + +   G  E+A+++ ++++
Sbjct: 410 VASCVLNKINTANFARCLCGVGKFEKAFQIVKEMM 444



 Score = 55.1 bits (131), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 48/242 (19%), Positives = 94/242 (38%), Gaps = 3/242 (1%)

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G +     Y+ L   LG        +++L  + E          N+L+   C  GL   A
Sbjct: 129 GYKHTGACYDALAEVLGFEDPARTAERLLREIGEDDRDVLGRLLNVLVRRCCLQGLWGEA 188

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +    ++     +P  VTYN ++  L   G +  A ++   ++ S       T  +    
Sbjct: 189 LEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMAFRVQKEMSASGFCMDRSTVGSFAQA 248

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L K+G    A+ L   +       D +    +I G   A    EA+  L  +        
Sbjct: 249 LCKEGRWGDALDL---LEREDFKLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSYIPN 305

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              YR ++ G  K K++    +++ +M++    P  ++F+++V    +      AYKL+ 
Sbjct: 306 VVTYRTLLTGFLKKKQLGWCKRIINMMMTEGCNPSPSLFNSLVHTYCNAEDYAYAYKLFN 365

Query: 562 KL 563
           ++
Sbjct: 366 RM 367


>gi|449453792|ref|XP_004144640.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 237/467 (50%), Gaps = 37/467 (7%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           +L DA   ++ M  + Q PD      L+  L +  ++ KA KV+++M+ SG +PD  +Y 
Sbjct: 77  RLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYT 136

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            +V  LC++G +  A+ L+D+M   G   +  TYN+++R +  +G   Q++      ++K
Sbjct: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQK 196

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P   TY+ L+E   K+ G   A ++LD++  +G  P++V+YN L+   CK+G+ +DA
Sbjct: 197 GLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDA 256

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + +   L S+G  PN ++YN LL SL + G W+  + +L  M+    SP+  TYNILI  
Sbjct: 257 MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 316

Query: 372 -----------------------------------LCKYGLVDRAINSFNQMVSKNCQPD 396
                                              LCK   VD  +   +QM+ ++C P+
Sbjct: 317 LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 376

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             TYN +   LC+EGM+ EA  ++  L           Y  +I  L +KG    A  L  
Sbjct: 377 EGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLY 435

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M + G +PD  T+ +LI G C    + EA+++   + +   K+    Y  +I G CKS+
Sbjct: 436 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFS-VMEENIKLDTENYNSLILGCCKSR 494

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + D+A+ V E+M+   Y  ++T ++ +V+ +  +   + A ++ ++L
Sbjct: 495 RTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLREL 541



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 201/433 (46%), Gaps = 39/433 (9%)

Query: 172 SKVLQIMVMSGGVPDTITY--NMMVGGL---CKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           SKVL    ++    DTI    N  +G L    K  ++  A   L+ M   G +PDV    
Sbjct: 42  SKVLASTQITISPKDTIFTLPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQAT 101

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            +L  +    K ++AI   +  +  G  P   +YT L+  +C++  +  A++++D M   
Sbjct: 102 QLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEY 161

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G   +  TYNSLV   C  G    ++ +++ L+ +G+ PN+ TY+ LL +       D  
Sbjct: 162 GYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA 221

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            K+LD +      P + +YN+L+ GLCK G  + A+  F ++ SK   P++V+YN +L +
Sbjct: 222 SKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRS 281

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LC EG   EA  LL  ++G   SP  +TYN LI  L   G  E A+ +  +M+     P 
Sbjct: 282 LCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPT 341

Query: 467 DITHRTLIWGFCR----------ADQ------------------------VEEAVDLLKE 492
             ++  +I   C+           DQ                        V+EA  +++ 
Sbjct: 342 ASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQS 401

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +G + +      Y++VI  LC+      A Q+L  M    + PD   +S++++ +  +GM
Sbjct: 402 LGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGM 461

Query: 553 TEEAYKLWQKLIE 565
             EA +++  + E
Sbjct: 462 LNEAIEIFSVMEE 474



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/392 (27%), Positives = 196/392 (50%), Gaps = 2/392 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C  G LT + +L+D + ++  +P+ +    L+    +    ++ASK+L  +
Sbjct: 169 TYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEI 228

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  GG P+ ++YN+++ GLCK G+   A+ L  E+   G  P+V++YN +LR++ + G++
Sbjct: 229 IAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRW 288

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     +       P  +TY ILI  +        A+EVL++M      P   +YN +
Sbjct: 289 EEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPI 348

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK  K D  V  ++ ++ R   PN  TYN  + +L   G       I+  +    H
Sbjct: 349 IARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQH 407

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
             T   Y I+I  LC+ G    A     +M      PD  TY++++  LC EGMLNEA++
Sbjct: 408 FSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIE 467

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +  ++   +       YN+LI G  K    + A+ ++  M+  G   ++ T+  L+ G  
Sbjct: 468 IFSVME-ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGII 526

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
              +++ A ++L+E+  R    +++  RLV+ 
Sbjct: 527 HEKEMDLATEVLRELQLRDVINQSTVERLVMQ 558



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 2/170 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N I    C  G + +A  +I  +  +       F   +I  L R      A ++L
Sbjct: 376 NEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLL 434

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD+ TY+ ++ GLC  G +  AI +   M     + D   YN+++     +
Sbjct: 435 YEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENIKLDTENYNSLILGCCKS 493

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
            +   A+  ++  + KG      TYTIL+E +  +  +  A EVL ++ +
Sbjct: 494 RRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQL 543


>gi|125544747|gb|EAY90886.1| hypothetical protein OsI_12495 [Oryza sativa Indica Group]
          Length = 742

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 238/456 (52%), Gaps = 10/456 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    N +L       K+     +   M  R   PD      L++ L R  ++  A 
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ M   G  PD  T+  ++ G  + G I +A+ +   M   GC    +T N ++   
Sbjct: 202 IMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+ + A+G+ + ++  G  P  ITY   +  +C+   +  A++V+D M  EG  PD+
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSRGCWDAVDKIL 350
            TYN +VN  CK G+ ++A  ++N ++ RG  P+  T+NTL+ +L  G+R     +++ L
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR-----LEEAL 376

Query: 351 DIMNEAS---HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           D+  + +    SP V+T+NILIN LCK G    A+  F +M +  C PD VTYNT++  L
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C  G L +AL LL  +  + C    ITYNT+IDGL KK  +E+A  ++ QM   GIS + 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           IT  TLI G C+  ++++A +L+ ++   G +  N  Y  ++   CK   +  A  +LE 
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M ++ ++ D   + T++  +   G T+ A K+ + +
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 232/448 (51%), Gaps = 1/448 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++ DA   I         PD       + GL + D +  A KV+ +M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD  TYN++V  LCK GQ+  A  +L++M   GC PD+ T+NT++  +    + 
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+   +    KG  P + T+ ILI  +CK      A+ + ++M   GC+PD VTYN+L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  GK   A+ ++ ++ S G   ++ITYNT++  L  +   +  +++ D M+    
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S    T+N LI+GLCK   +D A    NQM+S+  QP+ +TYN++L   CK+G + +A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +  +     ++TY TLI+GL K G  + A+ +   M   G+ P    +  ++    
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-SKKVDMAIQVLELMISSRYKPDD 537
           R + + +A+ L +E+ + G       Y++V  GLC+    +  A   +  M+   + P+ 
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 672

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + F  + + + + GM +   +  + ++E
Sbjct: 673 SSFRMLAEGLLNLGMDDYFIRAIEIIME 700



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 236/453 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N +++  C   ++  A  +++ M+ R   PD      L++G +    IE A 
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V   M+  G     +T N+++ G CK G++  A+  + +    G EPD ITYNT +  +
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N     A+      +++G  P + TY I++  +CK   +  A  +L+ M   GC PDI
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+N+L+   C   + ++A+ +   +  +G+ P+  T+N L+++L   G      ++ + 
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M  +  +P   TYN LI+ LC  G + +A++    M S  C    +TYNT++  LCK+  
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA ++   ++    S   IT+NTLIDGL K   ++ A  L  QM+  G+ P++IT+ +
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 536

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++  +C+   +++A D+L+ +   G ++    Y  +I+GLCK+ +  +A++VL  M    
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +P    ++ +++ +       +A  L++++ E
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 217/423 (51%), Gaps = 35/423 (8%)

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q+  + G   DT+ YN ++  L +  +++   ++  EM   G +PDV+T+NT+++ +   
Sbjct: 135 QLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + + A+   ++   +G  P   T+T L++   ++  I  A+ V   M   GCS   VT 
Sbjct: 195 HQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK G+ +DA+  I   ++ G EP+ ITYNT ++ L          K++D+M +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             H P VFTYNI++N LCK G ++ A    NQMV + C PDI T+NT++ ALC    L E
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL L   +     SP + T+N LI+ L K G    A+ L+ +M  +G +PD++T+ TLI 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 476 GFCRADQVEEAVDLLKEIGKRG----------------NKMRNS---------------- 503
             C   ++ +A+DLLK++   G                 KMR                  
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 504 ---AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               +  +I GLCK KK+D A +++  MIS   +P++  +++I+      G  ++A  + 
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 561 QKL 563
           + +
Sbjct: 555 ETM 557



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 203/405 (50%), Gaps = 23/405 (5%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           + ++ HDP            D  T N ++   C  G+L +A  +++ M  R  +PD    
Sbjct: 312 MVQEGHDP------------DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
             LI  L   +R+E+A  + + + + G  PD  T+N+++  LCK G    A+ L +EM  
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
           SGC PD +TYNT++  +   GK  +A+   KD    GCP   ITY  +I+ +CK+  I  
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A EV D M ++G S + +T+N+L++  CK  K DDA  +IN ++S G++PN+ITYN++L 
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 539

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               +G       IL+ M        V TY  LINGLCK G    A+     M  K  +P
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC-MEKAMVL 454
               YN VL +L +   + +AL L   +      P  +TY  +  GL + G  +++A   
Sbjct: 600 TPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDF 659

Query: 455 YGQMMENGISPDDITHRTLIWG---------FCRA-DQVEEAVDL 489
             +M++ G  P+  + R L  G         F RA + + E VDL
Sbjct: 660 MLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL 704



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 187/382 (48%), Gaps = 2/382 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            P    Y  ++  L   G +     L+ EM   G +  +   ++ L +      F  A+ 
Sbjct: 71  APGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVD 130

Query: 244 FWKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +QL+   G     + Y  L+  + +   +     V  +M   G  PD+VT+N+L+  
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+  +   AV+++  + SRG+ P+  T+ TL+      G  +A  ++   M E   S T
Sbjct: 191 LCRAHQVRTAVIMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             T N+LING CK G V+ A+    Q ++   +PD +TYNT +  LC+   +  AL+++ 
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           ++      P + TYN +++ L K G +E+A  +  QM++ G  PD  T  TLI   C  +
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++EEA+DL +++  +G       + ++I+ LCK     +A+++ E M +S   PD+  ++
Sbjct: 371 RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
           T++  +   G   +A  L + +
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDM 452



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 157/317 (49%), Gaps = 41/317 (12%)

Query: 265 EQVCKQCGIARAIEVLD----DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           E++ ++ G   A++++     +M  EG    +   +S ++    Q  +DDAV +I N L 
Sbjct: 78  EEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQ 137

Query: 321 R--GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G++ +++ YN LL                               N+L+ G  K  L+
Sbjct: 138 PLFGIQADTVVYNHLL-------------------------------NVLVEG-SKMKLL 165

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           +   + +++M ++  +PD+VT+NT++ ALC+   +  A+ +L  ++    +P   T+ TL
Sbjct: 166 E---SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVIMLEEMSSRGVAPDETTFTTL 222

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           + G  ++G +E A+ +  +M+E G S   +T   LI G+C+  +VE+A+  +++    G 
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGF 282

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +     Y   ++GLC++  V  A++V+++M+   + PD   ++ +V  +  +G  EEA  
Sbjct: 283 EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKG 342

Query: 559 LWQKLIEWKVFEKGTTL 575
           +  ++++       TT 
Sbjct: 343 ILNQMVDRGCLPDITTF 359


>gi|255572834|ref|XP_002527349.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533268|gb|EEF35021.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 443

 Score =  238 bits (607), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 124/348 (35%), Positives = 190/348 (54%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E  +N  L      G+L +  + ++ M  R  IPD   C +LIRG  +I +  KA++++
Sbjct: 83  EEIESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIM 142

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +I+  SG VPD ITYN+++ G+C  G+   A  LL +M   GC P V+T+N ++  +   
Sbjct: 143 EIIEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRK 202

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +AI   +   + GC P  ++Y  L+   CK+  + RAIE L  M   GC PDIVTY
Sbjct: 203 GLLGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTY 262

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+   CK GK D AV ++N L S+G  P  ITYNT++  L   G  D   K+LD M  
Sbjct: 263 NTLLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRA 322

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TY+ L+ GL + G VD AI  F+ +     +P+ +TYN ++  LCK    + 
Sbjct: 323 KGLKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDR 382

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           A+  L  +    C P   +Y  LI+GLA +G  ++A+ L  ++   G+
Sbjct: 383 AIDFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGV 430



 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 121/353 (34%), Positives = 206/353 (58%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           N +  L+R   +E+  + L+ MV  G +PD I    ++ G CK G+ R A  +++ +  S
Sbjct: 89  NNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEIIEDS 148

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  PDVITYN ++  M   G++  A     D +R+GC P ++T+ ILI  +C++  + RA
Sbjct: 149 GAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGLLGRA 208

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           I+VL+ M   GC+P+ ++YN L++  CK+ K + A+  +  + SRG  P+ +TYNTLL +
Sbjct: 209 IDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTA 268

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G  DA  ++L+ ++    SP + TYN +I+GL K G  D+A    ++M +K  +PD
Sbjct: 269 LCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPD 328

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           I+TY++++G L +EG ++EA++  H L      P  ITYN ++ GL K    ++A+    
Sbjct: 329 IITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLA 388

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            M++ G  P + ++  LI G       +EA++LL E+  RG   ++SA ++ +
Sbjct: 389 YMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSAEKVAV 441



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 119/352 (33%), Positives = 201/352 (57%)

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           I  N  L  +  NG+ ++   F +  + +G  P +I  T LI   CK     +A  +++ 
Sbjct: 85  IESNNNLSKLVRNGELEEGFRFLESMVYRGDIPDIIPCTSLIRGFCKIGKTRKATRIMEI 144

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           +   G  PD++TYN L++  C  G++ DA  ++ +++ RG  P+ +T+N L++ L  +G 
Sbjct: 145 IEDSGAVPDVITYNVLISGMCSTGRWMDAEKLLADMVRRGCSPSVVTFNILINFLCRKGL 204

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                 +L+ M +   +P   +YN L++G CK   ++RAI    +M S+ C PDIVTYNT
Sbjct: 205 LGRAIDVLEKMPKHGCTPNSLSYNPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNT 264

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           +L ALCK+G ++ A++LL+ L+   CSP LITYNT+IDGL+K G  ++A  L  +M   G
Sbjct: 265 LLTALCKDGKVDAAVELLNQLSSKGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKG 324

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + PD IT+ +L+ G  R  +V+EA+    ++   G K     Y  ++ GLCK++K D AI
Sbjct: 325 LKPDIITYSSLVGGLSREGKVDEAIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAI 384

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             L  M+    KP +  ++ +++ +A +G+ +EA +L  +L    V +K + 
Sbjct: 385 DFLAYMVQRGCKPTEASYTILIEGLAYEGLAKEALELLNELCLRGVVKKSSA 436



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 66/207 (31%), Positives = 102/207 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L  FC   K+  A + +  M  R   PD      L+  L +  +++ A ++L  +  
Sbjct: 228 NPLLHGFCKEKKMERAIEYLGKMTSRGCYPDIVTYNTLLTALCKDGKVDAAVELLNQLSS 287

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  ITYN ++ GL K G+   A  LLDEM   G +PD+ITY++++  +   GK  +
Sbjct: 288 KGCSPVLITYNTVIDGLSKVGKTDQAAKLLDEMRAKGLKPDIITYSSLVGGLSREGKVDE 347

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI F+ D    G  P  ITY  ++  +CK     RAI+ L  M   GC P   +Y  L+ 
Sbjct: 348 AIKFFHDLEVLGVKPNAITYNAIMLGLCKARKTDRAIDFLAYMVQRGCKPTEASYTILIE 407

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNS 327
               +G   +A+ ++N L  RG+   S
Sbjct: 408 GLAYEGLAKEALELLNELCLRGVVKKS 434


>gi|449504220|ref|XP_004162287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Cucumis sativus]
          Length = 566

 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 135/467 (28%), Positives = 237/467 (50%), Gaps = 37/467 (7%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           +L DA   ++ M  + Q PD      L+  L +  ++ KA KV+++M+ SG +PD  +Y 
Sbjct: 77  RLNDAFFHLEFMVEKGQKPDVFQATQLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYT 136

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            +V  LC++G +  A+ L+D+M   G   +  TYN+++R +  +G   Q++      ++K
Sbjct: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQK 196

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P   TY+ L+E   K+ G   A ++LD++  +G  P++V+YN L+   CK+G+ +DA
Sbjct: 197 GLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDA 256

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + +   L S+G  PN ++YN LL SL + G W+  + +L  M+    SP+  TYNILI  
Sbjct: 257 MQLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGS 316

Query: 372 -----------------------------------LCKYGLVDRAINSFNQMVSKNCQPD 396
                                              LCK   VD  +   +QM+ ++C P+
Sbjct: 317 LTLHGRTEHALEVLEEMIRARFKPTASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPN 376

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             TYN +   LC+EGM+ EA  ++  L           Y  +I  L +KG    A  L  
Sbjct: 377 EGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLY 435

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M + G +PD  T+ +LI G C    + EA+++   + +   K+    Y  +I G CKS+
Sbjct: 436 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFS-VMEENIKLDTENYNSLILGCCKSR 494

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + D+A+ V E+M+   Y  ++T ++ +V+ +  +   + A ++ ++L
Sbjct: 495 RTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLREL 541



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/433 (27%), Positives = 201/433 (46%), Gaps = 39/433 (9%)

Query: 172 SKVLQIMVMSGGVPDTITY--NMMVGGL---CKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           SKVL    ++    DTI    N  +G L    K  ++  A   L+ M   G +PDV    
Sbjct: 42  SKVLASTQITISPKDTIFTLPNWKIGKLDQKSKELRLNDAFFHLEFMVEKGQKPDVFQAT 101

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            +L  +    K ++AI   +  +  G  P   +YT L+  +C++  +  A++++D M   
Sbjct: 102 QLLYDLCKTCKMRKAIKVMEMMIGSGIIPDAASYTFLVSSLCRKGNVGYAMQLVDKMEEY 161

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G   +  TYNSLV   C  G    ++ +++ L+ +G+ PN+ TY+ LL +       D  
Sbjct: 162 GYPTNTATYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEA 221

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            K+LD +      P + +YN+L+ GLCK G  + A+  F ++ SK   P++V+YN +L +
Sbjct: 222 SKLLDEIIAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRS 281

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LC EG   EA  LL  ++G   SP  +TYN LI  L   G  E A+ +  +M+     P 
Sbjct: 282 LCNEGRWEEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPT 341

Query: 467 DITHRTLIWGFCR----------ADQ------------------------VEEAVDLLKE 492
             ++  +I   C+           DQ                        V+EA  +++ 
Sbjct: 342 ASSYNPIIARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNAIATLCEEGMVQEAFSIIQS 401

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +G + +      Y++VI  LC+      A Q+L  M    + PD   +S++++ +  +GM
Sbjct: 402 LGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGM 461

Query: 553 TEEAYKLWQKLIE 565
             EA +++  + E
Sbjct: 462 LNEAIEIFSVMEE 474



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 196/392 (50%), Gaps = 2/392 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C  G LT + +L+D + ++  +P+ +    L+    +    ++ASK+L  +
Sbjct: 169 TYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEI 228

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  GG P+ ++YN+++ GLCK G+   A+ L  E+   G  P+V++YN +LR++ + G++
Sbjct: 229 IAKGGKPNLVSYNVLLTGLCKEGRTEDAMQLFRELPSKGFSPNVVSYNILLRSLCNEGRW 288

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     +       P  +TY ILI  +        A+EVL++M      P   +YN +
Sbjct: 289 EEANVLLAEMDGDERSPSTVTYNILIGSLTLHGRTEHALEVLEEMIRARFKPTASSYNPI 348

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK  K D  V  ++ ++ R   PN  TYN  + +L   G       I+  +    H
Sbjct: 349 IARLCKDRKVDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQH 407

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
             T   Y I+I  LC+ G    A     +M      PD  TY++++  LC EGMLNEA++
Sbjct: 408 FSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIE 467

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +  ++   +       YN+LI G  K    + A+ ++  M+  G   ++ T+  L+ G  
Sbjct: 468 IFSVME-ENIKLDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLANETTYTILVEGII 526

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
              +++ A ++L+E+  R    +++  RL++ 
Sbjct: 527 HEKEMDLATEVLRELQLRDVINQSTVERLIMQ 558



 Score = 57.0 bits (136), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 75/170 (44%), Gaps = 2/170 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N I    C  G + +A  +I  +  +       F   +I  L R      A ++L
Sbjct: 376 NEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHFSTQEFYKIVITSLCRKGNTYPAFQLL 434

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD+ TY+ ++ GLC  G +  AI +   M     + D   YN+++     +
Sbjct: 435 YEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVME-ENIKLDTENYNSLILGCCKS 493

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
            +   A+  ++  + KG      TYTIL+E +  +  +  A EVL ++ +
Sbjct: 494 RRTDLALDVFEIMVGKGYLANETTYTILVEGIIHEKEMDLATEVLRELQL 543


>gi|125587025|gb|EAZ27689.1| hypothetical protein OsJ_11637 [Oryza sativa Japonica Group]
          Length = 650

 Score =  238 bits (606), Expect = 7e-60,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 238/456 (52%), Gaps = 10/456 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    N +L       K+     +   M  R   PD      L++ L R  ++  A 
Sbjct: 50  IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 109

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ M   G  PD  T+  ++ G  + G I +A+ +   M   GC    +T N ++   
Sbjct: 110 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 169

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+ + A+G+ + ++  G  P  ITY   +  +C+   +  A++V+D M  EG  PD+
Sbjct: 170 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 229

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSRGCWDAVDKIL 350
            TYN +VN  CK G+ ++A  ++N ++ RG  P+  T+NTL+ +L  G+R     +++ L
Sbjct: 230 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR-----LEEAL 284

Query: 351 DIMNEAS---HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           D+  + +    SP V+T+NILIN LCK G    A+  F +M +  C PD VTYNT++  L
Sbjct: 285 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 344

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C  G L +AL LL  +  + C    ITYNT+IDGL KK  +E+A  ++ QM   GIS + 
Sbjct: 345 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 404

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           IT  TLI G C+  ++++A +L+ ++   G +  N  Y  ++   CK   +  A  +LE 
Sbjct: 405 ITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 464

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M ++ ++ D   + T++  +   G T+ A K+ + +
Sbjct: 465 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 500



 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 232/448 (51%), Gaps = 1/448 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++ DA   I         PD       + GL + D +  A KV+ +M
Sbjct: 161 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 220

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD  TYN++V  LCK GQ+  A  +L++M   GC PD+ T+NT++  +    + 
Sbjct: 221 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 280

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+   +    KG  P + T+ ILI  +CK      A+ + ++M   GC+PD VTYN+L
Sbjct: 281 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 340

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  GK   A+ ++ ++ S G   ++ITYNT++  L  +   +  +++ D M+    
Sbjct: 341 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 400

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S    T+N LI+GLCK   +D A    NQM+S+  QP+ +TYN++L   CK+G + +A  
Sbjct: 401 SRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 460

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +  +     ++TY TLI+GL K G  + A+ +   M   G+ P    +  ++    
Sbjct: 461 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 520

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-SKKVDMAIQVLELMISSRYKPDD 537
           R + + +A+ L +E+ + G       Y++V  GLC+    +  A   +  M+   + P+ 
Sbjct: 521 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 580

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + F  + + + + GM +   +  + ++E
Sbjct: 581 SSFRMLAEGLLNLGMDDYFIRAIEIIME 608



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 236/453 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N +++  C   ++  A  +++ M+ R   PD      L++G +    IE A 
Sbjct: 85  IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 144

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V   M+  G     +T N+++ G CK G++  A+  + +    G EPD ITYNT +  +
Sbjct: 145 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 204

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N     A+      +++G  P + TY I++  +CK   +  A  +L+ M   GC PDI
Sbjct: 205 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 264

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+N+L+   C   + ++A+ +   +  +G+ P+  T+N L+++L   G      ++ + 
Sbjct: 265 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 324

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M  +  +P   TYN LI+ LC  G + +A++    M S  C    +TYNT++  LCK+  
Sbjct: 325 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 384

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA ++   ++    S   IT+NTLIDGL K   ++ A  L  QM+  G+ P++IT+ +
Sbjct: 385 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNS 444

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++  +C+   +++A D+L+ +   G ++    Y  +I+GLCK+ +  +A++VL  M    
Sbjct: 445 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 504

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +P    ++ +++ +       +A  L++++ E
Sbjct: 505 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 537



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 217/423 (51%), Gaps = 35/423 (8%)

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q+  + G   DT+ YN ++  L +  +++   ++  EM   G +PDV+T+NT+++ +   
Sbjct: 43  QLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 102

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + + A+   ++   +G  P   T+T L++   ++  I  A+ V   M   GCS   VT 
Sbjct: 103 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 162

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK G+ +DA+  I   ++ G EP+ ITYNT ++ L          K++D+M +
Sbjct: 163 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 222

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             H P VFTYNI++N LCK G ++ A    NQMV + C PDI T+NT++ ALC    L E
Sbjct: 223 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 282

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL L   +     SP + T+N LI+ L K G    A+ L+ +M  +G +PD++T+ TLI 
Sbjct: 283 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 342

Query: 476 GFCRADQVEEAVDLLKEIGKRG----------------NKMRNS---------------- 503
             C   ++ +A+DLLK++   G                 KMR                  
Sbjct: 343 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 402

Query: 504 ---AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               +  +I GLCK KK+D A +++  MIS   +P++  +++I+      G  ++A  + 
Sbjct: 403 NAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 462

Query: 561 QKL 563
           + +
Sbjct: 463 ETM 465



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 203/405 (50%), Gaps = 23/405 (5%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           + ++ HDP            D  T N ++   C  G+L +A  +++ M  R  +PD    
Sbjct: 220 MVQEGHDP------------DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 267

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
             LI  L   +R+E+A  + + + + G  PD  T+N+++  LCK G    A+ L +EM  
Sbjct: 268 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 327

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
           SGC PD +TYNT++  +   GK  +A+   KD    GCP   ITY  +I+ +CK+  I  
Sbjct: 328 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 387

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A EV D M ++G S + +T+N+L++  CK  K DDA  +IN ++S G++PN+ITYN++L 
Sbjct: 388 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFELINQMISEGLQPNNITYNSILT 447

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               +G       IL+ M        V TY  LINGLCK G    A+     M  K  +P
Sbjct: 448 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 507

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC-MEKAMVL 454
               YN VL +L +   + +AL L   +      P  +TY  +  GL + G  +++A   
Sbjct: 508 TPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDF 567

Query: 455 YGQMMENGISPDDITHRTLIWG---------FCRA-DQVEEAVDL 489
             +M++ G  P+  + R L  G         F RA + + E VDL
Sbjct: 568 MLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL 612



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 99/357 (27%), Positives = 180/357 (50%), Gaps = 2/357 (0%)

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQ 266
           L+ EM   G +  +   ++ L +      F  A+    +QL+   G     + Y  L+  
Sbjct: 4   LVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQPLFGIQADTVVYNHLLNV 63

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           + +   +     V  +M   G  PD+VT+N+L+   C+  +   AVL++  + SRG+ P+
Sbjct: 64  LVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPD 123

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
             T+ TL+      G  +A  ++   M E   S T  T N+LING CK G V+ A+    
Sbjct: 124 ETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQ 183

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           Q ++   +PD +TYNT +  LC+   +  AL+++ ++      P + TYN +++ L K G
Sbjct: 184 QEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNG 243

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +E+A  +  QM++ G  PD  T  TLI   C  +++EEA+DL +++  +G       + 
Sbjct: 244 QLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFN 303

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++I+ LCK     +A+++ E M +S   PD+  ++T++  +   G   +A  L + +
Sbjct: 304 ILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDM 360



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 63/234 (26%), Positives = 127/234 (54%), Gaps = 3/234 (1%)

Query: 344 DAVDKILDIMNE--ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
           DAVD IL+ +       + TV  YN L+N L +   +    + +++M ++  +PD+VT+N
Sbjct: 35  DAVDLILNQLQPLFGIQADTV-VYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFN 93

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           T++ ALC+   +  A+ +L  ++    +P   T+ TL+ G  ++G +E A+ +  +M+E 
Sbjct: 94  TLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEM 153

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G S   +T   LI G+C+  +VE+A+  +++    G +     Y   ++GLC++  V  A
Sbjct: 154 GCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHA 213

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           ++V+++M+   + PD   ++ +V  +  +G  EEA  +  ++++       TT 
Sbjct: 214 LKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 267


>gi|357140400|ref|XP_003571756.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Brachypodium distachyon]
          Length = 673

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 145/478 (30%), Positives = 237/478 (49%), Gaps = 32/478 (6%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI-RGLIRIDRIEKASKVLQ 176
           ++ N +L  F      TD   L   M  R+++P   F  ++  R L R+ R ++A  +L+
Sbjct: 137 RSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIAARALCRLGRADEALTMLR 196

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M   G VPDT+ Y  ++  LC +G +  A  LLDEM + GC  DV T+N I+  +   G
Sbjct: 197 SMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLG 256

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVC--KQCGIAR------------------- 275
           + ++A       + +GC P  ITY  L++ +C   Q   AR                   
Sbjct: 257 RLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTMLGRVPELNVVLFNTVIG 316

Query: 276 ----------AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
                     A E+ + M  +GC PD  TY+ L++  CK G+   A+ ++  +  +G  P
Sbjct: 317 RCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAP 376

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           + +TY  LLHS    G WD +  +L++M++   S  +  YN +I  +CK   +D A+   
Sbjct: 377 SIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFM 436

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            +M S+  +PDI TYNT++  LC    + EA  L   L         ITYNTLI  L + 
Sbjct: 437 QEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRN 496

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G  + A+ L   M+ +G S D +++  LI   CR   V+ ++ LL E+ ++G K  N +Y
Sbjct: 497 GSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSY 556

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            L+I  LCK+++V  A+++ + M++    PD   ++T++  +   G    A  L +KL
Sbjct: 557 NLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKL 614



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 127/413 (30%), Positives = 202/413 (48%), Gaps = 31/413 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N I+   C+ G+L +A++L+D M  R  +P+      L++GL    ++E+A  +L
Sbjct: 241 DVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEARTML 300

Query: 176 -------------------------------QIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
                                          + M   G  PD  TY++++ GLCK G++ 
Sbjct: 301 GRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLG 360

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           SA+ LL EM   G  P ++TY  +L +   NG +       +    KG    L  Y  +I
Sbjct: 361 SAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMI 420

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             VCK   +  A+  + +M  +G  PDI TYN+++   C   + ++A  +  NLL  G+ 
Sbjct: 421 CAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVV 480

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            N+ITYNTL+H+L   G W     + + M     S  + +YN LI  LC+ G VDR+I  
Sbjct: 481 ANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIML 540

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            ++M  K  +P+ V+YN ++  LCK   + +AL+L   +     +P ++TYNTLI+GL K
Sbjct: 541 LSEMAEKGIKPNNVSYNLLISELCKTRRVRDALELSKEMLNQELTPDIVTYNTLINGLCK 600

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
            G M  A+ L  ++    +  D IT+  LI   C+A  + +A  LL      G
Sbjct: 601 MGWMHAALNLLEKLHNEDVHADIITYNILISWHCKARLLHDASMLLNRAVTSG 653



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/458 (26%), Positives = 228/458 (49%), Gaps = 39/458 (8%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C++G + +A+ L+D M       D +   +++ GL  + R+ +A++++  M++ G
Sbjct: 213 VIHALCAQGGVNEAATLLDEMFLMGCSADVNTFNDIVHGLCTLGRLREAARLVDRMMIRG 272

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VP+ ITY  ++ GLC   Q+  A  +L  +     E +V+ +NT++     +GK K+A 
Sbjct: 273 CVPNAITYGFLLKGLCLASQVEEARTMLGRVP----ELNVVLFNTVIGRCLLDGKLKEAA 328

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             ++    KGCPP   TY+ILI  +CK   +  A+++L +M  +G +P IVTY  L++  
Sbjct: 329 ELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSF 388

Query: 303 CKQG-----------------------------------KYDDAVLVINNLLSRGMEPNS 327
           C+ G                                   + DDA+  +  + S+G +P+ 
Sbjct: 389 CRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDI 448

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
            TYNT+++ L +    +  + + + +          TYN LI+ L + G    AI+  N 
Sbjct: 449 CTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLAND 508

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           MV   C  DIV+YN ++ ALC++G ++ ++ LL  +      P  ++YN LI  L K   
Sbjct: 509 MVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRR 568

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +  A+ L  +M+   ++PD +T+ TLI G C+   +  A++LL+++           Y +
Sbjct: 569 VRDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNI 628

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           +I   CK++ +  A  +L   ++S   P++  +  +V+
Sbjct: 629 LISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQ 666



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/351 (29%), Positives = 182/351 (51%), Gaps = 37/351 (10%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           GKL +A++L + M  +   PD H    LI GL ++ R+  A K+L+ M   G  P  +TY
Sbjct: 322 GKLKEAAELYETMGSKGCPPDAHTYSILIHGLCKLGRLGSAMKLLREMEDKGFAPSIVTY 381

Query: 191 NMMVGGLCKRG---QIRS--------------------------------AIALLDEMSV 215
            +++   C+ G    IR+                                A+  + EM  
Sbjct: 382 TILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLEGYNGMICAVCKDRRMDDAMRFMQEMKS 441

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G +PD+ TYNTI+  + +N + ++A   +++ L +G     ITY  LI  + +      
Sbjct: 442 QGYKPDICTYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQD 501

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           AI + +DM + GCS DIV+YN L+   C+ G  D ++++++ +  +G++PN+++YN L+ 
Sbjct: 502 AISLANDMVLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLIS 561

Query: 336 SL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            L  +R   DA++   +++N+   +P + TYN LINGLCK G +  A+N   ++ +++  
Sbjct: 562 ELCKTRRVRDALELSKEMLNQ-ELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVH 620

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            DI+TYN ++   CK  +L++A  LL+    S  +P   T+  ++    +K
Sbjct: 621 ADIITYNILISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNFVRK 671



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/432 (25%), Positives = 193/432 (44%), Gaps = 6/432 (1%)

Query: 136 ASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT-ITYNMM 193
           A  L+D +  R  + P F     ++    R D       + + MV    VP T  T+++ 
Sbjct: 119 ALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIA 178

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
              LC+ G+   A+ +L  M+  GC PD + Y T++  +   G   +A     +    GC
Sbjct: 179 ARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGC 238

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
              + T+  ++  +C    +  A  ++D M I GC P+ +TY  L+   C   + ++A  
Sbjct: 239 SADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEA-- 296

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
               +L R  E N + +NT++      G      ++ + M      P   TY+ILI+GLC
Sbjct: 297 --RTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLC 354

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K G +  A+    +M  K   P IVTY  +L + C+ GM +    +L +++    S  L 
Sbjct: 355 KLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLE 414

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            YN +I  + K   M+ AM    +M   G  PD  T+ T+I+  C  +Q+EEA  L + +
Sbjct: 415 GYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENL 474

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
              G       Y  +IH L ++     AI +   M+      D   ++ ++K +  DG  
Sbjct: 475 LHEGVVANAITYNTLIHALLRNGSWQDAISLANDMVLHGCSLDIVSYNGLIKALCRDGNV 534

Query: 554 EEAYKLWQKLIE 565
           + +  L  ++ E
Sbjct: 535 DRSIMLLSEMAE 546



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 178/371 (47%), Gaps = 6/371 (1%)

Query: 206 AIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL-RKGCPPYLITYTIL 263
           A+ LLD++       P   +YNT+L            +  ++  + R   PP   T++I 
Sbjct: 119 ALHLLDQLPHRFAVSPSFRSYNTVLAAFARADCHTDVLSLYRRMVHRDRVPPTTFTFSIA 178

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
              +C+      A+ +L  MA  GC PD V Y ++++  C QG  ++A  +++ +   G 
Sbjct: 179 ARALCRLGRADEALTMLRSMARHGCVPDTVLYQTVIHALCAQGGVNEAATLLDEMFLMGC 238

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             +  T+N ++H L + G      +++D M      P   TY  L+ GLC    V+ A  
Sbjct: 239 SADVNTFNDIVHGLCTLGRLREAARLVDRMMIRGCVPNAITYGFLLKGLCLASQVEEA-- 296

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               M+ +  + ++V +NTV+G    +G L EA +L   +    C P   TY+ LI GL 
Sbjct: 297 --RTMLGRVPELNVVLFNTVIGRCLLDGKLKEAAELYETMGSKGCPPDAHTYSILIHGLC 354

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G +  AM L  +M + G +P  +T+  L+  FCR    +    +L+ +  +G  M   
Sbjct: 355 KLGRLGSAMKLLREMEDKGFAPSIVTYTILLHSFCRNGMWDNIRAMLEVMSDKGLSMNLE 414

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I  +CK +++D A++ ++ M S  YKPD   ++TI+  + ++   EEA  L++ L
Sbjct: 415 GYNGMICAVCKDRRMDDAMRFMQEMKSQGYKPDICTYNTIIYHLCNNNQMEEAEYLFENL 474

Query: 564 IEWKVFEKGTT 574
           +   V     T
Sbjct: 475 LHEGVVANAIT 485



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 113/219 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+ + C+  ++ +A  L + +     + +      LI  L+R    + A  +   M
Sbjct: 450 TYNTIIYHLCNNNQMEEAEYLFENLLHEGVVANAITYNTLIHALLRNGSWQDAISLANDM 509

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V+ G   D ++YN ++  LC+ G +  +I LL EM+  G +P+ ++YN ++  +    + 
Sbjct: 510 VLHGCSLDIVSYNGLIKALCRDGNVDRSIMLLSEMAEKGIKPNNVSYNLLISELCKTRRV 569

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A+   K+ L +   P ++TY  LI  +CK   +  A+ +L+ +  E    DI+TYN L
Sbjct: 570 RDALELSKEMLNQELTPDIVTYNTLINGLCKMGWMHAALNLLEKLHNEDVHADIITYNIL 629

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +++ CK     DA +++N  ++ G+ PN  T+  ++ + 
Sbjct: 630 ISWHCKARLLHDASMLLNRAVTSGITPNERTWGIMVQNF 668


>gi|357167655|ref|XP_003581269.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 587

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 144/518 (27%), Positives = 257/518 (49%), Gaps = 78/518 (15%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           ++ L +   RG+L  A ++++        PD      L+R L R  R   A++V++    
Sbjct: 60  DRRLSSLVHRGELDAALRVVE---SSLCPPDVALANRLVRDLCRRGRPADAARVVE---A 113

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G     +TY+ +  G C+ G++  A  ++D M V    P    YN ++  +   G+ + 
Sbjct: 114 CGSAATAVTYSALADGYCRVGRLDEARRVVDGMPVL---PSAYAYNPLMHALCVRGQVRD 170

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    + L +GC P ++TY IL+E  CK  G  +A+E++D M +EGC+P  VTYN +++
Sbjct: 171 ALVLLDNMLYRGCAPDVVTYNILLEAACKGRGYRQAMELIDLMRVEGCTPTNVTYNVIMD 230

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C++G  D A  ++N+L S G  PN++ YNT+L  L + G W+ V++++  M   +  P
Sbjct: 231 GMCREGDVDYARELLNSLPSYGCTPNTVNYNTVLKGLRTAGRWEDVEELIAEMFSENCPP 290

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +  T +++I+ LC+ GL  RAI    +M   +C  +IVTYN V+  LC++G ++ AL LL
Sbjct: 291 SEATLSVVISSLCQEGLFQRAIRLLEKMSKHDCTANIVTYNAVVSGLCEQGHVDGALYLL 350

Query: 421 HLLNGSSCSPCLITYNTLIDG-----------------------------------LAKK 445
             +    C P + TYN L+ G                                   L +K
Sbjct: 351 SNMQTDGCKPNIFTYNILVKGLCNAERWEDAEDLMAKMSQTDCLPDILTFNTIIGFLCQK 410

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG-------- 497
           G   +A+ ++ QM E G  P+ +T+ ++I G  +  ++E++++LL E+G +G        
Sbjct: 411 GLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLAKTGKMEQSLELLNEMGSKGFNPEINYH 470

Query: 498 -------------------NKMRNSA-------YRLVIHGLCKSKKVDMAIQVLELMISS 531
                              +K++++        Y  ++ GLC++ K D AI +L  M+S 
Sbjct: 471 LLAECLNEEDKLVEAIQMVHKLQDTGISPQAVLYNTILLGLCRNGKTDQAIDILSNMVSD 530

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
              PD++ +S +++ +A +G  +EA +L   L    V 
Sbjct: 531 GCMPDESTYSILIQGLAHEGYMKEARELLSTLSSRDVI 568



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 236/440 (53%), Gaps = 6/440 (1%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG  V       N ++   C RG++ DA  L+D M  R   PD      L+    +    
Sbjct: 144 DGMPVLPSAYAYNPLMHALCVRGQVRDALVLLDNMLYRGCAPDVVTYNILLEAACKGRGY 203

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A +++ +M + G  P  +TYN+++ G+C+ G +  A  LL+ +   GC P+ + YNT+
Sbjct: 204 RQAMELIDLMRVEGCTPTNVTYNVIMDGMCREGDVDYARELLNSLPSYGCTPNTVNYNTV 263

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L+ +   G+++       +   + CPP   T +++I  +C++    RAI +L+ M+   C
Sbjct: 264 LKGLRTAGRWEDVEELIAEMFSENCPPSEATLSVVISSLCQEGLFQRAIRLLEKMSKHDC 323

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           + +IVTYN++V+  C+QG  D A+ +++N+ + G +PN  TYN L+  L +   W+  + 
Sbjct: 324 TANIVTYNAVVSGLCEQGHVDGALYLLSNMQTDGCKPNIFTYNILVKGLCNAERWEDAED 383

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           ++  M++    P + T+N +I  LC+ GL  +A+  F QM  K C P+ VTY++V+  L 
Sbjct: 384 LMAKMSQTDCLPDILTFNTIIGFLCQKGLTMQAVEVFKQMPEKGCCPNSVTYSSVIEGLA 443

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G + ++L+LL+ +     +P  I Y+ L + L ++  + +A+ +  ++ + GISP  +
Sbjct: 444 KTGKMEQSLELLNEMGSKGFNP-EINYHLLAECLNEEDKLVEAIQMVHKLQDTGISPQAV 502

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            + T++ G CR  + ++A+D+L  +   G     S Y ++I GL     +  A ++L   
Sbjct: 503 LYNTILLGLCRNGKTDQAIDILSNMVSDGCMPDESTYSILIQGLAHEGYMKEARELLS-T 561

Query: 529 ISSRYKPDDTVFSTIVKKVA 548
           +SSR    D +   ++K  A
Sbjct: 562 LSSR----DVIVDNLIKNDA 577


>gi|359488007|ref|XP_002263892.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Vitis vinifera]
          Length = 539

 Score =  238 bits (606), Expect = 8e-60,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 240/466 (51%), Gaps = 8/466 (1%)

Query: 94  LTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH 153
           L+++KK     +P         D  T   ++ +FC   ++  A  ++  + +    PD  
Sbjct: 76  LSLSKKMDSFGIPP--------DVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTA 127

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
               L+RGL  + +I +A  V   MV  G  P+ +TY  ++ GLCK  Q+  A+ L  EM
Sbjct: 128 TFTTLVRGLCVVGKIGEALDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEM 187

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              G  PD+ TYN+++  + +  ++K       + ++    P +++  I+++ +CK+  +
Sbjct: 188 IAKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKV 247

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A +V+D M   G  PD+VTY +L++  C + + D+AV V + ++  G   N ++YNTL
Sbjct: 248 TEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTL 307

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           ++        D    + + M      P   TY+ LI+GLC  G +  AI  FN+MV+   
Sbjct: 308 INGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQ 367

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P++VTY+ +L  LCK   L EA+ LL  + GS+  P +  YN  IDG+ + G +E A  
Sbjct: 368 IPNLVTYSILLDYLCKNHRLAEAMALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARD 427

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L+  +   G+ PD  TH  +I G C+   ++EA  L +E+ + G       Y  +  GL 
Sbjct: 428 LFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGCLRNGCTYNTITQGLL 487

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           ++ K   AIQ+LE M++  +  D +  + +VK ++DDG+ +   ++
Sbjct: 488 QNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQI 533



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 204/401 (50%)

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
           +  + ++ A      M+     P    +  ++  + K     + ++L  +M   G  PDV
Sbjct: 32  LHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDV 91

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            T   ++ +     +   A+      L+ G  P   T+T L+  +C    I  A++V D 
Sbjct: 92  YTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDK 151

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  EG  P++VTY +L+N  CK  +  +A+ + + ++++G+ P+  TYN+L+H+L +   
Sbjct: 152 MVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCE 211

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           W  V  +L+ M ++   P V + NI+++ LCK G V  A +  + M+    +PD+VTY  
Sbjct: 212 WKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAA 271

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C    ++EA+++  ++  + C   +++YNTLI+G  K   ++KAM L+ +M    
Sbjct: 272 LMDGHCLRSEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQE 331

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + P+ +T+ TLI G C   ++++A+ L  E+   G       Y +++  LCK+ ++  A+
Sbjct: 332 LIPNTMTYSTLIHGLCHVGRLQDAIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAM 391

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +L+ +  S   PD  V++  +  +   G  E A  L+  L
Sbjct: 392 ALLKAIEGSNLDPDVQVYNIAIDGMCRAGDLEAARDLFSNL 432



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 87/324 (26%), Positives = 161/324 (49%)

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +   L    PP +  +  L+  + K    +  + +   M   G  PD+ T   ++N
Sbjct: 40  ALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYTLTIVIN 99

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C   + D A+ V+  +L  G +P++ T+ TL+  L   G       + D M      P
Sbjct: 100 SFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMVGEGFQP 159

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY  L+NGLCK   +  A+N F++M++K   PDI TYN+++ ALC          LL
Sbjct: 160 NVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWKHVTTLL 219

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           + +  S   P +++ N ++D L K+G + +A  +   M++ G+ PD +T+  L+ G C  
Sbjct: 220 NEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLR 279

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +++EAV +   + + G      +Y  +I+G CK +++D A+ + E M      P+   +
Sbjct: 280 SEMDEAVKVFDMMVRNGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTY 339

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           ST++  +   G  ++A  L+ +++
Sbjct: 340 STLIHGLCHVGRLQDAIALFNEMV 363



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 88/302 (29%), Positives = 157/302 (51%), Gaps = 4/302 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  GK+T+A  ++D+M +    PD      L+ G      +++A KV  +MV 
Sbjct: 235 NIVVDALCKEGKVTEAHDVVDMMIQGGVEPDVVTYAALMDGHCLRSEMDEAVKVFDMMVR 294

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G V + ++YN ++ G CK  +I  A+ L +EM      P+ +TY+T++  +   G+ + 
Sbjct: 295 NGCVCNVVSYNTLINGYCKIQRIDKAMYLFEEMCRQELIPNTMTYSTLIHGLCHVGRLQD 354

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS--PDIVTYNSL 298
           AI  + + +  G  P L+TY+IL++ +CK   +A A+ +L   AIEG +  PD+  YN  
Sbjct: 355 AIALFNEMVACGQIPNLVTYSILLDYLCKNHRLAEAMALLK--AIEGSNLDPDVQVYNIA 412

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C+ G  + A  + +NL  RG++P+  T+N ++  L  RG  D   K+   M+E   
Sbjct: 413 IDGMCRAGDLEAARDLFSNLAPRGLQPDVWTHNIMIRGLCKRGLLDEASKLFREMDENGC 472

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TYN +  GL +     RAI    +M+++    D+ T   ++  L  +G+     Q
Sbjct: 473 LRNGCTYNTITQGLLQNNKTSRAIQLLEEMLARGFSADVSTTALLVKMLSDDGLDQSVKQ 532

Query: 419 LL 420
           +L
Sbjct: 533 IL 534



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 127/268 (47%), Gaps = 3/268 (1%)

Query: 300 NFSCKQGKY---DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           NF  K   +   DDA+   + +L     P    +  LL S+     +  V  +   M+  
Sbjct: 26  NFQSKSLHFNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSF 85

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P V+T  I+IN  C    VD A++   +++    QPD  T+ T++  LC  G + EA
Sbjct: 86  GIPPDVYTLTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEA 145

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           L +   + G    P ++TY TL++GL K   + +A+ L+ +M+  GISPD  T+ +LI  
Sbjct: 146 LDVFDKMVGEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHA 205

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C   + +    LL E+ K        +  +V+  LCK  KV  A  V+++MI    +PD
Sbjct: 206 LCNLCEWKHVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGVEPD 265

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              ++ ++         +EA K++  ++
Sbjct: 266 VVTYAALMDGHCLRSEMDEAVKVFDMMV 293



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 54/229 (23%), Positives = 105/229 (45%), Gaps = 3/229 (1%)

Query: 343 WDAVDKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
           ++ +D  L   +   H    P +F +  L+  + K       ++   +M S    PD+ T
Sbjct: 34  FNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYT 93

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
              V+ + C    ++ AL +L  +      P   T+ TL+ GL   G + +A+ ++ +M+
Sbjct: 94  LTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
             G  P+ +T+ TL+ G C+  Q+ EA++L  E+  +G       Y  +IH LC   +  
Sbjct: 154 GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
               +L  M+ S+  P+    + +V  +  +G   EA+ +   +I+  V
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSLNIVVDALCKEGKVTEAHDVVDMMIQGGV 262



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 40/201 (19%), Positives = 97/201 (48%)

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
           +  +D A++SF++M+  +  P I  +  +L ++ K    +  L L   ++     P + T
Sbjct: 34  FNTLDDALSSFHRMLHMHPPPPIFEFAKLLTSIAKMKHYSTVLSLSKKMDSFGIPPDVYT 93

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
              +I+       ++ A+ +  ++++ G  PD  T  TL+ G C   ++ EA+D+  ++ 
Sbjct: 94  LTIVINSFCHLNRVDFALSVLAKILKLGHQPDTATFTTLVRGLCVVGKIGEALDVFDKMV 153

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
             G +     Y  +++GLCK +++  A+ +   MI+    PD   +++++  + +    +
Sbjct: 154 GEGFQPNVVTYGTLMNGLCKDRQLTEALNLFSEMIAKGISPDIFTYNSLIHALCNLCEWK 213

Query: 555 EAYKLWQKLIEWKVFEKGTTL 575
               L  ++++ K+     +L
Sbjct: 214 HVTTLLNEMVKSKIMPNVVSL 234


>gi|413948659|gb|AFW81308.1| hypothetical protein ZEAMMB73_549819 [Zea mays]
          Length = 795

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 261/522 (50%), Gaps = 42/522 (8%)

Query: 84  VLAVNKKLRGLTITKKSHDP-----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           V + N  ++GL + KKS +       + +  G     +  + N ++  F   G++  A  
Sbjct: 162 VFSYNALIKGLCVEKKSQEALELLIHMTADGGYNCSPNVVSYNTVIDGFFKEGEVDKAYF 221

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L   M  +   PD     +LI GL +   ++KA  +LQ M   G +PDT TYN+M+ G C
Sbjct: 222 LFHEMMGQGLPPDVVTYNSLIDGLCKAQAMDKAVAILQHMFDKGVMPDTRTYNIMIRGYC 281

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP--- 255
             GQ+  A+ LL +MS SG +PDV+TY+ +++     G+  +A   +   +RKG  P   
Sbjct: 282 SLGQLEEAVRLLKKMSGSGLQPDVVTYSLLIQYYCKIGRCAEARSVFDSMVRKGQKPNST 341

Query: 256 -YLI-------------------------------TYTILIEQVCKQCGIARAIEVLDDM 283
            Y I                                + ILI    K   + +A+    +M
Sbjct: 342 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 401

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G  PD+V+Y+++++  CK G+ +DAV   N ++S G+ PN I++ +L+H L S G W
Sbjct: 402 RQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 461

Query: 344 DAVDKI-LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
             V+++  +++N   H   +F  N +++ LCK G V  A + F+ ++    +PD+V+YNT
Sbjct: 462 KKVEELAFEMINRGIHPDAIFM-NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPDVVSYNT 520

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C  G ++E+++ L  +      P   TYN+L++G  K G +E A+ LY +M    
Sbjct: 521 LIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNGRVEDALALYREMFRKD 580

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +    IT   ++ G  +A ++  A +L  ++  RG ++R   Y  V+ GLC++  VD A+
Sbjct: 581 VKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEAL 640

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           ++ E + S  ++ D   FS ++  +   G  +EA  L+  ++
Sbjct: 641 RMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMV 682



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 227/451 (50%), Gaps = 39/451 (8%)

Query: 157 NLIRGLIRIDRIEKA-SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
            LI+GL   +R + A   V + M   G  PD  +YN ++ GLC   + + A+ LL  M+ 
Sbjct: 131 QLIKGLCDGNRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTA 190

Query: 216 SG---CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
            G   C P+V++YNT++   F  G+  +A   + + + +G PP ++TY  LI+ +CK   
Sbjct: 191 DGGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQA 250

Query: 273 IARAIEVLDDMAIEG---------------CS--------------------PDIVTYNS 297
           + +A+ +L  M  +G               CS                    PD+VTY+ 
Sbjct: 251 MDKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSL 310

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+ + CK G+  +A  V ++++ +G +PNS  Y+ LLH   ++G    V  +LD+M    
Sbjct: 311 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 370

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
                  +NILI    K+G VD+A+ +F +M     +PD+V+Y+TV+  LCK G + +A+
Sbjct: 371 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAV 430

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
              + +     SP +I++ +LI GL   G  +K   L  +M+  GI PD I   T++   
Sbjct: 431 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 490

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  +V EA D    +   G K    +Y  +I G C   K+D +I+ L+ M+S   +PD 
Sbjct: 491 CKEGRVVEAQDFFDMVIHIGVKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDS 550

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +++++     +G  E+A  L++++    V
Sbjct: 551 WTYNSLLNGYFKNGRVEDALALYREMFRKDV 581



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/458 (25%), Positives = 226/458 (49%), Gaps = 12/458 (2%)

Query: 113 VENDEKTNNKI----LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDR 167
           V   +K N+ I    L  + ++G L D   L+D+M R + IP  H   N LI    +   
Sbjct: 332 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIR-DGIPFEHRAFNILICAYAKHGA 390

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           ++KA      M  +G  PD ++Y+ ++  LCK G++  A+   ++M   G  P++I++ +
Sbjct: 391 VDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKTGRVEDAVYHFNQMVSEGLSPNIISFTS 450

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +   G++K+      + + +G  P  I    +++ +CK+  +  A +  D +   G
Sbjct: 451 LIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIG 510

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD+V+YN+L++  C  GK D+++  ++ ++S G+ P+S TYN+LL+     G    V+
Sbjct: 511 VKPDVVSYNTLIDGYCFVGKMDESIKQLDRMVSIGLRPDSWTYNSLLNGYFKNG---RVE 567

Query: 348 KILDIMNEASHSPTVF---TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
             L +  E       F   T NI+++GL + G +  A   + +MV +  Q  I TYNTVL
Sbjct: 568 DALALYREMFRKDVKFCAITSNIMLHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVL 627

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
           G LC+   ++EAL++   L        + T++ +I+ L K G +++A  L+  M+  G  
Sbjct: 628 GGLCENSCVDEALRMFEDLRSKEFELDVRTFSIVINALLKVGRIDEAKSLFSAMVLRGPV 687

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD IT+  +I        +EE+ +L   + K G    +    +++  L +   V  A   
Sbjct: 688 PDVITYSLMIKSHIEEGLLEESDNLFLSMEKNGCAADSHMLNIIVRRLLEKGDVRRAGTY 747

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           L  +    +  + +  + ++  V++    +E   L +K
Sbjct: 748 LTKIDEKNFSLEASTAALLIPIVSEKKYQKEVKFLPEK 785



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/283 (32%), Positives = 141/283 (49%), Gaps = 6/283 (2%)

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
           A A+ + + M   G +        L+   C  G+ D A       L  G    ++T N L
Sbjct: 73  ALAVSLFNTMVRSGVNMMAAIIGILIRCFCTVGRLDLAFAAFALFLKTGWRVQNVTLNQL 132

Query: 334 LHSL--GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           +  L  G+R   DA+D +   M E  ++P VF+YN LI GLC       A+     M + 
Sbjct: 133 IKGLCDGNR-TDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLIHMTAD 191

Query: 392 ---NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
              NC P++V+YNTV+    KEG +++A  L H + G    P ++TYN+LIDGL K   M
Sbjct: 192 GGYNCSPNVVSYNTVIDGFFKEGEVDKAYFLFHEMMGQGLPPDVVTYNSLIDGLCKAQAM 251

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           +KA+ +   M + G+ PD  T+  +I G+C   Q+EEAV LLK++   G +     Y L+
Sbjct: 252 DKAVAILQHMFDKGVMPDTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYSLL 311

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           I   CK  +   A  V + M+    KP+ T++  ++   A  G
Sbjct: 312 IQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG 354


>gi|414586649|tpg|DAA37220.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
 gi|414586650|tpg|DAA37221.1| TPA: hypothetical protein ZEAMMB73_348855 [Zea mays]
          Length = 969

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 150/488 (30%), Positives = 244/488 (50%), Gaps = 22/488 (4%)

Query: 94  LTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH 153
           L + +K ++  L SS    V N   T N   +  C  GK   A ++I +M R+  +PD  
Sbjct: 401 LALAEKVYEEMLASS---CVLNKVNTAN-FARCLCGMGKFDKAFQIIKLMMRKGFVPDTS 456

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
               +I  L    ++EKA  + Q M   G +PD  TY +++   CK G I  A +  DEM
Sbjct: 457 TYSKVITFLCEAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEM 516

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              GC P V+TY  +L       +  QA   +   +  GC P  ITY+ L++ +CK    
Sbjct: 517 ESVGCSPSVVTYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGES 576

Query: 274 ARAIEVL-----------DDMAIEG-----CSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            +A EV             D   EG      +P++VTY +L++  CK  K  DA  +++ 
Sbjct: 577 QKACEVYAKMIGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDV 636

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           + S G EPN I Y+ L+      G  D   ++   M++  + PTV TY  LI+ + K   
Sbjct: 637 MSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRR 696

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +D AI   +QM+  +C P++VTY  ++  LC+ G   +AL+LL ++    C+P ++TY +
Sbjct: 697 LDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTS 756

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LIDGL K G ++ ++ L+ QM+  G +P+ +T+R LI   C A  ++EA  LL E+ +  
Sbjct: 757 LIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTY 816

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y  V+ G   SKK   ++ +LE + S        V+  ++   +  G  E+A 
Sbjct: 817 WPKYVQGYCSVVQGF--SKKFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKAL 874

Query: 558 KLWQKLIE 565
           +L ++++E
Sbjct: 875 ELHKEMME 882



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 220/473 (46%), Gaps = 25/473 (5%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
            D+ T     Q  C  G+ +DA  +I+   R +   D   C  +I GL+     ++A   
Sbjct: 240 TDKFTVGCFAQALCKEGRWSDALVMIE---REDFKLDTVLCTQMISGLMEASLFDEAISF 296

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L  M  +  +P+ +TY  ++ G  K+ Q+     ++  M   GC P+   +N+++ +  +
Sbjct: 297 LHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCN 356

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG------IARAIEVLDDMAIEGC 288
              +  A          GCPP  + Y I I  +C          +A A +V ++M    C
Sbjct: 357 ARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSC 416

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             + V   +     C  GK+D A  +I  ++ +G  P++ TY+ ++  L      +    
Sbjct: 417 VLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFL 476

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M      P V+TY ILI+  CK GL+++A + F++M S  C P +VTY  +L A  
Sbjct: 477 LFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYL 536

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM--------- 459
           K   + +A  + H +  + C+P  ITY+ L+DGL K G  +KA  +Y +M+         
Sbjct: 537 KTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSD 596

Query: 460 -------ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
                   + I+P+ +T+  LI G C+A +V +A +LL  +   G +  +  Y  +I G 
Sbjct: 597 FYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGF 656

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           CK  K+D A +V   M    Y P    +++++  +  D   + A K+  +++E
Sbjct: 657 CKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLE 709



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 132/477 (27%), Positives = 228/477 (47%), Gaps = 26/477 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI-------RIDRIEKASK 173
           N ++ ++C+      A KL++ MA     P  +   N+  G I         D +  A K
Sbjct: 348 NSLVHSYCNARDYPYAYKLLNRMAGCG-CPPGYVVYNIFIGSICSGEELPSPDLLALAEK 406

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V + M+ S  V + +        LC  G+   A  ++  M   G  PD  TY+ ++  + 
Sbjct: 407 VYEEMLASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLC 466

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +  K ++A   +++    G  P + TYTILI+  CK   I +A    D+M   GCSP +V
Sbjct: 467 EAMKVEKAFLLFQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVV 526

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG----CWDAVDKI 349
           TY +L++   K  +   A  + + ++  G  PN+ITY+ L+  L   G      +   K+
Sbjct: 527 TYTALLHAYLKTKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKM 586

Query: 350 L--------DIMNEASH----SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
           +        D   E  H    +P V TY  LI+GLCK   V  A    + M S  C+P+ 
Sbjct: 587 IGTSDNVGSDFYFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNH 646

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           + Y+ ++   CK G L+ A ++   ++     P + TY +LID + K   ++ A+ +  Q
Sbjct: 647 IIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDRRLDLAIKVLSQ 706

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+E+  +P+ +T+  +I G CR  + ++A+ LL  + KRG       Y  +I GL KS K
Sbjct: 707 MLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGK 766

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE--WKVFEKG 572
           VDM++Q+   MI+    P+   +  ++      G+ +EA+ L  ++ +  W  + +G
Sbjct: 767 VDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQG 823



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 89/343 (25%), Positives = 159/343 (46%), Gaps = 36/343 (10%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL +  ++  A ++L +M  +G  P+ I Y+ ++ G CK G++ +A  +   MS  G
Sbjct: 617 LIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCG 676

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P V TY +++  MF + +   AI      L   C P ++TYT +I+ +C+     +A+
Sbjct: 677 YLPTVHTYTSLIDAMFKDRRLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKAL 736

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++L  M   GC+P++VTY SL++   K GK D ++ +   ++++G  PN +TY  L++  
Sbjct: 737 KLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHC 796

Query: 338 GSRGCWDAVDKILDIMNEA-------------------------------SHSPTVFT-- 364
            + G  D    +L  M +                                SH        
Sbjct: 797 CAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIASLGLLEELESHGMVSIAPV 856

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV---TYNTVLGALCKEGMLNEALQLLH 421
           Y +LI+   K G +++A+    +M+  +   +I    TY +++ ALC    L +A +L  
Sbjct: 857 YGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYS 916

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            +      P L  +  LI GL K     +A+ L   M + G++
Sbjct: 917 EITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEGVN 959



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 87/318 (27%), Positives = 154/318 (48%), Gaps = 7/318 (2%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           SS+G   E +    + ++  FC  GKL +A ++   M++   +P  H   +LI  + +  
Sbjct: 638 SSNG--CEPNHIIYDALIDGFCKVGKLDNAQEVFFRMSKCGYLPTVHTYTSLIDAMFKDR 695

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           R++ A KVL  M+ S   P+ +TY  M+ GLC+ G+ + A+ LL  M   GC P+V+TY 
Sbjct: 696 RLDLAIKVLSQMLESSCTPNVVTYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYT 755

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           +++  +  +GK   ++  +   + +GC P  +TY +LI   C    +  A  +L +M   
Sbjct: 756 SLIDGLGKSGKVDMSLQLFTQMITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQT 815

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
                +  Y S+V    K  K+  ++ ++  L S GM   +  Y  L+ S    G  +  
Sbjct: 816 YWPKYVQGYCSVVQGFSK--KFIASLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKA 873

Query: 347 DKILDIMNEASHSPTVF---TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
            ++   M E S S  +    TY  LI  LC    +++A   ++++  K   P++  +  +
Sbjct: 874 LELHKEMMEVSSSLNITSKDTYTSLIQALCLASQLEKAFELYSEITRKGVVPELSAFICL 933

Query: 404 LGALCKEGMLNEALQLLH 421
           +  L K    NEALQL +
Sbjct: 934 IKGLIKVNKWNEALQLCY 951



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 110/495 (22%), Positives = 196/495 (39%), Gaps = 89/495 (17%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           ++R   R     KA + L  +   G  P   TYN +V  L   GQ+     +  EMS  G
Sbjct: 178 IVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSELG 237

Query: 218 CEPDVITYNTILRTMFDNGK--------------------------------FKQAIGFW 245
              D  T     + +   G+                                F +AI F 
Sbjct: 238 FCTDKFTVGCFAQALCKEGRWSDALVMIEREDFKLDTVLCTQMISGLMEASLFDEAISFL 297

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
                  C P ++TY  L+    K+  +     ++  M  EGC+P+   +NSLV+  C  
Sbjct: 298 HRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHSYCNA 357

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS-------------------------- 339
             Y  A  ++N +   G  P  + YN  + S+ S                          
Sbjct: 358 RDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSPDLLALAEKVYEEMLASSCV 417

Query: 340 ---------------RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
                           G +D   +I+ +M      P   TY+ +I  LC+   V++A   
Sbjct: 418 LNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVEKAFLL 477

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F +M S    PD+ TY  ++ + CK G++ +A      +    CSP ++TY  L+    K
Sbjct: 478 FQEMKSVGVIPDVYTYTILIDSFCKVGLIEQARSWFDEMESVGCSPSVVTYTALLHAYLK 537

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL-KEIGKRGNKMRN- 502
              + +A  ++ +M++ G +P+ IT+  L+ G C+A + ++A ++  K IG   N   + 
Sbjct: 538 TKQVPQASDIFHRMVDAGCAPNTITYSALVDGLCKAGESQKACEVYAKMIGTSDNVGSDF 597

Query: 503 --------------SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
                           Y  +I GLCK+ KV  A ++L++M S+  +P+  ++  ++    
Sbjct: 598 YFEGEHTDSIAPNVVTYGALIDGLCKAHKVVDAQELLDVMSSNGCEPNHIIYDALIDGFC 657

Query: 549 DDGMTEEAYKLWQKL 563
             G  + A +++ ++
Sbjct: 658 KVGKLDNAQEVFFRM 672



 Score =  100 bits (248), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 75/309 (24%), Positives = 134/309 (43%), Gaps = 11/309 (3%)

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           +++ + C+    A+A+E L  +   G  P   TYN+LV      G+ D    V   +   
Sbjct: 177 VIVRKCCRHGAWAKALEELGRLKDFGYRPSGATYNALVQVLATAGQMDMGFRVQKEMSEL 236

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G   +  T      +L   G W   D ++ I  E     TV     +I+GL +  L D A
Sbjct: 237 GFCTDKFTVGCFAQALCKEGRWS--DALVMIEREDFKLDTVLCTQ-MISGLMEASLFDEA 293

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           I+  ++M   +C P++VTY T+L    K+  L    +++ ++    C+P    +N+L+  
Sbjct: 294 ISFLHRMRCNSCIPNVVTYRTLLAGFLKKKQLGWCKRIISMMMNEGCNPNPSLFNSLVHS 353

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
                    A  L  +M   G  P  + +   I   C  +++    DLL    K   +M 
Sbjct: 354 YCNARDYPYAYKLLNRMAGCGCPPGYVVYNIFIGSICSGEELPSP-DLLALAEKVYEEML 412

Query: 502 NSAYRL-------VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
            S+  L           LC   K D A Q+++LM+   + PD + +S ++  + +    E
Sbjct: 413 ASSCVLNKVNTANFARCLCGMGKFDKAFQIIKLMMRKGFVPDTSTYSKVITFLCEAMKVE 472

Query: 555 EAYKLWQKL 563
           +A+ L+Q++
Sbjct: 473 KAFLLFQEM 481



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/241 (19%), Positives = 100/241 (41%), Gaps = 36/241 (14%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G+   A KL+ +M +R   P+     +LI GL +  +++ + ++   M
Sbjct: 718 TYTAMIDGLCRIGECQKALKLLSMMEKRGCNPNVVTYTSLIDGLGKSGKVDMSLQLFTQM 777

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS--------------VSGCEPDVIT 224
           +  G  P+ +TY +++   C  G +  A +LL EM               V G     I 
Sbjct: 778 ITQGCAPNYVTYRVLINHCCAAGLLDEAHSLLSEMKQTYWPKYVQGYCSVVQGFSKKFIA 837

Query: 225 -------------------YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI---TYTI 262
                              Y  ++ +    G+ ++A+   K+ +       +    TYT 
Sbjct: 838 SLGLLEELESHGMVSIAPVYGLLIDSFSKAGRLEKALELHKEMMEVSSSLNITSKDTYTS 897

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI+ +C    + +A E+  ++  +G  P++  +  L+    K  K+++A+ +  ++   G
Sbjct: 898 LIQALCLASQLEKAFELYSEITRKGVVPELSAFICLIKGLIKVNKWNEALQLCYSMCDEG 957

Query: 323 M 323
           +
Sbjct: 958 V 958


>gi|225452994|ref|XP_002263091.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 588

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/488 (29%), Positives = 242/488 (49%), Gaps = 6/488 (1%)

Query: 95  TITKKSHDPSLPS----SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           +I K  H  +L S     D   +  D  T   ++ + C   ++  A   +  + +    P
Sbjct: 79  SIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQP 138

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D      LIRGL    +I +A  +   M+  G  P+ +TY  ++ GLCK G   +AI LL
Sbjct: 139 DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 198

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
             M    C+P+V+ ++T++ ++  + +  +A   + + + KG  P ++TY  LI  +CK 
Sbjct: 199 RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           C       ++++M      PD+ T N++V+  CK+G   +A  V++ ++ RG+EPN +TY
Sbjct: 259 CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY 318

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N L+     R   D   K+ D M        V +YN LING CK   VD+A+  F +M  
Sbjct: 319 NALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSR 378

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +   P+ VTYNT++  LC  G L +A+ L H +      P L+TY TL D L K   ++K
Sbjct: 379 QELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDK 438

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           AM L   +  +   PD   + T++ G CRA ++E+A DL   +  +G +     Y ++IH
Sbjct: 439 AMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIH 498

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE--WKV 568
           GLCK   +  A ++   M  +   P+D  ++ I +    +       +L ++++   + V
Sbjct: 499 GLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSV 558

Query: 569 FEKGTTLL 576
               TTLL
Sbjct: 559 DVSTTTLL 566



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 213/436 (48%), Gaps = 35/436 (8%)

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
           +  + +++A      M+     P T+ +N ++  + K     + ++L  +M   G  PDV
Sbjct: 46  LHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDV 105

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            T   ++ ++    +   A       L+ G  P   T+T LI  +C +  I  A+ + D 
Sbjct: 106 YTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 165

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQG-----------------------------------K 307
           M  EG  P++VTY +L+N  CK G                                   +
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
             +A  + + ++++G+ PN +TYN+L+H L     W  V  +++ M ++   P VFT N 
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +++ LCK G+V  A +  + M+ +  +P++VTYN ++   C    ++ A+++   +    
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C   +I+YNTLI+G  K   ++KAM L+ +M    ++P+ +T+ TLI G C   ++++A+
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L  E+  RG       YR +   LCK++ +D A+ +L+ +  S + PD  +++TI+  +
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 548 ADDGMTEEAYKLWQKL 563
              G  E+A  L+  L
Sbjct: 466 CRAGELEDARDLFSNL 481



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 158/340 (46%)

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           ++NT            +A+  +   L K  PP  + +  L+  + K    +  + +   M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G  PD+ T   ++N  C   + D A   +  +L  G +P++ T+ TL+  L   G  
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
                + D M      P V TY  LINGLCK G    AI     M   NCQP++V ++T+
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + +LCK+  + EA  +   +     SP ++TYN+LI GL K    +    L  +M+++ I
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD  T  T++   C+   V EA D++  +  RG +     Y  ++ G C   +VD+A++
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           V + M+      +   ++T++         ++A  L++++
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM 376



 Score = 85.1 bits (209), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 97/201 (48%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           ++N   +    +  +D A+++FN+M+ K   P  V +N +L ++ K    +  L L   +
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
           +     P + T   +I+ L     ++ A     ++++ G  PD  T  TLI G C   ++
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            EA+ L  ++   G +     Y  +I+GLCK      AI++L  M     +P+  VFST+
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 544 VKKVADDGMTEEAYKLWQKLI 564
           +  +  D    EA+ ++ ++I
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMI 237



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 46/160 (28%), Positives = 68/160 (42%), Gaps = 35/160 (21%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L + +G   + D +    IL   C  G+L DA  L                 NL      
Sbjct: 443 LKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFS---------------NL------ 481

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
                 +SK LQ        P+  TYN+M+ GLCK+G +  A  L  EM+ +GC P+  T
Sbjct: 482 ------SSKGLQ--------PNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCT 527

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           YN I R    N +  + I   ++ L +G    + T T+L+
Sbjct: 528 YNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLV 567


>gi|38344241|emb|CAE02059.2| OJ991113_30.18 [Oryza sativa Japonica Group]
          Length = 736

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 228/455 (50%), Gaps = 18/455 (3%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  GK   A +LI  M R+  +PD      +I  L    ++EKA  + Q M M G  PD
Sbjct: 198 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 257

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY +++   CK G I  A  L +EM   GC P V+TY  ++       +  QA   + 
Sbjct: 258 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 317

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL----------DDMAIEGC------SP 290
             +  GC P  +TY  L++ +CK   I++A EV           D      C      +P
Sbjct: 318 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 377

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           ++VTY +LV+  CK  K D A  +++ +LS G EPN I Y+ L+      G  D+  ++ 
Sbjct: 378 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 437

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M +  + P+V TY  LI+ + K G +D A+   +QM+  +C P++VTY  ++  LC+ 
Sbjct: 438 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 497

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G   +AL+LL L+    CSP ++TY  LIDGL K G ++ ++ L+ QM   G SP+ +T+
Sbjct: 498 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 557

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           R LI   C A  +++A  LL E+ +         YR  I G   SK    ++ +LE M S
Sbjct: 558 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMES 615

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               P   V+  ++   +  G  E A +L ++++E
Sbjct: 616 YGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 650



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 219/472 (46%), Gaps = 25/472 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T        C  G+  DA   +D++ R +   D   C ++I GL+     ++A   L
Sbjct: 9   DRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFL 65

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +  +P+ +TY  ++ G  K+ Q+     +++ M   GC P+   +N+++ +  + 
Sbjct: 66  HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNE 125

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR------AIEVLDDMAIEGCS 289
             +  A          GCPP  + Y I I  +C Q  +        A ++  +M    C 
Sbjct: 126 KDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCV 185

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            + V   +     C  GK+D A  +I  ++ +G  P++ TY+ ++  L      +    +
Sbjct: 186 LNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLL 245

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M     +P V+TY ILI+  CK GL+++A   F +M S  C P +VTY  ++ A  K
Sbjct: 246 FQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLK 305

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM---------- 459
              + +A  + H +  + C P  +TY  L+DGL K G + KA  +Y +++          
Sbjct: 306 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 365

Query: 460 ------ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
                  + ++P+ +T+  L+ G C+A +V+ A +LL  +   G +  +  Y  +I G C
Sbjct: 366 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 425

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K+ K+D A +V   M    Y P    +++++ ++  DG  + A K+  ++++
Sbjct: 426 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 477



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 208/463 (44%), Gaps = 51/463 (11%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   ++ +FC  G +  A  L + M      P       LI   ++  ++ +A+
Sbjct: 254 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 313

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG----------CE--- 219
            +   MV +G  P+ +TY  +V GLCK G I  A  +  ++  +           CE   
Sbjct: 314 DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 373

Query: 220 ---PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
              P+V+TY  ++  +    K   A       L  GC P  I Y  LI+  CK   I  A
Sbjct: 374 TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSA 433

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            EV   M   G  P + TY SL++   K G+ D A+ V++ +L     PN +TY  ++  
Sbjct: 434 QEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDG 493

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G  +   K+L +M E   SP V TY  LI+GL K G +D +++ F QM  K C P+
Sbjct: 494 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPN 553

Query: 397 IVTYNTVLGALCKEGMLNEALQLL---------HLLNGSSCS------------------ 429
            VTY  ++  LC  G+L++A  LL           L G  C+                  
Sbjct: 554 YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEM 613

Query: 430 ------PCLITYNTLIDGLAKKGCMEKAMVLYGQMME--NGISPDDITHRTLIWGFCRAD 481
                 P    Y  LID  +K G +E AM L+ +MME  + +  D+  + +LI   C A 
Sbjct: 614 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 673

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           QVEEA  L  E+ +RG     S +  +I GL + KK D A+Q+
Sbjct: 674 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 716



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/513 (23%), Positives = 224/513 (43%), Gaps = 59/513 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +L  F  + +L    ++I++M      P+     +L+           A K+L  M
Sbjct: 79  TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 138

Query: 179 VMSGGVPDTITYNMMVGGLCKR-------------------------------------- 200
              G  P  + YN+ +G +C +                                      
Sbjct: 139 TTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 198

Query: 201 ---GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
              G+   A  L+ EM   G  PD  TY+ ++  +    K ++A   +++    G  P +
Sbjct: 199 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 258

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            TYTILI+  CK   I +A  + ++M   GCSP +VTY +L++   K  +   A  + + 
Sbjct: 259 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 318

Query: 318 LLSRGMEPNSITYNTLLHSLGSR--------------GCWDAVDKILDIMNEASH--SPT 361
           ++  G  PN +TY  L+  L                 G  D+ D       E  H  +P 
Sbjct: 319 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 378

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TY  L++GLCK   VD A    + M+S  C+P+ + Y+ ++   CK G ++ A ++  
Sbjct: 379 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 438

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +      P + TY +LID + K G ++ AM +  QM+++  +P+ +T+  +I G CR  
Sbjct: 439 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 498

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           + E+A+ LL  + ++G       Y  +I GL K+ K+D+++ +   M      P+   + 
Sbjct: 499 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 558

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE--WKVFEKG 572
            ++  +   G+ ++A  L  ++ +  W  + +G
Sbjct: 559 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQG 591



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 4/342 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+ GL +  +++ A ++L  M+ SG  P+ I Y+ ++ G CK G+I SA  +  +M+  G
Sbjct: 385 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 444

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P V TY +++  MF +G+   A+      L+  C P ++TYT +I+ +C+     +A+
Sbjct: 445 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 504

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++L  M  +GCSP++VTY +L++   K GK D ++ +   +  +G  PN +TY  L++ L
Sbjct: 505 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 564

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            + G  D    +L  M +      +  Y   I G  K  +    I    +M S    P  
Sbjct: 565 CAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI--LEEMESYGTVPIA 622

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLN--GSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
             Y  ++    K G L  A++L   +    SS       Y +LI  L     +E+A  LY
Sbjct: 623 PVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLY 682

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
            +M   G  P+      LI G     + +EA+ L   I   G
Sbjct: 683 SEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 724



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 159/369 (43%), Gaps = 9/369 (2%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  SG   D  T       LCK G+   A+ +++       + D +    ++  + +   
Sbjct: 1   MSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDF---KLDTVLCTHMISGLMEASY 57

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A+ F        C P ++TY  L+    K+  +     +++ M  EGC+P+   +NS
Sbjct: 58  FDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNS 117

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS------LGSRGCWDAVDKILD 351
           LV+  C +  Y  A  ++N + + G  P  + YN  + S      L S    D  +KI  
Sbjct: 118 LVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYG 177

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M  A+              LC  G  D+A     +M+ K   PD  TY+ V+  LC   
Sbjct: 178 EMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHAT 237

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            + +A  L   +     +P + TY  LID   K G +E+A  L+ +M   G SP  +T+ 
Sbjct: 238 KVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYT 297

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            LI  + +A QV +A D+   +   G +  +  Y  ++ GLCK+  +  A +V   +I +
Sbjct: 298 ALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGT 357

Query: 532 RYKPDDTVF 540
               D   +
Sbjct: 358 SDSADSDFY 366



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 170/385 (44%), Gaps = 5/385 (1%)

Query: 82  SHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           S    V  KL G + +  S D   P  D   +  +  T   ++   C   K+  A +L+D
Sbjct: 345 SKAFEVYAKLIGTSDSADS-DFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 403

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            M      P+      LI G  +  +I+ A +V   M   G +P   TY  ++  + K G
Sbjct: 404 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 463

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++  A+ +L +M    C P+V+TY  ++  +   G+ ++A+        KGC P ++TYT
Sbjct: 464 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 523

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            LI+ + K   I  ++++   M+ +GCSP+ VTY  L+N  C  G  D A L++  +   
Sbjct: 524 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 583

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
                   Y   +   G    + A   IL+ M      P    Y +LI+   K G ++ A
Sbjct: 584 YWPKYLQGYRCAIQ--GFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 641

Query: 382 INSFNQM--VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +    +M  V  + + D   Y +++ ALC    + EA +L   +      P L  +  LI
Sbjct: 642 MELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLI 701

Query: 440 DGLAKKGCMEKAMVLYGQMMENGIS 464
            GL +    ++A+ L   +   G++
Sbjct: 702 KGLVEVKKWDEALQLCYGICHEGVN 726


>gi|222629097|gb|EEE61229.1| hypothetical protein OsJ_15269 [Oryza sativa Japonica Group]
          Length = 855

 Score =  237 bits (605), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 228/455 (50%), Gaps = 18/455 (3%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  GK   A +LI  M R+  +PD      +I  L    ++EKA  + Q M M G  PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY +++   CK G I  A  L +EM   GC P V+TY  ++       +  QA   + 
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL----------DDMAIEGC------SP 290
             +  GC P  +TY  L++ +CK   I++A EV           D      C      +P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           ++VTY +LV+  CK  K D A  +++ +LS G EPN I Y+ L+      G  D+  ++ 
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M +  + P+V TY  LI+ + K G +D A+   +QM+  +C P++VTY  ++  LC+ 
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G   +AL+LL L+    CSP ++TY  LIDGL K G ++ ++ L+ QM   G SP+ +T+
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           R LI   C A  +++A  LL E+ +         YR  I G   SK    ++ +LE M S
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMES 680

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               P   V+  ++   +  G  E A +L ++++E
Sbjct: 681 YGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 219/472 (46%), Gaps = 25/472 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T        C  G+  DA   +D++ R +   D   C ++I GL+     ++A   L
Sbjct: 74  DRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFL 130

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +  +P+ +TY  ++ G  K+ Q+     +++ M   GC P+   +N+++ +  + 
Sbjct: 131 HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNE 190

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR------AIEVLDDMAIEGCS 289
             +  A          GCPP  + Y I I  +C Q  +        A ++  +M    C 
Sbjct: 191 KDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCV 250

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            + V   +     C  GK+D A  +I  ++ +G  P++ TY+ ++  L      +    +
Sbjct: 251 LNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLL 310

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M     +P V+TY ILI+  CK GL+++A   F +M S  C P +VTY  ++ A  K
Sbjct: 311 FQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLK 370

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM---------- 459
              + +A  + H +  + C P  +TY  L+DGL K G + KA  +Y +++          
Sbjct: 371 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 430

Query: 460 ------ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
                  + ++P+ +T+  L+ G C+A +V+ A +LL  +   G +  +  Y  +I G C
Sbjct: 431 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 490

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K+ K+D A +V   M    Y P    +++++ ++  DG  + A K+  ++++
Sbjct: 491 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 208/463 (44%), Gaps = 51/463 (11%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   ++ +FC  G +  A  L + M      P       LI   ++  ++ +A+
Sbjct: 319 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 378

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG----------CE--- 219
            +   MV +G  P+ +TY  +V GLCK G I  A  +  ++  +           CE   
Sbjct: 379 DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 438

Query: 220 ---PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
              P+V+TY  ++  +    K   A       L  GC P  I Y  LI+  CK   I  A
Sbjct: 439 TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSA 498

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            EV   M   G  P + TY SL++   K G+ D A+ V++ +L     PN +TY  ++  
Sbjct: 499 QEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDG 558

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G  +   K+L +M E   SP V TY  LI+GL K G +D +++ F QM  K C P+
Sbjct: 559 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPN 618

Query: 397 IVTYNTVLGALCKEGMLNEALQLL---------HLLNGSSCS------------------ 429
            VTY  ++  LC  G+L++A  LL           L G  C+                  
Sbjct: 619 YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEM 678

Query: 430 ------PCLITYNTLIDGLAKKGCMEKAMVLYGQMME--NGISPDDITHRTLIWGFCRAD 481
                 P    Y  LID  +K G +E AM L+ +MME  + +  D+  + +LI   C A 
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 738

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           QVEEA  L  E+ +RG     S +  +I GL + KK D A+Q+
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/513 (23%), Positives = 224/513 (43%), Gaps = 59/513 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +L  F  + +L    ++I++M      P+     +L+           A K+L  M
Sbjct: 144 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 203

Query: 179 VMSGGVPDTITYNMMVGGLCKR-------------------------------------- 200
              G  P  + YN+ +G +C +                                      
Sbjct: 204 TTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 263

Query: 201 ---GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
              G+   A  L+ EM   G  PD  TY+ ++  +    K ++A   +++    G  P +
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            TYTILI+  CK   I +A  + ++M   GCSP +VTY +L++   K  +   A  + + 
Sbjct: 324 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 383

Query: 318 LLSRGMEPNSITYNTLLHSLGSR--------------GCWDAVDKILDIMNEASH--SPT 361
           ++  G  PN +TY  L+  L                 G  D+ D       E  H  +P 
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TY  L++GLCK   VD A    + M+S  C+P+ + Y+ ++   CK G ++ A ++  
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +      P + TY +LID + K G ++ AM +  QM+++  +P+ +T+  +I G CR  
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           + E+A+ LL  + ++G       Y  +I GL K+ K+D+++ +   M      P+   + 
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 623

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE--WKVFEKG 572
            ++  +   G+ ++A  L  ++ +  W  + +G
Sbjct: 624 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQG 656



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 176/389 (45%), Gaps = 9/389 (2%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P  +TYN +V  L   GQ+     +  EMS SG   D  T       +   G++  A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   +   R+      +  T +I  + +      A+  L  M    C P++VTY +L++ 
Sbjct: 95  LDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             K+ +      +IN +++ G  PN   +N+L+HS  +   +    K+L+ M      P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 362 VFTYNILINGLCKY------GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              YNI I  +C         L+D A   + +M++ NC  + V        LC  G  ++
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A QL+  +      P   TY+ +I  L     +EKA +L+ +M   G++PD  T+  LI 
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            FC+A  +E+A  L +E+   G       Y  +IH   K+K+V  A  +   M+ +  +P
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +D  +  +V  +   G   +A++++ KLI
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLI 420



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/389 (25%), Positives = 168/389 (43%), Gaps = 9/389 (2%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L++ L    +++   +V + M  SG   D  T       LCK G+   A   LD +    
Sbjct: 46  LVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA---LDMIERED 102

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            + D +    ++  + +   F +A+ F        C P ++TY  L+    K+  +    
Sbjct: 103 FKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCK 162

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS- 336
            +++ M  EGC+P+   +NSLV+  C +  Y  A  ++N + + G  P  + YN  + S 
Sbjct: 163 RIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 222

Query: 337 -----LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
                L S    D  +KI   M  A+              LC  G  D+A     +M+ K
Sbjct: 223 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 282

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              PD  TY+ V+  LC    + +A  L   +     +P + TY  LID   K G +E+A
Sbjct: 283 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 342

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             L+ +M   G SP  +T+  LI  + +A QV +A D+   +   G +  +  Y  ++ G
Sbjct: 343 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 402

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           LCK+  +  A +V   +I +    D   +
Sbjct: 403 LCKAGNISKAFEVYAKLIGTSDSADSDFY 431



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 178/399 (44%), Gaps = 9/399 (2%)

Query: 82  SHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           S    V  KL G + +  S D   P  D   +  +  T   ++   C   K+  A +L+D
Sbjct: 410 SKAFEVYAKLIGTSDSADS-DFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 468

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            M      P+      LI G  +  +I+ A +V   M   G +P   TY  ++  + K G
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++  A+ +L +M    C P+V+TY  ++  +   G+ ++A+        KGC P ++TYT
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            LI+ + K   I  ++++   M+ +GCSP+ VTY  L+N  C  G  D A L++  +   
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
                   Y   +   G    + A   IL+ M      P    Y +LI+   K G ++ A
Sbjct: 649 YWPKYLQGYRCAIQ--GFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706

Query: 382 INSFNQM--VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +    +M  V  + + D   Y +++ ALC    + EA +L   +      P L  +  LI
Sbjct: 707 MELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLI 766

Query: 440 DGLAKKGCMEKAMVL-YGQMMENGISPDDITHRTLIWGF 477
            GL +    ++A+ L YG   E G+    +++ T I+ F
Sbjct: 767 KGLVEVKKWDEALQLCYGICHEVGLL---LSYTTQIFLF 802



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 61/297 (20%), Positives = 101/297 (34%), Gaps = 73/297 (24%)

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
           R C  A     D + +  + P+  TYN L+  L   G VD       +M       D  T
Sbjct: 18  RTCSHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFT 77

Query: 400 YNTVLGALCKEG--------------------------------MLNEALQLLHLLNGSS 427
                 ALCKEG                                  +EA+  LH +  +S
Sbjct: 78  VGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNS 137

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C P ++TY TL+ G  KK  +     +   MM  G +P+     +L+  +C       A 
Sbjct: 138 CIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAY 197

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV----------------------------- 518
            LL  +   G       Y + I  +C  +K+                             
Sbjct: 198 KLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVA 257

Query: 519 ------------DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                       D A Q+++ M+   + PD + +S ++  +      E+A+ L+Q++
Sbjct: 258 NFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 314


>gi|357164338|ref|XP_003580022.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Brachypodium distachyon]
          Length = 966

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/455 (30%), Positives = 229/455 (50%), Gaps = 18/455 (3%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  GK   A +++  M R+  +PD      +I  L +  ++EK+  + Q M  +G  PD
Sbjct: 427 LCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFLLFQEMKRAGVNPD 486

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY +++   CK G I  A +  DEM   GC P+V+TY  +L     + +  QA   + 
Sbjct: 487 VYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAHDIFH 546

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD-----------DMAIEG-----CSP 290
             +   C P  +TY+ LI+ +CK   I +A EV +           D   EG      +P
Sbjct: 547 RMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTCTIAP 606

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           ++VTY +L++  CK  K  DA  +++ +L+ G EPN I Y+ L+      G  D   ++ 
Sbjct: 607 NVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVF 666

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M +  + P+V TY  LI+ + K G +D A+   ++M++ +C P++VTY  ++  L K 
Sbjct: 667 LRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKV 726

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G + +AL LL L+    CSP ++TY  LIDGL K G  + ++ L+ QM   G +P+ +T+
Sbjct: 727 GEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTY 786

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           R LI   C A  ++EA  LL E+           Y   + G   SKK   ++ +LE M S
Sbjct: 787 RVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGF--SKKFIASLGLLEEMES 844

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               P   V+  ++   +  G  E A +L ++L+E
Sbjct: 845 HETVPIAPVYGMLIDSFSKAGRLETALELHKELVE 879



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/472 (26%), Positives = 221/472 (46%), Gaps = 27/472 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T     Q  C  G+  DA   ++++ + +   D   C  +I GL+      +A   L
Sbjct: 238 DRSTIGYFAQALCKVGRWADA---LNMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFL 294

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +  +P+ +TY  ++ G  K+ Q      +++ M   GC P+   +N+++    + 
Sbjct: 295 HRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNA 354

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD-------DMAIEGC 288
           G +  A   +      G PP  + Y I I  +C Q  +  A E+LD       +M    C
Sbjct: 355 GDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNA-ELLDLVEKVYEEMLAASC 413

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             + V   +     C  GK++ A  ++  ++ +G  P++ TY  ++  L      +    
Sbjct: 414 VLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKVEKSFL 473

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M  A  +P V+TY ILI+  CK GL+++A + F++M S  C P++VTY  +L A  
Sbjct: 474 LFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYL 533

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG------ 462
           K   L +A  + H +  ++C P  +TY+ LIDGL K G ++KA  +Y +++         
Sbjct: 534 KSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESD 593

Query: 463 ----------ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
                     I+P+ +T+  LI G C+A +V +A +LL  +   G +     Y  +I G 
Sbjct: 594 FYFEGNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGF 653

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           CK  K+D A +V   M    Y P    +++++ ++  DG  + A K+  +++
Sbjct: 654 CKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEML 705



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 131/466 (28%), Positives = 211/466 (45%), Gaps = 21/466 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   ++ +FC  G +  A    D M      P+      L+   ++  ++ +A 
Sbjct: 483 VNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTALLHAYLKSKQLIQAH 542

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSG-------------- 217
            +   MV +   P+ +TY+ ++ GLCK G+I+ A  + +++   SG              
Sbjct: 543 DIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLIGTSGNVESDFYFEGNDTC 602

Query: 218 -CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
              P+V+TY  ++  +    K   A       L  GC P  I Y  LI+  CK   I  A
Sbjct: 603 TIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNA 662

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            EV   M   G  P + TY SL++   K G+ D A+ V++ +L+    PN +TY  ++  
Sbjct: 663 QEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDG 722

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G  +    +L +M E   SP V TY  LI+GL K G  D ++  F QM SK C P+
Sbjct: 723 LSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPN 782

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            VTY  ++   C  G+L+EA  LL  +  +     L  Y+  + G +KK     ++ L  
Sbjct: 783 YVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKK--FIASLGLLE 840

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK---EIGKRGNKMRNSAYRLVIHGLC 513
           +M  +   P    +  LI  F +A ++E A++L K   E+    N      Y  +I  LC
Sbjct: 841 EMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALC 900

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            + +V+ A  +   M      PD  VF ++VK + +    +EA +L
Sbjct: 901 LASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQL 946



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 105/420 (25%), Positives = 184/420 (43%), Gaps = 23/420 (5%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+R   R    ++A + L  +   G  P  +TYN +V  L   GQ+     +  EMS SG
Sbjct: 175 LVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASG 234

Query: 218 CEPDVITYNTILRTMFDNGKFKQA---IGFWKDQL----RKGCPPYLITYTILIEQVCKQ 270
              D  T           G F QA   +G W D L    ++      +  T +I  + + 
Sbjct: 235 FCMDRSTI----------GYFAQALCKVGRWADALNMLEKEDFNLDTVLCTQMISGLMEA 284

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
                A+  L  M    C P++VTY +L++   K+ ++     +IN +++ G  PN   +
Sbjct: 285 SLFNEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLF 344

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC------KYGLVDRAINS 384
           N+L+H   + G +    K+ + M      P    YNI I  +C         L+D     
Sbjct: 345 NSLVHGYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNAELLDLVEKV 404

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           + +M++ +C  + V        LC  G   +A Q+L  +      P   TY  +I  L +
Sbjct: 405 YEEMLAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQ 464

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              +EK+ +L+ +M   G++PD  T+  LI  FC+A  +E+A     E+   G       
Sbjct: 465 AKKVEKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVT 524

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  ++H   KSK++  A  +   M+ +   P+   +S ++  +   G  ++A ++++KLI
Sbjct: 525 YTALLHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSALIDGLCKAGEIQKACEVYEKLI 584



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/346 (25%), Positives = 164/346 (47%), Gaps = 6/346 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C   K++DA +L+D M      P+      LI G  +I +I+ A +V   M
Sbjct: 610 TYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQIVYDALIDGFCKIGKIDNAQEVFLRM 669

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +P   TY  ++  + K G++  A+ +L EM    C P+V+TY  ++  +   G+ 
Sbjct: 670 TKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSEMLNDSCNPNVVTYTAMIDGLSKVGEI 729

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+        KGC P ++TYT LI+ + K      ++++   M  +GC+P+ VTY  L
Sbjct: 730 EKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGKADASLKLFKQMNSKGCAPNYVTYRVL 789

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C  G  D+A L+++ +       +   Y+  +     +  + A   +L+ M     
Sbjct: 790 INHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHCAVQGFSKK--FIASLGLLEEMESHET 847

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT---YNTVLGALCKEGMLNE 415
            P    Y +LI+   K G ++ A+    ++V  +   ++ +   Y +++ ALC    + E
Sbjct: 848 VPIAPVYGMLIDSFSKAGRLETALELHKELVEVSSSLNMTSTGMYASLIQALCLASQVEE 907

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL-YGQMME 460
           A  L   +      P LI + +L+ GL +    ++A+ L YG+  E
Sbjct: 908 AFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWDEALQLCYGRCHE 953



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 164/367 (44%), Gaps = 8/367 (2%)

Query: 60  GLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDE 117
           G  GNV  D   E   D  +   +V+     + GL   +K  D    L +      E ++
Sbjct: 585 GTSGNVESDFYFE-GNDTCTIAPNVVTYGALIDGLCKAQKVSDAHELLDAMLAAGCEPNQ 643

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
              + ++  FC  GK+ +A ++   M +   +P  H   +LI  + +  R++ A KVL  
Sbjct: 644 IVYDALIDGFCKIGKIDNAQEVFLRMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSE 703

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+     P+ +TY  M+ GL K G+I  A+ LL  M   GC P+V+TY  ++  +   GK
Sbjct: 704 MLNDSCNPNVVTYTAMIDGLSKVGEIEKALNLLSLMEEKGCSPNVVTYTALIDGLGKTGK 763

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              ++  +K    KGC P  +TY +LI   C    +  A  +LD+M        +  Y+ 
Sbjct: 764 ADASLKLFKQMNSKGCAPNYVTYRVLINHCCAAGLLDEAHLLLDEMKHTHWPKHLQGYHC 823

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
            V    K  K+  ++ ++  + S    P +  Y  L+ S    G  +   ++   + E S
Sbjct: 824 AVQGFSK--KFIASLGLLEEMESHETVPIAPVYGMLIDSFSKAGRLETALELHKELVEVS 881

Query: 358 HSPTVFT---YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            S  + +   Y  LI  LC    V+ A   + +M  K   PD++ + +++  L +    +
Sbjct: 882 SSLNMTSTGMYASLIQALCLASQVEEAFTLYTEMTRKGIVPDLIVFVSLVKGLIEVNKWD 941

Query: 415 EALQLLH 421
           EALQL +
Sbjct: 942 EALQLCY 948



 Score =  112 bits (279), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 85/394 (21%), Positives = 168/394 (42%), Gaps = 11/394 (2%)

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N++V   C+ G    A+  L  +   G  P  +TYN +++ +   G+ +      K+   
Sbjct: 173 NVLVRRCCRHGLWDEALEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSA 232

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G      T     + +CK   + R  + L+ +  E  + D V    +++   +   +++
Sbjct: 233 SGFCMDRSTIGYFAQALCK---VGRWADALNMLEKEDFNLDTVLCTQMISGLMEASLFNE 289

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+  ++ +      PN +TY TLL     +  +    +I+++M     +P    +N L++
Sbjct: 290 AMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVH 349

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN------ 424
           G C  G    A   FN+M +    P  V YN  +G++C +  L  A +LL L+       
Sbjct: 350 GYCNAGDYAYAYKLFNRMTTCGSPPGYVAYNIFIGSICGQEELPNA-ELLDLVEKVYEEM 408

Query: 425 -GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
             +SC    +        L   G  EKA  +  +MM  G  PD  T+  +I   C+A +V
Sbjct: 409 LAASCVLNKVNTANFSRCLCGVGKFEKAFQILKEMMRKGFVPDTSTYTKVITFLCQAKKV 468

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           E++  L +E+ + G       Y ++I   CK+  ++ A    + M S    P+   ++ +
Sbjct: 469 EKSFLLFQEMKRAGVNPDVYTYTILIDSFCKAGLIEQARSWFDEMRSVGCSPNVVTYTAL 528

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           +          +A+ ++ ++++   +    T  A
Sbjct: 529 LHAYLKSKQLIQAHDIFHRMVDAACYPNAVTYSA 562



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 50/243 (20%), Positives = 96/243 (39%), Gaps = 5/243 (2%)

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G       Y+ L   LG        +++L  + E          N+L+   C++GL D A
Sbjct: 129 GYSHTGACYDALAEILGFEDPARTAERLLREIGEDDREVLRRLLNVLVRRCCRHGLWDEA 188

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +    ++     +P  VTYN ++  L   G +    ++   ++ S       T       
Sbjct: 189 LEELGRLKDFGYRPSAVTYNALVQVLASAGQVEMGFRVQKEMSASGFCMDRSTIGYFAQA 248

Query: 442 LAKKGCMEKAMVLYGQMME-NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           L K G    A+     M+E    + D +    +I G   A    EA+  L  +       
Sbjct: 249 LCKVGRWADAL----NMLEKEDFNLDTVLCTQMISGLMEASLFNEAMSFLHRMRCNSCIP 304

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               YR ++ G  K K+     +++ +M++    P+ ++F+++V    + G    AYKL+
Sbjct: 305 NVVTYRTLLSGFLKKKQFGWCKRIINMMMTEGCNPNPSLFNSLVHGYCNAGDYAYAYKLF 364

Query: 561 QKL 563
            ++
Sbjct: 365 NRM 367


>gi|380875521|gb|AFF27500.1| PPR domain-containing protein [Oryza sativa Indica Group]
          Length = 742

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 141/456 (30%), Positives = 237/456 (51%), Gaps = 10/456 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    N +L       K+     +   M  R   PD      L++ L R  ++  A 
Sbjct: 142 IQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAV 201

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ M   G  PD  T+  ++ G  + G I +A+ +   M   GC    +T N ++   
Sbjct: 202 LMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGY 261

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+ + A+G+ + ++  G  P  ITY   +  +C+   +  A++V+D M  EG  PD+
Sbjct: 262 CKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDV 321

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSRGCWDAVDKIL 350
            TYN +VN  CK G+ ++A  ++N ++ RG  P+  T+NTL+ +L  G+R     +++ L
Sbjct: 322 FTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNR-----LEEAL 376

Query: 351 DIMNEAS---HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           D+  + +    SP V+T+NILIN LCK G    A+  F +M +  C PD VTYNT++  L
Sbjct: 377 DLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLIDNL 436

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C  G L +AL LL  +  + C    ITYNT+IDGL KK  +E+A  ++ QM   GIS + 
Sbjct: 437 CSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISRNA 496

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           IT  TLI G C+  ++++A  L+ ++   G +  N  Y  ++   CK   +  A  +LE 
Sbjct: 497 ITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADILET 556

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M ++ ++ D   + T++  +   G T+ A K+ + +
Sbjct: 557 MTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGM 592



 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 130/448 (29%), Positives = 232/448 (51%), Gaps = 1/448 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++ DA   I         PD       + GL + D +  A KV+ +M
Sbjct: 253 TVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVM 312

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD  TYN++V  LCK GQ+  A  +L++M   GC PD+ T+NT++  +    + 
Sbjct: 313 VQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRL 372

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+   +    KG  P + T+ ILI  +CK      A+ + ++M   GC+PD VTYN+L
Sbjct: 373 EEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTL 432

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  GK   A+ ++ ++ S G   ++ITYNT++  L  +   +  +++ D M+    
Sbjct: 433 IDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGI 492

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S    T+N LI+GLCK   +D A    NQM+S+  QP+ +TYN++L   CK+G + +A  
Sbjct: 493 SRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAAD 552

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +  +     ++TY TLI+GL K G  + A+ +   M   G+ P    +  ++    
Sbjct: 553 ILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRPTPKAYNPVLQSLF 612

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-SKKVDMAIQVLELMISSRYKPDD 537
           R + + +A+ L +E+ + G       Y++V  GLC+    +  A   +  M+   + P+ 
Sbjct: 613 RRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFMLEMVDKGFIPEF 672

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + F  + + + + GM +   +  + ++E
Sbjct: 673 SSFRMLAEGLLNLGMDDYFIRAIEIIME 700



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 236/453 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N +++  C   ++  A  +++ M+ R   PD      L++G +    IE A 
Sbjct: 177 IKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAAL 236

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V   M+  G     +T N+++ G CK G++  A+  + +    G EPD ITYNT +  +
Sbjct: 237 RVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGL 296

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N     A+      +++G  P + TY I++  +CK   +  A  +L+ M   GC PDI
Sbjct: 297 CQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDI 356

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+N+L+   C   + ++A+ +   +  +G+ P+  T+N L+++L   G      ++ + 
Sbjct: 357 TTFNTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEE 416

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M  +  +P   TYN LI+ LC  G + +A++    M S  C    +TYNT++  LCK+  
Sbjct: 417 MKNSGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMR 476

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA ++   ++    S   IT+NTLIDGL K   ++ A  L  QM+  G+ P++IT+ +
Sbjct: 477 IEEAEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNS 536

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++  +C+   +++A D+L+ +   G ++    Y  +I+GLCK+ +  +A++VL  M    
Sbjct: 537 ILTHYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKG 596

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +P    ++ +++ +       +A  L++++ E
Sbjct: 597 MRPTPKAYNPVLQSLFRRNNIRDALSLFREMAE 629



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 216/423 (51%), Gaps = 35/423 (8%)

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q+  + G   DT+ YN ++  L +  +++   ++  EM   G +PDV+T+NT+++ +   
Sbjct: 135 QLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKALCRA 194

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + + A+   ++   +G  P   T+T L++   ++  I  A+ V   M   GCS   VT 
Sbjct: 195 HQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSATKVTV 254

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK G+ +DA+  I   ++ G EP+ ITYNT ++ L          K++D+M +
Sbjct: 255 NVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMDVMVQ 314

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             H P VFTYNI++N LCK G ++ A    NQMV + C PDI T+NT++ ALC    L E
Sbjct: 315 EGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGNRLEE 374

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL L   +     SP + T+N LI+ L K G    A+ L+ +M  +G +PD++T+ TLI 
Sbjct: 375 ALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYNTLID 434

Query: 476 GFCRADQVEEAVDLLKEIGKRG----------------NKMRNS---------------- 503
             C   ++ +A+DLLK++   G                 KMR                  
Sbjct: 435 NLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEEAEEVFDQMDLQGISR 494

Query: 504 ---AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               +  +I GLCK KK+D A  ++  MIS   +P++  +++I+      G  ++A  + 
Sbjct: 495 NAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILTHYCKQGDIKKAADIL 554

Query: 561 QKL 563
           + +
Sbjct: 555 ETM 557



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/405 (32%), Positives = 203/405 (50%), Gaps = 23/405 (5%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           + ++ HDP            D  T N ++   C  G+L +A  +++ M  R  +PD    
Sbjct: 312 MVQEGHDP------------DVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTF 359

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
             LI  L   +R+E+A  + + + + G  PD  T+N+++  LCK G    A+ L +EM  
Sbjct: 360 NTLIAALCTGNRLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKN 419

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
           SGC PD +TYNT++  +   GK  +A+   KD    GCP   ITY  +I+ +CK+  I  
Sbjct: 420 SGCTPDEVTYNTLIDNLCSLGKLGKALDLLKDMESTGCPRSTITYNTIIDGLCKKMRIEE 479

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A EV D M ++G S + +T+N+L++  CK  K DDA  +IN ++S G++PN+ITYN++L 
Sbjct: 480 AEEVFDQMDLQGISRNAITFNTLIDGLCKDKKIDDAFGLINQMISEGLQPNNITYNSILT 539

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               +G       IL+ M        V TY  LINGLCK G    A+     M  K  +P
Sbjct: 540 HYCKQGDIKKAADILETMTANGFEVDVVTYGTLINGLCKAGRTQVALKVLRGMRIKGMRP 599

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC-MEKAMVL 454
               YN VL +L +   + +AL L   +      P  +TY  +  GL + G  +++A   
Sbjct: 600 TPKAYNPVLQSLFRRNNIRDALSLFREMAEVGEPPDALTYKIVFRGLCRGGGPIKEAFDF 659

Query: 455 YGQMMENGISPDDITHRTLIWG---------FCRA-DQVEEAVDL 489
             +M++ G  P+  + R L  G         F RA + + E VDL
Sbjct: 660 MLEMVDKGFIPEFSSFRMLAEGLLNLGMDDYFIRAIEIIMEKVDL 704



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 187/382 (48%), Gaps = 2/382 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            P    Y  ++  L   G +     L+ EM   G +  +   ++ L +      F  A+ 
Sbjct: 71  APGPEVYEEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVD 130

Query: 244 FWKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +QL+   G     + Y  L+  + +   +     V  +M   G  PD+VT+N+L+  
Sbjct: 131 LILNQLQPLFGIQADTVVYNHLLNVLVEGSKMKLLESVYSEMGARGIKPDVVTFNTLMKA 190

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+  +   AVL++  + SRG+ P+  T+ TL+      G  +A  ++   M E   S T
Sbjct: 191 LCRAHQVRTAVLMLEEMSSRGVAPDETTFTTLMQGFVEEGSIEAALRVKARMLEMGCSAT 250

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             T N+LING CK G V+ A+    Q ++   +PD +TYNT +  LC+   +  AL+++ 
Sbjct: 251 KVTVNVLINGYCKLGRVEDALGYIQQEIADGFEPDQITYNTFVNGLCQNDHVGHALKVMD 310

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           ++      P + TYN +++ L K G +E+A  +  QM++ G  PD  T  TLI   C  +
Sbjct: 311 VMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKGILNQMVDRGCLPDITTFNTLIAALCTGN 370

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++EEA+DL +++  +G       + ++I+ LCK     +A+++ E M +S   PD+  ++
Sbjct: 371 RLEEALDLARQVTVKGVSPDVYTFNILINALCKVGDPHLALRLFEEMKNSGCTPDEVTYN 430

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
           T++  +   G   +A  L + +
Sbjct: 431 TLIDNLCSLGKLGKALDLLKDM 452



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 157/317 (49%), Gaps = 41/317 (12%)

Query: 265 EQVCKQCGIARAIEVLD----DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           E++ ++ G   A++++     +M  EG    +   +S ++    Q  +DDAV +I N L 
Sbjct: 78  EEIIRKLGAVGALDLMKVLVAEMRREGHQVKLGVVHSFLDSYEGQQLFDDAVDLILNQLQ 137

Query: 321 R--GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G++ +++ YN LL                               N+L+ G  K  L+
Sbjct: 138 PLFGIQADTVVYNHLL-------------------------------NVLVEG-SKMKLL 165

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           +   + +++M ++  +PD+VT+NT++ ALC+   +  A+ +L  ++    +P   T+ TL
Sbjct: 166 E---SVYSEMGARGIKPDVVTFNTLMKALCRAHQVRTAVLMLEEMSSRGVAPDETTFTTL 222

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           + G  ++G +E A+ +  +M+E G S   +T   LI G+C+  +VE+A+  +++    G 
Sbjct: 223 MQGFVEEGSIEAALRVKARMLEMGCSATKVTVNVLINGYCKLGRVEDALGYIQQEIADGF 282

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +     Y   ++GLC++  V  A++V+++M+   + PD   ++ +V  +  +G  EEA  
Sbjct: 283 EPDQITYNTFVNGLCQNDHVGHALKVMDVMVQEGHDPDVFTYNIVVNCLCKNGQLEEAKG 342

Query: 559 LWQKLIEWKVFEKGTTL 575
           +  ++++       TT 
Sbjct: 343 ILNQMVDRGCLPDITTF 359


>gi|414871539|tpg|DAA50096.1| TPA: ATP binding protein [Zea mays]
          Length = 692

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 151/531 (28%), Positives = 252/531 (47%), Gaps = 74/531 (13%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN--QIPDFHFCINLIRGLIRIDRIEK 170
           V  +  T   +++  C+RG++ DA  ++D M RR    IP  +  I  +    R      
Sbjct: 155 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVI--LEAACRGGGFRS 212

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A +VL+ +   G   D    N+++  +C +G +  A+ LL ++   GCEPDV++YN +L+
Sbjct: 213 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLK 272

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +    ++       ++ +R  CPP ++T+  LI  +C+     R  EVL  M   GC+P
Sbjct: 273 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTP 332

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW------- 343
           DI  Y ++++  CK+G  + A  ++N + S G++PN + YNTLL  L S   W       
Sbjct: 333 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 392

Query: 344 ----------------------------DAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
                                       D V ++L+ M E    P V TY  +ING CK 
Sbjct: 393 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKE 452

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           GL+D A+     M +  C+P+ ++Y  VL  LC      +A  L+  +    C    IT+
Sbjct: 453 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 512

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           NTLI+ L KKG +E+A+ L  QM+ NG SPD I++ T+I G  +A + +EA++LL  +  
Sbjct: 513 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 572

Query: 496 RG---------------------------------NKMRNSA--YRLVIHGLCKSKKVDM 520
           +G                                   +R+ A  Y  VI  LCK  + + 
Sbjct: 573 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 632

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           AI+ L  M+SS   P+++ ++ +++ +A +G  +EA ++  +L       K
Sbjct: 633 AIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRK 683



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 238/480 (49%), Gaps = 42/480 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G+L  A +L    A     P+ +    ++R L    RI  A  VL  M  
Sbjct: 131 NAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 187

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P    Y++++   C+ G  RSA+ +L+++   GC  DV   N +L  + D G   +
Sbjct: 188 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE 247

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVC--KQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           A+   +D    GC P +++Y  +++ +C  K+ G  +  E++++M    C P+IVT+N+L
Sbjct: 248 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ--ELMEEMVRMACPPNIVTFNTL 305

Query: 299 VNF-----------------------------------SCKQGKYDDAVLVINNLLSRGM 323
           +++                                    CK+G  + A  ++N + S G+
Sbjct: 306 ISYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGL 365

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           +PN + YNTLL  L S   W+  +++L  M +        T+NIL++  C+ GLVDR I 
Sbjct: 366 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 425

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              QM+   C PD++TY TV+   CKEG+++EA+ LL  +    C P  I+Y  ++ GL 
Sbjct: 426 LLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 485

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
                  A  L  QM++ G   + IT  TLI   C+   VE+A++LLK++   G      
Sbjct: 486 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 545

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +Y  VI GL K+ K D A+++L +M++    P+  ++S+I   ++ +G   +  +++  +
Sbjct: 546 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 605



 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 206/410 (50%), Gaps = 38/410 (9%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           YN MV G C+ GQ+ SA  L   + V    P+  TY  ++R +   G+   A+    +  
Sbjct: 130 YNAMVAGYCRAGQLESARRLAAAVPVP---PNAYTYFPVVRALCARGRIADALAVLDEMP 186

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R+GC P    Y +++E  C+  G   A+ VL+D+   GC+ D+   N ++N  C QG  D
Sbjct: 187 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 246

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A+ ++ +L S G EP+ ++YN +L  L     W  V ++++ M   +  P + T+N LI
Sbjct: 247 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 306

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           + LC+ GL +R      QMV   C PDI  Y T++  +CKEG L  A ++L+ +      
Sbjct: 307 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 366

Query: 430 PCLITYNTLIDGL-----------------------------------AKKGCMEKAMVL 454
           P ++ YNTL+ GL                                    + G +++ + L
Sbjct: 367 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 426

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             QM+E+G  PD IT+ T+I GFC+   ++EAV LLK +   G K    +Y +V+ GLC 
Sbjct: 427 LEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 486

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +++   A  ++  MI      +   F+T++  +   G+ E+A +L ++++
Sbjct: 487 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 536


>gi|297741319|emb|CBI32450.3| unnamed protein product [Vitis vinifera]
          Length = 851

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 137/461 (29%), Positives = 229/461 (49%), Gaps = 15/461 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++ FCS G+L         M R   +P+      LI    ++ RI++A  +L+ M
Sbjct: 12  TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 71

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ I+YN+++ GLC+ G ++ A  +L+EM   G  PD +TYNT+L      G F
Sbjct: 72  SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 131

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA+    + +R G  P ++TYT LI  +CK   + RA+E  D M I G  P+  TY +L
Sbjct: 132 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 191

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   +QG  ++A  ++N +   G  P+ +TYN  +H        +    ++  M E   
Sbjct: 192 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 251

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V +Y+ +I+G C+ G +DRA     +MV K   PD VTY++++  LC+   L EA  
Sbjct: 252 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACD 311

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P   TY TLI+    +G + KA+ L+ +M+  G  PD +T+  LI G  
Sbjct: 312 LSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLN 371

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH---------------GLCKSKKVDMAIQ 523
           +  +  EA  LL ++    +   +  Y  +I                G C    +  A +
Sbjct: 372 KQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADR 431

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           V E M+   +KP + V++ I+      G   +A+ L++++I
Sbjct: 432 VFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMI 472



 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 207/387 (53%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+ S   P+  TYN+++ G C  G+++  +    EM  +GC P+V+TYNT++      G+
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A G  K    KG  P LI+Y ++I  +C++  +  A E+L++M  +G +PD VTYN+
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK+G +  A+++   ++  G+ P+ +TY  L++S+      +   +  D M    
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TY  LI+G  + GL++ A    N+M      P +VTYN  +   C    + EAL
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            ++  +     +P +++Y+T+I G  +KG +++A  +  +M+E G+SPD +T+ +LI G 
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C   ++ EA DL +E+   G       Y  +I+  C    ++ A+ + + MI   + PD 
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
             +S ++  +     T EA +L  KLI
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLI 387



 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 127/438 (28%), Positives = 223/438 (50%), Gaps = 15/438 (3%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M R    P+ +    LIRG   +  ++K       M  +G +P+ +TYN ++   CK G+
Sbjct: 1   MIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGR 60

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           I  A  LL  MS  G +P++I+YN I+  +   G  K+A    ++   KG  P  +TY  
Sbjct: 61  IDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNT 120

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L+   CK+    +A+ +  +M   G SP +VTY +L+N  CK    + A+   + +  RG
Sbjct: 121 LLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRG 180

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + PN  TY TL+     +G  +   +IL+ M E+  SP+V TYN  I+G C    ++ A+
Sbjct: 181 LRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEAL 240

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
               +MV K   PD+V+Y+T++   C++G L+ A Q+   +     SP  +TY++LI GL
Sbjct: 241 GVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGL 300

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            +   + +A  L  +M++ G+ PD+ T+ TLI  +C    + +A+ L  E+  +G     
Sbjct: 301 CEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDA 360

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD------------- 549
             Y ++I+GL K  +   A ++L  +I     P D  + T+++  ++             
Sbjct: 361 VTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGF 420

Query: 550 --DGMTEEAYKLWQKLIE 565
              G+  EA ++++ ++E
Sbjct: 421 CMKGLMHEADRVFESMVE 438



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 183/390 (46%), Gaps = 15/390 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T N +L  +C  G    A  +   M R    P       LI  + +   + +A +  
Sbjct: 114 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 173

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G  P+  TY  ++ G  ++G +  A  +L+EM+ SG  P V+TYN  +      
Sbjct: 174 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 233

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + ++A+G  ++ + KG  P +++Y+ +I   C++  + RA ++  +M  +G SPD VTY
Sbjct: 234 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 293

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +SL+   C+  +  +A  +   +L  G+ P+  TY TL+++    G  +    + D M  
Sbjct: 294 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 353

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT------------- 402
               P   TY++LINGL K      A     +++ +   P  VTY+T             
Sbjct: 354 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 413

Query: 403 --VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             ++   C +G+++EA ++   +   +  P    YN +I G  + G + KA  LY +M+ 
Sbjct: 414 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 473

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLL 490
           +G  P  +T  TLI    +    EE  +++
Sbjct: 474 SGFVPHTVTVITLIKALFKEGMNEEMSEVI 503



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 177/395 (44%), Gaps = 31/395 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++ + C    L  A +  D M  R   P+      LI G  R   + +A ++L  M
Sbjct: 152 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 211

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG  P  +TYN  + G C   ++  A+ ++ EM   G  PDV++Y+TI+      G+ 
Sbjct: 212 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 271

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A    ++ + KG  P  +TY+ LI+ +C+   +  A ++  +M   G  PD  TY +L
Sbjct: 272 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 331

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C +G  + A+ + + ++ +G  P+++TY+ L++ L  +       ++L  +     
Sbjct: 332 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 391

Query: 359 SPTVFTYNILIN---------------GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
            P+  TY+ LI                G C  GL+  A   F  MV +N +P    YN +
Sbjct: 392 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 451

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +   C+ G L +A  L   +  S   P  +T  TLI  L K+G  E+   + G  + +  
Sbjct: 452 IHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRS-- 509

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
                         CR ++ E A  L++   K GN
Sbjct: 510 --------------CRLNEAELAKVLVEINHKEGN 530



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 20/238 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T + ++Q  C   +LT+A  L   M      PD      LI        + KA 
Sbjct: 286 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 345

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M+  G +PD +TY++++ GL K+ + R A  LL ++      P  +TY+T++   
Sbjct: 346 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 405

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N +FK  +                    LI+  C +  +  A  V + M      P  
Sbjct: 406 -SNIEFKSVVA-------------------LIKGFCMKGLMHEADRVFESMVERNHKPGE 445

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
             YN +++  C+ G    A  +   ++  G  P+++T  TL+ +L   G  + + +++
Sbjct: 446 AVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 503


>gi|147768816|emb|CAN62673.1| hypothetical protein VITISV_031897 [Vitis vinifera]
          Length = 653

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 144/489 (29%), Positives = 242/489 (49%), Gaps = 6/489 (1%)

Query: 95  TITKKSHDPSLPS----SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           +I K  H  +L S     D   +  D  T   ++ + C   ++  A   +  + +    P
Sbjct: 79  SIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQP 138

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D      LIRGL    +I +A  +   M+  G  P+ +TY  ++ GLCK G   +AI LL
Sbjct: 139 DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLL 198

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
             M    C+P+V+ ++T++ ++  + +  +A   + + + KG  P ++TY  LI  +CK 
Sbjct: 199 RSMEQGNCQPNVVVFSTLIDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKL 258

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           C       ++++M      PD+ T N++V+  CK+G   +A  V++ ++ RG+EPN +TY
Sbjct: 259 CEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTY 318

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N L+     R   D   K+ D M        V +YN LING CK   VD+A+  F +M  
Sbjct: 319 NALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSR 378

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +   P+ VTYNT++  LC  G L +A+ L H +      P L+TY TL D L K   ++K
Sbjct: 379 QELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDK 438

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           AM L   +  +   PD   + T++ G CRA ++E+A DL   +  +G +     Y ++IH
Sbjct: 439 AMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIH 498

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE--WKV 568
           GLCK   +  A ++   M  +   P+D  ++ I +    +       +L ++++   + V
Sbjct: 499 GLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSV 558

Query: 569 FEKGTTLLA 577
               TTLL 
Sbjct: 559 DVSTTTLLV 567



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 113/436 (25%), Positives = 213/436 (48%), Gaps = 35/436 (8%)

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
           +  + +++A      M+     P T+ +N ++  + K     + ++L  +M   G  PDV
Sbjct: 46  LHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDV 105

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            T   ++ ++    +   A       L+ G  P   T+T LI  +C +  I  A+ + D 
Sbjct: 106 YTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 165

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQG-----------------------------------K 307
           M  EG  P++VTY +L+N  CK G                                   +
Sbjct: 166 MIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTLIDSLCKDRQ 225

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
             +A  + + ++++G+ PN +TYN+L+H L     W  V  +++ M ++   P VFT N 
Sbjct: 226 VTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNT 285

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +++ LCK G+V  A +  + M+ +  +P++VTYN ++   C    ++ A+++   +    
Sbjct: 286 VVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKD 345

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C   +I+YNTLI+G  K   ++KAM L+ +M    ++P+ +T+ TLI G C   ++++A+
Sbjct: 346 CVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAI 405

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L  E+  RG       YR +   LCK++ +D A+ +L+ +  S + PD  +++TI+  +
Sbjct: 406 SLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGM 465

Query: 548 ADDGMTEEAYKLWQKL 563
              G  E+A  L+  L
Sbjct: 466 CRAGELEDARDLFSNL 481



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 89/340 (26%), Positives = 158/340 (46%)

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           ++NT            +A+  +   L K  PP  + +  L+  + K    +  + +   M
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G  PD+ T   ++N  C   + D A   +  +L  G +P++ T+ TL+  L   G  
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
                + D M      P V TY  LINGLCK G    AI     M   NCQP++V ++T+
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + +LCK+  + EA  +   +     SP ++TYN+LI GL K    +    L  +M+++ I
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKI 276

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD  T  T++   C+   V EA D++  +  RG +     Y  ++ G C   +VD+A++
Sbjct: 277 MPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVK 336

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           V + M+      +   ++T++         ++A  L++++
Sbjct: 337 VFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEM 376



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/201 (25%), Positives = 97/201 (48%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           ++N   +    +  +D A+++FN+M+ K   P  V +N +L ++ K    +  L L   +
Sbjct: 37  SHNTFHSKPLHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQM 96

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
           +     P + T   +I+ L     ++ A     ++++ G  PD  T  TLI G C   ++
Sbjct: 97  DSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKI 156

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            EA+ L  ++   G +     Y  +I+GLCK      AI++L  M     +P+  VFST+
Sbjct: 157 GEALHLFDKMIGEGFQPNVVTYGTLINGLCKVGNTSAAIRLLRSMEQGNCQPNVVVFSTL 216

Query: 544 VKKVADDGMTEEAYKLWQKLI 564
           +  +  D    EA+ ++ ++I
Sbjct: 217 IDSLCKDRQVTEAFNIFSEMI 237


>gi|15242446|ref|NP_198787.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170916|sp|Q9FIX3.1|PP407_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g39710; AltName: Full=Protein EMBRYO DEFECTIVE 2745
 gi|10177971|dbj|BAB11377.1| unnamed protein product [Arabidopsis thaliana]
 gi|332007083|gb|AED94466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 747

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 240/474 (50%), Gaps = 15/474 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++ FC  G +  A  L D M  +  +P+      LI G  ++ +I+   K+L+ M
Sbjct: 207 TYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDGFKLLRSM 266

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G  P+ I+YN+++ GLC+ G+++    +L EM+  G   D +TYNT+++     G F
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKGYCKEGNF 326

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA+    + LR G  P +ITYT LI  +CK   + RA+E LD M + G  P+  TY +L
Sbjct: 327 HQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPNERTYTTL 386

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+   ++G  ++A  V+  +   G  P+ +TYN L++     G  +    +L+ M E   
Sbjct: 387 VDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLEDMKEKGL 446

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP V +Y+ +++G C+   VD A+    +MV K  +PD +TY++++   C++    EA  
Sbjct: 447 SPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQRRTKEACD 506

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P   TY  LI+    +G +EKA+ L+ +M+E G+ PD +T+  LI G  
Sbjct: 507 LYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVLPDVVTYSVLINGLN 566

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH---------------GLCKSKKVDMAIQ 523
           +  +  EA  LL ++    +   +  Y  +I                G C    +  A Q
Sbjct: 567 KQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           V E M+   +KPD T ++ ++      G   +AY L++++++        T++A
Sbjct: 627 VFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIA 680



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/413 (28%), Positives = 219/413 (53%), Gaps = 1/413 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK-RGQIRSAIALLDEMSVS 216
           +++   R+  I+KA  ++ +    G +P  ++YN ++    + +  I  A  +  EM  S
Sbjct: 140 VVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLES 199

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
              P+V TYN ++R     G    A+  +     KGC P ++TY  LI+  CK   I   
Sbjct: 200 QVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            ++L  MA++G  P++++YN ++N  C++G+  +   V+  +  RG   + +TYNTL+  
Sbjct: 260 FKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTLIKG 319

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               G +     +   M     +P+V TY  LI+ +CK G ++RA+   +QM  +   P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGLCPN 379

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             TY T++    ++G +NEA ++L  +N +  SP ++TYN LI+G    G ME A+ +  
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIAVLE 439

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M E G+SPD +++ T++ GFCR+  V+EA+ + +E+ ++G K     Y  +I G C+ +
Sbjct: 440 DMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQGFCEQR 499

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           +   A  + E M+     PD+  ++ ++     +G  E+A +L  +++E  V 
Sbjct: 500 RTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVEKGVL 552



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 122/403 (30%), Positives = 205/403 (50%), Gaps = 1/403 (0%)

Query: 163 IRIDR-IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
           IR  R I  A  V + M+ S   P+  TYN+++ G C  G I  A+ L D+M   GC P+
Sbjct: 180 IRSKRNISFAENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPN 239

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           V+TYNT++       K        +    KG  P LI+Y ++I  +C++  +     VL 
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLT 299

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +M   G S D VTYN+L+   CK+G +  A+++   +L  G+ P+ ITY +L+HS+   G
Sbjct: 300 EMNRRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAG 359

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             +   + LD M      P   TY  L++G  + G ++ A     +M      P +VTYN
Sbjct: 360 NMNRAMEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYN 419

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            ++   C  G + +A+ +L  +     SP +++Y+T++ G  +   +++A+ +  +M+E 
Sbjct: 420 ALINGHCVTGKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEK 479

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           GI PD IT+ +LI GFC   + +EA DL +E+ + G       Y  +I+  C    ++ A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKA 539

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +Q+   M+     PD   +S ++  +     T EA +L  KL 
Sbjct: 540 LQLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLF 582



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 115/379 (30%), Positives = 204/379 (53%), Gaps = 7/379 (1%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF----W 245
           ++++V    +   I  A++++      G  P V++YN +L       + K+ I F    +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATI---RSKRNISFAENVF 193

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           K+ L     P + TY ILI   C    I  A+ + D M  +GC P++VTYN+L++  CK 
Sbjct: 194 KEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKL 253

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
            K DD   ++ ++  +G+EPN I+YN +++ L   G    V  +L  MN   +S    TY
Sbjct: 254 RKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTY 313

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N LI G CK G   +A+    +M+     P ++TY +++ ++CK G +N A++ L  +  
Sbjct: 314 NTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRV 373

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P   TY TL+DG ++KG M +A  +  +M +NG SP  +T+  LI G C   ++E+
Sbjct: 374 RGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMED 433

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+ +L+++ ++G      +Y  V+ G C+S  VD A++V   M+    KPD   +S++++
Sbjct: 434 AIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITYSSLIQ 493

Query: 546 KVADDGMTEEAYKLWQKLI 564
              +   T+EA  L+++++
Sbjct: 494 GFCEQRRTKEACDLYEEML 512



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 108/436 (24%), Positives = 199/436 (45%), Gaps = 15/436 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T N +++ +C  G    A  +   M R    P      +LI  + +   + +A + L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFL 368

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G  P+  TY  +V G  ++G +  A  +L EM+ +G  P V+TYN ++      
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVT 428

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK + AI   +D   KG  P +++Y+ ++   C+   +  A+ V  +M  +G  PD +TY
Sbjct: 429 GKMEDAIAVLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVEKGIKPDTITY 488

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +SL+   C+Q +  +A  +   +L  G+ P+  TY  L+++    G  +   ++ + M E
Sbjct: 489 SSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKALQLHNEMVE 548

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT------------- 402
               P V TY++LINGL K      A     ++  +   P  VTY+T             
Sbjct: 549 KGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSV 608

Query: 403 --VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             ++   C +GM+ EA Q+   + G +  P    YN +I G  + G + KA  LY +M++
Sbjct: 609 VSLIKGFCMKGMMTEADQVFESMLGKNHKPDGTAYNIMIHGHCRAGDIRKAYTLYKEMVK 668

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           +G     +T   L+    +  +V E   ++  + +          ++++    +   +D+
Sbjct: 669 SGFLLHTVTVIALVKALHKEGKVNELNSVIVHVLRSCELSEAEQAKVLVEINHREGNMDV 728

Query: 521 AIQVLELMISSRYKPD 536
            + VL  M    + P+
Sbjct: 729 VLDVLAEMAKDGFLPN 744



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 89/342 (26%), Positives = 160/342 (46%), Gaps = 36/342 (10%)

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK-YDDAVLVINNL 318
           + ++++   +   I +A+ ++      G  P +++YN++++ + +  +    A  V   +
Sbjct: 137 FDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L   + PN  TYN L+      G  D    + D M      P V TYN LI+G CK   +
Sbjct: 197 LESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDGYCKLRKI 256

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D        M  K  +P++++YN V+  LC+EG + E   +L  +N    S   +TYNTL
Sbjct: 257 DDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKEVSFVLTEMNRRGYSLDEVTYNTL 316

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG- 497
           I G  K+G   +A+V++ +M+ +G++P  IT+ +LI   C+A  +  A++ L ++  RG 
Sbjct: 317 IKGYCKEGNFHQALVMHAEMLRHGLTPSVITYTSLIHSMCKAGNMNRAMEFLDQMRVRGL 376

Query: 498 ----------------NKMRNSAYRL------------------VIHGLCKSKKVDMAIQ 523
                               N AYR+                  +I+G C + K++ AI 
Sbjct: 377 CPNERTYTTLVDGFSQKGYMNEAYRVLREMNDNGFSPSVVTYNALINGHCVTGKMEDAIA 436

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           VLE M      PD   +ST++         +EA ++ ++++E
Sbjct: 437 VLEDMKEKGLSPDVVSYSTVLSGFCRSYDVDEALRVKREMVE 478



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 106/238 (44%), Gaps = 20/238 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T + ++Q FC + +  +A  L + M R    PD      LI        +EKA 
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLYEEMLRVGLPPDEFTYTALINAYCMEGDLEKAL 540

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   MV  G +PD +TY++++ GL K+ + R A  LL ++      P  +TY+T++   
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQSRTREAKRLLLKLFYEESVPSDVTYHTLIENC 600

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N +FK  +                    LI+  C +  +  A +V + M  +   PD 
Sbjct: 601 -SNIEFKSVVS-------------------LIKGFCMKGMMTEADQVFESMLGKNHKPDG 640

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
             YN +++  C+ G    A  +   ++  G   +++T   L+ +L   G  + ++ ++
Sbjct: 641 TAYNIMIHGHCRAGDIRKAYTLYKEMVKSGFLLHTVTVIALVKALHKEGKVNELNSVI 698



 Score = 69.7 bits (169), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 38/164 (23%), Positives = 84/164 (51%), Gaps = 1/164 (0%)

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG-LAKKGCMEKA 451
           C      ++ V+ +  +  ++++AL ++HL       P +++YN ++D  +  K  +  A
Sbjct: 130 CYSTSSVFDLVVKSYSRLSLIDKALSIVHLAQAHGFMPGVLSYNAVLDATIRSKRNISFA 189

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             ++ +M+E+ +SP+  T+  LI GFC A  ++ A+ L  ++  +G       Y  +I G
Sbjct: 190 ENVFKEMLESQVSPNVFTYNILIRGFCFAGNIDVALTLFDKMETKGCLPNVVTYNTLIDG 249

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            CK +K+D   ++L  M     +P+   ++ ++  +  +G  +E
Sbjct: 250 YCKLRKIDDGFKLLRSMALKGLEPNLISYNVVINGLCREGRMKE 293


>gi|356525788|ref|XP_003531505.1| PREDICTED: pentatricopeptide repeat-containing protein At1g79080,
           chloroplastic-like [Glycine max]
          Length = 572

 Score =  237 bits (604), Expect = 1e-59,   Method: Compositional matrix adjust.
 Identities = 133/477 (27%), Positives = 248/477 (51%), Gaps = 36/477 (7%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           ++ DA   ++ +  + Q P+ +    L+  L + ++  KA +V+++MV SG +PD  +Y 
Sbjct: 79  RIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAASYT 138

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            +V  LCKRG +  AI L+++M   G   + +TYNT+++ +  +G   Q++       +K
Sbjct: 139 HLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRLTKK 198

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P   TY+ L+E   K+ G+  A+++LDD+  +G  P++V+YN L+   CK+G+ ++A
Sbjct: 199 GLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRTEEA 258

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI-- 369
           + +   L  +G  P+ +++N LL SL   G W+  +++L  M++    P+V TYNILI  
Sbjct: 259 IKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNILITS 318

Query: 370 ---NG------------------------------LCKYGLVDRAINSFNQMVSKNCQPD 396
              NG                              LCK G VD  +   +QM+ + C P+
Sbjct: 319 LSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRCHPN 378

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             TY+ +   L ++G + EA  ++  L      P    Y  LI  L +KG    A  +  
Sbjct: 379 EGTYSAI-SMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQMLY 437

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M + G +PD  T+ +LI G CR   ++EA+ + + + +  ++     Y  +I G CK++
Sbjct: 438 EMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQ 497

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
           + D++I++  +M++    P++  ++ +V+ +A +  T+ A  L ++L   KV  + T
Sbjct: 498 RTDLSIEIFLMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKELYLKKVLSQST 554



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 193/375 (51%), Gaps = 1/375 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C  G L  + +L+D + ++  IP+      L+    +   +++A K+L  +
Sbjct: 171 TYNTLVKGLCMHGNLNQSLQLLDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDI 230

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  GG P+ ++YN+++ GLCK G+   AI L  E+ V G  P V+++N +LR++   G++
Sbjct: 231 IAKGGEPNLVSYNVLLTGLCKEGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRW 290

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     +  ++  PP ++TY ILI  +       +A +VLD+M   G      +YN +
Sbjct: 291 EEANELLAEMDKEDQPPSVVTYNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPI 350

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK+GK D  +  ++ ++ R   PN  TY+  +  L  +G       I+  +    +
Sbjct: 351 IARLCKEGKVDLVLKCLDQMIHRRCHPNEGTYSA-ISMLSEQGKVQEAFFIIQSLGSKQN 409

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    Y  LI  LC+ G    A     +M      PD  TY++++  +C+EGML+EAL+
Sbjct: 410 FPMHDFYKNLIASLCRKGNTYPAFQMLYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALK 469

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +  +L  +   P +  YN LI G  K    + ++ ++  M+  G  P++ T+  L+ G  
Sbjct: 470 IFRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIFLMMVNKGCVPNENTYTILVEGLA 529

Query: 479 RADQVEEAVDLLKEI 493
             ++ + A DL+KE+
Sbjct: 530 FEEETDIAADLMKEL 544



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/401 (26%), Positives = 190/401 (47%), Gaps = 34/401 (8%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K  +I  A   L+ +   G +P+V     +L  +    K ++A+   +  +  G  P   
Sbjct: 76  KELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGIIPDAA 135

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           +YT L+  +CK+  +  AI++++ M   G   + VTYN+LV   C  G  + ++ +++ L
Sbjct: 136 SYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQLLDRL 195

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             +G+ PN+ TY+ LL +       D   K+LD +      P + +YN+L+ GLCK G  
Sbjct: 196 TKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCKEGRT 255

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + AI  F ++  K   P +V++N +L +LC EG   EA +LL  ++     P ++TYN L
Sbjct: 256 EEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVTYNIL 315

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA----------DQ------ 482
           I  L+  G  E+A  +  +M  +G      ++  +I   C+           DQ      
Sbjct: 316 ITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMIHRRC 375

Query: 483 ------------------VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
                             V+EA  +++ +G + N   +  Y+ +I  LC+      A Q+
Sbjct: 376 HPNEGTYSAISMLSEQGKVQEAFFIIQSLGSKQNFPMHDFYKNLIASLCRKGNTYPAFQM 435

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           L  M    + PD   +S++++ +  +GM +EA K+++ L E
Sbjct: 436 LYEMTKYGFTPDSYTYSSLIRGMCREGMLDEALKIFRILEE 476



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 88/334 (26%), Positives = 155/334 (46%), Gaps = 36/334 (10%)

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           +Q  K+  I  A   L+ +  +G  P++     L+   CK  K   AV V+  ++  G+ 
Sbjct: 72  DQKGKELRIYDAFLHLEYLVGKGQKPEVNQATQLLYDLCKFNKARKAVRVMEMMVGSGII 131

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG-------- 376
           P++ +Y  L++ L  RG      ++++ M          TYN L+ GLC +G        
Sbjct: 132 PDAASYTHLVNFLCKRGNVGYAIQLVEKMEGHGFPTNTVTYNTLVKGLCMHGNLNQSLQL 191

Query: 377 ---------------------------LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
                                       VD A+   + +++K  +P++V+YN +L  LCK
Sbjct: 192 LDRLTKKGLIPNAFTYSFLLEAAYKERGVDEAMKLLDDIIAKGGEPNLVSYNVLLTGLCK 251

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           EG   EA++L   L     SP ++++N L+  L  +G  E+A  L  +M +    P  +T
Sbjct: 252 EGRTEEAIKLFQELPVKGFSPSVVSFNILLRSLCYEGRWEEANELLAEMDKEDQPPSVVT 311

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  LI       + E+A  +L E+ + G K   ++Y  +I  LCK  KVD+ ++ L+ MI
Sbjct: 312 YNILITSLSLNGRTEQAFKVLDEMTRSGFKASATSYNPIIARLCKEGKVDLVLKCLDQMI 371

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             R  P++  +S I   +++ G  +EA+ + Q L
Sbjct: 372 HRRCHPNEGTYSAI-SMLSEQGKVQEAFFIIQSL 404



 Score = 46.6 bits (109), Expect = 0.040,   Method: Compositional matrix adjust.
 Identities = 30/115 (26%), Positives = 55/115 (47%), Gaps = 4/115 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + +++  C  G L +A K+  I+   +  PD      LI G  +  R + + ++ 
Sbjct: 447 DSYTYSSLIRGMCREGMLDEALKIFRILEENDHRPDIDNYNALILGFCKAQRTDLSIEIF 506

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
            +MV  G VP+  TY ++V GL    +   A  L+ E+ +      V++ +T+ R
Sbjct: 507 LMMVNKGCVPNENTYTILVEGLAFEEETDIAADLMKELYLK----KVLSQSTVER 557


>gi|115459104|ref|NP_001053152.1| Os04g0488500 [Oryza sativa Japonica Group]
 gi|113564723|dbj|BAF15066.1| Os04g0488500 [Oryza sativa Japonica Group]
          Length = 801

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 146/455 (32%), Positives = 228/455 (50%), Gaps = 18/455 (3%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  GK   A +LI  M R+  +PD      +I  L    ++EKA  + Q M M G  PD
Sbjct: 263 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 322

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY +++   CK G I  A  L +EM   GC P V+TY  ++       +  QA   + 
Sbjct: 323 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 382

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL----------DDMAIEGC------SP 290
             +  GC P  +TY  L++ +CK   I++A EV           D      C      +P
Sbjct: 383 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 442

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           ++VTY +LV+  CK  K D A  +++ +LS G EPN I Y+ L+      G  D+  ++ 
Sbjct: 443 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 502

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M +  + P+V TY  LI+ + K G +D A+   +QM+  +C P++VTY  ++  LC+ 
Sbjct: 503 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 562

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G   +AL+LL L+    CSP ++TY  LIDGL K G ++ ++ L+ QM   G SP+ +T+
Sbjct: 563 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTY 622

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           R LI   C A  +++A  LL E+ +         YR  I G   SK    ++ +LE M S
Sbjct: 623 RVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGF--SKSFIASLGILEEMES 680

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               P   V+  ++   +  G  E A +L ++++E
Sbjct: 681 YGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMME 715



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 219/472 (46%), Gaps = 25/472 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T        C  G+  DA   +D++ R +   D   C ++I GL+     ++A   L
Sbjct: 74  DRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFL 130

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +  +P+ +TY  ++ G  K+ Q+     +++ M   GC P+   +N+++ +  + 
Sbjct: 131 HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNE 190

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR------AIEVLDDMAIEGCS 289
             +  A          GCPP  + Y I I  +C Q  +        A ++  +M    C 
Sbjct: 191 KDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCV 250

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            + V   +     C  GK+D A  +I  ++ +G  P++ TY+ ++  L      +    +
Sbjct: 251 LNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLL 310

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M     +P V+TY ILI+  CK GL+++A   F +M S  C P +VTY  ++ A  K
Sbjct: 311 FQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLK 370

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM---------- 459
              + +A  + H +  + C P  +TY  L+DGL K G + KA  +Y +++          
Sbjct: 371 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 430

Query: 460 ------ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
                  + ++P+ +T+  L+ G C+A +V+ A +LL  +   G +  +  Y  +I G C
Sbjct: 431 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 490

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K+ K+D A +V   M    Y P    +++++ ++  DG  + A K+  ++++
Sbjct: 491 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 542



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 140/463 (30%), Positives = 208/463 (44%), Gaps = 51/463 (11%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   ++ +FC  G +  A  L + M      P       LI   ++  ++ +A+
Sbjct: 319 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 378

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG----------CE--- 219
            +   MV +G  P+ +TY  +V GLCK G I  A  +  ++  +           CE   
Sbjct: 379 DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRH 438

Query: 220 ---PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
              P+V+TY  ++  +    K   A       L  GC P  I Y  LI+  CK   I  A
Sbjct: 439 TLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSA 498

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            EV   M   G  P + TY SL++   K G+ D A+ V++ +L     PN +TY  ++  
Sbjct: 499 QEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDG 558

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G  +   K+L +M E   SP V TY  LI+GL K G +D +++ F QM  K C P+
Sbjct: 559 LCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPN 618

Query: 397 IVTYNTVLGALCKEGMLNEALQLL---------HLLNGSSCS------------------ 429
            VTY  ++  LC  G+L++A  LL           L G  C+                  
Sbjct: 619 YVTYRVLINHLCAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGILEEM 678

Query: 430 ------PCLITYNTLIDGLAKKGCMEKAMVLYGQMME--NGISPDDITHRTLIWGFCRAD 481
                 P    Y  LID  +K G +E AM L+ +MME  + +  D+  + +LI   C A 
Sbjct: 679 ESYGTVPIAPVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLAS 738

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           QVEEA  L  E+ +RG     S +  +I GL + KK D A+Q+
Sbjct: 739 QVEEAFRLYSEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQL 781



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/513 (23%), Positives = 224/513 (43%), Gaps = 59/513 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +L  F  + +L    ++I++M      P+     +L+           A K+L  M
Sbjct: 144 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 203

Query: 179 VMSGGVPDTITYNMMVGGLCKR-------------------------------------- 200
              G  P  + YN+ +G +C +                                      
Sbjct: 204 TTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 263

Query: 201 ---GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
              G+   A  L+ EM   G  PD  TY+ ++  +    K ++A   +++    G  P +
Sbjct: 264 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 323

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            TYTILI+  CK   I +A  + ++M   GCSP +VTY +L++   K  +   A  + + 
Sbjct: 324 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 383

Query: 318 LLSRGMEPNSITYNTLLHSLGSR--------------GCWDAVDKILDIMNEASH--SPT 361
           ++  G  PN +TY  L+  L                 G  D+ D       E  H  +P 
Sbjct: 384 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 443

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TY  L++GLCK   VD A    + M+S  C+P+ + Y+ ++   CK G ++ A ++  
Sbjct: 444 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 503

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +      P + TY +LID + K G ++ AM +  QM+++  +P+ +T+  +I G CR  
Sbjct: 504 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 563

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           + E+A+ LL  + ++G       Y  +I GL K+ K+D+++ +   M      P+   + 
Sbjct: 564 ESEKALKLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYR 623

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE--WKVFEKG 572
            ++  +   G+ ++A  L  ++ +  W  + +G
Sbjct: 624 VLINHLCAAGLLDKARLLLGEMKQTYWPKYLQG 656



 Score =  146 bits (369), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/342 (28%), Positives = 163/342 (47%), Gaps = 4/342 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+ GL +  +++ A ++L  M+ SG  P+ I Y+ ++ G CK G+I SA  +  +M+  G
Sbjct: 450 LVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCG 509

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P V TY +++  MF +G+   A+      L+  C P ++TYT +I+ +C+     +A+
Sbjct: 510 YLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKAL 569

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++L  M  +GCSP++VTY +L++   K GK D ++ +   +  +G  PN +TY  L++ L
Sbjct: 570 KLLSLMEEKGCSPNVVTYTALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHL 629

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            + G  D    +L  M +      +  Y   I G  K  +    I    +M S    P  
Sbjct: 630 CAAGLLDKARLLLGEMKQTYWPKYLQGYRCAIQGFSKSFIASLGI--LEEMESYGTVPIA 687

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLN--GSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
             Y  ++    K G L  A++L   +    SS       Y +LI  L     +E+A  LY
Sbjct: 688 PVYGMLIDCFSKAGRLEIAMELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLY 747

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
            +M   G  P+      LI G     + +EA+ L   I   G
Sbjct: 748 SEMTRRGFVPELSVFVCLIKGLVEVKKWDEALQLCYGICHEG 789



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 102/389 (26%), Positives = 176/389 (45%), Gaps = 9/389 (2%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P  +TYN +V  L   GQ+     +  EMS SG   D  T       +   G++  A
Sbjct: 35  GYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADA 94

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   +   R+      +  T +I  + +      A+  L  M    C P++VTY +L++ 
Sbjct: 95  LDMIE---REDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSG 151

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             K+ +      +IN +++ G  PN   +N+L+HS  +   +    K+L+ M      P 
Sbjct: 152 FLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPG 211

Query: 362 VFTYNILINGLCKY------GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              YNI I  +C         L+D A   + +M++ NC  + V        LC  G  ++
Sbjct: 212 YVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDK 271

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A QL+  +      P   TY+ +I  L     +EKA +L+ +M   G++PD  T+  LI 
Sbjct: 272 AFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILID 331

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            FC+A  +E+A  L +E+   G       Y  +IH   K+K+V  A  +   M+ +  +P
Sbjct: 332 SFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRP 391

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +D  +  +V  +   G   +A++++ KLI
Sbjct: 392 NDVTYGALVDGLCKAGNISKAFEVYAKLI 420



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 169/389 (43%), Gaps = 9/389 (2%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L++ L    +++   +V + M  SG   D  T       LCK G+   A+ +++      
Sbjct: 46  LVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDF-- 103

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            + D +    ++  + +   F +A+ F        C P ++TY  L+    K+  +    
Sbjct: 104 -KLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCK 162

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS- 336
            +++ M  EGC+P+   +NSLV+  C +  Y  A  ++N + + G  P  + YN  + S 
Sbjct: 163 RIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 222

Query: 337 -----LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
                L S    D  +KI   M  A+              LC  G  D+A     +M+ K
Sbjct: 223 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 282

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              PD  TY+ V+  LC    + +A  L   +     +P + TY  LID   K G +E+A
Sbjct: 283 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 342

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             L+ +M   G SP  +T+  LI  + +A QV +A D+   +   G +  +  Y  ++ G
Sbjct: 343 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 402

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           LCK+  +  A +V   +I +    D   +
Sbjct: 403 LCKAGNISKAFEVYAKLIGTSDSADSDFY 431



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 99/378 (26%), Positives = 168/378 (44%), Gaps = 6/378 (1%)

Query: 82  SHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           S    V  KL G + +  S D   P  D   +  +  T   ++   C   K+  A +L+D
Sbjct: 410 SKAFEVYAKLIGTSDSADS-DFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 468

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            M      P+      LI G  +  +I+ A +V   M   G +P   TY  ++  + K G
Sbjct: 469 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 528

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++  A+ +L +M    C P+V+TY  ++  +   G+ ++A+        KGC P ++TYT
Sbjct: 529 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 588

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            LI+ + K   I  ++++   M+ +GCSP+ VTY  L+N  C  G  D A L++  +   
Sbjct: 589 ALIDGLGKAGKIDLSLDLFTQMSRKGCSPNYVTYRVLINHLCAAGLLDKARLLLGEMKQT 648

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
                   Y   +   G    + A   IL+ M      P    Y +LI+   K G ++ A
Sbjct: 649 YWPKYLQGYRCAIQ--GFSKSFIASLGILEEMESYGTVPIAPVYGMLIDCFSKAGRLEIA 706

Query: 382 INSFNQM--VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +    +M  V  + + D   Y +++ ALC    + EA +L   +      P L  +  LI
Sbjct: 707 MELHKEMMEVPSSVKTDNDMYASLIQALCLASQVEEAFRLYSEMTRRGFVPELSVFVCLI 766

Query: 440 DGLAKKGCMEKAMVL-YG 456
            GL +    ++A+ L YG
Sbjct: 767 KGLVEVKKWDEALQLCYG 784



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 65/305 (21%), Positives = 105/305 (34%), Gaps = 74/305 (24%)

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           TL  SL  R C  A     D + +  + P+  TYN L+  L   G VD       +M   
Sbjct: 11  TLRASL-RRTCSHAAGDSEDPLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSES 69

Query: 392 NCQPDIVTYNTVLGALCKEG--------------------------------MLNEALQL 419
               D  T      ALCKEG                                  +EA+  
Sbjct: 70  GFCMDRFTVGCFAHALCKEGRWADALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSF 129

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           LH +  +SC P ++TY TL+ G  KK  +     +   MM  G +P+     +L+  +C 
Sbjct: 130 LHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCN 189

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV--------------------- 518
                 A  LL  +   G       Y + I  +C  +K+                     
Sbjct: 190 EKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANC 249

Query: 519 --------------------DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                               D A Q+++ M+   + PD + +S ++  +      E+A+ 
Sbjct: 250 VLNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFL 309

Query: 559 LWQKL 563
           L+Q++
Sbjct: 310 LFQEM 314


>gi|225439731|ref|XP_002272943.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic [Vitis vinifera]
          Length = 772

 Score =  237 bits (604), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 242/453 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N +++  C   ++  A  +++ M      PD      L++G I    +  A 
Sbjct: 207 IKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGAL 266

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + MV +G     +T N++V G CK G+I   ++ +DEMS  G  PD  T+N+++  +
Sbjct: 267 RIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGL 326

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G  K A+      L++G  P + TY  LI  +CK   +  A+E+L+ M +   SP+ 
Sbjct: 327 CRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNT 386

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L++  CK+ + ++A  +   L S+G+ P+  T+N+L+  L          ++ + 
Sbjct: 387 VTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEE 446

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P  FTYN+LI+ LC  G ++ A++   +M S  C  ++VTYNT++   CK   
Sbjct: 447 MKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKR 506

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA ++   +     S  ++TYNTLIDGL K   +E+A  L  QM+  G+ PD  T+ +
Sbjct: 507 IEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNS 566

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+  FCRA  +++A D+++ +   G +  +  Y  +I GL K+ +V++A ++L  +    
Sbjct: 567 LLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKG 626

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                  ++ ++K +  +  T EA +L+++++E
Sbjct: 627 MVLAPQTYNPVIKALFREKRTSEAVRLFREMME 659



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 142/475 (29%), Positives = 236/475 (49%), Gaps = 36/475 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMS 181
           +++++       +A  ++DIM     +    F  N L+  L+  ++++    V   MV  
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSR 205

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD  T+N+++  LC+  QIR AI +++EM   G  PD  T+ T+++   + G    A
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGA 265

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQ------------------------------- 270
           +   +  +  GCP   +T  +L+   CK+                               
Sbjct: 266 LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNG 325

Query: 271 -CGIAR---AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
            C I     A+E+LD M  EG  PDI TYNSL+   CK G+ ++AV ++N ++ R   PN
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPN 385

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           ++TYNTL+ +L      +   ++  ++      P V T+N LI GLC       A+  F 
Sbjct: 386 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFE 445

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M +K C PD  TYN ++ +LC  G L EAL LL  +  S CS  ++TYNTLIDG  K  
Sbjct: 446 EMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNK 505

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +E+A  ++ +M   GIS + +T+ TLI G C+  +VEEA  L+ ++   G K     Y 
Sbjct: 506 RIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYN 565

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            ++   C++  +  A  +++ M S+  +PD   + T++  ++  G  E A +L +
Sbjct: 566 SLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLR 620



 Score =  233 bits (595), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 232/452 (51%), Gaps = 1/452 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++ +    ID M+     PD     +L+ GL RI  ++ A ++L +M
Sbjct: 283 TVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVM 342

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD  TYN ++ GLCK G++  A+ +L++M +    P+ +TYNT++ T+    + 
Sbjct: 343 LQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQV 402

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A    +    KG  P + T+  LI+ +C       A+E+ ++M  +GC PD  TYN L
Sbjct: 403 EEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNML 462

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C +G+ ++A+ ++  + S G   N +TYNTL+         +  ++I D M     
Sbjct: 463 IDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNKRIEEAEEIFDEMELQGI 522

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S  V TYN LI+GLCK   V+ A    +QM+ +  +PD  TYN++L   C+ G + +A  
Sbjct: 523 SRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLMEGLKPDKFTYNSLLTYFCRAGDIKKAAD 582

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  +  + C P  +TY TLI GL+K G +E A  L   +   G+     T+  +I    
Sbjct: 583 IVQTMTSNGCEPDSVTYGTLILGLSKAGRVELASRLLRTVQLKGMVLAPQTYNPVIKALF 642

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-SKKVDMAIQVLELMISSRYKPDD 537
           R  +  EAV L +E+ ++G+      Y++V  GLC     +  A+  L  M    + PD 
Sbjct: 643 REKRTSEAVRLFREMMEKGDPPDAVTYKVVFRGLCSGGGPIGEAVDFLVEMTDKGFLPDF 702

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           + F  + + +    M +   KL  ++++   F
Sbjct: 703 SSFLMLAEGLCALSMEDTLIKLVNRVMKQANF 734



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 219/413 (53%), Gaps = 5/413 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C  G +  A +++D+M +    PD     +LI GL ++  +E+A ++L
Sbjct: 315 DRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEIL 374

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M++    P+T+TYN ++  LCK  Q+  A  L   ++  G  PDV T+N++++ +   
Sbjct: 375 NQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLT 434

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              + A+  +++   KGC P   TY +LI+ +C +  +  A+ +L +M   GCS ++VTY
Sbjct: 435 NNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTY 494

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK  + ++A  + + +  +G+  N +TYNTL+  L      +   +++D M  
Sbjct: 495 NTLIDGFCKNKRIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQMLM 554

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P  FTYN L+   C+ G + +A +    M S  C+PD VTY T++  L K G +  
Sbjct: 555 EGLKPDKFTYNSLLTYFCRAGDIKKAADIVQTMTSNGCEPDSVTYGTLILGLSKAGRVEL 614

Query: 416 ALQLLHL--LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           A +LL    L G   +P   TYN +I  L ++    +A+ L+ +MME G  PD +T++ +
Sbjct: 615 ASRLLRTVQLKGMVLAPQ--TYNPVIKALFREKRTSEAVRLFREMMEKGDPPDAVTYKVV 672

Query: 474 IWGFCR-ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
             G C     + EAVD L E+  +G     S++ ++  GLC     D  I+++
Sbjct: 673 FRGLCSGGGPIGEAVDFLVEMTDKGFLPDFSSFLMLAEGLCALSMEDTLIKLV 725



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 210/408 (51%), Gaps = 1/408 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           LI    + +  ++A  V+ IM    G+  D  TYN ++  L    +++    +   M   
Sbjct: 146 LIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNVLVDGNKLKLVEIVNSRMVSR 205

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G +PDV T+N +++ +    + + AI   ++    G  P   T+T L++   ++  +  A
Sbjct: 206 GIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPDEKTFTTLMQGFIEEGNMNGA 265

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + + + M   GC    VT N LV+  CK+G+ ++ +  I+ + + G  P+  T+N+L++ 
Sbjct: 266 LRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFIDEMSNEGFRPDRFTFNSLVNG 325

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G      +ILD+M +    P +FTYN LI GLCK G V+ A+   NQM+ ++  P+
Sbjct: 326 LCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLGEVEEAVEILNQMILRDFSPN 385

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            VTYNT++  LCKE  + EA +L  +L      P + T+N+LI GL        AM L+ 
Sbjct: 386 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTNNHRLAMELFE 445

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M   G  PD+ T+  LI   C   ++EEA+ LLKE+   G       Y  +I G CK+K
Sbjct: 446 EMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEMESSGCSRNVVTYNTLIDGFCKNK 505

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +++ A ++ + M       +   ++T++  +  +   EEA +L  +++
Sbjct: 506 RIEEAEEIFDEMELQGISRNVVTYNTLIDGLCKNRRVEEAAQLMDQML 553



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 106/417 (25%), Positives = 192/417 (46%), Gaps = 37/417 (8%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAI 242
           +P   T   +   L ++    S + LLD  S      P  + Y  +LR +  +G F    
Sbjct: 66  LPQNFTPKQLRDALRRQSDEDSILDLLDWASKQPNFVPSSVIYEEVLRKLGKDGSFGSMR 125

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE---------------- 286
              ++    GC     T+ ILIE   K      A+ V+D M  E                
Sbjct: 126 RVLQEMKHTGCEIRRGTFLILIESYAKFELFDEAVAVVDIMEEEFGLKLDAFTYNFLLNV 185

Query: 287 --------------------GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
                               G  PD+ T+N L+   C+  +   A+L++  + S G+ P+
Sbjct: 186 LVDGNKLKLVEIVNSRMVSRGIKPDVTTFNILIKALCRAHQIRPAILMMEEMGSYGLSPD 245

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
             T+ TL+      G  +   +I + M  A    +  T N+L++G CK G ++  ++  +
Sbjct: 246 EKTFTTLMQGFIEEGNMNGALRIREQMVAAGCPSSNVTVNVLVHGYCKEGRIEEVLSFID 305

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M ++  +PD  T+N+++  LC+ G +  AL++L ++      P + TYN+LI GL K G
Sbjct: 306 EMSNEGFRPDRFTFNSLVNGLCRIGHVKHALEILDVMLQEGFDPDIFTYNSLIFGLCKLG 365

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +E+A+ +  QM+    SP+ +T+ TLI   C+ +QVEEA +L + +  +G       + 
Sbjct: 366 EVEEAVEILNQMILRDFSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFN 425

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +I GLC +    +A+++ E M +    PD+  ++ ++  +   G  EEA  L +++
Sbjct: 426 SLIQGLCLTNNHRLAMELFEEMKTKGCHPDEFTYNMLIDSLCSRGRLEEALSLLKEM 482


>gi|297816676|ref|XP_002876221.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322059|gb|EFH52480.1| hypothetical protein ARALYDRAFT_906766 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 754

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 147/459 (32%), Positives = 234/459 (50%), Gaps = 15/459 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF-----HFCINLI-RGLIRIDRIE 169
           DEKT   I+Q +   G L  A ++      R Q+ +F     +  +N+I  G  +  R+E
Sbjct: 223 DEKTFTTIMQGYIEEGDLDGALRI------REQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276

Query: 170 KASKVLQIMV-MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            A   +Q M    G  PD  T+N +V GLCK G ++ AI ++D M   G +PDV TYN++
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +   G+ K+A+ F    + + C P  +TY  LI  +CK+  +  A E+   +  +G 
Sbjct: 337 ISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD+ T+NSL+   C    +  A+ +   + S+G EP+  TYN L+ SL S+G  D    
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M  +  + +V TYN LI+G CK   +  A   F++M       + VTYNT++  LC
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K   + +A QL+  +      P   TYN+L+    + G ++KA  +   M  NG  PD +
Sbjct: 517 KSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL-EL 527
           T+ TLI G C+A +VE A  LL+ I  +G  +   AY  VI GL + +K   AI +  E+
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREM 636

Query: 528 MISSRYKPDDTVFSTIVKKVAD-DGMTEEAYKLWQKLIE 565
           +  +   PD   +  + + + +  G   EA     +L+E
Sbjct: 637 LEQNEAAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLE 675



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 130/431 (30%), Positives = 228/431 (52%), Gaps = 5/431 (1%)

Query: 138 KLIDIMARRNQI----PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMM 193
           KL++I   +  +    PD      LI+ L R  ++  A  +L+ M   G VPD  T+  +
Sbjct: 171 KLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTI 230

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK-G 252
           + G  + G +  A+ + ++M   GC    ++ N I+      G+ + A+ F ++   + G
Sbjct: 231 MQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDG 290

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P   T+  L+  +CK   +  AIE++D M  EG  PD+ TYNS+++  CK G+  +AV
Sbjct: 291 FFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAV 350

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
             ++ +++R   PN++TYNTL+ +L      +   ++  ++      P V T+N LI GL
Sbjct: 351 EFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGL 410

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           C       A+  F +M SK C+PD  TYN ++ +LC +G L+EAL +L  +  S C+  +
Sbjct: 411 CLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSV 470

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           ITYNTLIDG  K   + +A  ++ +M  +G+S + +T+ TLI G C++ +VE+A  L+ +
Sbjct: 471 ITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDASQLMDQ 530

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +   G K     Y  ++   C+   +  A  +++ M S+  +PD   + T++  +   G 
Sbjct: 531 MIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGR 590

Query: 553 TEEAYKLWQKL 563
            E A KL + +
Sbjct: 591 VEVASKLLRSI 601



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 232/437 (53%), Gaps = 7/437 (1%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           + + DG F   D+ T N ++   C  G +  A +++D+M +    PD +   ++I GL +
Sbjct: 285 MSNQDGFF--PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           +  +++A + L  M+     P+T+TYN ++  LCK  Q+  A  L   ++  G  PDV T
Sbjct: 343 LGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           +N++++ +      + A+  +++   KGC P   TY +LI+ +C +  +  A+ +L  M 
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCW 343
           + GC+  ++TYN+L++  CK  K  +A  + + +   G+  NS+TYNTL+  L  SR   
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           DA  +++D M      P  FTYN L+   C+ G + +A +    M S  C+PDIVTY T+
Sbjct: 523 DA-SQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NG 462
           +  LCK G +  A +LL  +     +     YN +I GL +K    +A+ L+ +M+E N 
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGIALTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641

Query: 463 ISPDDITHRTLIWGFCR-ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
            +PD +++R +  G C     + EAVD L E+ ++G     S+  ++  GL      +  
Sbjct: 642 AAPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETL 701

Query: 522 IQVLEL-MISSRYKPDD 537
           ++++ + M  +R+  ++
Sbjct: 702 VKLVNMVMQKARFSEEE 718



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 124/415 (29%), Positives = 215/415 (51%), Gaps = 1/415 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD HF   ++  L+  + ++        M + G  PD  T+N+++  LC+  Q+R AI +
Sbjct: 152 PDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L++M   G  PD  T+ TI++   + G    A+   +  +  GC    ++  +++   CK
Sbjct: 212 LEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271

Query: 270 QCGIARAIEVLDDMA-IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           +  +  A+  + +M+  +G  PD  T+N+LVN  CK G    A+ +++ +L  G +P+  
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TYN+++  L   G      + LD M     SP   TYN LI+ LCK   V+ A      +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
            SK   PD+ T+N+++  LC       A++L   +    C P   TYN LID L  KG +
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           ++A+ +  QM  +G +   IT+ TLI GFC+A+++ EA ++  E+   G    +  Y  +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKIREAEEIFDEMEVHGVSRNSVTYNTL 511

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           I GLCKS++V+ A Q+++ MI    KPD   +++++      G  ++A  + Q +
Sbjct: 512 IDGLCKSRRVEDASQLMDQMIMEGQKPDKFTYNSLLTHFCRGGDIKKAADIVQAM 566



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 183/381 (48%), Gaps = 37/381 (9%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK---------- 269
           P+   Y  IL  +  +G F       +D    GC      + ILIE   +          
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQFELQDEILGV 140

Query: 270 ------QCGIA-------RAIEVLDD-------------MAIEGCSPDIVTYNSLVNFSC 303
                   G+        R + +L D             M++ G  PD+ T+N L+   C
Sbjct: 141 VHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           +  +   A+L++ ++ S G+ P+  T+ T++      G  D   +I + M E   S +  
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           + N++++G CK G V+ A+N   +M +++   PD  T+NT++  LCK G +  A++++ +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P + TYN++I GL K G +++A+    QM+    SP+ +T+ TLI   C+ +Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLCKENQ 380

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEEA +L + +  +G       +  +I GLC ++   +A+++ E M S   +PD+  ++ 
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++  +   G  +EA  + +++
Sbjct: 441 LIDSLCSKGKLDEALNMLKQM 461



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 76/315 (24%), Positives = 142/315 (45%), Gaps = 43/315 (13%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           SP+   Y  ++    + G +DD   ++ ++ + G E  +  +  L+ S      ++  D+
Sbjct: 80  SPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILIESYAQ---FELQDE 136

Query: 349 ILDIMN-------------------------------EASHS--------PTVFTYNILI 369
           IL +++                               E +H+        P V T+N+LI
Sbjct: 137 ILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGIKPDVSTFNVLI 196

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
             LC+   +  AI     M S    PD  T+ T++    +EG L+ AL++   +    CS
Sbjct: 197 KALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALRIREQMVEFGCS 256

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMM-ENGISPDDITHRTLIWGFCRADQVEEAVD 488
              ++ N ++ G  K+G +E A+    +M  ++G  PD  T  TL+ G C+A  V+ A++
Sbjct: 257 WSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIE 316

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           ++  + + G       Y  VI GLCK  +V  A++ L+ MI+    P+   ++T++  + 
Sbjct: 317 IMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMITRDCSPNTVTYNTLISTLC 376

Query: 549 DDGMTEEAYKLWQKL 563
            +   EEA +L + L
Sbjct: 377 KENQVEEATELARVL 391



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 70/295 (23%), Positives = 138/295 (46%), Gaps = 39/295 (13%)

Query: 309 DDAVLVINNLLSR--GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           D A L + NL S+     P    Y  +L  LG  G +D + KIL+ M  +        + 
Sbjct: 63  DSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFL 122

Query: 367 ILINGLCKY-------GLVDRAINSF-------------NQMVSKN-------------- 392
           ILI    ++       G+V   I+ F             N +V  N              
Sbjct: 123 ILIESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSV 182

Query: 393 --CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
              +PD+ T+N ++ ALC+   L  A+ +L  +      P   T+ T++ G  ++G ++ 
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDG 242

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVI 509
           A+ +  QM+E G S  +++   ++ GFC+  +VE+A++ ++E+  +     +   +  ++
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +GLCK+  V  AI+++++M+   Y PD   +++++  +   G  +EA +   ++I
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEFLDQMI 357



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 40/188 (21%), Positives = 90/188 (47%), Gaps = 2/188 (1%)

Query: 381 AINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           A+  FN    K N  P+   Y  +L  L + G  ++  ++L  +  S C      +  LI
Sbjct: 66  ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMRKILEDMKNSGCEMGTSPFLILI 125

Query: 440 DGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +  A+    ++ + +   M+++ G+ PD   +  ++      + ++       ++   G 
Sbjct: 126 ESYAQFELQDEILGVVHWMIDDFGLKPDTHFYNRMLNLLVDGNNLKLVEIAHAKMSVWGI 185

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           K   S + ++I  LC++ ++  AI +LE M S    PD+  F+TI++   ++G  + A +
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTIMQGYIEEGDLDGALR 245

Query: 559 LWQKLIEW 566
           + ++++E+
Sbjct: 246 IREQMVEF 253


>gi|326525465|dbj|BAJ88779.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 680

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 233/453 (51%), Gaps = 3/453 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C  G++ DA ++++ ++     PD      +++GL    R +    +   M
Sbjct: 224 TYNVIINGMCREGRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEM 283

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V    VP+ +T++M+V   C+ G +  AI +L +MS  GC P+    N ++  +   G+ 
Sbjct: 284 VDKKCVPNEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRV 343

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F  +    GC P  I+YT ++  +C+      A E+L +M  + C P+ VT+N+ 
Sbjct: 344 DDAYDFLNNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTF 403

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C++G  + A+ +I  +   G     +TYN L+H    +G    VD  L++ N    
Sbjct: 404 ICILCQKGLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQG---RVDSALELFNNLPC 460

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  L+ GLC    +D A     +M+ K+C  + VT+N ++   C++G + EA++
Sbjct: 461 EPNTITYTTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAME 520

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L++ +    C+P LIT+NTL+DG+ K    E+A+ L   ++  G+S D IT+ +++    
Sbjct: 521 LVNQMMEHGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLS 580

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R D+ EEA+ +L  +   G + +   Y  ++  LCK  + D AI     M+S+   P+++
Sbjct: 581 REDRTEEAIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNES 640

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
            +  +++ +A +G+ +EA  +  +L    V  K
Sbjct: 641 TYIILIEGLAHEGLLKEARYVLSELYAKGVLSK 673



 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 102/317 (32%), Positives = 179/317 (56%), Gaps = 3/317 (0%)

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           L++GC P ++TYT+L+E VCK  G   A+ VLD+M  +GC+P+IVTYN ++N  C++G+ 
Sbjct: 179 LQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRV 238

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           DDA  ++N L S G +P+ ++Y T+L  L +   WD V  +   M +    P   T+++L
Sbjct: 239 DDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDML 298

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           +   C+ G+V+RAI    QM    C P+    N V+ A+CK+G +++A   L+ +    C
Sbjct: 299 VRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGC 358

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P  I+Y T++ GL + G  E A  L  +M+     P+++T  T I   C+   +E+A+ 
Sbjct: 359 NPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIK 418

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L++ + + G  +    Y  ++HG C   +VD A   LEL  +   +P+   ++T++  + 
Sbjct: 419 LIELMPEYGCSVGIVTYNALVHGFCVQGRVDSA---LELFNNLPCEPNTITYTTLLTGLC 475

Query: 549 DDGMTEEAYKLWQKLIE 565
                + A +L  ++I+
Sbjct: 476 HAERLDAAAELLAEMIQ 492



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 184/349 (52%), Gaps = 3/349 (0%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           GC+P V+TY  +L  +  +  F +A+    +   KGC P ++TY ++I  +C++  +  A
Sbjct: 182 GCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGRVDDA 241

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            E+L+ ++  G  PDIV+Y +++   C   ++DD  ++   ++ +   PN +T++ L+  
Sbjct: 242 KEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTFDMLVRF 301

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               G  +   ++L  M++   +P     NI+IN +CK G VD A +  N M    C PD
Sbjct: 302 FCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGMYGCNPD 361

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            ++Y TVL  LC+ G    A +LL  +   +C P  +T+NT I  L +KG +E+A+ L  
Sbjct: 362 TISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQAIKLIE 421

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M E G S   +T+  L+ GFC   +V+ A++L   +    N +    Y  ++ GLC ++
Sbjct: 422 LMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLPCEPNTI---TYTTLLTGLCHAE 478

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++D A ++L  MI      +   F+ +V      G  EEA +L  +++E
Sbjct: 479 RLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 527



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 196/382 (51%), Gaps = 3/382 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T + +++ FC  G +  A +++  M++    P+   C  +I  + +  R++ A   L
Sbjct: 291 NEVTFDMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFL 350

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M M G  PDTI+Y  ++ GLC+ G+   A  LL EM    C P+ +T+NT +  +   
Sbjct: 351 NNMGMYGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQK 410

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  +QAI   +     GC   ++TY  L+   C Q  +  A+E+ +++    C P+ +TY
Sbjct: 411 GLIEQAIKLIELMPEYGCSVGIVTYNALVHGFCVQGRVDSALELFNNLP---CEPNTITY 467

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L+   C   + D A  ++  ++ +    N++T+N L+     +G  +   ++++ M E
Sbjct: 468 TTLLTGLCHAERLDAAAELLAEMIQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMME 527

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P + T+N L++G+ K    + A+   + +VSK    D +TY++V+  L +E    E
Sbjct: 528 HGCTPNLITFNTLLDGITKDCNSEEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEE 587

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+Q+LH +      P +  YN ++  L K+   ++A+  +  M+ NG  P++ T+  LI 
Sbjct: 588 AIQMLHAVQDMGMRPKVGMYNKILFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIE 647

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G      ++EA  +L E+  +G
Sbjct: 648 GLAHEGLLKEARYVLSELYAKG 669



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 132/251 (52%)

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           + +L RG +P+ +TY  LL ++     +     +LD M     +P + TYN++ING+C+ 
Sbjct: 176 STMLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCRE 235

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G VD A    N++ S   QPDIV+Y TVL  LC     ++   L   +    C P  +T+
Sbjct: 236 GRVDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           + L+    + G +E+A+ +  QM ++G +P+      +I   C+  +V++A D L  +G 
Sbjct: 296 DMLVRFFCRGGMVERAIQVLQQMSQHGCTPNTTLCNIVINAICKQGRVDDAYDFLNNMGM 355

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G      +Y  V+ GLC++ + + A ++L  M+     P++  F+T +  +   G+ E+
Sbjct: 356 YGCNPDTISYTTVLRGLCRAGRWEHAKELLPEMVRKNCPPNEVTFNTFICILCQKGLIEQ 415

Query: 556 AYKLWQKLIEW 566
           A KL + + E+
Sbjct: 416 AIKLIELMPEY 426



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 55/245 (22%), Positives = 112/245 (45%), Gaps = 38/245 (15%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC +G++  A +L + +      P+      L+ GL   +R++ A+++L  M
Sbjct: 434 TYNALVHGFCVQGRVDSALELFNNLPCE---PNTITYTTLLTGLCHAERLDAAAELLAEM 490

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +      + +T+N++V   C++G +  A+ L+++M   GC P++IT+NT+L  +  +   
Sbjct: 491 IQKDCPLNAVTFNVLVSFFCQKGFVEEAMELVNQMMEHGCTPNLITFNTLLDGITKDCNS 550

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIE--------------------------------- 265
           ++A+      + KG     ITY+ +++                                 
Sbjct: 551 EEALELLHGLVSKGVSLDTITYSSVVDVLSREDRTEEAIQMLHAVQDMGMRPKVGMYNKI 610

Query: 266 --QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
              +CK+C   +AI+    M   GC P+  TY  L+     +G   +A  V++ L ++G+
Sbjct: 611 LFALCKRCETDQAIDFFAYMVSNGCMPNESTYIILIEGLAHEGLLKEARYVLSELYAKGV 670

Query: 324 EPNSI 328
              S+
Sbjct: 671 LSKSL 675



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/118 (22%), Positives = 62/118 (52%)

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M++ G  P  +T+  L+   C++    EA+++L E+  +G       Y ++I+G+C+  +
Sbjct: 178 MLQRGCQPSVVTYTVLLEAVCKSSGFGEAMNVLDEMRAKGCTPNIVTYNVIINGMCREGR 237

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           VD A ++L  + S  ++PD   ++T++K +      ++   L+ ++++ K      T 
Sbjct: 238 VDDAKEILNRLSSYGFQPDIVSYTTVLKGLCAARRWDDVKVLFAEMVDKKCVPNEVTF 295


>gi|255572227|ref|XP_002527053.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533615|gb|EEF35353.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 677

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 134/487 (27%), Positives = 249/487 (51%), Gaps = 2/487 (0%)

Query: 81  ESHVLAVNKKLRGLTITKKSHD--PSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           E +V  +N  +  L    K  D  P L   +   +  D  T N ++  +C  G L +A +
Sbjct: 182 ELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFE 241

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           +++ M+ +   P       +I GL +  R  +A  V   M+  G  PDT TYN ++   C
Sbjct: 242 VMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESC 301

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           +      A  +  +M   G  PD+I++++++     NG   QA+ +++D    G  P  +
Sbjct: 302 RNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNV 361

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
            YTILI   C+   ++ A+E+ D M  +GC+ D+V YN+++N  CK+    DA  + + +
Sbjct: 362 IYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEM 421

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           + RG+ P+  T+ TL+H     G       +  IM + +  P + TYNILI+G CK   +
Sbjct: 422 VERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEM 481

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           ++A   +N+M+S+   P+ ++Y  ++   C  G ++EA +L   +      P L+T NT+
Sbjct: 482 EKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNTV 541

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I G  + G + KA    G+M+  G+ PD IT+ TLI GF + + +++A  L+ ++  +G 
Sbjct: 542 IKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDKAFFLINKMETKGL 601

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +     Y ++++G C+  ++  A  +L  MI     PD + ++T++         +EA++
Sbjct: 602 QPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLINGYVSQDNLKEAFR 661

Query: 559 LWQKLIE 565
              ++++
Sbjct: 662 FHDEMLQ 668



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 224/446 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++++    KL + +    I+ R+  +   + C +L+ GL+++  ++ A +V   +  SG
Sbjct: 121 LIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLAWEVYNEIARSG 180

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T N+MV  LCK  +I      L +M   G   D++TYNT++      G   +A 
Sbjct: 181 IELNVYTLNIMVNALCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAF 240

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG  P L TY  +I  +CK+    RA  V ++M   G SPD  TYN+L+  S
Sbjct: 241 EVMNSMSGKGLKPTLFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVES 300

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+   + +A  + +++L RG+ P+ I++++L+      G  D        M  +   P  
Sbjct: 301 CRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDN 360

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y ILING C+ G++  A+   ++M+ + C  D+V YNT+L  LCK+ +L +A  L   
Sbjct: 361 VIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDE 420

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   T+ TLI G  K+G M KA+ L+G M +  I PD +T+  LI GFC+  +
Sbjct: 421 MVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTE 480

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E+A +L  E+  R     + +Y ++++G C    V  A ++ + MI    KP     +T
Sbjct: 481 MEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIRKGIKPTLVTCNT 540

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++K     G   +A +   K+I   V
Sbjct: 541 VIKGYCRSGDLSKADEFLGKMISEGV 566



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 194/382 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C      +A  +   M  R   PD     +LI    R   +++A    
Sbjct: 289 DTTTYNTLLVESCRNNNFLEAKDIFSDMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYF 348

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  SG VPD + Y +++ G C+ G +  A+ + D+M   GC  DV+ YNTIL  +   
Sbjct: 349 RDMKTSGLVPDNVIYTILINGYCRNGMMSEALEIRDKMLEQGCALDVVAYNTILNGLCKK 408

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A   + + + +G  P   T+T LI   CK+  + +A+ +   M  +   PDIVTY
Sbjct: 409 KLLADANALFDEMVERGVVPDFCTFTTLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTY 468

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  CK  + + A  + N ++SR + PN I+Y  L++   + G      ++ D M  
Sbjct: 469 NILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAFRLWDEMIR 528

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               PT+ T N +I G C+ G + +A     +M+S+   PD +TYNT++    K   +++
Sbjct: 529 KGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLINGFVKGEYMDK 588

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L++ +      P ++TYN +++G  ++G M++A ++  +M+E GI PD  T+ TLI 
Sbjct: 589 AFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPDRSTYTTLIN 648

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G+   D ++EA     E+ +RG
Sbjct: 649 GYVSQDNLKEAFRFHDEMLQRG 670



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 215/483 (44%), Gaps = 57/483 (11%)

Query: 106 PSSDGPFVENDEKTNNKILQNF--CSRGKLTDASKLIDIMARRNQIPDFHFCINLI---- 159
           P+S  P    D     KIL N       +L+DA  LI  M RR+ +       +LI    
Sbjct: 53  PTSSAP---PDSFLVEKILLNLRRVRSKRLSDAQTLILRMIRRSGVSRVEIVESLISMSS 109

Query: 160 -------------RGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
                        R  ++  ++ + +   +I+   G +      N ++GGL K G +  A
Sbjct: 110 TCGVDNLVFDLLIRSYVQARKLNEGTDTFKILRRKGFLVSINACNSLLGGLVKMGWVDLA 169

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
             + +E++ SG E +V T N                                   I++  
Sbjct: 170 WEVYNEIARSGIELNVYTLN-----------------------------------IMVNA 194

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +CK   I      L DM  +G   DIVTYN+L+N  C++G   +A  V+N++  +G++P 
Sbjct: 195 LCKDHKIDDVKPFLIDMEQKGIFADIVTYNTLINAYCREGLLGEAFEVMNSMSGKGLKPT 254

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
             TYN +++ L  +G +     + + M     SP   TYN L+   C+      A + F+
Sbjct: 255 LFTYNAVINGLCKKGRYVRAKGVFNEMLSIGLSPDTTTYNTLLVESCRNNNFLEAKDIFS 314

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M+ +   PD++++++++G   + G L++AL     +  S   P  + Y  LI+G  + G
Sbjct: 315 DMLHRGVSPDLISFSSLIGVSSRNGHLDQALMYFRDMKTSGLVPDNVIYTILINGYCRNG 374

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            M +A+ +  +M+E G + D + + T++ G C+   + +A  L  E+ +RG       + 
Sbjct: 375 MMSEALEIRDKMLEQGCALDVVAYNTILNGLCKKKLLADANALFDEMVERGVVPDFCTFT 434

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            +IHG CK   +  A+ +  +M     KPD   ++ ++         E+A +LW ++I  
Sbjct: 435 TLIHGHCKEGNMGKALSLFGIMTQKNIKPDIVTYNILIDGFCKTTEMEKANELWNEMISR 494

Query: 567 KVF 569
           K+F
Sbjct: 495 KIF 497



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 58/215 (26%), Positives = 102/215 (47%), Gaps = 2/215 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  FC   ++  A++L + M  R   P+      L+ G   +  + +A 
Sbjct: 461 IKPDIVTYNILIDGFCKTTEMEKANELWNEMISRKIFPNHISYAILVNGYCNLGFVSEAF 520

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M+  G  P  +T N ++ G C+ G +  A   L +M   G  PD ITYNT++   
Sbjct: 521 RLWDEMIRKGIKPTLVTCNTVIKGYCRSGDLSKADEFLGKMISEGVGPDSITYNTLING- 579

Query: 233 FDNGKFKQAIGFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           F  G++     F  +++  KG  P ++TY +++   C+Q  +  A  +L  M   G  PD
Sbjct: 580 FVKGEYMDKAFFLINKMETKGLQPDVVTYNVILNGFCRQGRMQEAELILRKMIERGIDPD 639

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
             TY +L+N    Q    +A    + +L RG  P+
Sbjct: 640 RSTYTTLINGYVSQDNLKEAFRFHDEMLQRGFVPD 674


>gi|302788594|ref|XP_002976066.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
 gi|300156342|gb|EFJ22971.1| hypothetical protein SELMODRAFT_53130 [Selaginella moellendorffii]
          Length = 440

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/380 (35%), Positives = 215/380 (56%), Gaps = 9/380 (2%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+ ITYN ++ GLC  G++  A AL + M  +G  PDV+TYNT+L      G+  +A+  
Sbjct: 8   PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKI 67

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           +   +++G  P ++TY  LI   CK   +  A  +L  M  E   PD+VTYNSLVN  CK
Sbjct: 68  FDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCK 127

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS--RGCWDAVDKILDIMNEASHSPTV 362
            G+ D+A ++I   + +G  PN ITY+TL+  L    RG  +A+ K+   + +  + P V
Sbjct: 128 NGRVDEARMLI---VDKGFSPNVITYSTLISGLCRELRGVSEAL-KLFGSVLKQGYEPEV 183

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYNILI+GL K   V+ A   F+ +V    +PD +TY   +  LCK G + +AL +L  
Sbjct: 184 PTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKD 243

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++   C P ++++N +I+GL K+  +++A VL   M   G SP+ I+  TLI G CRA +
Sbjct: 244 MDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGK 303

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK---KVDMAIQVLELMISSRYKPDDTV 539
            ++A+   KE+ KRG K     Y +++ GLCK++   ++  AI + + MI     PD   
Sbjct: 304 WKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVT 363

Query: 540 FSTIVKKVADDGMTEEAYKL 559
           +S ++  +   G  ++A +L
Sbjct: 364 YSALIDGLGKAGKLDDARRL 383



 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 131/430 (30%), Positives = 230/430 (53%), Gaps = 7/430 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   C+ G+++DA  L + M +    PD      L+ G  ++  +++A K+    
Sbjct: 12  TYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGFCKVGELDEALKIFDGA 71

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G VPD +TYN ++ G CK  ++  A  +L  M      PDV+TYN+++  +  NG+ 
Sbjct: 72  VKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDVVTYNSLVNGLCKNGRV 131

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC-GIARAIEVLDDMAIEGCSPDIVTYNS 297
            +A     D   KG  P +ITY+ LI  +C++  G++ A+++   +  +G  P++ TYN 
Sbjct: 132 DEARMLIVD---KGFSPNVITYSTLISGLCRELRGVSEALKLFGSVLKQGYEPEVPTYNI 188

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++   K+ + ++A  + + L+  G+EP++ITY   +  L   G  +    +L  M+E  
Sbjct: 189 LIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKG 248

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V ++N +INGLCK   VD A    + M +K C P+ +++NT++   C+ G   +A+
Sbjct: 249 CVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAM 308

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAK---KGCMEKAMVLYGQMMENGISPDDITHRTLI 474
                +      P ++TYN L+DGL K   +G +++A+ L+  M+E G  PD +T+  LI
Sbjct: 309 TTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALI 368

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G  +A ++++A  LL  +  +G       Y  +I GLC  +KVD A+++   M+     
Sbjct: 369 DGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCV 428

Query: 535 PDDTVFSTIV 544
           PD   + TI+
Sbjct: 429 PDTITYGTII 438



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 130/395 (32%), Positives = 209/395 (52%), Gaps = 36/395 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L  FC  G+L +A K+ D   +R  +PD      LI G  + D++++A ++L
Sbjct: 44  DVVTYNTLLHGFCKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRIL 103

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS------------------- 216
           Q MV    VPD +TYN +V GLCK G++  A  L+ +   S                   
Sbjct: 104 QRMVSENLVPDVVTYNSLVNGLCKNGRVDEARMLIVDKGFSPNVITYSTLISGLCRELRG 163

Query: 217 --------------GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
                         G EP+V TYN ++  +    +  +A   +   ++ G  P  ITYT+
Sbjct: 164 VSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTV 223

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
            I+ +CK   +  A+ +L DM  +GC PD+V++N+++N  CK+ + D+A ++++ + ++G
Sbjct: 224 FIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKG 283

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY---GLVD 379
             PN+I++NTL+      G W         M +    PTV TYNIL++GLCK    G + 
Sbjct: 284 CSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYNILVDGLCKARQEGRIK 343

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            AI  F+ M+ K   PD+VTY+ ++  L K G L++A +LL  +    C P + TYN+LI
Sbjct: 344 EAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAMEAKGCIPNVYTYNSLI 403

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            GL     +++A+ L+  M+E G  PD IT+ T+I
Sbjct: 404 SGLCGLEKVDEALELFVAMVEKGCVPDTITYGTII 438



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/327 (33%), Positives = 182/327 (55%), Gaps = 13/327 (3%)

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           GFW         P  ITY  L+  +C    ++ A  + + M   G SPD+VTYN+L++  
Sbjct: 5   GFW---------PNRITYNALLSGLCNGGRMSDAQALYERMIKAGYSPDVVTYNTLLHGF 55

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G+ D+A+ + +  + RG  P+ +TYN L++        D   +IL  M   +  P V
Sbjct: 56  CKVGELDEALKIFDGAVKRGFVPDVVTYNALINGFCKADKLDEAQRILQRMVSENLVPDV 115

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE-GMLNEALQLLH 421
            TYN L+NGLCK G VD A      +V K   P+++TY+T++  LC+E   ++EAL+L  
Sbjct: 116 VTYNSLVNGLCKNGRVDEA---RMLIVDKGFSPNVITYSTLISGLCRELRGVSEALKLFG 172

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +      P + TYN LIDGL K+  + +A  L+  ++++G+ PD IT+   I G C+A 
Sbjct: 173 SVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFSGLVKHGLEPDAITYTVFIDGLCKAG 232

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +VE+A+ +LK++ ++G      ++  VI+GLCK K+VD A  +L  M +    P+   F+
Sbjct: 233 RVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEKRVDEAEVLLSGMEAKGCSPNAISFN 292

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKV 568
           T++      G  ++A   ++++++  V
Sbjct: 293 TLICGQCRAGKWKKAMTTFKEMLKRGV 319



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 94/293 (32%), Positives = 155/293 (52%), Gaps = 6/293 (2%)

Query: 119 TNNKILQNFCS--RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           T + ++   C   RG +++A KL   + ++   P+      LI GL++ DR+ +A ++  
Sbjct: 149 TYSTLISGLCRELRG-VSEALKLFGSVLKQGYEPEVPTYNILIDGLLKEDRVNEAFELFS 207

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            +V  G  PD ITY + + GLCK G++  A+ +L +M   GC PDV+++N ++  +    
Sbjct: 208 GLVKHGLEPDAITYTVFIDGLCKAGRVEDALLMLKDMDEKGCVPDVVSHNAVINGLCKEK 267

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +  +A         KGC P  I++  LI   C+     +A+    +M   G  P +VTYN
Sbjct: 268 RVDEAEVLLSGMEAKGCSPNAISFNTLICGQCRAGKWKKAMTTFKEMLKRGVKPTVVTYN 327

Query: 297 SLVNFSCK---QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            LV+  CK   +G+  +A+ + + ++ +G  P+ +TY+ L+  LG  G  D   ++L  M
Sbjct: 328 ILVDGLCKARQEGRIKEAITLFDAMIEKGRVPDVVTYSALIDGLGKAGKLDDARRLLGAM 387

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
                 P V+TYN LI+GLC    VD A+  F  MV K C PD +TY T++ A
Sbjct: 388 EAKGCIPNVYTYNSLISGLCGLEKVDEALELFVAMVEKGCVPDTITYGTIISA 440


>gi|359475386|ref|XP_003631674.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 762

 Score =  236 bits (603), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/462 (29%), Positives = 229/462 (49%), Gaps = 15/462 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++ FCS G+L         M R   +P+      LI    ++ RI++A  +L+ M
Sbjct: 216 TYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSM 275

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ I+YN+++ GLC+ G ++ A  +L+EM   G  PD +TYNT+L      G F
Sbjct: 276 SSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNF 335

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA+    + +R G  P ++TYT LI  +CK   + RA+E  D M I G  P+  TY +L
Sbjct: 336 HQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTL 395

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   +QG  ++A  ++N +   G  P+ +TYN  +H        +    ++  M E   
Sbjct: 396 IDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGL 455

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V +Y+ +I+G C+ G +DRA     +MV K   PD VTY++++  LC+   L EA  
Sbjct: 456 APDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACD 515

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P   TY TLI+    +G + KA+ L+ +M+  G  PD +T+  LI G  
Sbjct: 516 LSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLN 575

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH---------------GLCKSKKVDMAIQ 523
           +  +  EA  LL ++    +   +  Y  +I                G C    +  A +
Sbjct: 576 KQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADR 635

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           V E M+   +KP + V++ I+      G   +A+ L++++I 
Sbjct: 636 VFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 677



 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 216/405 (53%), Gaps = 4/405 (0%)

Query: 160 RGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE 219
           RG +++     A +V + M+ S   P+  TYN+++ G C  G+++  +    EM  +GC 
Sbjct: 191 RGSVKLS----AEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCL 246

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P+V+TYNT++      G+  +A G  K    KG  P LI+Y ++I  +C++  +  A E+
Sbjct: 247 PNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEI 306

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L++M  +G +PD VTYN+L+N  CK+G +  A+++   ++  G+ P+ +TY  L++S+  
Sbjct: 307 LEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCK 366

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
               +   +  D M      P   TY  LI+G  + GL++ A    N+M      P +VT
Sbjct: 367 ARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVT 426

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           YN  +   C    + EAL ++  +     +P +++Y+T+I G  +KG +++A  +  +M+
Sbjct: 427 YNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMV 486

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           E G+SPD +T+ +LI G C   ++ EA DL +E+   G       Y  +I+  C    ++
Sbjct: 487 EKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLN 546

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            A+ + + MI   + PD   +S ++  +     T EA +L  KLI
Sbjct: 547 KALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLI 591



 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 131/453 (28%), Positives = 230/453 (50%), Gaps = 16/453 (3%)

Query: 129 SRGKLT-DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           SRG +   A ++   M R    P+ +    LIRG   +  ++K       M  +G +P+ 
Sbjct: 190 SRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNV 249

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +TYN ++   CK G+I  A  LL  MS  G +P++I+YN I+  +   G  K+A    ++
Sbjct: 250 VTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEE 309

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
              KG  P  +TY  L+   CK+    +A+ +  +M   G SP +VTY +L+N  CK   
Sbjct: 310 MGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARN 369

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            + A+   + +  RG+ PN  TY TL+     +G  +   +IL+ M E+  SP+V TYN 
Sbjct: 370 LNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNA 429

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
            I+G C    ++ A+    +MV K   PD+V+Y+T++   C++G L+ A Q+   +    
Sbjct: 430 FIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKG 489

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            SP  +TY++LI GL +   + +A  L  +M++ G+ PD+ T+ TLI  +C    + +A+
Sbjct: 490 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 549

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L  E+  +G       Y ++I+GL K  +   A ++L  +I     P D  + T+++  
Sbjct: 550 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 609

Query: 548 AD---------------DGMTEEAYKLWQKLIE 565
           ++                G+  EA ++++ ++E
Sbjct: 610 SNIEFKSVVALIKGFCMKGLMHEADRVFESMVE 642



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 202/381 (53%), Gaps = 2/381 (0%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF-DNGKFK-QAIGF 244
           +  +++MV        I  A+  ++    SG  P V++YN++L  +    G  K  A   
Sbjct: 142 SAVFDLMVKSYSHLNMIDQAVNTINLAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEV 201

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           +++ +R    P + TY ILI   C    + + +    +M   GC P++VTYN+L++  CK
Sbjct: 202 YREMIRSRVSPNVYTYNILIRGFCSVGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCK 261

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            G+ D+A  ++ ++ S+GM+PN I+YN +++ L   G      +IL+ M     +P   T
Sbjct: 262 MGRIDEAFGLLKSMSSKGMQPNLISYNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVT 321

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN L+NG CK G   +A+    +MV     P +VTY  ++ ++CK   LN A++    + 
Sbjct: 322 YNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFFDQMR 381

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P   TY TLIDG +++G + +A  +  +M E+G SP  +T+   I G C  +++E
Sbjct: 382 IRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVLERME 441

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA+ +++E+ ++G      +Y  +I G C+  ++D A Q+ + M+     PD   +S+++
Sbjct: 442 EALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTYSSLI 501

Query: 545 KKVADDGMTEEAYKLWQKLIE 565
           + + +     EA  L Q++++
Sbjct: 502 QGLCEMRRLTEACDLSQEMLD 522



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 183/390 (46%), Gaps = 15/390 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T N +L  +C  G    A  +   M R    P       LI  + +   + +A +  
Sbjct: 318 DEVTYNTLLNGYCKEGNFHQALVIHAEMVRNGVSPSVVTYTALINSMCKARNLNRAMEFF 377

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G  P+  TY  ++ G  ++G +  A  +L+EM+ SG  P V+TYN  +      
Sbjct: 378 DQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEMTESGFSPSVVTYNAFIHGHCVL 437

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + ++A+G  ++ + KG  P +++Y+ +I   C++  + RA ++  +M  +G SPD VTY
Sbjct: 438 ERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGELDRAFQMKQEMVEKGVSPDAVTY 497

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +SL+   C+  +  +A  +   +L  G+ P+  TY TL+++    G  +    + D M  
Sbjct: 498 SSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKALHLHDEMIH 557

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT------------- 402
               P   TY++LINGL K      A     +++ +   P  VTY+T             
Sbjct: 558 KGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENCSNIEFKSV 617

Query: 403 --VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             ++   C +G+++EA ++   +   +  P    YN +I G  + G + KA  LY +M+ 
Sbjct: 618 VALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVIIHGHCRGGNLPKAFNLYKEMIH 677

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLL 490
           +G  P  +T  TLI    +    EE  +++
Sbjct: 678 SGFVPHTVTVITLIKALFKEGMNEEMSEVI 707



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 103/395 (26%), Positives = 177/395 (44%), Gaps = 31/395 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++ + C    L  A +  D M  R   P+      LI G  R   + +A ++L  M
Sbjct: 356 TYTALINSMCKARNLNRAMEFFDQMRIRGLRPNERTYTTLIDGFSRQGLLNEAYRILNEM 415

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG  P  +TYN  + G C   ++  A+ ++ EM   G  PDV++Y+TI+      G+ 
Sbjct: 416 TESGFSPSVVTYNAFIHGHCVLERMEEALGVVQEMVEKGLAPDVVSYSTIISGFCRKGEL 475

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A    ++ + KG  P  +TY+ LI+ +C+   +  A ++  +M   G  PD  TY +L
Sbjct: 476 DRAFQMKQEMVEKGVSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTL 535

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C +G  + A+ + + ++ +G  P+++TY+ L++ L  +       ++L  +     
Sbjct: 536 INAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEES 595

Query: 359 SPTVFTYNILIN---------------GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
            P+  TY+ LI                G C  GL+  A   F  MV +N +P    YN +
Sbjct: 596 VPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKPGEAVYNVI 655

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +   C+ G L +A  L   +  S   P  +T  TLI  L K+G  E+   + G  + +  
Sbjct: 656 IHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVIGDTLRS-- 713

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
                         CR ++ E A  L++   K GN
Sbjct: 714 --------------CRLNEAELAKVLVEINHKEGN 734



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/240 (25%), Positives = 123/240 (51%), Gaps = 4/240 (1%)

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASH--SPTVFTYNILINGLCKYGLVDRAINSFN 386
           T  TL   L       +   I   + ++ H  + +   +++++       ++D+A+N+ N
Sbjct: 107 TAQTLAQELALSASDPSGSSIFQCLKDSYHVYNSSSAVFDLMVKSYSHLNMIDQAVNTIN 166

Query: 387 QMVSKNCQPDIVTYNTVLGALCK-EGMLN-EALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
              S    P +++YN+VL A+ +  G +   A ++   +  S  SP + TYN LI G   
Sbjct: 167 LAKSSGFMPGVLSYNSVLDAIVRSRGSVKLSAEEVYREMIRSRVSPNVYTYNILIRGFCS 226

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G ++K +  +G+M  NG  P+ +T+ TLI  +C+  +++EA  LLK +  +G +    +
Sbjct: 227 VGELQKGLGCFGEMERNGCLPNVVTYNTLIDAYCKMGRIDEAFGLLKSMSSKGMQPNLIS 286

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y ++I+GLC+   +  A ++LE M    + PD+  ++T++     +G   +A  +  +++
Sbjct: 287 YNVIINGLCREGSMKEAWEILEEMGYKGFTPDEVTYNTLLNGYCKEGNFHQALVIHAEMV 346



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 55/238 (23%), Positives = 100/238 (42%), Gaps = 20/238 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T + ++Q  C   +LT+A  L   M      PD      LI        + KA 
Sbjct: 490 VSPDAVTYSSLIQGLCEMRRLTEACDLSQEMLDMGLPPDEFTYTTLINAYCVEGDLNKAL 549

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M+  G +PD +TY++++ GL K+ + R A  LL ++      P  +TY+T++   
Sbjct: 550 HLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLLFKLIYEESVPSDVTYDTLIENC 609

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N +FK  +                    LI+  C +  +  A  V + M      P  
Sbjct: 610 -SNIEFKSVVA-------------------LIKGFCMKGLMHEADRVFESMVERNHKPGE 649

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
             YN +++  C+ G    A  +   ++  G  P+++T  TL+ +L   G  + + +++
Sbjct: 650 AVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 707



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 54/228 (23%), Positives = 95/228 (41%), Gaps = 17/228 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T   ++  +C  G L  A  L D M  +  +PD      LI GL +  R  +A ++L
Sbjct: 528 DEFTYTTLINAYCVEGDLNKALHLHDEMIHKGFLPDAVTYSVLINGLNKQARTREAKRLL 587

Query: 176 QIMVMSGGVPDTITYNMMV---------------GGLCKRGQIRSAIALLDEMSVSGCEP 220
             ++    VP  +TY+ ++                G C +G +  A  + + M     +P
Sbjct: 588 FKLIYEESVPSDVTYDTLIENCSNIEFKSVVALIKGFCMKGLMHEADRVFESMVERNHKP 647

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
               YN I+      G   +A   +K+ +  G  P+ +T   LI+ + K+       EV+
Sbjct: 648 GEAVYNVIIHGHCRGGNLPKAFNLYKEMIHSGFVPHTVTVITLIKALFKEGMNEEMSEVI 707

Query: 281 DDMAIEGCSPDIVTYNS-LVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
            D  +  C  +       LV  + K+G  +  + V+ ++   G+ PNS
Sbjct: 708 GD-TLRSCRLNEAELAKVLVEINHKEGNMEAVLNVLTDMAKDGLLPNS 754


>gi|224130786|ref|XP_002328376.1| predicted protein [Populus trichocarpa]
 gi|222838091|gb|EEE76456.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 137/473 (28%), Positives = 256/473 (54%), Gaps = 22/473 (4%)

Query: 95  TITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHF 154
           T TKK    SLP ++G F+ N+  + +  L +F               M R N  P    
Sbjct: 51  TCTKKR---SLPQNNGGFLSNNSISIDDALASFYR-------------MLRMNPRPS--- 91

Query: 155 CINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD 211
            +   R L  I + ++ S V+ +   M + G   +  + N+++  LC+   +  AI++L 
Sbjct: 92  VVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNILINCLCRLNHVVFAISVLG 151

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           +M   G +PD IT+NT++      G+ K+A+G + + +R+G  P +I+Y+ +I  +CK  
Sbjct: 152 KMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSG 211

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
             + A+++L  M  +GC P++V Y ++++  CK    +DA+ +++ ++ RG+ P+ +TY+
Sbjct: 212 NTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYS 271

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           T+LH   S G  +    + + M   +  P   T+ IL++GLCK G+V  A   F  M  K
Sbjct: 272 TILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKK 331

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
             +P+  TYN ++   C    ++EA ++L ++    C+P + +YN LI+G  K+  +++A
Sbjct: 332 GAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEA 391

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             L  +M E  ++PD +T+ TL+ G C+  + +EA++L KE+   G       Y  ++ G
Sbjct: 392 KSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDG 451

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           LCK   +D A+++L+ M  S+ +PD  +++ +++ +   G  E A +L+ KL 
Sbjct: 452 LCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLF 504



 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 227/432 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++   C  G++ +A  L + M RR   PD      +I GL +      A 
Sbjct: 158 IQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMAL 217

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L+ M   G  P+ + Y  ++  LCK   +  A+ LL EM   G  PDV+TY+TIL   
Sbjct: 218 QLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGF 277

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A   + + + +   P  +T+TIL++ +CK+  ++ A  V + M  +G  P+ 
Sbjct: 278 CSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVFEAMTKKGAEPNA 337

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN+L++  C   + D+A  V++ ++ +G  P   +YN L++    R   D    +L  
Sbjct: 338 YTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAKSLLVE 397

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+E   +P   TY+ L+ GLC+ G    A+N F +M S    PD++TY+T+L  LCK G 
Sbjct: 398 MSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGH 457

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EAL+LL  +  S   P ++ YN LI+G+   G +E A  L+ ++  +GI P   T+  
Sbjct: 458 LDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTI 517

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G  +    +EA +L +++   G    + +Y ++I G  +++    AI++++ M+  R
Sbjct: 518 MIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKR 577

Query: 533 YKPDDTVFSTIV 544
           +  D + F  ++
Sbjct: 578 FSADSSTFQMLL 589



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 157/325 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + IL  FCS G L +A+ L + M  RN +P+      L+ GL +   + +A  V 
Sbjct: 266 DVVTYSTILHGFCSLGHLNEATILFNEMVGRNVMPNTVTFTILVDGLCKEGMVSEARCVF 325

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  P+  TYN ++ G C   Q+  A  +LD M   GC P V +YN ++      
Sbjct: 326 EAMTKKGAEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKR 385

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A     +   K   P  +TY+ L++ +C+      A+ +  +M   G  PD++TY
Sbjct: 386 RRLDEAKSLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTY 445

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  CK G  D+A+ ++ ++    +EP+ + YN L+  +   G  +   ++   +  
Sbjct: 446 STLLDGLCKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFA 505

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               PT+ TY I+I GL K GL D A   F +M      P+  +YN ++    +    + 
Sbjct: 506 DGIQPTIRTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSST 565

Query: 416 ALQLLHLLNGSSCSPCLITYNTLID 440
           A++L+  + G   S    T+  L+D
Sbjct: 566 AIRLIDEMVGKRFSADSSTFQMLLD 590



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 124/258 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            E +  T N ++  +C   ++ +A K++DIM  +   P  H    LI G  +  R+++A 
Sbjct: 333 AEPNAYTYNALMDGYCLNNQMDEAQKVLDIMVDKGCAPVVHSYNILINGYCKRRRLDEAK 392

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  M      PDT+TY+ ++ GLC+ G+ + A+ L  EM  SG  PD++TY+T+L  +
Sbjct: 393 SLLVEMSEKELTPDTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGL 452

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G   +A+   K        P ++ Y ILIE +     +  A E+   +  +G  P I
Sbjct: 453 CKHGHLDEALKLLKSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTI 512

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY  ++    K+G  D+A  +   +   G  PNS +YN ++             +++D 
Sbjct: 513 RTYTIMIKGLLKEGLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDE 572

Query: 353 MNEASHSPTVFTYNILIN 370
           M     S    T+ +L++
Sbjct: 573 MVGKRFSADSSTFQMLLD 590



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/188 (30%), Positives = 104/188 (55%)

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +D A+ SF +M+  N +P +V +   LG++ K+   +  + L + ++    +  + + N 
Sbjct: 73  IDDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNI 132

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+ L +   +  A+ + G+M + GI PD IT  TLI G C   +++EAV L  E+ +RG
Sbjct: 133 LINCLCRLNHVVFAISVLGKMFKLGIQPDAITFNTLINGRCIEGEIKEAVGLFNEMVRRG 192

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           ++    +Y  VI+GLCKS    MA+Q+L  M     KP+   ++TI+  +  D +  +A 
Sbjct: 193 HQPDVISYSTVINGLCKSGNTSMALQLLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAM 252

Query: 558 KLWQKLIE 565
            L  ++++
Sbjct: 253 DLLSEMVD 260



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 69/267 (25%), Positives = 118/267 (44%), Gaps = 35/267 (13%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           DDA+     +L     P+ + +   L S+  +  +  V  + + M+    +  V++ NIL
Sbjct: 74  DDALASFYRMLRMNPRPSVVEFGRFLGSIAKKKQYSTVVSLCNQMDLFGVTHNVYSLNIL 133

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN LC+   V  AI+   +M     QPD                                
Sbjct: 134 INCLCRLNHVVFAISVLGKMFKLGIQPDA------------------------------- 162

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
               IT+NTLI+G   +G +++A+ L+ +M+  G  PD I++ T+I G C++     A+ 
Sbjct: 163 ----ITFNTLINGRCIEGEIKEAVGLFNEMVRRGHQPDVISYSTVINGLCKSGNTSMALQ 218

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           LL+++ ++G K    AY  +I  LCK   V+ A+ +L  M+     PD   +STI+    
Sbjct: 219 LLRKMEEKGCKPNLVAYTTIIDSLCKDTLVNDAMDLLSEMVDRGIPPDVVTYSTILHGFC 278

Query: 549 DDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             G   EA  L+ +++   V     T 
Sbjct: 279 SLGHLNEATILFNEMVGRNVMPNTVTF 305



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 44/189 (23%), Positives = 89/189 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++Q  C  G+  +A  L   M     +PD      L+ GL +   +++A K+L
Sbjct: 406 DTVTYSTLMQGLCQVGRPQEALNLFKEMCSSGLLPDLMTYSTLLDGLCKHGHLDEALKLL 465

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  S   PD + YN+++ G+   G++  A  L  ++   G +P + TY  +++ +   
Sbjct: 466 KSMQESKIEPDIVLYNILIEGMFIAGKLEVAKELFSKLFADGIQPTIRTYTIMIKGLLKE 525

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   ++     G  P   +Y ++I+   +    + AI ++D+M  +  S D  T+
Sbjct: 526 GLSDEAYELFRKMEDDGFLPNSCSYNVIIQGFLQNQDSSTAIRLIDEMVGKRFSADSSTF 585

Query: 296 NSLVNFSCK 304
             L++   +
Sbjct: 586 QMLLDLESR 594


>gi|224086515|ref|XP_002307901.1| predicted protein [Populus trichocarpa]
 gi|222853877|gb|EEE91424.1| predicted protein [Populus trichocarpa]
          Length = 724

 Score =  236 bits (602), Expect = 2e-59,   Method: Compositional matrix adjust.
 Identities = 135/440 (30%), Positives = 248/440 (56%), Gaps = 11/440 (2%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
           R ++ +A KL++ M      PD +    +I G  R++R+ + +K++  M++ G  P+ +T
Sbjct: 258 RDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMT 317

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y  ++ GLCK  +I  A ALL +  V G  P+V+ +NT++     NG+  +A  F  D++
Sbjct: 318 YGYLMHGLCKTCRIDEAQALLSK--VPG--PNVVHFNTLVNGFVRNGRLNEATAFVYDKM 373

Query: 250 -RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
              G  P + T++ L+  +CK+     A+E+++DM  +GC P++ TY  L++  CK+G+ 
Sbjct: 374 INNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQL 433

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTY 365
           ++A L++  +L++G   N++ YN L+ +L   G    + + LD+  E S     P +FT+
Sbjct: 434 EEAGLILREMLTKGFSLNTVGYNALISALCKHG---KIHEALDMFGEMSSKGCKPDIFTF 490

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N LI GLC+   ++ A+  +  MV +    + VT+NT++ A  + G + EAL+L++ +  
Sbjct: 491 NSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLF 550

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
             C    ITYN LI  L K G +EK + L+ +M+  G++P  IT   LI GFC A +V  
Sbjct: 551 RGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHN 610

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A++ ++++  RG       Y  +I+GLCK  ++  A+ + E + +   +PD   ++T++ 
Sbjct: 611 ALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLIC 670

Query: 546 KVADDGMTEEAYKLWQKLIE 565
            +  +G  ++A  L  + +E
Sbjct: 671 WLCREGAFDDACFLLYRGVE 690



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/404 (30%), Positives = 218/404 (53%), Gaps = 6/404 (1%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F  ND  T   ++   C   ++ +A  L+  +   N +   HF   L+ G +R  R+ +A
Sbjct: 311 FTPND-MTYGYLMHGLCKTCRIDEAQALLSKVPGPNVV---HFN-TLVNGFVRNGRLNEA 365

Query: 172 SK-VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           +  V   M+ +G VPD  T++ +V GLCK+G   SA+ L+++M   GC+P++ TY  ++ 
Sbjct: 366 TAFVYDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILID 425

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                G+ ++A    ++ L KG     + Y  LI  +CK   I  A+++  +M+ +GC P
Sbjct: 426 GFCKKGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKP 485

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           DI T+NSL+   C+  + +DA+ +  +++  G+  NS+T+NTL+H+   RG      K++
Sbjct: 486 DIFTFNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLV 545

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           + M          TYN LI  LCK G V++ +  F +M+ K   P I+T N ++   C  
Sbjct: 546 NDMLFRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTA 605

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G ++ AL+ +  +     SP ++TYN+LI+GL K+G +++A+ L+ ++   GI PD IT+
Sbjct: 606 GKVHNALEFMRDMIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITY 665

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            TLI   CR    ++A  LL    + G    +  + ++++   K
Sbjct: 666 NTLICWLCREGAFDDACFLLYRGVENGFVPNDVTWNILVYNFGK 709



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/426 (27%), Positives = 223/426 (52%), Gaps = 6/426 (1%)

Query: 141 DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           D++++     D+ F + +++ L  ++ ++ A  +L+ M   G VP+++ Y  ++  L KR
Sbjct: 200 DMLSKGVSPNDYTFGL-VMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKR 258

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
            ++  A+ LL+EM + GC PDV T+NT++       +  +        + KG  P  +TY
Sbjct: 259 DRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTY 318

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA-VLVINNLL 319
             L+  +CK C I  A  +L  +      P++V +N+LVN   + G+ ++A   V + ++
Sbjct: 319 GYLMHGLCKTCRIDEAQALLSKVP----GPNVVHFNTLVNGFVRNGRLNEATAFVYDKMI 374

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           + G  P+  T++TL++ L  +G + +  ++++ M+     P + TY ILI+G CK G ++
Sbjct: 375 NNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLE 434

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A     +M++K    + V YN ++ ALCK G ++EAL +   ++   C P + T+N+LI
Sbjct: 435 EAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLI 494

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
            GL +   ME A+ LY  M+  G+  + +T  TLI  F R  +++EA+ L+ ++  RG  
Sbjct: 495 FGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCP 554

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +    Y  +I  LCK+  V+  + + E MI     P     + ++      G    A + 
Sbjct: 555 LDEITYNGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAGKVHNALEF 614

Query: 560 WQKLIE 565
            + +I 
Sbjct: 615 MRDMIH 620



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 208/395 (52%), Gaps = 5/395 (1%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           AS V   M+  G  P+  T+ +++  LC   ++ +A  LL +M+  GC P+ + Y T++ 
Sbjct: 194 ASNVFYDMLSKGVSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLID 253

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +    +  +A+   ++    GCPP + T+  +I   C+   +    +++D M ++G +P
Sbjct: 254 ALSKRDRVDEALKLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTP 313

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW-DAVDKI 349
           + +TY  L++  CK  + D+A      LLS+   PN + +NTL++     G   +A   +
Sbjct: 314 NDMTYGYLMHGLCKTCRIDEA----QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFV 369

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            D M    + P VFT++ L+NGLCK GL   A+   N M +K C+P++ TY  ++   CK
Sbjct: 370 YDKMINNGYVPDVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCK 429

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +G L EA  +L  +     S   + YN LI  L K G + +A+ ++G+M   G  PD  T
Sbjct: 430 KGQLEEAGLILREMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFT 489

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             +LI+G CR D++E+A+ L +++   G    +  +  +IH   +  ++  A++++  M+
Sbjct: 490 FNSLIFGLCRVDEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDML 549

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                 D+  ++ ++K +   G  E+   L++++I
Sbjct: 550 FRGCPLDEITYNGLIKALCKTGAVEKGLGLFEEMI 584



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/346 (29%), Positives = 185/346 (53%), Gaps = 6/346 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++   C +G    A +L++ M  +   P+ +    LI G  +  ++E+A  +L
Sbjct: 381 DVFTFSTLVNGLCKKGLFGSALELVNDMDAKGCKPNLNTYTILIDGFCKKGQLEEAGLIL 440

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G   +T+ YN ++  LCK G+I  A+ +  EMS  GC+PD+ T+N+++  +   
Sbjct: 441 REMLTKGFSLNTVGYNALISALCKHGKIHEALDMFGEMSSKGCKPDIFTFNSLIFGLCRV 500

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + + A+  ++D + +G     +T+  LI    ++  I  A+++++DM   GC  D +TY
Sbjct: 501 DEMEDALALYRDMVLEGVIANSVTFNTLIHAFLRRGEIQEALKLVNDMLFRGCPLDEITY 560

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+   CK G  +  + +   ++ +G+ P+ IT N L++   + G    V   L+ M +
Sbjct: 561 NGLIKALCKTGAVEKGLGLFEEMIRKGLTPSIITCNILINGFCTAG---KVHNALEFMRD 617

Query: 356 ASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
             H   SP + TYN LINGLCK G +  A+N F ++ ++  QPD +TYNT++  LC+EG 
Sbjct: 618 MIHRGFSPDIVTYNSLINGLCKRGRIQEALNLFEKLQAEGIQPDSITYNTLICWLCREGA 677

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
            ++A  LL+    +   P  +T+N L+    K+   E   + Y Q 
Sbjct: 678 FDDACFLLYRGVENGFVPNDVTWNILVYNFGKQSNSEGQTITYAQF 723



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 154/323 (47%), Gaps = 19/323 (5%)

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL----VN 300
           W    +  C  + + Y +LI+++    G A   +V+D + ++     IV   SL    + 
Sbjct: 93  WAGAQKGYCHSFSVYY-LLIDKL----GAAAGFKVIDRLLLQMKEEGIVFRESLFILIMK 147

Query: 301 FSCKQGKYDDAVLVINNLLSRGM---EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +  + G    A  ++ ++  +G+   EP+  +YN +L  L    C      +   M    
Sbjct: 148 YYGRAGLPGQATRLLLDM--KGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKG 205

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP  +T+ +++  LC    VD A      M    C P+ + Y T++ AL K   ++EAL
Sbjct: 206 VSPNDYTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEAL 265

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL  +    C P + T+NT+I G  +   + +   L  +M+  G +P+D+T+  L+ G 
Sbjct: 266 KLLEEMFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGL 325

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ-VLELMISSRYKPD 536
           C+  +++EA  LL ++        N+    +++G  ++ +++ A   V + MI++ Y PD
Sbjct: 326 CKTCRIDEAQALLSKVPGPNVVHFNT----LVNGFVRNGRLNEATAFVYDKMINNGYVPD 381

Query: 537 DTVFSTIVKKVADDGMTEEAYKL 559
              FST+V  +   G+   A +L
Sbjct: 382 VFTFSTLVNGLCKKGLFGSALEL 404



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 66/221 (29%), Positives = 111/221 (50%), Gaps = 5/221 (2%)

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
           A   +LD+       P+  +YN++++ L        A N F  M+SK   P+  T+  V+
Sbjct: 158 ATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPNDYTFGLVM 217

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            ALC    ++ A  LL  +    C P  + Y TLID L+K+  +++A+ L  +M   G  
Sbjct: 218 KALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEEMFLMGCP 277

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD  T  T+I+GFCR ++V E   L+  +  +G    +  Y  ++HGLCK+ ++D A   
Sbjct: 278 PDVNTFNTVIYGFCRLNRVLEGAKLVDRMILKGFTPNDMTYGYLMHGLCKTCRIDEA--- 334

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL-WQKLI 564
            + ++S    P+   F+T+V     +G   EA    + K+I
Sbjct: 335 -QALLSKVPGPNVVHFNTLVNGFVRNGRLNEATAFVYDKMI 374



 Score = 70.9 bits (172), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 44/157 (28%), Positives = 77/157 (49%), Gaps = 1/157 (0%)

Query: 409 KEGMLNEALQLLHLLNG-SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           + G+  +A +LL  + G   C P   +YN ++D L    C   A  ++  M+  G+SP+D
Sbjct: 151 RAGLPGQATRLLLDMKGVYCCEPSFRSYNVVLDVLVVGNCPSVASNVFYDMLSKGVSPND 210

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   ++   C  ++V+ A  LL+++ K G    +  Y+ +I  L K  +VD A+++LE 
Sbjct: 211 YTFGLVMKALCMVNEVDNACLLLRDMTKHGCVPNSMIYQTLIDALSKRDRVDEALKLLEE 270

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           M      PD   F+T++          E  KL  ++I
Sbjct: 271 MFLMGCPPDVNTFNTVIYGFCRLNRVLEGAKLVDRMI 307


>gi|15221515|ref|NP_176447.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213223|sp|Q9SXD8.1|PPR90_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62590
 gi|5454201|gb|AAD43616.1|AC005698_15 T3P18.15 [Arabidopsis thaliana]
 gi|332195860|gb|AEE33981.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 634

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 234/447 (52%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC R +++ A  L+  M +    P      +L+ G     RI  A  ++  M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PDTIT+  ++ GL    +   A+AL+D M   GC+P+++TY  ++  +   G  
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 241

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+              ++ +  +I+ +CK   +  A+ +  +M  +G  P++VTY+SL
Sbjct: 242 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 301

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  G++ DA  ++++++ + + PN +T+N L+ +    G +   +K+ D M + S 
Sbjct: 302 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +FTYN L+NG C +  +D+A   F  MVSK+C PD+VTYNT++   CK   + +  +
Sbjct: 362 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 421

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   ++        +TY TLI GL   G  + A  ++ QM+ +G+ PD +T+  L+ G C
Sbjct: 422 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 481

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              ++E+A+++   + K   K+    Y  +I G+CK+ KVD    +   +     KP+  
Sbjct: 482 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 541

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++T++  +    + +EAY L +K+ E
Sbjct: 542 TYNTMISGLCSKRLLQEAYALLKKMKE 568



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 235/457 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +L  +C   +++DA  L+D M      PD      LI GL   ++  +A  ++  M
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+ +TY ++V GLCKRG    A+ LL++M  +  E DV+ +NTI+ ++      
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 276

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+  +K+   KG  P ++TY+ LI  +C     + A ++L DM  +  +P++VT+N+L
Sbjct: 277 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 336

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK+ +A  + ++++ R ++P+  TYN+L++        D   ++ + M     
Sbjct: 337 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 396

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TYN LI G CK   V+     F +M  +    D VTY T++  L  +G  + A +
Sbjct: 397 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 456

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +      P ++TY+ L+DGL   G +EKA+ ++  M ++ I  D   + T+I G C
Sbjct: 457 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 516

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A +V++  DL   +  +G K     Y  +I GLC  + +  A  +L+ M      P+  
Sbjct: 517 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 576

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            ++T+++    DG    + +L +++   +     +T+
Sbjct: 577 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 613



 Score =  219 bits (557), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 223/443 (50%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           NK+L       K      L + M R   +   +    LI    R  +I  A  +L  M+ 
Sbjct: 89  NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 148

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  +T + ++ G C   +I  A+AL+D+M   G  PD IT+ T++  +F + K  +
Sbjct: 149 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 208

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+      +++GC P L+TY +++  +CK+     A+ +L+ M       D+V +N++++
Sbjct: 209 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 268

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK    DDA+ +   + ++G+ PN +TY++L+  L S G W    ++L  M E   +P
Sbjct: 269 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 328

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + T+N LI+   K G    A   ++ M+ ++  PDI TYN+++   C    L++A Q+ 
Sbjct: 329 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 388

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C P ++TYNTLI G  K   +E    L+ +M   G+  D +T+ TLI G    
Sbjct: 389 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 448

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
              + A  + K++   G       Y +++ GLC + K++ A++V + M  S  K D  ++
Sbjct: 449 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 508

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           +T+++ +   G  ++ + L+  L
Sbjct: 509 TTMIEGMCKAGKVDDGWDLFCSL 531



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 227/445 (51%), Gaps = 12/445 (2%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIM 178
           +IL+N     KL DA  L   M +   +P   +F+  ++ I  + + D +    + +Q +
Sbjct: 55  EILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 114

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +  G+    TYN+++   C+R QI  A+ALL +M   G EP ++T +++L       + 
Sbjct: 115 EIVHGL---YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 171

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+      +  G  P  IT+T LI  +      + A+ ++D M   GC P++VTY  +
Sbjct: 172 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 231

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  CK+G  D A+ ++N + +  +E + + +NT++ SL     +  VD  L++  E   
Sbjct: 232 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK---YRHVDDALNLFKEMET 288

Query: 359 S---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V TY+ LI+ LC YG    A    + M+ K   P++VT+N ++ A  KEG   E
Sbjct: 289 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 348

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +   S  P + TYN+L++G      ++KA  ++  M+     PD +T+ TLI 
Sbjct: 349 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 408

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GFC++ +VE+  +L +E+  RG       Y  +I GL      D A +V + M+S    P
Sbjct: 409 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 468

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLW 560
           D   +S ++  + ++G  E+A +++
Sbjct: 469 DIMTYSILLDGLCNNGKLEKALEVF 493



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 206/398 (51%)

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           +++ A  +   MV S  +P  + +N ++  + K  +    I+L ++M        + TYN
Sbjct: 65  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 124

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++       +   A+      ++ G  P ++T + L+   C    I+ A+ ++D M   
Sbjct: 125 ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 184

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G  PD +T+ +L++      K  +AV +++ ++ RG +PN +TY  +++ L  RG  D  
Sbjct: 185 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 244

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             +L+ M  A     V  +N +I+ LCKY  VD A+N F +M +K  +P++VTY++++  
Sbjct: 245 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 304

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LC  G  ++A QLL  +     +P L+T+N LID   K+G   +A  LY  M++  I PD
Sbjct: 305 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 364

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             T+ +L+ GFC  D++++A  + + +  +        Y  +I G CKSK+V+   ++  
Sbjct: 365 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 424

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            M       D   ++T+++ +  DG  + A K++++++
Sbjct: 425 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 462



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 161/334 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    N I+ + C    + DA  L   M  +   P+     +LI  L    R   AS
Sbjct: 256 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 315

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+     P+ +T+N ++    K G+   A  L D+M     +PD+ TYN+++   
Sbjct: 316 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 375

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   ++  + K C P ++TY  LI+  CK   +    E+  +M+  G   D 
Sbjct: 376 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 435

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY +L+      G  D+A  V   ++S G+ P+ +TY+ LL  L + G  +   ++ D 
Sbjct: 436 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 495

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M ++     ++ Y  +I G+CK G VD   + F  +  K  +P++VTYNT++  LC + +
Sbjct: 496 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 555

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           L EA  LL  +      P   TYNTLI    + G
Sbjct: 556 LQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 589



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 39/376 (10%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  ILR    + K   AIG +   ++    P ++ +  L+  + K       I + + M 
Sbjct: 53  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 112

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSRGC 342
                  + TYN L+N  C++ +   A+ ++  ++  G EP+ +T ++LL+    G R  
Sbjct: 113 RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-I 171

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            DAV  ++D M E  + P   T+  LI+GL  +     A+   ++MV + CQP++VTY  
Sbjct: 172 SDAV-ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           V+  LCK G  + AL LL+ +  +     ++ +NT+ID L K   ++ A+ L+ +M   G
Sbjct: 231 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 290

Query: 463 ISPDDITHRTLIWGFCR-----------ADQVE------------------------EAV 487
           I P+ +T+ +LI   C            +D +E                        EA 
Sbjct: 291 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 350

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L  ++ KR        Y  +++G C   ++D A Q+ E M+S    PD   ++T++K  
Sbjct: 351 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 410

Query: 548 ADDGMTEEAYKLWQKL 563
                 E+  +L++++
Sbjct: 411 CKSKRVEDGTELFREM 426



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 133/279 (47%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P IV +N L++   K  K+D  + +   +    +     TYN L++    R        +
Sbjct: 83  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 142

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L  M +  + P++ T + L+NG C    +  A+   +QMV    +PD +T+ T++  L  
Sbjct: 143 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 202

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
               +EA+ L+  +    C P L+TY  +++GL K+G  + A+ L  +M    I  D + 
Sbjct: 203 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 262

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             T+I   C+   V++A++L KE+  +G +     Y  +I  LC   +   A Q+L  MI
Sbjct: 263 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 322

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +  P+   F+ ++     +G   EA KL+  +I+  +
Sbjct: 323 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 361


>gi|363543233|ref|NP_001241831.1| uncharacterized protein LOC100857030 [Zea mays]
 gi|224033903|gb|ACN36027.1| unknown [Zea mays]
          Length = 655

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 143/531 (26%), Positives = 251/531 (47%), Gaps = 74/531 (13%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN--QIPDFHFCINLIRGLIRIDRIEK 170
           V  +  T   +++  C+RG++ DA  ++D M RR    IP  +  I  +    R      
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVI--LEAACRGGGFRS 175

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A +VL+ +   G   D    N+++  +C +G +  A+ LL ++   GCEPDV++YN +L+
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDEALHLLRDLPSFGCEPDVVSYNAVLK 235

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +    ++       ++ +R  CPP ++T+  LI  +C+     R  EVL  M   GC+P
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMVEHGCTP 295

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW------- 343
           DI  Y ++++  CK+G  + A  ++N + S G++PN + YNTLL  L S   W       
Sbjct: 296 DIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355

Query: 344 ----------------------------DAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
                                       D V ++L+ M E    P V TY  +ING CK 
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLERGCMPDVITYTTVINGFCKE 415

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTY----------------------------------- 400
           GL+D A+     M +  C+P+ ++Y                                   
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           NT++  LCK+G++ +A++LL  +  + CSP LI+Y+T+IDGL K G  ++A+ L   M+ 
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G+SP+ I + ++     R  ++ + + +   I     +     Y  VI  LCK  + + 
Sbjct: 536 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 595

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           AI+ L  M+SS   P+++ ++ +++ +A +G  +EA ++  +L       K
Sbjct: 596 AIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRK 646



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/478 (28%), Positives = 235/478 (49%), Gaps = 38/478 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G+L  A +L    A     P+ +    ++R L    RI  A  VL  M  
Sbjct: 94  NAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P    Y++++   C+ G  RSA+ +L+++   GC  DV   N +L  + D G   +
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDE 210

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +D    GC P +++Y  +++ +C         E++++M    C P+IVT+N+L++
Sbjct: 211 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLIS 270

Query: 301 F-----------------------------------SCKQGKYDDAVLVINNLLSRGMEP 325
           +                                    CK+G  + A  ++N + S G++P
Sbjct: 271 YLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLKP 330

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N + YNTLL  L S   W+  +++L  M +        T+NIL++  C+ GLVDR I   
Sbjct: 331 NVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELL 390

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            QM+ + C PD++TY TV+   CKEG+++EA+ LL  +    C P  I+Y  ++ GL   
Sbjct: 391 EQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSA 450

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
                A  L  QM++ G   + IT  TLI   C+   VE+A++LLK++   G      +Y
Sbjct: 451 ERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISY 510

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             VI GL K+ K D A+++L +M++    P+  ++S+I   ++ +G   +  +++  +
Sbjct: 511 STVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 122/410 (29%), Positives = 205/410 (50%), Gaps = 38/410 (9%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           YN MV G C+ GQ+ SA  L   + V    P+  TY  ++R +   G+   A+    +  
Sbjct: 93  YNAMVAGYCRAGQLESARRLAAAVPVP---PNAYTYFPVVRALCARGRIADALAVLDEMP 149

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R+GC P    Y +++E  C+  G   A+ VL+D+   GC+ D+   N ++N  C QG  D
Sbjct: 150 RRGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVD 209

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A+ ++ +L S G EP+ ++YN +L  L     W  V ++++ M   +  P + T+N LI
Sbjct: 210 EALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLI 269

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           + LC+ GL +R      QMV   C PDI  Y T++  +CKEG L  A ++L+ +      
Sbjct: 270 SYLCRNGLFERVHEVLAQMVEHGCTPDIRMYATIIDGICKEGHLEVAHEILNRMPSYGLK 329

Query: 430 PCLITYNTLIDGL-----------------------------------AKKGCMEKAMVL 454
           P ++ YNTL+ GL                                    + G +++ + L
Sbjct: 330 PNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIEL 389

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             QM+E G  PD IT+ T+I GFC+   ++EAV LLK +   G K    +Y +V+ GLC 
Sbjct: 390 LEQMLERGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCS 449

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +++   A  ++  MI      +   F+T++  +   G+ E+A +L ++++
Sbjct: 450 AERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 499


>gi|22531122|gb|AAM97065.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
 gi|62320656|dbj|BAD95323.1| putative membrane-associated salt-inducible protein [Arabidopsis
           thaliana]
          Length = 596

 Score =  236 bits (601), Expect = 3e-59,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 234/447 (52%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC R +++ A  L+  M +    P      +L+ G     RI  A  ++  M
Sbjct: 84  TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 143

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PDTIT+  ++ GL    +   A+AL+D M   GC+P+++TY  ++  +   G  
Sbjct: 144 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDT 203

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+              ++ +  +I+ +CK   +  A+ +  +M  +G  P++VTY+SL
Sbjct: 204 DLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 263

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  G++ DA  ++++++ + + PN +T+N L+ +    G +   +K+ D M + S 
Sbjct: 264 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 323

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +FTYN L+NG C +  +D+A   F  MVSK+C PD+VTYNT++   CK   + +  +
Sbjct: 324 DPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTE 383

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   ++        +TY TLI GL   G  + A  ++ QM+ +G+ PD +T+  L+ G C
Sbjct: 384 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 443

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              ++E+A+++   + K   K+    Y  +I G+CK+ KVD    +   +     KP+  
Sbjct: 444 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 503

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++T++  +    + +EAY L +K+ E
Sbjct: 504 TYNTMISGLCSKRLLQEAYALLKKMKE 530



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 235/457 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +L  +C   +++DA  L+D M      PD      LI GL   ++  +A  ++  M
Sbjct: 119 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 178

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+ +TY ++V GLCKRG    A+ LL++M  +  E DV+ +NTI+ ++      
Sbjct: 179 VQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 238

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+  +K+   KG  P ++TY+ LI  +C     + A ++L DM  +  +P++VT+N+L
Sbjct: 239 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 298

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK+ +A  + ++++ R ++P+  TYN+L++        D   ++ + M     
Sbjct: 299 IDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDC 358

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TYN LI G CK   V+     F +M  +    D VTY T++  L  +G  + A +
Sbjct: 359 FPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 418

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +      P ++TY+ L+DGL   G +EKA+ ++  M ++ I  D   + T+I G C
Sbjct: 419 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 478

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A +V++  DL   +  +G K     Y  +I GLC  + +  A  +L+ M      P+  
Sbjct: 479 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPNSG 538

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            ++T+++    DG    + +L +++   +     +T+
Sbjct: 539 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 575



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 223/443 (50%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           NK+L       K      L + M R   +   +    LI    R  +I  A  +L  M+ 
Sbjct: 51  NKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALALLGKMMK 110

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  +T + ++ G C   +I  A+AL+D+M   G  PD IT+ T++  +F + K  +
Sbjct: 111 LGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASE 170

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+      +++GC P L+TY +++  +CK+     A+ +L+ M       D+V +N++++
Sbjct: 171 AVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIID 230

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK    DDA+ +   + ++G+ PN +TY++L+  L S G W    ++L  M E   +P
Sbjct: 231 SLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINP 290

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + T+N LI+   K G    A   ++ M+ ++  PDI TYN+++   C    L++A Q+ 
Sbjct: 291 NLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMF 350

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C P ++TYNTLI G  K   +E    L+ +M   G+  D +T+ TLI G    
Sbjct: 351 EFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHD 410

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
              + A  + K++   G       Y +++ GLC + K++ A++V + M  S  K D  ++
Sbjct: 411 GDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIY 470

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           +T+++ +   G  ++ + L+  L
Sbjct: 471 TTMIEGMCKAGKVDDGWDLFCSL 493



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/445 (29%), Positives = 227/445 (51%), Gaps = 12/445 (2%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIM 178
           +IL+N     KL DA  L   M +   +P   +F+  ++ I  + + D +    + +Q +
Sbjct: 17  EILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRL 76

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +  G+    TYN+++   C+R QI  A+ALL +M   G EP ++T +++L       + 
Sbjct: 77  EIVHGL---YTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRI 133

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+      +  G  P  IT+T LI  +      + A+ ++D M   GC P++VTY  +
Sbjct: 134 SDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVV 193

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  CK+G  D A+ ++N + +  +E + + +NT++ SL     +  VD  L++  E   
Sbjct: 194 VNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCK---YRHVDDALNLFKEMET 250

Query: 359 S---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V TY+ LI+ LC YG    A    + M+ K   P++VT+N ++ A  KEG   E
Sbjct: 251 KGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVE 310

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +   S  P + TYN+L++G      ++KA  ++  M+     PD +T+ TLI 
Sbjct: 311 AEKLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIK 370

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GFC++ +VE+  +L +E+  RG       Y  +I GL      D A +V + M+S    P
Sbjct: 371 GFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPP 430

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLW 560
           D   +S ++  + ++G  E+A +++
Sbjct: 431 DIMTYSILLDGLCNNGKLEKALEVF 455



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/398 (26%), Positives = 206/398 (51%)

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           +++ A  +   MV S  +P  + +N ++  + K  +    I+L ++M        + TYN
Sbjct: 27  KLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYN 86

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++       +   A+      ++ G  P ++T + L+   C    I+ A+ ++D M   
Sbjct: 87  ILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEM 146

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G  PD +T+ +L++      K  +AV +++ ++ RG +PN +TY  +++ L  RG  D  
Sbjct: 147 GYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLA 206

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             +L+ M  A     V  +N +I+ LCKY  VD A+N F +M +K  +P++VTY++++  
Sbjct: 207 LNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISC 266

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LC  G  ++A QLL  +     +P L+T+N LID   K+G   +A  LY  M++  I PD
Sbjct: 267 LCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPD 326

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             T+ +L+ GFC  D++++A  + + +  +        Y  +I G CKSK+V+   ++  
Sbjct: 327 IFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFR 386

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            M       D   ++T+++ +  DG  + A K++++++
Sbjct: 387 EMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMV 424



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/334 (28%), Positives = 161/334 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    N I+ + C    + DA  L   M  +   P+     +LI  L    R   AS
Sbjct: 218 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 277

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+     P+ +T+N ++    K G+   A  L D+M     +PD+ TYN+++   
Sbjct: 278 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSIDPDIFTYNSLVNGF 337

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   ++  + K C P ++TY  LI+  CK   +    E+  +M+  G   D 
Sbjct: 338 CMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 397

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY +L+      G  D+A  V   ++S G+ P+ +TY+ LL  L + G  +   ++ D 
Sbjct: 398 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 457

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M ++     ++ Y  +I G+CK G VD   + F  +  K  +P++VTYNT++  LC + +
Sbjct: 458 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 517

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           L EA  LL  +      P   TYNTLI    + G
Sbjct: 518 LQEAYALLKKMKEDGPLPNSGTYNTLIRAHLRDG 551



 Score =  135 bits (340), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 96/376 (25%), Positives = 173/376 (46%), Gaps = 39/376 (10%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  ILR    + K   AIG +   ++    P ++ +  L+  + K       I + + M 
Sbjct: 15  YREILRNGLHDMKLDDAIGLFGGMVKSRPLPSIVEFNKLLSAIAKMKKFDVVISLGEKMQ 74

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSRGC 342
                  + TYN L+N  C++ +   A+ ++  ++  G EP+ +T ++LL+    G R  
Sbjct: 75  RLEIVHGLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-I 133

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            DAV  ++D M E  + P   T+  LI+GL  +     A+   ++MV + CQP++VTY  
Sbjct: 134 SDAV-ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 192

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           V+  LCK G  + AL LL+ +  +     ++ +NT+ID L K   ++ A+ L+ +M   G
Sbjct: 193 VVNGLCKRGDTDLALNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKG 252

Query: 463 ISPDDITHRTLIWGFCR-----------ADQVE------------------------EAV 487
           I P+ +T+ +LI   C            +D +E                        EA 
Sbjct: 253 IRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAE 312

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L  ++ KR        Y  +++G C   ++D A Q+ E M+S    PD   ++T++K  
Sbjct: 313 KLYDDMIKRSIDPDIFTYNSLVNGFCMHDRLDKAKQMFEFMVSKDCFPDVVTYNTLIKGF 372

Query: 548 ADDGMTEEAYKLWQKL 563
                 E+  +L++++
Sbjct: 373 CKSKRVEDGTELFREM 388



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 73/279 (26%), Positives = 133/279 (47%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P IV +N L++   K  K+D  + +   +    +     TYN L++    R        +
Sbjct: 45  PSIVEFNKLLSAIAKMKKFDVVISLGEKMQRLEIVHGLYTYNILINCFCRRSQISLALAL 104

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L  M +  + P++ T + L+NG C    +  A+   +QMV    +PD +T+ T++  L  
Sbjct: 105 LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 164

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
               +EA+ L+  +    C P L+TY  +++GL K+G  + A+ L  +M    I  D + 
Sbjct: 165 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDTDLALNLLNKMEAAKIEADVVI 224

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             T+I   C+   V++A++L KE+  +G +     Y  +I  LC   +   A Q+L  MI
Sbjct: 225 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 284

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +  P+   F+ ++     +G   EA KL+  +I+  +
Sbjct: 285 EKKINPNLVTFNALIDAFVKEGKFVEAEKLYDDMIKRSI 323


>gi|226528493|ref|NP_001147073.1| ATP binding protein [Zea mays]
 gi|195607078|gb|ACG25369.1| ATP binding protein [Zea mays]
          Length = 655

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 142/531 (26%), Positives = 254/531 (47%), Gaps = 74/531 (13%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN--QIPDFHFCINLIRGLIRIDRIEK 170
           V  +  T   +++  C+RG++ DA  ++D M RR    IP  +  I  +    R      
Sbjct: 118 VPPNAYTYFPVVRALCARGRIADALAVLDEMPRRGCAPIPPMYHVI--LEAACRGGGFRS 175

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A +VL+ +   G   D    N+++  +C +G +  A+ LL ++   GCEPDV++YN +L+
Sbjct: 176 AVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKALHLLRDLPSFGCEPDVVSYNAVLK 235

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +    ++       ++ +R  CPP ++T+  LI  +C+     R  EVL  MA  GC+P
Sbjct: 236 GLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYLCRNGLFERVHEVLAQMAEHGCTP 295

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA----- 345
           DI  Y ++++  CK+G    A  ++N + S G++PN + YNTLL  L S   W+      
Sbjct: 296 DIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNVVCYNTLLKGLCSAERWEETEELL 355

Query: 346 ---------------------------VDKILDIMNEA-SHS--PTVFTYNILINGLCKY 375
                                      VD++++++ +   H   P V TY  +ING CK 
Sbjct: 356 AEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLVHGCMPDVITYTTVINGFCKE 415

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTY----------------------------------- 400
           GL+D A+     M +  C+P+ ++Y                                   
Sbjct: 416 GLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAERWVDAEDLMSQMIQQGCPLNPITF 475

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           NT++  LCK+G++ +A++LL  +  + CSP LI+Y+T+IDGL K G  ++A+ L   M+ 
Sbjct: 476 NTLINFLCKKGLVEQAIELLKQMLVNGCSPDLISYSTVIDGLGKAGKTDEALELLNVMVN 535

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G+SP+ I + ++     R  ++ + + +   I     +     Y  VI  LCK  + + 
Sbjct: 536 KGMSPNTIIYSSIASALSREGRINKVIQMFDNIQDTTIRSDAVLYNAVISSLCKRGETER 595

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           AI+ L  M+SS   P+++ ++ +++ +A +G  +EA ++  +L       K
Sbjct: 596 AIEFLAYMVSSGCVPNESTYTILIRGLASEGFVKEAQEMLTELCSKGALRK 646



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 238/480 (49%), Gaps = 42/480 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G+L  A +L    A     P+ +    ++R L    RI  A  VL  M  
Sbjct: 94  NAMVAGYCRAGQLESARRL---AAAVPVPPNAYTYFPVVRALCARGRIADALAVLDEMPR 150

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P    Y++++   C+ G  RSA+ +L+++   GC  DV   N +L  + D G   +
Sbjct: 151 RGCAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDK 210

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVC--KQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           A+   +D    GC P +++Y  +++ +C  K+ G  +  E++++M    C P+IVT+N+L
Sbjct: 211 ALHLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQ--ELMEEMVRMACPPNIVTFNTL 268

Query: 299 VNFSCKQGKYDD-----------------------------------AVLVINNLLSRGM 323
           +++ C+ G ++                                    A  ++N + S G+
Sbjct: 269 ISYLCRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGL 328

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           +PN + YNTLL  L S   W+  +++L  M +        T+NIL++  C+ GLVDR I 
Sbjct: 329 KPNVVCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIE 388

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              QM+   C PD++TY TV+   CKEG+++EA+ LL  +    C P  I+Y  ++ GL 
Sbjct: 389 LLEQMLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLC 448

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
                  A  L  QM++ G   + IT  TLI   C+   VE+A++LLK++   G      
Sbjct: 449 SAERWVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQMLVNGCSPDLI 508

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +Y  VI GL K+ K D A+++L +M++    P+  ++S+I   ++ +G   +  +++  +
Sbjct: 509 SYSTVIDGLGKAGKTDEALELLNVMVNKGMSPNTIIYSSIASALSREGRINKVIQMFDNI 568



 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 119/407 (29%), Positives = 214/407 (52%), Gaps = 3/407 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           ++ G  R  ++E A ++   + +    P+  TY  +V  LC RG+I  A+A+LDEM   G
Sbjct: 96  MVAGYCRAGQLESARRLAAAVPVP---PNAYTYFPVVRALCARGRIADALAVLDEMPRRG 152

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C P    Y+ IL      G F+ A+   +D   +GC   +    +++  +C Q  + +A+
Sbjct: 153 CAPIPPMYHVILEAACRGGGFRSAVRVLEDLHARGCALDVGNCNLVLNAICDQGSVDKAL 212

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L D+   GC PD+V+YN+++   C   ++     ++  ++     PN +T+NTL+  L
Sbjct: 213 HLLRDLPSFGCEPDVVSYNAVLKGLCMAKRWGCVQELMEEMVRMACPPNIVTFNTLISYL 272

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G ++ V ++L  M E   +P +  Y  +I+G+CK G +  A    N+M S   +P++
Sbjct: 273 CRNGLFERVHEVLAQMAEHGCTPDIRMYATIIDGICKEGHLKVAHEILNRMPSYGLKPNV 332

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V YNT+L  LC      E  +LL  +    C    +T+N L+D   + G +++ + L  Q
Sbjct: 333 VCYNTLLKGLCSAERWEETEELLAEMFDKDCPLDDVTFNILVDFFCQNGLVDRVIELLEQ 392

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+ +G  PD IT+ T+I GFC+   ++EAV LLK +   G K    +Y +V+ GLC +++
Sbjct: 393 MLVHGCMPDVITYTTVINGFCKEGLIDEAVMLLKSMTACGCKPNTISYTIVLKGLCSAER 452

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              A  ++  MI      +   F+T++  +   G+ E+A +L ++++
Sbjct: 453 WVDAEDLMSQMIQQGCPLNPITFNTLINFLCKKGLVEQAIELLKQML 499


>gi|302822936|ref|XP_002993123.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
 gi|300139014|gb|EFJ05763.1| hypothetical protein SELMODRAFT_136561 [Selaginella moellendorffii]
          Length = 569

 Score =  235 bits (600), Expect = 4e-59,   Method: Compositional matrix adjust.
 Identities = 137/460 (29%), Positives = 248/460 (53%), Gaps = 12/460 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N IL   C     T A  L D MA    +    +  NLI  L +   +++A  +L  M  
Sbjct: 50  NTILAELCDARDTTTAMALFDKMAELGAVNHTTY-YNLIHPLCKARLLDEAMGLLLDMKS 108

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P T+ +N+++GGLC+ G++R A+ +  +M+     PD +TY  ++  +   G+ + 
Sbjct: 109 RGMNPGTLLHNVVIGGLCRAGRLRHALGVYRQMN-DAHPPDFLTYTKLVHGLSKAGRLRD 167

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   ++ +     P   T T++++ +C    +  A E++++M   G + + +TY++LV+
Sbjct: 168 AVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVD 227

Query: 301 FSCKQGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASH 358
             CK  + D+AV L++  +  RG  P+ +TY+T++  L   G   DAVD    I  E S 
Sbjct: 228 GLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVD----IFEEMSC 283

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +PT  TYN LI G C+ G +D AI    +MV  NC PD++TY T++ A CK G L++A +
Sbjct: 284 APTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYE 343

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +  +  SP ++T+ +L+DGL  +G ME A+ L  ++   G  P   T+  ++ G+C
Sbjct: 344 LFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYC 403

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +++QV +A +L+ +   RG       Y +++ G C++ + D A+Q L+  ++S   P  T
Sbjct: 404 KSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLD-QLNSEGGPCPT 462

Query: 539 ---VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
              +++ I+  +  DG T++A + ++++I+        T 
Sbjct: 463 SVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATF 502



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 116/409 (28%), Positives = 215/409 (52%), Gaps = 6/409 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T  K++      G+L DA +++  M     +PD      +++ L   DR++ A +++
Sbjct: 148 DFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHVPDNTTLTVVVQSLCLGDRVDDARELV 207

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA-LLDEMSVSGCEPDVITYNTILRTMFD 234
           + M+  G   + ITY+ +V GLCK  ++  A+A LL E++  G  PD++TY+T++  +  
Sbjct: 208 EEMLHRGMAANAITYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCK 267

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+ + A+  +++     C P  ITY  LI   C+   +  AI +L  M  + C+PD++T
Sbjct: 268 AGRLRDAVDIFEEM---SCAPTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVIT 324

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +L++  CK G+ DDA  +   +++  + P+ +T+ +L+  L   G  +   ++L+ + 
Sbjct: 325 YTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEIT 384

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                PT++TYN +++G CK   V +A        S+   P+ VTYN ++   C+ G  +
Sbjct: 385 RRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTD 444

Query: 415 EALQLLHLLN--GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +ALQ L  LN  G  C   +  Y  ++D L + G  + A+  Y +M++ G  P   T  T
Sbjct: 445 QALQYLDQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFAT 504

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           +++  C+A Q ++A +LL+E+ K G+         V+   C++  +  A
Sbjct: 505 VVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKA 553



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 173/343 (50%), Gaps = 6/343 (1%)

Query: 119 TNNKILQNFCSRGKLTDA-SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T + ++   C   +L +A + L+  + RR   PD      +I GL +  R+  A  + + 
Sbjct: 221 TYSALVDGLCKCERLDEAVALLLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEE 280

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  +   P  ITYN ++GG C+ G +  AI LL +M    C PDVITY T++      G+
Sbjct: 281 MSCA---PTAITYNSLIGGYCRAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGR 337

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A   ++  +     P ++T+T L++ +C +  +  A+E+L+++   GC P I TYN 
Sbjct: 338 LDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNC 397

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN-EA 356
           +V+  CK  +   A  ++ +  SRG  PN++TYN L+      G  D   + LD +N E 
Sbjct: 398 VVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEG 457

Query: 357 SHSPT-VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              PT V  Y I+++ LC+ G  D A+  + +M+ +   P   T+ TV+ ALCK     +
Sbjct: 458 GPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQ 517

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           A +LL  +     +P   T + ++    + G ++KA  L  ++
Sbjct: 518 AHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADELASEL 560



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 185/355 (52%), Gaps = 7/355 (1%)

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGCPPYLITYTILIEQVCKQCGIA 274
           +G   D  T+  +LR +  + K +       D++R +G  P  +    ++ ++C      
Sbjct: 4   AGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDARDTT 63

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+ + D MA  G + +  TY +L++  CK    D+A+ ++ ++ SRGM P ++ +N ++
Sbjct: 64  TAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHNVVI 122

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
             L   G       +   MN+A H P   TY  L++GL K G +  A+    +MVS    
Sbjct: 123 GGLCRAGRLRHALGVYRQMNDA-HPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSARHV 181

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM-V 453
           PD  T   V+ +LC    +++A +L+  +     +   ITY+ L+DGL K   +++A+ +
Sbjct: 182 PDNTTLTVVVQSLCLGDRVDDARELVEEMLHRGMAANAITYSALVDGLCKCERLDEAVAL 241

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L G++   G +PD +T+ T+I G C+A ++ +AVD+ +E+      +    Y  +I G C
Sbjct: 242 LLGEVTRRGFTPDIVTYSTVIDGLCKAGRLRDAVDIFEEMSCAPTAI---TYNSLIGGYC 298

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++  +D AI++L  M+     PD   ++T++      G  ++AY+L+Q+++  K+
Sbjct: 299 RAGDMDEAIRLLGKMVDDNCAPDVITYTTLMSAFCKMGRLDDAYELFQQMVANKL 353



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 62/237 (26%), Positives = 108/237 (45%), Gaps = 4/237 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  FC  G+L DA +L   M      PD     +L+ GL    R+E A ++L
Sbjct: 321 DVITYTTLMSAFCKMGRLDDAYELFQQMVANKLSPDVVTFTSLVDGLCGEGRMEDALELL 380

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + +   G  P   TYN +V G CK  Q+R A  L+ +    G  P+ +TYN ++      
Sbjct: 381 EEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELVADFRSRGFVPNTVTYNILVAGCCRA 440

Query: 236 GKFKQAIGFWKDQLRK---GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           G+  QA+ +  DQL      CP  +  Y I+++ +C+      A++  ++M   G  P  
Sbjct: 441 GRTDQALQYL-DQLNSEGGPCPTSVAMYAIILDALCRDGRTDDAVQFYEEMIQRGYVPAA 499

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            T+ ++V   CK  +   A  ++  ++  G  P   T + ++ +    G     D++
Sbjct: 500 ATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPGTCDAVVSAYCRAGMIQKADEL 556



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 48/189 (25%), Positives = 86/189 (45%), Gaps = 3/189 (1%)

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNE-ALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           M+      D  T+  VL  L     L      LL  +     SP  +  NT++  L    
Sbjct: 1   MLDAGYPSDSSTFAVVLRGLHASAKLRHLGPLLLDEIRDRGLSPDPVELNTILAELCDAR 60

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
               AM L+ +M E G + +  T+  LI   C+A  ++EA+ LL ++  RG       + 
Sbjct: 61  DTTTAMALFDKMAELG-AVNHTTYYNLIHPLCKARLLDEAMGLLLDMKSRGMNPGTLLHN 119

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           +VI GLC++ ++  A+ V   M +  + PD   ++ +V  ++  G   +A ++ Q+++  
Sbjct: 120 VVIGGLCRAGRLRHALGVYRQM-NDAHPPDFLTYTKLVHGLSKAGRLRDAVQVLQEMVSA 178

Query: 567 KVFEKGTTL 575
           +     TTL
Sbjct: 179 RHVPDNTTL 187



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/205 (20%), Positives = 84/205 (40%), Gaps = 37/205 (18%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G++ DA +L++ + RR   P  +    ++ G  + +++ KA +++
Sbjct: 356 DVVTFTSLVDGLCGEGRMEDALELLEEITRRGCPPTIYTYNCVVDGYCKSNQVRKAEELV 415

Query: 176 QIMVMSGGVPDTITYNMMVGG-------------------------------------LC 198
                 G VP+T+TYN++V G                                     LC
Sbjct: 416 ADFRSRGFVPNTVTYNILVAGCCRAGRTDQALQYLDQLNSEGGPCPTSVAMYAIILDALC 475

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           + G+   A+   +EM   G  P   T+ T++  +    + +QA    ++ ++ G  P   
Sbjct: 476 RDGRTDDAVQFYEEMIQRGYVPAAATFATVVFALCKAHQPQQAHELLEEMIKYGHTPGPG 535

Query: 259 TYTILIEQVCKQCGIARAIEVLDDM 283
           T   ++   C+   I +A E+  ++
Sbjct: 536 TCDAVVSAYCRAGMIQKADELASEL 560


>gi|414883768|tpg|DAA59782.1| TPA: hypothetical protein ZEAMMB73_461975 [Zea mays]
          Length = 683

 Score =  235 bits (600), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 139/471 (29%), Positives = 239/471 (50%), Gaps = 31/471 (6%)

Query: 125 QNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV 184
           +  C  G+  DA  L+  MAR   +PD      +I  L+    + +A+ +L  M++ G  
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY------------------- 225
            D  T+N +V GLC  G++R A  L+D M   GC P V+TY                   
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 226 ------------NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
                       NT++R     GK  +A   ++    KGCPP + TY+IL+  +CK    
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A+ +LD+M  +GC+P+IVTY++L++  C+ G +DDA  +++ +L++G   NS  YN +
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +++L   G  D   +++  M      P + TYN +I  LC   L++ A + F  ++ +  
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGV 484

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
             + +TYNT++ AL + G   E L+L   +    C   +I+YN LI  L K+G ++++M 
Sbjct: 485 VANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMA 544

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L  +M+  GI P++ ++  LI   C+A +V +A++L KE+  +G       Y  +I+GLC
Sbjct: 545 LLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 604

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           K      A+ +LE + +    PD   ++ ++       + ++A  L  K I
Sbjct: 605 KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAI 655



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 221/444 (49%), Gaps = 8/444 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C  G++ +A++L+D M  +  +P       L++GL R  + ++A  +L
Sbjct: 246 DVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAML 305

Query: 176 QIMVMSGGVPDT--ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
                 G +P+   +  N ++ G    G++  A  L + M   GC PDV TY+ ++  + 
Sbjct: 306 ------GRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLC 359

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+F  A+    +   KGC P ++TY+ L+   C+      A  +LD M  +G S +  
Sbjct: 360 KLGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQ 419

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            YN ++   CK GK D A  ++  + S+G +P+  TYNT+++ L +    +  + I   +
Sbjct: 420 GYNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNL 479

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E        TYN LI+ L + G     +   ++M+   CQ D+++YN ++ ALCKEG +
Sbjct: 480 IEEGVVANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNV 539

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + ++ LL  +      P   +YN LI+ L K G +  A+ L  +M+  G++PD +T+ TL
Sbjct: 540 DRSMALLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 599

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+      A++LL+++           Y ++I   CK + +D A  +L+  IS   
Sbjct: 600 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDAAMLLDKAISGGI 659

Query: 534 KPDDTVFSTIVKKVADDGMTEEAY 557
            P++  +  +V+      +  E Y
Sbjct: 660 VPNERTWGMMVQNFVRQTVNLEGY 683



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 226/461 (49%), Gaps = 32/461 (6%)

Query: 136 ASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           A  L+D M RR  + P F     ++  L R D    A  + + M+     P T T+ +  
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
             LC+ G+   A+ALL  M+  GC PD + Y T++  +   G   +A     + L  GC 
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA--- 311
             + T+  L+  +C    +  A  ++D M  +GC P +VTY  L+   C+  + D+A   
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEACAM 304

Query: 312 --------VLVINNLL--------------------SRGMEPNSITYNTLLHSLGSRGCW 343
                   V+++N ++                    S+G  P+  TY+ L+H L   G +
Sbjct: 305 LGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCKLGRF 364

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
            +  ++LD M E   +P + TY+ L++  C+ G+ D A    +QM++K    +   YN +
Sbjct: 365 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQGYNGI 424

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + ALCK+G L++A +L+  +    C P + TYNT+I  L     ME+A  ++  ++E G+
Sbjct: 425 IYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLIEEGV 484

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
             + IT+ TLI    R  + +E + L  E+   G ++   +Y  +I  LCK   VD ++ 
Sbjct: 485 VANGITYNTLIHALLRNGRWQEGLRLASEMLLHGCQLDVISYNGLIKALCKEGNVDRSMA 544

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +LE M++   KP++  ++ ++ ++   G   +A +L ++++
Sbjct: 545 LLEEMVTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 585



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/370 (28%), Positives = 184/370 (49%), Gaps = 5/370 (1%)

Query: 206 AIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           A+ LLD+M       P   +YN +L T+        A+  ++  LR   PP   T+ +  
Sbjct: 125 ALHLLDQMPRRFAVSPSFRSYNVVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 184

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             +C+      A+ +L  MA  GC PD V Y ++++    QG   +A ++++ +L  G  
Sbjct: 185 RALCRLGRAGDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAAMLLDEMLLMGCA 244

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            +  T+N L+  L   G      +++D M      P+V TY  L+ GLC+    D A   
Sbjct: 245 ADVNTFNDLVLGLCGLGRVREAARLVDRMMTQGCMPSVVTYGFLLQGLCRTRQADEAC-- 302

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
              M+ +  + ++V  NTV+     EG L  A +L  ++    C P + TY+ L+ GL K
Sbjct: 303 --AMLGRLPEVNVVMLNTVIRGCLTEGKLARATELYEMMGSKGCPPDVHTYSILMHGLCK 360

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G    A+ +  +M E G +P+ +T+ TL+  FCR    ++A  +L ++  +G  M +  
Sbjct: 361 LGRFGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMLAKGFSMNSQG 420

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I+ LCK  K+D A ++++ M S   KPD   ++T++  + ++ + EEA  +++ LI
Sbjct: 421 YNGIIYALCKDGKLDQATRLVQEMKSQGCKPDICTYNTMIYHLCNNDLMEEAEHIFRNLI 480

Query: 565 EWKVFEKGTT 574
           E  V   G T
Sbjct: 481 EEGVVANGIT 490


>gi|18407744|ref|NP_564809.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169913|sp|Q9CAM8.1|PP100_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63150
 gi|12323259|gb|AAG51611.1|AC010795_15 unknown protein; 70626-72515 [Arabidopsis thaliana]
 gi|15810427|gb|AAL07101.1| unknown protein [Arabidopsis thaliana]
 gi|24030501|gb|AAN41397.1| unknown protein [Arabidopsis thaliana]
 gi|332195941|gb|AEE34062.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 629

 Score =  235 bits (599), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 235/453 (51%), Gaps = 3/453 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  T +  +  FC R +L+ A  ++  M +    PD     +L+ G     RI  A 
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PDT T+  ++ GL    +   A+AL+D+M   GC+PD++TY T++  +
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+              ++ +  +I+ +CK   +  A+++  +M  +G  P++
Sbjct: 234 CKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNV 293

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYNSL+N  C  G++ DA  +++N+L + + PN +T+N L+ +    G     +K+ + 
Sbjct: 294 VTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEE 353

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M + S  P   TYN+LING C +  +D A   F  MVSK+C P+I TYNT++   CK   
Sbjct: 354 MIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKR 413

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + + ++L   ++        +TY T+I G  + G  + A +++ QM+ N +  D +T+  
Sbjct: 414 VEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSI 473

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C   +++ A+ + K + K   ++    Y  +I G+CK+ KV    +  +L  S  
Sbjct: 474 LLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTMIEGMCKAGKVG---EAWDLFCSLS 530

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KPD   ++T++  +    + +EA  L++K+ E
Sbjct: 531 IKPDVVTYNTMISGLCSKRLLQEADDLFRKMKE 563



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/433 (29%), Positives = 216/433 (49%), Gaps = 2/433 (0%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           K+ DA  L   M +    P       L+  + ++++ E    + + M   G   D  TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           + +   C+R Q+  A+A+L +M   G EPD++T +++L     + +   A+      +  
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P   T+T LI  +      + A+ ++D M   GC PD+VTY ++VN  CK+G  D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           + ++N + +  ++ N + +NT++ SL   R    AVD   + M      P V TYN LIN
Sbjct: 243 LNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTE-METKGIRPNVVTYNSLIN 301

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
            LC YG    A    + M+ K   P++VT+N ++ A  KEG L EA +L   +   S  P
Sbjct: 302 CLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSIDP 361

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             ITYN LI+G      +++A  ++  M+     P+  T+ TLI GFC+  +VE+ V+L 
Sbjct: 362 DTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVELF 421

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +E+ +RG       Y  +I G  ++   D A  V + M+S+R   D   +S ++  +   
Sbjct: 422 REMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSY 481

Query: 551 GMTEEAYKLWQKL 563
           G  + A  +++ L
Sbjct: 482 GKLDTALVIFKYL 494



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 230/479 (48%), Gaps = 39/479 (8%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + +L  +C   +++DA  L+D M      PD      LI GL   ++  +A  
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  PD +TY  +V GLCKRG I  A+ LL++M  +  + +V+ +NTI+ ++ 
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKMEAARIKANVVIFNTIIDSLC 269

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
                + A+  + +   KG  P ++TY  LI  +C     + A  +L +M  +  +P++V
Sbjct: 270 KYRHVEVAVDLFTEMETKGIRPNVVTYNSLINCLCNYGRWSDASRLLSNMLEKKINPNVV 329

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+N+L++   K+GK  +A  +   ++ R ++P++ITYN L++        D   ++   M
Sbjct: 330 TFNALIDAFFKEGKLVEAEKLHEEMIQRSIDPDTITYNLLINGFCMHNRLDEAKQMFKFM 389

Query: 354 NEASHSPTVFTYNILINGLCK----------------YGLV------------------- 378
                 P + TYN LING CK                 GLV                   
Sbjct: 390 VSKDCLPNIQTYNTLINGFCKCKRVEDGVELFREMSQRGLVGNTVTYTTIIQGFFQAGDC 449

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A   F QMVS     DI+TY+ +L  LC  G L+ AL +   L  S     +  YNT+
Sbjct: 450 DSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKYLQKSEMELNIFIYNTM 509

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I+G+ K G + +A  L+  +    I PD +T+ T+I G C    ++EA DL +++ + G 
Sbjct: 510 IEGMCKAGKVGEAWDLFCSL---SIKPDVVTYNTMISGLCSKRLLQEADDLFRKMKEDGT 566

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
              +  Y  +I    +      + ++++ M SS +  D +  S +V  +  DG  ++++
Sbjct: 567 LPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTIS-LVTNMLHDGRLDKSF 624



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 209/404 (51%)

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           I +++ A  +   MV S   P  + +N ++  + K  +    I+L ++M   G   D+ T
Sbjct: 61  IIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYT 120

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y+  +       +   A+      ++ G  P ++T + L+   C    I+ A+ ++D M 
Sbjct: 121 YSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMV 180

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             G  PD  T+ +L++      K  +AV +++ ++ RG +P+ +TY T+++ L  RG  D
Sbjct: 181 EMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDID 240

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +L+ M  A     V  +N +I+ LCKY  V+ A++ F +M +K  +P++VTYN+++
Sbjct: 241 LALNLLNKMEAARIKANVVIFNTIIDSLCKYRHVEVAVDLFTEMETKGIRPNVVTYNSLI 300

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LC  G  ++A +LL  +     +P ++T+N LID   K+G + +A  L+ +M++  I 
Sbjct: 301 NCLCNYGRWSDASRLLSNMLEKKINPNVVTFNALIDAFFKEGKLVEAEKLHEEMIQRSID 360

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD IT+  LI GFC  ++++EA  + K +  +        Y  +I+G CK K+V+  +++
Sbjct: 361 PDTITYNLLINGFCMHNRLDEAKQMFKFMVSKDCLPNIQTYNTLINGFCKCKRVEDGVEL 420

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              M       +   ++TI++     G  + A  ++++++  +V
Sbjct: 421 FREMSQRGLVGNTVTYTTIIQGFFQAGDCDSAQMVFKQMVSNRV 464



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 103/231 (44%), Gaps = 12/231 (5%)

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTY-NILINGLCKYGLVDRAINSFNQMVSKN 392
             +L   GCW           E S +     Y  IL N L     VD A++ F  MV   
Sbjct: 30  FFNLCGSGCW-----------ERSFASASGDYREILRNRLSDIIKVDDAVDLFGDMVKSR 78

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             P IV +N +L A+ K       + L   +     S  L TY+  I+   ++  +  A+
Sbjct: 79  PFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFINCFCRRSQLSLAL 138

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            +  +MM+ G  PD +T  +L+ G+C + ++ +AV L+ ++ + G K     +  +IHGL
Sbjct: 139 AVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGL 198

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
               K   A+ +++ M+    +PD   + T+V  +   G  + A  L  K+
Sbjct: 199 FLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALNLLNKM 249



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/203 (26%), Positives = 93/203 (45%), Gaps = 9/203 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   I+Q F   G   D+++++      N++P D      L+ GL    +++ A  + + 
Sbjct: 435 TYTTIIQGFFQAGD-CDSAQMVFKQMVSNRVPTDIMTYSILLHGLCSYGKLDTALVIFKY 493

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +  S    +   YN M+ G+CK G++  A  L   +S+   +PDV+TYNT++  +     
Sbjct: 494 LQKSEMELNIFIYNTMIEGMCKAGKVGEAWDLFCSLSI---KPDVVTYNTMISGLCSKRL 550

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A   ++     G  P   TY  LI    + C  A + E++ +M   G   D  T  S
Sbjct: 551 LQEADDLFRKMKEDGTLPNSGTYNTLIRANLRDCDRAASAELIKEMRSSGFVGDASTI-S 609

Query: 298 LVNFSCKQGKYDDAVLVINNLLS 320
           LV      G+ D + L   N+LS
Sbjct: 610 LVTNMLHDGRLDKSFL---NMLS 629


>gi|15221300|ref|NP_177597.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169839|sp|Q9CA58.1|PP120_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g74580
 gi|12324819|gb|AAG52381.1|AC011765_33 hypothetical protein; 77097-79388 [Arabidopsis thaliana]
 gi|332197491|gb|AEE35612.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 763

 Score =  234 bits (598), Expect = 7e-59,   Method: Compositional matrix adjust.
 Identities = 135/448 (30%), Positives = 234/448 (52%), Gaps = 1/448 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  +Q  C RG+L  A +++  +  +   PD     NLI GL +  + ++A   L  M
Sbjct: 253 TYNLFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKM 312

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD+ TYN ++ G CK G ++ A  ++ +   +G  PD  TY +++  +   G+ 
Sbjct: 313 VNEGLEPDSYTYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGET 372

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + + L KG  P +I Y  LI+ +  Q  I  A ++ ++M+ +G  P++ T+N L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNIL 432

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  CK G   DA  ++  ++S+G  P+  T+N L+H   ++   +   +ILD+M +   
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGV 492

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V+TYN L+NGLCK    +  + ++  MV K C P++ T+N +L +LC+   L+EAL 
Sbjct: 493 DPDVYTYNSLLNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALG 552

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGF 477
           LL  +   S +P  +T+ TLIDG  K G ++ A  L+ +M E   +S    T+  +I  F
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAF 612

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
                V  A  L +E+  R        YRL++ G CK+  V++  + L  M+ + + P  
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSL 672

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           T    ++  +  +    EA  +  ++++
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQ 700



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 125/410 (30%), Positives = 216/410 (52%), Gaps = 3/410 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+R L +   +++  K+L  ++  G +P+  TYN+ + GLC+RG++  A+ ++  +   G
Sbjct: 222 LLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLCQRGELDGAVRMVGCLIEQG 281

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +PDVITYN ++  +  N KF++A  +    + +G  P   TY  LI   CK   +  A 
Sbjct: 282 PKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAE 341

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            ++ D    G  PD  TY SL++  C +G+ + A+ + N  L +G++PN I YNTL+  L
Sbjct: 342 RIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            ++G      ++ + M+E    P V T+NIL+NGLCK G V  A      M+SK   PDI
Sbjct: 402 SNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            T+N ++     +  +  AL++L ++  +   P + TYN+L++GL K    E  M  Y  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKT 521

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+E G +P+  T   L+   CR  +++EA+ LL+E+  +        +  +I G CK+  
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 518 VDMAIQVLELMISSRYKPDDT--VFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +D A  +   M    YK   +   ++ I+    +      A KL+Q++++
Sbjct: 582 LDGAYTLFRKM-EEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVD 630



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/516 (25%), Positives = 244/516 (47%), Gaps = 71/516 (13%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           ++N+  +GK+ +A  + + M   +  P       ++  L+     ++A KV   M   G 
Sbjct: 83  MKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYMRMRDRGI 142

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI-------------------- 223
            PD  ++ + +   CK  +  +A+ LL+ MS  GCE +V+                    
Sbjct: 143 TPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKAEGYE 202

Query: 224 ---------------TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
                          T+N +LR +   G  K+        +++G  P L TY + I+ +C
Sbjct: 203 LFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNLFIQGLC 262

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           ++  +  A+ ++  +  +G  PD++TYN+L+   CK  K+ +A + +  +++ G+EP+S 
Sbjct: 263 QRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSY 322

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TYNTL+      G     ++I+         P  FTY  LI+GLC  G  +RA+  FN+ 
Sbjct: 323 TYNTLIAGYCKGGMVQLAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEA 382

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC- 447
           + K  +P+++ YNT++  L  +GM+ EA QL + ++     P + T+N L++GL K GC 
Sbjct: 383 LGKGIKPNVILYNTLIKGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCV 442

Query: 448 ----------------------------------MEKAMVLYGQMMENGISPDDITHRTL 473
                                             ME A+ +   M++NG+ PD  T+ +L
Sbjct: 443 SDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSL 502

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           + G C+  + E+ ++  K + ++G       + +++  LC+ +K+D A+ +LE M +   
Sbjct: 503 LNGLCKTSKFEDVMETYKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSV 562

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE-WKV 568
            PD   F T++     +G  + AY L++K+ E +KV
Sbjct: 563 NPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEAYKV 598



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/425 (28%), Positives = 213/425 (50%), Gaps = 7/425 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C   K  +A   +  M      PD +    LI G  +   ++ A +++
Sbjct: 285 DVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQLAERIV 344

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              V +G VPD  TY  ++ GLC  G+   A+AL +E    G +P+VI YNT+++ + + 
Sbjct: 345 GDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQ 404

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A     +   KG  P + T+ IL+  +CK   ++ A  ++  M  +G  PDI T+
Sbjct: 405 GMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++    Q K ++A+ +++ +L  G++P+  TYN+LL+ L     ++ V +    M E
Sbjct: 465 NILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMETYKTMVE 524

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P +FT+NIL+  LC+Y  +D A+    +M +K+  PD VT+ T++   CK G L+ 
Sbjct: 525 KGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584

Query: 416 ALQLLHLLNG----SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           A  L   +      SS +P   TYN +I    +K  +  A  L+ +M++  + PD  T+R
Sbjct: 585 AYTLFRKMEEAYKVSSSTP---TYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYR 641

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            ++ GFC+   V      L E+ + G     +    VI+ LC   +V  A  ++  M+  
Sbjct: 642 LMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQK 701

Query: 532 RYKPD 536
              P+
Sbjct: 702 GLVPE 706



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 122/424 (28%), Positives = 190/424 (44%), Gaps = 3/424 (0%)

Query: 77  EWSSESHVLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNKILQNFCSRGKLT 134
           E   +  V+  N  + GL    K  +    L       +E D  T N ++  +C  G + 
Sbjct: 279 EQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMVNEGLEPDSYTYNTLIAGYCKGGMVQ 338

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
            A +++        +PD     +LI GL       +A  +    +  G  P+ I YN ++
Sbjct: 339 LAERIVGDAVFNGFVPDQFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLI 398

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            GL  +G I  A  L +EMS  G  P+V T+N ++  +   G    A G  K  + KG  
Sbjct: 399 KGLSNQGMILEAAQLANEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYF 458

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P + T+ ILI     Q  +  A+E+LD M   G  PD+ TYNSL+N  CK  K++D +  
Sbjct: 459 PDIFTFNILIHGYSTQLKMENALEILDVMLDNGVDPDVYTYNSLLNGLCKTSKFEDVMET 518

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
              ++ +G  PN  T+N LL SL      D    +L+ M   S +P   T+  LI+G CK
Sbjct: 519 YKTMVEKGCAPNLFTFNILLESLCRYRKLDEALGLLEEMKNKSVNPDAVTFGTLIDGFCK 578

Query: 375 YGLVDRAINSFNQM-VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
            G +D A   F +M  +        TYN ++ A  ++  +  A +L   +      P   
Sbjct: 579 NGDLDGAYTLFRKMEEAYKVSSSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGY 638

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TY  ++DG  K G +        +MMENG  P   T   +I   C  D+V EA  ++  +
Sbjct: 639 TYRLMVDGFCKTGNVNLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRM 698

Query: 494 GKRG 497
            ++G
Sbjct: 699 VQKG 702



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 72/298 (24%), Positives = 143/298 (47%), Gaps = 14/298 (4%)

Query: 275 RAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYD--DAVLV-----INNLLSRGMEPN 326
           +A+E+ + M  E G    + TY S++      GK++  + VLV     + N +  G+   
Sbjct: 22  KALEMFNSMRKEVGFKHTLSTYRSVIEKLGYYGKFEAMEEVLVDMRENVGNHMLEGV--- 78

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
              Y   + + G +G       + + M+     PTVF+YN +++ L   G  D+A   + 
Sbjct: 79  ---YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSVLVDSGYFDQAHKVYM 135

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M  +   PD+ ++   + + CK    + AL+LL+ ++   C   ++ Y T++ G  ++ 
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCKTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
              +   L+G+M+ +G+S    T   L+   C+   V+E   LL ++ KRG       Y 
Sbjct: 196 FKAEGYELFGKMLASGVSLCLSTFNKLLRVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           L I GLC+  ++D A++++  +I    KPD   ++ ++  +  +   +EA     K++
Sbjct: 256 LFIQGLCQRGELDGAVRMVGCLIEQGPKPDVITYNNLIYGLCKNSKFQEAEVYLGKMV 313


>gi|359488009|ref|XP_003633686.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 579

 Score =  234 bits (598), Expect = 8e-59,   Method: Compositional matrix adjust.
 Identities = 143/510 (28%), Positives = 250/510 (49%), Gaps = 39/510 (7%)

Query: 95  TITKKSHDPSLPS----SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           +I K  H  +L S     D   +  +  T + ++ +FC   ++  A  ++  + +    P
Sbjct: 70  SIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQP 129

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D      LIRG+    +I +A  +   M+  G  PD +TY  ++ GLCK G   +AI LL
Sbjct: 130 DTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLL 189

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
             M    C+P+V  YNTI+ ++  + +  +A   + + + KG  P + TY  LI  +C  
Sbjct: 190 GSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNL 249

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           C       +L++M      PD+V++N++V+  CK+GK  +A  V++ ++ RG+EPN +TY
Sbjct: 250 CEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGVEPNVVTY 309

Query: 331 NTLL--HSLGS--------------RGCW----------------DAVDKILDIMNEASH 358
             L+  H L S              +GC                   +DK + +  E   
Sbjct: 310 TALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCR 369

Query: 359 S---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TY+ LI+GLC    +  AI  F++MV+ +  P++VTY  +L  LCK   L E
Sbjct: 370 QELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAE 429

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ LL  + GS+  P +   N  IDG+ + G +E A  L+  +   G+ PD  T+  +I 
Sbjct: 430 AMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMIN 489

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G CR   ++EA  L +E+ + G  +    Y  +  G  ++ +   AIQ+L+ M++  +  
Sbjct: 490 GLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSA 549

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D +  +  VK ++DDG+ +   ++ ++ ++
Sbjct: 550 DASTMTLFVKMLSDDGLDQSLKQILREFVQ 579



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 122/470 (25%), Positives = 215/470 (45%), Gaps = 49/470 (10%)

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV------------PDTIT 189
           IM R +  P     ++L+   + +      SK L    + G +            P T+ 
Sbjct: 4   IMRRPSSRPSGTQMLSLLAHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVD 63

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           +N ++  + K     + ++L  +M   G  P++ T + ++ +     +   A       L
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           + G  P   T+T LI  +  +  I  A+ + D M  EG  PD+VTY +L+N  CK G   
Sbjct: 124 KLGHQPDTATFTTLIRGIYVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            A+ ++ +++ +  +PN   YNT++ SL   R   +A +   +++ +   SP +FTYN L
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGI-SPDIFTYNSL 242

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM---------------- 412
           I+ LC            N+MV     PD+V++NTV+ ALCKEG                 
Sbjct: 243 IHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302

Query: 413 -------------------LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
                              ++EA+++   +    C P +I+YNTLI+G  K   ++KAM 
Sbjct: 303 EPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMY 362

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L+G+M    + PD +T+ TLI G C  +++++A+ L  E+           YR+++  LC
Sbjct: 363 LFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLC 422

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           K++ +  A+ +L+ +  S   PD  V +  +  +   G  E A  L+  L
Sbjct: 423 KNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 472



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 77/276 (27%), Positives = 130/276 (47%)

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +++N   + S      D A+   N +L     P+++ +N LL S+        +  +   
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+     P ++T +ILIN  C    V  A +   +++    QPD  T+ T++  +  EG 
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGIYVEGK 146

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EAL L   + G    P ++TY TLI+GL K G    A+ L G M++    P+   + T
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I   C+  QV EA +L  E+  +G       Y  +IH LC   +      +L  M+ S+
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             PD   F+T+V  +  +G   EA+ +  K+I+  V
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302


>gi|242041853|ref|XP_002468321.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
 gi|241922175|gb|EER95319.1| hypothetical protein SORBIDRAFT_01g043770 [Sorghum bicolor]
          Length = 794

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 134/463 (28%), Positives = 239/463 (51%), Gaps = 1/463 (0%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           +L +  G  +  D  T N +L+  C +G L +A  L+  M +    P       L+    
Sbjct: 232 TLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEGIAPTRATYNTLVSAYA 291

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDV 222
           R+  I++A+ V++ M   G  PD  TYN++  GLC+ G++  A  L DEM  +S   PDV
Sbjct: 292 RLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEHLSIVSPDV 351

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           +TYNT++   F   +   A+   ++   KG    L+T+ I+++ +C++  +  A+  L  
Sbjct: 352 VTYNTLVDACFKYQRSSDALNLLEEMRDKGVKSSLVTHNIVVKGLCREGQLEEALGRLKM 411

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  EG +PD++TYN+L++  CK      A ++++ ++  G++ ++ T NTLL++L     
Sbjct: 412 MTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKR 471

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           ++  +++L    +    P   +Y  ++    K    + A+  +++M  +   P I TYNT
Sbjct: 472 YEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNT 531

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LC  G L EA+  L+ L      P   TYN +I    K+G +EKA   + +M+EN 
Sbjct: 532 LIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENY 591

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             PD +T  TL+ G C   ++E+A+ L +   ++G K+    Y  +I  LCK   VD A+
Sbjct: 592 FKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTAL 651

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                M +   +PD   ++ ++  +++ G +EEA  +  KL E
Sbjct: 652 HFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHKLDE 694



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/470 (26%), Positives = 217/470 (46%), Gaps = 41/470 (8%)

Query: 136 ASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASK--VLQIMVMSGGVPDTITYNM 192
           A++L+    RR  + P       ++  L R       +   V + ++     P+  T+N+
Sbjct: 156 AAQLLHSFRRRGHVRPSLQAANAVLSALARSPSTSPQASLDVFRSLIALRLHPNHYTFNL 215

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           +V   C +G +  A++ L  M   G  PDV+TYNT+L+     G   +A        ++G
Sbjct: 216 LVHTHCSKGTLADALSTLSTMQGFGLSPDVVTYNTLLKAHCRKGMLGEARTLLARMKKEG 275

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P   TY  L+    +   I +A  V++ M   G  PD+ TYN L    C+ GK D+A 
Sbjct: 276 IAPTRATYNTLVSAYARLGWIKQATNVVEAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAF 335

Query: 313 LVINNLLSRGM-EPNSITYNTLLHS-LGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
            + + +    +  P+ +TYNTL+ +    +   DA++ +L+ M +     ++ T+NI++ 
Sbjct: 336 KLKDEMEHLSIVSPDVVTYNTLVDACFKYQRSSDALN-LLEEMRDKGVKSSLVTHNIVVK 394

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA------------------------ 406
           GLC+ G ++ A+     M  +   PD++TYNT++ A                        
Sbjct: 395 GLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSGLKM 454

Query: 407 -----------LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
                      LCKE    EA +LL         P  ++Y T++    K+   E A+ L+
Sbjct: 455 DTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPALYLW 514

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M +  ++P   T+ TLI G C   ++ EA+D L E+ K+G    ++ Y ++IH  CK 
Sbjct: 515 DEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAYCKE 574

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             ++ A Q    M+ + +KPD    +T++  +   G  E+A KL++   E
Sbjct: 575 GDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAE 624



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 191/396 (48%), Gaps = 36/396 (9%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +++GL R  ++E+A   L++M   G  PD ITYN ++   CK   +  A  L+DEM  SG
Sbjct: 392 VVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEMVRSG 451

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            + D  T NT+L  +    ++++A    +   ++G  P  ++Y  ++    K+     A+
Sbjct: 452 LKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKPEPAL 511

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + D+M+    +P I TYN+L+   C  GK  +A+  +N L+ +G+ P+  TYN ++H+ 
Sbjct: 512 YLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNIIIHAY 571

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +   +  + M E    P V T N L+NGLC +G +++AI  F     K  + D+
Sbjct: 572 CKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGKKVDV 631

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +TYNT++ ALCK+G ++ AL     +      P   TYN ++  L++ G  E+A  +  +
Sbjct: 632 ITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQNMLHK 691

Query: 458 MMENG------------------------------------ISPDDITHRTLIWGFCRAD 481
           + E+G                                       D  ++   +   C   
Sbjct: 692 LDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKELCVGG 751

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           Q++EA  +L E+ ++G  + +S Y  ++ GL K +K
Sbjct: 752 QLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKRQK 787



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 181/397 (45%), Gaps = 36/397 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T+N +++  C  G+L +A   + +M      PD      LI    +   + KA  ++  M
Sbjct: 388 THNIVVKGLCREGQLEEALGRLKMMTEEGLAPDVITYNTLIDAYCKARNVAKAFVLMDEM 447

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V SG   DT T N ++  LCK  +   A  LL      G  PD ++Y T++   F   K 
Sbjct: 448 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSPPQRGFVPDEVSYGTVMAAYFKENKP 507

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A+  W +  ++   P + TY  LI+ +C    +  AI+ L+++  +G  PD  TYN +
Sbjct: 508 EPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKLTEAIDKLNELMKKGLVPDDTTYNII 567

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G  + A    N +L    +P+ +T NTL++ L   G  +   K+ +   E   
Sbjct: 568 IHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLFESWAEKGK 627

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              V TYN LI  LCK G VD A++ F  M ++  QPD  TYN VL AL + G   EA  
Sbjct: 628 KVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRSEEAQN 687

Query: 419 LLHLLNGSS-----CSPCLI-------------------------------TYNTLIDGL 442
           +LH L+ S       S  LI                               +YN  +  L
Sbjct: 688 MLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQESYNKSVKEL 747

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              G +++A  +  +MM+ G+S D  T+ TL+ G  +
Sbjct: 748 CVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIK 784



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 160/363 (44%), Gaps = 36/363 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C    +  A  L+D M R     D      L+  L +  R E+A ++L+  
Sbjct: 423 TYNTLIDAYCKARNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRSP 482

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VPD ++Y  ++    K  +   A+ L DEMS     P + TYNT+++ +   GK 
Sbjct: 483 PQRGFVPDEVSYGTVMAAYFKENKPEPALYLWDEMSKRKLTPSIYTYNTLIKGLCTIGKL 542

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +AI    + ++KG  P   TY I+I   CK+  + +A +  + M      PD+VT N+L
Sbjct: 543 TEAIDKLNELMKKGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTL 602

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C  GK + A+ +  +   +G + + ITYNTL+ +L   G  D        M     
Sbjct: 603 MNGLCLHGKLEKAIKLFESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGL 662

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQM-----------------------------V 389
            P  FTYN++++ L + G  + A N  +++                             V
Sbjct: 663 QPDAFTYNVVLSALSEAGRSEEAQNMLHKLDESGKLSERFSYPLIKSSAEEVKTGKDPEV 722

Query: 390 SKNCQP-------DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             +C+        D  +YN  +  LC  G L EA  +L  +     S    TY TL++GL
Sbjct: 723 KSDCESGGNAKGGDQESYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGL 782

Query: 443 AKK 445
            K+
Sbjct: 783 IKR 785



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 104/227 (45%), Gaps = 3/227 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T N I+  +C  G L  A +  + M      PD   C  L+ GL    ++EKA K+ 
Sbjct: 560 DDTTYNIIIHAYCKEGDLEKAFQFHNKMLENYFKPDVVTCNTLMNGLCLHGKLEKAIKLF 619

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +     G   D ITYN ++  LCK G + +A+    +M   G +PD  TYN +L  + + 
Sbjct: 620 ESWAEKGKKVDVITYNTLIQALCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEA 679

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP--DIV 293
           G+ ++A          G      +Y  LI+   ++    +  EV  D    G +   D  
Sbjct: 680 GRSEEAQNMLHKLDESGKLSERFSYP-LIKSSAEEVKTGKDPEVKSDCESGGNAKGGDQE 738

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           +YN  V   C  G+  +A  V++ ++ +GM  +S TY TL+  L  R
Sbjct: 739 SYNKSVKELCVGGQLKEAKAVLDEMMQKGMSVDSSTYITLMEGLIKR 785


>gi|224130702|ref|XP_002328355.1| predicted protein [Populus trichocarpa]
 gi|222838070|gb|EEE76435.1| predicted protein [Populus trichocarpa]
          Length = 608

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 135/489 (27%), Positives = 253/489 (51%), Gaps = 26/489 (5%)

Query: 100 SHDPSLPSSDGPFVENDEKTNNKILQNFCS---------RGKLTDASKLIDIMARR---- 146
           +  PSLP ++G FV N+  TN  I     S         R  + +  K +   A++    
Sbjct: 47  TRKPSLPQNNGGFVSNNS-TNISIDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYS 105

Query: 147 ------NQIPDFHFCIN------LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
                 NQ+  F    N      LI  L R++ ++ A  +L  M   G  P   T+N ++
Sbjct: 106 TVVSLCNQMDLFGVTHNVYSLNVLINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALI 165

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            GLC  G+I+ A+ L +EM   G EP+VI+YNTI+  +   G    A+  +K   + GC 
Sbjct: 166 NGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCK 225

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P ++TY  +I+ +CK   +  A+E L +M   G  P++ TYN +V+  C  G+ ++A  +
Sbjct: 226 PDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEATRL 285

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
              ++ R + P+++T   L+  L   G       + + M E    P + TYN L++G C 
Sbjct: 286 FKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCL 345

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
             L++ A   F  M+ + C P + +YN ++   CK   ++EA  LL  +   + +P  +T
Sbjct: 346 QRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVT 405

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y+TL+ GL + G  ++A+ ++ +M   G+ P+ +T+  L+ GFC+   ++EA+ LLK + 
Sbjct: 406 YSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQ 465

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           ++  +     + ++I G+  + K+++A ++   + +   +P    ++ ++K +  +G+++
Sbjct: 466 EKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSD 525

Query: 555 EAYKLWQKL 563
           EAY L++K+
Sbjct: 526 EAYDLFRKM 534



 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 125/407 (30%), Positives = 207/407 (50%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL    +I++A ++   MV  G  P+ I+YN ++ GLCK G    A+ +  +M  +G
Sbjct: 164 LINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNG 223

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+PDV+TYNTI+ ++  +     A+ F  + L +G PP + TY  ++   C    +  A 
Sbjct: 224 CKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQLNEAT 283

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +  +M      PD VT   LV+  CK+G   +A LV   +  +G+EPN  TYN L+   
Sbjct: 284 RLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGY 343

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             +   +   K+ +IM     +P V +YNILING CK   +D A +   +M  K   PD 
Sbjct: 344 CLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDT 403

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTY+T++  LC+ G   EAL +   +      P L+TY+ L+DG  K G +++A+ L   
Sbjct: 404 VTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKS 463

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M E  + P+ + H  LI G   A ++E A +L  ++   G +     Y ++I GL K   
Sbjct: 464 MQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGL 523

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            D A  +   M    + P+   ++ +++    +  +  A +L  +++
Sbjct: 524 SDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMV 570



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 221/432 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C+ GK+ +A +L + M RR   P+      +I GL +      A  V + M
Sbjct: 160 TFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVDVFKKM 219

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  PD +TYN ++  LCK   +  A+  L EM   G  P+V TYN ++      G+ 
Sbjct: 220 EQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFCILGQL 279

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +K+ + +   P  +T TIL++ +CK+  ++ A  V + M  +G  P+I TYN+L
Sbjct: 280 NEATRLFKEMVGRDVMPDTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNAL 339

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C Q   ++A  V   ++ +G  P   +YN L++        D    +L  M   + 
Sbjct: 340 MDGYCLQRLMNEAKKVFEIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKAL 399

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   TY+ L+ GLC++G    A+N F +M S    P++VTY+ +L   CK G L+EAL+
Sbjct: 400 NPDTVTYSTLMQGLCQFGRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALK 459

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +      P ++ +  LI+G+   G +E A  L+ ++  +GI P   T+  +I G  
Sbjct: 460 LLKSMQEKKLEPNIVHHTILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLL 519

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +    +EA DL +++   G    + +Y ++I G  +++    AI++++ M+  R+  + +
Sbjct: 520 KEGLSDEAYDLFRKMEDDGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLS 579

Query: 539 VFSTIVKKVADD 550
            F  ++   + D
Sbjct: 580 TFQMLLDLESQD 591



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 199/402 (49%), Gaps = 2/402 (0%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I+ A      MV     P    +   +G   K+ Q  + ++L ++M + G   +V + N 
Sbjct: 69  IDDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNV 128

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +        A+       + G  P   T+  LI  +C +  I  A+E+ ++M   G
Sbjct: 129 LINCLCRLNHVDFAVSILGKMFKLGIHPTASTFNALINGLCNEGKIKEAVELFNEMVRRG 188

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAV 346
             P++++YN+++N  CK G    AV V   +   G +P+ +TYNT++ SL   R   DA+
Sbjct: 189 HEPNVISYNTIINGLCKTGNTSMAVDVFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAM 248

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           + + ++++     P VFTYN +++G C  G ++ A   F +MV ++  PD VT   ++  
Sbjct: 249 EFLSEMLDRGI-PPNVFTYNCMVHGFCILGQLNEATRLFKEMVGRDVMPDTVTLTILVDG 307

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LCKEGM++EA  +   +      P + TYN L+DG   +  M +A  ++  M+  G +P 
Sbjct: 308 LCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVFEIMIRQGCAPG 367

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             ++  LI GFC++ +++EA  LL E+  +        Y  ++ GLC+  +   A+ + +
Sbjct: 368 VHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQFGRPKEALNIFK 427

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            M S    P+   +S ++      G  +EA KL + + E K+
Sbjct: 428 EMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKL 469



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 138/289 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G +++A  + + M  +   P+      L+ G      + +A KV 
Sbjct: 297 DTVTLTILVDGLCKEGMVSEARLVFETMTEKGVEPNISTYNALMDGYCLQRLMNEAKKVF 356

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +IM+  G  P   +YN+++ G CK  ++  A +LL EM      PD +TY+T+++ +   
Sbjct: 357 EIMIRQGCAPGVHSYNILINGFCKSRRMDEAKSLLAEMYHKALNPDTVTYSTLMQGLCQF 416

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K+A+  +K+    G  P L+TY+IL++  CK   +  A+++L  M  +   P+IV +
Sbjct: 417 GRPKEALNIFKEMCSYGLLPNLVTYSILLDGFCKHGHLDEALKLLKSMQEKKLEPNIVHH 476

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+      GK + A  + + L + G+ P   TY  ++  L   G  D    +   M +
Sbjct: 477 TILIEGMFIAGKLEVAKELFSKLFADGIRPTIRTYTVMIKGLLKEGLSDEAYDLFRKMED 536

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               P   +YN++I G  +      AI   ++MV K    ++ T+  +L
Sbjct: 537 DGFLPNSCSYNVMIQGFLQNQDSSTAIRLIDEMVGKRFSANLSTFQMLL 585



 Score = 90.9 bits (224), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 64/267 (23%), Positives = 119/267 (44%), Gaps = 35/267 (13%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           DDA+     ++     P+   +   L S   +  +  V  + + M+    +  V++ N+L
Sbjct: 70  DDALASFYRMVRMNPRPSVAEFGKFLGSFAKKKQYSTVVSLCNQMDLFGVTHNVYSLNVL 129

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN LC+   VD A+                   ++LG + K G+                
Sbjct: 130 INCLCRLNHVDFAV-------------------SILGKMFKLGI---------------- 154

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P   T+N LI+GL  +G +++A+ L+ +M+  G  P+ I++ T+I G C+      AVD
Sbjct: 155 HPTASTFNALINGLCNEGKIKEAVELFNEMVRRGHEPNVISYNTIINGLCKTGNTSMAVD 214

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           + K++ + G K     Y  +I  LCK + V+ A++ L  M+     P+   ++ +V    
Sbjct: 215 VFKKMEQNGCKPDVVTYNTIIDSLCKDRLVNDAMEFLSEMLDRGIPPNVFTYNCMVHGFC 274

Query: 549 DDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             G   EA +L+++++   V     TL
Sbjct: 275 ILGQLNEATRLFKEMVGRDVMPDTVTL 301


>gi|4836917|gb|AAD30619.1|AC007153_11 similar to indole-3-acetate beta-glucosyltransferase [Arabidopsis
            thaliana]
          Length = 1184

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 128/425 (30%), Positives = 216/425 (50%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  + + ++  +C  G+L    KLI++M R+   P+ +   ++I  L RI ++ +A +  
Sbjct: 723  DVISYSTVVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAF 782

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              M+  G +PDT+ Y  ++ G CKRG IR+A     EM      PDV+TY  I+      
Sbjct: 783  SEMIRQGILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 842

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            G   +A   + +   KG  P  +T+T LI   CK   +  A  V + M   GCSP++VTY
Sbjct: 843  GDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTY 902

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             +L++  CK+G  D A  +++ +   G++PN  TYN++++ L   G  +   K++     
Sbjct: 903  TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 962

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            A  +    TY  L++  CK G +D+A     +M+ K  QP IVT+N ++   C  GML +
Sbjct: 963  AGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1022

Query: 416  ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
              +LL+ +     +P   T+N+L+     +  ++ A  +Y  M   G+ PD  T+  L+ 
Sbjct: 1023 GEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVK 1082

Query: 476  GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            G C+A  ++EA  L +E+  +G  +  S Y ++I G  K KK   A +V + M       
Sbjct: 1083 GHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAA 1142

Query: 536  DDTVF 540
            D  +F
Sbjct: 1143 DKEIF 1147



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 212/425 (49%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++   C  G++ +A  L+ +M  +   PD      ++ G  R   ++K  K++++M  
Sbjct: 693  NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 752

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
             G  P++  Y  ++G LC+  ++  A     EM   G  PD + Y T++      G  + 
Sbjct: 753  KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 812

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A  F+ +   +   P ++TYT +I   C+   +  A ++  +M  +G  PD VT+  L+N
Sbjct: 813  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 872

Query: 301  FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              CK G   DA  V N+++  G  PN +TY TL+  L   G  D+ +++L  M +    P
Sbjct: 873  GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 932

Query: 361  TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             +FTYN ++NGLCK G ++ A+    +  +     D VTY T++ A CK G +++A ++L
Sbjct: 933  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 992

Query: 421  HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              + G    P ++T+N L++G    G +E    L   M+  GI+P+  T  +L+  +C  
Sbjct: 993  KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 1052

Query: 481  DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            + ++ A  + K++  RG       Y  ++ G CK++ +  A  + + M    +    + +
Sbjct: 1053 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 1112

Query: 541  STIVK 545
            S ++K
Sbjct: 1113 SVLIK 1117



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 214/422 (50%), Gaps = 6/422 (1%)

Query: 148  QIPDFHFCINL------IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            + P+   C N+      I  + ++ RI++A  +L +M + G  PD I+Y+ +V G C+ G
Sbjct: 679  EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 738

Query: 202  QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
            ++     L++ M   G +P+   Y +I+  +    K  +A   + + +R+G  P  + YT
Sbjct: 739  ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 798

Query: 262  ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
             LI+  CK+  I  A +   +M     +PD++TY ++++  C+ G   +A  + + +  +
Sbjct: 799  TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 858

Query: 322  GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            G+EP+S+T+  L++     G      ++ + M +A  SP V TY  LI+GLCK G +D A
Sbjct: 859  GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 918

Query: 382  INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
                ++M     QP+I TYN+++  LCK G + EA++L+     +  +   +TY TL+D 
Sbjct: 919  NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 978

Query: 442  LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
              K G M+KA  +  +M+  G+ P  +T   L+ GFC    +E+   LL  +  +G    
Sbjct: 979  YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 1038

Query: 502  NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             + +  ++   C    +  A  + + M S    PD   +  +VK        +EA+ L+Q
Sbjct: 1039 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 1098

Query: 562  KL 563
            ++
Sbjct: 1099 EM 1100



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 171/344 (49%), Gaps = 3/344 (0%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC-GIAR 275
           G +P V  ++   + + D G  ++A   ++  L  G    + +  + + ++ K C   A 
Sbjct: 615 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 672

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           AI V  +    G   ++ +YN +++F C+ G+  +A  ++  +  +G  P+ I+Y+T+++
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                G  D V K++++M      P  + Y  +I  LC+   +  A  +F++M+ +   P
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D V Y T++   CK G +  A +  + ++    +P ++TY  +I G  + G M +A  L+
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M   G+ PD +T   LI G+C+A  +++A  +   + + G       Y  +I GLCK 
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             +D A ++L  M     +P+   +++IV  +   G  EEA KL
Sbjct: 913 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 956



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 133/284 (46%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            +E D  T  +++  +C  G + DA ++ + M +    P+      LI GL +   ++ A+
Sbjct: 860  LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 919

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++L  M   G  P+  TYN +V GLCK G I  A+ L+ E   +G   D +TY T++   
Sbjct: 920  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 979

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              +G+  +A    K+ L KG  P ++T+ +L+   C    +    ++L+ M  +G +P+ 
Sbjct: 980  CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1039

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             T+NSLV   C +     A  +  ++ SRG+ P+  TY  L+              +   
Sbjct: 1040 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 1099

Query: 353  MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
            M     S +V TY++LI G  K      A   F+QM  +    D
Sbjct: 1100 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 1143



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 128/258 (49%), Gaps = 2/258 (0%)

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A++V       G+  N  +YN ++H +   G       +L +M    ++P V +Y+ ++N
Sbjct: 673 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 732

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G C++G +D+       M  K  +P+   Y +++G LC+   L EA +    +      P
Sbjct: 733 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 792

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             + Y TLIDG  K+G +  A   + +M    I+PD +T+  +I GFC+   + EA  L 
Sbjct: 793 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 852

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+  +G +  +  +  +I+G CK+  +  A +V   MI +   P+   ++T++  +  +
Sbjct: 853 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 912

Query: 551 GMTEEAYKLWQKLIEWKV 568
           G  + A +L  ++  WK+
Sbjct: 913 GDLDSANELLHEM--WKI 928



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 49/204 (24%), Positives = 90/204 (44%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T   ++  +C  G++  A +++  M  +   P       L+ G      +E   K+L
Sbjct: 968  DTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1027

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              M+  G  P+  T+N +V   C R  +++A A+  +M   G  PD  TY  +++     
Sbjct: 1028 NWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKA 1087

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               K+A   +++   KG    + TY++LI+   K+     A EV D M  EG + D   +
Sbjct: 1088 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 1147

Query: 296  NSLVNFSCKQGKYDDAVLVINNLL 319
            +   +   K  + D  V  I+ ++
Sbjct: 1148 DFFSDTKYKGKRPDTIVDPIDEII 1171


>gi|15231863|ref|NP_190938.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174107|sp|Q9LFF1.1|PP281_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g53700, chloroplastic; AltName: Full=Protein MATERNAL
           EFFECT EMBRYO ARREST 40; Flags: Precursor
 gi|6729521|emb|CAB67677.1| putative protein [Arabidopsis thaliana]
 gi|15982931|gb|AAL09812.1| AT3g53700/F4P12_400 [Arabidopsis thaliana]
 gi|332645608|gb|AEE79129.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 754

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 143/436 (32%), Positives = 221/436 (50%), Gaps = 13/436 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF-----HFCINLI-RGLIRIDRIE 169
           DEKT   ++Q +   G L  A ++      R Q+ +F     +  +N+I  G  +  R+E
Sbjct: 223 DEKTFTTVMQGYIEEGDLDGALRI------REQMVEFGCSWSNVSVNVIVHGFCKEGRVE 276

Query: 170 KASKVLQIMV-MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            A   +Q M    G  PD  T+N +V GLCK G ++ AI ++D M   G +PDV TYN++
Sbjct: 277 DALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSV 336

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +   G+ K+A+      + + C P  +TY  LI  +CK+  +  A E+   +  +G 
Sbjct: 337 ISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGI 396

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD+ T+NSL+   C    +  A+ +   + S+G EP+  TYN L+ SL S+G  D    
Sbjct: 397 LPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALN 456

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M  +  + +V TYN LI+G CK      A   F++M       + VTYNT++  LC
Sbjct: 457 MLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLC 516

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K   + +A QL+  +      P   TYN+L+    + G ++KA  +   M  NG  PD +
Sbjct: 517 KSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIV 576

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ TLI G C+A +VE A  LL+ I  +G  +   AY  VI GL + +K   AI +   M
Sbjct: 577 TYGTLISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREM 636

Query: 529 ISSRYKPDDTVFSTIV 544
           +     P D V   IV
Sbjct: 637 LEQNEAPPDAVSYRIV 652



 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 233/454 (51%), Gaps = 1/454 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N +++  C   +L  A  +++ M     +PD      +++G I    ++ A 
Sbjct: 185 IKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGAL 244

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRT 231
           ++ + MV  G     ++ N++V G CK G++  A+  + EMS   G  PD  T+NT++  
Sbjct: 245 RIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNG 304

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   G  K AI      L++G  P + TY  +I  +CK   +  A+EVLD M    CSP+
Sbjct: 305 LCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPN 364

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            VTYN+L++  CK+ + ++A  +   L S+G+ P+  T+N+L+  L          ++ +
Sbjct: 365 TVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFE 424

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M      P  FTYN+LI+ LC  G +D A+N   QM    C   ++TYNT++   CK  
Sbjct: 425 EMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQMELSGCARSVITYNTLIDGFCKAN 484

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
              EA ++   +     S   +TYNTLIDGL K   +E A  L  QM+  G  PD  T+ 
Sbjct: 485 KTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYN 544

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +L+  FCR   +++A D+++ +   G +     Y  +I GLCK+ +V++A ++L  +   
Sbjct: 545 SLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTLISGLCKAGRVEVASKLLRSIQMK 604

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                   ++ +++ +     T EA  L+++++E
Sbjct: 605 GINLTPHAYNPVIQGLFRKRKTTEAINLFREMLE 638



 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 232/437 (53%), Gaps = 7/437 (1%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           + + DG F   D+ T N ++   C  G +  A +++D+M +    PD +   ++I GL +
Sbjct: 285 MSNQDGFF--PDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCK 342

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           +  +++A +VL  M+     P+T+TYN ++  LCK  Q+  A  L   ++  G  PDV T
Sbjct: 343 LGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVLTSKGILPDVCT 402

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           +N++++ +      + A+  +++   KGC P   TY +LI+ +C +  +  A+ +L  M 
Sbjct: 403 FNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKLDEALNMLKQME 462

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCW 343
           + GC+  ++TYN+L++  CK  K  +A  + + +   G+  NS+TYNTL+  L  SR   
Sbjct: 463 LSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTLIDGLCKSRRVE 522

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           DA  +++D M      P  +TYN L+   C+ G + +A +    M S  C+PDIVTY T+
Sbjct: 523 DAA-QLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAMTSNGCEPDIVTYGTL 581

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NG 462
           +  LCK G +  A +LL  +     +     YN +I GL +K    +A+ L+ +M+E N 
Sbjct: 582 ISGLCKAGRVEVASKLLRSIQMKGINLTPHAYNPVIQGLFRKRKTTEAINLFREMLEQNE 641

Query: 463 ISPDDITHRTLIWGFCR-ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
             PD +++R +  G C     + EAVD L E+ ++G     S+  ++  GL      +  
Sbjct: 642 APPDAVSYRIVFRGLCNGGGPIREAVDFLVELLEKGFVPEFSSLYMLAEGLLTLSMEETL 701

Query: 522 IQVLEL-MISSRYKPDD 537
           ++++ + M  +R+  ++
Sbjct: 702 VKLVNMVMQKARFSEEE 718



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 215/415 (51%), Gaps = 1/415 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD HF   ++  L+  + ++        M + G  PD  T+N+++  LC+  Q+R AI +
Sbjct: 152 PDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALCRAHQLRPAILM 211

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L++M   G  PD  T+ T+++   + G    A+   +  +  GC    ++  +++   CK
Sbjct: 212 LEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNVSVNVIVHGFCK 271

Query: 270 QCGIARAIEVLDDMA-IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           +  +  A+  + +M+  +G  PD  T+N+LVN  CK G    A+ +++ +L  G +P+  
Sbjct: 272 EGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDVMLQEGYDPDVY 331

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TYN+++  L   G      ++LD M     SP   TYN LI+ LCK   V+ A      +
Sbjct: 332 TYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQVEEATELARVL 391

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
            SK   PD+ T+N+++  LC       A++L   +    C P   TYN LID L  KG +
Sbjct: 392 TSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNMLIDSLCSKGKL 451

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           ++A+ +  QM  +G +   IT+ TLI GFC+A++  EA ++  E+   G    +  Y  +
Sbjct: 452 DEALNMLKQMELSGCARSVITYNTLIDGFCKANKTREAEEIFDEMEVHGVSRNSVTYNTL 511

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           I GLCKS++V+ A Q+++ MI    KPD   +++++      G  ++A  + Q +
Sbjct: 512 IDGLCKSRRVEDAAQLMDQMIMEGQKPDKYTYNSLLTHFCRGGDIKKAADIVQAM 566



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/381 (25%), Positives = 185/381 (48%), Gaps = 37/381 (9%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK---------- 269
           P+   Y  IL  +  +G F       +D     C     T+ ILIE   +          
Sbjct: 81  PEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILSV 140

Query: 270 ------QCGIA-------RAIEVLDD-------------MAIEGCSPDIVTYNSLVNFSC 303
                 + G+        R + +L D             M++ G  PD+ T+N L+   C
Sbjct: 141 VDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKALC 200

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           +  +   A+L++ ++ S G+ P+  T+ T++      G  D   +I + M E   S +  
Sbjct: 201 RAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSNV 260

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           + N++++G CK G V+ A+N   +M +++   PD  T+NT++  LCK G +  A++++ +
Sbjct: 261 SVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMDV 320

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P + TYN++I GL K G +++A+ +  QM+    SP+ +T+ TLI   C+ +Q
Sbjct: 321 MLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKENQ 380

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEEA +L + +  +G       +  +I GLC ++   +A+++ E M S   +PD+  ++ 
Sbjct: 381 VEEATELARVLTSKGILPDVCTFNSLIQGLCLTRNHRVAMELFEEMRSKGCEPDEFTYNM 440

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++  +   G  +EA  + +++
Sbjct: 441 LIDSLCSKGKLDEALNMLKQM 461



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 80/312 (25%), Positives = 140/312 (44%), Gaps = 37/312 (11%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           SP+   Y  ++    + G +DD   ++ ++ S   E  + T+  L+ S       D +  
Sbjct: 80  SPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILIESYAQFELQDEILS 139

Query: 349 ILDIM----------------------------NEASHS--------PTVFTYNILINGL 372
           ++D M                             E SH+        P V T+N+LI  L
Sbjct: 140 VVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGIKPDVSTFNVLIKAL 199

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           C+   +  AI     M S    PD  T+ TV+    +EG L+ AL++   +    CS   
Sbjct: 200 CRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALRIREQMVEFGCSWSN 259

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMM-ENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           ++ N ++ G  K+G +E A+    +M  ++G  PD  T  TL+ G C+A  V+ A++++ 
Sbjct: 260 VSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLVNGLCKAGHVKHAIEIMD 319

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            + + G       Y  VI GLCK  +V  A++VL+ MI+    P+   ++T++  +  + 
Sbjct: 320 VMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMITRDCSPNTVTYNTLISTLCKEN 379

Query: 552 MTEEAYKLWQKL 563
             EEA +L + L
Sbjct: 380 QVEEATELARVL 391



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 72/295 (24%), Positives = 140/295 (47%), Gaps = 39/295 (13%)

Query: 309 DDAVLVINNLLSR--GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           D A L + NL S+     P    Y  +L  LG  G +D + KIL+ M  +       T+ 
Sbjct: 63  DSAALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFL 122

Query: 367 ILINGLCKYGL-------VDRAINSF-------------NQMVSKNC------------- 393
           ILI    ++ L       VD  I+ F             N +V  N              
Sbjct: 123 ILIESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSV 182

Query: 394 ---QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
              +PD+ T+N ++ ALC+   L  A+ +L  +      P   T+ T++ G  ++G ++ 
Sbjct: 183 WGIKPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDG 242

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVI 509
           A+ +  QM+E G S  +++   ++ GFC+  +VE+A++ ++E+  +     +   +  ++
Sbjct: 243 ALRIREQMVEFGCSWSNVSVNVIVHGFCKEGRVEDALNFIQEMSNQDGFFPDQYTFNTLV 302

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +GLCK+  V  AI+++++M+   Y PD   +++++  +   G  +EA ++  ++I
Sbjct: 303 NGLCKAGHVKHAIEIMDVMLQEGYDPDVYTYNSVISGLCKLGEVKEAVEVLDQMI 357



 Score = 53.1 bits (126), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 41/188 (21%), Positives = 90/188 (47%), Gaps = 2/188 (1%)

Query: 381 AINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           A+  FN    K N  P+   Y  +L  L + G  ++  ++L  +  S C     T+  LI
Sbjct: 66  ALRLFNLASKKPNFSPEPALYEEILLRLGRSGSFDDMKKILEDMKSSRCEMGTSTFLILI 125

Query: 440 DGLAKKGCMEKAMVLYGQMM-ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +  A+    ++ + +   M+ E G+ PD   +  ++      + ++       ++   G 
Sbjct: 126 ESYAQFELQDEILSVVDWMIDEFGLKPDTHFYNRMLNLLVDGNSLKLVEISHAKMSVWGI 185

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           K   S + ++I  LC++ ++  AI +LE M S    PD+  F+T+++   ++G  + A +
Sbjct: 186 KPDVSTFNVLIKALCRAHQLRPAILMLEDMPSYGLVPDEKTFTTVMQGYIEEGDLDGALR 245

Query: 559 LWQKLIEW 566
           + ++++E+
Sbjct: 246 IREQMVEF 253


>gi|297805766|ref|XP_002870767.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
 gi|297316603|gb|EFH47026.1| EMB2745 [Arabidopsis lyrata subsp. lyrata]
          Length = 747

 Score =  234 bits (597), Expect = 9e-59,   Method: Compositional matrix adjust.
 Identities = 135/474 (28%), Positives = 241/474 (50%), Gaps = 15/474 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++ FC  G L  A +  D M ++  +P+      LI G  ++ +I+   ++L+ M
Sbjct: 207 TYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDGFELLRSM 266

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G  P+ I+YN+++ GLC+ G+++    +L EM+  G   D +TYNT+++     G F
Sbjct: 267 ALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKGYCKEGNF 326

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA+    + LR G  P +ITYT LI  +CK   + RA E LD M + G  P+  TY +L
Sbjct: 327 HQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPNERTYTTL 386

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+   ++G  ++A  V+  ++  G  P+ +TYN L++     G       +L+ M E   
Sbjct: 387 VDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLEDMKEKGL 446

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V +Y+ +++G C+   VD A+    +MV+K  +PD +TY++++   C++    EA  
Sbjct: 447 TPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQRRTKEACD 506

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P   TY  LI+    +G ++KA+ L+ +M+E G+ PD +T+  LI G  
Sbjct: 507 LFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVLPDVVTYSVLINGLN 566

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH---------------GLCKSKKVDMAIQ 523
           +  +  EA  LL ++    +   +  Y  +I                G C    +  A Q
Sbjct: 567 KQARTREAKRLLLKLFYEESVPSDVTYHTLIENCSNIEFKSVVSLIKGFCMKGMMTEADQ 626

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           V E M+   +KPD T ++ ++      G   +AY L++++++        T++A
Sbjct: 627 VFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIA 680



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/403 (29%), Positives = 201/403 (49%), Gaps = 1/403 (0%)

Query: 163 IRIDR-IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
           IR  R I  A  V + M+ S   P+  TYN+++ G C  G +  A+   D M   GC P+
Sbjct: 180 IRSKRNISFAENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPN 239

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           V+TYNT++       K        +    KG  P LI+Y ++I  +C++  +     VL 
Sbjct: 240 VVTYNTLIDGYCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLT 299

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +M   G S D VTYN+L+   CK+G +  A+++   +L  G+ P+ ITY +L+HS+   G
Sbjct: 300 EMNKRGYSLDEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAG 359

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             +   + LD M      P   TY  L++G  + G ++ A     +M+     P +VTYN
Sbjct: 360 NMNRATEFLDQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYN 419

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            ++   C  G + +A+ +L  +     +P +++Y+T++ G  +   +++A+ +  +M+  
Sbjct: 420 ALINGHCIAGKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAK 479

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           GI PD IT+ +LI GFC   + +EA DL  E+ + G       Y  +I+  C    +  A
Sbjct: 480 GIKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKA 539

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           IQ+   M+     PD   +S ++  +     T EA +L  KL 
Sbjct: 540 IQLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLF 582



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 116/413 (28%), Positives = 217/413 (52%), Gaps = 1/413 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK-RGQIRSAIALLDEMSVS 216
           +++   R+  I+KA  ++ +    G +P  ++YN ++    + +  I  A  +  EM  S
Sbjct: 140 VVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEMLQS 199

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
              P+V TYN ++R     G    A+ F+    +KGC P ++TY  LI+  CK   I   
Sbjct: 200 QVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDGYCKLRKIDDG 259

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            E+L  MA++G  P++++YN ++N  C++G+  +   V+  +  RG   + +TYNTL+  
Sbjct: 260 FELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLDEVTYNTLIKG 319

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               G +     +   M     SP+V TY  LI+ +CK G ++RA    +QM  +   P+
Sbjct: 320 YCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFLDQMRVRGLCPN 379

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             TY T++    ++G +NEA ++L  +  +  SP ++TYN LI+G    G M  A+ +  
Sbjct: 380 ERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIAGKMVDAIAVLE 439

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M E G++PD +++ T++ GFCR+  V+EA+ + +++  +G K     Y  +I G C+ +
Sbjct: 440 DMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITYSSLIQGFCEQR 499

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           +   A  + + M+     PD+  ++ ++     +G  ++A +L  +++E  V 
Sbjct: 500 RTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVEKGVL 552



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 107/405 (26%), Positives = 182/405 (44%), Gaps = 22/405 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T N +++ +C  G    A  +   M R    P      +LI  + +   + +A++ L
Sbjct: 309 DEVTYNTLIKGYCKEGNFHQALVMHAEMLRHGLSPSVITYTSLIHSMCKAGNMNRATEFL 368

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G  P+  TY  +V G  ++G +  A  +L EM  +G  P V+TYN ++      
Sbjct: 369 DQMRVRGLCPNERTYTTLVDGFSQKGYMNEAYRVLKEMIDNGFSPSVVTYNALINGHCIA 428

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   AI   +D   KG  P +++Y+ ++   C+   +  A+ V   M  +G  PD +TY
Sbjct: 429 GKMVDAIAVLEDMKEKGLTPDVVSYSTVLSGFCRSYDVDEALRVKRKMVAKGIKPDTITY 488

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +SL+   C+Q +  +A  + + +L  G+ P+  TY  L+++    G      ++ + M E
Sbjct: 489 SSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAIQLHNEMVE 548

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V TY++LINGL K      A     ++  +   P  VTY+T++           
Sbjct: 549 KGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLI----------- 597

Query: 416 ALQLLHLLNGSSCSPC-LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
                      +CS     +  +LI G   KG M +A  ++  M+E    PD   +  +I
Sbjct: 598 ----------ENCSNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMI 647

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
            G CR   + +A  L KE+ K G  +       ++  L K  KV+
Sbjct: 648 HGHCRGGDIRKAYSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVN 692



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 106/208 (50%), Gaps = 15/208 (7%)

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK--------EGMLNEA 416
           +++++    +  L+D+A++  +   +    P +++YN VL A  +        E +  E 
Sbjct: 137 FDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFAENVFKEM 196

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           LQ       S  SP + TYN LI G    G ++ A+  + +M + G  P+ +T+ TLI G
Sbjct: 197 LQ-------SQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDG 249

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +C+  ++++  +LL+ +  +G +    +Y +VI+GLC+  ++     VL  M    Y  D
Sbjct: 250 YCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKEISFVLTEMNKRGYSLD 309

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +  ++T++K    +G   +A  +  +++
Sbjct: 310 EVTYNTLIKGYCKEGNFHQALVMHAEML 337



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 68/261 (26%), Positives = 117/261 (44%), Gaps = 20/261 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T + ++Q FC + +  +A  L D M R    PD      LI        ++KA 
Sbjct: 481 IKPDTITYSSLIQGFCEQRRTKEACDLFDEMLRVGLPPDEFTYTALINAYCMEGDLQKAI 540

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   MV  G +PD +TY++++ GL K+ + R A  LL ++      P  +TY+T++   
Sbjct: 541 QLHNEMVEKGVLPDVVTYSVLINGLNKQARTREAKRLLLKLFYEESVPSDVTYHTLIENC 600

Query: 233 FDNGKFKQAI----GF------------WKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
             N +FK  +    GF            ++  L K   P    Y ++I   C+   I +A
Sbjct: 601 -SNIEFKSVVSLIKGFCMKGMMTEADQVFESMLEKNHKPDGTAYNVMIHGHCRGGDIRKA 659

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +  +M   G     VT  +LV    K+GK ++   VI N+L R  E +      +L  
Sbjct: 660 YSLYKEMVKSGFLLHTVTVIALVKTLHKEGKVNELNSVIANVL-RSCELSEAEQAKVLVE 718

Query: 337 LGSRGCWDAVDKILDIMNEAS 357
           +  R     +D +LD++ E +
Sbjct: 719 INHR--EGNMDVVLDVLAEMA 737



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 37/164 (22%), Positives = 83/164 (50%), Gaps = 1/164 (0%)

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG-LAKKGCMEKA 451
           C      ++ V+ +  +  ++++AL ++HL       P +++YN ++D  +  K  +  A
Sbjct: 130 CNSTSSVFDLVVKSYSRLCLIDKALSIVHLSQAHGFMPGVLSYNAVLDATIRSKRNISFA 189

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             ++ +M+++ +SP+  T+  LI GFC A  ++ A+     + K+G       Y  +I G
Sbjct: 190 ENVFKEMLQSQVSPNVFTYNILIRGFCLAGNLDVALRFFDRMEKKGCLPNVVTYNTLIDG 249

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            CK +K+D   ++L  M     +P+   ++ ++  +  +G  +E
Sbjct: 250 YCKLRKIDDGFELLRSMALKGLEPNLISYNVVINGLCREGRMKE 293


>gi|302826367|ref|XP_002994672.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
 gi|300137182|gb|EFJ04264.1| hypothetical protein SELMODRAFT_432576 [Selaginella moellendorffii]
          Length = 816

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/465 (28%), Positives = 234/465 (50%), Gaps = 13/465 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  +   ++      GKL DA  L   +      P      +LI GL   +  + A 
Sbjct: 319 VSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCMANSFDDAR 378

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M   G  P  +TYN+M+   CKRG +  A  L+ +M   G  PDV+TYNT++  +
Sbjct: 379 ELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVTYNTVMDGL 438

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILI---------EQVCKQCGIARAIEVLDDM 283
             + + ++A+  + +  R GC P   ++  +I         +Q C++  +  A  +L  M
Sbjct: 439 CKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDEAFRLLKRM 498

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             +G  PD+VTY++L++  C   + DDA  ++ +++ R  +P  +T NTL+H L   G  
Sbjct: 499 TDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQCKPTVVTQNTLIHGLCKAGRI 558

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
               ++LD M  +  SP V TYN L++G C+ G  +RA    + MV++   P++VTY  +
Sbjct: 559 KEAREVLDAMVSSGQSPDVVTYNTLVHGHCRAGQTERARELLSDMVARGLAPNVVTYTAL 618

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +  LCK   L EA  +   +  S C+P L TY  LI G    G ++  + L+G+M+  GI
Sbjct: 619 VSGLCKANRLPEACGVFAQMKSSGCAPNLFTYTALILGFCSAGQVDGGLKLFGEMVCAGI 678

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGK---RGNKMRNSAYRLVIHGLCKSKKVDM 520
           SPD + + TL    C++ +   A+++L+E G+   R     +  YR  + GL ++ K++M
Sbjct: 679 SPDHVVYGTLAAELCKSGRSARALEILRE-GRESLRSEAWGDEVYRFAVDGLLEAGKMEM 737

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           A+  +  M+     P     +++V  +   G   EA  + +++++
Sbjct: 738 ALGFVRDMVRGGQLPAPERCASLVAGLCKSGQGGEARAVLEEIMD 782



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 131/467 (28%), Positives = 237/467 (50%), Gaps = 22/467 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   IL   C  GK+ +A  ++D M  R   P F     L   L     +E+A ++L
Sbjct: 78  DSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSFLAHELCLRGSMERAFQLL 137

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +IM     V ++  YN++V  LCK  ++  A+ L   MS         + +++L  + D+
Sbjct: 138 EIMP----VANSSAYNIVVVALCKAARVDDALELARTMSEKRIPLAAGSLDSVLVGLMDS 193

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A+  +++  R+ C   L+T  +L+E  C +  + +A E+L  M  E C+PD V+Y
Sbjct: 194 GRIDEALQVYRENRREPC---LVTLNVLLEGFCSRGQVDKARELLRAMPDEECAPDEVSY 250

Query: 296 NSLVNFSCKQGKYDDAVLVINN------LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            ++++  CK G+ ++AV +  +        S    P+   YN ++  L      D   ++
Sbjct: 251 CTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYNIVILGLCQNDRIDEAVQM 310

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            + MNE + SP  ++Y ILI+GL K G ++ A N F +++     P  V Y +++  LC 
Sbjct: 311 FEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHSGVTPSTVAYTSLIHGLCM 370

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
               ++A +L   +N   C P  +TYN +ID   K+G +E+A  L  +M+E+G  PD +T
Sbjct: 371 ANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEACDLIKKMIEDGHVPDVVT 430

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ------ 523
           + T++ G C++ +VEEA+ L  E+ + G      ++  +I GLC+  K+D A Q      
Sbjct: 431 YNTVMDGLCKSSRVEEALLLFNEMERLGCTPNRRSHNTIILGLCQQSKIDQACQRGKLDE 490

Query: 524 ---VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
              +L+ M    + PD   +ST++  +      ++A  L + +++ +
Sbjct: 491 AFRLLKRMTDDGHVPDVVTYSTLISGLCSIARVDDARHLLEDMVKRQ 537



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 208/462 (45%), Gaps = 49/462 (10%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M ++   P      ++I+G   + R  +A K+  +M      P    YN+++  L KR +
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIFSLMEECHS-PYPDVYNVLIDSLSKRQE 59

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
             +   ++  M   GC PD  T+ TIL  +   GK  +A     +   +  PPY  T + 
Sbjct: 60  TEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSSF 119

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L  ++C +  + RA ++L+ M +   S     YN +V   CK  + DDA+ +   +  + 
Sbjct: 120 LAHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEKR 175

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +   + + +++L  L   G    +D+ L +  E    P + T N+L+ G C  G VD+A 
Sbjct: 176 IPLAAGSLDSVLVGLMDSG---RIDEALQVYRENRREPCLVTLNVLLEGFCSRGQVDKAR 232

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEG------------------------------- 411
                M  + C PD V+Y TVL  LCK G                               
Sbjct: 233 ELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGYN 292

Query: 412 ----------MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
                      ++EA+Q+   +N  + SP   +Y  LIDGLAK G +  A  L+ +++ +
Sbjct: 293 IVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLHS 352

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G++P  + + +LI G C A+  ++A +L  ++ +RG       Y ++I   CK   ++ A
Sbjct: 353 GVTPSTVAYTSLIHGLCMANSFDDARELFADMNRRGCPPSPVTYNVMIDASCKRGMLEEA 412

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             +++ MI   + PD   ++T++  +      EEA  L+ ++
Sbjct: 413 CDLIKKMIEDGHVPDVVTYNTVMDGLCKSSRVEEALLLFNEM 454



 Score =  154 bits (390), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 106/363 (29%), Positives = 184/363 (50%), Gaps = 16/363 (4%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC-PPYLITYTILIEQVCKQC 271
           M   G  P  + + ++++   + G+  +A+  +   L + C  PY   Y +LI+ + K+ 
Sbjct: 1   MFQQGIFPAPLLFTSVIQGWCNVGRTFEAVKIF--SLMEECHSPYPDVYNVLIDSLSKRQ 58

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
                 +++  M   GC PD  T+ +++   CK GK D+A LV++ + SR + P   T +
Sbjct: 59  ETEAVKKMVQVMVDRGCFPDSFTFTTILCGLCKAGKMDEAELVMDEMRSRMIPPYFATSS 118

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            L H L  RG  +   ++L+IM  A+ S     YNI++  LCK   VD A+     M  K
Sbjct: 119 FLAHELCLRGSMERAFQLLEIMPVANSS----AYNIVVVALCKAARVDDALELARTMSEK 174

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
                  + ++VL  L   G ++EALQ+      +   PCL+T N L++G   +G ++KA
Sbjct: 175 RIPLAAGSLDSVLVGLMDSGRIDEALQVYR---ENRREPCLVTLNVLLEGFCSRGQVDKA 231

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL--KEIGKRGNKMRNS----AY 505
             L   M +   +PD++++ T++ G C+A +VEEAV L   +E+    +   +      Y
Sbjct: 232 RELLRAMPDEECAPDEVSYCTVLDGLCKAGRVEEAVRLFGDRELPSSSSSSSSPPSLRGY 291

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +VI GLC++ ++D A+Q+ E M      PD   +  ++  +A  G   +A  L+QKL+ 
Sbjct: 292 NIVILGLCQNDRIDEAVQMFEKMNERNVSPDSWSYGILIDGLAKAGKLNDARNLFQKLLH 351

Query: 566 WKV 568
             V
Sbjct: 352 SGV 354


>gi|224092696|ref|XP_002309701.1| predicted protein [Populus trichocarpa]
 gi|222855677|gb|EEE93224.1| predicted protein [Populus trichocarpa]
          Length = 597

 Score =  234 bits (597), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/391 (32%), Positives = 215/391 (54%), Gaps = 4/391 (1%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
            LI GL ++    +A ++   MV  G  PD  TYN ++ GLCK G+  +A  LL +M  +
Sbjct: 168 TLINGLCKVGEFAQAVELFDDMVAKGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEA 227

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           GC+P+++TY+T++ ++  +    +A+  +     KG  P + TYT LI+ +CK      A
Sbjct: 228 GCQPNMVTYSTLIDSLCRDRLVNEALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEA 287

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +L++M      PDIVT+N LV+  CK+GK  +A+ V+  +   G+EPN +TY++L++ 
Sbjct: 288 SALLNEMTSLNIMPDIVTFNVLVDTFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMY- 346

Query: 337 LGSRGCWDAVD--KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            G     D V+  K+  +M      P +F+YNILING CK   +D A+  FN+M+ +   
Sbjct: 347 -GYSLWTDVVEARKLFHVMITKGCKPNIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLT 405

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+ V+YNT++   C+ G L EA  L   +  +   P L TY+ L+DG  K+G + KA  L
Sbjct: 406 PNNVSYNTLIHGFCQLGKLREAQDLFRNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRL 465

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +  M    + P+ + +  L+   C++   ++A  L  E+  +G +     Y  +I+GLCK
Sbjct: 466 FRAMQSTYLKPNLVMYTILVHAMCKSGNHKDARKLFSELFVQGLQPHVQLYTTIINGLCK 525

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
              +D A++    M +    PD+  ++ I++
Sbjct: 526 EGLLDEALEAFRNMEADGCPPDEISYNVIIR 556



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 113/434 (26%), Positives = 229/434 (52%), Gaps = 7/434 (1%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRI----DRIEKASKVLQIMVMSGGVPDTITY 190
           DA    + M  R  +P       L+  ++++    D +   SK ++++ +S   P+  T 
Sbjct: 75  DALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLS---PNIYTL 131

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           ++ +   C+  ++    ++L ++   G +P ++T+ T++  +   G+F QA+  + D + 
Sbjct: 132 SIFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVA 191

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           KGC P + TY  +I  +CK    A A  +L  M   GC P++VTY++L++  C+    ++
Sbjct: 192 KGCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNE 251

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ + + + ++G+ P+  TY +L+  L     W     +L+ M   +  P + T+N+L++
Sbjct: 252 ALDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVD 311

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
             CK G V  A+     M     +P++VTY++++        + EA +L H++    C P
Sbjct: 312 TFCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKP 371

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            + +YN LI+G  K   +++AM L+ +M+  G++P+++++ TLI GFC+  ++ EA DL 
Sbjct: 372 NIFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLF 431

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           + +   GN      Y +++ G CK   +  A ++   M S+  KP+  +++ +V  +   
Sbjct: 432 RNMCTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKS 491

Query: 551 GMTEEAYKLWQKLI 564
           G  ++A KL+ +L 
Sbjct: 492 GNHKDARKLFSELF 505



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/405 (29%), Positives = 204/405 (50%), Gaps = 3/405 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + D  T N I+   C  G+   A+ L+  M      P+      LI  L R   + +A  
Sbjct: 195 QPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEALD 254

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G  PD  TY  ++ GLCK  + + A ALL+EM+     PD++T+N ++ T  
Sbjct: 255 IFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTFC 314

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK  +A+G  K     G  P ++TY+ L+        +  A ++   M  +GC P+I 
Sbjct: 315 KEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPNIF 374

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN L+N  CK  + D+A+ + N ++ +G+ PN+++YNTL+H     G       +   M
Sbjct: 375 SYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFRNM 434

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
               + P +FTY+IL++G CK G + +A   F  M S   +P++V Y  ++ A+CK G  
Sbjct: 435 CTNGNLPDLFTYSILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYTILVHAMCKSGNH 494

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +A +L   L      P +  Y T+I+GL K+G +++A+  +  M  +G  PD+I++  +
Sbjct: 495 KDARKLFSELFVQGLQPHVQLYTTIINGLCKEGLLDEALEAFRNMEADGCPPDEISYNVI 554

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           I G  +      A+ L+ E+  RG     +  R  +  +C+ KKV
Sbjct: 555 IRGLLQHKDESRALLLVGEMRDRGFI---ADVRPCLSEVCQGKKV 596



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 104/362 (28%), Positives = 190/362 (52%), Gaps = 1/362 (0%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGCPPYLITYT 261
           I  A+A  + M      P +I +  +L  +   G++   +     Q+   G  P + T +
Sbjct: 73  IDDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLS 132

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           I +   C+   +     VL  +   G  P IVT+ +L+N  CK G++  AV + ++++++
Sbjct: 133 IFMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAK 192

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G +P+  TYNT+++ L   G   A   +L  M EA   P + TY+ LI+ LC+  LV+ A
Sbjct: 193 GCQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEA 252

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           ++ F+ M +K   PDI TY +++  LCK     EA  LL+ +   +  P ++T+N L+D 
Sbjct: 253 LDIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDT 312

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K+G + +A+ +   M E G+ P+ +T+ +L++G+     V EA  L   +  +G K  
Sbjct: 313 FCKEGKVSEALGVLKTMTEMGVEPNVVTYSSLMYGYSLWTDVVEARKLFHVMITKGCKPN 372

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             +Y ++I+G CK+K++D A+Q+   MI     P++  ++T++      G   EA  L++
Sbjct: 373 IFSYNILINGYCKAKRIDEAMQLFNEMIHQGLTPNNVSYNTLIHGFCQLGKLREAQDLFR 432

Query: 562 KL 563
            +
Sbjct: 433 NM 434



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 125/261 (47%), Gaps = 1/261 (0%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNI 367
           DDA+   N++L R   P  I +  LL ++   G  +D V  +   M     SP ++T +I
Sbjct: 74  DDALASFNHMLHRKPLPCIIQFAKLLSAIVKMGQYYDVVISLSKQMELVGLSPNIYTLSI 133

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
            +N  C+   VD   +   +++    QP IVT+ T++  LCK G   +A++L   +    
Sbjct: 134 FMNCFCQLQRVDLGFSVLAKVIKLGLQPTIVTFTTLINGLCKVGEFAQAVELFDDMVAKG 193

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C P + TYNT+I+GL K G    A  L  +M E G  P+ +T+ TLI   CR   V EA+
Sbjct: 194 CQPDVYTYNTIINGLCKIGETAAAAGLLKKMEEAGCQPNMVTYSTLIDSLCRDRLVNEAL 253

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           D+   +  +G       Y  +I GLCK  +   A  +L  M S    PD   F+ +V   
Sbjct: 254 DIFSYMKAKGISPDIFTYTSLIQGLCKFSRWKEASALLNEMTSLNIMPDIVTFNVLVDTF 313

Query: 548 ADDGMTEEAYKLWQKLIEWKV 568
             +G   EA  + + + E  V
Sbjct: 314 CKEGKVSEALGVLKTMTEMGV 334


>gi|359488050|ref|XP_002263119.2| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Vitis vinifera]
          Length = 686

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 228/444 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +++  C  GK+ +A  L D        PD      L+ GL ++     A ++L
Sbjct: 219 DNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLL 278

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV     P+ I YN ++  LCK  Q+  A  L  EM   G  PD+ TYN+++  + + 
Sbjct: 279 RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNL 338

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            ++K       + +     P ++ ++ +++ +CK+  IA A +V+D M   G  PD+VTY
Sbjct: 339 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 398

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++  C + + D+AV V + ++ +G  PN  +YN L++        D    +L+ M+ 
Sbjct: 399 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 458

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                   TYN LI+GLC  G +  AI  F++MV+    PD+VTY  +L  LCK   L E
Sbjct: 459 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE 518

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ LL  + GS+    ++ YN  IDG+ + G +E A  L+  +   G+ PD  T+  +I 
Sbjct: 519 AMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIH 578

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+   ++EA  L +++ + G       Y  +I G  +S +   A Q+L+ M++  +  
Sbjct: 579 GLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSA 638

Query: 536 DDTVFSTIVKKVADDGMTEEAYKL 559
           D +  + IV+ ++DDG+ +   +L
Sbjct: 639 DVSTTTLIVEMLSDDGLDQSFERL 662



 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 144/474 (30%), Positives = 235/474 (49%), Gaps = 4/474 (0%)

Query: 95  TITKKSHDPSLPS----SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           +I K  H  ++ S     D   +  D  T N ++ +FC   +L  A  ++  + +    P
Sbjct: 159 SIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQP 218

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D      LIRGL    +I +A  +    +  G  PD +TY  ++ GLCK G   +AI LL
Sbjct: 219 DNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLL 278

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
             M    C P+VI YNTI+ ++  + +  +A   + + + KG  P + TY  LI  +C  
Sbjct: 279 RSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNL 338

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           C       +L++M      P++V ++++V+  CK+G    A  V++ ++ RG+EP+ +TY
Sbjct: 339 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 398

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
             L+     R   D   K+ D M      P V +YNILING C+   +D+A+    QM  
Sbjct: 399 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 458

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +    D VTYNT++  LC  G L  A+ L H +  S   P L+TY  L+D L K   + +
Sbjct: 459 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAE 518

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           AMVL   +  + +  D + +   I G CRA ++E A DL   +  +G +     Y ++IH
Sbjct: 519 AMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIH 578

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           GLCK   +D A ++   M  +    D  +++TI++       T  A +L Q+++
Sbjct: 579 GLCKRGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEML 632



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 219/416 (52%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD +    LI     + R+  A  VL  ++  G  PD  T+N ++ GLC  G+I  A+ L
Sbjct: 183 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 242

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
            D+    G +PDV+TY T++  +   G    AI   +  ++K C P +I Y  +I+ +CK
Sbjct: 243 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 302

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A  +  +M  +G SPDI TYNSL++  C   ++     ++N +++  + PN + 
Sbjct: 303 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 362

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           ++T++ +L   G       ++D+M +    P V TY  L++G C    +D A+  F+ MV
Sbjct: 363 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 422

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            K C P++ +YN ++   C+   +++A+ LL  ++        +TYNTLI GL   G ++
Sbjct: 423 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 482

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A+ L+ +M+ +G  PD +T+R L+   C+   + EA+ LLK I           Y + I
Sbjct: 483 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 542

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            G+C++ +++ A  +   + S   +PD   ++ ++  +   G+ +EA KL++K+ E
Sbjct: 543 DGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDE 598



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 225/431 (52%), Gaps = 6/431 (1%)

Query: 139 LIDIMARRNQIPDFH---FCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTITYNM 192
           L D ++  N++   H     ++  + L  I +++  S VL +   M   G  PD  T N+
Sbjct: 131 LDDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNI 190

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++   C   ++  A ++L ++   GC+PD  T+NT++R +   GK  +A+  +   + +G
Sbjct: 191 LINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEG 250

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P ++TY  L+  +CK    + AI +L  M  + C P+++ YN++++  CK  +  +A 
Sbjct: 251 FQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAF 310

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            + + ++++G+ P+  TYN+L+H+L +   W  V  +L+ M  +   P V  ++ +++ L
Sbjct: 311 NLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 370

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G++  A +  + M+ +  +PD+VTY  ++   C    ++EA+++   +    C P +
Sbjct: 371 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 430

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
            +YN LI+G  +   M+KAM L  QM   G+  D +T+ TLI G C   +++ A+ L  E
Sbjct: 431 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 490

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +   G       YR+++  LCK+  +  A+ +L+ +  S    D  V++  +  +   G 
Sbjct: 491 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 550

Query: 553 TEEAYKLWQKL 563
            E A  L+  L
Sbjct: 551 LEAARDLFSNL 561



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 174/345 (50%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P  + +  +L ++     +   +         G PP + T  ILI   C    +  A  V
Sbjct: 148 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 207

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L  +   GC PD  T+N+L+   C +GK  +A+ + +  +  G +P+ +TY TL++ L  
Sbjct: 208 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 267

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G   A  ++L  M + +  P V  YN +I+ LCK   V  A N F++M++K   PDI T
Sbjct: 268 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 327

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           YN+++ ALC          LL+ +  S   P ++ ++T++D L K+G +  A  +   M+
Sbjct: 328 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 387

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           + G+ PD +T+  L+ G C   +++EAV +   +  +G      +Y ++I+G C+ +++D
Sbjct: 388 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 447

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            A+ +LE M       D   ++T++  +   G  + A  L+ +++
Sbjct: 448 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 492



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 128/260 (49%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           DDA+   N +L     P+++ +  LL S+     +  V  +   M+     P V+T NIL
Sbjct: 132 DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 191

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN  C    +  A +   +++   CQPD  T+NT++  LC EG + EAL L     G   
Sbjct: 192 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGF 251

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P ++TY TL++GL K G    A+ L   M++    P+ I + T+I   C+  QV EA +
Sbjct: 252 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 311

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L  E+  +G       Y  +IH LC   +      +L  M++S+  P+  VFST+V  + 
Sbjct: 312 LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 371

Query: 549 DDGMTEEAYKLWQKLIEWKV 568
            +GM   A+ +   +I+  V
Sbjct: 372 KEGMIAIAHDVVDMMIKRGV 391



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 34/132 (25%), Positives = 59/132 (44%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L + +G  ++ D    N  +   C  G+L  A  L   ++ +   PD      +I GL +
Sbjct: 523 LKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGLCK 582

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
              +++A+K+ + M  +G   D   YN ++ G  +  +   A  LL EM   G   DV T
Sbjct: 583 RGLLDEANKLFRKMDENGCSRDGCIYNTIIRGFLRSNETFGATQLLQEMLAEGFSADVST 642

Query: 225 YNTILRTMFDNG 236
              I+  + D+G
Sbjct: 643 TTLIVEMLSDDG 654


>gi|242043130|ref|XP_002459436.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
 gi|241922813|gb|EER95957.1| hypothetical protein SORBIDRAFT_02g004626 [Sorghum bicolor]
          Length = 684

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 139/481 (28%), Positives = 240/481 (49%), Gaps = 31/481 (6%)

Query: 125 QNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV 184
           +  C  G+  DA  L+  MAR   +PD      +I  L+    + +A+ +L  M++ G  
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY------------------- 225
            D  T+N +V GLC  G +R A  L+D M + GC P V+TY                   
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAM 307

Query: 226 ------------NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
                       NT++R     GK  +A   ++    KGCPP + TY IL+  +CK    
Sbjct: 308 LGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCKLGRC 367

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A+ +LD+M  +GC+P+IVTY++L++  C+ G +DDA  +++ + ++G   NS  YN +
Sbjct: 368 GSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQGYNGI 427

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +++LG  G  D   +++  M      P + TYN +I  LC    +D A + F  ++ +  
Sbjct: 428 IYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLLEEGV 487

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
             + +TYNT++ AL   G   E L+L + +    C   +++YN LI  L K+G ++++M+
Sbjct: 488 VANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMM 547

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L  +MM  GI P++ ++  LI   C+A +V +A++L KE+  +G       Y  +I+GLC
Sbjct: 548 LLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLC 607

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
           K      A+ +LE + +    PD   ++ ++       + ++A  L  K +   +     
Sbjct: 608 KVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNER 667

Query: 574 T 574
           T
Sbjct: 668 T 668



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 222/465 (47%), Gaps = 40/465 (8%)

Query: 136 ASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           A  L+D M RR  + P F     ++  L R D    A  + + M+     P T T+ +  
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
             LC+ G+ R A+ALL  M+  GC PD + Y T++  +   G   +A     + L  GC 
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
             + T+  ++  +C    +  A  ++D M + GC+P +VTY  L+   C+  + D+A   
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY-- 305

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
              +L R  E N +  NT++    + G      ++ ++M      P V TYNIL++GLCK
Sbjct: 306 --AMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCK 363

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM---------------------- 412
            G    A+   ++M  K C P+IVTY+T+L + C+ GM                      
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG 423

Query: 413 -------------LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
                        L+EA++L+  +    C P + TYNT+I  L     M++A  ++G ++
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           E G+  + IT+ TLI     + + +E + L  E+   G  +   +Y  +I  LCK   VD
Sbjct: 484 EEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVD 543

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++ +LE M++   KP++  ++ ++ ++   G   +A +L ++++
Sbjct: 544 RSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEML 588



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 214/432 (49%), Gaps = 8/432 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C  G + +A++L+D M      P       L+RGL R  + ++A  +L
Sbjct: 249 DVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAYAML 308

Query: 176 QIMVMSGGVPDT--ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
                 G VP+   +  N ++ G    G++  A  L + M   GC PDV TYN ++  + 
Sbjct: 309 ------GRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLC 362

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+   A+    +   KGC P ++TY+ L+   C+      A  +LD M+ +G S +  
Sbjct: 363 KLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQ 422

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            YN ++    K GK D+A+ ++  + S+G +P+  TYNT+++ L +    D  + I   +
Sbjct: 423 GYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNL 482

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E        TYN LI+ L   G     +   N+MV   C  D+V+YN ++ ALCKEG +
Sbjct: 483 LEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNV 542

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + ++ LL  +      P   +YN LI+ L K G +  A+ L  +M+  G++PD +T+ TL
Sbjct: 543 DRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTL 602

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+      A++LL+++           Y ++I   CK + +D A  +L+  +S   
Sbjct: 603 INGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGI 662

Query: 534 KPDDTVFSTIVK 545
            P++  +  +V+
Sbjct: 663 VPNERTWGMMVQ 674



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/366 (28%), Positives = 186/366 (50%), Gaps = 39/366 (10%)

Query: 91  LRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           LRGL  T+++ +    +  G   E +    N +++   + GKL  A++L ++M  +   P
Sbjct: 292 LRGLCRTRQADEAY--AMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPP 349

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D H    L+ GL ++ R   A ++L  M   G  P+ +TY+ ++   C+ G    A A+L
Sbjct: 350 DVHTYNILMHGLCKLGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAML 409

Query: 211 DEMSV-----------------------------------SGCEPDVITYNTILRTMFDN 235
           D+MS                                     GC+PD+ TYNTI+  + +N
Sbjct: 410 DQMSAKGFSMNSQGYNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNN 469

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A   + + L +G     ITY  LI  +         + + ++M + GC  D+V+Y
Sbjct: 470 DQMDEAEHIFGNLLEEGVVANGITYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSY 529

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMN 354
           N L+   CK+G  D +++++  ++++G++PN+ +YN L++ L   G   DA++   +++N
Sbjct: 530 NGLIKALCKEGNVDRSMMLLEEMMTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLN 589

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +   +P + TYN LINGLCK G    A+N   ++ ++N  PDIVTYN ++   CK  +L+
Sbjct: 590 QGL-TPDIVTYNTLINGLCKVGWTHAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLD 648

Query: 415 EALQLL 420
           +A  LL
Sbjct: 649 DASMLL 654



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 104/370 (28%), Positives = 182/370 (49%), Gaps = 5/370 (1%)

Query: 206 AIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           A+ LLD+M       P   +YN +L T+        A+  ++  LR   PP   T+ +  
Sbjct: 128 ALHLLDQMPRRFAVTPSFRSYNAVLSTLARADCHADALLLYRRMLRDRVPPTTFTFGVAA 187

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             +C+      A+ +L  MA  GC PD V Y ++++    QG   +A  +++ +L  G  
Sbjct: 188 RALCRLGRARDALALLRGMARHGCVPDAVLYQTVIHALVAQGGVAEAATLLDEMLLMGCA 247

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            +  T+N ++  L   G      +++D M     +P+V TY  L+ GLC+    D A   
Sbjct: 248 ADVNTFNDVVLGLCGLGHVREAARLVDRMMMHGCTPSVVTYGFLLRGLCRTRQADEAY-- 305

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
              M+ +  + ++V  NTV+     EG L  A +L  ++    C P + TYN L+ GL K
Sbjct: 306 --AMLGRVPEVNVVMLNTVIRGCLAEGKLARATELYEMMGSKGCPPDVHTYNILMHGLCK 363

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G    A+ +  +M E G +P+ +T+ TL+  FCR    ++A  +L ++  +G  M +  
Sbjct: 364 LGRCGSAVRMLDEMEEKGCAPNIVTYSTLLHSFCRNGMWDDARAMLDQMSAKGFSMNSQG 423

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I+ L K  K+D A+++++ M S   KPD   ++TI+  + ++   +EA  ++  L+
Sbjct: 424 YNGIIYALGKDGKLDEAMRLVQEMKSQGCKPDICTYNTIIYHLCNNDQMDEAEHIFGNLL 483

Query: 565 EWKVFEKGTT 574
           E  V   G T
Sbjct: 484 EEGVVANGIT 493



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 50/187 (26%), Positives = 88/187 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++      G+  +  +L + M       D      LI+ L +   ++++  +L+ M
Sbjct: 493 TYNTLIHALLHSGRWQEGLRLANEMVLHGCPLDVVSYNGLIKALCKEGNVDRSMMLLEEM 552

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+  +YNM++  LCK G++R A+ L  EM   G  PD++TYNT++  +   G  
Sbjct: 553 MTKGIKPNNFSYNMLINELCKAGKVRDALELSKEMLNQGLTPDIVTYNTLINGLCKVGWT 612

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+   +    +   P ++TY ILI   CK   +  A  +LD     G  P+  T+  +
Sbjct: 613 HAALNLLEKLPNENVHPDIVTYNILISWHCKVRLLDDASMLLDKAVSGGIVPNERTWGMM 672

Query: 299 VNFSCKQ 305
           V    +Q
Sbjct: 673 VQNFVRQ 679


>gi|334182313|ref|NP_172058.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|334182315|ref|NP_001154307.2| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|122236365|sp|Q0WVK7.1|PPR12_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g05670, mitochondrial; Flags: Precursor
 gi|110741796|dbj|BAE98841.1| hypothetical protein [Arabidopsis thaliana]
 gi|332189752|gb|AEE27873.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
 gi|332189753|gb|AEE27874.1| uncharacterized UDP-glucosyltransferase [Arabidopsis thaliana]
          Length = 741

 Score =  234 bits (596), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 127/418 (30%), Positives = 213/418 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C  G+L    KLI++M R+   P+ +   ++I  L RI ++ +A +    M+  G
Sbjct: 287 VVNGYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQG 346

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PDT+ Y  ++ G CKRG IR+A     EM      PDV+TY  I+      G   +A 
Sbjct: 347 ILPDTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAG 406

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   KG  P  +T+T LI   CK   +  A  V + M   GCSP++VTY +L++  
Sbjct: 407 KLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGL 466

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK+G  D A  +++ +   G++PN  TYN++++ L   G  +   K++     A  +   
Sbjct: 467 CKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADT 526

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY  L++  CK G +D+A     +M+ K  QP IVT+N ++   C  GML +  +LL+ 
Sbjct: 527 VTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNW 586

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P   T+N+L+     +  ++ A  +Y  M   G+ PD  T+  L+ G C+A  
Sbjct: 587 MLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARN 646

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           ++EA  L +E+  +G  +  S Y ++I G  K KK   A +V + M       D  +F
Sbjct: 647 MKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIF 704



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 117/443 (26%), Positives = 219/443 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G++ +A  L+ +M  +   PD      ++ G  R   ++K  K++++M  
Sbjct: 250 NIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFGELDKVWKLIEVMKR 309

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P++  Y  ++G LC+  ++  A     EM   G  PD + Y T++      G  + 
Sbjct: 310 KGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYTTLIDGFCKRGDIRA 369

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A  F+ +   +   P ++TYT +I   C+   +  A ++  +M  +G  PD VT+  L+N
Sbjct: 370 ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELIN 429

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G   DA  V N+++  G  PN +TY TL+  L   G  D+ +++L  M +    P
Sbjct: 430 GYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 489

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +FTYN ++NGLCK G ++ A+    +  +     D VTY T++ A CK G +++A ++L
Sbjct: 490 NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 549

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             + G    P ++T+N L++G    G +E    L   M+  GI+P+  T  +L+  +C  
Sbjct: 550 KEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIR 609

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           + ++ A  + K++  RG       Y  ++ G CK++ +  A  + + M    +    + +
Sbjct: 610 NNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTY 669

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           S ++K         EA +++ ++
Sbjct: 670 SVLIKGFLKRKKFLEAREVFDQM 692



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 116/422 (27%), Positives = 214/422 (50%), Gaps = 6/422 (1%)

Query: 148 QIPDFHFCINL------IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           + P+   C N+      I  + ++ RI++A  +L +M + G  PD I+Y+ +V G C+ G
Sbjct: 236 EFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVNGYCRFG 295

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++     L++ M   G +P+   Y +I+  +    K  +A   + + +R+G  P  + YT
Sbjct: 296 ELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILPDTVVYT 355

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            LI+  CK+  I  A +   +M     +PD++TY ++++  C+ G   +A  + + +  +
Sbjct: 356 TLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMFCK 415

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G+EP+S+T+  L++     G      ++ + M +A  SP V TY  LI+GLCK G +D A
Sbjct: 416 GLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSA 475

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
               ++M     QP+I TYN+++  LCK G + EA++L+     +  +   +TY TL+D 
Sbjct: 476 NELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDA 535

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K G M+KA  +  +M+  G+ P  +T   L+ GFC    +E+   LL  +  +G    
Sbjct: 536 YCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPN 595

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            + +  ++   C    +  A  + + M S    PD   +  +VK        +EA+ L+Q
Sbjct: 596 ATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQ 655

Query: 562 KL 563
           ++
Sbjct: 656 EM 657



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 91/305 (29%), Positives = 147/305 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+  FC  G + +A KL   M  +   PD      LI G  +   ++ A +V 
Sbjct: 385 DVLTYTAIISGFCQIGDMVEAGKLFHEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVH 444

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ +G  P+ +TY  ++ GLCK G + SA  LL EM   G +P++ TYN+I+  +  +
Sbjct: 445 NHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKS 504

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++A+    +    G     +TYT L++  CK   + +A E+L +M  +G  P IVT+
Sbjct: 505 GNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTF 564

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  C  G  +D   ++N +L++G+ PN+ T+N+L+     R    A   I   M  
Sbjct: 565 NVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNSLVKQYCIRNNLKAATAIYKDMCS 624

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TY  L+ G CK   +  A   F +M  K     + TY+ ++    K     E
Sbjct: 625 RGVGPDGKTYENLVKGHCKARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLE 684

Query: 416 ALQLL 420
           A ++ 
Sbjct: 685 AREVF 689



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 88/344 (25%), Positives = 171/344 (49%), Gaps = 3/344 (0%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC-GIAR 275
           G +P V  ++   + + D G  ++A   ++  L  G    + +  + + ++ K C   A 
Sbjct: 172 GSDPRV--FDVFFQVLVDFGLLREARRVFEKMLNYGLVLSVDSCNVYLTRLSKDCYKTAT 229

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           AI V  +    G   ++ +YN +++F C+ G+  +A  ++  +  +G  P+ I+Y+T+++
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                G  D V K++++M      P  + Y  +I  LC+   +  A  +F++M+ +   P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D V Y T++   CK G +  A +  + ++    +P ++TY  +I G  + G M +A  L+
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M   G+ PD +T   LI G+C+A  +++A  +   + + G       Y  +I GLCK 
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             +D A ++L  M     +P+   +++IV  +   G  EEA KL
Sbjct: 470 GDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKL 513



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 78/284 (27%), Positives = 133/284 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T  +++  +C  G + DA ++ + M +    P+      LI GL +   ++ A+
Sbjct: 417 LEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 476

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M   G  P+  TYN +V GLCK G I  A+ L+ E   +G   D +TY T++   
Sbjct: 477 ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 536

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G+  +A    K+ L KG  P ++T+ +L+   C    +    ++L+ M  +G +P+ 
Sbjct: 537 CKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 596

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+NSLV   C +     A  +  ++ SRG+ P+  TY  L+              +   
Sbjct: 597 TTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAWFLFQE 656

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           M     S +V TY++LI G  K      A   F+QM  +    D
Sbjct: 657 MKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAAD 700



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 128/258 (49%), Gaps = 2/258 (0%)

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A++V       G+  N  +YN ++H +   G       +L +M    ++P V +Y+ ++N
Sbjct: 230 AIIVFREFPEVGVCWNVASYNIVIHFVCQLGRIKEAHHLLLLMELKGYTPDVISYSTVVN 289

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G C++G +D+       M  K  +P+   Y +++G LC+   L EA +    +      P
Sbjct: 290 GYCRFGELDKVWKLIEVMKRKGLKPNSYIYGSIIGLLCRICKLAEAEEAFSEMIRQGILP 349

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             + Y TLIDG  K+G +  A   + +M    I+PD +T+  +I GFC+   + EA  L 
Sbjct: 350 DTVVYTTLIDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLF 409

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+  +G +  +  +  +I+G CK+  +  A +V   MI +   P+   ++T++  +  +
Sbjct: 410 HEMFCKGLEPDSVTFTELINGYCKAGHMKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKE 469

Query: 551 GMTEEAYKLWQKLIEWKV 568
           G  + A +L  ++  WK+
Sbjct: 470 GDLDSANELLHEM--WKI 485



 Score = 71.6 bits (174), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 56/257 (21%), Positives = 109/257 (42%), Gaps = 4/257 (1%)

Query: 67  IDRVNEVDQDEWSS--ESHVLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNK 122
           +D  NE+  + W    + ++   N  + GL  +    +    +   +   +  D  T   
Sbjct: 472 LDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTT 531

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C  G++  A +++  M  +   P       L+ G      +E   K+L  M+  G
Sbjct: 532 LMDAYCKSGEMDKAQEILKEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKG 591

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  T+N +V   C R  +++A A+  +M   G  PD  TY  +++        K+A 
Sbjct: 592 IAPNATTFNSLVKQYCIRNNLKAATAIYKDMCSRGVGPDGKTYENLVKGHCKARNMKEAW 651

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +++   KG    + TY++LI+   K+     A EV D M  EG + D   ++   +  
Sbjct: 652 FLFQEMKGKGFSVSVSTYSVLIKGFLKRKKFLEAREVFDQMRREGLAADKEIFDFFSDTK 711

Query: 303 CKQGKYDDAVLVINNLL 319
            K  + D  V  I+ ++
Sbjct: 712 YKGKRPDTIVDPIDEII 728


>gi|414865374|tpg|DAA43931.1| TPA: hypothetical protein ZEAMMB73_168023 [Zea mays]
          Length = 793

 Score =  233 bits (595), Expect = 1e-58,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 236/451 (52%), Gaps = 1/451 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C +G L +A  L+  M +   +P       L+    R+  I++A+ V+
Sbjct: 243 DAVTYNTLLNAHCRKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVV 302

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFD 234
           + M   G  PD  TYN++  GLC+ G++  A  L DEM   G   PDV+TYNT++   F 
Sbjct: 303 EAMTAFGFEPDLWTYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFK 362

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             +   A+   ++   KG    L+T+ I+++ +C++  +  A+  L+ M  EG +PD++T
Sbjct: 363 CQRSSDALNLLEEMREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVIT 422

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L++ SCK G    A ++++ ++  G++ ++ T NTLL++L     ++  +++L    
Sbjct: 423 YNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPP 482

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P   +Y  ++    K    + A+  +++M+ +   P I TYNT++  L   G L 
Sbjct: 483 QRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLT 542

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA+  L+ L      P   TYN +I    K+G +EKA   + +M+EN   PD +T  TL+
Sbjct: 543 EAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLM 602

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C   ++E+A+ L +   ++G K+    Y  +I  LCK   VD A++    M     +
Sbjct: 603 NGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQ 662

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   ++ ++  +++ G + EA K+  KL E
Sbjct: 663 PDVFTYNVLLSALSEAGRSVEAQKMLHKLNE 693



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/383 (29%), Positives = 194/383 (50%), Gaps = 3/383 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+  T+N++V   C +G +  A++ L +M   G  PD +TYNT+L      G   +A   
Sbjct: 207 PNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTL 266

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
                ++G  P   TY  L+    +   I +A +V++ M   G  PD+ TYN L    C+
Sbjct: 267 LARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQ 326

Query: 305 QGKYDDAVLVINNLLSRGM-EPNSITYNTLLHS-LGSRGCWDAVDKILDIMNEASHSPTV 362
            GK D+A  + + +   G+  P+ +TYNTL+ +    +   DA++ +L+ M E     ++
Sbjct: 327 AGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALN-LLEEMREKGVKSSL 385

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+NI++ GLC+ G ++ A+     M  +   PD++TYNT++ A CK G + +A  L+  
Sbjct: 386 VTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDE 445

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  S       T NTL+  L K+   E+A  L     + G  PD++++ T++  + +  +
Sbjct: 446 MVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYK 505

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
            E A+ L  E+ KR      S Y  +I GL    K+  AI  L  ++     PDDT ++ 
Sbjct: 506 PEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNI 565

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           I+     +G  E+A++   K++E
Sbjct: 566 IIHAYCKEGDLEKAFQFHNKMVE 588



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 194/396 (48%), Gaps = 36/396 (9%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +++GL R  ++E+A   L++M   G  PD ITYN ++   CK G +  A  L+DEM  SG
Sbjct: 391 IVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEMVRSG 450

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            + D  T NT+L  +    ++++A    +   ++G  P  ++Y  ++    K+     A+
Sbjct: 451 LKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKPEPAL 510

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + D+M     +P I TYN+L+      GK  +A+  +N L+  G+ P+  TYN ++H+ 
Sbjct: 511 CLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTTYNIIIHAY 570

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +   +  + M E S  P V T N L+NGLC YG +++A+  F   V K  + D+
Sbjct: 571 CKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLFESWVEKGKKVDV 630

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG----------C 447
           +TYNT++ ALCK+  ++ AL+    +      P + TYN L+  L++ G           
Sbjct: 631 ITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEAGRSVEAQKMLHK 690

Query: 448 MEKAMVLYGQM-----------MENGISP---------------DDITHRTLIWGFCRAD 481
           + ++  LYG+            +E G  P               D  ++   I   C   
Sbjct: 691 LNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQESYNKYIKELCIGG 750

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           Q++EA  +L E+ ++G  + NS Y  ++ GL K +K
Sbjct: 751 QLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKRQK 786



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/356 (30%), Positives = 172/356 (48%), Gaps = 1/356 (0%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P+  T+N ++ T    G    A+         G  P  +TY  L+   C++  +  A  +
Sbjct: 207 PNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGEARTL 266

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L  M  EG  P   TYN+LV+   + G    A  V+  + + G EP+  TYN L   L  
Sbjct: 267 LARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAAGLCQ 326

Query: 340 RGCWDAVDKILDIMNEAS-HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
            G  D   K+ D M +    SP V TYN L++   K      A+N   +M  K  +  +V
Sbjct: 327 AGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGVKSSLV 386

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           T+N ++  LC+EG L EAL  L ++     +P +ITYNTLID   K G + KA VL  +M
Sbjct: 387 THNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGNVAKAFVLMDEM 446

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           + +G+  D  T  TL++  C+  + EEA +LL+   +RG      +Y  V+    K  K 
Sbjct: 447 VRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAPPQRGFVPDEVSYGTVMAAYFKEYKP 506

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           + A+ + + MI  +  P  + ++T++K ++  G   EA     +L+E  +    TT
Sbjct: 507 EPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKLTEAIDKLNELMEMGLVPDDTT 562



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 98/363 (26%), Positives = 158/363 (43%), Gaps = 36/363 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G +  A  L+D M R     D      L+  L +  R E+A ++L+  
Sbjct: 422 TYNTLIDASCKAGNVAKAFVLMDEMVRSGLKMDTFTLNTLLYNLCKEKRYEEAEELLRAP 481

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VPD ++Y  ++    K  +   A+ L DEM      P + TYNT+++ +   GK 
Sbjct: 482 PQRGFVPDEVSYGTVMAAYFKEYKPEPALCLWDEMIKRKLTPSISTYNTLIKGLSTMGKL 541

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +AI    + +  G  P   TY I+I   CK+  + +A +  + M      PD+VT N+L
Sbjct: 542 TEAIDKLNELMEMGLVPDDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTL 601

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C  G+ + A+ +  + + +G + + ITYNTL+ +L      D   +    M     
Sbjct: 602 MNGLCLYGRLEKAMKLFESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGL 661

Query: 359 SPTVFTYNILINGLCKYG-----------------LVDR----AINSFNQMVSKNCQPDI 397
            P VFTYN+L++ L + G                 L  R    +I S  + V     P++
Sbjct: 662 QPDVFTYNVLLSALSEAGRSVEAQKMLHKLNESGKLYGRFFYPSIKSSVEAVETGKDPEV 721

Query: 398 VT---------------YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
            +               YN  +  LC  G L EA  +L  +     S    TY TL++GL
Sbjct: 722 KSDIESVGNTQGDDQESYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGL 781

Query: 443 AKK 445
            K+
Sbjct: 782 IKR 784



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/252 (27%), Positives = 129/252 (51%), Gaps = 1/252 (0%)

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
             ++L++  + PN  T+N L+H+  S+G        L  M     SP   TYN L+N  C
Sbjct: 196 AFHSLIALRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHC 255

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           + G++  A     +M  +   P   TYNT++ A  + G + +A  ++  +      P L 
Sbjct: 256 RKGMLGEARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLW 315

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGI-SPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           TYN L  GL + G +++A  L  +M + GI SPD +T+ TL+    +  +  +A++LL+E
Sbjct: 316 TYNVLAAGLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEE 375

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + ++G K     + +++ GLC+  +++ A+  LE+M      PD   ++T++      G 
Sbjct: 376 MREKGVKSSLVTHNIIVKGLCREGQLEEALGRLEMMTEEGLTPDVITYNTLIDASCKAGN 435

Query: 553 TEEAYKLWQKLI 564
             +A+ L  +++
Sbjct: 436 VAKAFVLMDEMV 447



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 107/227 (47%), Gaps = 3/227 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T N I+  +C  G L  A +  + M   +  PD   C  L+ GL    R+EKA K+ 
Sbjct: 559 DDTTYNIIIHAYCKEGDLEKAFQFHNKMVENSFKPDVVTCNTLMNGLCLYGRLEKAMKLF 618

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  V  G   D ITYN ++  LCK   + +A+    +M V G +PDV TYN +L  + + 
Sbjct: 619 ESWVEKGKKVDVITYNTLIQALCKDNDVDTALRFFADMEVRGLQPDVFTYNVLLSALSEA 678

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP--DIV 293
           G+  +A      +L +    Y   +   I+   +     +  EV  D+   G +   D  
Sbjct: 679 GRSVEAQKMLH-KLNESGKLYGRFFYPSIKSSVEAVETGKDPEVKSDIESVGNTQGDDQE 737

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           +YN  +   C  G+  +A  V++ ++ +GM  ++ TY TL+  L  R
Sbjct: 738 SYNKYIKELCIGGQLKEAKAVLDEMMQKGMSVDNSTYITLMEGLIKR 784



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/239 (25%), Positives = 115/239 (48%), Gaps = 18/239 (7%)

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD--RAINSFNQMVS 390
           LLHS   RGC                 P++   N +++ L +        ++++F+ +++
Sbjct: 158 LLHSFRRRGCV---------------RPSLQAANAVLSALARSPSTSPQASLDAFHSLIA 202

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
               P+  T+N ++   C +G L +AL  L  + G   SP  +TYNTL++   +KG + +
Sbjct: 203 LRLHPNHYTFNLLVHTHCSKGTLADALSTLSKMQGFGLSPDAVTYNTLLNAHCRKGMLGE 262

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A  L  +M + GI P   T+ TL+  + R   +++A D+++ +   G +     Y ++  
Sbjct: 263 ARTLLARMKKEGIVPTRATYNTLVSAYARLGWIKQATDVVEAMTAFGFEPDLWTYNVLAA 322

Query: 511 GLCKSKKVDMAIQVLELMIS-SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           GLC++ KVD A ++ + M       PD   ++T+V        + +A  L +++ E  V
Sbjct: 323 GLCQAGKVDEAFKLKDEMEQLGIVSPDVVTYNTLVDACFKCQRSSDALNLLEEMREKGV 381


>gi|255539805|ref|XP_002510967.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550082|gb|EEF51569.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 774

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 246/447 (55%), Gaps = 11/447 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++     R ++ +A KL++ M     +PD     ++I GL R++RI + +K++  M+  G
Sbjct: 249 LIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRG 308

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ ITY +++ GLC+ G++  A  LL+++      P+ + +  ++     +G+  +A 
Sbjct: 309 FTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTILINGYVKSGRLDEAN 364

Query: 243 GFWKDQL-RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
            F  D++ + GC P + T+  LI  +CK+  +  A+++++DM+  GC+P+++TY +L++ 
Sbjct: 365 AFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDG 424

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS-- 359
            CK+ + ++A  V+N + ++G E N + YN LL +L   G    V K LD++ E S    
Sbjct: 425 FCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNG---KVPKALDMLGEMSDKGC 481

Query: 360 -PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +FT+N LI GLCK    + A+  +  M+      + VTYNT++ A  + G + EAL+
Sbjct: 482 KPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALK 541

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L++ +    C    ITYN LI    K G  EKA+ L+ +M+   + P +I+   LI G C
Sbjct: 542 LVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLC 601

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  +V  A++LL+++  RG       Y  +I+GLCK   +  A  +   + +   +PD  
Sbjct: 602 RVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAI 661

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++T++      GM ++AY L  + +E
Sbjct: 662 TYNTLICWHCRAGMFDDAYLLLLRGVE 688



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 136/480 (28%), Positives = 235/480 (48%), Gaps = 36/480 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           K+ N +L    S    + A+ +   M  +  IP  +    +++ L  ++ ++ A  +L+ 
Sbjct: 174 KSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRD 233

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G VP+++ Y  ++  L KR ++  A+ LL+EM + GC PDV T+N ++  +    +
Sbjct: 234 MTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNR 293

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL----------------- 280
             +        L +G  P  ITY +L+  +C+   +  A  +L                 
Sbjct: 294 IHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKVPTPNDVHFTILING 353

Query: 281 ---------------DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
                          D M   GC PD+ T+N+L++  CK+G    AV ++N++ + G  P
Sbjct: 354 YVKSGRLDEANAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTP 413

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N ITY TLL     +   +    +L+ M+       +  YN+L+  LCK G V +A++  
Sbjct: 414 NLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDML 473

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH--LLNGSSCSPCLITYNTLIDGLA 443
            +M  K C+PDI T+NT++  LCK     +AL L    LL+G   +   +TYNTLI    
Sbjct: 474 GEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANT--VTYNTLIHAFL 531

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           + G +++A+ L   M+  G   D+IT+  LI  FC+    E+A+ L  E+ ++     N 
Sbjct: 532 RGGAIQEALKLVNDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNI 591

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +  L+I+GLC+  KV  A+++L  MI     PD   +++++  +   G   EA+ L+ KL
Sbjct: 592 SCNLLINGLCRVGKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKL 651



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/421 (31%), Positives = 217/421 (51%), Gaps = 53/421 (12%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F  ND  T   ++   C  GK+ +A  L++ +   N   D HF I LI G ++  R+++A
Sbjct: 309 FTPND-ITYGVLMNGLCRVGKVDEAQVLLNKVPTPN---DVHFTI-LINGYVKSGRLDEA 363

Query: 172 SKVL-QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           +  L   M+ +G  PD  T+N ++ GLCK+G + SA+ ++++MS +GC P++ITY T+L 
Sbjct: 364 NAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLD 423

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                 + ++A     +   KG    ++ Y +L+  +CK   + +A+++L +M+ +GC P
Sbjct: 424 GFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKP 483

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL---GS-------- 339
           DI T+N+L+   CK  + +DA+ +  ++L  G+  N++TYNTL+H+    G+        
Sbjct: 484 DIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLV 543

Query: 340 -----RGC----------------WDAVDKILDIMNEASHS---PTVFTYNILINGLCKY 375
                RGC                  A +K L + +E       P+  + N+LINGLC+ 
Sbjct: 544 NDMLFRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMVRKDLVPSNISCNLLINGLCRV 603

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G V  A+     M+ +   PD+VTYN+++  LCK G + EA  L + L      P  ITY
Sbjct: 604 GKVCNALELLRDMIHRGLAPDVVTYNSLINGLCKMGNIREAFNLFNKLQAEGIQPDAITY 663

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           NTLI    + G  + A +L  + +EN   P+D+T   L+  F            +KEIGK
Sbjct: 664 NTLICWHCRAGMFDDAYLLLLRGVENAFIPNDVTWYILVSNF------------IKEIGK 711

Query: 496 R 496
            
Sbjct: 712 E 712



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/395 (28%), Positives = 208/395 (52%), Gaps = 5/395 (1%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A+ V   M+  G +P   T+ +++  LC   ++ +A +LL +M+  GC P+ + Y T++ 
Sbjct: 192 AANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIH 251

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +    +  +A+   ++    GC P + T+  +I  +C+   I    +++D M   G +P
Sbjct: 252 ALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTP 311

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           + +TY  L+N  C+ GK D+A +++N + +    PN + +  L++     G  D  +  L
Sbjct: 312 NDITYGVLMNGLCRVGKVDEAQVLLNKVPT----PNDVHFTILINGYVKSGRLDEANAFL 367

Query: 351 -DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            D M +    P VFT+N LI+GLCK GL+  A++  N M +  C P+++TY T+L   CK
Sbjct: 368 YDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVNDMSANGCTPNLITYTTLLDGFCK 427

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +  L EA  +L+ ++       ++ YN L+  L K G + KA+ + G+M + G  PD  T
Sbjct: 428 KNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGKVPKALDMLGEMSDKGCKPDIFT 487

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             TLI+G C+ D+ E+A+ L +++   G       Y  +IH   +   +  A++++  M+
Sbjct: 488 FNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNTLIHAFLRGGAIQEALKLVNDML 547

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                 D+  ++ ++K     G TE+A  L+ +++
Sbjct: 548 FRGCPLDEITYNGLIKAFCKLGATEKALGLFDEMV 582



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 200/382 (52%), Gaps = 7/382 (1%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P   +YN+++  L        A  +  EM   G  P V T+  +++ +    +   A   
Sbjct: 171 PTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNACSL 230

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            +D  + GC P  + Y  LI  + K+  +  A+++L++M + GC PD+ T+N ++   C+
Sbjct: 231 LRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCR 290

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             +  +   +++ +L RG  PN ITY  L++ L   G    VD+   ++N+   +P    
Sbjct: 291 LNRIHEGAKLVDRMLFRGFTPNDITYGVLMNGLCRVG---KVDEAQVLLNKVP-TPNDVH 346

Query: 365 YNILINGLCKYGLVDRAINSF--NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           + ILING  K G +D A N+F  ++M+   C+PD+ T+NT++  LCK+G++  A+ +++ 
Sbjct: 347 FTILINGYVKSGRLDEA-NAFLYDKMIKNGCRPDVFTFNTLIHGLCKKGLMGSAVDMVND 405

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++ + C+P LITY TL+DG  KK  +E+A  +  +M   G   + + +  L+   C+  +
Sbjct: 406 MSANGCTPNLITYTTLLDGFCKKNQLEEAGYVLNEMSAKGFELNIMGYNVLLRALCKNGK 465

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V +A+D+L E+  +G K     +  +I GLCK  + + A+ +   M+      +   ++T
Sbjct: 466 VPKALDMLGEMSDKGCKPDIFTFNTLIFGLCKVDRKEDALALYRDMLLDGVIANTVTYNT 525

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           ++      G  +EA KL   ++
Sbjct: 526 LIHAFLRGGAIQEALKLVNDML 547



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 93/324 (28%), Positives = 154/324 (47%), Gaps = 19/324 (5%)

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI  W    +  C  + + Y +LI+++    G A+  +V+D + ++     I    SL  
Sbjct: 87  AIFQWAGSQKGYCHTFDV-YHVLIDKL----GAAKEFKVIDKLLLQIKEEGIAFRESL-- 139

Query: 301 FSCKQGKYDDAVL---VINNLLS-RGM---EPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           F C    Y  A L       LL  +G+   EP   +YN +L  L S  C      +   M
Sbjct: 140 FICIMKYYGRANLPGQATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEM 199

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 PTV+T+ +++  LC    VD A +    M    C P+ V Y T++ AL K   +
Sbjct: 200 LSKGVIPTVYTFGVVMKALCMVNEVDNACSLLRDMTKHGCVPNSVVYQTLIHALSKRDRV 259

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           NEAL+LL  +    C P + T+N +I GL +   + +   L  +M+  G +P+DIT+  L
Sbjct: 260 NEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKLVDRMLFRGFTPNDITYGVL 319

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL-ELMISSR 532
           + G CR  +V+EA  LL ++        +  + ++I+G  KS ++D A   L + MI + 
Sbjct: 320 MNGLCRVGKVDEAQVLLNKVPTP----NDVHFTILINGYVKSGRLDEANAFLYDKMIKNG 375

Query: 533 YKPDDTVFSTIVKKVADDGMTEEA 556
            +PD   F+T++  +   G+   A
Sbjct: 376 CRPDVFTFNTLIHGLCKKGLMGSA 399



 Score = 72.8 bits (177), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 54/219 (24%), Positives = 99/219 (45%), Gaps = 35/219 (15%)

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
           A   +LD+       PT  +YN++++ L        A N F +M+SK   P + T+  V+
Sbjct: 156 ATRMLLDMKGVYCCEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVM 215

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            ALC   M+NE          ++CS        L+  + K GC+                
Sbjct: 216 KALC---MVNEV--------DNACS--------LLRDMTKHGCV---------------- 240

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P+ + ++TLI    + D+V EA+ LL+E+   G       +  VI+GLC+  ++    ++
Sbjct: 241 PNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGLCRLNRIHEGAKL 300

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++ M+   + P+D  +  ++  +   G  +EA  L  K+
Sbjct: 301 VDRMLFRGFTPNDITYGVLMNGLCRVGKVDEAQVLLNKV 339



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 66/137 (48%)

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C P   +YN ++D L    C   A  ++ +M+  G+ P   T   ++   C  ++V+ A 
Sbjct: 169 CEPTFKSYNVVLDILVSANCPSVAANVFYEMLSKGVIPTVYTFGVVMKALCMVNEVDNAC 228

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            LL+++ K G    +  Y+ +IH L K  +V+ A+++LE M      PD   F+ ++  +
Sbjct: 229 SLLRDMTKHGCVPNSVVYQTLIHALSKRDRVNEALKLLEEMFLMGCLPDVDTFNDVIYGL 288

Query: 548 ADDGMTEEAYKLWQKLI 564
                  E  KL  +++
Sbjct: 289 CRLNRIHEGAKLVDRML 305


>gi|449495714|ref|XP_004159923.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 260/516 (50%), Gaps = 26/516 (5%)

Query: 84  VLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEK-------TNNKILQNFCSRGKLTDA 136
           VL+ N  L  +  TK+S    +  ++G F E  E        T N +++ FC+ G L   
Sbjct: 167 VLSYNAILDAVIRTKQS----VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222

Query: 137 SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGG 196
                 M R   +P+      +I    ++ +I +A K+L++M + G  P+ I+YN+++ G
Sbjct: 223 LXFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           LC+ GQ++    +L+EMS     PD +T+NT++    + G F QA+    + ++ G  P 
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           ++TYT LI  +CK   + RA+E LD M   G  P+  TY +L++   +QG    A  ++ 
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            ++  G  P  ITYN L++     G  +    +L  M E    P V +Y+ +I+G C+  
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +++A     +MV+K   PD+ TY++++  LCK+  L E   L   +      P  +TY 
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL------ 490
           +LI+    +G ++KA+ L+ +M++ G SPD +T+  LI GF +  + +EA  LL      
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582

Query: 491 ----KEIGKRG-----NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
                EI         N +   +   ++ G C    ++ A +VLE M+   YK ++ V++
Sbjct: 583 ESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
            I+   +  G  E+AY L+++++         T++A
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMA 678



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 237/457 (51%), Gaps = 17/457 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+  +C   K+ +A KL+ +MA +   P+      +I GL R  ++++ S++L+ M
Sbjct: 240 TYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM 299

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                VPD +T+N ++ G C  G    A+ L  EM  +G  P+V+TY T++ +M   G  
Sbjct: 300 SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNL 359

Query: 239 KQAIGFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            +A+ F  DQ+R +G  P   TYT LI+   +Q  + +A +++ +M   G +P I+TYN+
Sbjct: 360 NRAMEFL-DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  C  G+ +DA  ++  ++ RG  P+ ++Y+T++         +   ++   M    
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP V TY+ LI GLCK   +    + F +M+S    PD VTY +++ A C EG L++AL
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI--- 474
           +L   +     SP ++TYN LI+G  K+   ++A  L  +++     P++IT+ TLI   
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598

Query: 475 ------------WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
                        GFC    + EA  +L+ + ++G K+    Y ++IHG  K   ++ A 
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            + + M+ S + P       + K +  +G   E  +L
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQL 695



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 176/367 (47%), Gaps = 23/367 (6%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T   ++  F  +G L  A +++  M      P       LI G   + R+E AS +LQ 
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G +PD ++Y+ ++ G C+  ++  A  L  EM   G  PDV TY+++++ +    +
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +    +++ L  G PP  +TYT LI   C +  + +A+ + D+M  +G SPDIVTYN 
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS---------------RGC 342
           L+N   KQ +  +A  ++  LL     PN ITYNTL+ +  +               +G 
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGL 618

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            +  D++L+ M +  +      YN++I+G  K G +++A N + +M+     P  VT   
Sbjct: 619 MNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMA 678

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL----AKKGCMEKAMVLYGQM 458
           +  +L  EG   E  QLL      +   C IT   L   L    +K+G M+    +   M
Sbjct: 679 LAKSLYHEGKEVELNQLLDY----TLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDM 734

Query: 459 MENGISP 465
             +G+ P
Sbjct: 735 ALSGLLP 741



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 147/279 (52%), Gaps = 1/279 (0%)

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS-LGSRGCWDAV 346
           C      ++ +V    +    + A+ ++N   S G  P  ++YN +L + + ++      
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           + I   M E+  SP V+TYNILI G C  G ++  +  F +M    C P++VTYNT++ A
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLXFFGEMERNGCLPNVVTYNTIIDA 247

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK   + EA +LL L+     +P LI+YN +I+GL ++G M++   +  +M +    PD
Sbjct: 248 YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD 307

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T  TLI G+C      +A+ L  E+ K G       Y  +I+ +CK+  ++ A++ L+
Sbjct: 308 RVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLD 367

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            M      P+   ++T++   +  G  ++AY++ ++++E
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406


>gi|356530056|ref|XP_003533600.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 694

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 137/452 (30%), Positives = 239/452 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T + ++  FC  G++  +  ++  + +    P+      L++GL     ++K+ 
Sbjct: 163 IEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSL 222

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                +V  G   + ++Y  ++ GLCK G+ R AI LL  +      PDV+ YNTI+  +
Sbjct: 223 HFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGL 282

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +    +A  F+ +   +G  P +ITY+ LI   C    +  A  +L++M ++  +PD+
Sbjct: 283 CKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDV 342

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY  L++  CK+GK  +A  ++  +   G++PN +TY+TL+      G      +I   
Sbjct: 343 YTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHA 402

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +   +P+V +YNI+INGLCK   VD A+N   +M+ KN  P+ VTYN+++  LCK G 
Sbjct: 403 MVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGR 462

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +  AL L+  L+       +ITY +L+DGL K   ++KA+ L+ +M E GI P+  T+  
Sbjct: 463 ITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTA 522

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C+  +++ A  L + I  +G  +    Y ++I GLCK   +D A+ +   M  + 
Sbjct: 523 LIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNG 582

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             PD   F  I++ + +    ++A KL  ++I
Sbjct: 583 CIPDAVTFEIIIRSLFEKDENDKAEKLLHEMI 614



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 216/407 (53%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           ++  L+++     A  + + M + G  PD +T ++++   C  GQ+  + ++L ++   G
Sbjct: 138 ILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKLG 197

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P+ I   T+++ +   G+ K+++ F    + +G     ++Y  L+  +CK      AI
Sbjct: 198 YQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCAI 257

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++L  +      PD+V YN++++  CK    ++A      + SRG+ P+ ITY+TL+   
Sbjct: 258 KLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGF 317

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G       +L+ M   + +P V+TY ILI+ LCK G +  A N    M  +  +P++
Sbjct: 318 CLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNV 377

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTY+T++   C  G ++ A Q+ H +  +  +P + +YN +I+GL K   +++AM L  +
Sbjct: 378 VTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLRE 437

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+   + P+ +T+ +LI G C++ ++  A+DL+KE+  RG       Y  ++ GLCK++ 
Sbjct: 438 MLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQN 497

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +D AI +   M     +P+   ++ ++  +      + A KL+Q ++
Sbjct: 498 LDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHIL 544



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 114/378 (30%), Positives = 192/378 (50%), Gaps = 6/378 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L   C  G+   A KL+ ++  R+  PD      +I GL +   + +A      M   G
Sbjct: 243 LLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRG 302

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD ITY+ ++ G C  GQ+  A +LL+EM++    PDV TY  ++  +   GK K+A 
Sbjct: 303 IFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAK 362

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                  ++G  P ++TY+ L++  C    +  A ++   M     +P + +YN ++N  
Sbjct: 363 NLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGL 422

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH---S 359
           CK    D+A+ ++  +L + + PN++TYN+L+  L   G    +   LD+M E  H    
Sbjct: 423 CKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSG---RITSALDLMKELHHRGQP 479

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             V TY  L++GLCK   +D+AI  F +M  +  QP+  TY  ++  LCK   L  A +L
Sbjct: 480 ADVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKL 539

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +    C   + TYN +I GL K+G +++A+ +  +M +NG  PD +T   +I     
Sbjct: 540 FQHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFE 599

Query: 480 ADQVEEAVDLLKEIGKRG 497
            D+ ++A  LL E+  +G
Sbjct: 600 KDENDKAEKLLHEMIAKG 617



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 215/442 (48%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           KIL +         A  L   M  +   PD      LI     + ++  +  VL  ++  
Sbjct: 137 KILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSVLGKILKL 196

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P+TI    ++ GLC +G+++ ++   D++   G + + ++Y T+L  +   G+ + A
Sbjct: 197 GYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCKIGETRCA 256

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           I   +    +   P ++ Y  +I+ +CK   +  A +   +M   G  PD++TY++L+  
Sbjct: 257 IKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICG 316

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G+   A  ++N +  + + P+  TY  L+ +L   G       +L +M +    P 
Sbjct: 317 FCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPN 376

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TY+ L++G C  G V  A   F+ MV     P + +YN ++  LCK   ++EA+ LL 
Sbjct: 377 VVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVDEAMNLLR 436

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +   +  P  +TYN+LIDGL K G +  A+ L  ++   G   D IT+ +L+ G C+  
Sbjct: 437 EMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQ 496

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            +++A+ L  ++ +RG +     Y  +I GLCK  ++  A ++ + ++      D   ++
Sbjct: 497 NLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYN 556

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
            ++  +  +GM +EA  +  K+
Sbjct: 557 VMIGGLCKEGMLDEALAMKSKM 578



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 210/412 (50%), Gaps = 8/412 (1%)

Query: 123 ILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +++  C +G++  +    D ++A+  Q+    +   L+ GL +I     A K+L+++   
Sbjct: 208 LMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYG-TLLNGLCKIGETRCAIKLLRMIEDR 266

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
              PD + YN ++ GLCK   +  A     EM+  G  PDVITY+T++      G+   A
Sbjct: 267 STRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGA 326

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
                +   K   P + TYTILI+ +CK+  +  A  +L  M  EG  P++VTY++L++ 
Sbjct: 327 FSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDG 386

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS-- 359
            C  G+  +A  + + ++   + P+  +YN +++ L  +G   +VD+ ++++ E  H   
Sbjct: 387 YCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGL-CKG--KSVDEAMNLLREMLHKNV 443

Query: 360 -PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TYN LI+GLCK G +  A++   ++  +    D++TY ++L  LCK   L++A+ 
Sbjct: 444 VPNTVTYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIA 503

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P   TY  LIDGL K   ++ A  L+  ++  G   D  T+  +I G C
Sbjct: 504 LFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLC 563

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           +   ++EA+ +  ++   G       + ++I  L +  + D A ++L  MI+
Sbjct: 564 KEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIA 615



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/361 (28%), Positives = 185/361 (51%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +  A++  + M +    P +I +  IL ++     F  AI   K    KG  P L+T +I
Sbjct: 113 VHDAVSQFNGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSI 172

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI   C    +A +  VL  +   G  P+ +   +L+   C +G+   ++   + ++++G
Sbjct: 173 LINCFCHLGQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQG 232

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            + N ++Y TLL+ L   G      K+L ++ + S  P V  YN +I+GLCK  LV+ A 
Sbjct: 233 FQMNQVSYGTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAY 292

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           + + +M S+   PD++TY+T++   C  G L  A  LL+ +   + +P + TY  LID L
Sbjct: 293 DFYTEMNSRGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDAL 352

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+G +++A  L G M + G+ P+ +T+ TL+ G+C   +V  A  +   + +       
Sbjct: 353 CKEGKLKEAKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSV 412

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            +Y ++I+GLCK K VD A+ +L  M+     P+   +++++  +   G    A  L ++
Sbjct: 413 CSYNIMINGLCKGKSVDEAMNLLREMLHKNVVPNTVTYNSLIDGLCKSGRITSALDLMKE 472

Query: 563 L 563
           L
Sbjct: 473 L 473



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 149/320 (46%)

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P +I +  ++  + K      AI +   M ++G  PD+VT + L+N  C  G+   +  V
Sbjct: 130 PSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHLGQMAFSFSV 189

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +  +L  G +PN+I   TL+  L  +G         D +          +Y  L+NGLCK
Sbjct: 190 LGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSYGTLLNGLCK 249

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G    AI     +  ++ +PD+V YNT++  LCK+ ++NEA      +N     P +IT
Sbjct: 250 IGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNSRGIFPDVIT 309

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y+TLI G    G +  A  L  +M    I+PD  T+  LI   C+  +++EA +LL  + 
Sbjct: 310 YSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKEAKNLLGVMT 369

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           K G K     Y  ++ G C   +V  A Q+   M+ +   P    ++ ++  +      +
Sbjct: 370 KEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEVNPSVCSYNIMINGLCKGKSVD 429

Query: 555 EAYKLWQKLIEWKVFEKGTT 574
           EA  L ++++   V     T
Sbjct: 430 EAMNLLREMLHKNVVPNTVT 449



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 98/408 (24%), Positives = 189/408 (46%), Gaps = 26/408 (6%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G VP+ +T ++++  L   GQ+  + ++L ++   G +P+ IT  T+++     G+ + A
Sbjct: 6   GIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMK-----GETRCA 60

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCG---------------------IARAIEVL 280
           I   +    +   P +   + L   +                          +  A+   
Sbjct: 61  IKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQF 120

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           + M +   +P I+ +  ++    K   +  A+ +   +  +G+EP+ +T + L++     
Sbjct: 121 NGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHL 180

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G       +L  + +  + P       L+ GLC  G V ++++  +++V++  Q + V+Y
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSY 240

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
            T+L  LCK G    A++LL ++   S  P ++ YNT+IDGL K   + +A   Y +M  
Sbjct: 241 GTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNS 300

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            GI PD IT+ TLI GFC A Q+  A  LL E+  +        Y ++I  LCK  K+  
Sbjct: 301 RGIFPDVITYSTLICGFCLAGQLMGAFSLLNEMTLKNINPDVYTYTILIDALCKEGKLKE 360

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           A  +L +M     KP+   +ST++      G    A +++  +++ +V
Sbjct: 361 AKNLLGVMTKEGVKPNVVTYSTLMDGYCLVGEVHNAKQIFHAMVQTEV 408



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 72/304 (23%), Positives = 142/304 (46%), Gaps = 20/304 (6%)

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
           A +G  P++VT + L+N     G+   +  V+  +L  G +PNSIT  TL+   G   C 
Sbjct: 3   AAKGIVPNLVTLSILINCLRHLGQMAFSFSVLGKILKLGYQPNSITLTTLMK--GETRCA 60

Query: 344 DAVDKILD---------IMNEASHS---------PTVFTYNILINGLCKYGLVDRAINSF 385
             + ++++         + +  SHS            F +         + +V  A++ F
Sbjct: 61  IKLPRMIEDRSTRPLMWLSSSLSHSIPNFPPFLPNPTFPFYFHSQPPSIHDVVHDAVSQF 120

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           N M+     P I+ +  +LG+L K      A+ L   +      P L+T + LI+     
Sbjct: 121 NGMLLMRNTPSIIEFGKILGSLVKMKHFPTAISLSKQMEVKGIEPDLVTLSILINCFCHL 180

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G M  +  + G++++ G  P+ I   TL+ G C   +V++++    ++  +G +M   +Y
Sbjct: 181 GQMAFSFSVLGKILKLGYQPNTIILTTLMKGLCLKGEVKKSLHFHDKVVAQGFQMNQVSY 240

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +++GLCK  +   AI++L ++     +PD  +++TI+  +  D +  EAY  + ++  
Sbjct: 241 GTLLNGLCKIGETRCAIKLLRMIEDRSTRPDVVMYNTIIDGLCKDKLVNEAYDFYTEMNS 300

Query: 566 WKVF 569
             +F
Sbjct: 301 RGIF 304



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/137 (32%), Positives = 71/137 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L   C    L  A  L   M  R   P+ +    LI GL +  R++ A K+ 
Sbjct: 481 DVITYTSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGLCKGARLKNAQKLF 540

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q +++ G   D  TYN+M+GGLCK G +  A+A+  +M  +GC PD +T+  I+R++F+ 
Sbjct: 541 QHILVKGCCIDVYTYNVMIGGLCKEGMLDEALAMKSKMEDNGCIPDAVTFEIIIRSLFEK 600

Query: 236 GKFKQAIGFWKDQLRKG 252
            +  +A     + + KG
Sbjct: 601 DENDKAEKLLHEMIAKG 617



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 54/197 (27%), Positives = 92/197 (46%), Gaps = 12/197 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G++T A  L+  +  R Q  D     +L+ GL +   ++KA  +   M
Sbjct: 449 TYNSLIDGLCKSGRITSALDLMKELHHRGQPADVITYTSLLDGLCKNQNLDKAIALFMKM 508

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+  TY  ++ GLCK  ++++A  L   + V GC  DV TYN ++  +   G  
Sbjct: 509 KERGIQPNKYTYTALIDGLCKGARLKNAQKLFQHILVKGCCIDVYTYNVMIGGLCKEGML 568

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC---------- 288
            +A+         GC P  +T+ I+I  + ++    +A ++L +M  +G           
Sbjct: 569 DEALAMKSKMEDNGCIPDAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGLLHFRNFHGER 628

Query: 289 SPDIVTYNSLVNFSCKQ 305
           SP  VT   +VNF  K+
Sbjct: 629 SP--VTNKVIVNFHEKE 643


>gi|297721877|ref|NP_001173302.1| Os03g0201300 [Oryza sativa Japonica Group]
 gi|108706707|gb|ABF94502.1| salt-inducible protein, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255674288|dbj|BAH92030.1| Os03g0201300 [Oryza sativa Japonica Group]
          Length = 796

 Score =  233 bits (594), Expect = 2e-58,   Method: Compositional matrix adjust.
 Identities = 132/451 (29%), Positives = 238/451 (52%), Gaps = 1/451 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C +G L +A  L+  M R    P       L+    R+  I++A+KV+
Sbjct: 242 DAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVV 301

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFD 234
           + M   G  PD  TYN++  GLC+ G++  A  L DEM  +S   PDV+TYNT++   F 
Sbjct: 302 ESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFK 361

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
                 A+   ++   KG  P L+T+ I+++ +CK+  +  A+  L+ +A EG +PD++T
Sbjct: 362 WRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVIT 421

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L++  CK G    A  +++ ++ +G++ ++ T NT+L++L     ++  +++L    
Sbjct: 422 YNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPP 481

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P   +Y  ++    K    + A+  ++QM+ +   P I TYNT++  LC+   L 
Sbjct: 482 QRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLK 541

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA+  L+ L      P   TYN +I    K+G +E A   + +M+EN   PD +T  TL+
Sbjct: 542 EAIDKLNELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLM 601

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C   ++++A+ L +   ++G K+    Y  +I  +CK   VD A+   + M     +
Sbjct: 602 NGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQ 661

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   ++ ++  +++ G +EEA+ +  KL +
Sbjct: 662 PDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/415 (30%), Positives = 207/415 (49%), Gaps = 2/415 (0%)

Query: 153 HFCINL-IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD 211
           H+  NL +        +  A   L  M   G  PD +TYN ++   C++G +  A ALL 
Sbjct: 208 HYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLA 267

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
            M   G  P   TYNT++      G  KQA    +     G  P L TY +L   +C+  
Sbjct: 268 RMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAG 327

Query: 272 GIARAIEVLDDMA-IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
            +  A  + D+M  +    PD+VTYN+LV+   K     DA+ ++  +  +G++P  +T+
Sbjct: 328 KVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTH 387

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N ++ SL   G  +     L+ + E   +P V TYN LI+  CK G V +A    ++MV 
Sbjct: 388 NIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVG 447

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           K  + D  T NTVL  LCK     +A +LLH        P  ++Y T++    K+   E 
Sbjct: 448 KGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEP 507

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+ L+ QM+E  + P   T+ TLI G CR ++++EA+D L E+ ++G     + Y ++IH
Sbjct: 508 ALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNIIIH 567

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             CK   ++ A +    M+ + +KPD    +T++  +   G  ++A KL++  +E
Sbjct: 568 AYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 194/404 (48%), Gaps = 9/404 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T+N ++++ C  GKL +A   ++ +A     PD      LI    +   + KA  ++  M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G   DT T N ++  LCK  +   A  LL      G  PD ++Y T++   F     
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A+  W   + +   P + TY  LI+ +C+   +  AI+ L+++  +G  PD  TYN +
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNII 565

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G  ++A    N ++    +P+ +T NTL++ L   G  D   K+ +   E   
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK 625

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              V TYN LI  +CK G VD A++ F+ M  K  QPD  TYN VL AL + G   EA  
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685

Query: 419 LLHLLNGS-----SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +LH L  S     S +  L+  ++  +   K+   +       +  +N +     T+   
Sbjct: 686 MLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALE----TYMER 741

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           + G C   Q++EA  +L E+ ++G  + +S Y  ++ GL K +K
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKRQK 785



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 175/382 (45%), Gaps = 36/382 (9%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P+  T+N ++ T    G    A+         G  P  +TY  L+   C++  +  A  +
Sbjct: 206 PNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 265

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L  M  +G +P   TYN+LV+   + G    A  V+ ++ + G EP+  TYN L   L  
Sbjct: 266 LARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQ 325

Query: 340 RGCWDAVDKILDIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
            G  D   ++ D M   S + P V TYN L++   K+     A+    +M  K  +P +V
Sbjct: 326 AGKVDEAFRLKDEMERLSTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLV 385

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           T+N V+ +LCKEG L EAL  L  +     +P +ITYNTLID   K G + KA  L  +M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG--------------------- 497
           +  G+  D  T  T+++  C+  + E+A +LL    +RG                     
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 498 -------NKMRN-------SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
                  ++M         S Y  +I GLC+ +++  AI  L  ++     PD+T ++ I
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNELVEKGLVPDETTYNII 565

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           +     +G  E A++   K++E
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVE 587



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 142/295 (48%), Gaps = 1/295 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE +   ++  +        A +L D M  R  IP       LI+GL R++R+++A   L
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +V  G VPD  TYN+++   CK G + +A    ++M  +  +PDV+T NT++  +  +
Sbjct: 548 NELVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A+  ++  + KG    +ITY  LI+ +CK   +  A+   DDM ++G  PD  TY
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMN 354
           N +++   + G+ ++A  +++ L   G    S     L  S        +   K     +
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESS 727

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           E +    + TY   +NGLC  G +  A    ++M+ K    D  TY T++  L K
Sbjct: 728 EKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIK 782



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/361 (24%), Positives = 155/361 (42%), Gaps = 73/361 (20%)

Query: 287 GCSPDIVTYNSLVN-FSCKQGKYDDAVL-VINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
           G  P +   N++++  S        A L V  +L+   + PN  T+N L+H+  S+G   
Sbjct: 166 GVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNLLVHTHCSKGTLA 225

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA----------------------I 382
                L  M     SP   TYN L+N  C+ G++  A                      +
Sbjct: 226 DALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLV 285

Query: 383 NSFNQ-------------MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG-SSC 428
           ++F +             M +   +PD+ TYN +   LC+ G ++EA +L   +   S+ 
Sbjct: 286 SAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVGLCQAGKVDEAFRLKDEMERLSTA 345

Query: 429 SPCLITYNTLIDG-----------------------------------LAKKGCMEKAMV 453
            P ++TYNTL+D                                    L K+G +E+A+ 
Sbjct: 346 LPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALG 405

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
              ++ E G++PD IT+ TLI  +C+A  V +A  L+ E+  +G KM       V++ LC
Sbjct: 406 KLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLC 465

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
           K K+ + A ++L       + PD+  + T++     +   E A +LW ++IE K+    +
Sbjct: 466 KMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSIS 525

Query: 574 T 574
           T
Sbjct: 526 T 526



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 69/235 (29%), Positives = 110/235 (46%), Gaps = 19/235 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T N I+  +C  G L +A +  + M   +  PD   C  L+ GL    +++KA K+ 
Sbjct: 558 DETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLF 617

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  V  G   D ITYN ++  +CK G + +A+   D+M V G +PD  TYN +L  + + 
Sbjct: 618 ESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEA 677

Query: 236 GKFKQAIGFWKDQLRKG-------CPPYLITYTILIEQVCKQC---GIARAIEVLDDMAI 285
           G+ ++A          G       CP  L+  +   E   K+      A + E   D A+
Sbjct: 678 GRSEEAHNMLHKLADSGKLSQSFACP--LLKPSSADEADVKEHEGKPEAESSEKAQDNAL 735

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           E       TY   +N  C  G+  +A  V++ ++ +GM  +S TY TL+  L  R
Sbjct: 736 E-------TYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDSSTYITLMEGLIKR 783



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 58/214 (27%), Positives = 105/214 (49%), Gaps = 16/214 (7%)

Query: 333 LLHSLGSR-GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           LLHSL  R G   ++     +++  S SP+               L   +++ F  ++  
Sbjct: 157 LLHSLRRRRGVRPSLQAANAVLSALSRSPST--------------LPQASLDVFRSLIEL 202

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              P+  T+N ++   C +G L +AL  L  + G   SP  +TYNTL++   +KG + +A
Sbjct: 203 RLHPNHYTFNLLVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEA 262

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             L  +M  +GI+P   T+ TL+  F R   +++A  +++ +   G +     Y ++  G
Sbjct: 263 RALLARMKRDGIAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAVG 322

Query: 512 LCKSKKVDMAIQVLELMIS-SRYKPDDTVFSTIV 544
           LC++ KVD A ++ + M   S   PD   ++T+V
Sbjct: 323 LCQAGKVDEAFRLKDEMERLSTALPDVVTYNTLV 356


>gi|449438681|ref|XP_004137116.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Cucumis sativus]
          Length = 749

 Score =  233 bits (593), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 147/516 (28%), Positives = 260/516 (50%), Gaps = 26/516 (5%)

Query: 84  VLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEK-------TNNKILQNFCSRGKLTDA 136
           VL+ N  L  +  TK+S    +  ++G F E  E        T N +++ FC+ G L   
Sbjct: 167 VLSYNAILDAVIRTKQS----VKIAEGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMG 222

Query: 137 SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGG 196
                 M R   +P+      +I    ++ +I +A K+L++M + G  P+ I+YN+++ G
Sbjct: 223 LFFFGEMERNGCLPNVVTYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVING 282

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           LC+ GQ++    +L+EMS     PD +T+NT++    + G F QA+    + ++ G  P 
Sbjct: 283 LCREGQMKETSEILEEMSKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPN 342

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           ++TYT LI  +CK   + RA+E LD M   G  P+  TY +L++   +QG    A  ++ 
Sbjct: 343 VVTYTTLINSMCKAGNLNRAMEFLDQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMK 402

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            ++  G  P  ITYN L++     G  +    +L  M E    P V +Y+ +I+G C+  
Sbjct: 403 EMVENGFTPTIITYNALINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQ 462

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +++A     +MV+K   PD+ TY++++  LCK+  L E   L   +      P  +TY 
Sbjct: 463 ELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYT 522

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL------ 490
           +LI+    +G ++KA+ L+ +M++ G SPD +T+  LI GF +  + +EA  LL      
Sbjct: 523 SLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYE 582

Query: 491 ----KEIGKRG-----NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
                EI         N +   +   ++ G C    ++ A +VLE M+   YK ++ V++
Sbjct: 583 ESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYN 642

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
            I+   +  G  E+AY L+++++         T++A
Sbjct: 643 VIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMA 678



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 136/457 (29%), Positives = 237/457 (51%), Gaps = 17/457 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+  +C   K+ +A KL+ +MA +   P+      +I GL R  ++++ S++L+ M
Sbjct: 240 TYNTIIDAYCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEM 299

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                VPD +T+N ++ G C  G    A+ L  EM  +G  P+V+TY T++ +M   G  
Sbjct: 300 SKRRYVPDRVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNL 359

Query: 239 KQAIGFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            +A+ F  DQ+R +G  P   TYT LI+   +Q  + +A +++ +M   G +P I+TYN+
Sbjct: 360 NRAMEFL-DQMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNA 418

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  C  G+ +DA  ++  ++ RG  P+ ++Y+T++         +   ++   M    
Sbjct: 419 LINGHCILGRMEDASGLLQEMIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKG 478

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP V TY+ LI GLCK   +    + F +M+S    PD VTY +++ A C EG L++AL
Sbjct: 479 ISPDVATYSSLIQGLCKQRRLGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKAL 538

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI--- 474
           +L   +     SP ++TYN LI+G  K+   ++A  L  +++     P++IT+ TLI   
Sbjct: 539 RLHDEMIQKGFSPDIVTYNVLINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNC 598

Query: 475 ------------WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
                        GFC    + EA  +L+ + ++G K+    Y ++IHG  K   ++ A 
Sbjct: 599 NNLEFKSALALMKGFCMKGLMNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAY 658

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            + + M+ S + P       + K +  +G   E  +L
Sbjct: 659 NLYKEMLHSGFAPHSVTIMALAKSLYHEGKEVELNQL 695



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 176/367 (47%), Gaps = 23/367 (6%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T   ++  F  +G L  A +++  M      P       LI G   + R+E AS +LQ 
Sbjct: 379 RTYTTLIDGFSQQGFLKQAYQIMKEMVENGFTPTIITYNALINGHCILGRMEDASGLLQE 438

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G +PD ++Y+ ++ G C+  ++  A  L  EM   G  PDV TY+++++ +    +
Sbjct: 439 MIERGFIPDVVSYSTIISGFCRNQELEKAFQLKVEMVAKGISPDVATYSSLIQGLCKQRR 498

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +    +++ L  G PP  +TYT LI   C +  + +A+ + D+M  +G SPDIVTYN 
Sbjct: 499 LGEVCDLFQEMLSLGLPPDEVTYTSLINAYCIEGDLDKALRLHDEMIQKGFSPDIVTYNV 558

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS---------------RGC 342
           L+N   KQ +  +A  ++  LL     PN ITYNTL+ +  +               +G 
Sbjct: 559 LINGFNKQSRTKEAKRLLLKLLYEESVPNEITYNTLIDNCNNLEFKSALALMKGFCMKGL 618

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            +  D++L+ M +  +      YN++I+G  K G +++A N + +M+     P  VT   
Sbjct: 619 MNEADRVLESMLQKGYKLNEEVYNVIIHGHSKVGNIEKAYNLYKEMLHSGFAPHSVTIMA 678

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL----AKKGCMEKAMVLYGQM 458
           +  +L  EG   E  QLL      +   C IT   L   L    +K+G M+    +   M
Sbjct: 679 LAKSLYHEGKEVELNQLLDY----TLKSCRITEAALAKVLIGINSKEGNMDAVFNVLKDM 734

Query: 459 MENGISP 465
             +G+ P
Sbjct: 735 ALSGLLP 741



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 79/279 (28%), Positives = 147/279 (52%), Gaps = 1/279 (0%)

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS-LGSRGCWDAV 346
           C      ++ +V    +    + A+ ++N   S G  P  ++YN +L + + ++      
Sbjct: 128 CKSSSAVFDLVVKSCARVNLINKALSIVNLAKSYGFMPGVLSYNAILDAVIRTKQSVKIA 187

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           + I   M E+  SP V+TYNILI G C  G ++  +  F +M    C P++VTYNT++ A
Sbjct: 188 EGIFKEMVESGVSPNVYTYNILIRGFCTAGNLEMGLFFFGEMERNGCLPNVVTYNTIIDA 247

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK   + EA +LL L+     +P LI+YN +I+GL ++G M++   +  +M +    PD
Sbjct: 248 YCKLRKIGEAFKLLRLMALKGLNPNLISYNVVINGLCREGQMKETSEILEEMSKRRYVPD 307

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T  TLI G+C      +A+ L  E+ K G       Y  +I+ +CK+  ++ A++ L+
Sbjct: 308 RVTFNTLINGYCNVGNFHQALVLHAEMVKNGLSPNVVTYTTLINSMCKAGNLNRAMEFLD 367

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            M      P+   ++T++   +  G  ++AY++ ++++E
Sbjct: 368 QMRDRGLHPNGRTYTTLIDGFSQQGFLKQAYQIMKEMVE 406


>gi|302775294|ref|XP_002971064.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
 gi|300161046|gb|EFJ27662.1| hypothetical protein SELMODRAFT_95253 [Selaginella moellendorffii]
          Length = 814

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 138/455 (30%), Positives = 237/455 (52%), Gaps = 9/455 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N ++      G   +A K++D M  +  +P       L+  L +   +E+A ++ 
Sbjct: 259 DAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELF 318

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M  SG  P+++ Y  ++ G  K G+++ A +L DEM  +G  PDVIT+  ++  +  +
Sbjct: 319 RVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKS 378

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G F+QA   +++ +R GC P ++TYT +I+ + K   +A A  ++  M   GC PD VTY
Sbjct: 379 GNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTY 438

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L++  CK G+ D+A  +++ L      PN   Y++L++ L   G   +V+K LD + E
Sbjct: 439 ICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGG---SVEKTLDDLFE 495

Query: 356 ASHSPTVFTYNIL----INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK-- 409
            S +        L    I GLCK G +D A   F +MVS+ C+PD  TYN ++  LC+  
Sbjct: 496 QSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSR 555

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           E  +  A  LLH L      P  +TY  L  GL K G +++A+ +  +    G + D + 
Sbjct: 556 ENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNADVVA 615

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  L  G C   QV+ AV L +E+ ++G     +AY  +I+GL K KK++ A +  + MI
Sbjct: 616 YTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKVKKLEDACKFFDEMI 675

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               KP    ++ +V+ +   G  +EA+  ++ ++
Sbjct: 676 GKGQKPTVATYTALVQALCHAGNVDEAFHRFESML 710



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 139/487 (28%), Positives = 230/487 (47%), Gaps = 41/487 (8%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E T   ++ + C  G L  A +L  +MA     P+     +LI G  +  R+++A  +  
Sbjct: 295 EVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFD 354

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            MV +G  PD IT+ +M+ GLCK G    A    +EM   GC+P+V+TY TI++ +   G
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +   A    K  +  GC P  +TY  L++  CK   +  A ++LD++     SP++  Y+
Sbjct: 415 RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474

Query: 297 SLVN---------------FS---------------------CKQGKYDDAVLVINNLLS 320
           SLVN               F                      CK G+ D+A  +   ++S
Sbjct: 475 SLVNGLCDGGSVEKTLDDLFEQSKAAAETLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE---ASHSPTVFTYNILINGLCKYGL 377
            G +P++ TYN L++ L  R   + V++   ++++     + P   TY  L  GLCK G 
Sbjct: 535 EGCKPDATTYNILINGL-CRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGE 593

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           VDRA+    +  S+    D+V Y  +   LC +G ++ A+ L   +     +P    Y  
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCC 653

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +I+GL K   +E A   + +M+  G  P   T+  L+   C A  V+EA    + +  RG
Sbjct: 654 IINGLIKVKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARG 713

Query: 498 NKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
             + +   Y  +IHG CK+ KVD A+++ E MIS    P     +++   +   G TE+A
Sbjct: 714 ELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKA 773

Query: 557 YKLWQKL 563
            +L Q++
Sbjct: 774 QELLQEM 780



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 235/487 (48%), Gaps = 9/487 (1%)

Query: 82  SHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           SHV AV   LR L +T  +      + +    ++D  T N ++    +    +    + +
Sbjct: 87  SHVAAV---LRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHE 143

Query: 142 IMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
            M +    P+ F F I LIR   R  R + A    +IM      PD  T+ ++V  LCK 
Sbjct: 144 EMLKAGIAPNTFSFNI-LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKA 202

Query: 201 GQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
           G    A  +  EM   G   PD   +  ++RT+    + K+A   +    + G PP  I 
Sbjct: 203 GMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIA 262

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           Y  +I+ + K      A++VLD+M  + C P  VTY  LVN  CK G  + A  +   + 
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           + G  PNS+ Y +L+H     G       + D M EA + P V T+ ++I+GLCK G  +
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +A  SF +M+   C+P++VTY T++  L K G +  A +++  +    C P  +TY  L+
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLL 442

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DG  K G +++A  L  ++ +   SP+   + +L+ G C    VE+ +D L E  K   +
Sbjct: 443 DGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDGGSVEKTLDDLFEQSKAAAE 502

Query: 500 MRNSAYRL-VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV--ADDGMTEEA 556
             +      +I GLCK+ ++D A ++ + M+S   KPD T ++ ++  +  + +   E A
Sbjct: 503 TLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERA 562

Query: 557 YKLWQKL 563
           + L   L
Sbjct: 563 FALLHDL 569



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 214/453 (47%), Gaps = 8/453 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T+  ++   C  G    A+K  + M R    P+      +I+GL +I R+  A +++
Sbjct: 364 DVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIM 423

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  PD++TY  ++ G CK G++  A  LLDE+      P++  Y++++  + D 
Sbjct: 424 KGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVNGLCDG 483

Query: 236 GKFKQAIGFWKDQLRKGCP---PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           G  ++ +    +Q +       P L    I+   +CK   +  A  +   M  EGC PD 
Sbjct: 484 GSVEKTLDDLFEQSKAAAETLDPGLCCSIIV--GLCKTGRLDEACRIFQRMVSEGCKPDA 541

Query: 293 VTYNSLVNFSCK--QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            TYN L+N  C+  + + + A  ++++L   G  P+++TY  L   L   G  D   K+L
Sbjct: 542 TTYNILINGLCRSRENRVERAFALLHDLEKVGYLPDAVTYTPLCIGLCKIGEVDRAVKML 601

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           +  +    +  V  Y  L  GLC  G VDRA++ F +MV +   PD   Y  ++  L K 
Sbjct: 602 EEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKV 661

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-ISPDDIT 469
             L +A +    + G    P + TY  L+  L   G +++A   +  M+  G +    + 
Sbjct: 662 KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFESMLARGELVGSVMI 721

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  LI GFC+A +V+ A+ L +++  RGN         +  GL +S K + A ++L+ M 
Sbjct: 722 YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           +    P    F+ I+  +     + +  KL Q+
Sbjct: 782 AGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 155/327 (47%), Gaps = 38/327 (11%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG-SRGCWDA 345
           G   D+ TYN L+N    +  Y     +   +L  G+ PN+ ++N L+ S   +R   DA
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS--------------- 390
           V    +IM      P + T+ IL++ LCK G+ ++A   F++M++               
Sbjct: 174 V-TCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232

Query: 391 -------------------KNC--QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
                              + C   PD + YNT++  L K G   EAL++L  +   +C 
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  +TY  L++ L K G +E+A  L+  M  +G  P+ + + +LI GF ++ +++EA  L
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             E+ + G +     + ++I GLCKS   + A +  E M+    KP+   ++TI++ ++ 
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTTLL 576
            G    A+++ + +I    F    T +
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYI 439


>gi|255547572|ref|XP_002514843.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545894|gb|EEF47397.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 594

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 228/418 (54%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G++ +A + +D +  R   P  +    ++ GL +I +   A   ++ M
Sbjct: 176 TFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKM 235

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V     P+ ++Y++++  LCK   +  A+ L   M   G  P V+TYN+++  M ++G++
Sbjct: 236 VELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQW 295

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           KQA   +K+ L     P ++T++IL++ +CK+  +  A+ V   M      PDIVTY+SL
Sbjct: 296 KQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSL 355

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK   + ++  ++N +LSR + P+ +T++  +     +G       I+++M E   
Sbjct: 356 IHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGL 415

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TYN L++G C +  +D A   F+ MV+K C PD+++YN ++   CK   ++EA Q
Sbjct: 416 RPNVVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQ 475

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   ++    +P  IT+ TLI GL + G    A  L+ +M  +G  PD IT+ TL+ GFC
Sbjct: 476 LFDEMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFC 535

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +   ++EA+ L + + K   K  +   ++++ G+CK+ K++ A ++   +     +PD
Sbjct: 536 KHGHLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPD 593



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 216/407 (53%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
            LI GL    RI +A + L  ++  G  P   T+ M+V GLCK G+  +AI  + +M   
Sbjct: 179 TLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVEL 238

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
            CEP+V++Y+ I+ ++  N    +A+  +      G  P ++TY  LI  +C      +A
Sbjct: 239 DCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQA 298

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +  +M      PD+VT++ LV+  CK+G   +A+ V   ++   MEP+ +TY++L+H 
Sbjct: 299 SILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHG 358

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           +     W     +L+ M   +  P V T++I ++  CK G+V  A +  N M+ +  +P+
Sbjct: 359 VCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPN 418

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +VTYN+++   C    ++EA ++  ++    C+P +++YN LI G  K   +++A  L+ 
Sbjct: 419 VVTYNSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFD 478

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M   G++P+ ITH TLI G C+A +   A +L K++G  G       Y  ++ G CK  
Sbjct: 479 EMSHKGLTPNSITHTTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHG 538

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +D A+ + E +  S+ KP+  +   ++  +   G  E+A +L+  L
Sbjct: 539 HLDEALALFEALKKSQLKPNHVICKILLGGMCKAGKLEDAKELFSSL 585



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 219/406 (53%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI  L  +  +     VL  +   G  P  IT+N ++ GLC  G+I  A+  LD +   G
Sbjct: 145 LINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRG 204

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P V T+  I+  +   GK   AI + K  +   C P +++Y+I+I+ +CK   +  A+
Sbjct: 205 YQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAV 264

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++   M   G SP +VTYNSL+   C  G++  A ++   +L   M+P+ +T++ L+ +L
Sbjct: 265 DLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDAL 324

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G       +   M + +  P + TY+ LI+G+CK  L   +    N+M+S+N +PD+
Sbjct: 325 CKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDV 384

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VT++  +   CK+GM++EA  +++L+      P ++TYN+L+DG      M++A  ++  
Sbjct: 385 VTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLHSQMDEARKVFDI 444

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+  G +PD +++  LI G+C++++++EA  L  E+  +G    +  +  +I GLC++ +
Sbjct: 445 MVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITHTTLISGLCQAGR 504

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              A ++ + M S    PD   +ST++      G  +EA  L++ L
Sbjct: 505 PYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEAL 550



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 113/453 (24%), Positives = 231/453 (50%), Gaps = 3/453 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLT---DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
             D   +N  +++ C  G  +   DA    + M   N  P       L+  L+R+   + 
Sbjct: 63  HKDASFDNFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDS 122

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
              + + M   G      T  +++  LC    +    ++L ++   G +P +IT+NT++ 
Sbjct: 123 VVSIYRKMEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLIN 182

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +   G+  +A+      + +G  P + T+T+++  +CK    + AI  +  M    C P
Sbjct: 183 GLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTMIVNGLCKIGKTSAAIVWMKKMVELDCEP 242

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           ++V+Y+ +++  CK    ++AV +  ++ S G+ P  +TYN+L++ + + G W     + 
Sbjct: 243 EVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIGISPTVVTYNSLIYGMCNSGQWKQASILF 302

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M E +  P V T++IL++ LCK G+V  A++ F +M+    +PDIVTY++++  +CK 
Sbjct: 303 KEMLEWNMKPDVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKS 362

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
            +  E+  LL+ +   +  P ++T++  +D   KKG + +A  +   M+E G+ P+ +T+
Sbjct: 363 SLWKESSTLLNEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTY 422

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +L+ G+C   Q++EA  +   +  +G      +Y ++I G CKS+++D A Q+ + M  
Sbjct: 423 NSLMDGYCLHSQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSH 482

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
               P+    +T++  +   G    A +L++K+
Sbjct: 483 KGLTPNSITHTTLISGLCQAGRPYAAKELFKKM 515



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 177/378 (46%), Gaps = 38/378 (10%)

Query: 191 NMMVGGLCKRGQIRS---AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           N  V   CK G   +   A+A  ++M      P +  +N +L  +     +   +  ++ 
Sbjct: 70  NFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
               G    + T TILI  +C    +     VL  +   G  P I+T+N+L+N  C +G+
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGFSVLGKIFKLGFKPSIITFNTLINGLCIEGR 189

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
             +A+  ++ ++SRG                                   + PTV+T+ +
Sbjct: 190 IVEAMEQLDYIMSRG-----------------------------------YQPTVYTHTM 214

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           ++NGLCK G    AI    +MV  +C+P++V+Y+ ++ +LCK  ++NEA+ L + +    
Sbjct: 215 IVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIG 274

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            SP ++TYN+LI G+   G  ++A +L+ +M+E  + PD +T   L+   C+   V EA+
Sbjct: 275 ISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEWNMKPDVVTFSILVDALCKEGVVLEAL 334

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            +  ++ +   +     Y  +IHG+CKS     +  +L  M+S   +PD   FS  V   
Sbjct: 335 SVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLLNEMLSRNIRPDVVTFSIWVDVF 394

Query: 548 ADDGMTEEAYKLWQKLIE 565
              GM  EA  +   +IE
Sbjct: 395 CKKGMVSEAQSIINLMIE 412



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 144/282 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++   C  G + +A  +   M +    PD     +LI G+ +    +++S +L
Sbjct: 313 DVVTFSILVDALCKEGVVLEALSVFGKMIQIAMEPDIVTYSSLIHGVCKSSLWKESSTLL 372

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+     PD +T+++ V   CK+G +  A ++++ M   G  P+V+TYN+++     +
Sbjct: 373 NEMLSRNIRPDVVTFSIWVDVFCKKGMVSEAQSIINLMIERGLRPNVVTYNSLMDGYCLH 432

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A   +   + KGC P +++Y ILI+  CK   I  A ++ D+M+ +G +P+ +T+
Sbjct: 433 SQMDEARKVFDIMVNKGCAPDVLSYNILIKGYCKSERIDEAKQLFDEMSHKGLTPNSITH 492

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++  C+ G+   A  +   + S G  P+ ITY+TLL      G  D    + + + +
Sbjct: 493 TTLISGLCQAGRPYAAKELFKKMGSHGCPPDLITYSTLLSGFCKHGHLDEALALFEALKK 552

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
           +   P      IL+ G+CK G ++ A   F+ +  +  QPD+
Sbjct: 553 SQLKPNHVICKILLGGMCKAGKLEDAKELFSSLSIEELQPDV 594



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 70/274 (25%), Positives = 121/274 (44%), Gaps = 38/274 (13%)

Query: 296 NSLVNFSCKQGKY---DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           N  V   CK G +   DDA+   N ++     P    +N LL +L     +D+V  I   
Sbjct: 70  NFAVRDKCKGGSFSNFDDALAYFNQMVHMNPFPCITQFNQLLAALVRMKHYDSVVSIYRK 129

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M     S +V+T  ILIN LC   LV                       +VLG + K G 
Sbjct: 130 MEFFGVSCSVYTLTILINCLCHLHLVGLGF-------------------SVLGKIFKLGF 170

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
                            P +IT+NTLI+GL  +G + +AM     +M  G  P   TH  
Sbjct: 171 ----------------KPSIITFNTLINGLCIEGRIVEAMEQLDYIMSRGYQPTVYTHTM 214

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++ G C+  +   A+  +K++ +   +    +Y ++I  LCK++ V+ A+ +   M S  
Sbjct: 215 IVNGLCKIGKTSAAIVWMKKMVELDCEPEVVSYSIIIDSLCKNRLVNEAVDLFYHMRSIG 274

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
             P    +++++  + + G  ++A  L+++++EW
Sbjct: 275 ISPTVVTYNSLIYGMCNSGQWKQASILFKEMLEW 308


>gi|334183602|ref|NP_176522.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806282|sp|Q9C8T7.2|PP101_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63330
 gi|332195966|gb|AEE34087.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 559

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 232/447 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC R +++ A  L+  M +    P      +L+ G     RI  A  ++  M
Sbjct: 47  TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 106

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PDTIT+  ++ GL    +   A+AL+D M   GC+P+++TY  ++  +   G  
Sbjct: 107 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 166

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A               ++ +  +I+ +CK   +  A+ +  +M  +G  P++VTY+SL
Sbjct: 167 DLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSL 226

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  G++ DA  ++++++ + + PN +T+N L+ +    G +   +K+ D M + S 
Sbjct: 227 ISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +FTYN LING C +  +D+A   F  MVSK+C PD+ TYNT++   CK   + +  +
Sbjct: 287 DPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTE 346

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   ++        +TY TLI GL   G  + A  ++ QM+ +G+ PD +T+  L+ G C
Sbjct: 347 LFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLC 406

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              ++E+A+++   + K   K+    Y  +I G+CK+ KVD    +   +     KP+  
Sbjct: 407 NNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVV 466

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++T++  +    + +EAY L +K+ E
Sbjct: 467 TYNTMISGLCSKRLLQEAYALLKKMKE 493



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 235/457 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +L  +C   +++DA  L+D M      PD      LI GL   ++  +A  ++  M
Sbjct: 82  TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 141

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+ +TY ++V GLCKRG I  A  LL++M  +  E DV+ +NTI+ ++      
Sbjct: 142 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 201

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+  +K+   KG  P ++TY+ LI  +C     + A ++L DM  +  +P++VT+N+L
Sbjct: 202 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 261

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK+ +A  + ++++ R ++P+  TYN+L++        D   ++ + M     
Sbjct: 262 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 321

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TYN LI G CK   V+     F +M  +    D VTY T++  L  +G  + A +
Sbjct: 322 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 381

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +      P ++TY+ L+DGL   G +EKA+ ++  M ++ I  D   + T+I G C
Sbjct: 382 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 441

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A +V++  DL   +  +G K     Y  +I GLC  + +  A  +L+ M      PD  
Sbjct: 442 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 501

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            ++T+++    DG    + +L +++   +     +T+
Sbjct: 502 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 538



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/421 (28%), Positives = 210/421 (49%), Gaps = 6/421 (1%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M +   +P       L+  + ++ + +    + + M   G   +  TYN+++   C+R Q
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           I  A+ALL +M   G EP ++T +++L       +   A+      +  G  P  IT+T 
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI  +      + A+ ++D M   GC P++VTY  +VN  CK+G  D A  ++N + +  
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVD 379
           +E + + +NT++ SL     +  VD  L++  E       P V TY+ LI+ LC YG   
Sbjct: 181 IEADVVIFNTIIDSLCK---YRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWS 237

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A    + M+ K   P++VT+N ++ A  KEG   EA +L   +   S  P + TYN+LI
Sbjct: 238 DASQLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLI 297

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +G      ++KA  ++  M+     PD  T+ TLI GFC++ +VE+  +L +E+  RG  
Sbjct: 298 NGFCMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLV 357

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +I GL      D A +V + M+S    PD   +S ++  + ++G  E+A ++
Sbjct: 358 GDTVTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEV 417

Query: 560 W 560
           +
Sbjct: 418 F 418



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 202/387 (52%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV S  +P    +N ++  + K  +    I+L ++M   G   ++ TYN ++       +
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A+      ++ G  P ++T + L+   C    I+ A+ ++D M   G  PD +T+ +
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++      K  +AV +++ ++ RG +PN +TY  +++ L  RG  D    +L+ M  A 
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
               V  +N +I+ LCKY  VD A+N F +M +K  +P++VTY++++  LC  G  ++A 
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           QLL  +     +P L+T+N LID   K+G   +A  L+  M++  I PD  T+ +LI GF
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C  D++++A  + + +  +        Y  +I G CKSK+V+   ++   M       D 
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
             ++T+++ +  DG  + A K++++++
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMV 387



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 160/334 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    N I+ + C    + DA  L   M  +   P+     +LI  L    R   AS
Sbjct: 181 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 240

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+     P+ +T+N ++    K G+   A  L D+M     +PD+ TYN+++   
Sbjct: 241 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 300

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   ++  + K C P L TY  LI+  CK   +    E+  +M+  G   D 
Sbjct: 301 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 360

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY +L+      G  D+A  V   ++S G+ P+ +TY+ LL  L + G  +   ++ D 
Sbjct: 361 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 420

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M ++     ++ Y  +I G+CK G VD   + F  +  K  +P++VTYNT++  LC + +
Sbjct: 421 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 480

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           L EA  LL  +      P   TYNTLI    + G
Sbjct: 481 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 514



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 133/279 (47%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P I  +N L++   K  K+D  + +   +   G+  N  TYN L++    R        +
Sbjct: 8   PSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQISLALAL 67

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L  M +  + P++ T + L+NG C    +  A+   +QMV    +PD +T+ T++  L  
Sbjct: 68  LGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFL 127

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
               +EA+ L+  +    C P L+TY  +++GL K+G ++ A  L  +M    I  D + 
Sbjct: 128 HNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVI 187

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             T+I   C+   V++A++L KE+  +G +     Y  +I  LC   +   A Q+L  MI
Sbjct: 188 FNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMI 247

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +  P+   F+ ++     +G   EA KL   +I+  +
Sbjct: 248 EKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSI 286



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 86/181 (47%)

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           MV     P I  +N +L A+ K    +  + L   +     S  L TYN LI+   ++  
Sbjct: 1   MVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRLGISHNLYTYNILINCFCRRSQ 60

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +  A+ L G+MM+ G  P  +T  +L+ G+C   ++ +AV L+ ++ + G +     +  
Sbjct: 61  ISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTT 120

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +IHGL    K   A+ +++ M+    +P+   +  +V  +   G  + A+ L  K+   K
Sbjct: 121 LIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAK 180

Query: 568 V 568
           +
Sbjct: 181 I 181


>gi|297727505|ref|NP_001176116.1| Os10g0368800 [Oryza sativa Japonica Group]
 gi|20043026|gb|AAM08834.1|AC113335_14 Putative PPR-repeat protein [Oryza sativa Japonica Group]
 gi|22830267|gb|AAN08650.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|31431615|gb|AAP53366.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|255679344|dbj|BAH94844.1| Os10g0368800 [Oryza sativa Japonica Group]
          Length = 913

 Score =  232 bits (592), Expect = 3e-58,   Method: Compositional matrix adjust.
 Identities = 139/483 (28%), Positives = 238/483 (49%), Gaps = 32/483 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI-RGLIRIDRIEKA 171
           V+   ++ N +L          DA  L   M  R+++P   F   +  R L R+ R ++A
Sbjct: 135 VQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEA 194

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +L+ M   G VPD + Y  ++  LC +G +  A  LL+EM + GC  DV T++ ++R 
Sbjct: 195 LALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRG 254

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK---------------------- 269
           M   G+ ++A       + KGC P ++TY  L++ +C+                      
Sbjct: 255 MCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLF 314

Query: 270 ---------QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
                    +  +A A E+ + M ++GC PD  TY+ L++  CK G+   AV ++  +  
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK 374

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +G  PN +TY  +LHS    G WD    +L+ M+    +     YN +I  LCK G +D 
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+    +M S+ C PDI +YNT++  LC    + EA  +   L         ITYNT+I 
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
            L + G  + A+ L  +M+ +G S D +++  LI   C+   V+ ++ LL+E+ ++G K 
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            N +Y ++I  LCK ++V  A+++ + M++    PD   ++T++  +   G    A  L 
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614

Query: 561 QKL 563
           +KL
Sbjct: 615 EKL 617



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 207/406 (50%), Gaps = 31/406 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRI---------- 165
           D  T + +++  C  G++ +A++L+D M  +  +P       L++GL R+          
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303

Query: 166 ---------------------DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
                                 ++ +A+++ + M + G  PD  TY++++ GLCK G+I 
Sbjct: 304 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIG 363

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           SA+ LL EM   G  P+V+TY  +L +   NG +       ++   KG       Y  +I
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             +CK   +  A+ ++ +M  +GC+PDI +YN+++   C   + ++A  +  NLL  G+ 
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            N ITYNT++H+L   G W    ++   M     S  V +YN LI  +CK G VDR++  
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M  K  +P+ V+YN ++  LCKE  + +AL+L   +     +P ++TYNTLI+GL K
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            G M  A+ L  ++    + PD IT+  LI   C+   +++A  LL
Sbjct: 604 MGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 208/432 (48%), Gaps = 6/432 (1%)

Query: 136 ASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT-ITYNMM 193
           A  L+D + RR  + P F     ++  L R D    A  + + MV    VP T  T+ + 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
              LC+ G+   A+ALL  M+  GC PD + Y T++  + D G   +A     + L  GC
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
              + T+  ++  +C    +  A  ++D M  +GC P ++TY  L+   C+  + D+A  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA-- 299

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
               +L R  E N + +NT++    + G      ++ + M      P   TY+IL++GLC
Sbjct: 300 --RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K G +  A+    +M  K   P++VTY  VL + CK GM ++   LL  ++    +    
Sbjct: 358 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            YN +I  L K G M++AM L  +M   G +PD  ++ T+I+  C  +Q+EEA  + + +
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            + G       Y  +IH L +  +   A+++ + MI      D   ++ ++K +  DG  
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 537

Query: 554 EEAYKLWQKLIE 565
           + +  L +++ E
Sbjct: 538 DRSLVLLEEMAE 549



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 180/339 (53%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++    + GKL +A++L + M  +   PD H    L+ GL ++ RI  A ++L+ M  
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK 374

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +TY +++   CK G      ALL+EMS  G   +   YN ++  +  +G+  +
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+G  ++   +GC P + +Y  +I  +C    +  A  + +++  EG   + +TYN++++
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              + G++ DAV +   ++  G   + ++YN L+ ++   G  D    +L+ M E    P
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              +YNILI+ LCK   V  A+    QM+++   PDIVTYNT++  LCK G ++ AL LL
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
             L+  +  P +ITYN LI    K   ++ A +L  + M
Sbjct: 615 EKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 183/371 (49%), Gaps = 6/371 (1%)

Query: 206 AIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL-RKGCPPYLITYTIL 263
           A+ LLD++    G +P   +YN +L  +        A+  ++  + R   PP   T+ + 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
              +C+      A+ +L  MA  GC PD V Y ++++  C QG   +A  ++N +L  G 
Sbjct: 182 ARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             +  T++ ++  +   G      +++D M      P V TY  L+ GLC+    D A  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA-- 299

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               M+ +  + ++V +NTV+G    EG L EA +L   +    C P   TY+ L+ GL 
Sbjct: 300 --RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G +  A+ L  +M + G +P+ +T+  ++  FC+    ++   LL+E+  +G  + + 
Sbjct: 358 KLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I+ LCK  ++D A+ +++ M S    PD   ++TI+  + ++   EEA  +++ L
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 564 IEWKVFEKGTT 574
           +E  V   G T
Sbjct: 478 LEEGVVANGIT 488



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 109/200 (54%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ + C+  ++ +A  + + +     + +      +I  L+R  R + A ++ + M++
Sbjct: 455 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 514

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D ++YN ++  +CK G +  ++ LL+EM+  G +P+ ++YN ++  +    + + 
Sbjct: 515 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD 574

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   K  L +G  P ++TY  LI  +CK   +  A+ +L+ +  E   PDI+TYN L++
Sbjct: 575 ALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634

Query: 301 FSCKQGKYDDAVLVINNLLS 320
           + CK    DDA +++N  ++
Sbjct: 635 WHCKVRLLDDAAMLLNRAMA 654


>gi|242042646|ref|XP_002459194.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
 gi|241922571|gb|EER95715.1| hypothetical protein SORBIDRAFT_02g000310 [Sorghum bicolor]
          Length = 847

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 234/450 (52%), Gaps = 1/450 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  ++  C  G+L +A  L++ M      PD      L+RGL +  ++++A++ L+ M
Sbjct: 152 TCNIWIRGLCEGGRLEEAVALVESMDAYIA-PDVVTYNTLMRGLCKDSKVQEAAQYLRRM 210

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G +PD  TYN ++ G CKR  ++ A  LL +    G  PD +TY +++  +   G  
Sbjct: 211 MNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDV 270

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+  + +   K   P L+ Y  L++ +C+Q  I  A++V+++M  +GC PDI TYN +
Sbjct: 271 ERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIV 330

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G   DA +V+N+ + +G  P+  T+NT++     R   D+  ++++ M     
Sbjct: 331 INGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGI 390

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   TYN ++NGLCK G       +F +M+ K C+P+ +TYN ++   CK   L EA  
Sbjct: 391 APDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASG 450

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  ++     P  I++NTLI G  + G ++ A +L+ ++ E G S    T   LI  + 
Sbjct: 451 VIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYS 510

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
               ++ A  +  E+  +G K     YR+++ G CK+  VD A   L  M+S  + P   
Sbjct: 511 SKLNMQMAEKIFGEMISKGYKPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMA 570

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            F  ++  +A +    EA  +   ++   V
Sbjct: 571 TFGRVLNSLAMNHRVSEAVAIIHIMVRMGV 600



 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 233/447 (52%), Gaps = 2/447 (0%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           +L  S   ++  D  T N +++  C   K+ +A++ +  M  +  IPD      +I G  
Sbjct: 171 ALVESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYC 230

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           + D +++A+++L+  +  G VPD +TY  ++ GLC  G +  A+ L +E      +PD++
Sbjct: 231 KRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLV 290

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
            YN++++ +   G    A+    + +  GC P + TY I+I  +CK   I+ A  V++D 
Sbjct: 291 VYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDA 350

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
            ++G  PD+ T+N++++  CK+ K D A+ ++  +   G+ P++ITYN++L+ L   G  
Sbjct: 351 IVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKA 410

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             V++  + M      P   TYNILI   CK   ++ A     +M      PD +++NT+
Sbjct: 411 KEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNTL 470

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +   C+ G L+ A  L   L+    S    T+N LI   + K  M+ A  ++G+M+  G 
Sbjct: 471 IHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKGY 530

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD  T+R L+ G C+A  V+ A   L E+  +G     + +  V++ L  + +V  A+ 
Sbjct: 531 KPDLYTYRVLVDGSCKAANVDRAYVHLAEMVSKGFVPSMATFGRVLNSLAMNHRVSEAVA 590

Query: 524 VLELMISSRYKPD--DTVFSTIVKKVA 548
           ++ +M+     P+  DT+ ST  K++A
Sbjct: 591 IIHIMVRMGVVPEVVDTILSTDKKEIA 617



 Score =  228 bits (581), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 139/445 (31%), Positives = 222/445 (49%), Gaps = 7/445 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C +G + ++  L+  + +R    +   C   IRGL    R+E+A  ++
Sbjct: 114 DVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALV 173

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +   PD +TYN ++ GLCK  +++ A   L  M   GC PD  TYNTI+      
Sbjct: 174 ESMD-AYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKR 232

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              ++A    KD + KG  P  +TY  LI  +C +  + RA+E+ ++   +   PD+V Y
Sbjct: 233 DMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVY 292

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NSLV   C+QG    A+ V+N ++  G  P+  TYN +++ L   G    +     +MN+
Sbjct: 293 NSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMG---NISDAAVVMND 349

Query: 356 A---SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           A    + P VFT+N +I+G CK   +D A+    +M      PD +TYN+VL  LCK G 
Sbjct: 350 AIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGK 409

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             E  +    +    C P  ITYN LI+   K   +E+A  +  +M ++G+ PD I+  T
Sbjct: 410 AKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRMSQDGLVPDTISFNT 469

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI GFCR   ++ A  L +++ ++G       + ++I        + MA ++   MIS  
Sbjct: 470 LIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNILIGAYSSKLNMQMAEKIFGEMISKG 529

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAY 557
           YKPD   +  +V         + AY
Sbjct: 530 YKPDLYTYRVLVDGSCKAANVDRAY 554



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 236/442 (53%), Gaps = 1/442 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++   + G   DA  L D M RR+  PD     N++  L +   I ++  +L  ++  G
Sbjct: 86  VVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRG 145

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T N+ + GLC+ G++  A+AL++ M  +   PDV+TYNT++R +  + K ++A 
Sbjct: 146 MSVNKFTCNIWIRGLCEGGRLEEAVALVESMD-AYIAPDVVTYNTLMRGLCKDSKVQEAA 204

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            + +  + +GC P   TY  +I+  CK+  +  A E+L D   +G  PD VTY SL+N  
Sbjct: 205 QYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGL 264

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +G  + A+ + N   ++ ++P+ + YN+L+  L  +G      ++++ M E    P +
Sbjct: 265 CAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDI 324

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TYNI+INGLCK G +  A    N  + K   PD+ T+NT++   CK   L+ ALQL+  
Sbjct: 325 WTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVER 384

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P  ITYN++++GL K G  ++    + +M+  G  P+ IT+  LI  FC+ +Q
Sbjct: 385 MWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQ 444

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +EEA  ++  + + G      ++  +IHG C++  +D A  + + +    Y      F+ 
Sbjct: 445 LEEASGVIVRMSQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDEKGYSATADTFNI 504

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           ++   +     + A K++ ++I
Sbjct: 505 LIGAYSSKLNMQMAEKIFGEMI 526



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 238/457 (52%), Gaps = 9/457 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKA 171
           V  D +T+   +++FC  G+   A +L+  +  R   +    +C  ++RGL        A
Sbjct: 41  VAPDARTHTVRIKSFCITGRPHVALRLLRSLPERGCDVKPLAYC-TVVRGLYAHGHGYDA 99

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M+     PD  T+N ++  LC++G I  + ALL ++   G   +  T N  +R 
Sbjct: 100 RHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRG 159

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           + + G+ ++A+    + +     P ++TY  L+  +CK   +  A + L  M  +GC PD
Sbjct: 160 LCEGGRLEEAVAL-VESMDAYIAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPD 218

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
             TYN++++  CK+    +A  ++ + + +G  P+ +TY +L++ L + G    V++ L+
Sbjct: 219 DFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGLCAEG---DVERALE 275

Query: 352 IMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + NEA      P +  YN L+ GLC+ GL+  A+   N+MV   C PDI TYN V+  LC
Sbjct: 276 LFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLC 335

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G +++A  +++        P + T+NT+IDG  K+  ++ A+ L  +M   GI+PD I
Sbjct: 336 KMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRLKLDSALQLVERMWMYGIAPDAI 395

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +++ G C+A + +E  +  +E+  +G +     Y ++I   CK  +++ A  V+  M
Sbjct: 396 TYNSVLNGLCKAGKAKEVNETFEEMILKGCRPNAITYNILIENFCKINQLEEASGVIVRM 455

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                 PD   F+T++     +G  + AY L+QKL E
Sbjct: 456 SQDGLVPDTISFNTLIHGFCRNGDLDGAYLLFQKLDE 492



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 205/408 (50%), Gaps = 3/408 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           ++  L+     ++A KV   M+ +G  PD  T+ + +   C  G+   A+ LL  +   G
Sbjct: 16  IMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGRPHVALRLLRSLPERG 75

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+   + Y T++R ++ +G    A   + + LR+   P + T+  ++  +C++  I  + 
Sbjct: 76  CDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNNVLHALCQKGDIMESG 135

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L  +   G S +  T N  +   C+ G+ ++AV ++ ++ +  + P+ +TYNTL+  L
Sbjct: 136 ALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESMDAY-IAPDVVTYNTLMRGL 194

Query: 338 -GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
                  +A   +  +MN+    P  FTYN +I+G CK  ++  A       + K   PD
Sbjct: 195 CKDSKVQEAAQYLRRMMNQGC-IPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPD 253

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            VTY +++  LC EG +  AL+L +        P L+ YN+L+ GL ++G +  A+ +  
Sbjct: 254 RVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMN 313

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M+E+G  PD  T+  +I G C+   + +A  ++ +   +G       +  +I G CK  
Sbjct: 314 EMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDVFTFNTMIDGYCKRL 373

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           K+D A+Q++E M      PD   +++++  +   G  +E  + ++++I
Sbjct: 374 KLDSALQLVERMWMYGIAPDAITYNSVLNGLCKAGKAKEVNETFEEMI 421



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 182/387 (47%), Gaps = 5/387 (1%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M + G  P    YN ++  L        A  +   M  +G  PD  T+   +++    G+
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A+   +    +GC    + Y  ++  +        A  + D+M      PD+ T+N+
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  C++G   ++  ++  +L RGM  N  T N  +  L   G  +    +++ M +A 
Sbjct: 121 VLHALCQKGDIMESGALLAKVLKRGMSVNKFTCNIWIRGLCEGGRLEEAVALVESM-DAY 179

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +P V TYN L+ GLCK   V  A     +M+++ C PD  TYNT++   CK  ML EA 
Sbjct: 180 IAPDVVTYNTLMRGLCKDSKVQEAAQYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEAT 239

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL         P  +TY +LI+GL  +G +E+A+ L+ +     + PD + + +L+ G 
Sbjct: 240 ELLKDAIFKGFVPDRVTYCSLINGLCAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGL 299

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           CR   +  A+ ++ E+ + G       Y +VI+GLCK   +  A  V+   I   Y PD 
Sbjct: 300 CRQGLILHALQVMNEMVEDGCHPDIWTYNIVINGLCKMGNISDAAVVMNDAIVKGYLPDV 359

Query: 538 TVFSTIV----KKVADDGMTEEAYKLW 560
             F+T++    K++  D   +   ++W
Sbjct: 360 FTFNTMIDGYCKRLKLDSALQLVERMW 386



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/353 (26%), Positives = 166/353 (47%), Gaps = 36/353 (10%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           M + GC P    YN I+  + +     QA   +   L  G  P   T+T+ I+  C    
Sbjct: 1   MDLFGCPPAAPAYNAIMDALVNTAYHDQAHKVYVRMLSAGVAPDARTHTVRIKSFCITGR 60

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
              A+ +L  +   GC    + Y ++V      G   DA  + + +L R + P+  T+N 
Sbjct: 61  PHVALRLLRSLPERGCDVKPLAYCTVVRGLYAHGHGYDARHLFDEMLRRDVFPDVATFNN 120

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           +LH+L  +G         DIM   +          L+  + K G+   ++N F       
Sbjct: 121 VLHALCQKG---------DIMESGA----------LLAKVLKRGM---SVNKF------- 151

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
                 T N  +  LC+ G L EA+ L+  ++ +  +P ++TYNTL+ GL K   +++A 
Sbjct: 152 ------TCNIWIRGLCEGGRLEEAVALVESMD-AYIAPDVVTYNTLMRGLCKDSKVQEAA 204

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
               +MM  G  PDD T+ T+I G+C+ D ++EA +LLK+   +G       Y  +I+GL
Sbjct: 205 QYLRRMMNQGCIPDDFTYNTIIDGYCKRDMLQEATELLKDAIFKGFVPDRVTYCSLINGL 264

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           C    V+ A+++     +   KPD  V++++VK +   G+   A ++  +++E
Sbjct: 265 CAEGDVERALELFNEAQAKDLKPDLVVYNSLVKGLCRQGLILHALQVMNEMVE 317


>gi|224134148|ref|XP_002321748.1| predicted protein [Populus trichocarpa]
 gi|222868744|gb|EEF05875.1| predicted protein [Populus trichocarpa]
          Length = 1041

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 223/448 (49%), Gaps = 1/448 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D +T N +++ +      +    L+  M + N +P  + C  +I GL R   IE AS
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V +IMV  G  P+ + Y  ++ G  + G+ + A+ +L  M   G +PDV+ YN+++  +
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + K ++A  +  + + +G  P + TY  LI   CK   +  A     +M   G +P+ 
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V   +L++  CK+G   +A  +   +L R + P+  TY+ L+H L   G      ++L  
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSE 646

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
             E    P VFTYN +I+G CK G + +A      M  K   P+I+TYN ++  LCK G 
Sbjct: 647 FLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE 706

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +  A +L   + G   +   +TY T+IDG  K G + KA  L+ +M   G+ PD   +  
Sbjct: 707 IERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA 766

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G  +    E+A+ L  E  ++G     S+   ++ G CKS KV  A Q+LE M+   
Sbjct: 767 LIDGCRKEGNTEKALSLFLESVQKGFA-STSSLNALMDGFCKSGKVIEANQLLEDMVDKH 825

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            KPD   ++ ++      G  +EA + +
Sbjct: 826 VKPDHVTYTILIDYHCKTGFLKEAEQFF 853



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 226/452 (50%), Gaps = 1/452 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+   C  G + DAS++ +IM      P+      LI+G ++  R ++A ++L++M   G
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD + YN ++ GLCK  ++  A   L EM   G +P+V TY  ++     +G+ + A 
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVAD 571

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            ++K+ L  G  P  +  T LI+  CK+     A  +   M      PD+ TY++L++  
Sbjct: 572 RYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGL 631

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            + GK   A+ +++  L +G+ P+  TYN+++     +G      ++ + M +   SP +
Sbjct: 632 LRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNI 691

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN LINGLCK G ++RA   F+ +  K    + VTY T++   CK G L++A +L   
Sbjct: 692 ITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDE 751

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P    Y+ LIDG  K+G  EKA+ L+ + ++ G +    +   L+ GFC++ +
Sbjct: 752 MTLKGVPPDSFVYSALIDGCRKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGK 810

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V EA  LL+++  +  K  +  Y ++I   CK+  +  A Q    M      P+   ++ 
Sbjct: 811 VIEANQLLEDMVDKHVKPDHVTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTA 870

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           ++      G   E + L+ ++I   +   G T
Sbjct: 871 LLSGYNMAGRRSEMFALFDEMIAKDIEPDGVT 902



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/455 (29%), Positives = 218/455 (47%), Gaps = 1/455 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F  +G   +A ++ + M  R    +      L++G+ +   +EKA  +L  M+M G
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PDT TYN M+ G  K         LL EM  S   P   T   I+  +  +G  + A 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             ++  +  G  P  + YT LI+   ++     A+ +L  M  +G  PD++ YNS++   
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK  K ++A   +  ++ RG++PN  TY  L+H     G     D+    M     +P  
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
                LI+G CK G    A + F  M+ ++  PD+ TY+ ++  L + G L  A++LL  
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSE 646

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
                  P + TYN++I G  K+G + KA  L+  M + GISP+ IT+  LI G C+A +
Sbjct: 647 FLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGE 706

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E A +L   I  +G       Y  +I G CKS  +  A ++ + M      PD  V+S 
Sbjct: 707 IERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSA 766

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           ++     +G TE+A  L+ + ++ K F   ++L A
Sbjct: 767 LIDGCRKEGNTEKALSLFLESVQ-KGFASTSSLNA 800



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 216/445 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L +     KL    +  + M   N + D +   +LI    R    ++  ++L  M  
Sbjct: 205 NGLLSDLLKANKLELFWRFYNGMLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEE 264

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  +TYN+++GGLC+ G++  A  L   M   G   DV TY+ ++       +  +
Sbjct: 265 KGCSPSLVTYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTE 324

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    ++   KG  P  + YT LI+   +Q     A  V ++M   G   ++ TYN+LV 
Sbjct: 325 AKLMLEEMFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVK 384

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G  + A  ++N ++  G++P++ TYN ++           V  +L  M +++  P
Sbjct: 385 GVCKFGDMEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVP 444

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           T +T  ++INGLC++G ++ A   F  MVS   +P+ V Y T++    +EG   EA+++L
Sbjct: 445 TAYTCGMIINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRIL 504

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            +++     P ++ YN++I GL K   ME+A     +M+E G+ P+  T+  LI G+C++
Sbjct: 505 KVMDKKGVQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKS 564

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +++ A    KE+   G    +     +I G CK      A  +   M+     PD   +
Sbjct: 565 GEMQVADRYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTY 624

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           S ++  +  +G  + A +L  + +E
Sbjct: 625 SALIHGLLRNGKLQGAMELLSEFLE 649



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 213/446 (47%), Gaps = 2/446 (0%)

Query: 123  ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            ++  +C  G  T+A+ +   M  R+  PD      LI GL+R  +++ A ++L   +  G
Sbjct: 592  LIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGLLRNGKLQGAMELLSEFLEKG 651

Query: 183  GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             VPD  TYN ++ G CK+G I  A  L + M   G  P++ITYN ++  +   G+ ++A 
Sbjct: 652  LVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNIITYNALINGLCKAGEIERAR 711

Query: 243  GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +     KG     +TY  +I+  CK   +++A  + D+M ++G  PD   Y++L++  
Sbjct: 712  ELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDEMTLKGVPPDSFVYSALIDGC 771

Query: 303  CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
             K+G  + A+ +    + +G    S + N L+      G     +++L+ M +    P  
Sbjct: 772  RKEGNTEKALSLFLESVQKGFASTS-SLNALMDGFCKSGKVIEANQLLEDMVDKHVKPDH 830

Query: 363  FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             TY ILI+  CK G +  A   F  M  +N  P+ +TY  +L      G  +E   L   
Sbjct: 831  VTYTILIDYHCKTGFLKEAEQFFVDMQKRNLMPNALTYTALLSGYNMAGRRSEMFALFDE 890

Query: 423  LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
            +      P  +T++ +ID   K+G   K + L   M++ G +        LI   CR + 
Sbjct: 891  MIAKDIEPDGVTWSVMIDAHLKEGDHVKTLKLVDDMLKKGGNVSKNVCHVLIDPLCRKEH 950

Query: 483  VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
            V E + +L++I ++G  +  +    ++    K+ K+D A +VL+ M+  ++ PD T  + 
Sbjct: 951  VSEVLKVLEKIEEQGLNLSLATCSTLVRCFHKAGKMDGAARVLKSMVRFKWVPDSTELND 1010

Query: 543  IVKKVADDGMTEEAYKLWQKLIEWKV 568
            ++  V  D    E    + K + W+V
Sbjct: 1011 LI-NVEQDSTDSENAGDFLKQMAWEV 1035



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/481 (24%), Positives = 224/481 (46%), Gaps = 37/481 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQI 177
           T N ++   C  G++ +A +L  +M ++  + D F + I LI G  +  R  +A  +L+ 
Sbjct: 273 TYNVVIGGLCRAGEVDEAFELKKLMDKKGLVADVFTYSI-LIDGFGKQKRCTEAKLMLEE 331

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P  + Y  ++ G  ++G    A  + +EM   G + ++ TYN +++ +   G 
Sbjct: 332 MFSKGLKPGHVAYTALIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGD 391

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A     + +  G  P   TY  +IE   K+   +R  ++L +M      P   T   
Sbjct: 392 MEKADALLNEMIMVGIKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGM 451

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++N  C+ G  +DA  V   ++S G++PN++ Y TL+      G +    +IL +M++  
Sbjct: 452 IINGLCRHGSIEDASRVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKG 511

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY----------------- 400
             P V  YN +I GLCK   ++ A +   +M+ +  +P++ TY                 
Sbjct: 512 VQPDVLCYNSVIIGLCKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVAD 571

Query: 401 ------------------NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                               ++   CKEG   EA  +   + G S  P + TY+ LI GL
Sbjct: 572 RYFKEMLGCGIAPNDVVCTALIDGYCKEGSTTEATSIFRCMLGRSVHPDVRTYSALIHGL 631

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            + G ++ AM L  + +E G+ PD  T+ ++I GFC+   + +A  L + + ++G     
Sbjct: 632 LRNGKLQGAMELLSEFLEKGLVPDVFTYNSIISGFCKQGGIGKAFQLHEYMCQKGISPNI 691

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +I+GLCK+ +++ A ++ + +       +   ++TI+      G   +A++L+ +
Sbjct: 692 ITYNALINGLCKAGEIERARELFDGIPGKGLAHNAVTYATIIDGYCKSGNLSKAFRLFDE 751

Query: 563 L 563
           +
Sbjct: 752 M 752



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/444 (22%), Positives = 189/444 (42%), Gaps = 70/444 (15%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           + + +++ G  K+G    A++       +G    ++  N +L  +    K +    F+  
Sbjct: 167 VVFELLIDGYKKKGLFDEAVSFFLGAKRNGFVVGLLCCNGLLSDLLKANKLELFWRFYNG 226

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            L       + TYT LI    +         +L +M  +GCSP +VTYN ++   C+ G+
Sbjct: 227 MLEANVLHDVYTYTHLINAHFRAGNAKEGKRLLFEMEEKGCSPSLVTYNVVIGGLCRAGE 286

Query: 308 YDDAV-----------------------------------LVINNLLSRGMEPNSITYNT 332
            D+A                                    L++  + S+G++P  + Y  
Sbjct: 287 VDEAFELKKLMDKKGLVADVFTYSILIDGFGKQKRCTEAKLMLEEMFSKGLKPGHVAYTA 346

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L+     +G      ++ + M        +FTYN L+ G+CK+G +++A    N+M+   
Sbjct: 347 LIDGFMRQGDSGEAFRVKEEMLARGVKLNLFTYNALVKGVCKFGDMEKADALLNEMIMVG 406

Query: 393 CQPDIVTYNT-----------------------------------VLGALCKEGMLNEAL 417
            +PD  TYN                                    ++  LC+ G + +A 
Sbjct: 407 IKPDTQTYNNMIEGYLKEQNTSRVKDLLSEMKKSNLVPTAYTCGMIINGLCRHGSIEDAS 466

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++  ++      P  + Y TLI G  ++G  ++A+ +   M + G+ PD + + ++I G 
Sbjct: 467 RVFEIMVSLGVKPNAVIYTTLIKGHVQEGRFQEAVRILKVMDKKGVQPDVLCYNSVIIGL 526

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C++ ++EEA D L E+ +RG K     Y  +IHG CKS ++ +A +  + M+     P+D
Sbjct: 527 CKSRKMEEAKDYLVEMIERGLKPNVYTYGALIHGYCKSGEMQVADRYFKEMLGCGIAPND 586

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQ 561
            V + ++     +G T EA  +++
Sbjct: 587 VVCTALIDGYCKEGSTTEATSIFR 610


>gi|218184398|gb|EEC66825.1| hypothetical protein OsI_33257 [Oryza sativa Indica Group]
          Length = 948

 Score =  232 bits (592), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 142/491 (28%), Positives = 240/491 (48%), Gaps = 34/491 (6%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI-RGLI 163
           LP   G  V+   ++ N +L          DA  L   M  R+++P   F   +  R L 
Sbjct: 129 LPRRFG--VQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVAARALC 186

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           R+ R  +A  +L+ M   G VPD + Y  ++  LC +G +  A  LL+EM + GC  DV 
Sbjct: 187 RLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVN 246

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK-------------- 269
           T++ ++R M   G+ ++A       + KGC P ++TY  L++ +C+              
Sbjct: 247 TFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRV 306

Query: 270 -----------------QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
                            +  +A A E+ + M ++GC PD  TY+ L++  CK G+   AV
Sbjct: 307 PELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAV 366

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            ++  +  +G  PN +TY  +LHS    G WD    +L+ M+    +     YN +I  L
Sbjct: 367 RLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYAL 426

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G +D A+    +M S+ C PDI +YNT++  LC    + EA  +   L         
Sbjct: 427 CKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANG 486

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           ITYNT+I  L + G  + A+ L  +M+ +G S D +++  LI   C+   V+ ++ LL+E
Sbjct: 487 ITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEE 546

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + ++G K  N +Y ++I  LCK ++V  A+++ + M++    PD   ++T++  +   G 
Sbjct: 547 MAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGW 606

Query: 553 TEEAYKLWQKL 563
              A  L +KL
Sbjct: 607 MHAALNLLEKL 617



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 207/406 (50%), Gaps = 31/406 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRI---------- 165
           D  T + +++  C  G++ +A++L+D M  +  +P       L++GL R+          
Sbjct: 244 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 303

Query: 166 ---------------------DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
                                 ++ +A+++ + M + G  PD  TY++++ GLCK G+I 
Sbjct: 304 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIS 363

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           SA+ LL EM   G  P+V+TY  +L +   NG +       ++   KG       Y  +I
Sbjct: 364 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 423

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             +CK   +  A+ ++ +M  +GC+PDI +YN+++   C   + ++A  +  NLL  G+ 
Sbjct: 424 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 483

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            N ITYNT++H+L   G W    ++   M     S  V +YN LI  +CK G VDR++  
Sbjct: 484 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 543

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M  K  +P+ V+YN ++  LCKE  + +AL+L   +     +P ++TYNTLI+GL K
Sbjct: 544 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 603

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            G M  A+ L  ++    + PD IT+  LI   C+   +++A  LL
Sbjct: 604 MGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 649



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 208/432 (48%), Gaps = 6/432 (1%)

Query: 136 ASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT-ITYNMM 193
           A  L+D + RR  + P F     ++  L R D    A  + + MV    VP T  T+ + 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
              LC+ G+   A+ALL  M+  GC PD + Y T++  + D G   +A     + L  GC
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
              + T+  ++  +C    +  A  ++D M  +GC P ++TY  L+   C+  + D+A  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA-- 299

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
               +L R  E N + +NT++    + G      ++ + M      P   TY+IL++GLC
Sbjct: 300 --RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K G +  A+    +M  K   P++VTY  VL + CK GM ++   LL  ++    +    
Sbjct: 358 KLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            YN +I  L K G M++AM L  +M   G +PD  ++ T+I+  C  +Q+EEA  + + +
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            + G       Y  +IH L +  +   A+++ + MI      D   ++ ++K +  DG  
Sbjct: 478 LEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNV 537

Query: 554 EEAYKLWQKLIE 565
           + +  L +++ E
Sbjct: 538 DRSLVLLEEMAE 549



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 180/339 (53%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++    + GKL +A++L + M  +   PD H    L+ GL ++ RI  A ++L+ M  
Sbjct: 315 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRISSAVRLLREMEK 374

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +TY +++   CK G      ALL+EMS  G   +   YN ++  +  +G+  +
Sbjct: 375 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 434

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+G  ++   +GC P + +Y  +I  +C    +  A  + +++  EG   + +TYN++++
Sbjct: 435 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 494

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              + G++ DAV +   ++  G   + ++YN L+ ++   G  D    +L+ M E    P
Sbjct: 495 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 554

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              +YNILI+ LCK   V  A+    QM+++   PDIVTYNT++  LCK G ++ AL LL
Sbjct: 555 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 614

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
             L+  +  P +ITYN LI    K   ++ A +L  + M
Sbjct: 615 EKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 653



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 183/371 (49%), Gaps = 6/371 (1%)

Query: 206 AIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL-RKGCPPYLITYTIL 263
           A+ LLD++    G +P   +YN +L  +        A+  ++  + R   PP   T+ + 
Sbjct: 122 ALHLLDQLPRRFGVQPSFRSYNVVLSVLARADCHADALALYRRMVHRDRVPPTTFTFGVA 181

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
              +C+      A+ +L  MA  GC PD V Y ++++  C QG   +A  ++N +L  G 
Sbjct: 182 ARALCRLGRANEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATLLNEMLLMGC 241

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             +  T++ ++  +   G      +++D M      P V TY  L+ GLC+    D A  
Sbjct: 242 AADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEA-- 299

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               M+ +  + ++V +NTV+G    EG L EA +L   +    C P   TY+ L+ GL 
Sbjct: 300 --RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLC 357

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G +  A+ L  +M + G +P+ +T+  ++  FC+    ++   LL+E+  +G  + + 
Sbjct: 358 KLGRISSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQ 417

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I+ LCK  ++D A+ +++ M S    PD   ++TI+  + ++   EEA  +++ L
Sbjct: 418 GYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENL 477

Query: 564 IEWKVFEKGTT 574
           +E  V   G T
Sbjct: 478 LEEGVVANGIT 488



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 109/200 (54%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ + C+  ++ +A  + + +     + +      +I  L+R  R + A ++ + M++
Sbjct: 455 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 514

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D ++YN ++  +CK G +  ++ LL+EM+  G +P+ ++YN ++  +    + + 
Sbjct: 515 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD 574

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   K  L +G  P ++TY  LI  +CK   +  A+ +L+ +  E   PDI+TYN L++
Sbjct: 575 ALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 634

Query: 301 FSCKQGKYDDAVLVINNLLS 320
           + CK    DDA +++N  ++
Sbjct: 635 WHCKVRLLDDAAMLLNRAMA 654


>gi|41152687|dbj|BAD08212.1| hypothetical protein [Oryza sativa Indica Group]
 gi|46091163|dbj|BAD13710.1| PPR protein [Oryza sativa Indica Group]
 gi|67906116|dbj|BAE00068.1| PPR protein [Oryza sativa Indica Group]
 gi|114437073|gb|ABI74690.1| fertility restorer [Oryza sativa Indica Group]
          Length = 683

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 255/517 (49%), Gaps = 41/517 (7%)

Query: 84  VLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKL 139
           V + N  L GL    +S +      + + DG     D  + + ++  F   G L      
Sbjct: 51  VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDKTYST 110

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK 199
            + M  +   P+     ++I  L +   ++KA +VL  MV SG +PD +TYN +V G C 
Sbjct: 111 YNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 170

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
            GQ + AI  L +M   G EPDV+TYN+++  +  NG+  +A   +    ++G  P + T
Sbjct: 171 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITT 230

Query: 260 Y-----------------------------------TILIEQVCKQCGIARAIEVLDDMA 284
           Y                                   +IL+    KQ  +  A+ V   M 
Sbjct: 231 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 290

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +G +P+ VTY +++   CK G+ +DA+L    ++  G+ P +I YN+L+H L +   W+
Sbjct: 291 QQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWE 350

Query: 345 AVDK-ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             ++ IL++++      T+F +N +I+  CK G V  +   F+ MV    +PDI+TY+T+
Sbjct: 351 RAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 409

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +   C  G ++EA +LL  +      P  +TY+TLI+G  K   M+ A+VL+ +M  +G+
Sbjct: 410 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGV 469

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           SPD IT+  ++ G  +  +   A +L   I K G ++  S Y +++HGLCK+K  D A++
Sbjct: 470 SPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALR 529

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           + + +     K +   F+ ++  +   G  +EA  L+
Sbjct: 530 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 566



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 199/384 (51%), Gaps = 2/384 (0%)

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDNGKFKQ 240
           G+PD  +YN+++ GLC   + + A+ LL  M+  G  C PDV++Y+T++   F  G   +
Sbjct: 47  GIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDLDK 106

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               + + L +   P ++TY  +I  +CK   + +A+EVL  M   G  PD +TYNS+V+
Sbjct: 107 TYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVH 166

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G+  +A++ +  + S G+EP+ +TYN+L+  L   G      KI D M +    P
Sbjct: 167 GFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP 226

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TY  L+ G    G +       + MV     P+   ++ ++ A  K+  + EA+ + 
Sbjct: 227 EITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF 286

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +     +P  +TY  +I  L K G +E AM+ + QM++ G+SP +I + +LI G C  
Sbjct: 287 SKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTC 346

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           ++ E A +L+ E+  RG  +    +  +I   CK  +V  + ++ +LM+    KPD   +
Sbjct: 347 NKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITY 406

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           ST++      G  +EA KL   ++
Sbjct: 407 STLIDGYCLAGKMDEATKLLASMV 430



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 128/432 (29%), Positives = 218/432 (50%), Gaps = 5/432 (1%)

Query: 135 DASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGG--VPDTITYN 191
           DA  + D + RR  IPD F + I L+ GL   +R ++A ++L IM   GG   PD ++Y+
Sbjct: 35  DARHVFDELLRRG-IPDVFSYNI-LLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            ++ G  K G +    +  +EM      P+V+TYN+I+  +       +A+      ++ 
Sbjct: 93  TVINGFFKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 152

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P  +TY  ++   C       AI  L  M  +G  PD+VTYNSL+++ CK G+  +A
Sbjct: 153 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 212

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             + +++  RG++P   TY TLL    ++G    +  +LD+M      P  + ++IL+  
Sbjct: 213 RKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 272

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
             K   V+ A+  F++M  +   P+ VTY  V+G LCK G + +A+     +     SP 
Sbjct: 273 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPG 332

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
            I YN+LI GL      E+A  L  +M++ GI  + I   ++I   C+  +V E+  L  
Sbjct: 333 NIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFD 392

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            + + G K     Y  +I G C + K+D A ++L  M+S   KPD   +ST++       
Sbjct: 393 LMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKIS 452

Query: 552 MTEEAYKLWQKL 563
             ++A  L++++
Sbjct: 453 RMKDALVLFREM 464



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 169/323 (52%), Gaps = 3/323 (0%)

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFS 302
           + + LR+G P  + +Y IL+  +C +     A+E+L  MA +G  C PD+V+Y++++N  
Sbjct: 40  FDELLRRGIPD-VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF 98

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+G  D      N +L + + PN +TYN+++ +L      D   ++L  M ++   P  
Sbjct: 99  FKEGDLDKTYSTYNEMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDC 158

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN +++G C  G    AI    +M S   +PD+VTYN+++  LCK G   EA ++   
Sbjct: 159 MTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS 218

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P + TY TL+ G A KG + +   L   M+ NGI P+      L+  + + ++
Sbjct: 219 MTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 278

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEEA+ +  ++ ++G       Y  VI  LCKS +V+ A+   E MI     P + V+++
Sbjct: 279 VEEAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNS 338

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++  +      E A +L  ++++
Sbjct: 339 LIHGLCTCNKWERAEELILEMLD 361



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 107/449 (23%), Positives = 211/449 (46%), Gaps = 5/449 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +LQ + ++G L +   L+D+M R    P+ +    L+    + +++E+A  V   M
Sbjct: 230 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKM 289

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ +TY  ++G LCK G++  A+   ++M   G  P  I YN+++  +    K+
Sbjct: 290 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 349

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     + L +G     I +  +I+  CK+  +  + ++ D M   G  PDI+TY++L
Sbjct: 350 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 409

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  GK D+A  ++ +++S GM+P+ +TY+TL++             +   M  +  
Sbjct: 410 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGV 469

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP + TYNI++ GL +      A   +  +     Q ++ TYN +L  LCK  + ++AL+
Sbjct: 470 SPDIITYNIILQGLFQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALR 529

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   L          T+N +ID L K G  ++A  L+     NG+ P+  T+R +     
Sbjct: 530 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 589

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
               +EE   L   +   G  + +     ++  L +  ++  A   L ++    +  + +
Sbjct: 590 GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAS 649

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
             S  +     D ++   Y+ + + +  K
Sbjct: 650 TASLFI-----DLLSGGKYQEYHRFLPEK 673



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 214/462 (46%), Gaps = 3/462 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE D  T N ++   C  G+ T+A K+ D M +R   P+      L++G      
Sbjct: 186 SDG--VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 243

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  P+   ++++V    K+ ++  A+ +  +M   G  P+ +TY  
Sbjct: 244 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGA 303

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G+ + A+ +++  + +G  P  I Y  LI  +C      RA E++ +M   G
Sbjct: 304 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 363

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              + + +NS+++  CK+G+  ++  + + ++  G++P+ ITY+TL+      G  D   
Sbjct: 364 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 423

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P   TY+ LING CK   +  A+  F +M S    PDI+TYN +L  L
Sbjct: 424 KLLASMVSVGMKPDCVTYSTLINGYCKISRMKDALVLFREMESSGVSPDIITYNIILQGL 483

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +      A +L   +  S     L TYN ++ GL K    + A+ ++  +    +  + 
Sbjct: 484 FQTRRTAAAKELYVGITKSGRQLELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEA 543

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  + +EA DL       G       YRL+   +     ++   Q+   
Sbjct: 544 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 603

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           M  +    D  + + IV+++   G    A   +  +I+ K F
Sbjct: 604 MEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEKHF 644


>gi|302785473|ref|XP_002974508.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
 gi|300158106|gb|EFJ24730.1| hypothetical protein SELMODRAFT_101075 [Selaginella moellendorffii]
          Length = 567

 Score =  232 bits (591), Expect = 4e-58,   Method: Compositional matrix adjust.
 Identities = 140/471 (29%), Positives = 240/471 (50%), Gaps = 15/471 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+   N ++  +        A K +  M + + +P      N++ GL + +R   A K+L
Sbjct: 76  DDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAVKLL 135

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+  TYN++V GLC+  ++  A  +L+EM+V G  PDV+TYN+ ++ +   
Sbjct: 136 DEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKC 195

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A  F     R    P +++YT +I  +CK   +  A  +LD M+  GC+PD+VTY
Sbjct: 196 DRVDEARKFLA---RMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTY 252

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +SL++  CK G+ + A+ +++++L  G  PN + YN+LL +L   G     + +L  M  
Sbjct: 253 SSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER 312

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP----------DIVTYNTVLG 405
              +P V +YN  I+GLCK   V +A   F++MV + C P          DI+ Y  +L 
Sbjct: 313 RGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLD 372

Query: 406 ALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            LCK G  +EA  L   +L+   C P +  YN ++D   K+  ++KA+ ++ QM+E    
Sbjct: 373 GLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCC 432

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
            + +T   L+ G C  D++ +A  +L  +   G       Y  ++  +CK  K   A+++
Sbjct: 433 -NVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALEL 491

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            E  +     PD   +S ++  +  + M EEAY L+ KL+E +      TL
Sbjct: 492 FEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTL 542



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 124/419 (29%), Positives = 219/419 (52%), Gaps = 14/419 (3%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+  L R  R +KAS V Q M+     PD  T+ +++ GLC+  Q+  A  LL  M   G
Sbjct: 13  LLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKARKLLGRMKEMG 72

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C PD   YN ++        F QA  F  + ++  C P ++TYT +++ +CK      A+
Sbjct: 73  CVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAERTRDAV 132

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++LD+M  +GCSP+I TYN +V   C++ K D+A  ++  +  RG  P+ +TYN+ +  L
Sbjct: 133 KLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGL 192

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                 D VD+    +     +P V +Y  +INGLCK G +D A    + M ++ C PD+
Sbjct: 193 CK---CDRVDEARKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDV 249

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTY++++   CK G +  A+ LL  +    C P ++ YN+L+  L + G + KA  +  +
Sbjct: 250 VTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVE 309

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI-------- 509
           M   G +PD +++   I G C+A++V++A  +   + +RG     S+Y ++I        
Sbjct: 310 MERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTV 369

Query: 510 --HGLCKSKKVDMAIQVLELMISSRY-KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              GLCK  + D A  +   ++  +  +PD   ++ ++         ++A ++ ++++E
Sbjct: 370 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 428



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 142/499 (28%), Positives = 249/499 (49%), Gaps = 52/499 (10%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKAS 172
           E++  T NK+L       +   AS +   M  ++  PD F F I L+RGL R +++EKA 
Sbjct: 4   EHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAI-LLRGLCRSNQLEKAR 62

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L  M   G VPD   YN ++ G  K      A   L EM  + C P V+TY  I+  +
Sbjct: 63  KLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGL 122

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               + + A+    +   KGC P + TY +++E +C++  +  A ++L++MA+ G  PD+
Sbjct: 123 CKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDV 182

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           VTYNS +   CK  + D+A       L+R  + P+ ++Y T+++ L   G  D+  ++LD
Sbjct: 183 VTYNSFIKGLCKCDRVDEA----RKFLARMPVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M+    +P V TY+ LI+G CK G V+RA+   + M+   C+P++V YN++LGAL + G
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP------ 465
            + +A  +L  +     +P +++YN  IDGL K   ++KA  ++ +M+E G +P      
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 466 ----DDITHRTLIWGFCRADQVEEAVDLLKEIGKRG---------NKMRNS--------- 503
               D + +  L+ G C+  + +EA  L  ++             N M +S         
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDK 418

Query: 504 -----------------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
                             + +++HGLC   ++  A  +L  M+   + PD   + T+V  
Sbjct: 419 ALQIHKQMLEKNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDA 478

Query: 547 VADDGMTEEAYKLWQKLIE 565
           +   G +  A +L+++ ++
Sbjct: 479 MCKCGKSAAALELFEEAVK 497



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 122/404 (30%), Positives = 197/404 (48%), Gaps = 52/404 (12%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I++  C   KL +A K+++ MA R   PD     + I+GL + DR+++A K L  M
Sbjct: 149 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 208

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            ++   PD ++Y  ++ GLCK G + SA  +LD MS  GC PDV+TY++++      G+ 
Sbjct: 209 PVT---PDVVSYTTVINGLCKSGDLDSASRMLDHMSNRGCTPDVVTYSSLIDGFCKGGEV 265

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+G     L+ GC P ++ Y  L+  + +   I +A ++L +M   G +PD+V+YN+ 
Sbjct: 266 ERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNAC 325

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNS----------ITYNTLLHSLGSRGCWDAVDK 348
           ++  CK  +   A  V + ++ RG  PN+          + Y  LL  L   G +D    
Sbjct: 326 IDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLIVDILLYTVLLDGLCKGGRFDEACA 385

Query: 349 ILD-IMNEASHSPTVF----------------------------------TYNILINGLC 373
           +   +++E    P VF                                  T+NIL++GLC
Sbjct: 386 LFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLEKNCCNVVTWNILVHGLC 445

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
               +  A      MV +   PD VTY T++ A+CK G    AL+L        C P ++
Sbjct: 446 VDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAALELFEEAVKGGCVPDVV 505

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT----HRTL 473
           TY+ LI GL  +   E+A +L+ +++E    PDD T    HR L
Sbjct: 506 TYSALITGLVHENMAEEAYLLFTKLVERRWVPDDKTLGLLHRKL 549



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/399 (28%), Positives = 191/399 (47%), Gaps = 48/399 (12%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G E +V TYN +L  +    +  +A   +++ + K C P   T+ IL+  +C+   + +A
Sbjct: 2   GYEHNVFTYNKLLLQLTREHRHDKASAVFQEMIDKSCQPDAFTFAILLRGLCRSNQLEKA 61

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVN-FS--------------------------------- 302
            ++L  M   GC PD   YN+L++ +S                                 
Sbjct: 62  RKLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDG 121

Query: 303 -CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK  +  DAV +++ +  +G  PN  TYN ++  L      D   K+L+ M    + P 
Sbjct: 122 LCKAERTRDAVKLLDEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPD 181

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TYN  I GLCK   VD A     +M      PD+V+Y TV+  LCK G L+ A ++L 
Sbjct: 182 VVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDVVSYTTVINGLCKSGDLDSASRMLD 238

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++   C+P ++TY++LIDG  K G +E+AM L   M++ G  P+ + + +L+    R  
Sbjct: 239 HMSNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLG 298

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            + +A D+L E+ +RG      +Y   I GLCK+++V  A  V + M+     P+ + +S
Sbjct: 299 HIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYS 358

Query: 542 TIVKKV----------ADDGMTEEAYKLWQKLIEWKVFE 570
            ++  +             G  +EA  L+ K+++ K+ E
Sbjct: 359 MLIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICE 397


>gi|357151724|ref|XP_003575883.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Brachypodium distachyon]
          Length = 757

 Score =  232 bits (591), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 134/454 (29%), Positives = 236/454 (51%), Gaps = 6/454 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ + +  N +L       K+         M+ +   PD      +I  L R  +   A 
Sbjct: 157 VQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQARTAV 216

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ M      PD  T+  ++ G  + G I +A+ L   MS  GC P  +T N ++   
Sbjct: 217 LMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGY 276

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A+G+ + ++  G  P  +T++  +  +C+   +  A++VL  M  EGC PD+
Sbjct: 277 CKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDV 336

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY++++N  C  G+ ++A  ++N ++  G  P++ T+NTL+ +L +    + +++ LD+
Sbjct: 337 YTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTE---NQLEEALDL 393

Query: 353 MNEAS---HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
             E +    SP V+T+NILIN LCK G    A+  F +M S  C PD VTYN ++  LC 
Sbjct: 394 ARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCS 453

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G L +AL LL  +  S C    +TYNT+IDGL K+  +E+A  ++ QM   GI  + IT
Sbjct: 454 SGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAIT 513

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             TLI G C A+++++A +L+ ++   G +  N  Y  ++   CK   +  A  +L+ M 
Sbjct: 514 FNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMT 573

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++ ++ D   ++T++  +     T+ A KL + +
Sbjct: 574 ANGFEVDVVTYATLINGLCKARRTQAALKLLRGM 607



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 236/459 (51%), Gaps = 2/459 (0%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           SS G  +E D  T N ++   C   +   A  +++ M+  +  PD      L+ G +   
Sbjct: 188 SSQG--IEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEEG 245

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
            IE A ++   M   G  P ++T N+++ G CK G++  A+  + +    G EPD +T++
Sbjct: 246 SIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTFS 305

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           T +  +  NG    A+      L++GC P + TY+ +I  +C    +  A  +++ M   
Sbjct: 306 TFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVDS 365

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GC PD  T+N+L+   C + + ++A+ +   L  +G+ PN  T+N L+++L   G     
Sbjct: 366 GCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNVYTFNILINALCKVGDPHLA 425

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            ++ + M  +  +P   TYNILI+ LC  G + +A++   +M    C    VTYNT++  
Sbjct: 426 VRLFEEMKSSGCTPDEVTYNILIDNLCSSGKLAKALDLLKEMEVSGCPQSTVTYNTIIDG 485

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LCK   + EA ++   ++ +      IT+NTLIDGL     ++ A  L  QM+  G+ P+
Sbjct: 486 LCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCNAERIDDAAELVDQMISEGLQPN 545

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           ++T+ +++  +C+   + +A D+L+ +   G ++    Y  +I+GLCK+++   A+++L 
Sbjct: 546 NVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVTYATLINGLCKARRTQAALKLLR 605

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            M     KP    ++ +++ +       +A  L++++ E
Sbjct: 606 GMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMTE 644



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 129/442 (29%), Positives = 220/442 (49%), Gaps = 6/442 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  DE T   +++ F   G +  A +L   M+     P       LI G  ++ R+  A 
Sbjct: 227 VAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDAL 286

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             +Q  +  G  PD +T++  V GLC+ G +  A+ +L  M   GCEPDV TY+T++  +
Sbjct: 287 GYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCL 346

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            +NG+ ++A G     +  GC P   T+  LI  +C +  +  A+++  ++ ++G SP++
Sbjct: 347 CNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDLARELTVKGLSPNV 406

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+N L+N  CK G    AV +   + S G  P+ +TYN L+ +L S G    + K LD+
Sbjct: 407 YTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCSSG---KLAKALDL 463

Query: 353 MNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           + E   S    +  TYN +I+GLCK   ++ A   F+QM       + +T+NT++  LC 
Sbjct: 464 LKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAITFNTLIDGLCN 523

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              +++A +L+  +      P  +TYN+++    K+G + KA  +   M  NG   D +T
Sbjct: 524 AERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTMTANGFEVDVVT 583

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + TLI G C+A + + A+ LL+ +  +G K    AY  VI  L +      A+ +   M 
Sbjct: 584 YATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNGRDALSLFREMT 643

Query: 530 SSRYKPDDTVFSTIVKKVADDG 551
                PD   +  + + +   G
Sbjct: 644 EVGGPPDAFTYKIVFRGLCRGG 665



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/385 (31%), Positives = 205/385 (53%)

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           M G   +T  YN ++  L +  +I+   +   EMS  G EPDV+T+NT++  +    + +
Sbjct: 154 MFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQAR 213

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            A+   ++       P   T+T L+E   ++  I  A+ +   M+  GCSP  VT N L+
Sbjct: 214 TAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLI 273

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  CK G+  DA+  I   ++ G EP+ +T++T ++ L   G  D   K+L +M +    
Sbjct: 274 NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE 333

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P V+TY+ +IN LC  G ++ A    NQMV   C PD  T+NT++ ALC E  L EAL L
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              L     SP + T+N LI+ L K G    A+ L+ +M  +G +PD++T+  LI   C 
Sbjct: 394 ARELTVKGLSPNVYTFNILINALCKVGDPHLAVRLFEEMKSSGCTPDEVTYNILIDNLCS 453

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           + ++ +A+DLLKE+   G       Y  +I GLCK ++++ A +V + M  +    +   
Sbjct: 454 SGKLAKALDLLKEMEVSGCPQSTVTYNTIIDGLCKRRRIEEAEEVFDQMDVTGIGRNAIT 513

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLI 564
           F+T++  + +    ++A +L  ++I
Sbjct: 514 FNTLIDGLCNAERIDDAAELVDQMI 538



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 83/304 (27%), Positives = 146/304 (48%), Gaps = 5/304 (1%)

Query: 265 EQVCKQCGIARAIEVLD----DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-LVINNLL 319
           E++ ++ G A A +++     +M  EG    +    S +    +   +DDA  LV N L 
Sbjct: 94  EEIIRKLGTAGAFDLMKVLVGEMRREGHEVGLGLVQSFIGSYARLQLFDDAFDLVSNQLD 153

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
             G++ N+  YN LL  L        ++     M+     P V T+N +I+ LC+     
Sbjct: 154 MFGVQANTEVYNHLLTVLAEGSKIKLLESAYTEMSSQGIEPDVVTFNTVIDALCRARQAR 213

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A+    +M S +  PD  T+ T++    +EG +  AL+L   ++   CSP  +T N LI
Sbjct: 214 TAVLMLEEMSSCDVAPDETTFTTLMEGFVEEGSIEAALRLKARMSEMGCSPTSVTVNVLI 273

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +G  K G +  A+    Q + +G  PD +T  T + G C+   V+ A+ +L  + + G +
Sbjct: 274 NGYCKLGRVGDALGYIQQEIADGFEPDRVTFSTFVNGLCQNGHVDHALKVLGLMLQEGCE 333

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  VI+ LC + +++ A  ++  M+ S   PD T F+T++  +  +   EEA  L
Sbjct: 334 PDVYTYSTVINCLCNNGELEEAKGIVNQMVDSGCLPDTTTFNTLIVALCTENQLEEALDL 393

Query: 560 WQKL 563
            ++L
Sbjct: 394 AREL 397



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 145/310 (46%), Gaps = 38/310 (12%)

Query: 304 KQGKYDDAVLVINNLLSR--GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
           +Q   + A+ ++N+ L+R  G+ P+   Y  ++  LG+ G +D +  ++  M    H   
Sbjct: 65  EQADPEAALRMLNSALARDDGLTPSRDVYEEIIRKLGTAGAFDLMKVLVGEMRREGHEVG 124

Query: 362 VFTYNILINGLCKYGLVDRAIN------------------------------------SF 385
           +      I    +  L D A +                                    ++
Sbjct: 125 LGLVQSFIGSYARLQLFDDAFDLVSNQLDMFGVQANTEVYNHLLTVLAEGSKIKLLESAY 184

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            +M S+  +PD+VT+NTV+ ALC+      A+ +L  ++    +P   T+ TL++G  ++
Sbjct: 185 TEMSSQGIEPDVVTFNTVIDALCRARQARTAVLMLEEMSSCDVAPDETTFTTLMEGFVEE 244

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G +E A+ L  +M E G SP  +T   LI G+C+  +V +A+  +++    G +     +
Sbjct: 245 GSIEAALRLKARMSEMGCSPTSVTVNVLINGYCKLGRVGDALGYIQQEIADGFEPDRVTF 304

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              ++GLC++  VD A++VL LM+    +PD   +ST++  + ++G  EEA  +  ++++
Sbjct: 305 STFVNGLCQNGHVDHALKVLGLMLQEGCEPDVYTYSTVINCLCNNGELEEAKGIVNQMVD 364

Query: 566 WKVFEKGTTL 575
                  TT 
Sbjct: 365 SGCLPDTTTF 374



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 49/182 (26%), Positives = 92/182 (50%), Gaps = 1/182 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C+  ++ DA++L+D M      P+     +++    +   I KA+ +LQ M
Sbjct: 513 TFNTLIDGLCNAERIDDAAELVDQMISEGLQPNNVTYNSILTHYCKQGNISKAADILQTM 572

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G   D +TY  ++ GLCK  + ++A+ LL  M + G +P    YN +++++F     
Sbjct: 573 TANGFEVDVVTYATLINGLCKARRTQAALKLLRGMRMKGMKPTPKAYNPVIQSLFRGNNG 632

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG-IARAIEVLDDMAIEGCSPDIVTYNS 297
           + A+  +++    G PP   TY I+   +C+  G I  A + L +MA  G  P+  ++  
Sbjct: 633 RDALSLFREMTEVGGPPDAFTYKIVFRGLCRGGGPIKEAFDFLVEMADNGFIPEFSSFRM 692

Query: 298 LV 299
           L 
Sbjct: 693 LA 694


>gi|18071404|gb|AAL58263.1|AC068923_5 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 1219

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 255/521 (48%), Gaps = 41/521 (7%)

Query: 83  HVLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +V + N  L+GL    +S +      +   DG     D  +   ++  F   G L  A  
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
               M  R  +P+     ++I  L +   ++KA +VL  MV +G +P+  TYN +V G C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
             GQ + AI  L +M   G EPDV+TYN+++  +  NG+  +A   +    ++G  P + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 259 TY-----------------------------------TILIEQVCKQCGIARAIEVLDDM 283
           TY                                   +ILI    KQ  + +A+ V   M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             +G +PD VTY +++   CK G+ +DA+     ++   + P +I YN+L+HSL     W
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 344 D-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           D A + IL++++      T+F +N +I+  CK G V  +   F+ MV    +PDI+TY+T
Sbjct: 461 DKAKELILEMLDRGICLDTIF-FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C  G ++EA +LL  +      P  +TYNTLI+G  K   ME A+VL+ +M  +G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +SPD IT+  ++ G  +  +   A +L   I + G ++  S Y +++HGLCK+   D A+
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++ + +  +  + +   F+ ++  +   G  +EA  L+  L
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 221/444 (49%), Gaps = 38/444 (8%)

Query: 158 LIRGLIRIDRIEKASK-VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           L++GL    R   A   VL+ M   G +P+  +YN+++ GLC   + + A+ LL  M   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 217 G--CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           G  C PDV++Y T++   F  G   +A G + + L +G  P ++TY+ +I  +CK   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 275 RAIEVLDDM---------------------------AI--------EGCSPDIVTYNSLV 299
           +A+EVL  M                           AI        +G  PD+VTYNSL+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           ++ CK G+  +A  + +++  RG++P   TY TLL    ++G    +  +LD+M      
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P  + ++ILI    K G VD+A+  F++M  +   PD VTY TV+G LCK G + +A++ 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +     SP  I YN+LI  L      +KA  L  +M++ GI  D I   ++I   C+
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             +V E+  L   + + G K     Y  +I G C + K+D A ++L  M+S   KPD   
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           ++T++         E+A  L++++
Sbjct: 552 YNTLINGYCKISRMEDALVLFREM 575



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 208/421 (49%), Gaps = 11/421 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + D + RR +    +    L   L  + R   A+ V +   M  +G     P+  T
Sbjct: 37  DARHVFDELLRRGRGASIY---GLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C  G++    A L  +   G   D I +  +L+ +  + +   A+     ++
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFSCKQG 306
            + GC P + +Y IL++ +C +     A+E+L  M  +G  C PD+V+Y +++N   K+G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             D A    + +L RG+ PN +TY++++ +L      D   ++L  M +    P   TYN
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +++G C  G    AI    +M S   +PD+VTYN+++  LCK G   EA ++   +   
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P + TY TL+ G A KG + +   L   M+ NGI P+      LI  + +  +V++A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + +  ++ ++G       Y  VI  LCKS +V+ A++  E MI  R  P + V+++++  
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453

Query: 547 V 547
           +
Sbjct: 454 L 454



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 211/444 (47%), Gaps = 2/444 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE D  T N ++   C  G+ T+A K+ D M +R   P+      L++G      
Sbjct: 297 SDG--VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  P+   +++++    K+G++  A+ +  +M   G  PD +TY T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G+ + A+ +++  + +   P  I Y  LI  +C      +A E++ +M   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D + +NS+++  CK+G+  ++  + + ++  G++P+ ITY+TL+      G  D   
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P   TYN LING CK   ++ A+  F +M S    PDI+TYN +L  L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +      A +L   +  S     L TYN ++ GL K    ++A+ ++  +    +  + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  + +EA DL   +   G       Y L+   L +   ++    +   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 528 MISSRYKPDDTVFSTIVKKVADDG 551
           M  +    +  + ++IV+K+   G
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRG 738



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 51/451 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +LQ + ++G L +   L+D+M R    P+ +    LI    +  ++++A  V   M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM--FD-- 234
              G  PDT+TY  ++G LCK G++  A+   ++M      P  I YN+++ ++  FD  
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 235 -------------------------------NGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                                           G+  ++   +   +R G  P +ITY+ L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+  C    +  A ++L  M   G  PD VTYN+L+N  CK  + +DA+++   + S G+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ ITYN +L  L       A  ++   + E+     + TYNI+++GLCK  L D A+ 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F  +   + Q +  T+N ++GAL K G  +EA  L   L+ +   P + TY+ + + L 
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           ++G +E+   L+  M ENG + +     +++                +++ +RG+  R  
Sbjct: 701 EQGLLEELDDLFLSMEENGCTANSRMLNSIV----------------RKLLQRGDITRAG 744

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            Y  +I     S +   A   L+L+   +Y+
Sbjct: 745 TYLFMIDEKHFSLEASTASLFLDLLSGGKYQ 775



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 139/306 (45%), Gaps = 40/306 (13%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH--SPTVFTYN 366
           +DA  V + LL RG   +    N  L  +       AV +   +    +   +P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 367 ILINGLCKYGLVDRAINSFNQMVSK----------------------------------- 391
           ILI   C  G +D    +   ++ K                                   
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 392 -NCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLIDGLAKKGCM 448
             C P++ +YN +L  LC E    EAL+LL ++  +G  C P +++Y T+I+G  K+G +
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           +KA   Y +M++ GI P+ +T+ ++I   C+A  +++A+++L  + K G       Y  +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +HG C S +   AI  L+ M S   +PD   +++++  +  +G   EA K++  + +  +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 569 FEKGTT 574
             + TT
Sbjct: 336 KPEITT 341


>gi|255581786|ref|XP_002531694.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528670|gb|EEF30685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 821

 Score =  231 bits (590), Expect = 5e-58,   Method: Compositional matrix adjust.
 Identities = 143/482 (29%), Positives = 237/482 (49%), Gaps = 39/482 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C +GK+ +A  + + + + +  PD     +LI G  R  +++KA +V   M
Sbjct: 199 TFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRM 258

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+++TY+ ++ GLC  G+I  A+ +L+EM+  G EP V TY   + ++ D G+ 
Sbjct: 259 VKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRV 318

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI   +   +KGC P + TYT +I  + +   +  AI +   M  EG  P+ VTYN+L
Sbjct: 319 DDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNAL 378

Query: 299 VNFSCKQGKY-----------------------------------DDAVLVINNLLSRGM 323
           +N  C +G++                                   + A++V N +L  G 
Sbjct: 379 INELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGP 438

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P  +TYNTL+     RG  +   + L +M E++  P   TY  LI+G CK G +D A +
Sbjct: 439 SPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKLDSATS 498

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +M+     P+  TY  ++   CKEG ++ AL L   +  + CS  + TYN +I GL+
Sbjct: 499 FFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAIISGLS 558

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K     +A     +M E G+ P+ IT+ +LI G C+      A  +  E+ K+       
Sbjct: 559 KGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAH 618

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I+GLC+  KVD A    E +  +  +P    +ST+V  +  +G + EA +L + +
Sbjct: 619 TYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQLVENM 674

Query: 564 IE 565
            E
Sbjct: 675 KE 676



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 124/433 (28%), Positives = 210/433 (48%), Gaps = 4/433 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C+ G+   A K+ D M     + +      +I+GL  +D IEKA  V   M
Sbjct: 374 TYNALINELCTEGRFGIALKIFDWMEGHGTLANAQTYNQIIKGLFGMDDIEKAMVVFNKM 433

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P  +TYN ++    KRG + +A   L  M  S CEPD  TY  ++      GK 
Sbjct: 434 LKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYMMKESNCEPDERTYCELISGFCKGGKL 493

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F+ + L+ G  P   TYT +I+  CK+  I  A+ + + M   GCS  I TYN++
Sbjct: 494 DSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALSLFERMEENGCSASIETYNAI 553

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K  ++ +A      +  +G++PN+ITY +L++ L      +   KI   M + + 
Sbjct: 554 ISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLCKNTATNLAFKIFHEMEKKNC 613

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  LI GLC+ G VD A     ++    C+P I TY+T++  LC+EG  NEA Q
Sbjct: 614 LPNAHTYTSLIYGLCQEGKVDAA----ERLTENGCEPTIDTYSTLVSGLCREGRSNEASQ 669

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +     SP +  Y +L+    K   ++ A+ ++  M   G  P    ++ LI   C
Sbjct: 670 LVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLMAVKGFQPHLFIYKVLICALC 729

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              + EEA+++ + + K+        + +++ GL +    D+ ++ L LM S    P   
Sbjct: 730 GVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLH 789

Query: 539 VFSTIVKKVADDG 551
            +  + ++++  G
Sbjct: 790 TYIILARELSKVG 802



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 194/408 (47%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+  L + D +  A  V   +  SG  P  +T+N M+  LCK+G+++ A+ + +++    
Sbjct: 168 LLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFNKIFQFD 227

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PD  TY +++     N K  +A   +   ++ GC P  +TY+ LI  +C +  I  A+
Sbjct: 228 LCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEGRIGEAM 287

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++L++M  +G  P + TY   ++  C  G+ DDA+ ++ ++  +G  P+  TY  ++  L
Sbjct: 288 DMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYTAIISGL 347

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +    +   M +    P   TYN LIN LC  G    A+  F+ M       + 
Sbjct: 348 FRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGHGTLANA 407

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            TYN ++  L     + +A+ + + +     SP ++TYNTLI    K+G +  A      
Sbjct: 408 QTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNATRFLYM 467

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M E+   PD+ T+  LI GFC+  +++ A     E+ K G       Y  +I G CK  K
Sbjct: 468 MKESNCEPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGK 527

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +D+A+ + E M  +        ++ I+  ++      EA K   K+ E
Sbjct: 528 IDVALSLFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTE 575



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/333 (27%), Positives = 163/333 (48%), Gaps = 4/333 (1%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E DE+T  +++  FC  GKL  A+     M +    P+      +I G  +  +I+ A  
Sbjct: 474 EPDERTYCELISGFCKGGKLDSATSFFYEMLKCGISPNQWTYTAMIDGYCKEGKIDVALS 533

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + M  +G      TYN ++ GL K  +   A     +M+  G +P+ ITY +++  + 
Sbjct: 534 LFERMEENGCSASIETYNAIISGLSKGNRFSEAEKFCAKMTEQGLQPNTITYTSLINGLC 593

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            N     A   + +  +K C P   TYT LI  +C++ G   A E L +    GC P I 
Sbjct: 594 KNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQE-GKVDAAERLTE---NGCEPTID 649

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY++LV+  C++G+ ++A  ++ N+  +G+ P+   Y +LL +       D   +I ++M
Sbjct: 650 TYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKVDCALEIFNLM 709

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P +F Y +LI  LC     + A+N F  ++ K    D++ +  ++  L +EG  
Sbjct: 710 AVKGFQPHLFIYKVLICALCGVSRAEEALNIFQSLLKKQWNSDLIVWTVLVDGLLQEGDS 769

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +  ++ L+L+   +C+P L TY  L   L+K G
Sbjct: 770 DLCMKFLYLMESRNCTPSLHTYIILARELSKVG 802



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 149/309 (48%)

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           L ++  L+ Q+ K   +  A  V   +   G  P ++T+N+++N  CK+GK  +AVLV N
Sbjct: 162 LYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSLLTFNTMINILCKKGKVQEAVLVFN 221

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +    + P++ TY +L+         D   ++ D M +   +P   TY+ LINGLC  G
Sbjct: 222 KIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDRMVKDGCNPNSVTYSTLINGLCNEG 281

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +  A++   +M  K  +P + TY   + +LC  G +++A+ L+  +    CSP + TY 
Sbjct: 282 RIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGRVDDAINLVRSMGKKGCSPSVQTYT 341

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            +I GL + G ME A+ +Y +M++ G+ P+ +T+  LI   C   +   A+ +   +   
Sbjct: 342 AIISGLFRAGKMELAIGMYHKMLKEGLVPNTVTYNALINELCTEGRFGIALKIFDWMEGH 401

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       Y  +I GL     ++ A+ V   M+     P    ++T++ +    G    A
Sbjct: 402 GTLANAQTYNQIIKGLFGMDDIEKAMVVFNKMLKDGPSPTVVTYNTLIVENLKRGYLNNA 461

Query: 557 YKLWQKLIE 565
            +    + E
Sbjct: 462 TRFLYMMKE 470



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 62/228 (27%), Positives = 124/228 (54%), Gaps = 6/228 (2%)

Query: 344 DAVDKILDIMNEASHSP------TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
           D + ++ D ++  S S       T++++N L+  L K+ +V  A N + Q+ S   +P +
Sbjct: 138 DELKRVTDFLHGISSSDSGLFGFTLYSFNTLLLQLGKFDMVTSAQNVYAQIFSSGVKPSL 197

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +T+NT++  LCK+G + EA+ + + +      P   TY +LI G  +   ++KA  ++ +
Sbjct: 198 LTFNTMINILCKKGKVQEAVLVFNKIFQFDLCPDAFTYTSLILGHCRNRKLDKAFEVFDR 257

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+++G +P+ +T+ TLI G C   ++ EA+D+L+E+ ++G +     Y + I  LC   +
Sbjct: 258 MVKDGCNPNSVTYSTLINGLCNEGRIGEAMDMLEEMTEKGIEPTVYTYTVPISSLCDIGR 317

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           VD AI ++  M      P    ++ I+  +   G  E A  ++ K+++
Sbjct: 318 VDDAINLVRSMGKKGCSPSVQTYTAIISGLFRAGKMELAIGMYHKMLK 365



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 62/242 (25%), Positives = 111/242 (45%), Gaps = 10/242 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C       A K+   M ++N +P+ H   +LI GL +  +++ A ++ +  
Sbjct: 584 TYTSLINGLCKNTATNLAFKIFHEMEKKNCLPNAHTYTSLIYGLCQEGKVDAAERLTE-- 641

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  P   TY+ +V GLC+ G+   A  L++ M   G  P +  Y ++L     + K 
Sbjct: 642 --NGCEPTIDTYSTLVSGLCREGRSNEASQLVENMKEKGLSPSMEIYCSLLVAHCKSLKV 699

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD---DMAIEGCSPDIVTY 295
             A+  +     KG  P+L  Y +LI   C  CG++RA E L+    +  +  + D++ +
Sbjct: 700 DCALEIFNLMAVKGFQPHLFIYKVLI---CALCGVSRAEEALNIFQSLLKKQWNSDLIVW 756

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             LV+   ++G  D  +  +  + SR   P+  TY  L   L   G     D+I + + E
Sbjct: 757 TVLVDGLLQEGDSDLCMKFLYLMESRNCTPSLHTYIILARELSKVGKSIGTDQIGNRLRE 816

Query: 356 AS 357
            S
Sbjct: 817 VS 818


>gi|125542792|gb|EAY88931.1| hypothetical protein OsI_10416 [Oryza sativa Indica Group]
          Length = 796

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 133/463 (28%), Positives = 241/463 (52%), Gaps = 1/463 (0%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           +L +  G  +  D  T N +L   C +G L +A  L+  M R    P       L+    
Sbjct: 230 TLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDGIAPTQPTYNTLVSAFA 289

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE-PDV 222
           R+  I++A+KV++ M   G  PD  TYN++  GLC+ G++  A  L DEM   G   PDV
Sbjct: 290 RLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAFRLKDEMERLGTALPDV 349

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           +TYNT++   F       A+   ++   KG  P L+T+ I+++ +CK+  +  A+  L+ 
Sbjct: 350 VTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKSLCKEGKLEEALGKLEK 409

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           +A EG +PD++TYN+L++  CK G    A  +++ ++ +G++ ++ T NT+L++L     
Sbjct: 410 IAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMDTFTLNTVLYNLCKMKR 469

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           ++  +++L    +    P   +Y  ++    K    + A+  ++QM+ +   P I TYNT
Sbjct: 470 YEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNT 529

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LC+   L EA+  L+        P   TYN +I    K+G +E A   + +M+EN 
Sbjct: 530 LIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENS 589

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             PD +T  TL+ G C   ++++A+ L +   ++G K+    Y  +I  +CK   VD A+
Sbjct: 590 FKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTAL 649

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              + M     +PD   ++ ++  +++ G +EEA+ +  KL +
Sbjct: 650 HFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHNMLHKLAD 692



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 220/469 (46%), Gaps = 39/469 (8%)

Query: 136 ASKLIDIMARRNQI-PDFHFCINLIRGLIR-IDRIEKAS-KVLQIMVMSGGVPDTITYNM 192
           A++L+  + RR  + P       ++  L R    + +AS  V + ++     P+  T+N+
Sbjct: 154 AAQLLHSLRRRRGVRPSLQAANAVLSALSRSPSTLPQASLDVFRSLIELRLHPNHYTFNL 213

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           +V   C +G +  A+A L  M   G  PD +TYNT+L      G   +A        R G
Sbjct: 214 LVHTHCSKGTLADALATLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKRDG 273

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P   TY  L+    +   I +A +V++ M   G  PD+ TYN L    C+ GK D+A 
Sbjct: 274 IAPTQPTYNTLVSAFARLGWIKQATKVVESMTAYGFEPDLRTYNVLAMGLCQAGKVDEAF 333

Query: 313 LVINNLLSRGME-PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
            + + +   G   P+ +TYNTL+ +     C     ++L+ M +    PT+ T+NI++  
Sbjct: 334 RLKDEMERLGTALPDVVTYNTLVDACFKWRCSSDALRLLEEMRDKGVKPTLVTHNIVVKS 393

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL-------------- 417
           LCK G ++ A+    ++  +   PD++TYNT++ A CK G + +A               
Sbjct: 394 LCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEMVGKGLKMD 453

Query: 418 ---------------------QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
                                +LLH        P  ++Y T++    K+   E A+ L+ 
Sbjct: 454 TFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNPEPALRLWD 513

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           QM+E  + P   T+ TLI G CR ++++EA+D L E  ++G     + Y ++IH  CK  
Sbjct: 514 QMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNIIIHAYCKEG 573

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++ A +    M+ + +KPD    +T++  +   G  ++A KL++  +E
Sbjct: 574 DLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVE 622



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 192/404 (47%), Gaps = 9/404 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T+N ++++ C  GKL +A   ++ +A     PD      LI    +   + KA  ++  M
Sbjct: 386 THNIVVKSLCKEGKLEEALGKLEKIAEEGLAPDVITYNTLIDAYCKAGNVAKAFTLMDEM 445

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G   DT T N ++  LCK  +   A  LL      G  PD ++Y T++   F     
Sbjct: 446 VGKGLKMDTFTLNTVLYNLCKMKRYEDAEELLHSPPQRGFVPDEVSYGTVMAAYFKEYNP 505

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A+  W   + +   P + TY  LI+ +C+   +  AI+ L++   +G  PD  TYN +
Sbjct: 506 EPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKLNEFVEKGLVPDETTYNII 565

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G  ++A    N ++    +P+ +T NTL++ L   G  D   K+ +   E   
Sbjct: 566 IHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGKLDKALKLFESWVEKGK 625

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              V TYN LI  +CK G VD A++ F+ M  K  QPD  TYN VL AL + G   EA  
Sbjct: 626 KVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNVVLSALSEAGRSEEAHN 685

Query: 419 LLHLLNGS-----SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +LH L  S     S +  L+  ++  +   K+   +       +  +N +     T+   
Sbjct: 686 MLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESSEKAQDNALE----TYMER 741

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           + G C   Q++EA  +L E+ ++G  +  S Y  ++ GL K +K
Sbjct: 742 LNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIKRQK 785



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 141/295 (47%), Gaps = 1/295 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE +   ++  +        A +L D M  R  IP       LI+GL R++R+++A   L
Sbjct: 488 DEVSYGTVMAAYFKEYNPEPALRLWDQMIERKLIPSISTYNTLIKGLCRMERLKEAIDKL 547

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              V  G VPD  TYN+++   CK G + +A    ++M  +  +PDV+T NT++  +  +
Sbjct: 548 NEFVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLH 607

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A+  ++  + KG    +ITY  LI+ +CK   +  A+   DDM ++G  PD  TY
Sbjct: 608 GKLDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTY 667

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMN 354
           N +++   + G+ ++A  +++ L   G    S     L  S        +   K     +
Sbjct: 668 NVVLSALSEAGRSEEAHNMLHKLADSGKLSQSFACPLLKPSSADEADVKEHEGKPEAESS 727

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           E +    + TY   +NGLC  G +  A    ++M+ K    D  TY T++  L K
Sbjct: 728 EKAQDNALETYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGLIK 782



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 71/243 (29%), Positives = 112/243 (46%), Gaps = 23/243 (9%)

Query: 112 FVEN----DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           FVE     DE T N I+  +C  G L +A +  + M   +  PD   C  L+ GL    +
Sbjct: 550 FVEKGLVPDETTYNIIIHAYCKEGDLENAFRFHNKMVENSFKPDVVTCNTLMNGLCLHGK 609

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           ++KA K+ +  V  G   D ITYN ++  +CK G + +A+   D+M V G +PD  TYN 
Sbjct: 610 LDKALKLFESWVEKGKKVDVITYNTLIQSMCKVGDVDTALHFFDDMEVKGLQPDAFTYNV 669

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKG-------CPPYLITYTILIEQVCKQC---GIARAI 277
           +L  + + G+ ++A          G       CP  L+  +   E   K+      A + 
Sbjct: 670 VLSALSEAGRSEEAHNMLHKLADSGKLSQSFACP--LLKPSSADEADVKEHEGKPEAESS 727

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E   D A+E       TY   +N  C  G+  +A  V++ ++ +GM  +  TY TL+  L
Sbjct: 728 EKAQDNALE-------TYMERLNGLCTGGQLKEAKAVLDEMMQKGMPVDCSTYITLMEGL 780

Query: 338 GSR 340
             R
Sbjct: 781 IKR 783


>gi|449439615|ref|XP_004137581.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Cucumis sativus]
          Length = 857

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 229/443 (51%), Gaps = 3/443 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQI 177
           T NK++   C +G + ++ KL   + +R   P+ F F I  I+GL R   I++A+++L+ 
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI-FIQGLCRKGAIDEAARLLES 276

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +V  G  PD I+YN ++ G CK  ++  A   L +M  SG EP+  TYNTI+      G 
Sbjct: 277 IVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGM 336

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            + A    +D + KG  P   TY+ LI  +C    + RA+ V  +   +G    I+ YN+
Sbjct: 337 MQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNT 396

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           LV    KQG    A+ ++ +++  G  P+  TYN +++ L   GC    + IL+      
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P +FT+N LI+G CK   +D+AI   + M+S    PD++TYNT+L  LCK   L+  +
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
                +    C+P +ITYN LI+   K   + +AM L+ +M   G++PD +T  TLI G 
Sbjct: 517 DTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           C   ++++A +L   I K      ++A + ++I+  C+   V MA ++   M  S   PD
Sbjct: 577 CSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPD 636

Query: 537 DTVFSTIVKKVADDGMTEEAYKL 559
           +  +  ++      G  + A+  
Sbjct: 637 NYTYRVMIDSYCKTGNIDLAHTF 659



 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 220/421 (52%), Gaps = 1/421 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  +Q  C +G + +A++L++ +      PD      LI G  +  ++ +A   L  M
Sbjct: 253 TFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V SG  P+  TYN ++ G CK G +++A  +L +    G  PD  TY++++  + ++G  
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDM 372

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + + + KG    +I Y  L++ + KQ  + +A++++ DM   GCSPDI TYN +
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLV 432

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  CK G   DA  ++N+ +++G  P+  T+NTL+     +   D   +ILD M     
Sbjct: 433 VNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGI 492

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V TYN L+NGLCK   +D  +++F  M+ K C P+I+TYN ++ + CK+  ++EA++
Sbjct: 493 TPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAME 552

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGISPDDITHRTLIWGF 477
           L   +     +P ++T  TLI GL   G ++KA  L+  +  E   S        +I  F
Sbjct: 553 LFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAF 612

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C    V  A  L  ++G       N  YR++I   CK+  +D+A   L   IS    P  
Sbjct: 613 CEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSF 672

Query: 538 T 538
           T
Sbjct: 673 T 673



 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 228/443 (51%), Gaps = 3/443 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F       +A  L D M ++   PD      LI  L +   ++++ K+   ++  G
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  T+N+ + GLC++G I  A  LL+ +   G  PDVI+YNT++     + K  +A 
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAE 306

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            +    +  G  P   TY  +I   CK   +  A ++L D   +G  PD  TY+SL+N  
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G  + A+ V    + +G + + I YNTL+  L  +G      +++  M E   SP +
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TYN+++NGLCK G +  A    N  ++K C PDI T+NT++   CK+  +++A+++L  
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P +ITYNTL++GL K   ++  +  +  M+E G +P+ IT+  LI  FC+  +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK--PDDTVF 540
           V EA++L KE+  RG          +I GLC + ++D A ++  + I   YK      +F
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF-VTIEKEYKFSYSTAIF 605

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++    +      A KL+ K+
Sbjct: 606 NIMINAFCEKLNVSMAEKLFHKM 628



 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 236/494 (47%), Gaps = 35/494 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N I+      G  + A K+   M      PD +     ++      R   A ++L  
Sbjct: 112 QSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNN 171

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G   + ++Y  ++ G  K      A  L DEM   G  PD++T+N ++  +   G 
Sbjct: 172 MPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGN 231

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            +++   +   +++G  P L T+ I I+ +C++  I  A  +L+ +  EG +PD+++YN+
Sbjct: 232 VQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNT 291

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   CK  K  +A   ++ +++ G+EPN  TYNT+++     G     DKIL       
Sbjct: 292 LICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351

Query: 358 HSPTVFTYNILINGLC-----------------------------------KYGLVDRAI 382
             P  FTY+ LINGLC                                   K GLV +A+
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                M+   C PDI TYN V+  LCK G L++A  +L+      C P + T+NTLIDG 
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGY 471

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+  M+KA+ +   M+ +GI+PD IT+ TL+ G C+A +++  VD  K + ++G     
Sbjct: 472 CKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI 531

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y ++I   CK +KV  A+++ + M +    PD     T++  +  +G  ++AY+L+  
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVT 591

Query: 563 LIEWKVFEKGTTLL 576
           + +   F   T + 
Sbjct: 592 IEKEYKFSYSTAIF 605



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 217/461 (47%), Gaps = 39/461 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +E T N I+  FC  G + +A K++     +  IPD     +LI GL     + +A 
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V    +  G     I YN +V GL K+G +  A+ L+ +M   GC PD+ TYN ++  +
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A G   D + KGC P + T+  LI+  CKQ  + +AIE+LD M   G +PD+
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TYN+L+N  CK  K D+ V     +L +G  PN ITY                      
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITY---------------------- 534

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
                        NILI   CK   V  A+  F +M ++   PDIVT  T++  LC  G 
Sbjct: 535 -------------NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 413 LNEALQLLHLLNGS-SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           L++A +L   +      S     +N +I+   +K  +  A  L+ +M  +  +PD+ T+R
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            +I  +C+   ++ A   L E   +G     +    V++ LC + ++  A+ ++ LM+ +
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 532 RYKPDD--TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFE 570
              P++  ++F    K+VA   +  E Y L +  I +  +E
Sbjct: 702 GIVPEEVNSIFEADKKEVAAPKIVVE-YLLKKSHITYYSYE 741



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 210/471 (44%), Gaps = 78/471 (16%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC   KL +A   +  M      P+      +I G  +   ++ A K+L+  + 
Sbjct: 290 NTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMF 349

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +PD  TY+ ++ GLC  G +  A+A+  E    G +  +I YNT+++ +   G   Q
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQ 409

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   KD +  GC P + TY +++  +CK   ++ A  +L+D   +GC PDI T+N+L++
Sbjct: 410 ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CKQ   D A+ +++ +LS G+ P+ ITYNTLL+ L      D V      M E   +P
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TYNILI   CK   V  A+  F +M ++   PDIVT  T++  LC  G L++A +L 
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589

Query: 421 ------------------------------------HLLNGSSCSPCLITYNTLIDGLAK 444
                                               H + GS C+P   TY  +ID   K
Sbjct: 590 VTIEKEYKFSYSTAIFNIMINAFCEKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649

Query: 445 KG-------------------------------C----MEKAMVLYGQMMENGISPDDIT 469
            G                               C    + +A+V+   M++NGI P+++ 
Sbjct: 650 TGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709

Query: 470 HRTLIWGFCRADQVEEAV-DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
                     AD+ E A   ++ E   + + +   +Y L+  G+   K V+
Sbjct: 710 ------SIFEADKKEVAAPKIVVEYLLKKSHITYYSYELLYDGIRNRKVVE 754



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 183/358 (51%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           ++G+++ A+ + + M    CEP V +YN I+  + + G F QA   +      G  P + 
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T+TI ++  C       A+ +L++M  +GC  + V+Y ++++   K+    +A  + + +
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L +G+ P+ +T+N L+H L  +G     +K+   + +    P +FT+NI I GLC+ G +
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A      +VS+   PD+++YNT++   CK   L EA   LH +  S   P   TYNT+
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I+G  K G M+ A  +    M  G  PD+ T+ +LI G C    +  A+ +  E  ++G 
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           K     Y  ++ GL K   V  A+Q+++ M+     PD   ++ +V  +   G   +A
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 192/389 (49%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           I ++R   R  ++++A  V + M      P   +YN ++  L + G    A  +   M  
Sbjct: 80  IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G  PDV T+   +++    G+   A+    +   +GC    ++Y  +I    K+     
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A  + D+M  +G  PDI+T+N L++  CK+G   ++  + + ++ RG+ PN  T+N  + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L  +G  D   ++L+ +     +P V +YN LI G CK+  +  A    ++MV+   +P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +  TYNT++   CK GM+  A ++L         P   TY++LI+GL   G M +AM ++
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            + ME G     I + TL+ G  +   V +A+ L+K++ + G       Y LV++GLCK 
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIV 544
             +  A  +L   I+    PD   F+T++
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLI 468


>gi|222613080|gb|EEE51212.1| hypothetical protein OsJ_32033 [Oryza sativa Japonica Group]
          Length = 1144

 Score =  231 bits (590), Expect = 6e-58,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 255/521 (48%), Gaps = 41/521 (7%)

Query: 83  HVLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +V + N  L+GL    +S +      +   DG     D  +   ++  F   G L  A  
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
               M  R  +P+     ++I  L +   ++KA +VL  MV +G +P+  TYN +V G C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
             GQ + AI  L +M   G EPDV+TYN+++  +  NG+  +A   +    ++G  P + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 259 TY-----------------------------------TILIEQVCKQCGIARAIEVLDDM 283
           TY                                   +ILI    KQ  + +A+ V   M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             +G +PD VTY +++   CK G+ +DA+     ++   + P +I YN+L+HSL     W
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 344 D-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           D A + IL++++      T+F +N +I+  CK G V  +   F+ MV    +PDI+TY+T
Sbjct: 461 DKAKELILEMLDRGICLDTIF-FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C  G ++EA +LL  +      P  +TYNTLI+G  K   ME A+VL+ +M  +G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +SPD IT+  ++ G  +  +   A +L   I + G ++  S Y +++HGLCK+   D A+
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++ + +  +  + +   F+ ++  +   G  +EA  L+  L
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 221/444 (49%), Gaps = 38/444 (8%)

Query: 158 LIRGLIRIDRIEKASK-VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           L++GL    R   A   VL+ M   G +P+  +YN+++ GLC   + + A+ LL  M   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 217 G--CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           G  C PDV++Y T++   F  G   +A G + + L +G  P ++TY+ +I  +CK   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 275 RAIEVLDDM---------------------------AI--------EGCSPDIVTYNSLV 299
           +A+EVL  M                           AI        +G  PD+VTYNSL+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           ++ CK G+  +A  + +++  RG++P   TY TLL    ++G    +  +LD+M      
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P  + ++ILI    K G VD+A+  F++M  +   PD VTY TV+G LCK G + +A++ 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +     SP  I YN+LI  L      +KA  L  +M++ GI  D I   ++I   C+
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             +V E+  L   + + G K     Y  +I G C + K+D A ++L  M+S   KPD   
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           ++T++         E+A  L++++
Sbjct: 552 YNTLINGYCKISRMEDALVLFREM 575



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 208/421 (49%), Gaps = 11/421 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + D + RR +    +    L   L  + R   A+ V +   M  +G     P+  T
Sbjct: 37  DARHVFDELLRRGRGASIY---GLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C  G++    A L  +   G   D I +  +L+ +  + +   A+     ++
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFSCKQG 306
            + GC P + +Y IL++ +C +     A+E+L  M  +G  C PD+V+Y +++N   K+G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             D A    + +L RG+ PN +TY++++ +L      D   ++L  M +    P   TYN
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +++G C  G    AI    +M S   +PD+VTYN+++  LCK G   EA ++   +   
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P + TY TL+ G A KG + +   L   M+ NGI P+      LI  + +  +V++A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + +  ++ ++G       Y  VI  LCKS +V+ A++  E MI  R  P + V+++++  
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453

Query: 547 V 547
           +
Sbjct: 454 L 454



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 211/444 (47%), Gaps = 2/444 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE D  T N ++   C  G+ T+A K+ D M +R   P+      L++G      
Sbjct: 297 SDG--VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  P+   +++++    K+G++  A+ +  +M   G  PD +TY T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G+ + A+ +++  + +   P  I Y  LI  +C      +A E++ +M   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D + +NS+++  CK+G+  ++  + + ++  G++P+ ITY+TL+      G  D   
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P   TYN LING CK   ++ A+  F +M S    PDI+TYN +L  L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +      A +L   +  S     L TYN ++ GL K    ++A+ ++  +    +  + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  + +EA DL   +   G       Y L+   L +   ++    +   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 528 MISSRYKPDDTVFSTIVKKVADDG 551
           M  +    +  + ++IV+K+   G
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRG 738



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 51/451 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +LQ + ++G L +   L+D+M R    P+ +    LI    +  ++++A  V   M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM--FD-- 234
              G  PDT+TY  ++G LCK G++  A+   ++M      P  I YN+++ ++  FD  
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 235 -------------------------------NGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                                           G+  ++   +   +R G  P +ITY+ L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+  C    +  A ++L  M   G  PD VTYN+L+N  CK  + +DA+++   + S G+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ ITYN +L  L       A  ++   + E+     + TYNI+++GLCK  L D A+ 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F  +   + Q +  T+N ++GAL K G  +EA  L   L+ +   P + TY+ + + L 
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           ++G +E+   L+  M ENG + +     +++                +++ +RG+  R  
Sbjct: 701 EQGLLEELDDLFLSMEENGCTANSRMLNSIV----------------RKLLQRGDITRAG 744

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            Y  +I     S +   A   L+L+   +Y+
Sbjct: 745 TYLFMIDEKHFSLEASTASLFLDLLSGGKYQ 775



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 139/306 (45%), Gaps = 40/306 (13%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH--SPTVFTYN 366
           +DA  V + LL RG   +    N  L  +       AV +   +    +   +P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 367 ILINGLCKYGLVDRAINSFNQMVSK----------------------------------- 391
           ILI   C  G +D    +   ++ K                                   
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 392 -NCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLIDGLAKKGCM 448
             C P++ +YN +L  LC E    EAL+LL ++  +G  C P +++Y T+I+G  K+G +
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           +KA   Y +M++ GI P+ +T+ ++I   C+A  +++A+++L  + K G       Y  +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +HG C S +   AI  L+ M S   +PD   +++++  +  +G   EA K++  + +  +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 569 FEKGTT 574
             + TT
Sbjct: 336 KPEITT 341


>gi|115482730|ref|NP_001064958.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|41152691|dbj|BAD08215.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113639567|dbj|BAF26872.1| Os10g0497300 [Oryza sativa Japonica Group]
 gi|215693996|dbj|BAG89195.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 794

 Score =  231 bits (589), Expect = 7e-58,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 255/521 (48%), Gaps = 41/521 (7%)

Query: 83  HVLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +V + N  L+GL    +S +      +   DG     D  +   ++  F   G L  A  
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
               M  R  +P+     ++I  L +   ++KA +VL  MV +G +P+  TYN +V G C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
             GQ + AI  L +M   G EPDV+TYN+++  +  NG+  +A   +    ++G  P + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 259 TY-----------------------------------TILIEQVCKQCGIARAIEVLDDM 283
           TY                                   +ILI    KQ  + +A+ V   M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             +G +PD VTY +++   CK G+ +DA+     ++   + P +I YN+L+HSL     W
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 344 D-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           D A + IL++++      T+F +N +I+  CK G V  +   F+ MV    +PDI+TY+T
Sbjct: 461 DKAKELILEMLDRGICLDTIF-FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C  G ++EA +LL  +      P  +TYNTLI+G  K   ME A+VL+ +M  +G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +SPD IT+  ++ G  +  +   A +L   I + G ++  S Y +++HGLCK+   D A+
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++ + +  +  + +   F+ ++  +   G  +EA  L+  L
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/444 (30%), Positives = 221/444 (49%), Gaps = 38/444 (8%)

Query: 158 LIRGLIRIDRIEKASK-VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           L++GL    R   A   VL+ M   G +P+  +YN+++ GLC   + + A+ LL  M   
Sbjct: 132 LLKGLCADKRTSDAMDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDD 191

Query: 217 G--CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           G  C PDV++Y T++   F  G   +A G + + L +G  P ++TY+ +I  +CK   + 
Sbjct: 192 GGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMD 251

Query: 275 RAIEVLDDM---------------------------AI--------EGCSPDIVTYNSLV 299
           +A+EVL  M                           AI        +G  PD+VTYNSL+
Sbjct: 252 KAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLM 311

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           ++ CK G+  +A  + +++  RG++P   TY TLL    ++G    +  +LD+M      
Sbjct: 312 DYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIH 371

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P  + ++ILI    K G VD+A+  F++M  +   PD VTY TV+G LCK G + +A++ 
Sbjct: 372 PNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRY 431

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +     SP  I YN+LI  L      +KA  L  +M++ GI  D I   ++I   C+
Sbjct: 432 FEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIIDSHCK 491

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             +V E+  L   + + G K     Y  +I G C + K+D A ++L  M+S   KPD   
Sbjct: 492 EGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEATKLLASMVSVGMKPDCVT 551

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           ++T++         E+A  L++++
Sbjct: 552 YNTLINGYCKISRMEDALVLFREM 575



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 208/421 (49%), Gaps = 11/421 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + D + RR +    +    L   L  + R   A+ V +   M  +G     P+  T
Sbjct: 37  DARHVFDELLRRGRGASIY---GLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C  G++    A L  +   G   D I +  +L+ +  + +   A+     ++
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFSCKQG 306
            + GC P + +Y IL++ +C +     A+E+L  M  +G  C PD+V+Y +++N   K+G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             D A    + +L RG+ PN +TY++++ +L      D   ++L  M +    P   TYN
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +++G C  G    AI    +M S   +PD+VTYN+++  LCK G   EA ++   +   
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P + TY TL+ G A KG + +   L   M+ NGI P+      LI  + +  +V++A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + +  ++ ++G       Y  VI  LCKS +V+ A++  E MI  R  P + V+++++  
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453

Query: 547 V 547
           +
Sbjct: 454 L 454



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 211/444 (47%), Gaps = 2/444 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE D  T N ++   C  G+ T+A K+ D M +R   P+      L++G      
Sbjct: 297 SDG--VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  P+   +++++    K+G++  A+ +  +M   G  PD +TY T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G+ + A+ +++  + +   P  I Y  LI  +C      +A E++ +M   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D + +NS+++  CK+G+  ++  + + ++  G++P+ ITY+TL+      G  D   
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P   TYN LING CK   ++ A+  F +M S    PDI+TYN +L  L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +      A +L   +  S     L TYN ++ GL K    ++A+ ++  +    +  + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  + +EA DL   +   G       Y L+   L +   ++    +   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 528 MISSRYKPDDTVFSTIVKKVADDG 551
           M  +    +  + ++IV+K+   G
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRG 738



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 51/451 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +LQ + ++G L +   L+D+M R    P+ +    LI    +  ++++A  V   M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM--FD-- 234
              G  PDT+TY  ++G LCK G++  A+   ++M      P  I YN+++ ++  FD  
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 235 -------------------------------NGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                                           G+  ++   +   +R G  P +ITY+ L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+  C    +  A ++L  M   G  PD VTYN+L+N  CK  + +DA+++   + S G+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ ITYN +L  L       A  ++   + E+     + TYNI+++GLCK  L D A+ 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F  +   + Q +  T+N ++GAL K G  +EA  L   L+ +   P + TY+ + + L 
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           ++G +E+   L+  M ENG + +     +++                +++ +RG+  R  
Sbjct: 701 EQGLLEELDDLFLSMEENGCTANSRMLNSIV----------------RKLLQRGDITRAG 744

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            Y  +I     S +   A   L+L+   +Y+
Sbjct: 745 TYLFMIDEKHFSLEASTASLFLDLLSGGKYQ 775



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 139/306 (45%), Gaps = 40/306 (13%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH--SPTVFTYN 366
           +DA  V + LL RG   +    N  L  +       AV +   +    +   +P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 367 ILINGLCKYGLVDRAINSFNQMVSK----------------------------------- 391
           ILI   C  G +D    +   ++ K                                   
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 392 -NCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLIDGLAKKGCM 448
             C P++ +YN +L  LC E    EAL+LL ++  +G  C P +++Y T+I+G  K+G +
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           +KA   Y +M++ GI P+ +T+ ++I   C+A  +++A+++L  + K G       Y  +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +HG C S +   AI  L+ M S   +PD   +++++  +  +G   EA K++  + +  +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 569 FEKGTT 574
             + TT
Sbjct: 336 KPEITT 341


>gi|46091165|dbj|BAD13711.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  231 bits (589), Expect = 8e-58,   Method: Compositional matrix adjust.
 Identities = 149/521 (28%), Positives = 255/521 (48%), Gaps = 41/521 (7%)

Query: 83  HVLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +V + N  L+GL    +S +      +   DG     D  +   ++  F   G L  A  
Sbjct: 161 NVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
               M  R  +P+     ++I  L +   ++KA +VL  MV +G +P+  TYN +V G C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
             GQ + AI  L +M   G EPDV+TYN+++  +  NG+  +A   +    ++G  P + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 259 TY-----------------------------------TILIEQVCKQCGIARAIEVLDDM 283
           TY                                   +ILI    KQ  + +A+ V   M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             +G +PD VTY +++   CK G+ +DA+     ++   + P +I YN+L+HSL     W
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 344 D-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           D A + IL++++      T+F +N +I+  CK G V  +   F+ MV    +PDI+TY+T
Sbjct: 461 DKAKELILEMLDRGICLDTIF-FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYST 519

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C  G ++EA +LL  +      P  +TYNTLI+G  K   ME A+VL+ +M  +G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +SPD IT+  ++ G  +  +   A +L   I + G ++  S Y +++HGLCK+   D A+
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++ + +  +  + +   F+ ++  +   G  +EA  L+  L
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 138/474 (29%), Positives = 231/474 (48%), Gaps = 38/474 (8%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK-VLQIMVMSGGVPD 186
           C  G+L      +  + ++  I D      +++GL    R   A   VL+ M   G +P+
Sbjct: 102 CCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRMTQLGCIPN 161

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDNGKFKQAIGF 244
             +YN+++ GLC   + + A+ LL  M   G  C PDV++Y T++   F  G   +A G 
Sbjct: 162 VFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGT 221

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM--------------------- 283
           + + L +G  P ++TY+ +I  +CK   + +A+EVL  M                     
Sbjct: 222 YHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCS 281

Query: 284 ------AI--------EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
                 AI        +G  PD+VTYNSL+++ CK G+  +A  + +++  RG++P   T
Sbjct: 282 SGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITT 341

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y TLL    ++G    +  +LD+M      P  + ++ILI    K G VD+A+  F++M 
Sbjct: 342 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMR 401

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +   PD VTY TV+G LCK G + +A++    +     SP  I YN+LI  L      +
Sbjct: 402 QQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWD 461

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KA  L  +M++ GI  D I   ++I   C+  +V E+  L   + + G K     Y  +I
Sbjct: 462 KAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLI 521

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            G C + K+D A ++L  M+S   KPD   ++T++         E+A  L++++
Sbjct: 522 DGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREM 575



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 116/421 (27%), Positives = 207/421 (49%), Gaps = 11/421 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + D + RR +    +    L   L  + R   A+ V +   M  +G     P+  T
Sbjct: 37  DARHVFDELLRRGRGASIY---GLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C  G++    A L  +   G   D I +  +L+ +  + +   A+     ++
Sbjct: 94  YGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMDIVLRRM 153

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFSCKQG 306
            + GC P + +Y IL++ +C       A+E+L  M  +G  C PD+V+Y +++N   K+G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             D A    + +L RG+ PN +TY++++ +L      D   ++L  M +    P   TYN
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +++G C  G    AI    +M S   +PD+VTYN+++  LCK G   EA ++   +   
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P + TY TL+ G A KG + +   L   M+ NGI P+      LI  + +  +V++A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + +  ++ ++G       Y  VI  LCKS +V+ A++  E MI  R  P + V+++++  
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453

Query: 547 V 547
           +
Sbjct: 454 L 454



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/444 (25%), Positives = 211/444 (47%), Gaps = 2/444 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE D  T N ++   C  G+ T+A K+ D M +R   P+      L++G      
Sbjct: 297 SDG--VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  P+   +++++    K+G++  A+ +  +M   G  PD +TY T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G+ + A+ +++  + +   P  I Y  LI  +C      +A E++ +M   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D + +NS+++  CK+G+  ++  + + ++  G++P+ ITY+TL+      G  D   
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAT 534

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P   TYN LING CK   ++ A+  F +M S    PDI+TYN +L  L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +      A +L   +  S     L TYN ++ GL K    ++A+ ++  +    +  + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  + +EA DL   +   G       Y L+   L +   ++    +   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 528 MISSRYKPDDTVFSTIVKKVADDG 551
           M  +    +  + ++IV+K+   G
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRG 738



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 51/451 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +LQ + ++G L +   L+D+M R    P+ +    LI    +  ++++A  V   M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM--FD-- 234
              G  PDT+TY  ++G LCK G++  A+   ++M      P  I YN+++ ++  FD  
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 235 -------------------------------NGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                                           G+  ++   +   +R G  P +ITY+ L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 520

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+  C    +  A ++L  M   G  PD VTYN+L+N  CK  + +DA+++   + S G+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ ITYN +L  L       A  ++   + E+     + TYNI+++GLCK  L D A+ 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F  +   + Q +  T+N ++GAL K G  +EA  L   L+ +   P + TY+ + + L 
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           ++G +E+   L+  M ENG + +     +++                +++ +RG+  R  
Sbjct: 701 EQGLLEELDDLFLSMEENGCTANSRMLNSIV----------------RKLLQRGDITRAG 744

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            Y  +I     S +   A   L+L+   +Y+
Sbjct: 745 TYLFMIDEKHFSLEASTASLFLDLLSGGKYQ 775



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 29/144 (20%), Positives = 68/144 (47%), Gaps = 3/144 (2%)

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P L TY  L+      G ++      G +++ G   D I    ++ G C   +  +A+D
Sbjct: 88  TPNLCTYGILMGSCCCAGRLDLGFAALGNVIKKGFIVDAIAFTPMLKGLCADKRTSDAMD 147

Query: 489 L-LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI--SSRYKPDDTVFSTIVK 545
           + L+ + + G      +Y +++ GLC   +   A+++L++M        PD   ++T++ 
Sbjct: 148 IVLRRMTQLGCIPNVFSYNILLKGLCDDNRSQEALELLQMMPDDGGDCPPDVVSYTTVIN 207

Query: 546 KVADDGMTEEAYKLWQKLIEWKVF 569
               +G  ++AY  + ++++  + 
Sbjct: 208 GFFKEGDLDKAYGTYHEMLDRGIL 231


>gi|357134934|ref|XP_003569069.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Brachypodium distachyon]
          Length = 642

 Score =  231 bits (589), Expect = 9e-58,   Method: Compositional matrix adjust.
 Identities = 135/465 (29%), Positives = 228/465 (49%), Gaps = 30/465 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +  T N +++  C   ++  A +++D MAR+   PD      +I  L ++DR+++A 
Sbjct: 158 VEPNVYTYNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEAR 217

Query: 173 KVLQIM------------------------------VMSGGVPDTITYNMMVGGLCKRGQ 202
            +L  M                              V  G  PDT+ Y  +VG  CK  +
Sbjct: 218 GILAEMTPVGASYNAVVHALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARE 277

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +R A A+L  M   GC P+V T+  +++  FD+GK   A+G W   + +G  P  I+Y +
Sbjct: 278 LRMACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNV 337

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI  +C    + RA+ V   M    C PD+ TY++L++   K G  D A+ + N++ + G
Sbjct: 338 LIRGLCHIGDLKRALFVFSCMGKSDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAG 397

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +PN + Y  ++  L  +  +D  + ++D M+  +  P   T+N LI  LC  G   RA+
Sbjct: 398 CKPNVVVYTNMVDVLCKKVMFDQAENLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRAL 457

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           N F+ M    C P+  TYN +L  L +EG   +AL++L  +        L++YNT I GL
Sbjct: 458 NVFHGMRRYGCPPNDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGL 517

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            +   +++AM+L G+M+  GI PD  T   +I  +C+   V  A  +L  +         
Sbjct: 518 CQMRMIKEAMILLGRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNI 577

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            AY  ++ GLC   K+D A+  L  M+     P++  ++ +V+ +
Sbjct: 578 VAYTSLMSGLCSQHKLDDAMVYLLKMLYEGICPNEATWNVLVRGI 622



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 212/439 (48%), Gaps = 5/439 (1%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +  N +L        +     + D M +    P+ +    LI+ L + DR+  A ++L  
Sbjct: 128 RVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGAARRMLDE 187

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD +++  ++  LCK  ++  A  +L EM+  G      +YN ++  +    +
Sbjct: 188 MARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGA-----SYNAVVHALCGQFR 242

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++      + + +G  P  + YT ++   CK   +  A  +L  M  EGC P++ T+  
Sbjct: 243 MREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTFTV 302

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           LV      GK  DA+ + N +++ G  P++I+YN L+  L   G       +   M ++ 
Sbjct: 303 LVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGKSD 362

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TY+ LI+G  K G +D A++ +N M +  C+P++V Y  ++  LCK+ M ++A 
Sbjct: 363 CLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQAE 422

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            L+  ++  +C P  +T+NTLI  L   G   +A+ ++  M   G  P+D T+  L+ G 
Sbjct: 423 NLIDKMSLENCPPNTLTFNTLIRSLCDLGRAGRALNVFHGMRRYGCPPNDRTYNELLHGL 482

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            R    E+A+ +L E+   G ++   +Y   I GLC+ + +  A+ +L  MI    +PD 
Sbjct: 483 FREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILLGRMIIQGIQPDA 542

Query: 538 TVFSTIVKKVADDGMTEEA 556
             F+ I+     +G    A
Sbjct: 543 FTFNAIIHAYCKEGNVRAA 561



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 76/308 (24%), Positives = 137/308 (44%), Gaps = 31/308 (10%)

Query: 287 GCS-PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           GC+ P +  YN L++   ++      V V +N+   G+EPN  TYN L+ +L       A
Sbjct: 121 GCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYTYNLLIKALCQNDRVGA 180

Query: 346 VDKILDIM-------NEASH-----------------------SPTVFTYNILINGLCKY 375
             ++LD M       +E SH                       +P   +YN +++ LC  
Sbjct: 181 ARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMTPVGASYNAVVHALCGQ 240

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
             +       ++MV +  +PD V Y +++GA CK   L  A  +L  +    C P + T+
Sbjct: 241 FRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELRMACAILARMVTEGCVPNVQTF 300

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
             L+ G    G +  A+ ++  M+  G +P  I++  LI G C    ++ A+ +   +GK
Sbjct: 301 TVLVKGFFDDGKVHDALGMWNWMVAEGWAPSTISYNVLIRGLCHIGDLKRALFVFSCMGK 360

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
                    Y  +I G  K+  +D+A+ +   M ++  KP+  V++ +V  +    M ++
Sbjct: 361 SDCLPDVRTYSTLIDGFSKAGDLDVAMSIWNDMTNAGCKPNVVVYTNMVDVLCKKVMFDQ 420

Query: 556 AYKLWQKL 563
           A  L  K+
Sbjct: 421 AENLIDKM 428



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/231 (25%), Positives = 109/231 (47%), Gaps = 14/231 (6%)

Query: 345 AVDKILDIMNEASH-----SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
           A D+ L     A H     +PTV  YN L++ L +  LV   +  ++ M     +P++ T
Sbjct: 105 AADRALKTFYRARHDLGCAAPTVRVYNHLLDALLRENLVAAVVPVYDNMRKAGVEPNVYT 164

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           YN ++ ALC+   +  A ++L  +    C P  +++ T+I  L K   +++A  +  +M 
Sbjct: 165 YNLLIKALCQNDRVGAARRMLDEMARKGCRPDEVSHTTIISALCKLDRLDEARGILAEMT 224

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
             G S + + H       C   ++ E   ++ E+  RG +    AY  ++   CK++++ 
Sbjct: 225 PVGASYNAVVH-----ALCGQFRMREVFLVVDEMVHRGLRPDTVAYTSIVGAFCKARELR 279

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFE 570
           MA  +L  M++    P+   F+ +VK   DDG   +A  +W     W V E
Sbjct: 280 MACAILARMVTEGCVPNVQTFTVLVKGFFDDGKVHDALGMWN----WMVAE 326



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 37/168 (22%), Positives = 76/168 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +++T N++L      G   DA +++  M               I GL ++  I++A  +L
Sbjct: 471 NDRTYNELLHGLFREGNCEDALRMLTEMLNHGFELSLVSYNTTISGLCQMRMIKEAMILL 530

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M++ G  PD  T+N ++   CK G +R+A  +L  M    C  +++ Y +++  +   
Sbjct: 531 GRMIIQGIQPDAFTFNAIIHAYCKEGNVRAAAWMLGRMDAVNCPRNIVAYTSLMSGLCSQ 590

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
            K   A+ +    L +G  P   T+ +L+  +    G    + ++D +
Sbjct: 591 HKLDDAMVYLLKMLYEGICPNEATWNVLVRGIFTHLGTIGPMHLIDHI 638


>gi|296087909|emb|CBI35192.3| unnamed protein product [Vitis vinifera]
          Length = 1001

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 132/430 (30%), Positives = 221/430 (51%), Gaps = 2/430 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD +    +I  L  ++R++ A   L  ++  G  PD  T+  ++ GLC  G+I  A+ L
Sbjct: 78  PDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHL 137

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
            D+M   G +P+V+TY T++  +  + +  +A   + + + KG  P ++TY  LI  +CK
Sbjct: 138 FDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCK 197

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
            C       ++++M      PD+ T N++V+  CK+G   +A  V++ ++ RG+EPN +T
Sbjct: 198 LCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVT 257

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YN L+     R   D   K+ D M        V +YN LING CK   VD+A+  F +M 
Sbjct: 258 YNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMS 317

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +   P+ VTYNT++  LC  G L +A+ L H +      P L+TY TL D L K   ++
Sbjct: 318 RQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLD 377

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KAM L   +  +   PD   + T++ G CRA ++E+A DL   +  +G +     Y ++I
Sbjct: 378 KAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMI 437

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE--WK 567
           HGLCK   +  A ++   M  +   P+D  ++ I +    +       +L ++++   + 
Sbjct: 438 HGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFS 497

Query: 568 VFEKGTTLLA 577
           V    TTLL 
Sbjct: 498 VDVSTTTLLV 507



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 131/472 (27%), Positives = 238/472 (50%), Gaps = 4/472 (0%)

Query: 95  TITKKSHDPSLPS----SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           +I K  H  +L S     D   +  D  T   ++ + C   ++  A   +  + +    P
Sbjct: 54  SIAKTKHHSTLLSLSRQMDSFGIPPDVYTLAIVINSLCHLNRVDFAFSALAKILKLGHQP 113

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D      LIRGL    +I +A  +   M+  G  P+ +TY  ++ GLCK  Q+  A  + 
Sbjct: 114 DATTFTTLIRGLCVEGKIGEALHLFDKMIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIF 173

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
            EM   G  P+++TYN+++  +    ++K       + +     P + T   +++ +CK+
Sbjct: 174 SEMITKGISPNIVTYNSLIHGLCKLCEWKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKE 233

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             +A A +V+D M   G  P++VTYN+L++  C + + D AV V + ++ +    N I+Y
Sbjct: 234 GMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVFDTMVHKDCVANVISY 293

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           NTL++        D    + + M+    +P   TYN LI+GLC  G +  AI+ F++MV+
Sbjct: 294 NTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVA 353

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +   PD+VTY T+   LCK   L++A+ LL  + GS+  P +  Y T++DG+ + G +E 
Sbjct: 354 RGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAIEGSNWDPDIQIYTTILDGMCRAGELED 413

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A  L+  +   G+ P+  T+  +I G C+   + EA  L  E+ K G    +  Y L+  
Sbjct: 414 ARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEMNKNGCSPNDCTYNLITR 473

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           G  ++ +    I++LE M++  +  D +  + +V  ++DDG+ +   ++  K
Sbjct: 474 GFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLDQSVKQILCK 525



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 112/401 (27%), Positives = 212/401 (52%)

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
           +  + +++A      M+     P T+ +N ++  + K     + ++L  +M   G  PDV
Sbjct: 21  LHFNTLDEALSTFNRMLHKQPPPSTVDFNRLLTSIAKTKHHSTLLSLSRQMDSFGIPPDV 80

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            T   ++ ++    +   A       L+ G  P   T+T LI  +C +  I  A+ + D 
Sbjct: 81  YTLAIVINSLCHLNRVDFAFSALAKILKLGHQPDATTFTTLIRGLCVEGKIGEALHLFDK 140

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  EG  P++VTY +L+N  CK  +  +A  + + ++++G+ PN +TYN+L+H L     
Sbjct: 141 MIGEGFQPNVVTYGTLINGLCKDRQVTEAFNIFSEMITKGISPNIVTYNSLIHGLCKLCE 200

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           W  V  +++ M ++   P VFT N +++ LCK G+V  A +  + M+ +  +P++VTYN 
Sbjct: 201 WKHVTTLMNEMVDSKIMPDVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNA 260

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C    ++ A+++   +    C   +I+YNTLI+G  K   ++KAM L+ +M    
Sbjct: 261 LMDGHCLRNEVDVAVKVFDTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQE 320

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           ++P+ +T+ TLI G C   ++++A+ L  E+  RG       YR +   LCK++ +D A+
Sbjct: 321 LTPNTVTYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAM 380

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +L+ +  S + PD  +++TI+  +   G  E+A  L+  L
Sbjct: 381 ALLKAIEGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNL 421



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/376 (30%), Positives = 188/376 (50%), Gaps = 16/376 (4%)

Query: 156 INLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
           ++  + L  I +++  S VL +   M   G  PD  T N+++   C   ++  A ++L +
Sbjct: 582 VDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAK 641

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           +   G +PDV+TY T++     NG  K         + KG  P + TY  LI  +C  C 
Sbjct: 642 LLKLGFQPDVVTYGTLM-----NGLCKM--------ITKGISPDIFTYNSLIHALCNLCE 688

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
                 +L++M      P++V ++++V+  CK+G    A  V++ ++ RG+EP+ +TY  
Sbjct: 689 WKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTA 748

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L+     R   D   K+ D M      P V +YNILING C+   +D+A+    QM  + 
Sbjct: 749 LMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQG 808

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
              D VTYNT++  LC  G L  A+ L H +  S   P L+TY  L+D L K   + +AM
Sbjct: 809 LIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAM 868

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           VL   +  + +  D + +   I G CRA ++E A DL   +  +G +     Y ++IHGL
Sbjct: 869 VLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMIHGL 928

Query: 513 CKSKKVDMAIQVLELM 528
           CK   +D A ++   M
Sbjct: 929 CKRGLLDEANKLFRKM 944



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/344 (30%), Positives = 176/344 (51%), Gaps = 13/344 (3%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD +    LI     + R+  A  VL  ++  G  PD +TY  ++ GLCK          
Sbjct: 614 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK---------- 663

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
              M   G  PD+ TYN+++  + +  ++K       + +     P ++ ++ +++ +CK
Sbjct: 664 ---MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCK 720

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
           +  IA A +V+D M   G  PD+VTY +L++  C + + D+AV V + ++ +G  PN  +
Sbjct: 721 EGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRS 780

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YN L++        D    +L+ M+         TYN LI+GLC  G +  AI  F++MV
Sbjct: 781 YNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           +    PD+VTY  +L  LCK   L EA+ LL  + GS+    ++ YN  IDG+ + G +E
Sbjct: 841 ASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELE 900

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            A  L+  +   G+ PD  T+  +I G C+   ++EA  L +++
Sbjct: 901 AARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKM 944



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 195/390 (50%), Gaps = 13/390 (3%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P T+ +  ++  + K     + ++L  +M   G  PDV T N ++ +     +   A   
Sbjct: 579 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 638

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
               L+ G  P ++TY  L+  +CK             M  +G SPDI TYNSL++  C 
Sbjct: 639 LAKLLKLGFQPDVVTYGTLMNGLCK-------------MITKGISPDIFTYNSLIHALCN 685

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             ++     ++N +++  + PN + ++T++ +L   G       ++D+M +    P V T
Sbjct: 686 LCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVT 745

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y  L++G C    +D A+  F+ MV K C P++ +YN ++   C+   +++A+ LL  ++
Sbjct: 746 YTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMS 805

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                   +TYNTLI GL   G ++ A+ L+ +M+ +G  PD +T+R L+   C+   + 
Sbjct: 806 LQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLA 865

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA+ LLK I           Y + I G+C++ +++ A  +   + S   +PD   ++ ++
Sbjct: 866 EAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVRTYNIMI 925

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             +   G+ +EA KL++K+ E  ++   T+
Sbjct: 926 HGLCKRGLLDEANKLFRKMDENDIWSNSTS 955



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 132/523 (25%), Positives = 231/523 (44%), Gaps = 72/523 (13%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C  G + +A  ++D+M  R   P+      L+ G    + ++ A KV 
Sbjct: 219 DVFTLNTVVDALCKEGMVAEAHDVVDMMIHRGVEPNVVTYNALMDGHCLRNEVDVAVKVF 278

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV    V + I+YN ++ G CK   +  A+ L +EMS     P+ +TYNT++  +   
Sbjct: 279 DTMVHKDCVANVISYNTLINGYCKIQSVDKAMYLFEEMSRQELTPNTVTYNTLIHGLCHV 338

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS--PDIV 293
           G+ + AI  + + + +G  P L+TY  L + +CK   + +A+ +L   AIEG +  PDI 
Sbjct: 339 GRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLK--AIEGSNWDPDIQ 396

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y ++++  C+ G+ +DA  + +NL S+G++PN  TYN ++H L  +G      K+   M
Sbjct: 397 IYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLLAEASKLFSEM 456

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM- 412
           N+   SP   TYN++  G  +     R I    +M+++    D+ T   ++G L  +G+ 
Sbjct: 457 NKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLLVGMLSDDGLD 516

Query: 413 ---------------------------------------------LNEALQLLHLLNGSS 427
                                                        L++AL   + +    
Sbjct: 517 QSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDALSSFNRMLHMH 576

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P  + +  L+  +AK       + L  QM   GI PD  T   LI  FC   ++  A 
Sbjct: 577 PPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAF 636

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCK--SKKVDMAI--------------------QVL 525
            +L ++ K G +     Y  +++GLCK  +K +   I                     +L
Sbjct: 637 SVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNLCEWKHVTTLL 696

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             M++S+  P+  VFST+V  +  +GM   A+ +   +I+  V
Sbjct: 697 NEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGV 739



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 125/514 (24%), Positives = 219/514 (42%), Gaps = 68/514 (13%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G+L DA  L   M  R QIPD      L   L +   ++KA  +L+ +
Sbjct: 327 TYNTLIHGLCHVGRLQDAISLFHEMVARGQIPDLVTYRTLSDYLCKNRHLDKAMALLKAI 386

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             S   PD   Y  ++ G+C+ G++  A  L   +S  G +P+V TYN ++  +   G  
Sbjct: 387 EGSNWDPDIQIYTTILDGMCRAGELEDARDLFSNLSSKGLQPNVWTYNIMIHGLCKQGLL 446

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   + +  + GC P   TY ++     +     R IE+L++M   G S D+ T   L
Sbjct: 447 AEASKLFSEMNKNGCSPNDCTYNLITRGFLRNNEALRTIELLEEMLARGFSVDVSTTTLL 506

Query: 299 VNF--------SCKQ--------------------------------------GKYDDAV 312
           V          S KQ                                         DDA+
Sbjct: 507 VGMLSDDGLDQSVKQILCKPSSSSRPSGTQMRSLPPLFLSSSHNSLHSRSPHFNTLDDAL 566

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
              N +L     P+++ +  LL S+     +  V  +   M+     P V+T NILIN  
Sbjct: 567 SSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSF 626

Query: 373 CKYGLVDRA----------------------INSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           C    +  A                      +N   +M++K   PDI TYN+++ ALC  
Sbjct: 627 CHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCKMITKGISPDIFTYNSLIHALCNL 686

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
                   LL+ +  S   P ++ ++T++D L K+G +  A  +   M++ G+ PD +T+
Sbjct: 687 CEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTY 746

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             L+ G C   +++EAV +   +  +G      +Y ++I+G C+ +++D A+ +LE M  
Sbjct: 747 TALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSL 806

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                D   ++T++  +   G  + A  L+ +++
Sbjct: 807 QGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 840



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 173/359 (48%), Gaps = 13/359 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N ++ +FC   +L  A  ++  + +    PD      L+ GL +        
Sbjct: 612 IPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGFQPDVVTYGTLMNGLCK-------- 663

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                M+  G  PD  TYN ++  LC   + +    LL+EM  S   P+V+ ++T++  +
Sbjct: 664 -----MITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDAL 718

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A       +++G  P ++TYT L++  C +  +  A++V D M  +GC P++
Sbjct: 719 CKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNV 778

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            +YN L+N  C+  + D A+ ++  +  +G+  +++TYNTL+H L   G       +   
Sbjct: 779 RSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHE 838

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M  +   P + TY IL++ LCK   +  A+     +   N   DI+ YN  +  +C+ G 
Sbjct: 839 MVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGE 898

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           L  A  L   L+     P + TYN +I GL K+G +++A  L+ +M EN I  +  + R
Sbjct: 899 LEAARDLFSNLSSKGLQPDVRTYNIMIHGLCKRGLLDEANKLFRKMDENDIWSNSTSSR 957


>gi|449524916|ref|XP_004169467.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g74580-like [Cucumis
           sativus]
          Length = 877

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/443 (31%), Positives = 228/443 (51%), Gaps = 3/443 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQI 177
           T NK++   C +G + ++ KL   + +R   P+ F F I  I+GL R   I++A+++L+ 
Sbjct: 218 TFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNI-FIQGLCRKGAIDEAARLLES 276

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +V  G  PD I+YN ++ G CK  ++  A   L +M  SG EP+  TYNTI+      G 
Sbjct: 277 IVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGM 336

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            + A    +D + KG  P   TY+ LI  +C    + RA+ V  +   +G    I+ YN+
Sbjct: 337 MQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNT 396

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           LV    KQG    A+ ++ +++  G  P+  TYN +++ L   GC    + IL+      
Sbjct: 397 LVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKG 456

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P +FT+N LI+G CK   +D+AI   + M+S    PD++TYNT+L  LCK   L+  +
Sbjct: 457 CIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVV 516

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
                +    C+P +ITYN LI+   K   + +AM L+ +M   G++PD +T  TLI G 
Sbjct: 517 DTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGL 576

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           C   ++++A +L   I K      ++A + ++I+  C    V MA ++   M  S   PD
Sbjct: 577 CSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPD 636

Query: 537 DTVFSTIVKKVADDGMTEEAYKL 559
           +  +  ++      G  + A+  
Sbjct: 637 NYTYRVMIDSYCKTGNIDLAHTF 659



 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 132/421 (31%), Positives = 220/421 (52%), Gaps = 1/421 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  +Q  C +G + +A++L++ +      PD      LI G  +  ++ +A   L  M
Sbjct: 253 TFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKM 312

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V SG  P+  TYN ++ G CK G +++A  +L +    G  PD  TY++++  + ++G  
Sbjct: 313 VNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDM 372

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + + + KG    +I Y  L++ + KQ  + +A++++ DM   GCSPDI TYN +
Sbjct: 373 NRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLV 432

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  CK G   DA  ++N+ +++G  P+  T+NTL+     +   D   +ILD M     
Sbjct: 433 VNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGI 492

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V TYN L+NGLCK   +D  +++F  M+ K C P+I+TYN ++ + CK+  ++EA++
Sbjct: 493 TPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRKVSEAME 552

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGISPDDITHRTLIWGF 477
           L   +     +P ++T  TLI GL   G ++KA  L+  +  E   S        +I  F
Sbjct: 553 LFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVTIEKEYKFSYSTAIFNIMINAF 612

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C    V  A  L  ++G       N  YR++I   CK+  +D+A   L   IS    P  
Sbjct: 613 CXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCKTGNIDLAHTFLLENISKGLVPSF 672

Query: 538 T 538
           T
Sbjct: 673 T 673



 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 138/494 (27%), Positives = 236/494 (47%), Gaps = 35/494 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N I+      G  + A K+   M      PD +     ++      R   A ++L  
Sbjct: 112 QSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVYTHTIRMKSFCITGRPTAALRLLNN 171

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G   + ++Y  ++ G  K      A  L DEM   G  PD++T+N ++  +   G 
Sbjct: 172 MPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGN 231

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            +++   +   +++G  P L T+ I I+ +C++  I  A  +L+ +  EG +PD+++YN+
Sbjct: 232 VQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNT 291

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   CK  K  +A   ++ +++ G+EPN  TYNT+++     G     DKIL       
Sbjct: 292 LICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKG 351

Query: 358 HSPTVFTYNILINGLC-----------------------------------KYGLVDRAI 382
             P  FTY+ LINGLC                                   K GLV +A+
Sbjct: 352 FIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQAL 411

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                M+   C PDI TYN V+  LCK G L++A  +L+      C P + T+NTLIDG 
Sbjct: 412 QLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGY 471

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+  M+KA+ +   M+ +GI+PD IT+ TL+ G C+A +++  VD  K + ++G     
Sbjct: 472 CKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNI 531

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y ++I   CK +KV  A+++ + M +    PD     T++  +  +G  ++AY+L+  
Sbjct: 532 ITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELFVT 591

Query: 563 LIEWKVFEKGTTLL 576
           + +   F   T + 
Sbjct: 592 IEKEYKFSYSTAIF 605



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 227/443 (51%), Gaps = 3/443 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F       +A  L D M ++   PD      LI  L +   ++++ K+   ++  G
Sbjct: 187 VISGFYKENCQIEAYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRG 246

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  T+N+ + GLC++G I  A  LL+ +   G  PDVI+YNT++     + K  +A 
Sbjct: 247 VCPNLFTFNIFIQGLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAE 306

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            +    +  G  P   TY  +I   CK   +  A ++L D   +G  PD  TY+SL+N  
Sbjct: 307 CYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGL 366

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G  + A+ V    + +G + + I YNTL+  L  +G      +++  M E   SP +
Sbjct: 367 CNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDI 426

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TYN+++NGLCK G +  A    N  ++K C PDI T+NT++   CK+  +++A+++L  
Sbjct: 427 WTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDT 486

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P +ITYNTL++GL K   ++  +  +  M+E G +P+ IT+  LI  FC+  +
Sbjct: 487 MLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITYNILIESFCKDRK 546

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK--PDDTVF 540
           V EA++L KE+  RG          +I GLC + ++D A ++  + I   YK      +F
Sbjct: 547 VSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF-VTIEKEYKFSYSTAIF 605

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++           A KL+ K+
Sbjct: 606 NIMINAFCXKLNVSMAEKLFHKM 628



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 134/461 (29%), Positives = 216/461 (46%), Gaps = 39/461 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +E T N I+  FC  G + +A K++     +  IPD     +LI GL     + +A 
Sbjct: 317 VEPNEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAM 376

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V    +  G     I YN +V GL K+G +  A+ L+ +M   GC PD+ TYN ++  +
Sbjct: 377 AVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGL 436

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A G   D + KGC P + T+  LI+  CKQ  + +AIE+LD M   G +PD+
Sbjct: 437 CKMGCLSDANGILNDAIAKGCIPDIFTFNTLIDGYCKQRNMDKAIEILDTMLSHGITPDV 496

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TYN+L+N  CK  K D+ V     +L +G  PN ITY                      
Sbjct: 497 ITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTPNIITY---------------------- 534

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
                        NILI   CK   V  A+  F +M ++   PDIVT  T++  LC  G 
Sbjct: 535 -------------NILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGE 581

Query: 413 LNEALQLLHLLNGS-SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           L++A +L   +      S     +N +I+    K  +  A  L+ +M  +  +PD+ T+R
Sbjct: 582 LDKAYELFVTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYR 641

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            +I  +C+   ++ A   L E   +G     +    V++ LC + ++  A+ ++ LM+ +
Sbjct: 642 VMIDSYCKTGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQN 701

Query: 532 RYKPDD--TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFE 570
              P++  ++F    K+VA   +  E Y L +  I +  +E
Sbjct: 702 GIVPEEVNSIFEADKKEVAAPKIVVE-YLLKKSHITYYSYE 741



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 128/471 (27%), Positives = 213/471 (45%), Gaps = 79/471 (16%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC   KL +A   +  M      P+      +I G  +   ++ A K+L+  + 
Sbjct: 290 NTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTIINGFCKAGMMQNADKILRDAMF 349

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +PD  TY+ ++ GLC  G +  A+A+  E    G +  +I YNT+++ +   G   Q
Sbjct: 350 KGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGFKHSIILYNTLVKGLSKQGLVLQ 409

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   KD +  GC P + TY +++  +CK   ++ A  +L+D   +GC PDI T+N+L++
Sbjct: 410 ALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDANGILNDAIAKGCIPDIFTFNTLID 469

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CKQ   D A+ +++ +LS G+ P+ ITYNTLL+ L      D V      M E   +P
Sbjct: 470 GYCKQRNMDKAIEILDTMLSHGITPDVITYNTLLNGLCKARKLDNVVDTFKAMLEKGCTP 529

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TYNILI   CK   V  A+  F +M ++   PDIVT  T++  LC  G L++A +L 
Sbjct: 530 NIITYNILIESFCKDRKVSEAMELFKEMKTRGLTPDIVTLCTLICGLCSNGELDKAYELF 589

Query: 421 ------------------------------------HLLNGSSCSPCLITYNTLIDGLAK 444
                                               H + GS C+P   TY  +ID   K
Sbjct: 590 VTIEKEYKFSYSTAIFNIMINAFCXKLNVSMAEKLFHKMGGSDCAPDNYTYRVMIDSYCK 649

Query: 445 KG-------------------------------C----MEKAMVLYGQMMENGISPDDIT 469
            G                               C    + +A+V+   M++NGI P+++ 
Sbjct: 650 TGNIDLAHTFLLENISKGLVPSFTTCGKVLNCLCVTHRLSEAVVIINLMVQNGIVPEEVN 709

Query: 470 HRTLIWGFCRADQVEEAV-DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
                     AD+ E A   ++ E   + + +   +Y L+  G+ +++K+D
Sbjct: 710 ------SIFEADKKEVAAPKIVVEYLLKKSHITYYSYELLYDGI-RNRKLD 753



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 183/358 (51%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           ++G+++ A+ + + M    CEP V +YN I+  + + G F QA   +      G  P + 
Sbjct: 88  RKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKDIGIYPDVY 147

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T+TI ++  C       A+ +L++M  +GC  + V+Y ++++   K+    +A  + + +
Sbjct: 148 THTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIEAYHLFDEM 207

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L +G+ P+ +T+N L+H L  +G     +K+   + +    P +FT+NI I GLC+ G +
Sbjct: 208 LKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQGLCRKGAI 267

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A      +VS+   PD+++YNT++   CK   L EA   LH +  S   P   TYNT+
Sbjct: 268 DEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEPNEFTYNTI 327

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I+G  K G M+ A  +    M  G  PD+ T+ +LI G C    +  A+ +  E  ++G 
Sbjct: 328 INGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVFYEAMEKGF 387

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           K     Y  ++ GL K   V  A+Q+++ M+     PD   ++ +V  +   G   +A
Sbjct: 388 KHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKMGCLSDA 445



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 192/389 (49%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           I ++R   R  ++++A  V + M      P   +YN ++  L + G    A  +   M  
Sbjct: 80  IGIMRDYGRKGKVQEAVNVFERMDFYDCEPSVQSYNAIMNILVEYGYFSQAHKVYMRMKD 139

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G  PDV T+   +++    G+   A+    +   +GC    ++Y  +I    K+     
Sbjct: 140 IGIYPDVYTHTIRMKSFCITGRPTAALRLLNNMPGQGCEFNAVSYCAVISGFYKENCQIE 199

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A  + D+M  +G  PDI+T+N L++  CK+G   ++  + + ++ RG+ PN  T+N  + 
Sbjct: 200 AYHLFDEMLKQGICPDILTFNKLIHVLCKKGNVQESEKLFSKVMKRGVCPNLFTFNIFIQ 259

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L  +G  D   ++L+ +     +P V +YN LI G CK+  +  A    ++MV+   +P
Sbjct: 260 GLCRKGAIDEAARLLESIVSEGLTPDVISYNTLICGFCKHSKLVEAECYLHKMVNSGVEP 319

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +  TYNT++   CK GM+  A ++L         P   TY++LI+GL   G M +AM ++
Sbjct: 320 NEFTYNTIINGFCKAGMMQNADKILRDAMFKGFIPDEFTYSSLINGLCNDGDMNRAMAVF 379

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            + ME G     I + TL+ G  +   V +A+ L+K++ + G       Y LV++GLCK 
Sbjct: 380 YEAMEKGFKHSIILYNTLVKGLSKQGLVLQALQLMKDMMEHGCSPDIWTYNLVVNGLCKM 439

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIV 544
             +  A  +L   I+    PD   F+T++
Sbjct: 440 GCLSDANGILNDAIAKGCIPDIFTFNTLI 468


>gi|3152594|gb|AAC17075.1| Contains repeats similar to RECA protein gb|L26100 from
           Acinetobacter calcoaceticus [Arabidopsis thaliana]
          Length = 566

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 259/522 (49%), Gaps = 50/522 (9%)

Query: 85  LAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMA 144
           + ++ K    TIT  S  P L S  G F  +D +++            L+D+   ++ + 
Sbjct: 41  ITLSPKDSAFTITGSSWKPDLDS--GSF-SDDPRSDEP---------NLSDSFSHLESLV 88

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
                P+      L+  L + +R++KA +V+++MV SG +PD   Y  +V  LCKRG + 
Sbjct: 89  TGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVG 148

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
            A+ L+++M   G   + +TYN ++R +   G   Q++ F +  ++KG  P   TY+ L+
Sbjct: 149 YAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLL 208

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           E   K+ G   A+++LD++ ++G  P++V+YN L+   CK+G+ DDA+ +   L ++G +
Sbjct: 209 EAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFK 268

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            N ++YN LL  L   G W+  + +L  M+    +P+V TYNILIN L  +G  ++A+  
Sbjct: 269 ANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQV 328

Query: 385 FNQMVSKNCQPDI--VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN------ 436
             +M   N Q  +   +YN V+  LCKEG ++  ++ L  +    C P   TYN      
Sbjct: 329 LKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLC 388

Query: 437 -----------------------------TLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
                                        ++I  L +KG    A  L  +M   G  PD 
Sbjct: 389 EHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDA 448

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGN-KMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            T+  LI G C       A+++L  + +  N K     +  +I GLCK ++ D+A++V E
Sbjct: 449 HTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFE 508

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +M+  +  P++T ++ +V+ +A +   E A ++  +L   KV
Sbjct: 509 MMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKV 550



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 204/422 (48%), Gaps = 13/422 (3%)

Query: 93  GLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF 152
            + + +K  D   PS        +  T N +++  C  G L  + + ++ + ++   P+ 
Sbjct: 150 AMQLVEKMEDHGYPS--------NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNA 201

Query: 153 HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
                L+    +    ++A K+L  +++ GG P+ ++YN+++ G CK G+   A+AL  E
Sbjct: 202 FTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE 261

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           +   G + +V++YN +LR +  +G++++A     +       P ++TY ILI  +     
Sbjct: 262 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGR 321

Query: 273 IARAIEVLDDMAIEGCSPDIVT---YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
             +A++VL +M+ +G     VT   YN ++   CK+GK D  V  ++ ++ R  +PN  T
Sbjct: 322 TEQALQVLKEMS-KGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGT 380

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YN +               I+  ++      T   Y  +I  LC+ G    A     +M 
Sbjct: 381 YNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMT 440

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS-SCSPCLITYNTLIDGLAKKGCM 448
                PD  TY+ ++  LC EGM   A+++L ++  S +C P +  +N +I GL K    
Sbjct: 441 RCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRT 500

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           + AM ++  M+E    P++ T+  L+ G    D++E A ++L E+  R    +N+  R+V
Sbjct: 501 DLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIV 560

Query: 509 IH 510
           + 
Sbjct: 561 MQ 562


>gi|222612706|gb|EEE50838.1| hypothetical protein OsJ_31258 [Oryza sativa Japonica Group]
          Length = 897

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 235/469 (50%), Gaps = 34/469 (7%)

Query: 129 SRGKLTDASK--LIDIMARRNQIPDFHFCINLI-RGLIRIDRIEKASKVLQIMVMSGGVP 185
           S+G L  A +  L   M  R+++P   F   +  R L R+ R ++A  +L+ M   G VP
Sbjct: 133 SQGGLPRARRFALYRRMVHRDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVP 192

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D + Y  ++  LC +G +  A  LL+EM + GC  DV T++ ++R M   G+ ++A    
Sbjct: 193 DAVLYQTVIHALCDQGGVTEAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLV 252

Query: 246 KDQLRKGCPPYLITYTILIEQVCK-------------------------------QCGIA 274
              + KGC P ++TY  L++ +C+                               +  +A
Sbjct: 253 DRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAMLGRVPELNVVLFNTVIGGCLAEGKLA 312

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A E+ + M ++GC PD  TY+ L++  CK G+   AV ++  +  +G  PN +TY  +L
Sbjct: 313 EATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVL 372

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           HS    G WD    +L+ M+    +     YN +I  LCK G +D A+    +M S+ C 
Sbjct: 373 HSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCN 432

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PDI +YNT++  LC    + EA  +   L         ITYNT+I  L + G  + A+ L
Sbjct: 433 PDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRL 492

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             +M+ +G S D +++  LI   C+   V+ ++ LL+E+ ++G K  N +Y ++I  LCK
Sbjct: 493 AKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCK 552

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            ++V  A+++ + M++    PD   ++T++  +   G    A  L +KL
Sbjct: 553 ERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKL 601



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 121/406 (29%), Positives = 207/406 (50%), Gaps = 31/406 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRI---------- 165
           D  T + +++  C  G++ +A++L+D M  +  +P       L++GL R+          
Sbjct: 228 DVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCRVRQADEARAML 287

Query: 166 ---------------------DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
                                 ++ +A+++ + M + G  PD  TY++++ GLCK G+I 
Sbjct: 288 GRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIG 347

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           SA+ LL EM   G  P+V+TY  +L +   NG +       ++   KG       Y  +I
Sbjct: 348 SAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMI 407

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             +CK   +  A+ ++ +M  +GC+PDI +YN+++   C   + ++A  +  NLL  G+ 
Sbjct: 408 YALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVV 467

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            N ITYNT++H+L   G W    ++   M     S  V +YN LI  +CK G VDR++  
Sbjct: 468 ANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVL 527

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M  K  +P+ V+YN ++  LCKE  + +AL+L   +     +P ++TYNTLI+GL K
Sbjct: 528 LEEMAEKGIKPNNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCK 587

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            G M  A+ L  ++    + PD IT+  LI   C+   +++A  LL
Sbjct: 588 MGWMHAALNLLEKLHNENVHPDIITYNILISWHCKVRLLDDAAMLL 633



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 187/381 (49%), Gaps = 4/381 (1%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P T T+ +    LC+ G+   A+ALL  M+  GC PD + Y T++  + D G   +A   
Sbjct: 157 PTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVTEAATL 216

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
             + L  GC   + T+  ++  +C    +  A  ++D M  +GC P ++TY  L+   C+
Sbjct: 217 LNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLLQGLCR 276

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             + D+A      +L R  E N + +NT++    + G      ++ + M      P   T
Sbjct: 277 VRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQPDAHT 332

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y+IL++GLCK G +  A+    +M  K   P++VTY  VL + CK GM ++   LL  ++
Sbjct: 333 YSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMS 392

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
               +     YN +I  L K G M++AM L  +M   G +PD  ++ T+I+  C  +Q+E
Sbjct: 393 AKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQME 452

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  + + + + G       Y  +IH L +  +   A+++ + MI      D   ++ ++
Sbjct: 453 EAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLI 512

Query: 545 KKVADDGMTEEAYKLWQKLIE 565
           K +  DG  + +  L +++ E
Sbjct: 513 KAMCKDGNVDRSLVLLEEMAE 533



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/339 (30%), Positives = 180/339 (53%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++    + GKL +A++L + M  +   PD H    L+ GL ++ RI  A ++L+ M  
Sbjct: 299 NTVIGGCLAEGKLAEATELYETMGLKGCQPDAHTYSILMHGLCKLGRIGSAVRLLREMEK 358

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +TY +++   CK G      ALL+EMS  G   +   YN ++  +  +G+  +
Sbjct: 359 KGFAPNVVTYTIVLHSFCKNGMWDDTRALLEEMSAKGLTLNSQGYNGMIYALCKDGRMDE 418

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+G  ++   +GC P + +Y  +I  +C    +  A  + +++  EG   + +TYN++++
Sbjct: 419 AMGLIQEMRSQGCNPDICSYNTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIH 478

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              + G++ DAV +   ++  G   + ++YN L+ ++   G  D    +L+ M E    P
Sbjct: 479 ALLRDGRWQDAVRLAKEMILHGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKP 538

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              +YNILI+ LCK   V  A+    QM+++   PDIVTYNT++  LCK G ++ AL LL
Sbjct: 539 NNVSYNILISELCKERRVRDALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLL 598

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
             L+  +  P +ITYN LI    K   ++ A +L  + M
Sbjct: 599 EKLHNENVHPDIITYNILISWHCKVRLLDDAAMLLNRAM 637



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 90/325 (27%), Positives = 162/325 (49%), Gaps = 4/325 (1%)

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R   PP   T+ +    +C+      A+ +L  MA  GC PD V Y ++++  C QG   
Sbjct: 152 RDRVPPTTFTFGVAARALCRLGRADEALALLRGMARHGCVPDAVLYQTVIHALCDQGGVT 211

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A  ++N +L  G   +  T++ ++  +   G      +++D M      P V TY  L+
Sbjct: 212 EAATLLNEMLLMGCAADVNTFDDVVRGMCGLGRVREAARLVDRMMTKGCMPGVMTYGFLL 271

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
            GLC+    D A      M+ +  + ++V +NTV+G    EG L EA +L   +    C 
Sbjct: 272 QGLCRVRQADEA----RAMLGRVPELNVVLFNTVIGGCLAEGKLAEATELYETMGLKGCQ 327

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P   TY+ L+ GL K G +  A+ L  +M + G +P+ +T+  ++  FC+    ++   L
Sbjct: 328 PDAHTYSILMHGLCKLGRIGSAVRLLREMEKKGFAPNVVTYTIVLHSFCKNGMWDDTRAL 387

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L+E+  +G  + +  Y  +I+ LCK  ++D A+ +++ M S    PD   ++TI+  + +
Sbjct: 388 LEEMSAKGLTLNSQGYNGMIYALCKDGRMDEAMGLIQEMRSQGCNPDICSYNTIIYHLCN 447

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTT 574
           +   EEA  +++ L+E  V   G T
Sbjct: 448 NEQMEEAEHMFENLLEEGVVANGIT 472



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 52/200 (26%), Positives = 109/200 (54%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ + C+  ++ +A  + + +     + +      +I  L+R  R + A ++ + M++
Sbjct: 439 NTIIYHLCNNEQMEEAEHMFENLLEEGVVANGITYNTIIHALLRDGRWQDAVRLAKEMIL 498

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D ++YN ++  +CK G +  ++ LL+EM+  G +P+ ++YN ++  +    + + 
Sbjct: 499 HGCSLDVVSYNGLIKAMCKDGNVDRSLVLLEEMAEKGIKPNNVSYNILISELCKERRVRD 558

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   K  L +G  P ++TY  LI  +CK   +  A+ +L+ +  E   PDI+TYN L++
Sbjct: 559 ALELSKQMLNQGLAPDIVTYNTLINGLCKMGWMHAALNLLEKLHNENVHPDIITYNILIS 618

Query: 301 FSCKQGKYDDAVLVINNLLS 320
           + CK    DDA +++N  ++
Sbjct: 619 WHCKVRLLDDAAMLLNRAMA 638


>gi|60390261|sp|Q76C99.1|RF1_ORYSI RecName: Full=Protein Rf1, mitochondrial; AltName: Full=Fertility
           restorer; AltName: Full=Protein PPR; AltName:
           Full=Restorer for CMS; Flags: Precursor
 gi|33859440|dbj|BAC77665.2| PPR protein [Oryza sativa Indica Group]
 gi|33859442|dbj|BAC77666.2| Rf1 [Oryza sativa Indica Group]
 gi|41152689|dbj|BAD08214.1| fertility restorer [Oryza sativa Indica Group]
 gi|46091159|dbj|BAD13708.1| PPR protein [Oryza sativa Indica Group]
 gi|47550657|dbj|BAD20283.1| restorer for CMS [Oryza sativa Indica Group]
          Length = 791

 Score =  231 bits (588), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 145/519 (27%), Positives = 254/519 (48%), Gaps = 42/519 (8%)

Query: 83  HVLAVNKKLRGLTITKKSHDP-----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDAS 137
           +V + N  L+GL    +S +       +    G     D  +   ++  F   G    A 
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
                M  R  +PD     ++I  L +   ++KA +VL  MV +G +PD +TYN ++ G 
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C  GQ + AI  L +M   G EPDV+TY+ ++  +  NG+  +A   +    ++G  P +
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336

Query: 258 ITY-----------------------------------TILIEQVCKQCGIARAIEVLDD 282
            TY                                   +ILI    KQ  + +A+ V   
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSK 396

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  +G +P+ VTY +++   CK G+ +DA+L    ++  G+ P +I YN+L+H L +   
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 343 WDAVDK-ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
           W+  ++ IL++++      T+F +N +I+  CK G V  +   F  MV    +P+++TYN
Sbjct: 457 WERAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           T++   C  G ++EA++LL  +      P  +TY+TLI+G  K   ME A+VL+ +M  +
Sbjct: 516 TLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G+SPD IT+  ++ G  +  +   A +L   I + G ++  S Y +++HGLCK+K  D A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           +Q+ + +     K +   F+ ++  +   G  +EA  L+
Sbjct: 636 LQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 229/449 (51%), Gaps = 12/449 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQ----IPD-FHFCINLIRGLIRIDRIEKASKVLQI 177
           +L+  C+  + +DA   +DI+ RR      IP+ F + I L++GL   +R ++A ++L +
Sbjct: 128 LLKGLCADKRTSDA---MDIVLRRMTELGCIPNVFSYNI-LLKGLCDENRSQEALELLHM 183

Query: 178 MV---MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           M      G  PD ++Y  ++ G  K G    A +   EM   G  PDV+TYN+I+  +  
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
                +A+      ++ G  P  +TY  ++   C       AI  L  M  +G  PD+VT
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ L+++ CK G+  +A  + +++  RG++P   TY TLL    ++G    +  +LD+M 
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P  + ++ILI    K G VD+A+  F++M  +   P+ VTY  V+G LCK G + 
Sbjct: 364 RNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A+     +     SP  I YN+LI GL      E+A  L  +M++ GI  + I   ++I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              C+  +V E+  L + + + G K     Y  +I+G C + K+D A+++L  M+S   K
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           P+   +ST++         E+A  L++++
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEM 572



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 119/411 (28%), Positives = 211/411 (51%), Gaps = 4/411 (0%)

Query: 158 LIRGLIRIDRIEKASK-VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-- 214
           L++GL    R   A   VL+ M   G +P+  +YN+++ GLC   + + A+ LL  M+  
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187

Query: 215 -VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              G  PDV++Y T++   F  G   +A   + + L +G  P ++TY  +I  +CK   +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            +A+EVL+ M   G  PD +TYNS+++  C  G+  +A+  +  + S G+EP+ +TY+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L   G      KI D M +    P + TY  L+ G    G +       + MV    
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD   ++ ++ A  K+G +++A+ +   +     +P  +TY  +I  L K G +E AM+
Sbjct: 368 HPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
            + QM++ G+SP +I + +LI G C  ++ E A +L+ E+  RG  +    +  +I   C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           K  +V  + ++ ELM+    KP+   ++T++      G  +EA KL   ++
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 217/443 (48%), Gaps = 12/443 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + D + RR +    +    L R L  + R   A+ V +   M  +G     PD  T
Sbjct: 33  DARHVFDELLRRGRGASIY---GLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCT 89

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C+ G++    A L  +   G   D I +  +L+ +  + +   A+     ++
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE---GCSPDIVTYNSLVNFSCKQ 305
            + GC P + +Y IL++ +C +     A+E+L  MA +   G  PD+V+Y +++N   K+
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G  D A    + +L RG+ P+ +TYN+++ +L      D   ++L+ M +    P   TY
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N +++G C  G    AI    +M S   +PD+VTY+ ++  LCK G   EA ++   +  
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P + TY TL+ G A KG + +   L   M+ NGI PD      LI  + +  +V++
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQ 389

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+ +  ++ ++G       Y  VI  LCKS +V+ A+   E MI     P + V+++++ 
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449

Query: 546 KVADDGMTEEAYKLWQKLIEWKV 568
            +      E A +L  ++++  +
Sbjct: 450 GLCTCNKWERAEELILEMLDRGI 472



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/451 (24%), Positives = 217/451 (48%), Gaps = 3/451 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +LQ + ++G L +   L+D+M R    PD +    LI    +  ++++A  V   M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKM 397

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ +TY  ++G LCK G++  A+   ++M   G  P  I YN+++  +    K+
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     + L +G     I +  +I+  CK+  +  + ++ + M   G  P+++TYN+L
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C  GK D+A+ +++ ++S G++PN++TY+TL++        +    +   M  +  
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP + TYNI++ GL +      A   + ++     Q ++ TYN +L  LCK  + ++ALQ
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   L          T+N +ID L K G  ++A  L+     NG+ P+  T+R +     
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
               +EE   L   +   G  + +     ++  L +  ++  A   L  MI  ++   + 
Sbjct: 698 GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLS-MIDEKHFSLEA 756

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             +++   +   G  +E Y+   +  ++K F
Sbjct: 757 STASLFIDLLSGGKYQEYYRFLPE--KYKSF 785



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/462 (25%), Positives = 215/462 (46%), Gaps = 3/462 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE D  T + ++   C  G+  +A K+ D M +R   P+      L++G      
Sbjct: 294 SDG--VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  PD   +++++    K+G++  A+ +  +M   G  P+ +TY  
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G+ + A+ +++  + +G  P  I Y  LI  +C      RA E++ +M   G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              + + +NS+++  CK+G+  ++  +   ++  G++PN ITYNTL++     G  D   
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P   TY+ LING CK   ++ A+  F +M S    PDI+TYN +L  L
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +      A +L   +  S     L TYN ++ GL K    + A+ ++  +    +  + 
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  + +EA DL       G       YRL+   +     ++   Q+   
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 711

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           M  +    D  + + IV+++   G    A   +  +I+ K F
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEKHF 752


>gi|307135890|gb|ADN33755.1| pentatricopeptide repeat-containing protein [Cucumis melo subsp.
           melo]
          Length = 566

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 238/477 (49%), Gaps = 37/477 (7%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD----- 186
           +LTDA   ++ M  + Q PD      L+  L +  ++ KA KV+++M+ SG +PD     
Sbjct: 77  RLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDASSYT 136

Query: 187 ------------------------------TITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
                                         T+TYN +V GLC  G +  ++ LLD +   
Sbjct: 137 FLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRLIQK 196

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P+  TY+ +L   +      +A     + + KG  P L++Y +L+  +CK+     A
Sbjct: 197 GLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRTEDA 256

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           I +  ++  +G SP++V+YN L+   C +G++++A +++  +      P+++TYN L+ S
Sbjct: 257 IRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNILIGS 316

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G  +   ++L+ M  A   PT  +YN +I  LCK G +D  +   +QM+ ++C P+
Sbjct: 317 LALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHCNPN 376

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             TYN +   LC+EGM+ EA  ++  L     S     Y  +I  L +KG    A  L  
Sbjct: 377 EGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLLY 435

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M + G +PD  T+ +LI G C    + EA+++   + +  NK     Y  +I G CKS+
Sbjct: 436 EMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFS-VMEENNKPDTENYNSLILGCCKSR 494

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
           + D+A+ V E+M+   Y P++T ++ +V+ +  +   + A K+ ++L    V  + T
Sbjct: 495 RTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLRDVISQST 551



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/392 (28%), Positives = 200/392 (51%), Gaps = 2/392 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C  G LT + +L+D + ++  +P+ +    L+    +    ++ASK+L  +
Sbjct: 169 TYNSLVRGLCMHGNLTQSLQLLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEI 228

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  GG P+ ++YN+++ GLCK G+   AI L  E+   G  P+V++YN +LR++ + G++
Sbjct: 229 IAKGGEPNLVSYNVLLTGLCKEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRW 288

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     +       P  +TY ILI  +        A+EVL++M      P   +YN +
Sbjct: 289 EEANVLLAEMNGDERSPSTVTYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPI 348

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK GK D  V  ++ ++ R   PN  TYN  + +L   G       I+  +    H
Sbjct: 349 IAHLCKDGKLDLVVKCLDQMMYRHCNPNEGTYNA-IATLCEEGMVQEAFSIIQSLGNKQH 407

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S T   Y I+I  LC+ G    A     +M      PD  TY++++  LC EGMLNEA++
Sbjct: 408 SSTQEFYKIVITSLCRKGNTYPAFQLLYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIE 467

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +  ++  ++  P    YN+LI G  K    + A+ ++  M+  G  P++ T+  L+ G  
Sbjct: 468 IFSVMEENN-KPDTENYNSLILGCCKSRRTDLALDVFEIMVGKGYLPNETTYTILVEGII 526

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
              +++ A  +L+E+  R    +++  RLV+ 
Sbjct: 527 HEKEMDLATKVLRELQLRDVISQSTLERLVMQ 558



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/401 (27%), Positives = 190/401 (47%), Gaps = 34/401 (8%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K  ++  A   L+ M   G +PDV     +L  +    K ++AI   +  +  G  P   
Sbjct: 74  KELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGIIPDAS 133

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           +YT L+  +C++  +  A++++D M   G   + VTYNSLV   C  G    ++ +++ L
Sbjct: 134 SYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQLLDRL 193

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           + +G+ PN+ TY+ LL +       D   K+LD +      P + +YN+L+ GLCK G  
Sbjct: 194 IQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLCKEGRT 253

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + AI  F ++ SK   P++V+YN +L +LC EG   EA  LL  +NG   SP  +TYN L
Sbjct: 254 EDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTVTYNIL 313

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR----------ADQ------ 482
           I  LA  G  E A+ +  +M+     P   ++  +I   C+           DQ      
Sbjct: 314 IGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDGKLDLVVKCLDQMMYRHC 373

Query: 483 ------------------VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
                             V+EA  +++ +G + +      Y++VI  LC+      A Q+
Sbjct: 374 NPNEGTYNAIATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQL 433

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           L  M    + PD   +S++++ +  +GM  EA +++  + E
Sbjct: 434 LYEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEE 474



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/288 (28%), Positives = 148/288 (51%)

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           +EQ  K+  +  A   L+ M  +G  PD+     L+   CK  K   A+ V+  ++  G+
Sbjct: 69  VEQKSKELRLTDAFFHLEFMVEKGQKPDVFQATQLLYDLCKACKMRKAIKVMEMMIGSGI 128

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P++ +Y  L+ SL  +G      +++D M E  +     TYN L+ GLC +G + +++ 
Sbjct: 129 IPDASSYTFLVSSLCRKGNVGYAMQLVDKMEEYGYPTNTVTYNSLVRGLCMHGNLTQSLQ 188

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
             ++++ K   P+  TY+ +L A  KE   +EA +LL  +      P L++YN L+ GL 
Sbjct: 189 LLDRLIQKGLVPNAYTYSFLLEAAYKERGADEASKLLDEIIAKGGEPNLVSYNVLLTGLC 248

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K+G  E A+ L+ ++   G SP+ +++  L+   C   + EEA  LL E+          
Sbjct: 249 KEGRTEDAIRLFRELPSKGFSPNVVSYNILLRSLCNEGRWEEANVLLAEMNGDERSPSTV 308

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            Y ++I  L    + + A++VLE MI +R+KP  + ++ I+  +  DG
Sbjct: 309 TYNILIGSLALHGRTEHALEVLEEMIRARFKPTASSYNPIIAHLCKDG 356



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 46/183 (25%), Positives = 85/183 (46%), Gaps = 6/183 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N I    C  G + +A  +I  +  +       F   +I  L R      A ++L
Sbjct: 376 NEGTYNAI-ATLCEEGMVQEAFSIIQSLGNKQHSSTQEFYKIVITSLCRKGNTYPAFQLL 434

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD+ TY+ ++ GLC  G +  AI +   M  +  +PD   YN+++     +
Sbjct: 435 YEMTKYGFTPDSFTYSSLIRGLCMEGMLNEAIEIFSVMEENN-KPDTENYNSLILGCCKS 493

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +   A+  ++  + KG  P   TYTIL+E +  +  +  A +VL ++ +     D+++ 
Sbjct: 494 RRTDLALDVFEIMVGKGYLPNETTYTILVEGIIHEKEMDLATKVLRELQLR----DVISQ 549

Query: 296 NSL 298
           ++L
Sbjct: 550 STL 552


>gi|225456753|ref|XP_002268934.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580 [Vitis vinifera]
 gi|297733985|emb|CBI15232.3| unnamed protein product [Vitis vinifera]
          Length = 764

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 140/445 (31%), Positives = 236/445 (53%), Gaps = 4/445 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F       +A +L + M      PD      LI  L R   ++++ ++L  ++  G
Sbjct: 187 VIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHVQESERLLNKVLKRG 246

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  T N+ + G C+R  +  AI LLD +   G  PDVITYNT++  +  N K  +A 
Sbjct: 247 VSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNTLICGLCKNFKVVEAE 305

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            + +  + +G  P   TY  +I+  CK   +  A ++L D A +G  PD  TY SL+N  
Sbjct: 306 HYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGL 365

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G  D A+ V N  + +G++PN +  NTL+  L  +G      K+++ M+E   SP +
Sbjct: 366 CQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDI 425

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TYN++INGLCK G V  A N     ++K   PD+ T+NT++   CK+  L+ A++++  
Sbjct: 426 WTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDR 485

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     SP +ITYN++++GL K G  E  M  +  MME G  P+ IT+  L   FC+A +
Sbjct: 486 MWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARK 545

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV--F 540
           VEEA++L++E+  +G       +  ++ G C +  +D A Q+ +  +  +YK   T+  +
Sbjct: 546 VEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFK-RVDEQYKFSHTIATY 604

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           + ++   A       A KL+ K+ E
Sbjct: 605 NIMINAFAGKLNMNMAEKLFNKMCE 629



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/436 (29%), Positives = 224/436 (51%), Gaps = 3/436 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C   K+ +A   +  M      PD     ++I G  ++  ++ A ++L
Sbjct: 284 DVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQIL 343

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +     G VPD  TY  ++ GLC+ G I  AI + +E    G +P+++  NT+++ +   
Sbjct: 344 RDGAFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQ 403

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   QA+    +    GC P + TY ++I  +CK   ++ A  ++ D   +G  PD+ T+
Sbjct: 404 GLILQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTF 463

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK+ K D+A+ +++ + + G+ P+ ITYN++L+ L   G ++ V     +M E
Sbjct: 464 NTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMME 523

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYNIL    CK   V+ A+N   +M +K   PD+V + T++   C  G L+ 
Sbjct: 524 KGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDG 583

Query: 416 ALQLLHLLNGS-SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           A QL   ++     S  + TYN +I+  A K  M  A  L+ +M ENG SPD  T+R +I
Sbjct: 584 AYQLFKRVDEQYKFSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSPDSYTYRVMI 643

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            GFC+   +      L    ++G     + +  V++ LC  ++V  A+ ++ LM+     
Sbjct: 644 DGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCLCLKRRVHEAVGIIHLMVHKGIV 703

Query: 535 PD--DTVFSTIVKKVA 548
           P+  +T+F    K+VA
Sbjct: 704 PEVVNTIFEADKKEVA 719



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 132/487 (27%), Positives = 239/487 (49%), Gaps = 36/487 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N I+           A K+   M  +  +PD +     ++   R  R   A ++L  
Sbjct: 112 QSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNN 171

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G     + Y  ++GG  +      A  L +EM   G  PD++ +N ++ T+   G 
Sbjct: 172 MPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGH 231

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            +++       L++G  P L T  I I+  C++  +  AI +LD +   G +PD++TYN+
Sbjct: 232 VQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG-RGLTPDVITYNT 290

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   CK  K  +A   +  +++ G EP+  TYN+++      G     D+IL       
Sbjct: 291 LICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKG 350

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TY  LINGLC+ G +DRAIN FN+ + K  +P++V  NT++  L ++G++ +AL
Sbjct: 351 FVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQAL 410

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGC------------------------------ 447
           +L++ ++ + CSP + TYN +I+GL K GC                              
Sbjct: 411 KLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGY 470

Query: 448 -----MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
                ++ A+ +  +M  +G+SPD IT+ +++ G C+A + E+ +   K + ++G     
Sbjct: 471 CKKLKLDNAIEIVDRMWNHGVSPDVITYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNI 530

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y ++    CK++KV+ A+ ++E M +    PD   F T++K   D+G  + AY+L+++
Sbjct: 531 ITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGFCDNGDLDGAYQLFKR 590

Query: 563 LIEWKVF 569
           + E   F
Sbjct: 591 VDEQYKF 597



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/386 (30%), Positives = 195/386 (50%), Gaps = 3/386 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N I+  +C  G + +A +++   A +  +PD     +LI GL +   I++A  
Sbjct: 317 EPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGFVPDESTYCSLINGLCQDGDIDRAIN 376

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V    +  G  P+ +  N +V GL ++G I  A+ L++EMS +GC PD+ TYN ++  + 
Sbjct: 377 VFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALKLMNEMSENGCSPDIWTYNLVINGLC 436

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G    A     D + KG  P + T+  LI+  CK+  +  AIE++D M   G SPD++
Sbjct: 437 KIGCVSDADNLVIDAIAKGHLPDVFTFNTLIDGYCKKLKLDNAIEIVDRMWNHGVSPDVI 496

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDI 352
           TYNS++N  CK GKY+D +     ++ +G  PN ITYN L  S   +R   +A++ I ++
Sbjct: 497 TYNSILNGLCKAGKYEDVMGTFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEM 556

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEG 411
            N+   +P V  +  L+ G C  G +D A   F ++  +      I TYN ++ A   + 
Sbjct: 557 QNKGL-TPDVVNFGTLMKGFCDNGDLDGAYQLFKRVDEQYKFSHTIATYNIMINAFAGKL 615

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +N A +L + +  +  SP   TY  +IDG  K G +          +E G+ P   T  
Sbjct: 616 NMNMAEKLFNKMCENGFSPDSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFG 675

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRG 497
            ++   C   +V EAV ++  +  +G
Sbjct: 676 RVLNCLCLKRRVHEAVGIIHLMVHKG 701



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 208/441 (47%), Gaps = 40/441 (9%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           ++N+  +GK+ +A  + + M   N  P       ++  L+     ++A KV   M   G 
Sbjct: 83  MRNYGRKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGI 142

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           VPD  T+ + +   C+  +  +A  LL+ M   GCE   + Y T++             G
Sbjct: 143 VPDVYTFTIRMKSFCRTSRPHAARRLLNNMPSQGCESSAVAYCTVIG------------G 190

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
           F+++  R                         A E+ ++M   G  PDI+ +N L++  C
Sbjct: 191 FYEENHR-----------------------VEAHELFEEMLGLGICPDIMAFNKLIHTLC 227

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           ++G   ++  ++N +L RG+ PN  T N  +     R   +   ++LD +     +P V 
Sbjct: 228 RKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVGRGL-TPDVI 286

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN LI GLCK   V  A +   +MV++  +PD  TYN+++   CK GM+  A Q+L   
Sbjct: 287 TYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDG 346

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P   TY +LI+GL + G +++A+ ++ + ME G+ P+ +   TL+ G  +   +
Sbjct: 347 AFKGFVPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLI 406

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            +A+ L+ E+ + G       Y LVI+GLCK   V  A  ++   I+  + PD   F+T+
Sbjct: 407 LQALKLMNEMSENGCSPDIWTYNLVINGLCKIGCVSDADNLVIDAIAKGHLPDVFTFNTL 466

Query: 544 V----KKVADDGMTEEAYKLW 560
           +    KK+  D   E   ++W
Sbjct: 467 IDGYCKKLKLDNAIEIVDRMW 487



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 173/367 (47%), Gaps = 36/367 (9%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           ++G+I+ A+ + + M    CEP V +YN I+  + +   F QA    K  +R        
Sbjct: 88  RKGKIQEAVDVFERMDFFNCEPSVQSYNAIMNILVEYRYFDQA---HKVYMR-------- 136

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
                                   M  +G  PD+ T+   +   C+  +   A  ++NN+
Sbjct: 137 ------------------------MRDKGIVPDVYTFTIRMKSFCRTSRPHAARRLLNNM 172

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
            S+G E +++ Y T++             ++ + M      P +  +N LI+ LC+ G V
Sbjct: 173 PSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMAFNKLIHTLCRKGHV 232

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             +    N+++ +   P++ T N  +   C+  MLNEA++LL  + G   +P +ITYNTL
Sbjct: 233 QESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGV-GRGLTPDVITYNTL 291

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I GL K   + +A     +M+  G  PD  T+ ++I G+C+   ++ A  +L++   +G 
Sbjct: 292 ICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQNADQILRDGAFKGF 351

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
               S Y  +I+GLC+   +D AI V    +    KP+  + +T+VK ++  G+  +A K
Sbjct: 352 VPDESTYCSLINGLCQDGDIDRAINVFNEAMEKGLKPNLVLCNTLVKGLSQQGLILQALK 411

Query: 559 LWQKLIE 565
           L  ++ E
Sbjct: 412 LMNEMSE 418



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 86/302 (28%), Positives = 146/302 (48%), Gaps = 4/302 (1%)

Query: 257 LITYTILIEQVCKQCGIARAIEVLDD--MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           L+TY  +IE++          EVL +  M I+    + V   ++ N+  ++GK  +AV V
Sbjct: 40  LLTYKGMIEKLGFHGEFEAMEEVLAETRMNIDNGLLEGVYIGAMRNYG-RKGKIQEAVDV 98

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
              +     EP+  +YN +++ L     +D   K+   M +    P V+T+ I +   C+
Sbjct: 99  FERMDFFNCEPSVQSYNAIMNILVEYRYFDQAHKVYMRMRDKGIVPDVYTFTIRMKSFCR 158

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
                 A    N M S+ C+   V Y TV+G   +E    EA +L   + G    P ++ 
Sbjct: 159 TSRPHAARRLLNNMPSQGCESSAVAYCTVIGGFYEENHRVEAHELFEEMLGLGICPDIMA 218

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           +N LI  L +KG ++++  L  ++++ G+SP+  T    I GFC+   + EA+ LL  +G
Sbjct: 219 FNKLIHTLCRKGHVQESERLLNKVLKRGVSPNLFTVNIFIQGFCQRAMLNEAIRLLDGVG 278

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
            RG       Y  +I GLCK+ KV  A   L  M++  Y+PD   +++I+      GM +
Sbjct: 279 -RGLTPDVITYNTLICGLCKNFKVVEAEHYLRKMVNEGYEPDGFTYNSIIDGYCKLGMMQ 337

Query: 555 EA 556
            A
Sbjct: 338 NA 339



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 38/227 (16%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N IL   C  GK        D+M                             
Sbjct: 491 VSPDVITYNSILNGLCKAGKYE------DVMG---------------------------- 516

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
              ++M+  G VP+ ITYN++    CK  ++  A+ L++EM   G  PDV+ + T+++  
Sbjct: 517 -TFKLMMEKGCVPNIITYNILTESFCKARKVEEALNLIEEMQNKGLTPDVVNFGTLMKGF 575

Query: 233 FDNGKFKQAIGFWK--DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            DNG    A   +K  D+  K     + TY I+I     +  +  A ++ + M   G SP
Sbjct: 576 CDNGDLDGAYQLFKRVDEQYK-FSHTIATYNIMINAFAGKLNMNMAEKLFNKMCENGFSP 634

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           D  TY  +++  CK G  +     +   + +G+ P+  T+  +L+ L
Sbjct: 635 DSYTYRVMIDGFCKTGNINSGYSFLLVKIEKGLIPSLTTFGRVLNCL 681


>gi|291622148|emb|CBJ23784.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 630

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 242/451 (53%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           ++  T + ++  FC R +L  A  ++  M +    P+     +L+ G     RI +A  +
Sbjct: 114 HNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVAL 173

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           +  M ++G  P+T+T+N ++ GL    +   A+AL+D M   GC+PD++TY  ++  +  
Sbjct: 174 VDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNGLCK 233

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G    A        +    P ++ YT +I+ +CK   +  A+ +  +M  +G  P++VT
Sbjct: 234 RGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPNVVT 293

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+SL++  C  G++ DA  ++++++ R + P+  T++ L+ +    G     +K+ D M 
Sbjct: 294 YSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMV 353

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           + S  P++ TY+ LING C +  +D A   F  MVSK+C PD+V+Y+T++   CK   ++
Sbjct: 354 KRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVD 413

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           E ++L   ++        +TY TLI GL + G  + A  ++ +M+ +G+ P+ +T+ TL+
Sbjct: 414 EGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLL 473

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+  ++E+A+ + + + +   +     Y ++I G+CK+ KV+    +   +     K
Sbjct: 474 DGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVK 533

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   ++T++      G  EEA  L++++ E
Sbjct: 534 PDVVAYNTMISGFCRKGSKEEADALFKEMKE 564



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 236/444 (53%), Gaps = 16/444 (3%)

Query: 133 LTDASKLIDIMARRNQ---------------IPDFHFCIN-LIRGLIRIDRIEKASKVLQ 176
           + + SKL+  +A+ N+               +P  H+  + LI    R  ++  A  VL 
Sbjct: 81  IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGMPHNHYTYSILINCFCRRSQLPLALAVLG 140

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M+  G  P+ +T + ++ G C   +I  A+AL+D+M V+G +P+ +T+NT++  +F + 
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K  +A+      + KGC P L+TY +++  +CK+     A  +L+ M      P ++ Y 
Sbjct: 201 KASEAVALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYT 260

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           ++++  CK    DDA+ +   + ++G+ PN +TY++L+  L + G W    ++L  M E 
Sbjct: 261 TIIDGLCKNKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             +P VFT++ LI+   K G +  A   +++MV ++  P IVTY++++   C    L+EA
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            Q+   +    C P +++Y+TLI G  K   +++ M L+ +M + G+  + +T+ TLI G
Sbjct: 381 KQMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQG 440

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             +A   + A ++ KE+   G       Y  ++ GLCK+ K++ A+ V E +  S+ +P 
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500

Query: 537 DTVFSTIVKKVADDGMTEEAYKLW 560
              ++ +++ +   G  E+ + L+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLF 524



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 227/474 (47%), Gaps = 36/474 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +L  +C   ++++A  L+D M      P+      LI GL   ++  +A  ++  M
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRM 212

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD +TY ++V GLCKRG    A  LL++M     EP V+ Y TI+  +  N   
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHM 272

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+  +K+   KG  P ++TY+ LI  +C     + A  +L DM     +PD+ T+++L
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK  +A  + + ++ R ++P+ +TY++L++        D   ++ + M     
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392

Query: 359 SPTVFTYNILINGLCKY----------------GLV-------------------DRAIN 383
            P V +Y+ LI G CK                 GLV                   D A  
Sbjct: 393 FPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQE 452

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +MVS    P+I+TYNT+L  LCK G L +A+ +   L  S   P + TYN +I+G+ 
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G +E    L+  +   G+ PD + + T+I GFCR    EEA  L KE+ + G    + 
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            Y  +I    +    + + ++++ M S  +  D +    +V  +  DG  ++++
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 226/447 (50%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+ +N  S  KL DA  L   M +    P       L+  + ++++ +    + + M   
Sbjct: 51  KLSRNGLSELKLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNL 110

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   +  TY++++   C+R Q+  A+A+L +M   G EP+++T +++L     + +  +A
Sbjct: 111 GMPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEA 170

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +         G  P  +T+  LI  +      + A+ ++D M  +GC PD+VTY  +VN 
Sbjct: 171 VALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAVALIDRMVAKGCQPDLVTYGVVVNG 230

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK+G  D A +++N +    +EP  + Y T++  L      D    +   M      P 
Sbjct: 231 LCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLFKEMETKGIRPN 290

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TY+ LI+ LC YG    A    + M+ +   PD+ T++ ++ A  KEG L EA +L  
Sbjct: 291 VVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYD 350

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +   S  P ++TY++LI+G      +++A  ++  M+     PD +++ TLI GFC+A 
Sbjct: 351 EMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSYSTLIKGFCKAK 410

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V+E ++L +E+ +RG       Y  +I GL ++   DMA ++ + M+S    P+   ++
Sbjct: 411 RVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYN 470

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKV 568
           T++  +  +G  E+A  +++ L   K+
Sbjct: 471 TLLDGLCKNGKLEKAMVVFEYLQRSKM 497



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 106/378 (28%), Positives = 186/378 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C RG    A  L++ M +    P       +I GL +   ++ A  + 
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFILLNKMEQGKLEPGVLIYTTIIDGLCKNKHMDDALNLF 279

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  P+ +TY+ ++  LC  G+   A  LL +M      PDV T++ ++      
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A   + + +++   P ++TY+ LI   C    +  A ++ + M  + C PD+V+Y
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVSY 399

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L+   CK  + D+ + +   +  RG+  N++TY TL+  L   G  D   +I   M  
Sbjct: 400 STLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGLFQAGDCDMAQEIFKEMVS 459

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN L++GLCK G +++A+  F  +     +P I TYN ++  +CK G + +
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
              L   L+     P ++ YNT+I G  +KG  E+A  L+ +M E+G  P+   + TLI 
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579

Query: 476 GFCRADQVEEAVDLLKEI 493
              R    E + +L+KE+
Sbjct: 580 ARLRDGDREASAELIKEM 597



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 147/305 (48%), Gaps = 1/305 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T + ++  F   GKL +A KL D M +R+  P      +LI G    DR+++A 
Sbjct: 322 INPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAK 381

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + MV     PD ++Y+ ++ G CK  ++   + L  EMS  G   + +TY T+++ +
Sbjct: 382 QMFEFMVSKHCFPDVVSYSTLIKGFCKAKRVDEGMELFREMSQRGLVGNTVTYTTLIQGL 441

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F  G    A   +K+ +  G PP ++TY  L++ +CK   + +A+ V + +      P I
Sbjct: 442 FQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTI 501

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN ++   CK GK +D   +  NL  +G++P+ + YNT++     +G  +  D +   
Sbjct: 502 YTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKE 561

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E    P    YN LI    + G  + +     +M S     D  T   V   L  +G 
Sbjct: 562 MKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGR 620

Query: 413 LNEAL 417
           L+++ 
Sbjct: 621 LDKSF 625


>gi|30699392|ref|NP_178029.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806390|sp|A3KPF8.1|PP131_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g79080, chloroplastic; Flags: Precursor
 gi|126352286|gb|ABO09888.1| At1g79080 [Arabidopsis thaliana]
 gi|332198080|gb|AEE36201.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 576

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 147/522 (28%), Positives = 259/522 (49%), Gaps = 50/522 (9%)

Query: 85  LAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMA 144
           + ++ K    TIT  S  P L S  G F  +D +++            L+D+   ++ + 
Sbjct: 51  ITLSPKDSAFTITGSSWKPDLDS--GSF-SDDPRSDEP---------NLSDSFSHLESLV 98

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
                P+      L+  L + +R++KA +V+++MV SG +PD   Y  +V  LCKRG + 
Sbjct: 99  TGGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRGNVG 158

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
            A+ L+++M   G   + +TYN ++R +   G   Q++ F +  ++KG  P   TY+ L+
Sbjct: 159 YAMQLVEKMEDHGYPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNAFTYSFLL 218

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           E   K+ G   A+++LD++ ++G  P++V+YN L+   CK+G+ DDA+ +   L ++G +
Sbjct: 219 EAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRELPAKGFK 278

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            N ++YN LL  L   G W+  + +L  M+    +P+V TYNILIN L  +G  ++A+  
Sbjct: 279 ANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQALQV 338

Query: 385 FNQMVSKNCQPDI--VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN------ 436
             +M   N Q  +   +YN V+  LCKEG ++  ++ L  +    C P   TYN      
Sbjct: 339 LKEMSKGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYNAIGSLC 398

Query: 437 -----------------------------TLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
                                        ++I  L +KG    A  L  +M   G  PD 
Sbjct: 399 EHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMTRCGFDPDA 458

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGN-KMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            T+  LI G C       A+++L  + +  N K     +  +I GLCK ++ D+A++V E
Sbjct: 459 HTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRTDLAMEVFE 518

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +M+  +  P++T ++ +V+ +A +   E A ++  +L   KV
Sbjct: 519 MMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKV 560



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 107/422 (25%), Positives = 204/422 (48%), Gaps = 13/422 (3%)

Query: 93  GLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF 152
            + + +K  D   PS        +  T N +++  C  G L  + + ++ + ++   P+ 
Sbjct: 160 AMQLVEKMEDHGYPS--------NTVTYNALVRGLCMLGSLNQSLQFVERLMQKGLAPNA 211

Query: 153 HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
                L+    +    ++A K+L  +++ GG P+ ++YN+++ G CK G+   A+AL  E
Sbjct: 212 FTYSFLLEAAYKERGTDEAVKLLDEIIVKGGEPNLVSYNVLLTGFCKEGRTDDAMALFRE 271

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           +   G + +V++YN +LR +  +G++++A     +       P ++TY ILI  +     
Sbjct: 272 LPAKGFKANVVSYNILLRCLCCDGRWEEANSLLAEMDGGDRAPSVVTYNILINSLAFHGR 331

Query: 273 IARAIEVLDDMAIEGCSPDIVT---YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
             +A++VL +M+ +G     VT   YN ++   CK+GK D  V  ++ ++ R  +PN  T
Sbjct: 332 TEQALQVLKEMS-KGNHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGT 390

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YN +               I+  ++      T   Y  +I  LC+ G    A     +M 
Sbjct: 391 YNAIGSLCEHNSKVQEAFYIIQSLSNKQKCCTHDFYKSVITSLCRKGNTFAAFQLLYEMT 450

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS-SCSPCLITYNTLIDGLAKKGCM 448
                PD  TY+ ++  LC EGM   A+++L ++  S +C P +  +N +I GL K    
Sbjct: 451 RCGFDPDAHTYSALIRGLCLEGMFTGAMEVLSIMEESENCKPTVDNFNAMILGLCKIRRT 510

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           + AM ++  M+E    P++ T+  L+ G    D++E A ++L E+  R    +N+  R+V
Sbjct: 511 DLAMEVFEMMVEKKRMPNETTYAILVEGIAHEDELELAKEVLDELRLRKVIGQNAVDRIV 570

Query: 509 IH 510
           + 
Sbjct: 571 MQ 572


>gi|224059754|ref|XP_002299984.1| predicted protein [Populus trichocarpa]
 gi|222847242|gb|EEE84789.1| predicted protein [Populus trichocarpa]
          Length = 610

 Score =  230 bits (587), Expect = 1e-57,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 235/461 (50%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L   +G  +  D  T N ++  +C  G L +A ++++ MA +   P       +I GL +
Sbjct: 141 LSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCK 200

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             R  +A  +L  M+  G  PDT TYN ++   C+R     A  +  EM   G  PD+++
Sbjct: 201 KGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVS 260

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           +++++     N    QA+ +++D  + G  P  + YT+L+   C+   +  A+++ D+M 
Sbjct: 261 FSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEML 320

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +GC  D++ YN+++N  CK+    DA  + + ++ RG  P+  T+ TL+H     G   
Sbjct: 321 EQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMT 380

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +   M + +  P +  YN LI+G CK G +++A   ++ M+S+   P+ +TY  ++
Sbjct: 381 KALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILI 440

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            A C  G ++EA +L  ++      P L+T NT+I G  + G   KA    G+M+  G++
Sbjct: 441 NAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVA 500

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD I++ TLI GF R D +++A   + ++ K G       Y +V++G C+  ++  A  V
Sbjct: 501 PDHISYNTLINGFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELV 560

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           L  MI     PD + ++ ++          EA++   ++++
Sbjct: 561 LRKMIEKGINPDRSTYTALINGHVTQDNLNEAFRFHDEMLQ 601



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 225/442 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +    KL + ++   I+  +  +   + C +L+ GL++ID +E A +V + +V SG
Sbjct: 54  LIRTYVQARKLREGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSG 113

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T N+MV  LCK G+     + L EM  +G   D++TYNT++      G  ++A 
Sbjct: 114 IELNVYTLNIMVNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAF 173

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG  P L TY  +I  +CK+   ARA  +L +M   G SPD  TYN+L+  S
Sbjct: 174 EIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVES 233

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C++  + +A  +   +L +G+ P+ +++++L+         D        M +    P  
Sbjct: 234 CRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDN 293

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y +L++G C+ G +  A+   ++M+ + C  D++ YNT+L  LCKE ML +A +L   
Sbjct: 294 VIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDE 353

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   T+ TLI G  + G M KA+ L+G M +  I PD + + TLI GFC+  +
Sbjct: 354 MVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGE 413

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E+A +L   +  R     +  Y ++I+  C    V  A ++ ++MI    KP     +T
Sbjct: 414 MEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIEKGIKPTLVTCNT 473

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           ++K     G + +A +   ++I
Sbjct: 474 VIKGYCRSGDSSKADEFLGRMI 495



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 115/382 (30%), Positives = 197/382 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C R   ++A ++   M R+  +PD     +LI    R   +++A    
Sbjct: 222 DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYF 281

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G VPD + Y +++ G C+ G +  A+ + DEM   GC  DVI YNTIL  +   
Sbjct: 282 RDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKE 341

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A   + + + +G  P   T+T LI   C+   + +A+ +   M      PDIV Y
Sbjct: 342 KMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAY 401

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK G+ + A  + + ++SR + PN ITY  L+++  S G      ++ D+M E
Sbjct: 402 NTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIE 461

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               PT+ T N +I G C+ G   +A     +M++K   PD ++YNT++    +E  +++
Sbjct: 462 KGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLINGFVREDNMDK 521

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A   ++ +      P +ITYN +++G  ++G M++A ++  +M+E GI+PD  T+  LI 
Sbjct: 522 AFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINPDRSTYTALIN 581

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G    D + EA     E+ +RG
Sbjct: 582 GHVTQDNLNEAFRFHDEMLQRG 603



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 219/457 (47%), Gaps = 18/457 (3%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFH--------FCIN----------LIRGLIRIDRI 168
           F    +L+DA  LI  M RR+ +             C N          LIR  ++  ++
Sbjct: 5   FVRSRRLSDAQALILRMIRRSGVSRVEVVEALVSSMCGNCGTNNLVFDLLIRTYVQARKL 64

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            + ++  +I+   G +      N ++GGL K   +  A  +  E+  SG E +V T N +
Sbjct: 65  REGTEAFRILRSKGYLVSINACNSLLGGLVKIDWVELAWEVHREVVRSGIELNVYTLNIM 124

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +  +GKF     F  +    G    ++TY  LI   C++  +  A E+++ MA +G 
Sbjct: 125 VNALCKDGKFDDVKSFLSEMEGNGIYADMVTYNTLIGAYCREGLLEEAFEIMNSMADKGL 184

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P + TYN+++N  CK+G+Y  A  ++  +L+ G+ P++ TYNTLL     R  +    +
Sbjct: 185 KPSLFTYNAIINGLCKKGRYARAKGILIEMLNIGLSPDTTTYNTLLVESCRRDNFSEAKE 244

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           I   M      P + +++ LI    +   +D+A+  F  M      PD V Y  ++   C
Sbjct: 245 IFGEMLRQGVVPDLVSFSSLIAVFSRNRHLDQALVYFRDMKKFGLVPDNVIYTVLMHGYC 304

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           + G + EAL++   +    C   +I YNT+++GL K+  +  A  L+ +M+E G  PD  
Sbjct: 305 RNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKEKMLTDADKLFDEMVERGALPDFY 364

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T  TLI G C+   + +A+ L   + +R  K    AY  +I G CK  +++ A ++ + M
Sbjct: 365 TFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAYNTLIDGFCKVGEMEKASELWDGM 424

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           IS +  P+   +  ++      G   EA++LW  +IE
Sbjct: 425 ISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIE 461



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 86/278 (30%), Positives = 131/278 (47%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N IL   C    LTDA KL D M  R  +PDF+    LI G  +   + KA  +   M  
Sbjct: 332 NTILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQ 391

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PD + YN ++ G CK G++  A  L D M      P+ ITY  ++      G   +
Sbjct: 392 RNIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSE 451

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   W   + KG  P L+T   +I+  C+    ++A E L  M  +G +PD ++YN+L+N
Sbjct: 452 AFRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 511

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              ++   D A L IN +   G+ P+ ITYN +++    +G     + +L  M E   +P
Sbjct: 512 GFVREDNMDKAFLWINKMEKEGLLPDIITYNVVMNGFCRQGRMQEAELVLRKMIEKGINP 571

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
              TY  LING      ++ A    ++M+ +   PD V
Sbjct: 572 DRSTYTALINGHVTQDNLNEAFRFHDEMLQRGFAPDDV 609


>gi|15221549|ref|NP_176454.1| RNA processing factor 2 [Arabidopsis thaliana]
 gi|193806496|sp|Q9SXD1.2|PPR91_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62670, mitochondrial; Flags: Precursor
 gi|332195871|gb|AEE33992.1| RNA processing factor 2 [Arabidopsis thaliana]
          Length = 630

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 241/453 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + ++  T + ++  FC R +L  A  ++  M +    P+     +L+ G     RI +A 
Sbjct: 112 IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 171

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M ++G  P+T+T+N ++ GL    +   A+AL+D M   GC+PD++TY  ++  +
Sbjct: 172 ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 231

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A        +    P ++ Y  +I+ +CK   +  A+ +  +M  +G  P++
Sbjct: 232 CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 291

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY+SL++  C  G++ DA  ++++++ R + P+  T++ L+ +    G     +K+ D 
Sbjct: 292 VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 351

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M + S  P++ TY+ LING C +  +D A   F  MVSK+C PD+VTYNT++   CK   
Sbjct: 352 MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 411

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + E +++   ++        +TYN LI GL + G  + A  ++ +M+ +G+ P+ +T+ T
Sbjct: 412 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 471

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++E+A+ + + + +   +     Y ++I G+CK+ KV+    +   +    
Sbjct: 472 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 531

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KPD   ++T++      G  EEA  L++++ E
Sbjct: 532 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 236/444 (53%), Gaps = 16/444 (3%)

Query: 133 LTDASKLIDIMARRNQ---------------IPDFHFCIN-LIRGLIRIDRIEKASKVLQ 176
           + + SKL+  +A+ N+               IP  H+  + LI    R  ++  A  VL 
Sbjct: 81  IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 140

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M+  G  P+ +T + ++ G C   +I  A+AL+D+M V+G +P+ +T+NT++  +F + 
Sbjct: 141 KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 200

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K  +A+      + KGC P L+TY +++  +CK+     A  +L+ M      P ++ YN
Sbjct: 201 KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 260

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           ++++  CK    DDA+ +   + ++G+ PN +TY++L+  L + G W    ++L  M E 
Sbjct: 261 TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 320

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             +P VFT++ LI+   K G +  A   +++MV ++  P IVTY++++   C    L+EA
Sbjct: 321 KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 380

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            Q+   +    C P ++TYNTLI G  K   +E+ M ++ +M + G+  + +T+  LI G
Sbjct: 381 KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 440

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             +A   + A ++ KE+   G       Y  ++ GLCK+ K++ A+ V E +  S+ +P 
Sbjct: 441 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 500

Query: 537 DTVFSTIVKKVADDGMTEEAYKLW 560
              ++ +++ +   G  E+ + L+
Sbjct: 501 IYTYNIMIEGMCKAGKVEDGWDLF 524



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 228/474 (48%), Gaps = 36/474 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +L  +C   ++++A  L+D M      P+      LI GL   ++  +A  ++  M
Sbjct: 153 TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 212

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD +TY ++V GLCKRG    A  LL++M     EP V+ YNTI+  +      
Sbjct: 213 VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 272

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+  +K+   KG  P ++TY+ LI  +C     + A  +L DM     +PD+ T+++L
Sbjct: 273 DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 332

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK  +A  + + ++ R ++P+ +TY++L++        D   ++ + M     
Sbjct: 333 IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 392

Query: 359 SPTVFTYNILINGLCKY----------------GLV-------------------DRAIN 383
            P V TYN LI G CKY                GLV                   D A  
Sbjct: 393 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 452

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +MVS    P+I+TYNT+L  LCK G L +A+ +   L  S   P + TYN +I+G+ 
Sbjct: 453 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 512

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G +E    L+  +   G+ PD + + T+I GFCR    EEA  L KE+ + G    + 
Sbjct: 513 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 572

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            Y  +I    +    + + ++++ M S  +  D +    +V  +  DG  ++++
Sbjct: 573 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 625



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 108/378 (28%), Positives = 186/378 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C RG    A  L++ M +    P       +I GL +   ++ A  + 
Sbjct: 220 DLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLF 279

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  P+ +TY+ ++  LC  G+   A  LL +M      PDV T++ ++      
Sbjct: 280 KEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKE 339

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A   + + +++   P ++TY+ LI   C    +  A ++ + M  + C PD+VTY
Sbjct: 340 GKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTY 399

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+   CK  + ++ + V   +  RG+  N++TYN L+  L   G  D   +I   M  
Sbjct: 400 NTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVS 459

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN L++GLCK G +++A+  F  +     +P I TYN ++  +CK G + +
Sbjct: 460 DGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVED 519

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
              L   L+     P ++ YNT+I G  +KG  E+A  L+ +M E+G  P+   + TLI 
Sbjct: 520 GWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIR 579

Query: 476 GFCRADQVEEAVDLLKEI 493
              R    E + +L+KE+
Sbjct: 580 ARLRDGDREASAELIKEM 597



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 175/397 (44%), Gaps = 70/397 (17%)

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++  A+AL  EM  S   P +I ++ +L  +    KF   I   +     G P    TY+
Sbjct: 61  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 120

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           ILI   C++  +  A+ VL  M   G  P+IVT +SL+N  C   +  +AV +++ +   
Sbjct: 121 ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 180

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G +PN++                                   T+N LI+GL  +     A
Sbjct: 181 GYQPNTV-----------------------------------TFNTLIHGLFLHNKASEA 205

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +   ++MV+K CQPD+VTY  V+  LCK G  + A  LL+ +      P ++ YNT+IDG
Sbjct: 206 MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 265

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLI--------W------------------ 475
           L K   M+ A+ L+ +M   GI P+ +T+ +LI        W                  
Sbjct: 266 LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 325

Query: 476 ---------GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
                     F +  ++ EA  L  E+ KR        Y  +I+G C   ++D A Q+ E
Sbjct: 326 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 385

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            M+S    PD   ++T++K        EE  ++++++
Sbjct: 386 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 422



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 1/302 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  F   GKL +A KL D M +R+  P      +LI G    DR+++A ++ 
Sbjct: 325 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 384

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV     PD +TYN ++ G CK  ++   + +  EMS  G   + +TYN +++ +F  
Sbjct: 385 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 444

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A   +K+ +  G PP ++TY  L++ +CK   + +A+ V + +      P I TY
Sbjct: 445 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 504

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N ++   CK GK +D   +  NL  +G++P+ + YNT++     +G  +  D +   M E
Sbjct: 505 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 564

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    YN LI    + G  + +     +M S     D  T   V   L  +G L++
Sbjct: 565 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDK 623

Query: 416 AL 417
           + 
Sbjct: 624 SF 625



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 143/293 (48%)

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ +  +M      P I+ ++ L++   K  K+D  + +   + + G+  N  TY+ L++
Sbjct: 65  AVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILIN 124

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               R        +L  M +  + P + T + L+NG C    +  A+   +QM     QP
Sbjct: 125 CFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQP 184

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           + VT+NT++  L      +EA+ L+  +    C P L+TY  +++GL K+G  + A  L 
Sbjct: 185 NTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLL 244

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M +  + P  + + T+I G C+   +++A++L KE+  +G +     Y  +I  LC  
Sbjct: 245 NKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNY 304

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            +   A ++L  MI  +  PD   FS ++     +G   EA KL+ ++++  +
Sbjct: 305 GRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSI 357


>gi|302757207|ref|XP_002962027.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
 gi|300170686|gb|EFJ37287.1| hypothetical protein SELMODRAFT_77588 [Selaginella moellendorffii]
          Length = 814

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 137/458 (29%), Positives = 237/458 (51%), Gaps = 15/458 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N ++      G   +A K++D M  +  +P       L+  L +   +E+A ++ 
Sbjct: 259 DAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELF 318

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M  SG  P+++ Y  ++ G  K G+++ A +L DEM  +G  PDVIT+  ++  +  +
Sbjct: 319 RVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKS 378

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G F+QA   +++ +R GC P ++TYT +I+ + K   +A A  ++  M   GC PD VTY
Sbjct: 379 GNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTY 438

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L++  CK G+ D+A  +++ L      PN   Y++L+  L   G   +V+  LD + E
Sbjct: 439 ICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGG---SVENTLDDLFE 495

Query: 356 ASHSPTVFTYNI-------LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
            S +      N+       +I GLCK G +D A   F +MVS+ C+PD  TYN ++  LC
Sbjct: 496 QSKAAA---ENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLC 552

Query: 409 K--EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           +  E  +  A  LLH L      P  +TY  L  GL K G +++A+ +  +    G + D
Sbjct: 553 RSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKMLEEASSRGWNAD 612

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            + +  L  G C   QV+ AV L +E+ ++G     +AY  +I+GL K KK++ A +  +
Sbjct: 613 VVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKGKKLEDACKFFD 672

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            MI    KP    ++ +V+ +   G  +EA+  ++ ++
Sbjct: 673 EMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGML 710



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 138/487 (28%), Positives = 229/487 (47%), Gaps = 41/487 (8%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E T   ++ + C  G L  A +L  +MA     P+     +LI G  +  R+++A  +  
Sbjct: 295 EVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSLFD 354

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            MV +G  PD IT+ +M+ GLCK G    A    +EM   GC+P+V+TY TI++ +   G
Sbjct: 355 EMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIG 414

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +   A    K  +  GC P  +TY  L++  CK   +  A ++LD++     SP++  Y+
Sbjct: 415 RVANAFRIMKGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYS 474

Query: 297 SLVN---------------FS---------------------CKQGKYDDAVLVINNLLS 320
           SLV                F                      CK G+ D+A  +   ++S
Sbjct: 475 SLVKGLCDGGSVENTLDDLFEQSKAAAENLDPGLCCSIIVGLCKTGRLDEACRIFQRMVS 534

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE---ASHSPTVFTYNILINGLCKYGL 377
            G +P++ TYN L++ L  R   + V++   ++++     + P   TY  L  GLCK G 
Sbjct: 535 EGCKPDATTYNILINGL-CRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGE 593

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           VDRA+    +  S+    D+V Y  +   LC +G ++ A+ L   +     +P    Y  
Sbjct: 594 VDRAVKMLEEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCC 653

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +I+GL K   +E A   + +M+  G  P   T+  L+   C A  V+EA    + +  RG
Sbjct: 654 IINGLIKGKKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARG 713

Query: 498 NKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
             + +   Y  +IHG CK+ KVD A+++ E MIS    P     +++   +   G TE+A
Sbjct: 714 ELVGSVMIYDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKA 773

Query: 557 YKLWQKL 563
            +L Q++
Sbjct: 774 QELLQEM 780



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 141/487 (28%), Positives = 234/487 (48%), Gaps = 9/487 (1%)

Query: 82  SHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           SHV AV   LR L +T  +      + +    ++D  T N ++    +    +    + +
Sbjct: 87  SHVAAV---LRSLKVTGTAISFFRWAGEQAGFQHDVFTYNCLMNLLVAEKNYSQCYAIHE 143

Query: 142 IMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
            M +    P+ F F I LIR   R  R + A    +IM      PD  T+ ++V  LCK 
Sbjct: 144 EMLKAGIAPNTFSFNI-LIRSFARTRRADDAVTCFEIMKRKRCKPDLHTFLILVDCLCKA 202

Query: 201 GQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
           G    A  +  EM   G   PD   +  ++RT+    + K+A   +    + G PP  I 
Sbjct: 203 GMDEKAFEVFHEMMAMGFVPPDRALHTAMVRTLLKAKRVKEAREVFGQMEKCGFPPDAIA 262

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           Y  +I+ + K      A++VLD+M  + C P  VTY  LVN  CK G  + A  +   + 
Sbjct: 263 YNTMIDGLAKAGHAQEALKVLDNMLAKACVPTEVTYGILVNSLCKAGTLERAEELFRVMA 322

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           + G  PNS+ Y +L+H     G       + D M EA + P V T+ ++I+GLCK G  +
Sbjct: 323 ASGFRPNSVIYTSLIHGFAKSGRMKEACSLFDEMVEAGYRPDVITHTVMIDGLCKSGNFE 382

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +A  SF +M+   C+P++VTY T++  L K G +  A +++  +    C P  +TY  L+
Sbjct: 383 QAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIMKGMIAHGCFPDSVTYICLL 442

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DG  K G +++A  L  ++ +   SP+   + +L+ G C    VE  +D L E  K   +
Sbjct: 443 DGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDGGSVENTLDDLFEQSKAAAE 502

Query: 500 MRNSAYRL-VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV--ADDGMTEEA 556
             +      +I GLCK+ ++D A ++ + M+S   KPD T ++ ++  +  + +   E A
Sbjct: 503 NLDPGLCCSIIVGLCKTGRLDEACRIFQRMVSEGCKPDATTYNILINGLCRSRENRVERA 562

Query: 557 YKLWQKL 563
           + L   L
Sbjct: 563 FALLHDL 569



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 214/453 (47%), Gaps = 8/453 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T+  ++   C  G    A+K  + M R    P+      +I+GL +I R+  A +++
Sbjct: 364 DVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSKIGRVANAFRIM 423

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  PD++TY  ++ G CK G++  A  LLDE+      P++  Y+++++ + D 
Sbjct: 424 KGMIAHGCFPDSVTYICLLDGFCKLGRLDEAAQLLDELDKCSSSPNLQLYSSLVKGLCDG 483

Query: 236 GKFKQAIGFWKDQLRKGCP---PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           G  +  +    +Q +       P L    I+   +CK   +  A  +   M  EGC PD 
Sbjct: 484 GSVENTLDDLFEQSKAAAENLDPGLCCSIIV--GLCKTGRLDEACRIFQRMVSEGCKPDA 541

Query: 293 VTYNSLVNFSCK--QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            TYN L+N  C+  + + + A  ++++L   G  P+++TY  L   L   G  D   K+L
Sbjct: 542 TTYNILINGLCRSRENRVERAFALLHDLEMVGYLPDAVTYTPLCIGLCKIGEVDRAVKML 601

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           +  +    +  V  Y  L  GLC  G VDRA++ F +MV +   PD   Y  ++  L K 
Sbjct: 602 EEASSRGWNADVVAYTALCTGLCYQGQVDRAVSLFQEMVRQGGAPDAAAYCCIINGLIKG 661

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-ISPDDIT 469
             L +A +    + G    P + TY  L+  L   G +++A   +  M+  G +    + 
Sbjct: 662 KKLEDACKFFDEMIGKGQKPTVATYTALVQALCHAGNVDEAFHRFEGMLARGELVGSVMI 721

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  LI GFC+A +V+ A+ L +++  RGN         +  GL +S K + A ++L+ M 
Sbjct: 722 YDALIHGFCKALKVDAALKLFEDMISRGNVPTAVTSASLFDGLVRSGKTEKAQELLQEMA 781

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           +    P    F+ I+  +     + +  KL Q+
Sbjct: 782 AGGSPPHAATFTAILDGLRKSDESGKLLKLVQE 814



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 155/327 (47%), Gaps = 38/327 (11%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG-SRGCWDA 345
           G   D+ TYN L+N    +  Y     +   +L  G+ PN+ ++N L+ S   +R   DA
Sbjct: 114 GFQHDVFTYNCLMNLLVAEKNYSQCYAIHEEMLKAGIAPNTFSFNILIRSFARTRRADDA 173

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS--------------- 390
           V    +IM      P + T+ IL++ LCK G+ ++A   F++M++               
Sbjct: 174 V-TCFEIMKRKRCKPDLHTFLILVDCLCKAGMDEKAFEVFHEMMAMGFVPPDRALHTAMV 232

Query: 391 -------------------KNC--QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
                              + C   PD + YNT++  L K G   EAL++L  +   +C 
Sbjct: 233 RTLLKAKRVKEAREVFGQMEKCGFPPDAIAYNTMIDGLAKAGHAQEALKVLDNMLAKACV 292

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  +TY  L++ L K G +E+A  L+  M  +G  P+ + + +LI GF ++ +++EA  L
Sbjct: 293 PTEVTYGILVNSLCKAGTLERAEELFRVMAASGFRPNSVIYTSLIHGFAKSGRMKEACSL 352

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             E+ + G +     + ++I GLCKS   + A +  E M+    KP+   ++TI++ ++ 
Sbjct: 353 FDEMVEAGYRPDVITHTVMIDGLCKSGNFEQAAKSFEEMMRGGCKPNVVTYTTIIQGLSK 412

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTTLL 576
            G    A+++ + +I    F    T +
Sbjct: 413 IGRVANAFRIMKGMIAHGCFPDSVTYI 439


>gi|242033891|ref|XP_002464340.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
 gi|241918194|gb|EER91338.1| hypothetical protein SORBIDRAFT_01g016560 [Sorghum bicolor]
          Length = 758

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/498 (26%), Positives = 255/498 (51%), Gaps = 2/498 (0%)

Query: 70  VNEVDQDEWSSESHVLAVNKKLRGLTITKKSH--DPSLPSSDGPFVENDEKTNNKILQNF 127
           +N++D D +  ++  +  N  L  L    K    +       G  ++ D  T N +++  
Sbjct: 148 LNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKAL 207

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C   ++  A  +++ M+     PD      L++G I    IE A +V   M+ +G  P  
Sbjct: 208 CRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTG 267

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +T N+++ G CK G++  A+  + +    G EPD +TYNT +  +  NG    A+     
Sbjct: 268 VTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDL 327

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            L++G  P + TY  +I  + K   +  A  +++ M   GC PD  T+N+L+     Q +
Sbjct: 328 MLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNR 387

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            ++A+ +   L  +G+ P+  T+N L+++L   G      ++ + M  +  +P   TYNI
Sbjct: 388 LEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNI 447

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LI+ LC  G +  A++  N+M S  C    VTYNT++ ALCK+  + EA ++   ++   
Sbjct: 448 LIDHLCSMGKLGNALDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQG 507

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            S   +T+NTLIDGL K   ++ A  L  QM++ G+ P++IT+ +++  +C+   +++A 
Sbjct: 508 ISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAA 567

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           D+L+ +   G ++    Y  +I+GLCK+ +  +A+++L  M     +P    ++ +++ +
Sbjct: 568 DILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSL 627

Query: 548 ADDGMTEEAYKLWQKLIE 565
                  +A  L++++ E
Sbjct: 628 FRRNNLRDALNLFREMTE 645



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 140/501 (27%), Positives = 237/501 (47%), Gaps = 38/501 (7%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           SS G  V  DE T   ++Q F   G +  A ++   M      P       LI G  ++ 
Sbjct: 224 SSHG--VAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMG 281

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           R+E A   +Q  +  G  PD +TYN  V GLC+ G +  A+ ++D M   G +PDV TYN
Sbjct: 282 RVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYN 341

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGC--------------------------------- 253
           T++  +  NG+  +A G     + +GC                                 
Sbjct: 342 TVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEALDLARELTVK 401

Query: 254 --PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
              P + T+ ILI  +CK       I + ++M   GC+PD VTYN L++  C  GK  +A
Sbjct: 402 GLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHLCSMGKLGNA 461

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + ++N + S G   +++TYNT++ +L  +   +  +++ D M+    S +  T+N LI+G
Sbjct: 462 LDLLNEMESNGCPRSTVTYNTIIDALCKKMRIEEAEEVFDQMDAQGISRSAVTFNTLIDG 521

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           LCK   +D A     QMV +  QP+ +TYN++L   CK+G + +A  +L  +  +     
Sbjct: 522 LCKAKRIDDATELIEQMVKEGLQPNNITYNSILTHYCKQGNIKKAADILETMTANGFEID 581

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           ++TY TLI+GL K G  + A+ L   M   GI P    +  +I    R + + +A++L +
Sbjct: 582 VVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALNLFR 641

Query: 492 EIGKRGNKMRNSAYRLVIHGLCK-SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           E+ + G       Y++V   LC+    +  A   L  M++  + P+ + F  + + + + 
Sbjct: 642 EMTEVGEPPDALTYKIVFRSLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNL 701

Query: 551 GMTEEAYKLWQKLIEWKVFEK 571
           GM +      + +IE   F +
Sbjct: 702 GMDDYLISAIELIIEKAKFRE 722



 Score =  135 bits (339), Expect = 8e-29,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 169/376 (44%), Gaps = 77/376 (20%)

Query: 265 EQVCKQCGIARAIEVLD----DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-------- 312
           E++ ++ G A A ++++    +M  EG     V   S V    +  ++DDAV        
Sbjct: 93  EEIVQKLGTAGAFDLMEGLVREMRREGHQVRAVVVRSFVESYARLRRFDDAVDLVLNQLD 152

Query: 313 ----------LVINNLLS--------------------RGMEPNSITYNTLLHSLG---- 338
                     +V N+LL+                    RG++P+ +T NTL+ +L     
Sbjct: 153 NDTFGVQADTVVFNHLLNVLVEGSKLKLLESVYNEMTGRGIQPDVVTLNTLIKALCRAHQ 212

Query: 339 -------------------------------SRGCWDAVDKILDIMNEASHSPTVFTYNI 367
                                            G  +A  ++   M EA  SPT  T N+
Sbjct: 213 VRTAVLMLEEMSSHGVAPDETTFTTLMQGFIEEGSIEAALRVKAKMMEAGCSPTGVTVNV 272

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING CK G V+ A+    Q ++   +PD VTYNT +  LC+ G ++ AL+++ L+    
Sbjct: 273 LINGYCKMGRVEDALGYIQQEIADGFEPDQVTYNTFVHGLCQNGHVSHALKVMDLMLQEG 332

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P + TYNT+I+ L+K G +++A  +  QM++ G  PD  T  TLI      +++EEA+
Sbjct: 333 HDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALSSQNRLEEAL 392

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           DL +E+  +G       + ++I+ LCK     + I++ E M SS   PD+  ++ ++  +
Sbjct: 393 DLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCTPDEVTYNILIDHL 452

Query: 548 ADDGMTEEAYKLWQKL 563
              G    A  L  ++
Sbjct: 453 CSMGKLGNALDLLNEM 468



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 147/311 (47%), Gaps = 39/311 (12%)

Query: 304 KQGKYDDAVLVINNLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH---- 358
           +Q   + A+ ++N+ L+R    P+S  Y  ++  LG+ G +D ++ ++  M    H    
Sbjct: 65  EQSDPEAALRMLNSALAREDFAPSSAVYEEIVQKLGTAGAFDLMEGLVREMRREGHQVRA 124

Query: 359 ----------------------------------SPTVFTYNILINGLCKYGLVDRAINS 384
                                                   +N L+N L +   +    + 
Sbjct: 125 VVVRSFVESYARLRRFDDAVDLVLNQLDNDTFGVQADTVVFNHLLNVLVEGSKLKLLESV 184

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           +N+M  +  QPD+VT NT++ ALC+   +  A+ +L  ++    +P   T+ TL+ G  +
Sbjct: 185 YNEMTGRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHGVAPDETTFTTLMQGFIE 244

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           +G +E A+ +  +MME G SP  +T   LI G+C+  +VE+A+  +++    G +     
Sbjct: 245 EGSIEAALRVKAKMMEAGCSPTGVTVNVLINGYCKMGRVEDALGYIQQEIADGFEPDQVT 304

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y   +HGLC++  V  A++V++LM+   + PD   ++T++  ++ +G  +EA  +  +++
Sbjct: 305 YNTFVHGLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMV 364

Query: 565 EWKVFEKGTTL 575
           +       TT 
Sbjct: 365 DRGCLPDTTTF 375


>gi|147840312|emb|CAN63985.1| hypothetical protein VITISV_001389 [Vitis vinifera]
          Length = 850

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 229/452 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +    KL +  +   ++  +      + C +L+ GL+++  ++ A ++ Q +V SG
Sbjct: 294 LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSG 353

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T N+M+  LCK  +I +  + L +M   G  PDV+TYNT++      G  ++A 
Sbjct: 354 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 413

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG  P + TY  +I  +CK     RA  VLD+M   G SPD  TYN L+   
Sbjct: 414 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 473

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+     DA  + + + S+G+ P+ ++++ L+  L   GC D   K    M  A  +P  
Sbjct: 474 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 533

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y ILI G C+ G++  A+   ++M+ + C  D+VTYNT+L  LCKE ML+EA +L   
Sbjct: 534 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTE 593

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   T+ TLI+G  K G M KA+ L+  M++  + PD +T+ TLI GFC+  +
Sbjct: 594 MTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 653

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E+  +L  ++  R     + +Y ++I+G C    V  A ++ + M+   ++      +T
Sbjct: 654 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 713

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           IVK     G   +A +    ++   +   G T
Sbjct: 714 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 745



 Score =  218 bits (554), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 234/457 (51%), Gaps = 14/457 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C +G L +A +L+D M+ +   P       +I GL +  +  +A  VL
Sbjct: 392 DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 451

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PDT TYN+++   C+   +  A  + DEM   G  PD+++++ ++  +  N
Sbjct: 452 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 511

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   QA+ +++D    G  P  + YTILI   C+   ++ A++V D+M  +GC  D+VTY
Sbjct: 512 GCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTY 571

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++N  CK+    +A  +   +  RG+ P+  T+ TL++     G  +    + ++M +
Sbjct: 572 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQ 631

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P V TYN LI+G CK   +++    +N M+S+   P+ ++Y  ++   C  G ++E
Sbjct: 632 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 691

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +        +IT NT++ G  + G   KA      M+  GI PD IT+ TLI 
Sbjct: 692 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 751

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSA-------YRLVIHGLCKSKKVDMAIQVLELM 528
           GF + + ++ A  L+       NKM NS        Y ++++G  +  ++  A  ++  M
Sbjct: 752 GFIKEENMDRAFALV-------NKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 804

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           I     PD + +++++         +EA+++  ++++
Sbjct: 805 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 841



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 201/406 (49%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I  L +  +IE     L  M   G  PD +TYN ++   C++G +  A  L+D MS  G
Sbjct: 364 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 423

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P V TYN I+  +   GK+ +A G   + L+ G  P   TY IL+ + C+   +  A 
Sbjct: 424 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 483

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + D+M  +G  PD+V++++L+    K G  D A+    ++ + G+ P+++ Y  L+   
Sbjct: 484 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 543

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      K+ D M E      V TYN ++NGLCK  ++  A   F +M  +   PD 
Sbjct: 544 CRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 603

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            T+ T++    K+G +N+A+ L  ++   +  P ++TYNTLIDG  K   MEK   L+  
Sbjct: 604 YTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 663

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+   I P+ I++  LI G+C    V EA  L  E+ ++G +        ++ G C++  
Sbjct: 664 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 723

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              A + L  M+     PD   ++T++     +   + A+ L  K+
Sbjct: 724 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 769



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 217/450 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   K+ +    +  M  +   PD      LI    R   +E+A +++  M
Sbjct: 360 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 419

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P   TYN ++ GLCK G+   A  +LDEM   G  PD  TYN +L     N   
Sbjct: 420 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 479

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   + +   +G  P L++++ LI  + K   + +A++   DM   G +PD V Y  L
Sbjct: 480 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 539

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C+ G   +A+ V + +L +G   + +TYNT+L+ L         D++   M E   
Sbjct: 540 IGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 599

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  +T+  LING  K G +++A+  F  M+ +N +PD+VTYNT++   CK   + +  +
Sbjct: 600 FPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 659

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L + +      P  I+Y  LI+G    GC+ +A  L+ +M+E G     IT  T++ G+C
Sbjct: 660 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 719

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           RA    +A + L  +  +G       Y  +I+G  K + +D A  ++  M +S   PD  
Sbjct: 720 RAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 779

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            ++ I+   +  G  +EA  +  K+IE  V
Sbjct: 780 TYNVILNGFSRQGRMQEAELIMLKMIERGV 809



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 201/382 (52%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C    + DA ++ D M  +  +PD      LI  L +   +++A K  
Sbjct: 462 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 521

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +G  PD + Y +++GG C+ G +  A+ + DEM   GC  DV+TYNTIL  +   
Sbjct: 522 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKE 581

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A   + +   +G  P   T+T LI    K   + +A+ + + M      PD+VTY
Sbjct: 582 KMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTY 641

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK  + +    + N+++SR + PN I+Y  L++   + GC     ++ D M E
Sbjct: 642 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 701

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                T+ T N ++ G C+ G   +A    + M+ K   PD +TYNT++    KE  ++ 
Sbjct: 702 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 761

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L++ +  S   P +ITYN +++G +++G M++A ++  +M+E G++PD  T+ +LI 
Sbjct: 762 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 821

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G    + ++EA  +  E+ +RG
Sbjct: 822 GHVTQNNLKEAFRVHDEMLQRG 843



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 215/440 (48%), Gaps = 2/440 (0%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
           +  L   S +I I+ R  ++PD    I  +     + R+E    ++      G  P  + 
Sbjct: 233 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNP--LV 290

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           ++++V    +  ++R        +   G    +   N++L  +   G    A   +++ +
Sbjct: 291 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 350

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R G    + T  I+I  +CK   I      L DM  +G  PD+VTYN+L+N  C+QG  +
Sbjct: 351 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 410

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A  +++++  +G++P   TYN +++ L   G +     +LD M +   SP   TYNIL+
Sbjct: 411 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 470

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
              C+   +  A   F++M S+   PD+V+++ ++G L K G L++AL+    +  +  +
Sbjct: 471 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 530

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  + Y  LI G  + G M +A+ +  +M+E G   D +T+ T++ G C+   + EA +L
Sbjct: 531 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCXLDVVTYNTILNGLCKEKMLSEADEL 590

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             E+ +RG       +  +I+G  K   ++ A+ + E+MI    KPD   ++T++     
Sbjct: 591 FTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 650

Query: 550 DGMTEEAYKLWQKLIEWKVF 569
               E+  +LW  +I  +++
Sbjct: 651 GSEMEKVNELWNDMISRRIY 670



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 134/281 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N IL   C    L++A +L   M  R   PDF+    LI G  +   + KA  + 
Sbjct: 567 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYXKDGNMNKAVTLF 626

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M+     PD +TYN ++ G CK  ++     L ++M      P+ I+Y  ++    + 
Sbjct: 627 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 686

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   W + + KG    +IT   +++  C+     +A E L +M ++G  PD +TY
Sbjct: 687 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 746

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N   K+   D A  ++N + + G+ P+ ITYN +L+    +G     + I+  M E
Sbjct: 747 NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 806

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +P   TY  LING      +  A    ++M+ +   PD
Sbjct: 807 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 847


>gi|297848852|ref|XP_002892307.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
 gi|297338149|gb|EFH68566.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 1164

 Score =  230 bits (586), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 129/425 (30%), Positives = 215/425 (50%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  + + ++  +C  G+L    KLI+ M ++   P+ +   ++I  L RI ++ +A +  
Sbjct: 703  DVISYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAF 762

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              M+  G +PDTI Y  +V G CKRG IR+A     EM      PDV+TY  I+      
Sbjct: 763  SEMIGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQI 822

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            G   +A   + + L +G  P +IT+T L+   CK   I  A  V + M   GCSP++VTY
Sbjct: 823  GDMVEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTY 882

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             +L++  CK+G  D A  +++ +   G++PN  TYN++++ L   G  +   K++     
Sbjct: 883  TTLIDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEA 942

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            A  +    TY  L++  CK G +D+A     +M+ K  QP IVT+N ++   C  GML +
Sbjct: 943  AGLNADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLED 1002

Query: 416  ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
              +LL+ +     +P   T+N L+     +  ++ A  +Y  M   G+ PD  T+  L+ 
Sbjct: 1003 GEKLLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVK 1062

Query: 476  GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            G C A  ++EA  L +E+  +G  +  S Y ++I G  K KK   A ++ + M       
Sbjct: 1063 GHCNARNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAA 1122

Query: 536  DDTVF 540
            D  +F
Sbjct: 1123 DKEIF 1127



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 218/443 (49%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++   C  G++ +A  L+ +M  +   PD      +I G  R   ++K  K+++ M  
Sbjct: 673  NIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYCRFGELDKVWKLIEKMKQ 732

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
             G  P++ TY  ++G LC+  ++  A     EM   G  PD I Y T++      G  + 
Sbjct: 733  KGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTIVYTTLVDGFCKRGDIRA 792

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A  F+ +   +   P ++TYT +I   C+   +  A ++  +M   G  PDI+T+  L+N
Sbjct: 793  ASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEMLCRGLEPDIITFTELMN 852

Query: 301  FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              CK G   DA  V N+++  G  PN +TY TL+  L   G  D+ +++L  M +    P
Sbjct: 853  GYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSANELLHEMWKIGLQP 912

Query: 361  TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             +FTYN ++NGLCK G ++ A+    +  +     D VTY T++ A CK G +++A ++L
Sbjct: 913  NIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAYCKSGEMDKAQEIL 972

Query: 421  HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              + G    P ++T+N L++G    G +E    L   M+  GI+P+  T   L+  +C  
Sbjct: 973  TEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNATTFNCLVKQYCIR 1032

Query: 481  DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            + ++ A  + K++  RG +     Y  ++ G C ++ +  A  + + M    +    + +
Sbjct: 1033 NNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQEMKGKGFSVSVSTY 1092

Query: 541  STIVKKVADDGMTEEAYKLWQKL 563
            S ++K         EA +++ ++
Sbjct: 1093 SVLIKGFFKRKKFVEAREIFDQM 1115



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 220/435 (50%), Gaps = 6/435 (1%)

Query: 135  DASKLIDIMARRNQIPDFHFCINL------IRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
            D +K    +    + P+   C N+      I  + ++ RI +A  +L +M + G  PD I
Sbjct: 646  DCNKTATAIIVFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVI 705

Query: 189  TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
            +Y+ ++ G C+ G++     L+++M   G +P+  TY +I+  +    K  +A   + + 
Sbjct: 706  SYSTVINGYCRFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEM 765

Query: 249  LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
            + +G  P  I YT L++  CK+  I  A +   +M     +PD++TY ++++  C+ G  
Sbjct: 766  IGQGILPDTIVYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDM 825

Query: 309  DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             +A  + + +L RG+EP+ IT+  L++     G      ++ + M +A  SP V TY  L
Sbjct: 826  VEAGKLFHEMLCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTL 885

Query: 369  INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
            I+GLCK G +D A    ++M     QP+I TYN+++  LCK G + EA++L+     +  
Sbjct: 886  IDGLCKEGDLDSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGL 945

Query: 429  SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            +   +TY TL+D   K G M+KA  +  +M+  G+ P  +T   L+ GFC    +E+   
Sbjct: 946  NADTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEK 1005

Query: 489  LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
            LL  +  +G     + +  ++   C    +  A  + + M S   +PD   +  +VK   
Sbjct: 1006 LLNWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHC 1065

Query: 549  DDGMTEEAYKLWQKL 563
            +    +EA+ L+Q++
Sbjct: 1066 NARNMKEAWFLFQEM 1080



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 216/433 (49%), Gaps = 1/433 (0%)

Query: 115  NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC-INLIRGLIRIDRIEKASK 173
            +D +  +   Q     G L +A K+ + M     +     C + L R     ++   A  
Sbjct: 596  SDPRVFDVFFQVLVEFGMLPEARKVFEKMLNYGLVLSVDSCNVYLARLSKDCNKTATAII 655

Query: 174  VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            V +     G   +  +YN+++  +C+ G+I  A  LL  M + G  PDVI+Y+T++    
Sbjct: 656  VFREFPEVGVCWNVASYNIVIHFVCQLGRINEAHHLLLLMELKGYTPDVISYSTVINGYC 715

Query: 234  DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              G+  +     +   +KG  P   TY  +I  +C+ C +A A E   +M  +G  PD +
Sbjct: 716  RFGELDKVWKLIEKMKQKGLKPNSYTYGSIIGLLCRICKLAEAEEAFSEMIGQGILPDTI 775

Query: 294  TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
             Y +LV+  CK+G    A      + SR + P+ +TY  ++      G      K+   M
Sbjct: 776  VYTTLVDGFCKRGDIRAASKFFYEMHSRDITPDVLTYTAIISGFCQIGDMVEAGKLFHEM 835

Query: 354  NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                  P + T+  L+NG CK G +  A    N M+   C P++VTY T++  LCKEG L
Sbjct: 836  LCRGLEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDL 895

Query: 414  NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            + A +LLH +      P + TYN++++GL K G +E+A+ L G+    G++ D +T+ TL
Sbjct: 896  DSANELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTL 955

Query: 474  IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
            +  +C++ ++++A ++L E+  +G +     + ++++G C    ++   ++L  M++   
Sbjct: 956  MDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGI 1015

Query: 534  KPDDTVFSTIVKK 546
             P+ T F+ +VK+
Sbjct: 1016 APNATTFNCLVKQ 1028



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/276 (27%), Positives = 131/276 (47%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            +E D  T  +++  +C  G + DA ++ + M +    P+      LI GL +   ++ A+
Sbjct: 840  LEPDIITFTELMNGYCKAGHIKDAFRVHNHMIQAGCSPNVVTYTTLIDGLCKEGDLDSAN 899

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++L  M   G  P+  TYN +V GLCK G I  A+ L+ E   +G   D +TY T++   
Sbjct: 900  ELLHEMWKIGLQPNIFTYNSIVNGLCKSGNIEEAVKLVGEFEAAGLNADTVTYTTLMDAY 959

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              +G+  +A     + L KG  P ++T+ +L+   C    +    ++L+ M  +G +P+ 
Sbjct: 960  CKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLLNWMLAKGIAPNA 1019

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             T+N LV   C +     A  +  ++ SRG+EP+  TY  L+    +         +   
Sbjct: 1020 TTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNARNMKEAWFLFQE 1079

Query: 353  MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            M     S +V TY++LI G  K      A   F+QM
Sbjct: 1080 MKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQM 1115



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/204 (23%), Positives = 92/204 (45%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T   ++  +C  G++  A +++  M  +   P       L+ G      +E   K+L
Sbjct: 948  DTVTYTTLMDAYCKSGEMDKAQEILTEMLGKGLQPTIVTFNVLMNGFCLHGMLEDGEKLL 1007

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              M+  G  P+  T+N +V   C R  +++A A+  +M   G EPD  TY  +++   + 
Sbjct: 1008 NWMLAKGIAPNATTFNCLVKQYCIRNNLKAATAIYKDMCSRGVEPDGKTYENLVKGHCNA 1067

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               K+A   +++   KG    + TY++LI+   K+     A E+ D M  +G + D   +
Sbjct: 1068 RNMKEAWFLFQEMKGKGFSVSVSTYSVLIKGFFKRKKFVEAREIFDQMRRDGLAADKEIF 1127

Query: 296  NSLVNFSCKQGKYDDAVLVINNLL 319
            +   +   K  + D  V  I+ ++
Sbjct: 1128 DFFSDTKYKGKRPDTIVDPIDEII 1151


>gi|357120446|ref|XP_003561938.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Brachypodium distachyon]
          Length = 787

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 237/463 (51%), Gaps = 1/463 (0%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           +L +  G  +  D  T N +L   C +G L +A  L+  M +    P       L+    
Sbjct: 226 TLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAYA 285

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE-PDV 222
           R+  I++A+KV++ M  +G  PD  TYN++  GLC+ G++  A  L DEM   G   PDV
Sbjct: 286 RLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPDV 345

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           +TYNT+    F       A+   ++   KG    L+T+ I+I+ +CK   +  A+  L+ 
Sbjct: 346 VTYNTLADACFKCRCSSDALRLLEEMREKGVKATLVTHNIVIKGLCKDGELEGALGCLNK 405

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           MA +G +PD++TYN+L++  CK G    A  +++ ++ RG++ ++ T NT+L++L     
Sbjct: 406 MADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRGLKLDTFTLNTVLYNLCKEKR 465

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           ++    +L    +    P   +Y  ++    K    + A+  +++M+ K   P I TYNT
Sbjct: 466 YEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNT 525

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  L + G L EA+  L+ L      P   TYN +I    K+G +E A   + +M+EN 
Sbjct: 526 LIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENS 585

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             PD +T  TL+ G C   ++++A+ L +   ++G K+    Y  +I  +CK   VD A+
Sbjct: 586 FKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTAL 645

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                M +   +PD   ++ ++  +++ G TEEA  +  KL E
Sbjct: 646 HFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHKLAE 688



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 118/417 (28%), Positives = 198/417 (47%), Gaps = 36/417 (8%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+  T+N++V   C +G +  A++ L  M   G  PD +TYNT+L      G   +A   
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
                + G  P   TY  L+    +   I +A +V++ M   G  PD+ TYN L    C+
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321

Query: 305 QGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
            GK D+A  + + +   G + P+ +TYNTL  +     C     ++L+ M E     T+ 
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA----------------- 406
           T+NI+I GLCK G ++ A+   N+M      PD++TYNT++ A                 
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 407 ------------------LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
                             LCKE    EA  LL         P  ++Y T++    K+   
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNS 501

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E A+ L+ +M+E  ++P   T+ TLI G  R  +++EA+D L E+ ++G    ++ Y ++
Sbjct: 502 EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           IH  CK   ++ A Q    M+ + +KPD    +T++  +  +G  ++A KL++  +E
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVE 618



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/390 (27%), Positives = 194/390 (49%), Gaps = 4/390 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+GL +   +E A   L  M   G  PD ITYN ++   CK G I  A  L+DEM   G
Sbjct: 386 VIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEMVRRG 445

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            + D  T NT+L  +    ++++A G  +   ++G  P  ++Y  ++    K+     A+
Sbjct: 446 LKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNSEPAL 505

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + D+M  +  +P I TYN+L+    + G+  +A+  +N L+ +G+ P+  TYN ++H+ 
Sbjct: 506 RLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNIIIHAY 565

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +   +  + M E S  P V T N L+NGLC  G +D+A+  F   V K  + D+
Sbjct: 566 CKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGKKVDV 625

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +TYNT++  +CK+G ++ AL     +      P   TYN ++  L++ G  E+A  +  +
Sbjct: 626 ITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQNMLHK 685

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKS 515
           + E+G      +  + +      D+ E   D   E     N   ++  AY  +++GLC S
Sbjct: 686 LAESGTLSQSFS--SPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLCTS 743

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
            +   A  +L+ M+      D + + T+++
Sbjct: 744 GQFKEAKAILDEMMQKGMSVDSSTYITLME 773



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 101/315 (32%), Positives = 168/315 (53%), Gaps = 1/315 (0%)

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P   T+ +L+   C +  +A A+  L  M   G SPD VTYN+L+N  C++G   +A  +
Sbjct: 202 PNHYTFNLLVHTHCSKGTLADALSTLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARAL 261

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +  +   G+ P   TYNTL+ +    G      K+++ M      P ++TYN+L  GLC+
Sbjct: 262 LARMKKDGVAPTRPTYNTLVSAYARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQ 321

Query: 375 YGLVDRAINSFNQMVS-KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
            G VD A    ++M       PD+VTYNT+  A  K    ++AL+LL  +        L+
Sbjct: 322 AGKVDEAFRLKDEMERLGTLLPDVVTYNTLADACFKCRCSSDALRLLEEMREKGVKATLV 381

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           T+N +I GL K G +E A+    +M ++G++PD IT+ TLI   C+A  + +A  L+ E+
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            +RG K+       V++ LCK K+ + A  +L+      + PD+  + T++     +  +
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNS 501

Query: 554 EEAYKLWQKLIEWKV 568
           E A +LW ++IE K+
Sbjct: 502 EPALRLWDEMIEKKL 516



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/396 (29%), Positives = 180/396 (45%), Gaps = 35/396 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T+N +++  C  G+L  A   ++ MA     PD      LI    +   I KA  ++  M
Sbjct: 382 THNIVIKGLCKDGELEGALGCLNKMADDGLAPDVITYNTLIHAHCKAGNIAKAYTLMDEM 441

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G   DT T N ++  LCK  +   A  LL      G  PD ++Y T++   F     
Sbjct: 442 VRRGLKLDTFTLNTVLYNLCKEKRYEEAQGLLQSPPQRGFMPDEVSYGTVMAAYFKEYNS 501

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A+  W + + K   P + TY  LI+ + +   +  AI+ L+++  +G  PD  TYN +
Sbjct: 502 EPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKLNELMEKGLVPDDTTYNII 561

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G  ++A    N ++    +P+ +T NTL++ L   G  D   K+ +   E   
Sbjct: 562 IHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLNGKLDKALKLFESWVEKGK 621

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              V TYN LI  +CK G VD A++ F  M ++  QPD  TYN VL AL + G   EA  
Sbjct: 622 KVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTYNVVLSALSEAGRTEEAQN 681

Query: 419 LLH------LLNGSSCSPCLI-----------------------------TYNTLIDGLA 443
           +LH       L+ S  SP L                               Y  L++GL 
Sbjct: 682 MLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVENPQDSASEAYTKLVNGLC 741

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
             G  ++A  +  +MM+ G+S D  T+ TL+ G  +
Sbjct: 742 TSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/294 (27%), Positives = 134/294 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE +   ++  +        A +L D M  +   P       LI+GL R+ R+++A   L
Sbjct: 484 DEVSYGTVMAAYFKEYNSEPALRLWDEMIEKKLTPSISTYNTLIKGLSRMGRLKEAIDKL 543

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             ++  G VPD  TYN+++   CK G + +A    ++M  +  +PDV+T NT++  +  N
Sbjct: 544 NELMEKGLVPDDTTYNIIIHAYCKEGDLENAFQFHNKMVENSFKPDVVTCNTLMNGLCLN 603

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A+  ++  + KG    +ITY  LI+ +CK   +  A+    DM   G  PD  TY
Sbjct: 604 GKLDKALKLFESWVEKGKKVDVITYNTLIQTMCKDGDVDTALHFFADMEARGLQPDAFTY 663

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N +++   + G+ ++A  +++ L   G    S +   L  S           K  +   E
Sbjct: 664 NVVLSALSEAGRTEEAQNMLHKLAESGTLSQSFSSPLLKPSSVDEAESGKDAKTEEETVE 723

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
                    Y  L+NGLC  G    A    ++M+ K    D  TY T++  L K
Sbjct: 724 NPQDSASEAYTKLVNGLCTSGQFKEAKAILDEMMQKGMSVDSSTYITLMEGLVK 777



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 108/212 (50%), Gaps = 3/212 (1%)

Query: 360 PTVFTYNILINGLCKYGLVD--RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
           P++   N +++ L +        ++++F  +V+    P+  T+N ++   C +G L +AL
Sbjct: 165 PSLQAANAVLSALARSPSTSPQASLDAFRSIVALRLHPNHYTFNLLVHTHCSKGTLADAL 224

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
             L  + G   SP  +TYNTL++   +KG + +A  L  +M ++G++P   T+ TL+  +
Sbjct: 225 STLSTMQGFGLSPDAVTYNTLLNAHCRKGMLGEARALLARMKKDGVAPTRPTYNTLVSAY 284

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS-SRYKPD 536
            R   +++A  +++ +   G +     Y ++  GLC++ KVD A ++ + M       PD
Sbjct: 285 ARLGWIKQATKVVEAMTANGFEPDLWTYNVLAAGLCQAGKVDEAFRLKDEMERLGTLLPD 344

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              ++T+         + +A +L +++ E  V
Sbjct: 345 VVTYNTLADACFKCRCSSDALRLLEEMREKGV 376


>gi|356529689|ref|XP_003533421.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Glycine max]
          Length = 892

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/445 (30%), Positives = 229/445 (51%), Gaps = 4/445 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L ++C  G +  A      + R    PD     +L+ G  R D +E+A  V  +M
Sbjct: 191 TLNTMLNSYCKLGNMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVM 250

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                V    +Y  ++ GLC+ G++  A+     M   GC P V TY  ++  + ++G+ 
Sbjct: 251 PRRNAV----SYTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRE 306

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + +   +GC P + TYT+LI+ +CK+  +  A+++L++M  +G +P +V +N+L
Sbjct: 307 LEALSLFGEMRERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNAL 366

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK+G  +DAV V+  + S+ + PN  TYN L+         D    +L+ M E+  
Sbjct: 367 IGSYCKRGMMEDAVGVLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKL 426

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP V TYN LI+GLC+ G+VD A   F  M+     PD  T+N  +  LC+ G + EA Q
Sbjct: 427 SPDVVTYNTLIHGLCEVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQ 486

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  L           Y  LIDG  K G +E A  L+ +M+     P+ IT   +I G  
Sbjct: 487 ILESLKEKHVKANEHAYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLR 546

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +V++A+ L++++ K   K     Y +++  + K    D A ++L  +ISS Y+P+  
Sbjct: 547 KEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVV 606

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++  +K     G  EEA ++  K+
Sbjct: 607 TYTAFIKAYCSQGRLEEAEEMVIKI 631



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 224/476 (47%), Gaps = 39/476 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  +C    +  A  +  +M RRN +       NLI GL    ++ +A +  
Sbjct: 223 DLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVSY----TNLIHGLCEAGKLHEALEFW 278

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P   TY ++V  LC+ G+   A++L  EM   GCEP+V TY  ++  +   
Sbjct: 279 ARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTVLIDYLCKE 338

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A+    + + KG  P ++ +  LI   CK+  +  A+ VL  M  +   P++ TY
Sbjct: 339 GRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKKVCPNVRTY 398

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+   C+    D A+ ++N ++   + P+ +TYNTL+H L   G  D+  ++  +M  
Sbjct: 399 NELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFRLMIR 458

Query: 356 ASHSPTVFTYN-----------------------------------ILINGLCKYGLVDR 380
              SP  +T+N                                    LI+G CK G ++ 
Sbjct: 459 DGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEH 518

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A + F +M+++ C P+ +T+N ++  L KEG + +A+ L+  +      P L TYN L++
Sbjct: 519 AASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVE 578

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
            + K+   ++A  +  +++ +G  P+ +T+   I  +C   ++EEA +++ +I   G  +
Sbjct: 579 EVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLL 638

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
            +  Y L+I+       +D A  VL  M  +  +P    +S ++K +  +   +E 
Sbjct: 639 DSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEG 694



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/416 (29%), Positives = 211/416 (50%), Gaps = 11/416 (2%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGG---VPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           L+  L R   +++   + + M+   G    P+ IT N M+   CK G +  A+A L  + 
Sbjct: 157 LLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSYCKLGNM--AVARLFFVR 214

Query: 215 VSGCEP--DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           +  CEP  D+ TY +++     N   ++A G +    R+      ++YT LI  +C+   
Sbjct: 215 ILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNA----VSYTNLIHGLCEAGK 270

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           +  A+E    M  +GC P + TY  LV   C+ G+  +A+ +   +  RG EPN  TY  
Sbjct: 271 LHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMRERGCEPNVYTYTV 330

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L+  L   G  D   K+L+ M E   +P+V  +N LI   CK G+++ A+     M SK 
Sbjct: 331 LIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVGVLGLMESKK 390

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             P++ TYN ++   C+   ++ A+ LL+ +  S  SP ++TYNTLI GL + G ++ A 
Sbjct: 391 VCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSAS 450

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L+  M+ +G SPD  T    +   CR  +V EA  +L+ + ++  K    AY  +I G 
Sbjct: 451 RLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGY 510

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           CK+ K++ A  + + M++    P+   F+ ++  +  +G  ++A  L + + ++ V
Sbjct: 511 CKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDV 566



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 224/473 (47%), Gaps = 33/473 (6%)

Query: 118 KTNNKILQNFCSRGKLTD-ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           +T N+++  FC RGK  D A  L++ M      PD      LI GL  +  ++ AS++ +
Sbjct: 396 RTYNELICGFC-RGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLCEVGVVDSASRLFR 454

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
           +M+  G  PD  T+N  +  LC+ G++  A  +L+ +     + +   Y  ++      G
Sbjct: 455 LMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAG 514

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K + A   +K  L + C P  IT+ ++I+ + K+  +  A+ +++DMA     P + TYN
Sbjct: 515 KIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYN 574

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNE 355
            LV    K+  +D A  ++N L+S G +PN +TY   + +  S+G   +A + ++ I NE
Sbjct: 575 ILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNE 634

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC-----KE 410
                + F YN+LIN     GL+D A     +M    C+P  +TY+ ++  L      KE
Sbjct: 635 GVLLDS-FIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKE 693

Query: 411 GM----LNEALQ--------------------LLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           G     L+ +L                     L   +    C P L TY+ LI+GL K G
Sbjct: 694 GSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVG 753

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +  A  LY  M E GISP +I H +L+   C+     EAV LL  + +  +     +Y+
Sbjct: 754 RLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYK 813

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           L+I GL +    + A  V   ++   Y  D+  +  ++  +A  G  ++  +L
Sbjct: 814 LLICGLFEQMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSEL 866



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 123/488 (25%), Positives = 228/488 (46%), Gaps = 37/488 (7%)

Query: 58  CRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGL----TITKKSHDPSLPSSDGPFV 113
           CRG   +  +  +N++ + + S +  V+  N  + GL     +   S    L   DG   
Sbjct: 406 CRGKSMDRAMALLNKMVESKLSPD--VVTYNTLIHGLCEVGVVDSASRLFRLMIRDG--F 461

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
             D+ T N  +   C  G++ +A ++++ +  ++   + H    LI G  +  +IE A+ 
Sbjct: 462 SPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEHAYTALIDGYCKAGKIEHAAS 521

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + M+    +P++IT+N+M+ GL K G+++ A+ L+++M+    +P + TYN ++  + 
Sbjct: 522 LFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDMAKFDVKPTLHTYNILVEEVL 581

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
               F +A       +  G  P ++TYT  I+  C Q  +  A E++  +  EG   D  
Sbjct: 582 KEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRLEEAEEMVIKIKNEGVLLDSF 641

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH------------------ 335
            YN L+N     G  D A  V+  +   G EP+ +TY+ L+                   
Sbjct: 642 IYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSILMKHLVIEKHKKEGSNPVGLD 701

Query: 336 ------SLGSRGCWDAVD-----KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
                 S+ +   W  +D      + + M E    P + TY+ LINGLCK G ++ A + 
Sbjct: 702 VSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNTYSKLINGLCKVGRLNVAFSL 761

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           ++ M      P  + +N++L + CK GM  EA+ LL  +   S    L +Y  LI GL +
Sbjct: 762 YHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMMECSHLAHLESYKLLICGLFE 821

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           +   EKA  ++  ++  G + D++  + LI G  +   V++  +LL  + K G ++    
Sbjct: 822 QMNKEKAEAVFCSLLRCGYNYDEVAWKVLIDGLAKTGYVDQCSELLNLMEKNGCRLHPET 881

Query: 505 YRLVIHGL 512
           Y +++  L
Sbjct: 882 YSMLMQEL 889



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/481 (23%), Positives = 213/481 (44%), Gaps = 29/481 (6%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T   ++   C  G++ +A K+++ M  +   P       LI    +   +E A  
Sbjct: 322 EPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMMEDAVG 381

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL +M      P+  TYN ++ G C+   +  A+ALL++M  S   PDV+TYNT++  + 
Sbjct: 382 VLGLMESKKVCPNVRTYNELICGFCRGKSMDRAMALLNKMVESKLSPDVVTYNTLIHGLC 441

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           + G    A   ++  +R G  P   T+   +  +C+   +  A ++L+ +  +    +  
Sbjct: 442 EVGVVDSASRLFRLMIRDGFSPDQWTFNAFMVCLCRMGRVGEAHQILESLKEKHVKANEH 501

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y +L++  CK GK + A  +   +L+    PNSIT+N ++  L   G       +++ M
Sbjct: 502 AYTALIDGYCKAGKIEHAASLFKRMLAEECLPNSITFNVMIDGLRKEGKVQDAMLLVEDM 561

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    PT+ TYNIL+  + K    DRA    N+++S   QP++VTY   + A C +G L
Sbjct: 562 AKFDVKPTLHTYNILVEEVLKEYDFDRANEILNRLISSGYQPNVVTYTAFIKAYCSQGRL 621

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA +++  +           YN LI+     G ++ A  +  +M   G  P  +T+  L
Sbjct: 622 EEAEEMVIKIKNEGVLLDSFIYNLLINAYGCMGLLDSAFGVLRRMFGTGCEPSYLTYSIL 681

Query: 474 IWGFCRADQVEE--------------AVD---------------LLKEIGKRGNKMRNSA 504
           +         +E              +VD               L +++ + G     + 
Sbjct: 682 MKHLVIEKHKKEGSNPVGLDVSLTNISVDNTDIWSKIDFGITTVLFEKMAECGCVPNLNT 741

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I+GLCK  ++++A  +   M      P + + ++++      GM  EA  L   ++
Sbjct: 742 YSKLINGLCKVGRLNVAFSLYHHMREGGISPSEIIHNSLLSSCCKLGMFGEAVTLLDSMM 801

Query: 565 E 565
           E
Sbjct: 802 E 802



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 70/302 (23%), Positives = 134/302 (44%), Gaps = 43/302 (14%)

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            + T++SL+    +      A  V N+++     P+  T+   L +L  R   +      
Sbjct: 85  SLATHHSLLLLLVRHRTLRAAENVRNSMIKSCTSPHDATF---LLNLLRR--MNTAAAAA 139

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ---PDIVTYNTVLGAL 407
           D  ++ +   ++ +YN L+  L ++ +VD  I+ + +M++ N     P+++T NT+L + 
Sbjct: 140 DHQHQLAFKLSLTSYNRLLMCLSRFSMVDEMISLYKEMLTDNGNSVFPNLITLNTMLNSY 199

Query: 408 CKEGMLNEALQLLHLLNGSSCSP---------------------------CL------IT 434
           CK G  N A+  L  +    C P                           C+      ++
Sbjct: 200 CKLG--NMAVARLFFVRILRCEPGPDLFTYTSLVLGYCRNDDVERACGVFCVMPRRNAVS 257

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y  LI GL + G + +A+  + +M E+G  P   T+  L+   C + +  EA+ L  E+ 
Sbjct: 258 YTNLIHGLCEAGKLHEALEFWARMREDGCFPTVRTYTVLVCALCESGRELEALSLFGEMR 317

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           +RG +     Y ++I  LCK  ++D A+++L  M+     P    F+ ++      GM E
Sbjct: 318 ERGCEPNVYTYTVLIDYLCKEGRMDEALKMLNEMVEKGVAPSVVPFNALIGSYCKRGMME 377

Query: 555 EA 556
           +A
Sbjct: 378 DA 379


>gi|449451888|ref|XP_004143692.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
 gi|449529106|ref|XP_004171542.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like [Cucumis sativus]
          Length = 783

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 138/450 (30%), Positives = 228/450 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N IL     R  L +A  L+  M  +   P+ H    L+ G  R+  +++A+KV+
Sbjct: 247 DTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNMLVCGYCRLGLLKEATKVI 306

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +IM  +  +P   TYNM+V G C  G+I  A  + DEM      PDV+TYNT++      
Sbjct: 307 EIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQW 366

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +     ++  +KG     +TY I+++ +CK+  +  A   LD M   G SPD VTY
Sbjct: 367 RDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTY 426

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+   CK GK   A  +++ + S+G++ ++ T NT+LH L      D    +L   ++
Sbjct: 427 NTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASK 486

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             +     +Y ILI G  K    DRA+N +++M  +   P  +TYN+V+G LC+   +++
Sbjct: 487 RGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQ 546

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+  L+ +  +   P   TYN +I G   +G +EKA   + +M+EN   PD  T   L+ 
Sbjct: 547 AIDKLNEMLENGLVPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLR 606

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G CR   +E+A+ L   +  +G  +    Y  +I  LCK  K + A  +L  M + +  P
Sbjct: 607 GLCREGMLEKALKLFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGP 666

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   +  I+  + D G  +EA +   K++E
Sbjct: 667 DQYTYKVIIAALTDAGRIKEAEEFTLKMVE 696



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 130/467 (27%), Positives = 229/467 (49%), Gaps = 38/467 (8%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRI---DRIEKASKVLQIMVMSGGVPDTITYNM 192
           A+++ + M R N  P+   C  L+  L+R      I  A +VL+  +  G VP+T ++N+
Sbjct: 159 ATQIFNKMKRLNYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNI 218

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++ G C   +++ A+  +++MS  GC PD ++YNTIL  +      ++A     D   KG
Sbjct: 219 LIYGYCLESKVKDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKG 278

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P   TY +L+   C+   +  A +V++ M      P + TYN LVN  C  GK D+A 
Sbjct: 279 LSPNKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAF 338

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            + + +    + P+ +TYNTL+           V  +++ M++        TYNI++  +
Sbjct: 339 RIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWM 398

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG------- 425
           CK G +  A  + ++M      PD VTYNT++GA CK G + +A +++  +         
Sbjct: 399 CKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDT 458

Query: 426 ---SSCSPCL-------------------------ITYNTLIDGLAKKGCMEKAMVLYGQ 457
              ++   CL                         ++Y  LI G  K    ++A+ L+ +
Sbjct: 459 WTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDE 518

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M E  I P  IT+ ++I G C++ +V++A+D L E+ + G     + Y ++IHG C    
Sbjct: 519 MKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGLVPDETTYNIIIHGFCLEGN 578

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           V+ A Q    MI + +KPD    + +++ +  +GM E+A KL+  L+
Sbjct: 579 VEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLV 625



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 206/457 (45%), Gaps = 58/457 (12%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR----------IDRI 168
           T N ++  FC+ GK+ +A ++ D M + N +PD      LI G  +          I+ +
Sbjct: 320 TYNMLVNGFCNDGKIDEAFRIRDEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEM 379

Query: 169 EK-------------------------ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
           +K                         A+  L  M  +G  PD +TYN ++G  CK G++
Sbjct: 380 DKKGVKCNAVTYNIILKWMCKKGNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKM 439

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A  ++DEM+  G + D  T NTIL  +    K  +A        ++G     ++Y IL
Sbjct: 440 GKAFRMMDEMTSKGLKIDTWTLNTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGIL 499

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I    K     RA+ + D+M      P  +TYNS++   C+  K D A+  +N +L  G+
Sbjct: 500 ILGYFKDEKGDRALNLWDEMKERQIMPSTITYNSVIGGLCQSRKVDQAIDKLNEMLENGL 559

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+  TYN ++H     G  +   +  + M E    P V+T NIL+ GLC+ G++++A+ 
Sbjct: 560 VPDETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALK 619

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            FN +VSK    D+VTYNT++ +LCKEG    A  LL  +      P   TY  +I  L 
Sbjct: 620 LFNTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALT 679

Query: 444 KKGCMEKAMVLYGQMMENGISPD-----------------------DITHRTLIWGFCRA 480
             G +++A     +M+E+GI  D                        I +   I   C  
Sbjct: 680 DAGRIKEAEEFTLKMVESGIVHDQNLKLGKGQNVLTSEVSEHFDFKSIAYSDQINELCNQ 739

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
            + ++A+ L  E+ K G  +    Y  ++ GL K +K
Sbjct: 740 HKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKRRK 776



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/418 (28%), Positives = 203/418 (48%), Gaps = 37/418 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T N ++  +C  G L +A+K+I+IM R N +P       L+ G     +I++A ++ 
Sbjct: 282 NKHTYNMLVCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIR 341

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M     +PD +TYN ++ G  +        +L++EM   G + + +TYN IL+ M   
Sbjct: 342 DEMEKMNVLPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKK 401

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A          G  P  +TY  LI   CK   + +A  ++D+M  +G   D  T 
Sbjct: 402 GNMTEATTTLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTL 461

Query: 296 NSLVNFSCKQGKYDDA--------------------VLVI---------------NNLLS 320
           N++++  C + K D+A                    +L++               + +  
Sbjct: 462 NTILHCLCVEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKE 521

Query: 321 RGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           R + P++ITYN+++  L  SR    A+DK L+ M E    P   TYNI+I+G C  G V+
Sbjct: 522 RQIMPSTITYNSVIGGLCQSRKVDQAIDK-LNEMLENGLVPDETTYNIIIHGFCLEGNVE 580

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +A    N+M+    +PD+ T N +L  LC+EGML +AL+L + L        ++TYNT+I
Sbjct: 581 KAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLFNTLVSKGKDIDVVTYNTII 640

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
             L K+G  E A  L  +M    + PD  T++ +I     A +++EA +   ++ + G
Sbjct: 641 SSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDAGRIKEAEEFTLKMVESG 698



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 205/421 (48%), Gaps = 3/421 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +L+   I  DR  +  K++         P     +  +G   +  Q   A  + ++M   
Sbjct: 110 SLLISFISSDRQHELHKLILHPTRDLPEPSKELLDTSIGAYVQMDQPHLATQIFNKMKRL 169

Query: 217 GCEPDVITYNTILRTMF---DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              P+++T NT++ ++     +     A    KD ++ G  P   ++ ILI   C +  +
Sbjct: 170 NYRPNLLTCNTLMNSLVRYPSSSSILLARQVLKDSIKLGVVPNTNSFNILIYGYCLESKV 229

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A++ ++ M+  GC PD V+YN++++   K+    +A  ++ ++ S+G+ PN  TYN L
Sbjct: 230 KDALDWVNKMSEFGCVPDTVSYNTILDALLKRRLLQEARDLLLDMKSKGLSPNKHTYNML 289

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +      G      K+++IM   +  PTV+TYN+L+NG C  G +D A    ++M   N 
Sbjct: 290 VCGYCRLGLLKEATKVIEIMTRNNLLPTVWTYNMLVNGFCNDGKIDEAFRIRDEMEKMNV 349

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD+VTYNT++    +    +E   L+  ++        +TYN ++  + KKG M +A  
Sbjct: 350 LPDVVTYNTLIDGCSQWRDSSEVYSLIEEMDKKGVKCNAVTYNIILKWMCKKGNMTEATT 409

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
              +M ENG+SPD +T+ TLI  +C+A ++ +A  ++ E+  +G K+       ++H LC
Sbjct: 410 TLDKMEENGLSPDCVTYNTLIGAYCKAGKMGKAFRMMDEMTSKGLKIDTWTLNTILHCLC 469

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
             KK+D A  +L       Y  D+  +  ++     D   + A  LW ++ E ++     
Sbjct: 470 VEKKLDEAYNLLCSASKRGYILDEVSYGILILGYFKDEKGDRALNLWDEMKERQIMPSTI 529

Query: 574 T 574
           T
Sbjct: 530 T 530



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 69/225 (30%), Positives = 100/225 (44%), Gaps = 12/225 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T N I+  FC  G +  A +  + M      PD + C  L+RGL R   +EKA K+ 
Sbjct: 562 DETTYNIIIHGFCLEGNVEKAFQFHNEMIENLFKPDVYTCNILLRGLCREGMLEKALKLF 621

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +V  G   D +TYN ++  LCK G+  +A  LL EM      PD  TY  I+  + D 
Sbjct: 622 NTLVSKGKDIDVVTYNTIISSLCKEGKFENAYDLLTEMEAKKLGPDQYTYKVIIAALTDA 681

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K+A  F    +  G         I+ +Q  K   + +   VL     E      + Y
Sbjct: 682 GRIKEAEEFTLKMVESG---------IVHDQNLK---LGKGQNVLTSEVSEHFDFKSIAY 729

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           +  +N  C Q KY DA+ +   +   G+  N  TY  L+  L  R
Sbjct: 730 SDQINELCNQHKYKDAMHLFVEVTKEGVALNKYTYLNLMEGLIKR 774


>gi|297797589|ref|XP_002866679.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312514|gb|EFH42938.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 915

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 135/447 (30%), Positives = 231/447 (51%), Gaps = 1/447 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T NK++  +C  G + +A++ + ++      PDF    +LI G  +   ++ A KV + M
Sbjct: 220 TYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFKEM 279

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G   + + Y  ++ GLC   +I  A+ L  +M    C P V TY  +++ +  + + 
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERK 339

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+   K+   KG  P + TYT+LI+ +C QC + +A E+L  M  +G  P+++TYN+L
Sbjct: 340 SEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNAL 399

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK+G  +DA+ V+  + SR + PN+ TYN L+     R    A+  +L+ M E   
Sbjct: 400 INGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRNVHKAMG-VLNKMLERKV 458

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TYN LI+G C+ G  D A    + M  +   PD  TY +++ +LCK   + EA  
Sbjct: 459 LPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACD 518

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   L      P ++ Y  LIDG  K G + +A ++  +M+     P+ +T   LI G C
Sbjct: 519 LFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLC 578

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              +++EA  L +++ K   +   S   ++IH L K    D A +  + M+SS  KPD  
Sbjct: 579 TDGKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAH 638

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++T ++    +G  ++A  +  K+ E
Sbjct: 639 TYTTFIQTYCREGRLQDAEDMVAKMKE 665



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/442 (27%), Positives = 233/442 (52%), Gaps = 2/442 (0%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           L N  +R  L D  K + +    +++ P+ +    ++ G  ++  +E+A++ + ++V +G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAG 248

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY  ++ G C+R  + SA  +  EM + GC  + + Y  ++  +    +  +A+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAM 308

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +       C P + TYT+LI+ +C     + A+ ++ +M  +G  P+I TY  L++  
Sbjct: 309 DLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLVKEMEEKGIKPNIHTYTVLIDSL 368

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C Q K + A  ++  +L +G+ PN ITYN L++    RG  +    ++++M   +  P  
Sbjct: 369 CSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELMESRNLRPNT 428

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN LI G CK   V +A+   N+M+ +   PD+VTYN+++   C+ G  + A +LL L
Sbjct: 429 RTYNELIKGYCKRN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSL 487

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +N     P   TY ++ID L K   +E+A  L+  + +  + P+ + +  LI G+C+A +
Sbjct: 488 MNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTALIDGYCKAGK 547

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V EA  +L+++  +     +  +  +IHGLC   K+  A  + E M+    +P  +  + 
Sbjct: 548 VNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDLQPTVSTDTI 607

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           ++ ++  DG  + AY+ +Q+++
Sbjct: 608 LIHRLLKDGDFDHAYRRFQQML 629



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 127/441 (28%), Positives = 221/441 (50%), Gaps = 9/441 (2%)

Query: 133 LTDASKLIDIMARRNQIPDFHF-------CIN-LIRGLIRIDRIEKASKVLQIMVMSGGV 184
           + D   ++D+  + N+   F         C N L+  L R   +++  +V   M+     
Sbjct: 156 VADTLFVLDLCRKMNKDESFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVC 215

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+  TYN MV G CK G +  A   +  +  +G +PD  TY +++           A   
Sbjct: 216 PNIYTYNKMVNGYCKVGNVEEANQYVSMIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKV 275

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           +K+   KGC    + YT LI  +C +  I  A+++   M  + C P + TY  L+   C 
Sbjct: 276 FKEMPLKGCRRNEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCG 335

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             +  +A+ ++  +  +G++PN  TY  L+ SL S+   +   ++L  M E    P V T
Sbjct: 336 SERKSEALNLVKEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVIT 395

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN LING CK G+++ A++    M S+N +P+  TYN ++   CK   +++A+ +L+ + 
Sbjct: 396 YNALINGYCKRGMIEDALDVVELMESRNLRPNTRTYNELIKGYCKRN-VHKAMGVLNKML 454

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P ++TYN+LIDG  + G  + A  L   M + G+ PD  T+ ++I   C++ +VE
Sbjct: 455 ERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVE 514

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA DL   + ++        Y  +I G CK+ KV+ A  +LE M+S    P+   F+ ++
Sbjct: 515 EACDLFDSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALI 574

Query: 545 KKVADDGMTEEAYKLWQKLIE 565
             +  DG  +EA  L +K+++
Sbjct: 575 HGLCTDGKLKEATLLEEKMVK 595



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 129/445 (28%), Positives = 217/445 (48%), Gaps = 20/445 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++ + CS+ KL  A +L+  M  +  +P+      LI G  +   IE A  V+++M
Sbjct: 360 TYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDALDVVELM 419

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+T TYN ++ G CKR  +  A+ +L++M      PDV+TYN+++     +G F
Sbjct: 420 ESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A         +G  P   TYT +I+ +CK   +  A ++ D +  +   P++V Y +L
Sbjct: 479 DSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLFDSLEQKDVIPNVVMYTAL 538

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK ++A L++  +LS+   PNS+T+N L+H L + G       + + M +   
Sbjct: 539 IDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLKEATLLEEKMVKIDL 598

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            PTV T  ILI+ L K G  D A   F QM+S   +PD  TY T +   C+EG L +A  
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFIQTYCREGRLQDAED 658

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW--- 475
           ++  +  +  SP L TY++LI G    G    A V+  +M + G  P   T  +LI    
Sbjct: 659 MVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCEPSQHTFLSLIKHLL 718

Query: 476 ------------GFCRADQVEE---AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
                       G C    + E    V+LL+++ + G      +Y  ++ G+C+   + +
Sbjct: 719 EMKYGKVKGGEPGVCVMSNMMEFDIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRV 778

Query: 521 AIQVLELMISSR-YKPDDTVFSTIV 544
           A +V + M       P + VF+ ++
Sbjct: 779 AEKVFDHMQQKEGISPSELVFNALL 803



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 122/435 (28%), Positives = 213/435 (48%), Gaps = 3/435 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E     ++   C   ++ +A  L   M   +  P       LI+ L   +R  +A  ++
Sbjct: 287 NEVAYTHLIHGLCVERRIDEAMDLFVKMKDDDCYPTVRTYTVLIKALCGSERKSEALNLV 346

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  P+  TY +++  LC + ++  A  LL +M   G  P+VITYN ++      
Sbjct: 347 KEMEEKGIKPNIHTYTVLIDSLCSQCKLEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  + A+   +    +   P   TY  LI+  CK+  + +A+ VL+ M      PD+VTY
Sbjct: 407 GMIEDALDVVELMESRNLRPNTRTYNELIKGYCKR-NVHKAMGVLNKMLERKVLPDVVTY 465

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMN 354
           NSL++  C+ G +D A  +++ +  RG+ P+  TY +++ SL  S+   +A D + D + 
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACD-LFDSLE 524

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P V  Y  LI+G CK G V+ A     +M+SKNC P+ +T+N ++  LC +G L 
Sbjct: 525 QKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTDGKLK 584

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA  L   +      P + T   LI  L K G  + A   + QM+ +G  PD  T+ T I
Sbjct: 585 EATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTYTTFI 644

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             +CR  ++++A D++ ++ + G       Y  +I G     + + A  VL+ M  +  +
Sbjct: 645 QTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHDTGCE 704

Query: 535 PDDTVFSTIVKKVAD 549
           P    F +++K + +
Sbjct: 705 PSQHTFLSLIKHLLE 719



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 101/448 (22%), Positives = 203/448 (45%), Gaps = 22/448 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C  G    A +L+ +M  R  +PD     ++I  L +  R+E+A  + 
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDPWTYTSMIDSLCKSKRVEEACDLF 520

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +     +P+ + Y  ++ G CK G++  A  +L++M    C P+ +T+N ++  +  +
Sbjct: 521 DSLEQKDVIPNVVMYTALIDGYCKAGKVNEAHLMLEKMLSKNCLPNSLTFNALIHGLCTD 580

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK K+A    +  ++    P + T TILI ++ K      A      M   G  PD  TY
Sbjct: 581 GKLKEATLLEEKMVKIDLQPTVSTDTILIHRLLKDGDFDHAYRRFQQMLSSGTKPDAHTY 640

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            + +   C++G+  DA  ++  +   G+ P+  TY++L+   G  G  ++   +L  M++
Sbjct: 641 TTFIQTYCREGRLQDAEDMVAKMKENGVSPDLFTYSSLIKGYGDLGRTNSAFVVLKRMHD 700

Query: 356 ASHSPTVFTYNILINGLC--KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
               P+  T+  LI  L   KYG V            K  +P +   + ++         
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYGKV------------KGGEPGVCVMSNMME-------F 741

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NGISPDDITHRT 472
           +  ++LL  +     +P   +Y  L+ G+ + G +  A  ++  M +  GISP ++    
Sbjct: 742 DIVVELLEKMVEHGVTPNAKSYEKLMLGICEIGNLRVAEKVFDHMQQKEGISPSELVFNA 801

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+   C+ ++  EA  ++ ++   G+  +  + +++I  L K  + +    V + ++   
Sbjct: 802 LLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQCG 861

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           Y  D+  +  I+  V   G+ E  Y+L+
Sbjct: 862 YYDDELAWKIIIDGVGKQGLVEAFYELF 889



 Score = 45.8 bits (107), Expect = 0.055,   Method: Compositional matrix adjust.
 Identities = 27/110 (24%), Positives = 52/110 (47%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L   C   K  +A+K++D M     +P    C  LI  L +    E+ + V Q ++ 
Sbjct: 800 NALLSCCCKLEKHNEAAKVVDDMICVGHLPQLESCKILICRLYKKGEKERGTSVFQNLLQ 859

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
            G   D + + +++ G+ K+G + +   L + M  +GC     TY+ ++ 
Sbjct: 860 CGYYDDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCTFSSQTYSLLIE 909


>gi|6630464|gb|AAF19552.1|AC007190_20 F23N19.4 [Arabidopsis thaliana]
          Length = 1244

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 241/453 (53%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            + ++  T + ++  FC R +L  A  ++  M +    P+     +L+ G     RI +A 
Sbjct: 726  IPHNHYTYSILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAV 785

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             ++  M ++G  P+T+T+N ++ GL    +   A+AL+D M   GC+PD++TY  ++  +
Sbjct: 786  ALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRMVAKGCQPDLVTYGVVVNGL 845

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               G    A        +    P ++ Y  +I+ +CK   +  A+ +  +M  +G  P++
Sbjct: 846  CKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEMETKGIRPNV 905

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            VTY+SL++  C  G++ DA  ++++++ R + P+  T++ L+ +    G     +K+ D 
Sbjct: 906  VTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKLVEAEKLYDE 965

Query: 353  MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
            M + S  P++ TY+ LING C +  +D A   F  MVSK+C PD+VTYNT++   CK   
Sbjct: 966  MVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKR 1025

Query: 413  LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            + E +++   ++        +TYN LI GL + G  + A  ++ +M+ +G+ P+ +T+ T
Sbjct: 1026 VEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNT 1085

Query: 473  LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
            L+ G C+  ++E+A+ + + + +   +     Y ++I G+CK+ KV+    +   +    
Sbjct: 1086 LLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKG 1145

Query: 533  YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             KPD   ++T++      G  EEA  L++++ E
Sbjct: 1146 VKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178



 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 236/444 (53%), Gaps = 16/444 (3%)

Query: 133  LTDASKLIDIMARRNQ---------------IPDFHFCIN-LIRGLIRIDRIEKASKVLQ 176
            + + SKL+  +A+ N+               IP  H+  + LI    R  ++  A  VL 
Sbjct: 695  IIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYSILINCFCRRSQLPLALAVLG 754

Query: 177  IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
             M+  G  P+ +T + ++ G C   +I  A+AL+D+M V+G +P+ +T+NT++  +F + 
Sbjct: 755  KMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHN 814

Query: 237  KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
            K  +A+      + KGC P L+TY +++  +CK+     A  +L+ M      P ++ YN
Sbjct: 815  KASEAMALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYN 874

Query: 297  SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            ++++  CK    DDA+ +   + ++G+ PN +TY++L+  L + G W    ++L  M E 
Sbjct: 875  TIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIER 934

Query: 357  SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              +P VFT++ LI+   K G +  A   +++MV ++  P IVTY++++   C    L+EA
Sbjct: 935  KINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEA 994

Query: 417  LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             Q+   +    C P ++TYNTLI G  K   +E+ M ++ +M + G+  + +T+  LI G
Sbjct: 995  KQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQG 1054

Query: 477  FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
              +A   + A ++ KE+   G       Y  ++ GLCK+ K++ A+ V E +  S+ +P 
Sbjct: 1055 LFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPT 1114

Query: 537  DTVFSTIVKKVADDGMTEEAYKLW 560
               ++ +++ +   G  E+ + L+
Sbjct: 1115 IYTYNIMIEGMCKAGKVEDGWDLF 1138



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 136/474 (28%), Positives = 228/474 (48%), Gaps = 36/474 (7%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T + +L  +C   ++++A  L+D M      P+      LI GL   ++  +A  ++  M
Sbjct: 767  TLSSLLNGYCHSKRISEAVALVDQMFVTGYQPNTVTFNTLIHGLFLHNKASEAMALIDRM 826

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            V  G  PD +TY ++V GLCKRG    A  LL++M     EP V+ YNTI+  +      
Sbjct: 827  VAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHM 886

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
              A+  +K+   KG  P ++TY+ LI  +C     + A  +L DM     +PD+ T+++L
Sbjct: 887  DDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSAL 946

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            ++   K+GK  +A  + + ++ R ++P+ +TY++L++        D   ++ + M     
Sbjct: 947  IDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHC 1006

Query: 359  SPTVFTYNILINGLCKY----------------GLV-------------------DRAIN 383
             P V TYN LI G CKY                GLV                   D A  
Sbjct: 1007 FPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQE 1066

Query: 384  SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
             F +MVS    P+I+TYNT+L  LCK G L +A+ +   L  S   P + TYN +I+G+ 
Sbjct: 1067 IFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 1126

Query: 444  KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
            K G +E    L+  +   G+ PD + + T+I GFCR    EEA  L KE+ + G    + 
Sbjct: 1127 KAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSG 1186

Query: 504  AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
             Y  +I    +    + + ++++ M S  +  D +    +V  +  DG  ++++
Sbjct: 1187 CYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 1239



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 226/447 (50%), Gaps = 6/447 (1%)

Query: 132 KLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           KL DA  L   M +    P   DF+  ++ I  L + D +    K ++++   G   D  
Sbjct: 168 KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL---GIRNDLY 224

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T+N+++   C   Q+  A+++L +M   G EPD +T  +++       +   A+      
Sbjct: 225 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 284

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  G  P ++ Y  +I+ +CK   +  A +   ++  +G  P++VTY +LVN  C   ++
Sbjct: 285 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 344

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            DA  ++++++ + + PN ITY+ LL +    G      ++ + M   S  P + TY+ L
Sbjct: 345 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 404

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           INGLC +  +D A   F+ MVSK C  D+V+YNT++   CK   + + ++L   ++    
Sbjct: 405 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 464

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
               +TYNTLI G  + G ++KA   + QM   GISPD  T+  L+ G C   ++E+A+ 
Sbjct: 465 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 524

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           + +++ KR   +    Y  VI G+CK+ KV+ A  +   +     KPD   ++T++  + 
Sbjct: 525 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 584

Query: 549 DDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             G+  E   L+ K+ +  + +   TL
Sbjct: 585 TKGLLHEVEALYTKMKQEGLMKNDCTL 611



 Score =  209 bits (533), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 135/456 (29%), Positives = 220/456 (48%), Gaps = 25/456 (5%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   ++  FC R +++DA  L+D M      PD      +I  L +  R+  A  
Sbjct: 255 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 314

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
             + +   G  P+ +TY  +V GLC   +   A  LL +M      P+VITY+ +L    
Sbjct: 315 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 374

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            NGK  +A   +++ +R    P ++TY+ LI  +C    I  A ++ D M  +GC  D+V
Sbjct: 375 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 434

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN+L+N  CK  + +D + +   +  RG+  N++TYNTL+      G  D   +    M
Sbjct: 435 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +    SP ++TYNIL+ GLC  G +++A+  F  M  +    DIVTY TV+  +CK G +
Sbjct: 495 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 554

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT---- 469
            EA  L   L+     P ++TY T++ GL  KG + +   LY +M + G+  +D T    
Sbjct: 555 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCTLSDG 614

Query: 470 ---------HRTLIWGFC-------RADQVEEAVDLLKEI-GKRGNKMRNSAYRLVIHGL 512
                     + L  G+        ++   ++A+ LL+   GK     R    R   +GL
Sbjct: 615 DITLSAELIKKMLSCGYAPSLLKDIKSGVCKKALSLLRAFSGKTSYDYREKLSR---NGL 671

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
            +  K+D A+ +   M+ SR  P    FS ++  +A
Sbjct: 672 SEL-KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIA 706



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 208/423 (49%), Gaps = 8/423 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + ND  T N ++  FC   +++ A  ++  M +    PD     +L+ G  R +R+  A 
Sbjct: 219 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 278

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PD + YN ++  LCK  ++  A     E+   G  P+V+TY  ++  +
Sbjct: 279 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 338

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            ++ ++  A     D ++K   P +ITY+ L++   K   +  A E+ ++M      PDI
Sbjct: 339 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 398

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY+SL+N  C   + D+A  + + ++S+G   + ++YNTL++        +   K+   
Sbjct: 399 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 458

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M++        TYN LI G  + G VD+A   F+QM      PDI TYN +LG LC  G 
Sbjct: 459 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 518

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L +AL +   +        ++TY T+I G+ K G +E+A  L+  +   G+ PD +T+ T
Sbjct: 519 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 578

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++ G C    + E   L  ++ + G  M+N               + ++ ++++ M+S  
Sbjct: 579 MMSGLCTKGLLHEVEALYTKMKQEG-LMKNDC-------TLSDGDITLSAELIKKMLSCG 630

Query: 533 YKP 535
           Y P
Sbjct: 631 YAP 633



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 201/398 (50%)

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
           +R  ++  A  +   MV S   P  + +N ++  + K  +    I+L  +M V G   D+
Sbjct: 164 LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 223

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            T+N ++       +   A+      L+ G  P  +T   L+   C++  ++ A+ ++D 
Sbjct: 224 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 283

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G  PDIV YN++++  CK  + +DA      +  +G+ PN +TY  L++ L +   
Sbjct: 284 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 343

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           W    ++L  M +   +P V TY+ L++   K G V  A   F +MV  +  PDIVTY++
Sbjct: 344 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 403

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LC    ++EA Q+  L+    C   +++YNTLI+G  K   +E  M L+ +M + G
Sbjct: 404 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 463

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +  + +T+ TLI GF +A  V++A +   ++   G       Y +++ GLC + +++ A+
Sbjct: 464 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 523

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            + E M       D   ++T+++ +   G  EEA+ L+
Sbjct: 524 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLF 561



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 106/397 (26%), Positives = 175/397 (44%), Gaps = 70/397 (17%)

Query: 202  QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
            ++  A+AL  EM  S   P +I ++ +L  +    KF   I   +     G P    TY+
Sbjct: 675  KLDDAVALFGEMVKSRPFPSIIEFSKLLSAIAKMNKFDVVISLGEQMQNLGIPHNHYTYS 734

Query: 262  ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            ILI   C++  +  A+ VL  M   G  P+IVT +SL+N  C   +  +AV +++ +   
Sbjct: 735  ILINCFCRRSQLPLALAVLGKMMKLGYEPNIVTLSSLLNGYCHSKRISEAVALVDQMFVT 794

Query: 322  GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            G +PN++                                   T+N LI+GL  +     A
Sbjct: 795  GYQPNTV-----------------------------------TFNTLIHGLFLHNKASEA 819

Query: 382  INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
            +   ++MV+K CQPD+VTY  V+  LCK G  + A  LL+ +      P ++ YNT+IDG
Sbjct: 820  MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 879

Query: 442  LAKKGCMEKAMVLYGQMMENGISPDDITHRTLI--------W------------------ 475
            L K   M+ A+ L+ +M   GI P+ +T+ +LI        W                  
Sbjct: 880  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 939

Query: 476  ---------GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
                      F +  ++ EA  L  E+ KR        Y  +I+G C   ++D A Q+ E
Sbjct: 940  VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 999

Query: 527  LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             M+S    PD   ++T++K        EE  ++++++
Sbjct: 1000 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREM 1036



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 1/302 (0%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T + ++  F   GKL +A KL D M +R+  P      +LI G    DR+++A ++ 
Sbjct: 939  DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 998

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            + MV     PD +TYN ++ G CK  ++   + +  EMS  G   + +TYN +++ +F  
Sbjct: 999  EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 1058

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            G    A   +K+ +  G PP ++TY  L++ +CK   + +A+ V + +      P I TY
Sbjct: 1059 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 1118

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            N ++   CK GK +D   +  NL  +G++P+ + YNT++     +G  +  D +   M E
Sbjct: 1119 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 1178

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                P    YN LI    + G  + +     +M S     D  T   V   L  +G L++
Sbjct: 1179 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDK 1237

Query: 416  AL 417
            + 
Sbjct: 1238 SF 1239



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 165/334 (49%)

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           +T   + K   AI  + D ++    P ++ +  L+  + K       I +   M + G  
Sbjct: 161 KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 220

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            D+ T+N ++N  C   +   A+ ++  +L  G EP+ +T  +L++    R        +
Sbjct: 221 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 280

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           +D M E  + P +  YN +I+ LCK   V+ A + F ++  K  +P++VTY  ++  LC 
Sbjct: 281 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 340

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
               ++A +LL  +     +P +ITY+ L+D   K G + +A  L+ +M+   I PD +T
Sbjct: 341 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 400

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +LI G C  D+++EA  +   +  +G      +Y  +I+G CK+K+V+  +++   M 
Sbjct: 401 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 460

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                 +   ++T+++     G  ++A + + ++
Sbjct: 461 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 494


>gi|302794530|ref|XP_002979029.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
 gi|300153347|gb|EFJ19986.1| hypothetical protein SELMODRAFT_109908 [Selaginella moellendorffii]
          Length = 500

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 235/444 (52%), Gaps = 1/444 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + I+++     K  ++ K+++ M      PD      +++G  R + +EKA +V Q M
Sbjct: 12  TYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHM 71

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V SG  PD ++Y++++ GL K G++  ++ +L EM + G  P +  Y++++R +    + 
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   + + +R G  P  + +  LI  +C+   +  A E    M   GC P++  YN L
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  G+ + A  +   + S    P+ +TYNTLL ++      +   K+ + M  A +
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V T++ LI+GLC+ G +++A+  F  M+   C+P+  TY T++  LC+   + +A +
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARE 311

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGF 477
           L   +  +   P  + YN+LI G  K+G M++A  LY +M    G+ P  +T  TLI GF
Sbjct: 312 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 371

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  ++  A +L+ E+G +G    +  YR++I GL ++ K+D A++V + M   ++  D 
Sbjct: 372 CKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 431

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQ 561
               + V  +   G  ++AY +++
Sbjct: 432 VSCVSFVGGLCKTGNIDQAYAVFE 455



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 114/419 (27%), Positives = 210/419 (50%), Gaps = 5/419 (1%)

Query: 113 VENDEKTNNK----ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           VE+  K +N     ++      GKL ++ K++  M  R Q P      +L+R L +  R+
Sbjct: 72  VESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKARRV 131

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + AS +   M+  G  PD + +  ++ GLC+ G+++ A     +M   GC+P+V  YN +
Sbjct: 132 DHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVYNVL 191

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L  +  +G+ +QA   + +     C P ++TY  L++ VCK   +    ++ + M   G 
Sbjct: 192 LHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRAAGY 251

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P+++T+++L++  C+ G+ + A+ V  ++L  G +PN  TY TL+  L          +
Sbjct: 252 VPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQARE 311

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV-SKNCQPDIVTYNTVLGAL 407
           + + M +A   P    YN LI G CK G +D A   + +M      QP IVT+NT++   
Sbjct: 312 LFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGF 371

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CK G L  A +L+  +     +    TY  LI GL++   +++A+ +Y QM E     D 
Sbjct: 372 CKLGKLGRANELVAEMGTKGLAADSCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDP 431

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           ++  + + G C+   +++A  + +   K G       +R++   L K  +V+ A +++E
Sbjct: 432 VSCVSFVGGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 490



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 192/360 (53%), Gaps = 1/360 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           +  TY+ ++  L K  +   +  +L+EM  +GC PDV  +N +++    +   ++A   +
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           +  +  G  P  ++Y ILI  + K   +  ++++L +M + G +P +  Y+SLV    K 
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
            + D A  + + ++  G  P+ + +  L+  L   G      +    M +    P V  Y
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N+L++GLC  G +++A   F +M S +C PD+VTYNT+L A+CK   + E  +L   +  
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
           +   P +IT++TLI GL + G +EKA+ ++G M+E G  P+  T+ TLI G CRA++V +
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL-ELMISSRYKPDDTVFSTIV 544
           A +L +++ +        AY  +I G CK   +D A ++  E+   +  +P    F+T++
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 368



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 101/343 (29%), Positives = 180/343 (52%)

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           +V TY++I++++    K +++    ++ +  GC P +  +  +++   +   + +A EV 
Sbjct: 9   NVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVY 68

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
             M   G  PD V+Y+ L++   K GK D+++ +++ ++ RG  P+   Y++L+ +L   
Sbjct: 69  QHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALAKA 128

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
              D    + D M    H P    +  LI GLC+ G V  A   F QM    CQP++  Y
Sbjct: 129 RRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVPVY 188

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N +L  LC  G L +A  L   +   SCSP ++TYNTL+D + K   +E+   L+  M  
Sbjct: 189 NVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAMRA 248

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G  P+ IT  TLI G CR  ++E+A+++   + + G K     Y  +I GLC+++KV  
Sbjct: 249 AGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKVIQ 308

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           A ++ E M  +   PD   +++++      G  +EA KL++++
Sbjct: 309 ARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREM 351



 Score =  125 bits (315), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 69/312 (22%), Positives = 148/312 (47%), Gaps = 35/312 (11%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           + ++ TY+S++    K+ K +++  V+  +++ G  P+   +N ++         +   +
Sbjct: 7   AANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKARE 66

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA-- 406
           +   M E+ + P   +Y+ILI+GL K G +D ++   ++MV +   P +  Y++++ A  
Sbjct: 67  VYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMVMRGQTPSMQAYSSLVRALA 126

Query: 407 ---------------------------------LCKEGMLNEALQLLHLLNGSSCSPCLI 433
                                            LC+ G + +A +    +    C P + 
Sbjct: 127 KARRVDHASSLFDEMIRGGHHPDRLMFYELILGLCQAGKVKDASERFKQMPKHGCQPNVP 186

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            YN L+ GL   G +E+A  L+ +M  +  SPD +T+ TL+   C+A +VEE   L + +
Sbjct: 187 VYNVLLHGLCSSGQLEQANTLFAEMKSHSCSPDVVTYNTLLDAVCKARRVEEGCKLFEAM 246

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
              G       +  +IHGLC++ +++ A++V   M+ +  KP+   ++T++  +      
Sbjct: 247 RAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLISGLCRAEKV 306

Query: 554 EEAYKLWQKLIE 565
            +A +L++K+ +
Sbjct: 307 IQARELFEKMTQ 318


>gi|224092336|ref|XP_002309564.1| predicted protein [Populus trichocarpa]
 gi|222855540|gb|EEE93087.1| predicted protein [Populus trichocarpa]
          Length = 593

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 126/388 (32%), Positives = 206/388 (53%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI  L ++ +  +A ++   MV  G  PD  TY  ++ GLCK G+  +A  LL +M  +G
Sbjct: 174 LINWLCKVGKFAQAMELFDDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAG 233

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+P+V+TY+TI+ +   + +  +A+  +     KG  P + TY  LI+ +C       A 
Sbjct: 234 CQPNVVTYSTIIDSHRKDRRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEAS 293

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L++M      PDIVT+N LV+  CK+GK  +A  V+  +   G+EP+ +TY++L++  
Sbjct: 294 ALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGY 353

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             R       K+ D M      P VF+YNILING CK   +D A   FN+M+ +   P+ 
Sbjct: 354 SLRSEVVEARKLFDAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNN 413

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V+YNT++  LC+ G L EA  L   ++ +   P L TY+ L+DG  K+G   KA  L+  
Sbjct: 414 VSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRA 473

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M      P+ + +  LI   C++  + +A  L  E+  +G +     Y  +I+GLCK   
Sbjct: 474 MQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGL 533

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVK 545
           +D A++    M      PD+  ++ I++
Sbjct: 534 LDEALEAFRNMEEDGCPPDEISYNVIIR 561



 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 120/382 (31%), Positives = 197/382 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+   C  G+   A+ L+  M      P+      +I    +  R+ +A  + 
Sbjct: 202 DVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDRRVNEALDIF 261

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G  PD  TYN ++ GLC   Q + A ALL+EM      PD++T+N ++ T+   
Sbjct: 262 SYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKE 321

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A G  K     G  P ++TY+ L+     +  +  A ++ D M  +GC PD+ +Y
Sbjct: 322 GKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSY 381

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK  + D+A  + N ++ +G+ PN+++YNTL+H L   G       +   M+ 
Sbjct: 382 NILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHT 441

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             + P +FTY+IL++G CK G   +A   F  M S   +P++V YN ++ A+CK G L +
Sbjct: 442 NGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRD 501

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   L      P    Y T+I+GL K+G +++A+  +  M E+G  PD+I++  +I 
Sbjct: 502 ARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIR 561

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           GF        AV L+ E+  +G
Sbjct: 562 GFLHHKDESRAVQLIGEMRDKG 583



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 225/438 (51%), Gaps = 1/438 (0%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI-EKASKVLQIMVMSGGVPD 186
           CS   + DA    + M  R  +P       L+  ++++ +  +    + + M ++G  P+
Sbjct: 73  CSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSPN 132

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             T ++++       ++  A ++L ++   G +P ++T+ T++  +   GKF QA+  + 
Sbjct: 133 IYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELFD 192

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           D + +GC P + TYT +I  +CK    A A  +L  M   GC P++VTY+++++   K  
Sbjct: 193 DMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKDR 252

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           + ++A+ + + +  +G+ P+  TYN+L+  L +   W     +L+ M   +  P + T+N
Sbjct: 253 RVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFN 312

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           +L++ +CK G V  A      M     +PD+VTY++++        + EA +L   +   
Sbjct: 313 VLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITK 372

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            C P + +YN LI+G  K   +++A  L+ +M+  G++P+++++ TLI G C+   + EA
Sbjct: 373 GCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREA 432

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            +L K +   GN      Y +++ G CK      A ++   M S+  KP+  +++ ++  
Sbjct: 433 RNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDA 492

Query: 547 VADDGMTEEAYKLWQKLI 564
           +   G   +A KL+ +L 
Sbjct: 493 MCKSGNLRDARKLFSELF 510



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 149/308 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N ++Q  C+  +  +AS L++ M   N +PD      L+  + +  ++ +A 
Sbjct: 269 ISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTFNVLVDTICKEGKVSEAQ 328

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL+ M   G  PD +TY+ ++ G   R ++  A  L D M   GC+PDV +YN ++   
Sbjct: 329 GVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLFDAMITKGCKPDVFSYNILINGY 388

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +  +A   + + + +G  P  ++Y  LI  +C+   +  A  +  +M   G  P++
Sbjct: 389 CKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQLGSLREARNLFKNMHTNGNLPNL 448

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY+ L++  CKQG +  A  +   + S   +PN + YN L+ ++   G      K+   
Sbjct: 449 FTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMYNILIDAMCKSGNLRDARKLFSE 508

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +      P    Y  +INGLCK GL+D A+ +F  M    C PD ++YN ++        
Sbjct: 509 LFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPDEISYNVIIRGFLHHKD 568

Query: 413 LNEALQLL 420
            + A+QL+
Sbjct: 569 ESRAVQLI 576



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 135/284 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C  GK+++A  ++  M      PD     +L+ G      + +A K+ 
Sbjct: 307 DIVTFNVLVDTICKEGKVSEAQGVLKTMTEMGVEPDVVTYSSLMYGYSLRSEVVEARKLF 366

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PD  +YN+++ G CK  +I  A  L +EM   G  P+ ++YNT++  +   
Sbjct: 367 DAMITKGCKPDVFSYNILINGYCKVKRIDEAKQLFNEMIHQGLTPNNVSYNTLIHGLCQL 426

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++A   +K+    G  P L TY+IL++  CKQ    +A  +   M      P++V Y
Sbjct: 427 GSLREARNLFKNMHTNGNLPNLFTYSILLDGFCKQGYFGKAFRLFRAMQSTYSKPNLVMY 486

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  CK G   DA  + + L  +G++PN+  Y T+++ L   G  D   +    M E
Sbjct: 487 NILIDAMCKSGNLRDARKLFSELFVKGLQPNAQIYTTIINGLCKEGLLDEALEAFRNMEE 546

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
               P   +YN++I G   +    RA+    +M  K    D+ T
Sbjct: 547 DGCPPDEISYNVIIRGFLHHKDESRAVQLIGEMRDKGFIADVGT 590



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/268 (29%), Positives = 127/268 (47%), Gaps = 1/268 (0%)

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSP 360
           +C     DDA+   N++L R   P  I +  LL ++   G  +D V  +   M  A  SP
Sbjct: 72  ACSFRNIDDALASFNHMLHRKPLPCIIQFTKLLSAIVKMGQYYDTVISLTKQMELAGLSP 131

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            ++T +ILIN       VD A +   +++    QP IVT+ T++  LCK G   +A++L 
Sbjct: 132 NIYTLSILINCFSHLQRVDLAFSVLAKIIKLGLQPTIVTFTTLINWLCKVGKFAQAMELF 191

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C P + TY T+I+GL K G    A  L  +M E G  P+ +T+ T+I    + 
Sbjct: 192 DDMVARGCRPDVYTYTTIINGLCKIGETAAAAGLLKKMEEAGCQPNVVTYSTIIDSHRKD 251

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +V EA+D+   +  +G       Y  +I GLC   +   A  +L  M S    PD   F
Sbjct: 252 RRVNEALDIFSYMKVKGISPDIFTYNSLIQGLCNFSQWKEASALLNEMRSLNIMPDIVTF 311

Query: 541 STIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + +V  +  +G   EA  + + + E  V
Sbjct: 312 NVLVDTICKEGKVSEAQGVLKTMTEMGV 339


>gi|224145304|ref|XP_002336216.1| predicted protein [Populus trichocarpa]
 gi|222832672|gb|EEE71149.1| predicted protein [Populus trichocarpa]
          Length = 616

 Score =  229 bits (585), Expect = 2e-57,   Method: Compositional matrix adjust.
 Identities = 125/388 (32%), Positives = 209/388 (53%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL ++ +  +A ++   MV  G  PD  TY  ++ GLCK G+  +A  L  +M  +G
Sbjct: 198 LINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAG 257

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+PDV+TY+TI+ ++  + +  +A+  +     KG  P + TY  LI+ +C       A 
Sbjct: 258 CQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREAS 317

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L++M      P+IVT++ L+N  CK+G   +A  V+  +   G+EPN +TY++L++  
Sbjct: 318 AMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGY 377

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             +       K+ D+M      P VF+YNILING CK   +  A   FN+M+ +   PDI
Sbjct: 378 SLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDI 437

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V+YNT++  LC+ G L EA  L   +  +   P L TY+ L+DG  K+G + KA  L+  
Sbjct: 438 VSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRA 497

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M    + P+ + +  LI   C++  ++EA  L  E+  +G +     Y  +I+GLCK   
Sbjct: 498 MQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGL 557

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVK 545
           +D A++    M      P++  ++ I++
Sbjct: 558 LDEALEAFRNMEEDGCPPNEFSYNVIIR 585



 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 122/416 (29%), Positives = 220/416 (52%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD +    LI    ++ R++    VL  ++  G     +T+N ++ GLCK G+   A+ L
Sbjct: 155 PDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVEL 214

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
            D+M   G +PDV TY TI+  +   G+   A G ++     GC P ++TY+ +I+ +CK
Sbjct: 215 FDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCK 274

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A+++   M  +G SP+I TYNSL+   C   ++ +A  ++N ++S  + PN +T
Sbjct: 275 DRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVT 334

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           ++ L++     G       +L  M E    P V TY+ L+NG      V  A   F+ M+
Sbjct: 335 FSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMI 394

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           +K C+PD+ +YN ++   CK   + EA QL + +     +P +++YNTLIDGL + G + 
Sbjct: 395 TKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLR 454

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A  L+  M+ NG  PD  T+  L+ GFC+   + +A  L + +     K     Y ++I
Sbjct: 455 EAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILI 514

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +CKS+ +  A ++   +     +P+  +++TI+  +  +G+ +EA + ++ + E
Sbjct: 515 DAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEE 570



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 214/418 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK   A +L D M  R   PD H    +I GL +I     A+ + + M
Sbjct: 194 TFNTLINGLCKVGKFGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKM 253

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  PD +TY+ ++  LCK  ++  A+ +   M   G  P++ TYN++++ + +  ++
Sbjct: 254 GEAGCQPDVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRW 313

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     + +     P ++T+++LI   CK+  +  A  VL  M   G  P++VTY+SL
Sbjct: 314 REASAMLNEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSL 373

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N    Q +  +A  + + ++++G +P+  +YN L++            ++ + M     
Sbjct: 374 MNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGL 433

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P + +YN LI+GLC+ G +  A + F  M++    PD+ TY+ +L   CK+G L +A +
Sbjct: 434 TPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFR 493

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +  +   P ++ YN LID + K   +++A  L+ ++   G+ P+   + T+I G C
Sbjct: 494 LFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLC 553

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +   ++EA++  + + + G      +Y ++I G  + K    A+Q++  M    +  D
Sbjct: 554 KEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVAD 611



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 206/387 (53%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M ++G  PDT T +M++    +  ++    ++L ++   G +  ++T+NT++  +   GK
Sbjct: 148 MELAGLSPDTYTLHMLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGK 207

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F QA+  + D + +G  P + TYT +I  +CK      A  +   M   GC PD+VTY++
Sbjct: 208 FGQAVELFDDMVARGYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYST 267

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  CK  + ++A+ + + + ++G+ PN  TYN+L+  L +   W     +L+ M   +
Sbjct: 268 IIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLN 327

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P + T+++LIN  CK G V  A      M     +P++VTY++++     +  + EA 
Sbjct: 328 IMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEAR 387

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L  ++    C P + +YN LI+G  K   + +A  L+ +M+  G++PD +++ TLI G 
Sbjct: 388 KLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGL 447

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  ++ EA DL K +   GN      Y +++ G CK   +  A ++   M S+  KP+ 
Sbjct: 448 CQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNM 507

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
            +++ ++  +      +EA KL+ +L 
Sbjct: 508 VMYNILIDAMCKSRNLKEARKLFSELF 534



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 102/354 (28%), Positives = 182/354 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + I+ + C   ++ +A  +   M  +   P+     +LI+GL    R  +AS +L
Sbjct: 261 DVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAML 320

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+    +P+ +T+++++   CK G +  A  +L  M+  G EP+V+TY++++      
Sbjct: 321 NEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQ 380

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A   +   + KGC P + +Y ILI   CK   I  A ++ ++M  +G +PDIV+Y
Sbjct: 381 AEVVEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 440

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  C+ G+  +A  +  N+L+ G  P+  TY+ LL     +G      ++   M  
Sbjct: 441 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 500

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P +  YNILI+ +CK   +  A   F+++  +  QP++  Y T++  LCKEG+L+E
Sbjct: 501 TYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNVQIYTTIINGLCKEGLLDE 560

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           AL+    +    C P   +YN +I G  +     +A+ L G+M E G   D  T
Sbjct: 561 ALEAFRNMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMREKGFVADVAT 614



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 102/363 (28%), Positives = 184/363 (50%), Gaps = 1/363 (0%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGCPPYLITYT 261
           I  A+A  + M      P +I +N +L  +     +  A+     Q+   G  P   T  
Sbjct: 102 IDDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLH 161

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           +LI    +   +     VL  +   G    IVT+N+L+N  CK GK+  AV + +++++R
Sbjct: 162 MLINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVAR 221

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G +P+  TY T+++ L   G   A   +   M EA   P V TY+ +I+ LCK   V+ A
Sbjct: 222 GYQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEA 281

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           ++ F+ M +K   P+I TYN+++  LC      EA  +L+ +   +  P ++T++ LI+ 
Sbjct: 282 LDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINI 341

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K+G + +A  +   M E G+ P+ +T+ +L+ G+    +V EA  L   +  +G K  
Sbjct: 342 FCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPD 401

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             +Y ++I+G CK+K++  A Q+   MI     PD   ++T++  +   G   EA+ L++
Sbjct: 402 VFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFK 461

Query: 562 KLI 564
            ++
Sbjct: 462 NML 464



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 63/226 (27%), Positives = 117/226 (51%), Gaps = 2/226 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKA 171
           VE +  T + ++  +  + ++ +A KL D+M  +   PD F + I LI G  +  RI +A
Sbjct: 363 VEPNVVTYSSLMNGYSLQAEVVEARKLFDVMITKGCKPDVFSYNI-LINGYCKAKRIGEA 421

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            ++   M+  G  PD ++YN ++ GLC+ G++R A  L   M  +G  PD+ TY+ +L  
Sbjct: 422 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 481

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G   +A   ++        P ++ Y ILI+ +CK   +  A ++  ++ ++G  P+
Sbjct: 482 FCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 541

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +  Y +++N  CK+G  D+A+    N+   G  PN  +YN ++   
Sbjct: 542 VQIYTTIINGLCKEGLLDEALEAFRNMEEDGCPPNEFSYNVIIRGF 587



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 79/261 (30%), Positives = 126/261 (48%), Gaps = 1/261 (0%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           DDA+   N++L R   P  I +N LL ++   R   DAV  +   M  A  SP  +T ++
Sbjct: 103 DDALAYFNHMLHRKPRPCIIQFNKLLSAIVKMRHYHDAVISLSKQMELAGLSPDTYTLHM 162

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LIN   +   VD   +   +++    Q  IVT+NT++  LCK G   +A++L   +    
Sbjct: 163 LINCFFQLQRVDLGFSVLAKIIKLGLQLTIVTFNTLINGLCKVGKFGQAVELFDDMVARG 222

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P + TY T+I+GL K G    A  L+ +M E G  PD +T+ T+I   C+  +V EA+
Sbjct: 223 YQPDVHTYTTIINGLCKIGETVAAAGLFRKMGEAGCQPDVVTYSTIIDSLCKDRRVNEAL 282

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           D+   +  +G       Y  +I GLC   +   A  +L  M+S    P+   FS ++   
Sbjct: 283 DIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIF 342

Query: 548 ADDGMTEEAYKLWQKLIEWKV 568
             +G   EA  + + + E  V
Sbjct: 343 CKEGNVFEARGVLKTMTEMGV 363


>gi|357499959|ref|XP_003620268.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495283|gb|AES76486.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 652

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 235/444 (52%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  G +  A  +   + +   +PD      LI+GL    +I++A      +V 
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVA 183

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D I+Y  ++ GLCK G+ R+A+ LL  +  +  +P+V+ YNTI+ +M       +
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + + KG  P ++TY+ LI   C    +  AI++ + M +E   PD+ T+N LVN
Sbjct: 244 AFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVN 303

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK GK  +   V + ++ +G++PN +TYN+L+         +    I + M +   +P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + +Y+I+ING CK    D A+N F +M  KN  PD+VTY++++  L K G ++ ALQL+
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++     P + TYN+++D L K   ++KA+ L  ++ + GI P+  T+  LI G C++
Sbjct: 424 DQMHDRGVPPTIRTYNSILDALCKIHQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQS 483

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++E+A  + + +  +G+ +    Y ++I G C     + A+ +L  M  +   PD   +
Sbjct: 484 GKLEDARKVFEGLLVKGHNLNVDTYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
             I+  +      + A KL +++I
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMI 567



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 124/443 (27%), Positives = 228/443 (51%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           NKIL +            L   M  R   P+   C  LI    ++  I  A  V   ++ 
Sbjct: 89  NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G VPDTIT+  ++ GLC +GQI+ A    D++   G   D I+Y T++  +   G+ + 
Sbjct: 149 MGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +        P ++ Y  +I+ +CK   +  A ++  +M  +G SPD+VTY++L++
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALIS 268

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  GK +DA+ + N ++   ++P+  T+N L+++    G       + D+M +    P
Sbjct: 269 GFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP 328

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN L++G C    V++A + FN M      PDI +Y+ ++   CK    +EA+ L 
Sbjct: 329 NFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLF 388

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++  +  P ++TY++LIDGL+K G +  A+ L  QM + G+ P   T+ +++   C+ 
Sbjct: 389 KEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKI 448

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            QV++A+ LL ++  +G +     Y ++I GLC+S K++ A +V E ++   +  +   +
Sbjct: 449 HQVDKAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTY 508

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + +++    +G+  EA  L  K+
Sbjct: 509 TIMIQGFCVEGLFNEALALLSKM 531



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/422 (24%), Positives = 197/422 (46%), Gaps = 5/422 (1%)

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           ++ R   +PD HF     +    +            +  S    + I+Y+          
Sbjct: 10  MLPRYYDVPDSHFVPKKFQSFQFLKNTH-----FNFIPYSSSKINFISYSSTSTTFHSNN 64

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
            +  A++L + +      P    +N IL ++  +  +   +   +    +G  P L+   
Sbjct: 65  DVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCN 124

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           ILI   C+   I  A  V   +   G  PD +T+ +L+   C +G+   A L  + +++ 
Sbjct: 125 ILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLKGQIQQAFLFHDKVVAL 184

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G   + I+Y TL+H L   G   A   +L  ++     P V  YN +I+ +CK  LV+ A
Sbjct: 185 GFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEA 244

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
            + F++M+SK   PD+VTY+ ++   C  G LN+A+ L + +   +  P + T+N L++ 
Sbjct: 245 FDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMILENIKPDVYTFNILVNA 304

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K G M++   ++  MM+ GI P+ +T+ +L+ G+C   +V +A  +   + + G    
Sbjct: 305 FCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPD 364

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             +Y ++I+G CK KK D A+ + + M      PD   +S+++  ++  G    A +L  
Sbjct: 365 IQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVD 424

Query: 562 KL 563
           ++
Sbjct: 425 QM 426



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 177/371 (47%), Gaps = 4/371 (1%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L   DG  V+ +    N I+ + C    + +A  L   M  +   PD      LI G   
Sbjct: 213 LQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCI 272

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           + ++  A  +   M++    PD  T+N++V   CK G+++    + D M   G +P+ +T
Sbjct: 273 LGKLNDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN+++       +  +A   +    + G  P + +Y+I+I   CK      A+ +  +M 
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH 392

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +   PD+VTY+SL++   K G+   A+ +++ +  RG+ P   TYN++L +L      D
Sbjct: 393 RKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPTIRTYNSILDALCKIHQVD 452

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +L  + +    P ++TY+ILI GLC+ G ++ A   F  ++ K    ++ TY  ++
Sbjct: 453 KAIALLTKLKDKGIQPNMYTYSILIKGLCQSGKLEDARKVFEGLLVKGHNLNVDTYTIMI 512

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
              C EG+ NEAL LL  +  + C P   TY  +I  L KK   + A  L  +M+  G+ 
Sbjct: 513 QGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGVR 572

Query: 465 PDDITHRTLIW 475
           P  I     IW
Sbjct: 573 PRQIA----IW 579



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 125/275 (45%)

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           + ++Y+S           DDAV + N LL R   P +  +N +L SL     +  V  + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M      P +   NILIN  C+ GL+  A + F +++     PD +T+ T++  LC +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLIKGLCLK 168

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G + +A      +         I+Y TLI GL K G    A+ L  ++  N + P+ + +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            T+I   C+   V EA DL  E+  +G       Y  +I G C   K++ AI +   MI 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMISKGISPDVVTYSALISGFCILGKLNDAIDLFNKMIL 288

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              KPD   F+ +V     DG  +E   ++  +++
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMK 323


>gi|302775073|ref|XP_002970953.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
 gi|300161664|gb|EFJ28279.1| hypothetical protein SELMODRAFT_94034 [Selaginella moellendorffii]
          Length = 577

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 134/433 (30%), Positives = 225/433 (51%), Gaps = 1/433 (0%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           K+ +A  L++ +      P       L+ GL ++ R+E+A  +L+ +V +G  PD +TY 
Sbjct: 1   KIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYT 60

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            ++ GL K  +   A  L  EM++ G   D + Y  ++R +   GK  QA   +K     
Sbjct: 61  SLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSH 120

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           GC P ++T + +I+ + K   I  A+ +   M   G +P+ V Y++L++  CK  K D A
Sbjct: 121 GCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCA 180

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + ++  +      P++ITYN L+  L   G  +A     D M EA   P V+TYNILI+G
Sbjct: 181 LEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISG 240

Query: 372 LCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
            CK G  D A +S  Q  + N C  DI TY  ++  L K   + EA+ L+  +  + C+P
Sbjct: 241 FCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTP 300

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            + TYN L++GL K G +E+A+ L  ++++NG +PD +T+ +LI G  +  +  EA  L 
Sbjct: 301 TIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLF 360

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           KE+  RG  +    Y  +I  L ++ K+  A  V + M S    PD    ST++  ++  
Sbjct: 361 KEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKA 420

Query: 551 GMTEEAYKLWQKL 563
           G    A ++++ +
Sbjct: 421 GRIGAAVRIFKSM 433



 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 234/483 (48%), Gaps = 36/483 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   C  G+L +A  L+  +      PD     +LI GL +  R  +A K+ + M
Sbjct: 23  TYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEM 82

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G   DT+ Y  ++  L + G+I  A ++   M+  GC PDV+T +T++  +   G+ 
Sbjct: 83  ALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRI 142

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+  +K    +G  P  + Y+ LI  +CK   +  A+E+L  M    C+PD +TYN L
Sbjct: 143 GAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVL 202

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL-------------HSLGSR----G 341
           ++  CK G  + A    + +L  G +P+  TYN L+             HSL       G
Sbjct: 203 IDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTING 262

Query: 342 C------------WDAVDK-------ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           C            W A +K       +++ +     +PT+ TYN L+NGLCK G ++ AI
Sbjct: 263 CTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAI 322

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           +   ++V   C PD+VTY +++  L KE    EA +L   +     +   + Y  LI  L
Sbjct: 323 DLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIREL 382

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            + G + +A  +Y  M  +G  PD +T  T+I G  +A ++  AV + K +  RG     
Sbjct: 383 LQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNE 442

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +IHGLCK++K+D A+++L  M  +   PD   ++ ++  +   G  E A   + +
Sbjct: 443 VVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDE 502

Query: 563 LIE 565
           ++E
Sbjct: 503 MLE 505



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 135/496 (27%), Positives = 241/496 (48%), Gaps = 22/496 (4%)

Query: 70  VNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCS 129
           ++ + +++ S E++ L     LRGL +                   D      +++    
Sbjct: 63  IDGLGKEKRSFEAYKLFKEMALRGLAL-------------------DTVCYTALIRELLQ 103

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
            GK+  AS +   M     +PD      +I GL +  RI  A ++ + M   G  P+ + 
Sbjct: 104 TGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVV 163

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y+ ++ GLCK  ++  A+ +L +M  + C PD ITYN ++  +  +G  + A  F+ + L
Sbjct: 164 YSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEML 223

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVL-DDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
             GC P + TY ILI   CK      A   L  +  I GC+ DI TY ++V++  K  K 
Sbjct: 224 EAGCKPDVYTYNILISGFCKAGNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKI 283

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNI 367
           ++AV ++  + + G  P   TYN LL+ L   G   +A+D +  I++    +P V TY  
Sbjct: 284 EEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGC-TPDVVTYTS 342

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LI+GL K      A   F +M  +    D V Y  ++  L + G + +A  +   +    
Sbjct: 343 LIDGLGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHG 402

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C P ++T +T+IDGL+K G +  A+ ++  M   G++P+++ +  LI G C+A +++ A+
Sbjct: 403 CVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCAL 462

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           ++L ++ K         Y ++I GLCKS  V+ A    + M+ +  KPD   ++ ++   
Sbjct: 463 EMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGF 522

Query: 548 ADDGMTEEAYKLWQKL 563
              G T+ A  ++  +
Sbjct: 523 CKAGNTDAACGVFDDM 538



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 221/451 (49%), Gaps = 1/451 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++      G++  A ++   M  R   P+      LI GL +  +++ A ++L
Sbjct: 125 DVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEML 184

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +   PDTITYN+++ GLCK G + +A A  DEM  +GC+PDV TYN ++      
Sbjct: 185 AQMKKAFCTPDTITYNVLIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKA 244

Query: 236 GKFKQAI-GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           G    A     ++    GC   + TYT +++ + K   I  A+ +++ +   GC+P I T
Sbjct: 245 GNTDAASHSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEAVALMEKITANGCTPTIAT 304

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N  CK G+ ++A+ ++  ++  G  P+ +TY +L+  LG         K+   M 
Sbjct: 305 YNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMA 364

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               +     Y  LI  L + G + +A + +  M S  C PD+VT +T++  L K G + 
Sbjct: 365 LRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIG 424

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A+++   +     +P  + Y+ LI GL K   M+ A+ +  QM +   +PD IT+  LI
Sbjct: 425 AAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILI 484

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C++  VE A     E+ + G K     Y ++I G CK+   D A  V + M SSR  
Sbjct: 485 DGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAGNTDAACGVFDDMSSSRCS 544

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +   +  ++  +       +A   +Q + E
Sbjct: 545 ANVVTYGALISGLCKRRQLTKASLYFQHMKE 575



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/351 (31%), Positives = 187/351 (53%), Gaps = 7/351 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP----DFHFCINLIRGLIRIDRIEKA 171
           D  T N ++  FC  G  TDA+     +A+   I     D H    ++  L +  +IE+A
Sbjct: 230 DVYTYNILISGFCKAGN-TDAAS--HSLAQETTINGCTIDIHTYTAIVDWLAKNKKIEEA 286

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +++ +  +G  P   TYN ++ GLCK G++  AI LL ++  +GC PDV+TY +++  
Sbjct: 287 VALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDG 346

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +    +  +A   +K+   +G     + YT LI ++ +   I +A  V   M   GC PD
Sbjct: 347 LGKEKRSFEAYKLFKEMALRGLALDTVCYTALIRELLQTGKIPQASSVYKTMTSHGCVPD 406

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VT +++++   K G+   AV +  ++ +RG+ PN + Y+ L+H L      D   ++L 
Sbjct: 407 VVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLA 466

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M +A  +P   TYNILI+GLCK G V+ A   F++M+   C+PD+ TYN ++   CK G
Sbjct: 467 QMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGFCKAG 526

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
             + A  +   ++ S CS  ++TY  LI GL K+  + KA + +  M E G
Sbjct: 527 NTDAACGVFDDMSSSRCSANVVTYGALISGLCKRRQLTKASLYFQHMKERG 577


>gi|262316879|emb|CAZ44328.1| restoring pentatricopeptide repeat protein homologue [Raphanus
           sativus]
          Length = 681

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 141/457 (30%), Positives = 230/457 (50%), Gaps = 16/457 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + +L   C   ++++A  L   M R N +        L+ GL R  R+ +A  +L
Sbjct: 146 DVVTFSTLLHGLCVEDRVSEALDLFHQMCRPNVVT----FTTLMNGLCREGRVVEAVALL 201

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFD 234
             MV  G  P+ ITY  +V G+CK G   SA+ LL +M  +S  +P+V+ Y+ I+  ++ 
Sbjct: 202 DRMVEDGLQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWK 261

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G+   A   + +   KG  P L TY  +I+  C     + A  +L +M     +P++VT
Sbjct: 262 DGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVT 321

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y++L+N   K+ K+ +A  + + +L RG+ PN+ITYN+++     +   DA + +  +M 
Sbjct: 322 YSALINAYVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMA 381

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               SP VFT+N LI+G C    +D      ++M       D  TYNT++   C  G LN
Sbjct: 382 TKGCSPDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLN 441

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-----------NGI 463
            AL L   +  S   P ++T NTL+DGL   G ++ A+ ++  M +           NG+
Sbjct: 442 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGV 501

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD  T+  LI G     +  EA +L KE+  RG       Y  +I+GLCK  ++D A Q
Sbjct: 502 EPDVQTYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQ 561

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           + + M S  + PD   F+T+V      G  ++  +L+
Sbjct: 562 MFDSMGSKSFSPDVVTFNTLVSGYCKAGRVDDGLELF 598



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 130/436 (29%), Positives = 212/436 (48%), Gaps = 12/436 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKA 171
           ++ ++ T   I+   C  G    A  L+  M   + I P+      +I GL +  R   A
Sbjct: 209 LQPNQITYGTIVDGMCKIGDTVSALNLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDA 268

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M   G  PD  TYN M+ G C  G+   A  LL EM      P+V+TY+ ++  
Sbjct: 269 HNLYTEMQEKGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINA 328

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
                KF +A   + + L +G  P  ITY  +I+  CKQ  +  A  +   MA +GCSPD
Sbjct: 329 YVKERKFFEAEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPD 388

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           + T+N+L++  C   + DD   +++ +   G+  ++ TYNTL+H     G  +A   +  
Sbjct: 389 VFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQ 448

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-----------CQPDIVTY 400
            M  +   P + T N L++GLC  G +  A+  F  M                +PD+ TY
Sbjct: 449 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTY 508

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N ++  L  EG   EA +L   +      P  ITY+++I+GL K+  +++A  ++  M  
Sbjct: 509 NILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGS 568

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
              SPD +T  TL+ G+C+A +V++ ++L  E+G+RG       Y  +IHG  K   ++ 
Sbjct: 569 KSFSPDVVTFNTLVSGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNING 628

Query: 521 AIQVLELMISSRYKPD 536
           A+ + + MISS   PD
Sbjct: 629 ALDIFQEMISSGVYPD 644



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 225/453 (49%), Gaps = 15/453 (3%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+   F     L DA  L   M R   +P       L+  ++R++R +    + Q M   
Sbjct: 47  KLRSGFHEIKGLEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERK 106

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
               D  ++N+++   C   ++  A++   +++  G +PDV+T++T+L  +    +  +A
Sbjct: 107 QIPCDVYSFNILIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEA 166

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +    D   + C P ++T+T L+  +C++  +  A+ +LD M  +G  P+ +TY ++V+ 
Sbjct: 167 L----DLFHQMCRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDG 222

Query: 302 SCKQGKYDDAVLVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            CK G   D V  +N  L R ME      PN + Y+ ++  L   G       +   M E
Sbjct: 223 MCKIG---DTVSALN--LLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQE 277

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P +FTYN +I+G C  G    A     +M+ +   P++VTY+ ++ A  KE    E
Sbjct: 278 KGIFPDLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFE 337

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +      P  ITYN++IDG  K+  ++ A  ++  M   G SPD  T  TLI 
Sbjct: 338 AEELYDEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLID 397

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+C A ++++  +LL E+ + G     + Y  +IHG C    ++ A+ + + MISS   P
Sbjct: 398 GYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCP 457

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           D    +T++  + D+G  ++A ++++ + + K+
Sbjct: 458 DIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 490



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 116/389 (29%), Positives = 196/389 (50%), Gaps = 11/389 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  FCS G+ ++A +L+  M  R   P+      LI   ++  +  +A ++ 
Sbjct: 283 DLFTYNCMIDGFCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELY 342

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G +P+TITYN M+ G CK+ ++ +A  +   M+  GC PDV T+NT++      
Sbjct: 343 DEMLPRGIIPNTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGA 402

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +         +    G      TY  LI   C    +  A+++   M   G  PDIVT 
Sbjct: 403 KRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTC 462

Query: 296 NSLVNFSCKQGKYDDAVLVINNL--------LSR---GMEPNSITYNTLLHSLGSRGCWD 344
           N+L++  C  GK  DA+ +   +         SR   G+EP+  TYN L+  L + G + 
Sbjct: 463 NTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQTYNILISGLINEGKFL 522

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
             +++   M      P   TY+ +INGLCK   +D A   F+ M SK+  PD+VT+NT++
Sbjct: 523 EAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLV 582

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
              CK G +++ L+L   +         ITY TLI G  K G +  A+ ++ +M+ +G+ 
Sbjct: 583 SGYCKAGRVDDGLELFCEMGRRGIVADAITYITLIHGFRKVGNINGALDIFQEMISSGVY 642

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           PD IT R+++      ++++ AV +L+++
Sbjct: 643 PDTITIRSMLTVLWSKEELKRAVAMLEDL 671



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 170/351 (48%), Gaps = 21/351 (5%)

Query: 90  KLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI 149
           K R     ++ +D  LP    P    +  T N ++  FC + +L  A  +  +MA +   
Sbjct: 331 KERKFFEAEELYDEMLPRGIIP----NTITYNSMIDGFCKQNRLDAAEHMFYVMATKGCS 386

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD      LI G     RI+  +++L  M  +G V DT TYN ++ G C  G + +A+ L
Sbjct: 387 PDVFTFNTLIDGYCGAKRIDDGTELLHEMTETGLVADTTTYNTLIHGFCLVGDLNAALDL 446

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK-----------GCPPYLI 258
             +M  SG  PD++T NT+L  + DNGK K A+  +K   +            G  P + 
Sbjct: 447 SQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASRPFNGVEPDVQ 506

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY ILI  +  +     A E+  +M   G  P+ +TY+S++N  CKQ + D+A  + +++
Sbjct: 507 TYNILISGLINEGKFLEAEELYKEMPHRGIVPNTITYSSMINGLCKQSRLDEATQMFDSM 566

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV---FTYNILINGLCKY 375
            S+   P+ +T+NTL+      G    VD  L++  E      V    TY  LI+G  K 
Sbjct: 567 GSKSFSPDVVTFNTLVSGYCKAG---RVDDGLELFCEMGRRGIVADAITYITLIHGFRKV 623

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           G ++ A++ F +M+S    PD +T  ++L  L  +  L  A+ +L  L  S
Sbjct: 624 GNINGALDIFQEMISSGVYPDTITIRSMLTVLWSKEELKRAVAMLEDLQMS 674



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 96/373 (25%), Positives = 174/373 (46%), Gaps = 5/373 (1%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +  AI L  +M  S   P VI +N ++  +    +    I  ++   RK  P  + ++ I
Sbjct: 58  LEDAIDLFSDMVRSRPLPSVIDFNKLMGVVVRMERPDLVISLYQKMERKQIPCDVYSFNI 117

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI+  C    +  A+     +   G  PD+VT+++L++  C + +  +A+    +L  + 
Sbjct: 118 LIKCFCSCSKLPFALSTFGKITKLGFQPDVVTFSTLLHGLCVEDRVSEAL----DLFHQM 173

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             PN +T+ TL++ L   G       +LD M E    P   TY  +++G+CK G    A+
Sbjct: 174 CRPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKIGDTVSAL 233

Query: 383 NSFNQMVS-KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           N   +M    + +P++V Y+ ++  L K+G  ++A  L   +      P L TYN +IDG
Sbjct: 234 NLLRKMEEMSHIKPNVVIYSAIIDGLWKDGRHSDAHNLYTEMQEKGIFPDLFTYNCMIDG 293

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
               G   +A  L  +M+E  I+P+ +T+  LI  + +  +  EA +L  E+  RG    
Sbjct: 294 FCSSGRWSEAQRLLQEMLERKINPNVVTYSALINAYVKERKFFEAEELYDEMLPRGIIPN 353

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y  +I G CK  ++D A  +  +M +    PD   F+T++         ++  +L  
Sbjct: 354 TITYNSMIDGFCKQNRLDAAEHMFYVMATKGCSPDVFTFNTLIDGYCGAKRIDDGTELLH 413

Query: 562 KLIEWKVFEKGTT 574
           ++ E  +    TT
Sbjct: 414 EMTETGLVADTTT 426


>gi|449444190|ref|XP_004139858.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449530677|ref|XP_004172320.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 839

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 224/417 (53%), Gaps = 1/417 (0%)

Query: 154 FCIN-LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
           F  N +I+ L    ++++A  ++  +   G  PDT TY  ++ G CK G +  A  + D 
Sbjct: 203 FTFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDR 262

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           M   GC+P+ +TY+ ++  +   G+ ++A+   ++ + KG  P +  YTI I  +C    
Sbjct: 263 MVKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGR 322

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
              A+++L  M   GC P++ TY +L++   + GK++ A+ V + +L+ G+ P ++TY+ 
Sbjct: 323 SCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSA 382

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L++ L   G ++    I + M      P   TYN++I G C  G + +A   F+QM+   
Sbjct: 383 LINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAG 442

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             P+++TYN ++    K+G +N A++LL ++ G+       TY  LI G ++ G +E A 
Sbjct: 443 PSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAF 502

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L+ +M+E+GISP+ +T+  +I G+    +V++A+ L  ++ + GN   +  Y ++I G 
Sbjct: 503 SLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGF 562

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            K+ ++  A      M+     P+   +++ +  +  +G T  A+K++ ++ +   F
Sbjct: 563 SKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYF 619



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 222/441 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C++GK+ +A  ++  +      PD     +LI G  +   ++ A ++   M
Sbjct: 204 TFNAMIKILCNKGKVQEAELIMGHIFHYGACPDTFTYTSLIIGHCKNGNLDLAFEMFDRM 263

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+++TY+ ++ GLC  G++  A+ +L+EM   G EP V  Y   + ++ D G+ 
Sbjct: 264 VKDGCDPNSVTYSALINGLCSEGRLEEAMDMLEEMIDKGIEPTVHAYTIPIVSLCDAGRS 323

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+       ++GC P + TYT LI  + +      AI V   M  +G  P  VTY++L
Sbjct: 324 CEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSAL 383

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N    +G+++ A+ +   +LS    PN+ TYN ++    S G       I D M +A  
Sbjct: 384 INQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGP 443

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP V TYNI+I+   K G ++ A+     M     + D  TY  ++    + G L  A  
Sbjct: 444 SPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFS 503

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L + +     SP ++TYN +I+G      ++ A+ L+ +M+E+G  P   T+  +I GF 
Sbjct: 504 LFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFS 563

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           + +++ EA +   ++ K+G       Y   I GLCK+ +  +A ++   M    Y P+  
Sbjct: 564 KTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLC 623

Query: 539 VFSTIVKKVADDGMTEEAYKL 559
            +S+++  +  +G  E+A +L
Sbjct: 624 TYSSLIDGLCQEGQAEDAERL 644



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/440 (27%), Positives = 226/440 (51%), Gaps = 4/440 (0%)

Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
           + C  G+  +A KL+  M +R   P+      LI GL R  + E A  V   M+  G VP
Sbjct: 316 SLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRDGKFEVAIGVYHKMLADGLVP 375

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
             +TY+ ++  L   G+  +A+ + + M      P+  TYN I++     G  ++A   +
Sbjct: 376 TAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIF 435

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
              L+ G  P +ITY I+I    KQ  +  A+ +L+ M   G   D  TY +L++   + 
Sbjct: 436 DQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRG 495

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           GK + A  + N ++  G+ PN +TYN +++   +    D    +   M E+ + P+  TY
Sbjct: 496 GKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTY 555

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N++I+G  K   +  A N   +MV +   P+++TY + +  LCK G  + A ++ H +  
Sbjct: 556 NMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKK 615

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P L TY++LIDGL ++G  E A     +++++G  P+  T+ TL+ G C   +  E
Sbjct: 616 RDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYE 671

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A  L++ + K+G +     YR ++ G CK+ +V+ A+++ + M+++ ++P  + +  ++ 
Sbjct: 672 ADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALIC 731

Query: 546 KVADDGMTEEAYKLWQKLIE 565
            +      ++A  ++Q +++
Sbjct: 732 ALCKANFRQKAQCMFQTMLK 751



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 214/448 (47%), Gaps = 4/448 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G L  A ++ D M +    P+      LI GL    R+E+A  +L
Sbjct: 236 DTFTYTSLIIGHCKNGNLDLAFEMFDRMVKDGCDPNSVTYSALINGLCSEGRLEEAMDML 295

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  P    Y + +  LC  G+   A+ LL +M   GC P+V TY  ++  +  +
Sbjct: 296 EEMIDKGIEPTVHAYTIPIVSLCDAGRSCEAVKLLGKMKKRGCGPNVQTYTALISGLSRD 355

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GKF+ AIG +   L  G  P  +TY+ LI Q+  +     A+ + + M      P+  TY
Sbjct: 356 GKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETY 415

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N ++   C  G    A  + + +L  G  PN ITYN ++H    +G  +   ++L++M  
Sbjct: 416 NVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKG 475

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                  +TY  LI+G  + G ++ A + FN+MV     P++VTYN ++        +++
Sbjct: 476 NGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDD 535

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL L   +  S   P   TYN +I G +K   + +A    G+M++ G+ P+ IT+ + I 
Sbjct: 536 ALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFID 595

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  +   A  +  E+ KR        Y  +I GLC+  + + A    E ++    +P
Sbjct: 596 GLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEP 651

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +   ++T+V+ +   G   EA +L + +
Sbjct: 652 NVDTYTTLVRGLCGKGRCYEADQLVESM 679



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 210/450 (46%), Gaps = 8/450 (1%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           GP V+    T   ++      GK   A  +   M     +P       LI  L    R E
Sbjct: 339 GPNVQ----TYTALISGLSRDGKFEVAIGVYHKMLADGLVPTAVTYSALINQLYVEGRFE 394

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A  + + M+    +P+T TYN+++ G C  G I+ A A+ D+M  +G  P+VITYN I+
Sbjct: 395 TALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIII 454

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
              F  G    A+   +     G      TY  LI    +   +  A  + ++M   G S
Sbjct: 455 HIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS 514

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++VTYN+++N      K DDA+ +   ++  G  P+S TYN ++            +  
Sbjct: 515 PNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMMISGFSKTNRISEAENF 574

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M +    P V TY   I+GLCK G    A   F++M  ++  P++ TY++++  LC+
Sbjct: 575 CGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQ 634

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           EG   +A +LL       C P + TY TL+ GL  KG   +A  L   M + G+ P +  
Sbjct: 635 EGQAEDAERLL----DDGCEPNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEI 690

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +R L+ G C+  +VE A+ +   +   G +   S Y+ +I  LCK+     A  + + M+
Sbjct: 691 YRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTML 750

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
              +  D+ V++ ++  +  +G T+ + +L
Sbjct: 751 KKHWNSDEVVWTVLLDGLLKEGETDLSLEL 780



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 196/412 (47%), Gaps = 4/412 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++      G+   A  + + M   + +P+      +I+G   I  I+KA+ +   M
Sbjct: 379 TYSALINQLYVEGRFETALTIFEWMLSHDSLPNTETYNVIIKGFCSIGYIQKATAIFDQM 438

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G  P+ ITYN+++    K+G + +A+ LL+ M  +G + D  TY  ++      GK 
Sbjct: 439 LKAGPSPNVITYNIIIHIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKL 498

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A   + + +  G  P ++TY  +I        +  A+ +   M   G  P   TYN +
Sbjct: 499 EHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALFWKMVESGNVPSSGTYNMM 558

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K  +  +A      ++ +G+ PN ITY + +  L   G      KI   M +  +
Sbjct: 559 ISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDY 618

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TY+ LI+GLC+ G  + A     +++   C+P++ TY T++  LC +G   EA Q
Sbjct: 619 FPNLCTYSSLIDGLCQEGQAEDA----ERLLDDGCEPNVDTYTTLVRGLCGKGRCYEADQ 674

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +      P    Y  L+ G  K   +E A+ ++  M+  G  P    ++ LI   C
Sbjct: 675 LVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALC 734

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           +A+  ++A  + + + K+        + +++ GL K  + D+++++L +M S
Sbjct: 735 KANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMES 786



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 183/398 (45%), Gaps = 16/398 (4%)

Query: 100 SHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI 159
           SHD SLP+++         T N I++ FCS G +  A+ + D M +    P+      +I
Sbjct: 405 SHD-SLPNTE---------TYNVIIKGFCSIGYIQKATAIFDQMLKAGPSPNVITYNIII 454

Query: 160 RGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE 219
               +   +  A ++L++M  +G   DT TY  ++ G  + G++  A +L +EM   G  
Sbjct: 455 HIYFKQGYMNNAMRLLEMMKGNGLKLDTWTYANLISGFSRGGKLEHAFSLFNEMVEHGIS 514

Query: 220 PDVITYNTILRTMFDNGKFKQAIG-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
           P+V+TYN I+       K   A+  FWK  +  G  P   TY ++I    K   I+ A  
Sbjct: 515 PNVVTYNAIINGYLTVAKVDDALALFWK-MVESGNVPSSGTYNMMISGFSKTNRISEAEN 573

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
               M  +G  P+++TY S ++  CK G+   A  + + +  R   PN  TY++L+  L 
Sbjct: 574 FCGKMVKQGLLPNVITYTSFIDGLCKNGRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLC 633

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
             G  +  +++LD   E    P V TY  L+ GLC  G    A      M  K  QP   
Sbjct: 634 QEGQAEDAERLLDDGCE----PNVDTYTTLVRGLCGKGRCYEADQLVESMKKKGLQPSEE 689

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
            Y  +L   CK   +  AL++   +  +   PCL  Y  LI  L K    +KA  ++  M
Sbjct: 690 IYRALLVGQCKNLEVESALKIFDSMVTTGFQPCLSDYKALICALCKANFRQKAQCMFQTM 749

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           ++   + D++    L+ G  +  + + +++LL  +  R
Sbjct: 750 LKKHWNSDEVVWTVLLDGLLKEGETDLSLELLHVMESR 787



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 96/332 (28%), Positives = 156/332 (46%), Gaps = 4/332 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  F   GKL  A  L + M      P+      +I G + + +++ A  + 
Sbjct: 481 DTWTYANLISGFSRGGKLEHAFSLFNEMVEHGISPNVVTYNAIINGYLTVAKVDDALALF 540

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV SG VP + TYNMM+ G  K  +I  A     +M   G  P+VITY + +  +  N
Sbjct: 541 WKMVESGNVPSSGTYNMMISGFSKTNRISEAENFCGKMVKQGLLPNVITYTSFIDGLCKN 600

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   A   + +  ++   P L TY+ LI+ +C++     A  +LDD    GC P++ TY
Sbjct: 601 GRTSLAFKIFHEMKKRDYFPNLCTYSSLIDGLCQEGQAEDAERLLDD----GCEPNVDTY 656

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +LV   C +G+  +A  ++ ++  +G++P+   Y  LL         ++  KI D M  
Sbjct: 657 TTLVRGLCGKGRCYEADQLVESMKKKGLQPSEEIYRALLVGQCKNLEVESALKIFDSMVT 716

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P +  Y  LI  LCK     +A   F  M+ K+   D V +  +L  L KEG  + 
Sbjct: 717 TGFQPCLSDYKALICALCKANFRQKAQCMFQTMLKKHWNSDEVVWTVLLDGLLKEGETDL 776

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           +L+LLH++   +C+    T   L   L+  GC
Sbjct: 777 SLELLHVMESRNCTLNFQTRVMLARELSALGC 808


>gi|359479250|ref|XP_002275790.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Vitis vinifera]
          Length = 746

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 230/452 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +    KL +  +   ++  +      + C +L+ GL+++  ++ A ++ Q +V SG
Sbjct: 190 LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSG 249

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T N+M+  LCK  +I +  + L +M   G  PDV+TYNT++      G  ++A 
Sbjct: 250 VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 309

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG  P + TY  +I  +CK     RA  VLD+M   G SPD  TYN L+   
Sbjct: 310 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 369

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+     DA  + + + S+G+ P+ ++++ L+  L   GC D   K    M  A  +P  
Sbjct: 370 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 429

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y ILI G C+ G++  A+   ++M+ + C  D+VTYNT+L  LCKE ML+EA +L   
Sbjct: 430 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 489

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   T+ TLI+G +K G M KA+ L+  M++  + PD +T+ TLI GFC+  +
Sbjct: 490 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 549

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E+  +L  ++  R     + +Y ++I+G C    V  A ++ + M+   ++      +T
Sbjct: 550 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 609

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           IVK     G   +A +    ++   +   G T
Sbjct: 610 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 641



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 234/457 (51%), Gaps = 14/457 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C +G L +A +L+D M+ +   P       +I GL +  +  +A  VL
Sbjct: 288 DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 347

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PDT TYN+++   C+   +  A  + DEM   G  PD+++++ ++  +  N
Sbjct: 348 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 407

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   QA+ +++D    G  P  + YTILI   C+   ++ A++V D+M  +GC  D+VTY
Sbjct: 408 GCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTY 467

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++N  CK+    +A  +   +  RG+ P+  T+ TL++     G  +    + ++M +
Sbjct: 468 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 527

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P V TYN LI+G CK   +++    +N M+S+   P+ ++Y  ++   C  G ++E
Sbjct: 528 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 587

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +        +IT NT++ G  + G   KA      M+  GI PD IT+ TLI 
Sbjct: 588 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 647

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSA-------YRLVIHGLCKSKKVDMAIQVLELM 528
           GF + + ++ A  L+       NKM NS        Y ++++G  +  ++  A  ++  M
Sbjct: 648 GFIKEENMDRAFALV-------NKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 700

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           I     PD + +++++         +EA+++  ++++
Sbjct: 701 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 737



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 201/406 (49%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I  L +  +IE     L  M   G  PD +TYN ++   C++G +  A  L+D MS  G
Sbjct: 260 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 319

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P V TYN I+  +   GK+ +A G   + L+ G  P   TY IL+ + C+   +  A 
Sbjct: 320 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 379

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + D+M  +G  PD+V++++L+    K G  D A+    ++ + G+ P+++ Y  L+   
Sbjct: 380 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 439

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      K+ D M E      V TYN ++NGLCK  ++  A   F +M  +   PD 
Sbjct: 440 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 499

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            T+ T++    K+G +N+A+ L  ++   +  P ++TYNTLIDG  K   MEK   L+  
Sbjct: 500 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 559

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+   I P+ I++  LI G+C    V EA  L  E+ ++G +        ++ G C++  
Sbjct: 560 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 619

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              A + L  M+     PD   ++T++     +   + A+ L  K+
Sbjct: 620 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 665



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 217/450 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   K+ +    +  M  +   PD      LI    R   +E+A +++  M
Sbjct: 256 TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 315

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P   TYN ++ GLCK G+   A  +LDEM   G  PD  TYN +L     N   
Sbjct: 316 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 375

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   + +   +G  P L++++ LI  + K   + +A++   DM   G +PD V Y  L
Sbjct: 376 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 435

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C+ G   +A+ V + +L +G   + +TYNT+L+ L         D++   M E   
Sbjct: 436 IGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 495

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  +T+  LING  K G +++A+  F  M+ +N +PD+VTYNT++   CK   + +  +
Sbjct: 496 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 555

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L + +      P  I+Y  LI+G    GC+ +A  L+ +M+E G     IT  T++ G+C
Sbjct: 556 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 615

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           RA    +A + L  +  +G       Y  +I+G  K + +D A  ++  M +S   PD  
Sbjct: 616 RAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 675

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            ++ I+   +  G  +EA  +  K+IE  V
Sbjct: 676 TYNVILNGFSRQGRMQEAELIMLKMIERGV 705



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 201/382 (52%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C    + DA ++ D M  +  +PD      LI  L +   +++A K  
Sbjct: 358 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 417

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +G  PD + Y +++GG C+ G +  A+ + DEM   GC  DV+TYNTIL  +   
Sbjct: 418 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 477

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A   + +   +G  P   T+T LI    K   + +A+ + + M      PD+VTY
Sbjct: 478 KMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTY 537

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK  + +    + N+++SR + PN I+Y  L++   + GC     ++ D M E
Sbjct: 538 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 597

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                T+ T N ++ G C+ G   +A    + M+ K   PD +TYNT++    KE  ++ 
Sbjct: 598 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 657

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L++ +  S   P +ITYN +++G +++G M++A ++  +M+E G++PD  T+ +LI 
Sbjct: 658 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 717

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G    + ++EA  +  E+ +RG
Sbjct: 718 GHVTQNNLKEAFRVHDEMLQRG 739



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 112/440 (25%), Positives = 215/440 (48%), Gaps = 2/440 (0%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
           +  L   S +I I+ R  ++PD    I  +     + R+E    ++      G  P  + 
Sbjct: 129 KHSLQSFSAMIHILVRSRRLPDAQAVILRMVRKSGVSRVEIVESLVLTYGNCGSNP--LV 186

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           ++++V    +  ++R        +   G    +   N++L  +   G    A   +++ +
Sbjct: 187 FDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVV 246

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R G    + T  I+I  +CK   I      L DM  +G  PD+VTYN+L+N  C+QG  +
Sbjct: 247 RSGVQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLE 306

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A  +++++  +G++P   TYN +++ L   G +     +LD M +   SP   TYNIL+
Sbjct: 307 EAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILL 366

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
              C+   +  A   F++M S+   PD+V+++ ++G L K G L++AL+    +  +  +
Sbjct: 367 VECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLA 426

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  + Y  LI G  + G M +A+ +  +M+E G   D +T+ T++ G C+   + EA +L
Sbjct: 427 PDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADEL 486

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             E+ +RG       +  +I+G  K   ++ A+ + E+MI    KPD   ++T++     
Sbjct: 487 FTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCK 546

Query: 550 DGMTEEAYKLWQKLIEWKVF 569
               E+  +LW  +I  +++
Sbjct: 547 GSEMEKVNELWNDMISRRIY 566



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 134/281 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N IL   C    L++A +L   M  R   PDF+    LI G  +   + KA  + 
Sbjct: 463 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 522

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M+     PD +TYN ++ G CK  ++     L ++M      P+ I+Y  ++    + 
Sbjct: 523 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 582

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   W + + KG    +IT   +++  C+     +A E L +M ++G  PD +TY
Sbjct: 583 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 642

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N   K+   D A  ++N + + G+ P+ ITYN +L+    +G     + I+  M E
Sbjct: 643 NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 702

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +P   TY  LING      +  A    ++M+ +   PD
Sbjct: 703 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 743


>gi|147742764|gb|ABQ50546.1| hypothetical protein [Brassica rapa]
          Length = 650

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 227/432 (52%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T N +L   C  G++ +A +L+D M     +PD      ++ GL   DR+ +A  
Sbjct: 157 EPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVD 216

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  M+ +G  P+  TY  ++  +CK G   SA+ LL +M     +P V+TY  I+  + 
Sbjct: 217 LIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLC 276

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +G+   A+ F+ +   KG    + TY  LI   C         ++L DM     +P++V
Sbjct: 277 KDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVV 336

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+++L++   K+GK  +A  + N +++RG+EPN+ITYN+L++ L +    D  ++++D+M
Sbjct: 337 TFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLM 396

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P ++TYNILING CK   VD  +  F +M  +    D VTY+T++   C+   L
Sbjct: 397 VSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKL 456

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             A ++   +      P ++TY  L+DGL   G +E+A+ +  QM +  +  D   +  +
Sbjct: 457 IVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNII 516

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C A++V++A  L   +  +G K    +Y +++ GLCK   +  A  +   M    Y
Sbjct: 517 IHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGY 576

Query: 534 KPDDTVFSTIVK 545
           +PD   ++T+++
Sbjct: 577 EPDGCTYNTLIR 588



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 137/479 (28%), Positives = 240/479 (50%), Gaps = 3/479 (0%)

Query: 90  KLRGLTITKKSHDPSLP---SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARR 146
           +L GL    K +D  L      +   +  D  T N ++  FC R KL  A   +  + + 
Sbjct: 95  RLFGLLARTKQYDLVLALCKQMELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKL 154

Query: 147 NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
              P+      L+ GL    R+ +A +++  MV+S  VPD IT N +V GLC + ++  A
Sbjct: 155 GYEPNTVTFNTLLNGLCLEGRVFEAVELVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEA 214

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           + L+  M  +GC+P+  TY  IL  M  +G    A+   +    +   P+++TYTI+I+ 
Sbjct: 215 VDLIARMMANGCQPNQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDN 274

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +CK   +  A+    +M  +G   ++ TYNSL+   C  G++DD   ++ ++++R + PN
Sbjct: 275 LCKDGRLDDALSFFSEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPN 334

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
            +T++ L+ SL   G       + + M      P   TYN LI GLC    +D A    +
Sbjct: 335 VVTFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMD 394

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            MVSK C PDI TYN ++   CK   +++ ++L   ++        +TY+TLI G  +  
Sbjct: 395 LMVSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSR 454

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +  A  ++ +M+  G+ P  +T+  L+ G C   ++EEA+ +L ++ K   ++    Y 
Sbjct: 455 KLIVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYN 514

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++IHG+C + KVD A  +   + S   K D   ++ ++  +       EA  L++K+ E
Sbjct: 515 IIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKE 573



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 213/408 (52%), Gaps = 1/408 (0%)

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
           GL+ I + + A  + Q M+ S  +P  I +N + G L +  Q    +AL  +M + G   
Sbjct: 65  GLVDIKK-DDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQMELKGIAY 123

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D+ T N ++       K   A        + G  P  +T+  L+  +C +  +  A+E++
Sbjct: 124 DLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELV 183

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           D M +    PD++T N++VN  C + +  +AV +I  +++ G +PN  TY  +L+ +   
Sbjct: 184 DCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKS 243

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G   +   +L  M      P V TY I+I+ LCK G +D A++ F++M +K  + ++ TY
Sbjct: 244 GNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTY 303

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N+++G+ C  G  ++  QLL  +     +P ++T++ LID L K+G + +A  LY +M+ 
Sbjct: 304 NSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMIT 363

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            GI P+ IT+ +LI+G C   +++EA  ++  +  +G       Y ++I+G CK+K+VD 
Sbjct: 364 RGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDD 423

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            +++   M       D   +ST+++          A K++Q+++   V
Sbjct: 424 GMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGV 471



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 215/440 (48%), Gaps = 6/440 (1%)

Query: 132 KLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           K  DA  L   M R   +P   DF+    L   L R  + +    + + M + G   D  
Sbjct: 70  KKDDAVALFQSMLRSRPLPTVIDFNRLFGL---LARTKQYDLVLALCKQMELKGIAYDLY 126

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T N+M+   C+R ++  A + + ++   G EP+ +T+NT+L  +   G+  +A+      
Sbjct: 127 TLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRVFEAVELVDCM 186

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +     P LIT   ++  +C +  ++ A++++  M   GC P+  TY  ++N  CK G  
Sbjct: 187 VLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGPILNRMCKSGNT 246

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             A+ ++  +  R ++P+ +TY  ++ +L   G  D        M        VFTYN L
Sbjct: 247 ASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKGIKANVFTYNSL 306

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I   C +G  D        M+++   P++VT++ ++ +L KEG L EA  L + +     
Sbjct: 307 IGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAKDLYNEMITRGI 366

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P  ITYN+LI GL     +++A  +   M+  G  PD  T+  LI GFC+A QV++ + 
Sbjct: 367 EPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGMR 426

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L +++  RG       Y  +I G C+S+K+ +A +V + M+S    P    ++ ++  + 
Sbjct: 427 LFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGLC 486

Query: 549 DDGMTEEAYKLWQKLIEWKV 568
           D+G  EEA  +  ++ + K+
Sbjct: 487 DNGELEEALGILDQMHKCKM 506



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 186/397 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T   IL   C  G    A  L+  M  R   P       +I  L +  R++ A    
Sbjct: 229 NQFTYGPILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFF 288

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G   +  TYN ++G  C  G+      LL +M      P+V+T++ ++ ++   
Sbjct: 289 SEMETKGIKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKE 348

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A   + + + +G  P  ITY  LI  +C    +  A +++D M  +GC PDI TY
Sbjct: 349 GKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTY 408

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK  + DD + +   +  RGM  +++TY+TL+             K+   M  
Sbjct: 409 NILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVS 468

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TY IL++GLC  G ++ A+   +QM     + DI  YN ++  +C    +++
Sbjct: 469 QGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNIIIHGMCNANKVDD 528

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   L        + +YN ++ GL K+  + +A  L+ +M E+G  PD  T+ TLI 
Sbjct: 529 AWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIR 588

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
              R + +  +V L++E+ + G     S  ++V+  L
Sbjct: 589 AHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML 625



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 98/376 (26%), Positives = 176/376 (46%), Gaps = 37/376 (9%)

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           +Y   LR+   + K   A+  ++  LR    P +I +  L   + +       + +   M
Sbjct: 57  SYKERLRSGLVDIKKDDAVALFQSMLRSRPLPTVIDFNRLFGLLARTKQYDLVLALCKQM 116

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-C 342
            ++G + D+ T N ++N  C++ K   A   +  +   G EPN++T+NTLL+ L   G  
Sbjct: 117 ELKGIAYDLYTLNIMINCFCRRRKLGFAFSAMGKIFKLGYEPNTVTFNTLLNGLCLEGRV 176

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           ++AV+ ++D M  + H P + T N ++NGLC    V  A++   +M++  CQP+  TY  
Sbjct: 177 FEAVE-LVDCMVLSQHVPDLITLNTIVNGLCLKDRVSEAVDLIARMMANGCQPNQFTYGP 235

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           +L  +CK G    AL LL  +      P ++TY  +ID L K G ++ A+  + +M   G
Sbjct: 236 ILNRMCKSGNTASALDLLRKMEHRKIKPHVVTYTIIIDNLCKDGRLDDALSFFSEMETKG 295

Query: 463 ISPDDITHRTLIWGFC-----------------------------------RADQVEEAV 487
           I  +  T+ +LI  FC                                   +  ++ EA 
Sbjct: 296 IKANVFTYNSLIGSFCSFGRWDDGAQLLRDMITRKITPNVVTFSALIDSLVKEGKLTEAK 355

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           DL  E+  RG +     Y  +I+GLC  K++D A Q+++LM+S    PD   ++ ++   
Sbjct: 356 DLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGF 415

Query: 548 ADDGMTEEAYKLWQKL 563
                 ++  +L++K+
Sbjct: 416 CKAKQVDDGMRLFRKM 431



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 85/307 (27%), Positives = 152/307 (49%), Gaps = 3/307 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++ +    GKLT+A  L + M  R   P+     +LI GL    R+++A++++ +M
Sbjct: 337 TFSALIDSLVKEGKLTEAKDLYNEMITRGIEPNTITYNSLIYGLCNDKRLDEANQMMDLM 396

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD  TYN+++ G CK  Q+   + L  +MS+ G   D +TY+T+++    + K 
Sbjct: 397 VSKGCDPDIWTYNILINGFCKAKQVDDGMRLFRKMSLRGMIADTVTYSTLIQGFCQSRKL 456

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   +++ + +G  P ++TY IL++ +C    +  A+ +LD M       DI  YN +
Sbjct: 457 IVAKKVFQEMVSQGVHPGIMTYAILLDGLCDNGELEEALGILDQMHKCKMELDIGIYNII 516

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C   K DDA  +  +L S+G++ +  +YN +L  L  R      D +   M E  +
Sbjct: 517 IHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEADALFRKMKEDGY 576

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TYN LI    +   +  ++    +M       D  T   V+  L   G L+++  
Sbjct: 577 EPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVMDML-SSGELDKS-- 633

Query: 419 LLHLLNG 425
            L++L+G
Sbjct: 634 FLNMLSG 640



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 60/226 (26%), Positives = 116/226 (51%), Gaps = 4/226 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T N ++   C+  +L +A++++D+M  +   PD      LI G  +  +++   
Sbjct: 366 IEPNTITYNSLIYGLCNDKRLDEANQMMDLMVSKGCDPDIWTYNILINGFCKAKQVDDGM 425

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + M + G + DT+TY+ ++ G C+  ++  A  +  EM   G  P ++TY  +L  +
Sbjct: 426 RLFRKMSLRGMIADTVTYSTLIQGFCQSRKLIVAKKVFQEMVSQGVHPGIMTYAILLDGL 485

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLI--TYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            DNG+ ++A+G   DQ+ K C   L    Y I+I  +C    +  A  +   +  +G   
Sbjct: 486 CDNGELEEALGIL-DQMHK-CKMELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKR 543

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           DI +YN +++  CK+    +A  +   +   G EP+  TYNTL+ +
Sbjct: 544 DIQSYNIMLSGLCKRSSLSEADALFRKMKEDGYEPDGCTYNTLIRA 589



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 29/130 (22%), Positives = 56/130 (43%), Gaps = 1/130 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    N I+   C+  K+ DA  L   +  +    D      ++ GL +   + +A 
Sbjct: 506 MELDIGIYNIIIHGMCNANKVDDAWSLFCSLPSKGVKRDIQSYNIMLSGLCKRSSLSEAD 565

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M   G  PD  TYN ++    +   I +++ L++EM   G   D  T   ++  M
Sbjct: 566 ALFRKMKEDGYEPDGCTYNTLIRAHLRGNDITTSVQLIEEMKRCGFSSDASTVKIVM-DM 624

Query: 233 FDNGKFKQAI 242
             +G+  ++ 
Sbjct: 625 LSSGELDKSF 634


>gi|41152686|dbj|BAD08211.1| hypothetical protein [Oryza sativa Indica Group]
 gi|67906118|dbj|BAE00069.1| PPR protein [Oryza sativa Indica Group]
          Length = 794

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 148/521 (28%), Positives = 255/521 (48%), Gaps = 41/521 (7%)

Query: 83  HVLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +V + N  L+GL    +S +      +   DG     D  +   ++  F   G L  A  
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
               M  R  +P+     ++I  L +   ++KA +VL  MV +G +P+  TYN +V G C
Sbjct: 221 TYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
             GQ + AI  L +M   G EPDV+TYN+++  +  NG+  +A   +    ++G  P + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 259 TY-----------------------------------TILIEQVCKQCGIARAIEVLDDM 283
           TY                                   +ILI    KQ  + +A+ V   M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             +G +PD VTY +++   CK G+ +DA+     ++   + P +I YN+L+HSL     W
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 344 D-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           D A + IL++++      T+F +N +I+  CK G V  +   F+ MV    +P+I+TY+T
Sbjct: 461 DKAKELILEMLDRGICLDTIF-FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYST 519

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C  G ++EA +LL  +      P  +TYNTLI+G  K   ME A+VL+ +M  +G
Sbjct: 520 LIDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSG 579

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +SPD IT+  ++ G  +  +   A +L   I + G ++  S Y +++HGLCK+   D A+
Sbjct: 580 VSPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEAL 639

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++ + +  +  + +   F+ ++  +   G  +EA  L+  L
Sbjct: 640 RMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 680



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 139/451 (30%), Positives = 232/451 (51%), Gaps = 17/451 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQ----IPD-FHFCINLIRGLIRIDRIEKASKVLQI 177
           +L+  C+  + +DA   +DI+ RR      IP+ F + I L++GL   +R ++A ++LQ+
Sbjct: 132 LLKGLCADKRTSDA---MDIVLRRMTQLGCIPNVFSYNI-LLKGLCDENRSQEALELLQM 187

Query: 178 MVMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           M   GG   PD ++Y  ++ G  K G +  A     EM   G  P+V+TYN+I+  +   
Sbjct: 188 MPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKA 247

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A+      ++ G  P   TY  ++   C       AI  L  M  +G  PD+VTY
Sbjct: 248 QAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTY 307

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NSL+++ CK G+  +A  + +++  RG++P   TY TLL    ++G    +  +LD+M  
Sbjct: 308 NSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVR 367

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P  + ++ILI    K G VD+A+  F++M  +   PD VTY TV+G LCK G + +
Sbjct: 368 NGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVED 427

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A++    +     SP  I YN+LI  L      +KA  L  +M++ GI  D I   ++I 
Sbjct: 428 AMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRGICLDTIFFNSIID 487

Query: 476 GFCRADQV---EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
             C+  +V   E+  DL+  IG + N +    Y  +I G C + K+D A ++L  M+S  
Sbjct: 488 SHCKEGRVIESEKLFDLMVRIGVKPNII---TYSTLIDGYCLAGKMDEATKLLASMVSVG 544

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            KPD   ++T++         E+A  L++++
Sbjct: 545 MKPDCVTYNTLINGYCKISRMEDALVLFREM 575



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 208/421 (49%), Gaps = 11/421 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + D + RR +    +    L   L  + R   A+ V +   M  +G     P+  T
Sbjct: 37  DARHVFDELLRRGRGASIY---GLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C  G++    A L  +   G   D I +  +L+ +  + +   A+     ++
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFSCKQG 306
            + GC P + +Y IL++ +C +     A+E+L  M  +G  C PD+V+Y +++N   K+G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             D A    + +L RG+ PN +TYN+++ +L      D   ++L  M +    P   TYN
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +++G C  G    AI    +M S   +PD+VTYN+++  LCK G   EA ++   +   
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P + TY TL+ G A KG + +   L   M+ NGI P+      LI  + +  +V++A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + +  ++ ++G       Y  VI  LCKS +V+ A++  E MI  R  P + V+++++  
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453

Query: 547 V 547
           +
Sbjct: 454 L 454



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 211/444 (47%), Gaps = 2/444 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE D  T N ++   C  G+ T+A K+ D M +R   P+      L++G      
Sbjct: 297 SDG--VEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGA 354

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  P+   +++++    K+G++  A+ +  +M   G  PD +TY T
Sbjct: 355 LVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGT 414

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G+ + A+ +++  + +   P  I Y  LI  +C      +A E++ +M   G
Sbjct: 415 VIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKWDKAKELILEMLDRG 474

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D + +NS+++  CK+G+  ++  + + ++  G++PN ITY+TL+      G  D   
Sbjct: 475 ICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTLIDGYCLAGKMDEAT 534

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P   TYN LING CK   ++ A+  F +M S    PDI+TYN +L  L
Sbjct: 535 KLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGVSPDIITYNIILQGL 594

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +      A +L   +  S     L TYN ++ GL K    ++A+ ++  +    +  + 
Sbjct: 595 FQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 654

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  + +EA DL   +   G       Y L+   L +   ++    +   
Sbjct: 655 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 714

Query: 528 MISSRYKPDDTVFSTIVKKVADDG 551
           M  +    +  + ++IV+K+   G
Sbjct: 715 MEENGCTANSRMLNSIVRKLLQRG 738



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/451 (25%), Positives = 208/451 (46%), Gaps = 51/451 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +LQ + ++G L +   L+D+M R    P+ +    LI    +  ++++A  V   M
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM--FD-- 234
              G  PDT+TY  ++G LCK G++  A+   ++M      P  I YN+++ ++  FD  
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 235 -------------------------------NGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                                           G+  ++   +   +R G  P +ITY+ L
Sbjct: 461 DKAKELILEMLDRGICLDTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPNIITYSTL 520

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+  C    +  A ++L  M   G  PD VTYN+L+N  CK  + +DA+++   + S G+
Sbjct: 521 IDGYCLAGKMDEATKLLASMVSVGMKPDCVTYNTLINGYCKISRMEDALVLFREMESSGV 580

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ ITYN +L  L       A  ++   + E+     + TYNI+++GLCK  L D A+ 
Sbjct: 581 SPDIITYNIILQGLFQTRRTAAAKELYVGITESGTQLELSTYNIILHGLCKNNLTDEALR 640

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F  +   + Q +  T+N ++GAL K G  +EA  L   L+ +   P + TY+ + + L 
Sbjct: 641 MFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLI 700

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           ++G +E+   L+  M ENG + +     +++                +++ +RG+  R  
Sbjct: 701 EQGLLEELDDLFLSMEENGCTANSRMLNSIV----------------RKLLQRGDITRAG 744

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            Y  +I     S +   A   L+L+   +Y+
Sbjct: 745 TYLFMIDEKHFSLEASTASLFLDLLSGGKYQ 775



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 76/306 (24%), Positives = 139/306 (45%), Gaps = 40/306 (13%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH--SPTVFTYN 366
           +DA  V + LL RG   +    N  L  +       AV +   +    +   +P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 367 ILINGLCKYGLVDRAINSFNQMVSK----------------------------------- 391
           ILI   C  G +D    +   ++ K                                   
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 392 -NCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLIDGLAKKGCM 448
             C P++ +YN +L  LC E    EAL+LL ++  +G  C P +++Y T+I+G  K+G +
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           +KA   Y +M++ GI P+ +T+ ++I   C+A  +++A+++L  + K G       Y  +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYNSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +HG C S +   AI  L+ M S   +PD   +++++  +  +G   EA K++  + +  +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGL 335

Query: 569 FEKGTT 574
             + TT
Sbjct: 336 KPEITT 341


>gi|297605196|ref|NP_001056837.2| Os06g0152500 [Oryza sativa Japonica Group]
 gi|255676726|dbj|BAF18751.2| Os06g0152500 [Oryza sativa Japonica Group]
          Length = 717

 Score =  229 bits (584), Expect = 3e-57,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 250/521 (47%), Gaps = 58/521 (11%)

Query: 102 DPSLPSSDGPF-------VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHF 154
           D SLPS+           V  +  T N +++  C+RG+L +A  ++  M      P+   
Sbjct: 130 DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVT 189

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEM 213
              L+    R   ++ A +V+ +M   G   P+ +T+N MV GLCK G++  A  + DEM
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              G  PDV++YNT+L      G   +++  + +  ++G  P ++T+T LI   CK   +
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL 309

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            +A+ ++  M   G   + VT+ +L++  CK+G  DDA+L +  +   G++P+ + YN L
Sbjct: 310 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 369

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           ++     G  D   +++  M      P V TY+ +I+G CK G +D A     +M+ K  
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD +TY++++  LC+E  LN+A +L   +      P   TY TLIDG  K+G +EKA+ 
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL----------------------- 490
           L+ +M+  G+ PD +T+  LI G  ++ + +EA  LL                       
Sbjct: 490 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549

Query: 491 --------------------KEIGK-------RGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
                               KE  K       R  K+  S Y ++IHG C+   V  A+ 
Sbjct: 550 KAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS 609

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             + M+ S + P+ T   ++V+ + ++GM  EA    Q L+
Sbjct: 610 FHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 235/458 (51%), Gaps = 18/458 (3%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           S   L  A + +  M R    P+ +    L+R L    R+E+A  V+  M  +G  P+ +
Sbjct: 129 SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAV 188

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           TYN +V   C+ G++  A  ++  M   G  +P+++T+N+++  +   G+ + A   + +
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            +R+G  P +++Y  L+   CK   +  ++ V  +M   G  PD+VT+ SL++ +CK G 
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            + AV ++  +  RG+  N +T+  L+     +G  D     ++ M +    P+V  YN 
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING CK G +D A     +M +K  +PD+VTY+T++   CK G L+ A QL   +    
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P  ITY++LI GL ++  +  A  L+  M++ G+ PD+ T+ TLI G C+   VE+A+
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS------ 541
            L  E+ ++G       Y ++I+GL KS +   A ++L  +      PD+  +       
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 548

Query: 542 ---------TIVKKVADDGMTEEAYKLWQKLIE--WKV 568
                     ++K     G+ +EA K++Q +++  WK+
Sbjct: 549 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 586



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 189/353 (53%), Gaps = 2/353 (0%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P V  YN +L  + D      A  F    LR G  P + TY IL+  +C +  +  A
Sbjct: 113 GYAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLH 335
           + V+ DM   GC+P+ VTYN+LV   C+ G+ D A  V++ +   G  +PN +T+N++++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L   G  +   K+ D M     +P V +YN L++G CK G +  ++  F++M  +   P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D+VT+ +++ A CK G L +A+ L+  +         +T+  LIDG  KKG ++ A++  
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M + GI P  + +  LI G+C+  +++ A +L++E+  +  K     Y  +I G CK 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +D A Q+ + M+     PD   +S++++ + ++    +A +L++ +++  V
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 180/324 (55%), Gaps = 2/324 (0%)

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P +  Y  ++  +     +  A   L  M   G +P++ TYN LV   C +G+ ++A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS-PTVFTYNILIN 370
           V V+ ++   G  PN++TYNTL+ +    G  D  ++++ +M E  ++ P + T+N ++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GLCK G ++ A   F++MV +   PD+V+YNT+L   CK G L+E+L +   +      P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            ++T+ +LI    K G +E+A+ L  QM E G+  +++T   LI GFC+   +++A+  +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +E+ K G +     Y  +I+G CK  ++D+A +++  M + R KPD   +STI+      
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 551 GMTEEAYKLWQKLIEWKVFEKGTT 574
           G  + A++L QK+++  V     T
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAIT 435



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/447 (23%), Positives = 205/447 (45%), Gaps = 25/447 (5%)

Query: 68  DRVNEVDQDEWSSESHVLAVNKKLRGLTIT------KKSHDPSLPSSDGPFVENDEKTNN 121
           +RV  + ++E +++ +++  N  + GL         +K  D  +     P    D  + N
Sbjct: 207 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP----DVVSYN 262

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
            +L  +C  G L ++  +   M +R  +PD     +LI    +   +E+A  ++  M   
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   + +T+  ++ G CK+G +  A+  ++EM   G +P V+ YN ++      G+   A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
               ++   K   P ++TY+ +I   CK   +  A ++   M  +G  PD +TY+SL+  
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C++ + +DA  +  N+L  G++P+  TY TL+      G  +    + D M      P 
Sbjct: 443 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 502

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN---------------TVLGA 406
           V TY++LINGL K      A     ++  ++  PD + Y+                +L  
Sbjct: 503 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 562

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            C +G++ EA ++   +   +       Y+ LI G  + G + KA+  + QM+ +G SP+
Sbjct: 563 FCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPN 622

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEI 493
             +  +L+ G      V EA + ++++
Sbjct: 623 STSTISLVRGLFEEGMVVEADNAIQDL 649



 Score = 77.0 bits (188), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 67/258 (25%), Positives = 105/258 (40%), Gaps = 50/258 (19%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T + I+  +C  G L  A +L   M ++  +PD     +LIRGL    R+  A 
Sbjct: 394 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 453

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL--- 229
           ++ + M+  G  PD  TY  ++ G CK G +  A++L DEM   G  PDV+TY+ ++   
Sbjct: 454 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 513

Query: 230 ----------RTMF---------DN------------GKFKQAIGFWKDQLRKGCPPYL- 257
                     R +F         DN             +FK  +   K    KG      
Sbjct: 514 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEAD 573

Query: 258 ---------------ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                            Y+ILI   C+   + +A+     M   G SP+  +  SLV   
Sbjct: 574 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 633

Query: 303 CKQGKYDDAVLVINNLLS 320
            ++G   +A   I +LL+
Sbjct: 634 FEEGMVVEADNAIQDLLT 651


>gi|15222409|ref|NP_176529.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205330|sp|Q9SH26.1|PP102_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g63400
 gi|6633845|gb|AAF19704.1|AC008047_11 F2K11.22 [Arabidopsis thaliana]
 gi|332195974|gb|AEE34095.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 577

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 236/447 (52%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC R +++ A  L+  M +    P      +L+ G     RI  A  ++  M
Sbjct: 122 TYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDAVALVDQM 181

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PDTIT+  ++ GL    +   A+AL+D M   GC+P+++TY  ++  +   G  
Sbjct: 182 VEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNGLCKRGDI 241

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A               ++ Y+ +I+ +CK      A+ +  +M  +G  P+++TY+SL
Sbjct: 242 DLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSL 301

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C   ++ DA  ++++++ R + PN +T+N L+ +    G     +K+ D M + S 
Sbjct: 302 ISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYDEMIKRSI 361

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +FTY+ LING C +  +D A + F  M+SK+C P++VTYNT++   CK   ++E ++
Sbjct: 362 DPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAKRIDEGVE 421

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   ++        +TY TLI G  +    + A +++ QM+ +G+ P+ +T+ TL+ G C
Sbjct: 422 LFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYNTLLDGLC 481

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  ++E+A+ + + + +   +     Y ++I G+CK+ KV+    +   +     KPD  
Sbjct: 482 KNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWDLFCSLSLKGVKPDVI 541

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +++T++      G+ EEA  L++K+ E
Sbjct: 542 IYNTMISGFCRKGLKEEADALFRKMRE 568



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 122/418 (29%), Positives = 210/418 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +L  +C   +++DA  L+D M      PD      LI GL   ++  +A  ++  M
Sbjct: 157 TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 216

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+ +TY ++V GLCKRG I  A  LL++M  +  E +V+ Y+T++ ++      
Sbjct: 217 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHE 276

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+  + +   KG  P +ITY+ LI  +C     + A  +L DM     +P++VT+N+L
Sbjct: 277 DDALNLFTEMENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNAL 336

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK  +A  + + ++ R ++P+  TY++L++        D    + ++M     
Sbjct: 337 IDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDC 396

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TYN LING CK   +D  +  F +M  +    + VTY T++    +    + A  
Sbjct: 397 FPNVVTYNTLINGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQM 456

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +      P ++TYNTL+DGL K G +EKAMV++  +  + + P   T+  +I G C
Sbjct: 457 VFKQMVSDGVHPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMC 516

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +A +VE+  DL   +  +G K     Y  +I G C+    + A  +   M      PD
Sbjct: 517 KAGKVEDGWDLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPD 574



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 224/447 (50%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +IL+N     KL DA  L   M +   +P       L+  + ++ + +    + + M   
Sbjct: 55  EILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQRL 114

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   +  TYN+++   C+R QI  A+ALL +M   G EP ++T +++L       +   A
Sbjct: 115 GISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKRISDA 174

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +      +  G  P  IT+T LI  +      + A+ ++D M   GC P++VTY  +VN 
Sbjct: 175 VALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGVVVNG 234

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK+G  D A  ++N + +  +E N + Y+T++ SL      D    +   M      P 
Sbjct: 235 LCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPN 294

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TY+ LI+ LC Y     A    + M+ +   P++VT+N ++ A  KEG L EA +L  
Sbjct: 295 VITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAEKLYD 354

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +   S  P + TY++LI+G      +++A  ++  M+     P+ +T+ TLI GFC+A 
Sbjct: 355 EMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTLINGFCKAK 414

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +++E V+L +E+ +RG       Y  +IHG  +++  D A  V + M+S    P+   ++
Sbjct: 415 RIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPNIMTYN 474

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKV 568
           T++  +  +G  E+A  +++ L   K+
Sbjct: 475 TLLDGLCKNGKLEKAMVVFEYLQRSKM 501



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/352 (28%), Positives = 174/352 (49%), Gaps = 2/352 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C RG +  A  L++ M       +      +I  L +    + A  +   M
Sbjct: 227 TYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEM 286

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ ITY+ ++  LC   +   A  LL +M      P+V+T+N ++      GK 
Sbjct: 287 ENKGVRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKL 346

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   + + +++   P + TY+ LI   C    +  A  + + M  + C P++VTYN+L
Sbjct: 347 VEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYNTL 406

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEAS 357
           +N  CK  + D+ V +   +  RG+  N++TY TL+H    +R C +A      ++++  
Sbjct: 407 INGFCKAKRIDEGVELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGV 466

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
           H P + TYN L++GLCK G +++A+  F  +     +P I TYN ++  +CK G + +  
Sbjct: 467 H-PNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGW 525

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            L   L+     P +I YNT+I G  +KG  E+A  L+ +M E+G  PD  T
Sbjct: 526 DLFCSLSLKGVKPDVIIYNTMISGFCRKGLKEEADALFRKMREDGPLPDSGT 577



 Score =  140 bits (352), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 93/352 (26%), Positives = 170/352 (48%), Gaps = 4/352 (1%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  ILR    + K   AIG +   ++    P +  +  L+  + K       I + + M 
Sbjct: 53  YREILRNGLHSMKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLGEKMQ 112

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSRGC 342
             G S ++ TYN L+N  C++ +   A+ ++  ++  G EP+ +T ++LL+    G R  
Sbjct: 113 RLGISHNLYTYNILINCFCRRSQISLALALLGKMMKLGYEPSIVTLSSLLNGYCHGKR-I 171

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            DAV  ++D M E  + P   T+  LI+GL  +     A+   ++MV + CQP++VTY  
Sbjct: 172 SDAV-ALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQRGCQPNLVTYGV 230

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           V+  LCK G ++ A  LL+ +  +     ++ Y+T+ID L K    + A+ L+ +M   G
Sbjct: 231 VVNGLCKRGDIDLAFNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKG 290

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + P+ IT+ +LI   C  ++  +A  LL ++ +R        +  +I    K  K+  A 
Sbjct: 291 VRPNVITYSSLISCLCNYERWSDASRLLSDMIERKINPNVVTFNALIDAFVKEGKLVEAE 350

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           ++ + MI     PD   +S+++         +EA  +++ +I    F    T
Sbjct: 351 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVT 402


>gi|357505881|ref|XP_003623229.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498244|gb|AES79447.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 770

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 131/438 (29%), Positives = 222/438 (50%), Gaps = 2/438 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L+ FC  G    A  L  +M R   IPD      +I GL +  R+ +A ++ + M  
Sbjct: 133 NLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGKRLVEAKELFKEMKG 192

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P+++T++ ++ G CK G +     LL+EM   G E DV  Y+ ++      G  ++
Sbjct: 193 GECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIER 252

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               + + LRK   P ++TY+ L+  +CK+     A ++LD M      PD+V Y  L +
Sbjct: 253 GKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLAD 312

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G+  DA+ V++ ++ RG EPN++TYN +++ L   G  D    IL+ M +    P
Sbjct: 313 GLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKP 372

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSK--NCQPDIVTYNTVLGALCKEGMLNEALQ 418
            V TY+ L+ GLC  G +D A++  N ++SK  + +PD+  +N V+  LCK+  L  A +
Sbjct: 373 DVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKR 432

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           + + +        ++TYN LIDG    G + KA+ L+   +++GISP+  T+  LI G C
Sbjct: 433 VYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLC 492

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +   +  A  L  +    G +   S Y  ++  LC+   V+ A  + + M ++ + PD  
Sbjct: 493 KMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVV 552

Query: 539 VFSTIVKKVADDGMTEEA 556
            F+ I+      G  E A
Sbjct: 553 SFNIIIDGTLKAGDVESA 570



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 222/424 (52%), Gaps = 3/424 (0%)

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           IM R   +  ++F + L++G  +     KA  +  +M  +  +PD ++YN ++ GLCK  
Sbjct: 120 IMKRGFHLNVYNFNL-LLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLCKGK 178

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++  A  L  EM    C+P+ +T++ ++     NG  ++  G  ++  + G    +  Y+
Sbjct: 179 RLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYS 238

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            LI   C +  I R  E+ ++M  +  +P++VTY+ L+N  CK+ K+ +A  +++ +   
Sbjct: 239 ALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGC 298

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            + P+ + Y  L   L   G      K+LD+M +    P   TYN +INGLCK G VD A
Sbjct: 299 KVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDA 358

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS--CSPCLITYNTLI 439
           +     M  K  +PD+VTY+T++  LC  G ++EA+ LL+LL        P +  +N +I
Sbjct: 359 LGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVI 418

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
             L K+  +  A  +Y  M+E G   + +T+  LI G+  A ++ +A++L K+    G  
Sbjct: 419 QELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGIS 478

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
              + Y ++I+GLCK + + +A  +     +S  +P  + ++T++  +  +   E+A  L
Sbjct: 479 PNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNL 538

Query: 560 WQKL 563
           +Q++
Sbjct: 539 FQEM 542



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 222/452 (49%), Gaps = 2/452 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC  G + +   L++ M +     D      LI G      IE+  ++   M
Sbjct: 201 TFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVFVYSALISGFCSKGDIERGKELFNEM 260

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +     P+ +TY+ ++  LCK+ + + A  +LD M+     PDV+ Y  +   +  NG+ 
Sbjct: 261 LRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRA 320

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI      +++G  P  +TY  +I  +CK+  +  A+ +L+ MA +G  PD+VTY++L
Sbjct: 321 SDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTL 380

Query: 299 VNFSCKQGKYDDAVLVINNLLSR--GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           V   C  GK D+AV ++N L+S+   ++P+   +N ++  L  +       ++   M E 
Sbjct: 381 VKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVER 440

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
                + TYNILI+G    G + +A+  +   V     P+  TY  ++  LCK  ML+ A
Sbjct: 441 GFPSNIVTYNILIDGYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIA 500

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             L +    S   P +  YNTL+  L ++  +E+A  L+ +M      PD ++   +I G
Sbjct: 501 KGLFNKKRASGTRPTVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDG 560

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             +A  VE A +LL E+        N  + ++I+   K  ++D A  + E M+S  + PD
Sbjct: 561 TLKAGDVESAKELLLEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPD 620

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +F +++K  +  G TE+   + Q++ +  V
Sbjct: 621 AVLFDSLLKGYSLKGKTEKVVSMLQQMADKDV 652



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/401 (28%), Positives = 205/401 (51%), Gaps = 3/401 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C + K  +A++++D M      PD      L  GL +  R   A KVL +MV  G
Sbjct: 275 LMNALCKKQKWKEAAQMLDTMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRG 334

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TYN ++ GLCK G++  A+ +L+ M+  G +PDV+TY+T+++ +   GK  +A+
Sbjct: 335 EEPNNVTYNAIINGLCKEGRVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAV 394

Query: 243 GFWKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                 + K     P +  + ++I+++CKQ  +  A  V   M   G   +IVTYN L++
Sbjct: 395 DLLNLLMSKEFHIKPDVFAFNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILID 454

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                GK   A+ +  + +  G+ PN+ TY  L++ L           + +    +   P
Sbjct: 455 GYLSAGKLTKALELWKDAVDSGISPNAATYTVLINGLCKMQMLSIAKGLFNKKRASGTRP 514

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           TV  YN L+  LC+   V++A N F +M + N  PD+V++N ++    K G +  A +LL
Sbjct: 515 TVSEYNTLMASLCRESSVEQARNLFQEMRNANHDPDVVSFNIIIDGTLKAGDVESAKELL 574

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +   +  P  IT++ LI+   K G +++A  LY +M+  G  PD +   +L+ G+   
Sbjct: 575 LEMLNMNLVPDNITFSILINRFLKLGQLDEAASLYERMVSCGHVPDAVLFDSLLKGYSLK 634

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-SKKVDM 520
            + E+ V +L+++  +   + +     ++  LC  SK VD+
Sbjct: 635 GKTEKVVSMLQQMADKDVVLDSKLTSTILACLCNMSKDVDI 675



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 97/384 (25%), Positives = 195/384 (50%), Gaps = 2/384 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           +P   + N ++  L K       I++  +M+     P   + + ++ +  +  K   A G
Sbjct: 56  IPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFAFG 115

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
                +++G    +  + +L++  C+     +A+++   M      PD V+YN+++N  C
Sbjct: 116 VLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVINGLC 175

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K  +  +A  +   +     +PNS+T++ L+      G  +    +L+ M +      VF
Sbjct: 176 KGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGDVF 235

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
            Y+ LI+G C  G ++R    FN+M+ KN  P++VTY+ ++ ALCK+    EA Q+L  +
Sbjct: 236 VYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLDTM 295

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
            G    P ++ Y  L DGL+K G    A+ +   M++ G  P+++T+  +I G C+  +V
Sbjct: 296 TGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEGRV 355

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY--KPDDTVFS 541
           ++A+ +L+ + K+G K     Y  ++ GLC   K+D A+ +L L++S  +  KPD   F+
Sbjct: 356 DDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFAFN 415

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            +++++        A +++  ++E
Sbjct: 416 LVIQELCKQRRLRHAKRVYYTMVE 439



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/430 (23%), Positives = 199/430 (46%), Gaps = 2/430 (0%)

Query: 147 NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
           N IP +  C  LI  L +    +    V   M      P   + + ++       +   A
Sbjct: 54  NSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSFA 113

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
             +L  +   G   +V  +N +L+    +G   +A+  +    R    P  ++Y  +I  
Sbjct: 114 FGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVING 173

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +CK   +  A E+  +M    C P+ VT+++L++  CK G  ++   ++  +   G+E +
Sbjct: 174 LCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEGD 233

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
              Y+ L+    S+G  +   ++ + M   + +P V TY+ L+N LCK      A    +
Sbjct: 234 VFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQMLD 293

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M     +PD+V Y  +   L K G  ++A+++L L+      P  +TYN +I+GL K+G
Sbjct: 294 TMTGCKVRPDVVAYTVLADGLSKNGRASDAIKVLDLMVKRGEEPNNVTYNAIINGLCKEG 353

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--A 504
            ++ A+ +   M + G  PD +T+ TL+ G C   +++EAVDLL  +  +   ++    A
Sbjct: 354 RVDDALGILETMAKKGKKPDVVTYSTLVKGLCGVGKIDEAVDLLNLLMSKEFHIKPDVFA 413

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + LVI  LCK +++  A +V   M+   +  +   ++ ++      G   +A +LW+  +
Sbjct: 414 FNLVIQELCKQRRLRHAKRVYYTMVERGFPSNIVTYNILIDGYLSAGKLTKALELWKDAV 473

Query: 565 EWKVFEKGTT 574
           +  +     T
Sbjct: 474 DSGISPNAAT 483



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 109/248 (43%), Gaps = 4/248 (1%)

Query: 325 PNSI----TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           PNSI    + NTL+ +L     +D V  +   M   S  P   + + LI           
Sbjct: 53  PNSIPSYSSCNTLIDNLRKAKHYDHVISVHSKMASVSVFPCFTSLSALIESFVNTQKPSF 112

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A      ++ +    ++  +N +L   C+ G  ++A+ L  ++  +   P  ++YNT+I+
Sbjct: 113 AFGVLGLIMKRGFHLNVYNFNLLLKGFCQSGDSHKAMDLFCMMKRNCLIPDCVSYNTVIN 172

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL K   + +A  L+ +M      P+ +T   LI GFC+   VEE   LL+E+ K G + 
Sbjct: 173 GLCKGKRLVEAKELFKEMKGGECKPNSVTFSALIDGFCKNGDVEEGFGLLEEMEKMGLEG 232

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  +I G C    ++   ++   M+     P+   +S ++  +      +EA ++ 
Sbjct: 233 DVFVYSALISGFCSKGDIERGKELFNEMLRKNVTPNVVTYSCLMNALCKKQKWKEAAQML 292

Query: 561 QKLIEWKV 568
             +   KV
Sbjct: 293 DTMTGCKV 300


>gi|302757525|ref|XP_002962186.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
 gi|300170845|gb|EFJ37446.1| hypothetical protein SELMODRAFT_76934 [Selaginella moellendorffii]
          Length = 855

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 226/445 (50%), Gaps = 6/445 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G++ D  KL+  M   +  PD      L+ G  R +R++ A ++ +++  
Sbjct: 268 NSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELFKLLSS 327

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+  TY  ++ GL    ++  A A  DE        DVI+Y T+++ + D+ +  +
Sbjct: 328 YGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADSKRIDE 381

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   ++     GC P ++ YT +I+ + K   I   ++  +DM+   C P   TY  +++
Sbjct: 382 ACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVID 441

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK     DA  V   ++ +G  P++ITY TL+         D   K+LD+M      P
Sbjct: 442 GLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEP 501

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           T  TY  +++G CK  +++ A     QM  + C+P +  + ++L     +G   EA Q+L
Sbjct: 502 TAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVL 561

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C+P +I Y +LID L   G + +A  ++  M+E G +PD +T+ T+I  F + 
Sbjct: 562 TEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKI 621

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             VE A ++L+ + K G      AY  ++ G  K ++VD A  V + M++S  KP+   F
Sbjct: 622 GNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTF 681

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           + ++  +  DG T+ A+ L+++++E
Sbjct: 682 NVLMHGLFKDGKTDRAFSLFKEMLE 706



 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 223/452 (49%), Gaps = 1/452 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++      G++ D  K  + M+  + +P       +I GL +   +  A KV + MV  G
Sbjct: 404 VIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 463

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPDTITY  ++ G  K  ++  A  LLD M   G EP  +TY +I+          +A 
Sbjct: 464 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 523

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   +GC P L  +T L+     +     A +VL +M   GC+PD++ Y SL++  
Sbjct: 524 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 583

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
              G+  +A  V ++++ +G  P+++TY T++ +    G  +A  +IL++M ++   P  
Sbjct: 584 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 643

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-H 421
           F YN L++G  K   VD+A   +++MV+   +P+ VT+N ++  L K+G  + A  L   
Sbjct: 644 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 703

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           +L      P L++Y  LIDGL K G + +A   + +M++ GI P+  T+ +LI+   +A 
Sbjct: 704 MLEKDEVPPTLVSYTILIDGLGKAGRVSEAFSQFQEMIDRGIIPECHTYTSLIYSLAKAG 763

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ EA  L++++ K G      AY  +I GL  S  VD A  V + M+     P++  + 
Sbjct: 764 RIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYK 823

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
            + +     G   +   + Q   +    E G+
Sbjct: 824 VLRRGFRAAGRALDLEAVKQHFSQGVAMEAGS 855



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 199/407 (48%), Gaps = 39/407 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C    L DA K+ + M ++  +PD      LI G  +  ++++A K+L +M
Sbjct: 435 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 494

Query: 179 VMSGGVPDTITYNMMVGGLCK-----------------------------------RGQI 203
           +  G  P  +TY  +V G CK                                   +G+ 
Sbjct: 495 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 554

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A  +L EM+  GC PDVI Y +++  +F  G+  +A   +   + KGC P  +TY  +
Sbjct: 555 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 614

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+   K   +  A E+L+ MA  G  PD   YNSL++   K  + D A  V + +++ G+
Sbjct: 615 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 674

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH-SPTVFTYNILINGLCKYGLVDRAI 382
           +PN++T+N L+H L   G  D    +   M E     PT+ +Y ILI+GL K G V  A 
Sbjct: 675 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKDEVPPTLVSYTILIDGLGKAGRVSEAF 734

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           + F +M+ +   P+  TY +++ +L K G + EA +L+  +     +P +  Y+ LI GL
Sbjct: 735 SQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 794

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
                ++ A  ++ +MM+ G +P+++T++ L  GF  A +   A+DL
Sbjct: 795 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR---ALDL 838



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 213/445 (47%), Gaps = 7/445 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L   C   K+  A +L   M      P       +I GL  ID++++A K    M+ 
Sbjct: 24  NIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNTVISGLASIDKMDEAYKFFNSMID 83

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PD I +  ++ G CK GQ +    LL++ ++    PDV  Y +++      G    
Sbjct: 84  NGCEPDVIAFTTLIHGFCKAGQPQVGHMLLNQ-ALKRFRPDVFLYTSVIHGYCKAGDLDT 142

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                ++ L  GC P    Y +LI+ +CK   +  A E+ + M   GC  D VT+ +L+ 
Sbjct: 143 GFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTFMTLIE 202

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                GK D+A  +   ++ RG EP     ++L+ +L   G  D  ++I   +     + 
Sbjct: 203 ALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVAKKVAT 262

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +   YN L++G CK G VD  +    QMV  +  PDI TYN ++    +   L++AL+L 
Sbjct: 263 SRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDIQTYNILVAGFSRANRLDDALELF 322

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            LL+   C P   TY T+I GL     ME+A   + + +      D I++ T+I G   +
Sbjct: 323 KLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDEAL------DVISYTTVIKGLADS 376

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +++EA +L +++   G      AY  VI GL K+ +++  ++  E M  S   P  T +
Sbjct: 377 KRIDEACELFEKLKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEDMSGSSCVPTRTTY 436

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           + ++  +    M  +A K+++++++
Sbjct: 437 TVVIDGLCKAQMLPDACKVFEQMVQ 461



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 208/396 (52%), Gaps = 7/396 (1%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +E+A   L+ M  +G +PD +  N+++ GLCK  +I  AI L  EM   GCEP +++YNT
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAIELFLEMPSMGCEPTIVSYNT 60

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +    K  +A  F+   +  GC P +I +T LI   CK  G  +   +L + A++ 
Sbjct: 61  VISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCK-AGQPQVGHMLLNQALKR 119

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD+  Y S+++  CK G  D    ++  +L+ G  P++  Y  L+  L   G  D   
Sbjct: 120 FRPDVFLYTSVIHGYCKAGDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAY 179

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++ + M ++       T+  LI  L  +G +D A   + +M+ +  +P +   ++++ AL
Sbjct: 180 ELFERMRKSGCLGDYVTFMTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFAL 239

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CK G ++EA ++   +     +   + YN+L+DG  K G ++  + L  QM+E    PD 
Sbjct: 240 CKAGKVDEANEIYQTVVAKKVATSRVAYNSLMDGYCKLGRVDDGLKLLLQMVECDNFPDI 299

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T+  L+ GF RA+++++A++L K +   G K   + Y  +I GL  +++++ A    + 
Sbjct: 300 QTYNILVAGFSRANRLDDALELFKLLSSYGCKPNAATYTTIIQGLYDAQRMEEAKAFFDE 359

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +      D   ++T++K +AD    +EA +L++KL
Sbjct: 360 AL------DVISYTTVIKGLADSKRIDEACELFEKL 389



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 76/303 (25%), Positives = 131/303 (43%), Gaps = 50/303 (16%)

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           +  A++ L +M   G  PD+V  N ++N  CK  K D A+                    
Sbjct: 1   MEEALDCLKEMHTTGLMPDVVNCNIVLNGLCKARKIDKAI-------------------E 41

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L   + S GC                 PT+ +YN +I+GL     +D A   FN M+   
Sbjct: 42  LFLEMPSMGC----------------EPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNG 85

Query: 393 CQPDIVTYNTVLGALCKEG-------MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           C+PD++ + T++   CK G       +LN+AL+           P +  Y ++I G  K 
Sbjct: 86  CEPDVIAFTTLIHGFCKAGQPQVGHMLLNQALKRFR--------PDVFLYTSVIHGYCKA 137

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G ++    +  +M+  G  PD   +  LI   C+  +V+EA +L + + K G       +
Sbjct: 138 GDLDTGFKILEEMLAAGCIPDAAAYFVLIDPLCKLGRVDEAYELFERMRKSGCLGDYVTF 197

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I  L    K+D A ++   MI   Y+P   V  +++  +   G  +EA +++Q ++ 
Sbjct: 198 MTLIEALSNHGKLDEACELYREMIERGYEPYLEVQDSLIFALCKAGKVDEANEIYQTVVA 257

Query: 566 WKV 568
            KV
Sbjct: 258 KKV 260


>gi|296083846|emb|CBI24234.3| unnamed protein product [Vitis vinifera]
          Length = 589

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 230/452 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +    KL +  +   ++  +      + C +L+ GL+++  ++ A ++ Q +V SG
Sbjct: 33  LVRTYVQARKLREGCEAFRVLKSKGLCVSINACNSLLGGLVKVGWVDLAWEIYQEVVRSG 92

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T N+M+  LCK  +I +  + L +M   G  PDV+TYNT++      G  ++A 
Sbjct: 93  VQVNVYTLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAF 152

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG  P + TY  +I  +CK     RA  VLD+M   G SPD  TYN L+   
Sbjct: 153 ELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVEC 212

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+     DA  + + + S+G+ P+ ++++ L+  L   GC D   K    M  A  +P  
Sbjct: 213 CRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDN 272

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y ILI G C+ G++  A+   ++M+ + C  D+VTYNT+L  LCKE ML+EA +L   
Sbjct: 273 VIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTE 332

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   T+ TLI+G +K G M KA+ L+  M++  + PD +T+ TLI GFC+  +
Sbjct: 333 MTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSE 392

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E+  +L  ++  R     + +Y ++I+G C    V  A ++ + M+   ++      +T
Sbjct: 393 MEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNT 452

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           IVK     G   +A +    ++   +   G T
Sbjct: 453 IVKGYCRAGNAVKADEFLSNMLLKGIVPDGIT 484



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 234/457 (51%), Gaps = 14/457 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C +G L +A +L+D M+ +   P       +I GL +  +  +A  VL
Sbjct: 131 DVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYLRAKGVL 190

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PDT TYN+++   C+   +  A  + DEM   G  PD+++++ ++  +  N
Sbjct: 191 DEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKN 250

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   QA+ +++D    G  P  + YTILI   C+   ++ A++V D+M  +GC  D+VTY
Sbjct: 251 GCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTY 310

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++N  CK+    +A  +   +  RG+ P+  T+ TL++     G  +    + ++M +
Sbjct: 311 NTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQ 370

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P V TYN LI+G CK   +++    +N M+S+   P+ ++Y  ++   C  G ++E
Sbjct: 371 RNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSE 430

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +        +IT NT++ G  + G   KA      M+  GI PD IT+ TLI 
Sbjct: 431 AFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLIN 490

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSA-------YRLVIHGLCKSKKVDMAIQVLELM 528
           GF + + ++ A  L+       NKM NS        Y ++++G  +  ++  A  ++  M
Sbjct: 491 GFIKEENMDRAFALV-------NKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKM 543

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           I     PD + +++++         +EA+++  ++++
Sbjct: 544 IERGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQ 580



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/406 (29%), Positives = 201/406 (49%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I  L +  +IE     L  M   G  PD +TYN ++   C++G +  A  L+D MS  G
Sbjct: 103 MINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKG 162

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P V TYN I+  +   GK+ +A G   + L+ G  P   TY IL+ + C+   +  A 
Sbjct: 163 LKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAE 222

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + D+M  +G  PD+V++++L+    K G  D A+    ++ + G+ P+++ Y  L+   
Sbjct: 223 RIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGF 282

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      K+ D M E      V TYN ++NGLCK  ++  A   F +M  +   PD 
Sbjct: 283 CRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDF 342

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            T+ T++    K+G +N+A+ L  ++   +  P ++TYNTLIDG  K   MEK   L+  
Sbjct: 343 YTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWND 402

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+   I P+ I++  LI G+C    V EA  L  E+ ++G +        ++ G C++  
Sbjct: 403 MISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGN 462

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              A + L  M+     PD   ++T++     +   + A+ L  K+
Sbjct: 463 AVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKM 508



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 217/450 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   K+ +    +  M  +   PD      LI    R   +E+A +++  M
Sbjct: 99  TLNIMINALCKNQKIENTKSFLSDMEEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSM 158

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P   TYN ++ GLCK G+   A  +LDEM   G  PD  TYN +L     N   
Sbjct: 159 SGKGLKPCVFTYNAIINGLCKTGKYLRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNM 218

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   + +   +G  P L++++ LI  + K   + +A++   DM   G +PD V Y  L
Sbjct: 219 MDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTIL 278

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C+ G   +A+ V + +L +G   + +TYNT+L+ L         D++   M E   
Sbjct: 279 IGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKEKMLSEADELFTEMTERGV 338

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  +T+  LING  K G +++A+  F  M+ +N +PD+VTYNT++   CK   + +  +
Sbjct: 339 FPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNE 398

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L + +      P  I+Y  LI+G    GC+ +A  L+ +M+E G     IT  T++ G+C
Sbjct: 399 LWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVEKGFEATIITCNTIVKGYC 458

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           RA    +A + L  +  +G       Y  +I+G  K + +D A  ++  M +S   PD  
Sbjct: 459 RAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDRAFALVNKMENSGLLPDVI 518

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            ++ I+   +  G  +EA  +  K+IE  V
Sbjct: 519 TYNVILNGFSRQGRMQEAELIMLKMIERGV 548



 Score =  205 bits (521), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 201/382 (52%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C    + DA ++ D M  +  +PD      LI  L +   +++A K  
Sbjct: 201 DTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALIGLLSKNGCLDQALKYF 260

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +G  PD + Y +++GG C+ G +  A+ + DEM   GC  DV+TYNTIL  +   
Sbjct: 261 RDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCVLDVVTYNTILNGLCKE 320

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A   + +   +G  P   T+T LI    K   + +A+ + + M      PD+VTY
Sbjct: 321 KMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLFEMMIQRNLKPDVVTY 380

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK  + +    + N+++SR + PN I+Y  L++   + GC     ++ D M E
Sbjct: 381 NTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNMGCVSEAFRLWDEMVE 440

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                T+ T N ++ G C+ G   +A    + M+ K   PD +TYNT++    KE  ++ 
Sbjct: 441 KGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITYNTLINGFIKEENMDR 500

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L++ +  S   P +ITYN +++G +++G M++A ++  +M+E G++PD  T+ +LI 
Sbjct: 501 AFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIERGVNPDRSTYTSLIN 560

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G    + ++EA  +  E+ +RG
Sbjct: 561 GHVTQNNLKEAFRVHDEMLQRG 582



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 104/405 (25%), Positives = 201/405 (49%), Gaps = 2/405 (0%)

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           + R+E    ++      G  P  + ++++V    +  ++R        +   G    +  
Sbjct: 7   VSRVEIVESLVLTYGNCGSNP--LVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSINA 64

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
            N++L  +   G    A   +++ +R G    + T  I+I  +CK   I      L DM 
Sbjct: 65  CNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDME 124

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +G  PD+VTYN+L+N  C+QG  ++A  +++++  +G++P   TYN +++ L   G + 
Sbjct: 125 EKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKYL 184

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +LD M +   SP   TYNIL+   C+   +  A   F++M S+   PD+V+++ ++
Sbjct: 185 RAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSALI 244

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
           G L K G L++AL+    +  +  +P  + Y  LI G  + G M +A+ +  +M+E G  
Sbjct: 245 GLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGCV 304

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
            D +T+ T++ G C+   + EA +L  E+ +RG       +  +I+G  K   ++ A+ +
Sbjct: 305 LDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTL 364

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            E+MI    KPD   ++T++         E+  +LW  +I  +++
Sbjct: 365 FEMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIY 409



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 185/367 (50%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K G  R  I     ++   C  + + ++ ++RT     K ++    ++    KG    + 
Sbjct: 4   KSGVSRVEIVESLVLTYGNCGSNPLVFDLLVRTYVQARKLREGCEAFRVLKSKGLCVSIN 63

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
               L+  + K   +  A E+  ++   G   ++ T N ++N  CK  K ++    ++++
Sbjct: 64  ACNSLLGGLVKVGWVDLAWEIYQEVVRSGVQVNVYTLNIMINALCKNQKIENTKSFLSDM 123

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             +G+ P+ +TYNTL+++   +G  +   +++D M+     P VFTYN +INGLCK G  
Sbjct: 124 EEKGVFPDVVTYNTLINAYCRQGLLEEAFELMDSMSGKGLKPCVFTYNAIINGLCKTGKY 183

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
            RA    ++M+     PD  TYN +L   C+   + +A ++   +      P L++++ L
Sbjct: 184 LRAKGVLDEMLKIGMSPDTATYNILLVECCRNDNMMDAERIFDEMPSQGVVPDLVSFSAL 243

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I  L+K GC+++A+  +  M   G++PD++ +  LI GFCR   + EA+ +  E+ ++G 
Sbjct: 244 IGLLSKNGCLDQALKYFRDMKNAGLAPDNVIYTILIGGFCRNGVMSEALKVRDEMLEQGC 303

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
            +    Y  +++GLCK K +  A ++   M      PD   F+T++   + DG   +A  
Sbjct: 304 VLDVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVT 363

Query: 559 LWQKLIE 565
           L++ +I+
Sbjct: 364 LFEMMIQ 370



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 79/281 (28%), Positives = 134/281 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N IL   C    L++A +L   M  R   PDF+    LI G  +   + KA  + 
Sbjct: 306 DVVTYNTILNGLCKEKMLSEADELFTEMTERGVFPDFYTFTTLINGYSKDGNMNKAVTLF 365

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M+     PD +TYN ++ G CK  ++     L ++M      P+ I+Y  ++    + 
Sbjct: 366 EMMIQRNLKPDVVTYNTLIDGFCKGSEMEKVNELWNDMISRRIYPNHISYGILINGYCNM 425

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   W + + KG    +IT   +++  C+     +A E L +M ++G  PD +TY
Sbjct: 426 GCVSEAFRLWDEMVEKGFEATIITCNTIVKGYCRAGNAVKADEFLSNMLLKGIVPDGITY 485

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N   K+   D A  ++N + + G+ P+ ITYN +L+    +G     + I+  M E
Sbjct: 486 NTLINGFIKEENMDRAFALVNKMENSGLLPDVITYNVILNGFSRQGRMQEAELIMLKMIE 545

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +P   TY  LING      +  A    ++M+ +   PD
Sbjct: 546 RGVNPDRSTYTSLINGHVTQNNLKEAFRVHDEMLQRGFVPD 586


>gi|218197600|gb|EEC80027.1| hypothetical protein OsI_21710 [Oryza sativa Indica Group]
          Length = 694

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 147/521 (28%), Positives = 250/521 (47%), Gaps = 58/521 (11%)

Query: 102 DPSLPSSDGPF-------VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHF 154
           D SLPS+           V  +  T N +++  C+RG+L +A  ++  M      P+   
Sbjct: 130 DASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVT 189

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEM 213
              L+    R   ++ A +V+ +M   G   P+ +T+N MV GLCK G++  A  + DEM
Sbjct: 190 YNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEM 249

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              G  PDV++YNT+L      G   +++  + +  ++G  P ++T+T LI   CK   +
Sbjct: 250 VREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNL 309

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            +A+ ++  M   G   + VT+ +L++  CK+G  DDA+L +  +   G++P+ + YN L
Sbjct: 310 EQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNAL 369

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           ++     G  D   +++  M      P V TY+ +I+G CK G +D A     +M+ K  
Sbjct: 370 INGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGV 429

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD +TY++++  LC+E  LN+A +L   +      P   TY TLIDG  K+G +EKA+ 
Sbjct: 430 LPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALS 489

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL----------------------- 490
           L+ +M+  G+ PD +T+  LI G  ++ + +EA  LL                       
Sbjct: 490 LHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCS 549

Query: 491 --------------------KEIGK-------RGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
                               KE  K       R  K+  S Y ++IHG C+   V  A+ 
Sbjct: 550 KAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALS 609

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             + M+ S + P+ T   ++V+ + ++GM  EA    Q L+
Sbjct: 610 FHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDLL 650



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 235/458 (51%), Gaps = 18/458 (3%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           S   L  A + +  M R    P+ +    L+R L    R+E+A  V+  M  +G  P+ +
Sbjct: 129 SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAV 188

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           TYN +V   C+ G++  A  ++  M   G  +P+++T+N+++  +   G+ + A   + +
Sbjct: 189 TYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDE 248

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            +R+G  P +++Y  L+   CK   +  ++ V  +M   G  PD+VT+ SL++ +CK G 
Sbjct: 249 MVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGN 308

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            + AV ++  +  RG+  N +T+  L+     +G  D     ++ M +    P+V  YN 
Sbjct: 309 LEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNA 368

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING CK G +D A     +M +K  +PD+VTY+T++   CK G L+ A QL   +    
Sbjct: 369 LINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKG 428

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P  ITY++LI GL ++  +  A  L+  M++ G+ PD+ T+ TLI G C+   VE+A+
Sbjct: 429 VLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKAL 488

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS------ 541
            L  E+ ++G       Y ++I+GL KS +   A ++L  +      PD+  +       
Sbjct: 489 SLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCC 548

Query: 542 ---------TIVKKVADDGMTEEAYKLWQKLIE--WKV 568
                     ++K     G+ +EA K++Q +++  WK+
Sbjct: 549 SKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRNWKL 586



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 104/353 (29%), Positives = 189/353 (53%), Gaps = 2/353 (0%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P V  YN +L  + D      A  F    LR G  P + TY IL+  +C +  +  A
Sbjct: 113 GYAPSVPAYNAVLLALSD-ASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLH 335
           + V+ DM   GC+P+ VTYN+LV   C+ G+ D A  V++ +   G  +PN +T+N++++
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L   G  +   K+ D M     +P V +YN L++G CK G +  ++  F++M  +   P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D+VT+ +++ A CK G L +A+ L+  +         +T+  LIDG  KKG ++ A++  
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M + GI P  + +  LI G+C+  +++ A +L++E+  +  K     Y  +I G CK 
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +D A Q+ + M+     PD   +S++++ + ++    +A +L++ +++  V
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDACELFENMLQLGV 464



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 101/324 (31%), Positives = 180/324 (55%), Gaps = 2/324 (0%)

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P +  Y  ++  +     +  A   L  M   G +P++ TYN LV   C +G+ ++A
Sbjct: 113 GYAPSVPAYNAVLLAL-SDASLPSARRFLSSMLRHGVAPNVYTYNILVRALCARGRLEEA 171

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS-PTVFTYNILIN 370
           V V+ ++   G  PN++TYNTL+ +    G  D  ++++ +M E  ++ P + T+N ++N
Sbjct: 172 VGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLMREEGNAKPNLVTFNSMVN 231

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GLCK G ++ A   F++MV +   PD+V+YNT+L   CK G L+E+L +   +      P
Sbjct: 232 GLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGCLHESLAVFSEMTQRGLVP 291

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            ++T+ +LI    K G +E+A+ L  QM E G+  +++T   LI GFC+   +++A+  +
Sbjct: 292 DVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTALIDGFCKKGFLDDALLAV 351

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +E+ K G +     Y  +I+G CK  ++D+A +++  M + R KPD   +STI+      
Sbjct: 352 EEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKRVKPDVVTYSTIISGYCKV 411

Query: 551 GMTEEAYKLWQKLIEWKVFEKGTT 574
           G  + A++L QK+++  V     T
Sbjct: 412 GNLDSAFQLNQKMLKKGVLPDAIT 435



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 207/454 (45%), Gaps = 39/454 (8%)

Query: 68  DRVNEVDQDEWSSESHVLAVNKKLRGLTIT------KKSHDPSLPSSDGPFVENDEKTNN 121
           +RV  + ++E +++ +++  N  + GL         +K  D  +     P    D  + N
Sbjct: 207 ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP----DVVSYN 262

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
            +L  +C  G L ++  +   M +R  +PD     +LI    +   +E+A  ++  M   
Sbjct: 263 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 322

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   + +T+  ++ G CK+G +  A+  ++EM   G +P V+ YN ++      G+   A
Sbjct: 323 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 382

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
               ++   K   P ++TY+ +I   CK   +  A ++   M  +G  PD +TY+SL+  
Sbjct: 383 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 442

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C++ + +DA  +  N+L  G++P+  TY TL+      G  +    + D M      P 
Sbjct: 443 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 502

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN---------------TVLGA 406
           V TY++LINGL K      A     ++  ++  PD + Y+                +L  
Sbjct: 503 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 562

Query: 407 LCKEGMLNEALQLLHL-------LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
            C +G++ EA ++          L+GS        Y+ LI G  + G + KA+  + QM+
Sbjct: 563 FCMKGLMKEADKVYQSMLDRNWKLDGS-------VYSILIHGHCRGGNVRKALSFHKQML 615

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            +G SP+  +  +L+ G      V EA + ++++
Sbjct: 616 RSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 649



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 19/232 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ DE T   ++   C  G +  A  L D M R+  +PD      LI GL +  R ++A 
Sbjct: 464 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 523

Query: 173 KVLQIMVMSGGVPDTITYNMM---------------VGGLCKRGQIRSAIALLDEMSVSG 217
           ++L  +     VPD I Y+ +               + G C +G ++ A  +   M    
Sbjct: 524 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 583

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            + D   Y+ ++      G  ++A+ F K  LR G  P   +   L+  + ++  +  A 
Sbjct: 584 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 643

Query: 278 EVLDDMAIEGCSP--DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
             + D+    C P  D     +L++ + K+G  D  + V+  +   G+ P+S
Sbjct: 644 NAIQDLLT--CCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 693


>gi|297842697|ref|XP_002889230.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335071|gb|EFH65489.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 580

 Score =  229 bits (583), Expect = 4e-57,   Method: Compositional matrix adjust.
 Identities = 148/527 (28%), Positives = 259/527 (49%), Gaps = 59/527 (11%)

Query: 85  LAVNKKLRGLTITKKSHDPSLPS---SDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           + ++ K    TIT  S  P L S   SD P   +DE +             L+D    ++
Sbjct: 54  ITLSPKDSAFTITGSSWKPDLGSGSFSDDP--RSDEPS-------------LSDTFSHLE 98

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            +      P+      L+  L + +R++KA +V+++MV SG +PD   Y  +V  LCKRG
Sbjct: 99  CLVTDGHKPNVAHSTQLLYDLCKANRLKKAIRVIELMVSSGIIPDASAYTYLVNQLCKRG 158

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
            +  A+ L+++M   G   + +TYN ++R +   G   Q++ F +  +++G  P   TY+
Sbjct: 159 NVGYAMQLVEKMEDHGFPSNTVTYNALVRGLCMLGSLNQSLQFVERLMQRGLAPNAFTYS 218

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            L+E   K+ G  +A+++LD++  +G  P++V+YN L+   CK+G+ DDA+ +   L  +
Sbjct: 219 FLLEAAYKERGTDQAVKLLDEIIAKGGQPNLVSYNVLLTGFCKEGRTDDAMKLFRELPVK 278

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING---------- 371
           G + N ++YN LL  L   G WD  + +L  M+    +P+V TYNILIN           
Sbjct: 279 GFKANVVSYNILLRCLCCDGRWDEANSLLAEMDGGDRAPSVVTYNILINSLAFHGRTEQA 338

Query: 372 ----------------------------LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
                                       LCK G VD  +   ++M+ + C+P+  TY+ +
Sbjct: 339 MQVLKEMSKGHHHQFRVTATSYNPVIARLCKEGKVDLVVKCLDEMIYRRCKPNEGTYSAI 398

Query: 404 LGALCKE-GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
            GALC+  G + EA  ++  L+          Y ++I  + +KG    A  L  +M   G
Sbjct: 399 -GALCEHNGKVQEAFYIIQSLSNKQKCCTHDFYKSVITSMCRKGNTFAAFQLLYEMTRCG 457

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK-RGNKMRNSAYRLVIHGLCKSKKVDMA 521
             PD  T+  LI G C       A+++L  + +   +K     +  +I GLCK ++ D+A
Sbjct: 458 FDPDAHTYSALIRGLCLEGMFIGAMEVLSIMEESEYHKPTVDNFNAMILGLCKIRRTDLA 517

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++V E+M+  +  P++T ++ IV+ +A +   E A ++ ++L   KV
Sbjct: 518 LEVFEMMVGKKRMPNETTYAIIVEGIAHEDELELAKEVLEELRSRKV 564


>gi|302818229|ref|XP_002990788.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
 gi|300141349|gb|EFJ08061.1| hypothetical protein SELMODRAFT_132337 [Selaginella moellendorffii]
          Length = 624

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 120/386 (31%), Positives = 211/386 (54%), Gaps = 3/386 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           PD  T+ +++ GLC+  Q+  A  LL  M   GC PD   YN ++        F QA  F
Sbjct: 8   PDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFKF 67

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
             + ++  C P ++TYT +++ +CK      A+++LD+M  +GCSP+I TYN +V   C+
Sbjct: 68  LAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLCE 127

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           + K D+A  ++  +  RG  P+ +TYN+ +  L      D VD+    +     +P V +
Sbjct: 128 ERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCK---CDRVDEARKFLARMPVTPDVVS 184

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y  +INGLCK G +D A    +QM ++ C PD+VTY++++   CK G +  A+ LL  + 
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
              C P ++ YN+L+  L + G + KA  +  +M   G +PD +++   I G C+A++V+
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 304

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +A  +   + +RG     S+Y +++  LCK K++D AI ++E         D  +++ ++
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLL 364

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVFE 570
             +   G  +EA  L+ K+++ K+ E
Sbjct: 365 DGLCKGGRFDEACALFSKVLDEKICE 390



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 126/419 (30%), Positives = 234/419 (55%), Gaps = 8/419 (1%)

Query: 150 PD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           PD F F I L+RGL R +++EKA ++L  M   G VPD   YN ++ G  K      A  
Sbjct: 8   PDAFTFAI-LLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAFK 66

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
            L EM  + C P V+TY  I+  +   G+ K A+    +   KGC P + TY +++E +C
Sbjct: 67  FLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-GMEPNS 327
           ++  +  A ++L++MA+ G  PD+VTYNS +   CK  + D+A       L+R  + P+ 
Sbjct: 127 EERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEA----RKFLARMPVTPDV 182

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           ++Y T+++ L   G  D+  ++LD M     +P V TY+ LI+G CK G V+RA+   + 
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M+   C+P++V YN++LGAL + G + +A  +L  +     +P +++YN  IDGL K   
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           ++KA  ++ +M+E G +P+  ++  L+   C+  ++++A+ L+++  ++   +    Y +
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTV 362

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRY-KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++ GLCK  + D A  +   ++  +  +PD   ++ ++         ++A ++ ++++E
Sbjct: 363 LLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIHKQMLE 421



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 240/451 (53%), Gaps = 5/451 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+   N ++  +        A K +  M + + +P      N++ GL +  R + A K+L
Sbjct: 44  DDAIYNALISGYSKAKDFGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLL 103

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+  TYN++V GLC+  ++  A  +L+EM+V G  PDV+TYN+ ++ +   
Sbjct: 104 DEMRDKGCSPNIYTYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKC 163

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A  F     R    P +++YT +I  +CK   +  A  +LD M   GC+PD+VTY
Sbjct: 164 DRVDEARKFLA---RMPVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTY 220

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +SL++  CK G+ + A+ +++++L  G  PN + YN+LL +L   G     + +L  M  
Sbjct: 221 SSLIDGFCKGGEVERAMGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMER 280

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P V +YN  I+GLCK   V +A   F++MV + C P+  +Y+ ++  LCK+  L++
Sbjct: 281 RGFTPDVVSYNACIDGLCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDD 340

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI-SPDDITHRTLI 474
           A+ L+           ++ Y  L+DGL K G  ++A  L+ ++++  I  PD   +  ++
Sbjct: 341 AITLVEQAREKYQIVDILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVML 400

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              C+  Q+++A+ + K++ +R N      + +++HGLC   ++  A  +L  M+   + 
Sbjct: 401 DSHCKRRQIDKALQIHKQMLER-NCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFI 459

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   + T+V  +   G +  A +L+++ ++
Sbjct: 460 PDFVTYGTLVDAMCKCGKSAAALELFEEAVK 490



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/455 (27%), Positives = 220/455 (48%), Gaps = 41/455 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA------- 171
           T N I++  C   KL +A K+++ MA R   PD     + I+GL + DR+++A       
Sbjct: 117 TYNVIVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM 176

Query: 172 -------------------------SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
                                    S++L  M   G  PD +TY+ ++ G CK G++  A
Sbjct: 177 PVTPDVVSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERA 236

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           + LLD M   GC P+++ YN++L  +   G   +A     +  R+G  P +++Y   I+ 
Sbjct: 237 MGLLDSMLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDG 296

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +CK   + +A  V D M   GC+P+  +Y+ LV   CK+ + DDA+ ++     +    +
Sbjct: 297 LCKAERVKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVD 356

Query: 327 SITYNTLLHSLGSRGCWDAVDKILD-IMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
            + Y  LL  L   G +D    +   +++E    P VF YN++++  CK   +D+A+   
Sbjct: 357 ILLYTVLLDGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKRRQIDKALQIH 416

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            QM+ +NC  ++VT+N ++  LC +  L++A  +L  +      P  +TY TL+D + K 
Sbjct: 417 KQMLERNC-CNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKC 475

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G    A+ L+ + ++ G  PD +T+  LI G    +  EEA  L         K+  + +
Sbjct: 476 GKSAAALELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLF-------TKLDVALW 528

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             +I G  ++   D+ +++   +I S  +P+   F
Sbjct: 529 NAMILGYAENGSGDLGLKLFVELIESDVEPNARTF 563



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/351 (32%), Positives = 180/351 (51%), Gaps = 10/351 (2%)

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+PD  T+  +LR +  + + ++A          GC P    Y  LI    K     +A 
Sbjct: 6   CQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKDFGQAF 65

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           + L +M    C P +VTY ++V+  CK G+  DAV +++ +  +G  PN  TYN ++  L
Sbjct: 66  KFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGL 125

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                 D   K+L+ M    + P V TYN  I GLCK   VD A     +M      PD+
Sbjct: 126 CEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARM---PVTPDV 182

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V+Y TV+  LCK G L+ A ++L  +    C+P ++TY++LIDG  K G +E+AM L   
Sbjct: 183 VSYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDS 242

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M++ G  P+ + + +L+    R   + +A D+L E+ +RG      +Y   I GLCK+++
Sbjct: 243 MLKLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAER 302

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIV-----KKVADDGMT--EEAYKLWQ 561
           V  A  V + M+     P+ + +S +V     KK  DD +T  E+A + +Q
Sbjct: 303 VKKAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQ 353



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 145/568 (25%), Positives = 263/568 (46%), Gaps = 29/568 (5%)

Query: 10  SIIELHCLPNLQWCSRQVSLQHGVVNNHRTQ----FYSQLRDLGAGRNV---SLKCRGLP 62
            +++ HCLP +   +  V    G+    RT+       ++RD G   N+   ++   GL 
Sbjct: 70  EMVKNHCLPTVVTYTNIVD---GLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNVIVEGLC 126

Query: 63  GNVCIDRVNEVDQDEWSSESH---VLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKT 119
               +D   ++  +E +   +   V+  N  ++GL    +  +     +  P V  D  +
Sbjct: 127 EERKLDEAKKM-LEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMP-VTPDVVS 184

Query: 120 NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
              ++   C  G L  AS+++D M  R   PD     +LI G  +   +E+A  +L  M+
Sbjct: 185 YTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAMGLLDSML 244

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  P+ + YN ++G L + G I  A  +L EM   G  PDV++YN  +  +    + K
Sbjct: 245 KLGCRPNMVAYNSLLGALHRLGHIGKAEDMLVEMERRGFTPDVVSYNACIDGLCKAERVK 304

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A   +   + +GC P   +Y++L+E++CK+  +  AI +++    +    DI+ Y  L+
Sbjct: 305 KAKAVFDRMVERGCTPNASSYSMLVEELCKKKELDDAITLVEQAREKYQIVDILLYTVLL 364

Query: 300 NFSCKQGKYDDAVLVINNLLSRGM-EPNSITYNTLLHSLGSRGCWDAVDKILDIMNE--A 356
           +  CK G++D+A  + + +L   + EP+   YN +L S   R     +DK L I  +   
Sbjct: 365 DGLCKGGRFDEACALFSKVLDEKICEPDVFFYNVMLDSHCKR---RQIDKALQIHKQMLE 421

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            +   V T+NIL++GLC    +  A      MV +   PD VTY T++ A+CK G    A
Sbjct: 422 RNCCNVVTWNILVHGLCVDDRLSDAETMLLTMVDEGFIPDFVTYGTLVDAMCKCGKSAAA 481

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           L+L        C P ++TY+ LI GL  +   E+A +L+ ++       D      +I G
Sbjct: 482 LELFEEAVKGGCVPDVVTYSALITGLVHENMAEEAYLLFTKL-------DVALWNAMILG 534

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG-LCKSKKVDMAIQVLELMISSRYKP 535
           +      +  + L  E+ +   +     +   I G L K++ +  A  + +  +   + P
Sbjct: 535 YAENGSGDLGLKLFVELIESDVEPNARTFGKEISGKLVKAESLGKARGLFDRAVKGGFFP 594

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D  V +T++   A  G  EEA +++  +
Sbjct: 595 DLFVANTLIDVFAKCGDLEEARRIFYSM 622



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/248 (28%), Positives = 126/248 (50%), Gaps = 3/248 (1%)

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           ++ +  +P++ T+  LL  L      +   ++L  M E    P    YN LI+G  K   
Sbjct: 1   MIDKSCQPDAFTFAILLRGLCRSNQLEKARQLLGRMKEMGCVPDDAIYNALISGYSKAKD 60

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
             +A     +MV  +C P +VTY  ++  LCK G   +A++LL  +    CSP + TYN 
Sbjct: 61  FGQAFKFLAEMVKNHCLPTVVTYTNIVDGLCKAGRTKDAVKLLDEMRDKGCSPNIYTYNV 120

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +++GL ++  +++A  +  +M   G  PD +T+ + I G C+ D+V+EA   L  +    
Sbjct: 121 IVEGLCEERKLDEAKKMLEEMAVRGYFPDVVTYNSFIKGLCKCDRVDEARKFLARMPVTP 180

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           + +   +Y  VI+GLCKS  +D A ++L+ M +    PD   +S+++      G  E A 
Sbjct: 181 DVV---SYTTVINGLCKSGDLDSASRMLDQMTNRGCTPDVVTYSSLIDGFCKGGEVERAM 237

Query: 558 KLWQKLIE 565
            L   +++
Sbjct: 238 GLLDSMLK 245


>gi|293330959|ref|NP_001169662.1| uncharacterized protein LOC100383543 [Zea mays]
 gi|224030695|gb|ACN34423.1| unknown [Zea mays]
 gi|414870691|tpg|DAA49248.1| TPA: hypothetical protein ZEAMMB73_502001 [Zea mays]
          Length = 756

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 141/489 (28%), Positives = 242/489 (49%), Gaps = 7/489 (1%)

Query: 84  VLAVNKKLRGLTITKKSHDP--SLPSSDGPFVEND----EKTNNKILQNFCSRGKLTDAS 137
           V A++ + R LT  ++  DP  +L   +      D         +I+Q   + G      
Sbjct: 50  VYAISDQDRLLTALREQADPEAALQMLNSALAREDFAPSRAVYEEIIQKLGTAGAFDLME 109

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGG 196
            L+  M R           + +    R+ R + A  +++  + + GV  DT  YN ++  
Sbjct: 110 GLVREMRREGHEAGAGVVRSFVESYARLRRFDDAVDLVRNQLNTFGVQADTAVYNHLLNV 169

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           L +  +++   ++ +EM+  G +PDV+T NT+++ +    + + A+   ++       P 
Sbjct: 170 LAEGSRMKLLESVYNEMTDRGIQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPD 229

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
             T+T L++   ++  I  A+ V   M   GCSP  VT N L+N  CK G+ +DA+  I 
Sbjct: 230 ETTFTTLMQGFIEEGSIEAALRVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQ 289

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
             ++ G EP+ +TYNT +H L   G      K++D+M +  H P VFTYN +IN L K G
Sbjct: 290 KEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNG 349

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +D A    NQMV + C PD  T+NT++ ALC +  L EAL L   L     SP + T+N
Sbjct: 350 ELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFN 409

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            LI+ L K G     + L+ +M  +G +PD++T+  LI   C   ++  A+DLLKE+   
Sbjct: 410 ILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESN 469

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       Y  +I  LCK  +++ A +V + M +         F+T++  +      ++A
Sbjct: 470 GCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDA 529

Query: 557 YKLWQKLIE 565
            +L +++++
Sbjct: 530 TELIEQMVK 538



 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 238/453 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N +++  C   ++  A  +++ M+     PD      L++G I    IE A 
Sbjct: 191 IQPDVVTLNTLIKALCRAHQVRTAVLMLEEMSSHAVAPDETTFTTLMQGFIEEGSIEAAL 250

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V   M+ +G  P  +T N+++ G CK G++  A+  + +    G EPD +TYNT +  +
Sbjct: 251 RVKTKMMETGCSPTRVTVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCL 310

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG    A+      L++G  P + TY  +I  + K   +  A  +++ M   GC PD 
Sbjct: 311 CQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDT 370

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+N+L+   C Q + ++A+ +   L  +G+ P+  T+N L+++L   G      ++ + 
Sbjct: 371 TTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEE 430

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M  +  +P   TYNILI+ LC  G +  A++   +M S  C    VTYNT++ ALCK+  
Sbjct: 431 MKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMR 490

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA ++   ++    S   +T+NTLIDGL K   ++ A  L  QM++ G+ P +IT+ +
Sbjct: 491 IEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNS 550

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++  +C+   +++A D+L+ +   G ++    Y  +I+GLCK+ +  +A+++L  M    
Sbjct: 551 ILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKG 610

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +P    ++ +++ +       +A  L++++ E
Sbjct: 611 IRPTPKAYNPVIQSLFRRNNLRDALSLFREMTE 643



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 224/432 (51%), Gaps = 4/432 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           +DG   E D+ T N  +   C  G ++ A K++D+M +    PD      +I  L +   
Sbjct: 293 ADG--FEPDQVTYNTFVHCLCQNGHVSHALKVMDLMLQEGHDPDVFTYNTVINCLSKNGE 350

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +++A  ++  MV  G +PDT T+N ++  LC + ++  A+ L  E++V G  PDV T+N 
Sbjct: 351 LDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRLEEALDLARELTVKGLSPDVYTFNI 410

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +   G     I  +++    GC P  +TY ILI+ +C    +  A+++L +M   G
Sbjct: 411 LINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNILIDHLCSMGKLVNALDLLKEMESNG 470

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           C    VTYN++++  CKQ + ++A  V + + + G+  +++T+NTL+  L      D   
Sbjct: 471 CPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGISRSAVTFNTLIDGLCKAKRIDDAT 530

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++++ M +    P+  TYN ++   CK G + +A +    M +   + D+VTY T++  L
Sbjct: 531 ELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAADILETMTANGFEIDVVTYGTLINGL 590

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CK G    AL+LL  +      P    YN +I  L ++  +  A+ L+ +M E G  PD 
Sbjct: 591 CKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLFRRNNLRDALSLFREMTEVGEPPDA 650

Query: 468 ITHRTLIWGFCR-ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           +T++ +  G CR    ++EA D L E+  +G     S++R++  GL      D  I  +E
Sbjct: 651 LTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEFSSFRMLAEGLLNLGMDDYLISAIE 710

Query: 527 LMIS-SRYKPDD 537
           L+I  ++++  D
Sbjct: 711 LIIEKAKFRESD 722



 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 227/454 (50%), Gaps = 1/454 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++ DA   I         PD       +  L +   +  A KV+ +M
Sbjct: 267 TVNVLINGYCKMGRVEDALGYIQKEIADGFEPDQVTYNTFVHCLCQNGHVSHALKVMDLM 326

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD  TYN ++  L K G++  A  ++++M   GC PD  T+NT++  +    + 
Sbjct: 327 LQEGHDPDVFTYNTVINCLSKNGELDEAKGIVNQMVDRGCLPDTTTFNTLIVALCSQNRL 386

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+   ++   KG  P + T+ ILI  +CK       I + ++M   GC+PD VTYN L
Sbjct: 387 EEALDLARELTVKGLSPDVYTFNILINALCKVGDPHLGIRLFEEMKSSGCAPDEVTYNIL 446

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  GK  +A+ ++  + S G   +++TYNT++ +L  +   +  +++ D M+    
Sbjct: 447 IDHLCSMGKLVNALDLLKEMESNGCPRSTVTYNTIIDALCKQMRIEEAEEVFDQMDAHGI 506

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S +  T+N LI+GLCK   +D A     QMV +  QP  +TYN++L   CK+G L +A  
Sbjct: 507 SRSAVTFNTLIDGLCKAKRIDDATELIEQMVKEGLQPSNITYNSILTHYCKQGDLKKAAD 566

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +  +     ++TY TLI+GL K G  + A+ L   M   GI P    +  +I    
Sbjct: 567 ILETMTANGFEIDVVTYGTLINGLCKAGRTQVALKLLRGMRIKGIRPTPKAYNPVIQSLF 626

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-SKKVDMAIQVLELMISSRYKPDD 537
           R + + +A+ L +E+ + G       Y++V  GLC+    +  A   L  M++  + P+ 
Sbjct: 627 RRNNLRDALSLFREMTEVGEPPDALTYKIVFRGLCRGGGPIKEAFDFLVEMVNKGFMPEF 686

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           + F  + + + + GM +      + +IE   F +
Sbjct: 687 SSFRMLAEGLLNLGMDDYLISAIELIIEKAKFRE 720


>gi|83744088|gb|ABC42330.1| PPR protein [Oryza sativa Indica Group]
          Length = 791

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 144/519 (27%), Positives = 253/519 (48%), Gaps = 42/519 (8%)

Query: 83  HVLAVNKKLRGLTITKKSHDP-----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDAS 137
           +V + N  L+GL    +S +       +    G     D  +   ++  F   G    A 
Sbjct: 157 NVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKEGDSDKAY 216

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
                M  R  +PD     ++I  L +   ++KA +VL  MV +G +PD +TYN ++ G 
Sbjct: 217 STYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGY 276

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C  GQ + AI  L +M   G EPDV+TY+ ++  +  NG+  +A   +    ++G  P +
Sbjct: 277 CSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEI 336

Query: 258 ITY-----------------------------------TILIEQVCKQCGIARAIEVLDD 282
            TY                                   +ILI     Q  + +A+ V   
Sbjct: 337 TTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSK 396

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  +G +P+ VTY +++   CK G+ +DA+L    ++  G+ P +I YN+L+H L +   
Sbjct: 397 MRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNK 456

Query: 343 WDAVDK-ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
           W+  ++ IL++++      T+F +N +I+  CK G V  +   F  MV    +P+++TYN
Sbjct: 457 WERAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYN 515

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           T++   C  G ++EA++LL  +      P  +TY+TLI+G  K   ME A+VL+ +M  +
Sbjct: 516 TLINGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESS 575

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G+SPD IT+  ++ G  +  +   A +L   I + G ++  S Y +++HGLCK+K  D A
Sbjct: 576 GVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDA 635

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           +Q+ + +     K +   F+ ++  +   G  +EA  L+
Sbjct: 636 LQMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLF 674



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 228/449 (50%), Gaps = 12/449 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQ----IPD-FHFCINLIRGLIRIDRIEKASKVLQI 177
           +L+  C+  + +DA   +DI+ RR      IP+ F + I L++GL   +R ++A ++L +
Sbjct: 128 LLKGLCADKRTSDA---MDIVLRRMTELGCIPNVFSYNI-LLKGLCDENRSQEALELLHM 183

Query: 178 MV---MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           M      G  PD ++Y  ++ G  K G    A +   EM   G  PDV+TYN+I+  +  
Sbjct: 184 MADDRGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCK 243

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
                +A+      ++ G  P  +TY  ++   C       AI  L  M  +G  PD+VT
Sbjct: 244 AQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVT 303

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ L+++ CK G+  +A  + +++  RG++P   TY TLL    ++G    +  +LD+M 
Sbjct: 304 YSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMV 363

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P  + ++ILI      G VD+A+  F++M  +   P+ VTY  V+G LCK G + 
Sbjct: 364 RNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVE 423

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A+     +     SP  I YN+LI GL      E+A  L  +M++ GI  + I   ++I
Sbjct: 424 DAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSII 483

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              C+  +V E+  L + + + G K     Y  +I+G C + K+D A+++L  M+S   K
Sbjct: 484 DSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMVSVGLK 543

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           P+   +ST++         E+A  L++++
Sbjct: 544 PNTVTYSTLINGYCKISRMEDALVLFKEM 572



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 210/411 (51%), Gaps = 4/411 (0%)

Query: 158 LIRGLIRIDRIEKASK-VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-- 214
           L++GL    R   A   VL+ M   G +P+  +YN+++ GLC   + + A+ LL  M+  
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADD 187

Query: 215 -VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              G  PDV++Y T++   F  G   +A   + + L +G  P ++TY  +I  +CK   +
Sbjct: 188 RGGGSPPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAM 247

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            +A+EVL+ M   G  PD +TYNS+++  C  G+  +A+  +  + S G+EP+ +TY+ L
Sbjct: 248 DKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLL 307

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L   G      KI D M +    P + TY  L+ G    G +       + MV    
Sbjct: 308 MDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGI 367

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD   ++ ++ A   +G +++A+ +   +     +P  +TY  +I  L K G +E AM+
Sbjct: 368 HPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAML 427

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
            + QM++ G+SP +I + +LI G C  ++ E A +L+ E+  RG  +    +  +I   C
Sbjct: 428 YFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHC 487

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           K  +V  + ++ ELM+    KP+   ++T++      G  +EA KL   ++
Sbjct: 488 KEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAMKLLSGMV 538



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 216/443 (48%), Gaps = 12/443 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + D + RR +    +    L R L  + R   A+ V +   M  +G     PD  T
Sbjct: 33  DARHVFDELLRRGRGASIY---GLNRALADVARDSPAAAVSRYNRMARAGADEVTPDLCT 89

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C+ G++    A L  +   G   D I +  +L+ +  + +   A+     ++
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE---GCSPDIVTYNSLVNFSCKQ 305
            + GC P + +Y IL++ +C +     A+E+L  MA +   G  PD+V+Y +++N   K+
Sbjct: 150 TELGCIPNVFSYNILLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYTTVINGFFKE 209

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G  D A    + +L RG+ P+ +TYN+++ +L      D   ++L+ M +    P   TY
Sbjct: 210 GDSDKAYSTYHEMLDRGILPDVVTYNSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 269

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N +++G C  G    AI    +M S   +PD+VTY+ ++  LCK G   EA ++   +  
Sbjct: 270 NSILHGYCSSGQPKEAIGFLKKMRSDGVEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTK 329

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P + TY TL+ G A KG + +   L   M+ NGI PD      LI  +    +V++
Sbjct: 330 RGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQ 389

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+ +  ++ ++G       Y  VI  LCKS +V+ A+   E MI     P + V+++++ 
Sbjct: 390 AMLVFSKMRQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIH 449

Query: 546 KVADDGMTEEAYKLWQKLIEWKV 568
            +      E A +L  ++++  +
Sbjct: 450 GLCTCNKWERAEELILEMLDRGI 472



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 216/451 (47%), Gaps = 3/451 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +LQ + ++G L +   L+D+M R    PD +    LI       ++++A  V   M
Sbjct: 338 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKM 397

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ +TY  ++G LCK G++  A+   ++M   G  P  I YN+++  +    K+
Sbjct: 398 RQQGLNPNAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 457

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     + L +G     I +  +I+  CK+  +  + ++ + M   G  P+++TYN+L
Sbjct: 458 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTL 517

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C  GK D+A+ +++ ++S G++PN++TY+TL++        +    +   M  +  
Sbjct: 518 INGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGV 577

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP + TYNI++ GL +      A   + ++     Q ++ TYN +L  LCK  + ++ALQ
Sbjct: 578 SPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQ 637

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   L          T+N +ID L K G  ++A  L+     NG+ P+  T+R +     
Sbjct: 638 MFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENII 697

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
               +EE   L   +   G  + +     ++  L +  ++  A   L ++    +  + +
Sbjct: 698 GQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAS 757

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             S  +  ++  G  +E Y+   +  ++K F
Sbjct: 758 TASLFIDLLS-GGKYQEYYRFLPE--KYKSF 785



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 214/462 (46%), Gaps = 3/462 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE D  T + ++   C  G+  +A K+ D M +R   P+      L++G      
Sbjct: 294 SDG--VEPDVVTYSLLMDYLCKNGRCMEARKIFDSMTKRGLKPEITTYGTLLQGYATKGA 351

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  PD   +++++     +G++  A+ +  +M   G  P+ +TY  
Sbjct: 352 LVEMHGLLDLMVRNGIHPDHYVFSILICAYANQGKVDQAMLVFSKMRQQGLNPNAVTYGA 411

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G+ + A+ +++  + +G  P  I Y  LI  +C      RA E++ +M   G
Sbjct: 412 VIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRG 471

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              + + +NS+++  CK+G+  ++  +   ++  G++PN ITYNTL++     G  D   
Sbjct: 472 ICLNTIFFNSIIDSHCKEGRVIESEKLFELMVRIGVKPNVITYNTLINGYCLAGKMDEAM 531

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P   TY+ LING CK   ++ A+  F +M S    PDI+TYN +L  L
Sbjct: 532 KLLSGMVSVGLKPNTVTYSTLINGYCKISRMEDALVLFKEMESSGVSPDIITYNIILQGL 591

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +      A +L   +  S     L TYN ++ GL K    + A+ ++  +    +  + 
Sbjct: 592 FQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALQMFQNLCLMDLKLEA 651

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  + +EA DL       G       YRL+   +     ++   Q+   
Sbjct: 652 RTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLS 711

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           M  +    D  + + IV+++   G    A   +  +I+ K F
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEKHF 752


>gi|302759535|ref|XP_002963190.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
 gi|300168458|gb|EFJ35061.1| hypothetical protein SELMODRAFT_79513 [Selaginella moellendorffii]
          Length = 573

 Score =  228 bits (582), Expect = 5e-57,   Method: Compositional matrix adjust.
 Identities = 131/457 (28%), Positives = 246/457 (53%), Gaps = 10/457 (2%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMAR----RNQIPDFHFCINLIRGLIRIDR 167
           FV  +E+T N ++   C + +LT  SK  +++      ++  PD      +I G  +   
Sbjct: 36  FVAPNERTYNVVVNGLC-KARLT--SKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 92

Query: 168 IEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           +++A ++L+ MV   G+ PD +TY  +V GLC+ G++  A  ++ EM + G EPD  T++
Sbjct: 93  MDRACEILREMVTRDGIAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 152

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
            ++    +  K  +A+  +K+ L      P ++TYT LI+  CK   + +A+++L  M  
Sbjct: 153 ALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEG 212

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
             C P++VTY+SL++  CK G  D A+ +   + S+G  PN +TY TL+H L +    DA
Sbjct: 213 RKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDA 272

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              ++D M      P   +YN L++G C+ G ++ A   F +M +K+C PD +TY  ++ 
Sbjct: 273 ARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVR 332

Query: 406 ALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             C    L EA  LL ++   +   P ++TY+ ++ G ++     +A     +M+   ++
Sbjct: 333 GFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVA 392

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P+ +T+ +LI G C+A +V+ A+++LK +  +  +     +  VI  LC+   +D A ++
Sbjct: 393 PNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL 452

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           L  M +   +P    ++T+++  +  G  E AY+L++
Sbjct: 453 LVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFE 489



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 233/453 (51%), Gaps = 9/453 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  GK+  A +++  M  +   PD      LI G     ++++A K+ 
Sbjct: 112 DVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLY 171

Query: 176 -QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            +I+  S   PD +TY  ++ G CK G +  A+ +L  M    C P+V+TY+++L  +  
Sbjct: 172 KEILTSSSWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCK 231

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G   QA+  ++    KGC P ++TYT LI  +C    +  A  ++D+M    C PD V+
Sbjct: 232 AGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVS 291

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L++  C+ G+ ++A  +   + ++   P+ ITY  L+    +    +    +L+ M 
Sbjct: 292 YNALLDGYCRLGRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMK 351

Query: 355 EASH-SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            A+   P V TY+I++ G  +      A     +M+++N  P+ VTY++++  LCK G +
Sbjct: 352 TAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRV 411

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A+++L  +      P + T+N++I  L + G M++A  L   M  +G+ P  +T+ TL
Sbjct: 412 DHAMEVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTL 471

Query: 474 IWGFCRADQVEEAVDLLKEI-------GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           + GF R  ++E A +L + +           N +   A+  +I GLCK++++D A+ V+E
Sbjct: 472 LEGFSRTGRMEIAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVE 531

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            + S   +P +     IV  +   G TEEA KL
Sbjct: 532 ELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 564



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 119/395 (30%), Positives = 207/395 (52%), Gaps = 7/395 (1%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P  +T+ +++ G CK  Q++ A+A  ++M      P+  TYN ++  +       +A   
Sbjct: 5   PTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAYEV 63

Query: 245 WKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-EGCSPDIVTYNSLVNF 301
            K ++R G    P L+TY+ +I   CKQ  + RA E+L +M   +G +PD+VTY S+V+ 
Sbjct: 64  LK-EMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVDG 122

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS-LGSRGCWDAVDKILDIMNEASHSP 360
            C+ GK D A  ++  +  +G+EP+  T++ L+     +R   +A+    +I+  +S  P
Sbjct: 123 LCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKP 182

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY  LI+G CK G +++A+     M  + C P++VTY+++L  LCK G L++AL L 
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C P ++TY TLI GL     ++ A +L  +M      PD +++  L+ G+CR 
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM-ISSRYKPDDTV 539
            ++EEA  L KE+  +        Y  ++ G C + +++ A  +LE M  ++   PD   
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +S +V   +      EA +  Q++I   V     T
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 397



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/429 (27%), Positives = 205/429 (47%), Gaps = 44/429 (10%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           VE D+ T + ++  +C+  K+ +A KL  +I+   +  PD      LI G  +   +EKA
Sbjct: 144 VEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWKPDVVTYTALIDGFCKSGNLEKA 203

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            K+L +M     VP+ +TY+ ++ GLCK G +  A+ L   M+  GC P+V+TY T++  
Sbjct: 204 MKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHG 263

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +    K   A     +     CPP  ++Y  L++  C+   I  A ++  +MA + C PD
Sbjct: 264 LCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRLGRIEEAKQLFKEMATKSCLPD 323

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNL-LSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            +TY  LV   C   + ++A  ++ N+  + G++P+ +TY+ ++        +    + +
Sbjct: 324 RITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFI 383

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M   + +P   TY+ LI+GLCK G VD A+     MV+K  +P + T+N+V+GALC+ 
Sbjct: 384 QEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMVNKRVEPSVGTFNSVIGALCRL 443

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME--------------------- 449
           G ++EA +LL  +      P ++TY TL++G ++ G ME                     
Sbjct: 444 GDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRKKAKKSSSAAN 503

Query: 450 ---------------------KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
                                KAM +  ++      P +     ++ G  RA + EEA  
Sbjct: 504 LVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGK 563

Query: 489 LLKEIGKRG 497
           L+  I K G
Sbjct: 564 LINSISKVG 572



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 96/314 (30%), Positives = 172/314 (54%), Gaps = 4/314 (1%)

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
           C P ++T+TI+I+  CK   + +A+   + M  E  +P+  TYN +VN  CK      A 
Sbjct: 3   CQPTVVTWTIIIDGFCKANQLKQALACFEKMR-EFVAPNERTYNVVVNGLCKARLTSKAY 61

Query: 313 LVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKIL-DIMNEASHSPTVFTYNILIN 370
            V+  +   + + P+ +TY+T+++    +G  D   +IL +++     +P V TY  +++
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCS 429
           GLC+ G +DRA     +M  K  +PD  T++ ++   C    ++EAL+L   +L  SS  
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P ++TY  LIDG  K G +EKAM + G M      P+ +T+ +L+ G C+A  +++A+DL
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDL 241

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            + +  +G       Y  +IHGLC + KVD A  +++ M ++   PD   ++ ++     
Sbjct: 242 FRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCR 301

Query: 550 DGMTEEAYKLWQKL 563
            G  EEA +L++++
Sbjct: 302 LGRIEEAKQLFKEM 315



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 102/391 (26%), Positives = 180/391 (46%), Gaps = 43/391 (10%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  FC  G L  A K++ +M  R  +P+     +L+ GL +   +++A  + 
Sbjct: 183 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 242

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G VP+ +TY  ++ GLC   ++ +A  L+DEM+ + C PD ++YN +L      
Sbjct: 243 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPPDTVSYNALLDGYCRL 302

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM-AIEGCSPDIVT 294
           G+ ++A   +K+   K C P  ITYT L+   C    +  A  +L++M    G  PD+VT
Sbjct: 303 GRIEEAKQLFKEMATKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 362

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ +V    +  ++ +A   I  +++R + PN++TY++L+  L   G  D   ++L  M 
Sbjct: 363 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAMEVLKNMV 422

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA-------- 406
                P+V T+N +I  LC+ G +D A      M +   +P +VTY T+L          
Sbjct: 423 NKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRME 482

Query: 407 ----------------------------------LCKEGMLNEALQLLHLLNGSSCSPCL 432
                                             LCK   +++A+ ++  L    C P  
Sbjct: 483 IAYELFEVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELRSRECEPAE 542

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
                ++DGL + G  E+A  L   + + G+
Sbjct: 543 EDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 108/205 (52%), Gaps = 37/205 (18%)

Query: 392 NCQPDIV----------------------------------TYNTVLGALCKEGMLNEAL 417
            CQP +V                                  TYN V+  LCK  + ++A 
Sbjct: 2   ECQPTVVTWTIIIDGFCKANQLKQALACFEKMREFVAPNERTYNVVVNGLCKARLTSKAY 61

Query: 418 QLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM-ENGISPDDITHRTLIW 475
           ++L  + +G S +P L+TY+T+I+G  K+G M++A  +  +M+  +GI+PD +T+ +++ 
Sbjct: 62  EVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGIAPDVVTYTSVVD 121

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL-ELMISSRYK 534
           G CR  +++ A ++++E+  +G +     +  +I G C ++KVD A+++  E++ SS +K
Sbjct: 122 GLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEILTSSSWK 181

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKL 559
           PD   ++ ++      G  E+A K+
Sbjct: 182 PDVVTYTALIDGFCKSGNLEKAMKM 206



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 55/219 (25%), Positives = 106/219 (48%), Gaps = 9/219 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T + ++  +    +  +A++ I  M  RN  P+     +LI GL +  R++ A 
Sbjct: 356 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVDHAM 415

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +VL+ MV     P   T+N ++G LC+ G +  A  LL  M+  G EP ++TY T+L   
Sbjct: 416 EVLKNMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGF 475

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLI--------TYTILIEQVCKQCGIARAIEVLDDMA 284
              G+ + A   + + +RK                ++ LI  +CK   I +A+ V++++ 
Sbjct: 476 SRTGRMEIAYELF-EVMRKKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAMAVVEELR 534

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
              C P      ++V+   + G+ ++A  +IN++   G+
Sbjct: 535 SRECEPAEEDCLAIVDGLLRAGRTEEAGKLINSISKVGL 573


>gi|115450929|ref|NP_001049065.1| Os03g0165100 [Oryza sativa Japonica Group]
 gi|113547536|dbj|BAF10979.1| Os03g0165100 [Oryza sativa Japonica Group]
          Length = 695

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 127/392 (32%), Positives = 209/392 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D ++   ++  FC  G++ +A K+   M  R   PD      LI    R  +++ A 
Sbjct: 196 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 255

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             L+ M   G VPD + Y M++GG C+ G +  A+ + DEM   GC PDV+TYNT+L  +
Sbjct: 256 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 315

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +   A G   +   +G PP L T+T LI   C +  + +A+++ D M  +   PDI
Sbjct: 316 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 375

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L++  C+QG  D A  + +++ SR + PN +TY+ L+ S   +G  +     LD 
Sbjct: 376 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 435

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P + TYN +I G C+ G V +      +M+     PD++TYNT++    KE  
Sbjct: 436 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 495

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +++A +LL+++      P ++TYN LI+G +  G +++A  ++ +M   GI PD  T+ +
Sbjct: 496 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 555

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           +I G   A   +EA  L  E+ +RG + R +A
Sbjct: 556 MINGHVTAGNSKEAFQLHDEMLQRGKEKRRAA 587



 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 237/450 (52%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T+N ++      G    A  L+D M  +   P      ++++GL R    +KA +V 
Sbjct: 129 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 188

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD  ++ +++GG C+ G+I  A+ +  EM   G +PD+++++ ++      
Sbjct: 189 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 248

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+ + ++    G  P  + YT++I   C+   ++ A+ V D+M   GC PD+VTY
Sbjct: 249 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 308

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  CK+ +  DA  ++N +  RG+ P+  T+ TL+H     G  D   ++ D M  
Sbjct: 309 NTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN 368

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN LI+G+C+ G +D+A + ++ M S+   P+ VTY+ ++ + C++G + +
Sbjct: 369 QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVED 428

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A   L  +      P ++TYN++I G  + G + K      +MM N +SPD IT+ TLI 
Sbjct: 429 AFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 488

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+ + D++ +A  LL  + K   +     Y ++I+G      V  A  + E M +   +P
Sbjct: 489 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEP 548

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   + +++      G ++EA++L  ++++
Sbjct: 549 DRYTYMSMINGHVTAGNSKEAFQLHDEMLQ 578



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 205/401 (51%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
            +K   V+  M      PD +T+N+MV    + G   +A+AL+D M   G +P ++TYN+
Sbjct: 111 FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNS 170

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           +L+ +  +G + +A   +K+    G  P + ++TILI   C+   I  A+++  +M   G
Sbjct: 171 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 230

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD+V+++ L+    ++GK D A+  +  +   G+ P+ + Y  ++      G      
Sbjct: 231 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 290

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++ D M      P V TYN L+NGLCK   +  A    N+M  +   PD+ T+ T++   
Sbjct: 291 RVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGY 350

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C EG L++ALQL   +      P ++TYNTLIDG+ ++G ++KA  L+  M    I P+ 
Sbjct: 351 CIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH 410

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+  LI   C   QVE+A   L E+  +G       Y  +I G C+S  V    + L+ 
Sbjct: 411 VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 470

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           M+ ++  PD   ++T++     +    +A+KL   + + KV
Sbjct: 471 MMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 511



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 230/451 (50%), Gaps = 2/451 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T N ++ N+C   +      +I  M +R   PD      ++    R    E A  
Sbjct: 92  EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 151

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  P  +TYN ++ GLC+ G    A  +  EM   G  PDV ++  ++    
Sbjct: 152 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 211

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+ ++A+  +K+   +G  P L++++ LI    ++  +  A+  L +M   G  PD V
Sbjct: 212 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 271

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDI 352
            Y  ++   C+ G   DA+ V + ++  G  P+ +TYNTLL+ L   R   DA + +L+ 
Sbjct: 272 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA-EGLLNE 330

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E    P + T+  LI+G C  G +D+A+  F+ M+++  +PDIVTYNT++  +C++G 
Sbjct: 331 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 390

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L++A  L   ++     P  +TY+ LID   +KG +E A     +M+  GI P+ +T+ +
Sbjct: 391 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 450

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G+CR+  V +    L+++           Y  +IHG  K  K+  A ++L +M   +
Sbjct: 451 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 510

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +PD   ++ ++   +  G  +EA  +++K+
Sbjct: 511 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 541



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 203/398 (51%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A+   +++  S    +T T N+MV   CK  +     A++ EM      PDV+T+N ++ 
Sbjct: 79  AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 138

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
             F  G  + A+      + KG  P ++TY  +++ +C+     +A EV  +M   G +P
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+ ++  L+   C+ G+ ++A+ +   +  RG++P+ ++++ L+     RG  D     L
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 258

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M      P    Y ++I G C+ GL+  A+   ++MV   C PD+VTYNT+L  LCKE
Sbjct: 259 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 318

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             L +A  LL+ +      P L T+ TLI G   +G ++KA+ L+  M+   + PD +T+
Sbjct: 319 RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 378

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            TLI G CR   +++A DL  ++  R     +  Y ++I   C+  +V+ A   L+ MI+
Sbjct: 379 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 438

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
               P+   +++I+K     G   +  K  QK++  KV
Sbjct: 439 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 476



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 171/318 (53%), Gaps = 2/318 (0%)

Query: 259 TYT--ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           TYT  I++   CK     +   V+ +M      PD+VT+N +V+   + G  + A+ +++
Sbjct: 95  TYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVD 154

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
           +++S+G++P  +TYN++L  L   G WD   ++   M++   +P V ++ ILI G C+ G
Sbjct: 155 SMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVG 214

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            ++ A+  + +M  +  +PD+V+++ ++G   + G ++ A+  L  +      P  + Y 
Sbjct: 215 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYT 274

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            +I G  + G M  A+ +  +M+  G  PD +T+ TL+ G C+  ++ +A  LL E+ +R
Sbjct: 275 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 334

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       +  +IHG C   K+D A+Q+ + M++ R +PD   ++T++  +   G  ++A
Sbjct: 335 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 394

Query: 557 YKLWQKLIEWKVFEKGTT 574
             LW  +   ++F    T
Sbjct: 395 NDLWDDMHSREIFPNHVT 412



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 88/208 (42%)

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +S +P    +++LI    +      A  +F  ++           N +L AL + G  + 
Sbjct: 19  SSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHL 78

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A     L+  S+      T N ++    K    +K   +  +M +  + PD +TH  ++ 
Sbjct: 79  AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 138

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
              RA   E A+ L+  +  +G K     Y  V+ GLC+S   D A +V + M      P
Sbjct: 139 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 198

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D   F+ ++      G  EEA K+++++
Sbjct: 199 DVRSFTILIGGFCRVGEIEEALKIYKEM 226


>gi|115446773|ref|NP_001047166.1| Os02g0565400 [Oryza sativa Japonica Group]
 gi|113536697|dbj|BAF09080.1| Os02g0565400, partial [Oryza sativa Japonica Group]
          Length = 353

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 118/339 (34%), Positives = 193/339 (56%), Gaps = 35/339 (10%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CK+ G  +A+++LD+M  +GC+PDIVTYN +VN  C++G+ DDA+  + NL S G EPN+
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           ++YN +L  L +   W+  ++++  M +    P V T+N+LI+ LC+ GLV+ A+    Q
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 388 -----------------------------------MVSKNCQPDIVTYNTVLGALCKEGM 412
                                              MVS+ C PDIV+YNT+L ALC+ G 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ A++LLH L    C+P LI+YNT+IDGL K G  ++A+ L  +M+  G+ PD IT+ T
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +  G CR D++E+A+    ++   G +     Y  +I GLCK ++   AI +   MI + 
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
             P+++ ++ +++ +A +G+ +EA  L  +L    V  K
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRK 341



 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 113/329 (34%), Positives = 193/329 (58%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           ++A K+L  M   G  PD +TYN++V G+C+ G++  AI  L  +   GCEP+ ++YN +
Sbjct: 9   KQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNTVSYNIV 68

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L+ +    +++ A     +  +KGCPP ++T+ +LI  +C++  +  A+EVL+ +   GC
Sbjct: 69  LKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQIPKYGC 128

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P+ ++YN L++  CKQ K D A+  ++ ++SRG  P+ ++YNTLL +L   G  D   +
Sbjct: 129 TPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVE 188

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  + +   +P + +YN +I+GL K G    A+   N+MVSK  QPDI+TY+T+   LC
Sbjct: 189 LLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLC 248

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           +E  + +A++    +      P  + YN +I GL K+     A+ L+  M+ NG  P++ 
Sbjct: 249 REDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNES 308

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           T+  LI G      ++EA DLL E+  RG
Sbjct: 309 TYTILIEGLAYEGLIKEARDLLDELCSRG 337



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 183/333 (54%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           CKR   + A+ LLDEM   GC PD++TYN ++  +   G+   AI F K+    GC P  
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           ++Y I+++ +C       A E++ +M  +GC P++VT+N L++F C++G  + A+ V+  
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G  PNS++YN LLH+   +   D     LD+M      P + +YN L+  LC+ G 
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           VD A+   +Q+  K C P +++YNTV+  L K G   EAL+LL+ +      P +ITY+T
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +  GL ++  +E A+  +G++ + GI P+ + +  +I G C+  +   A+DL   +   G
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
                S Y ++I GL     +  A  +L+ + S
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDELCS 335



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 181/347 (52%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C R     A KL+D M  +   PD      ++ G+ +  R++ A + L+ +   G  P+T
Sbjct: 3   CKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPNT 62

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           ++YN+++ GLC   +   A  L+ EM   GC P+V+T+N ++  +   G  + A+   + 
Sbjct: 63  VSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLEQ 122

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
             + GC P  ++Y  L+   CKQ  + +A+  LD M   GC PDIV+YN+L+   C+ G+
Sbjct: 123 IPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGE 182

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D AV +++ L  +G  P  I+YNT++  L   G      ++L+ M      P + TY+ 
Sbjct: 183 VDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYST 242

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +  GLC+   ++ AI +F ++     +P+ V YN ++  LCK    + A+ L   + G+ 
Sbjct: 243 IAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNG 302

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           C P   TY  LI+GLA +G +++A  L  ++   G+    + ++  I
Sbjct: 303 CMPNESTYTILIEGLAYEGLIKEARDLLDELCSRGVVRKSLINKGAI 349



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 76/262 (29%), Positives = 141/262 (53%)

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
           +CK+  Y  A+ +++ +  +G  P+ +TYN +++ +   G  D   + L  +      P 
Sbjct: 2   TCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEPN 61

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             +YNI++ GLC     + A     +M  K C P++VT+N ++  LC++G++  AL++L 
Sbjct: 62  TVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVLE 121

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +    C+P  ++YN L+    K+  M+KAM     M+  G  PD +++ TL+   CR+ 
Sbjct: 122 QIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSG 181

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V+ AV+LL ++  +G      +Y  VI GL K+ K   A+++L  M+S   +PD   +S
Sbjct: 182 EVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYS 241

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
           TI   +  +   E+A + + K+
Sbjct: 242 TIAAGLCREDRIEDAIRAFGKV 263



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 80/278 (28%), Positives = 145/278 (52%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  + N +L+  C+  +  DA +L+  M ++   P+      LI  L R   +E A +
Sbjct: 59  EPNTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALE 118

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL+ +   G  P++++YN ++   CK+ ++  A+A LD M   GC PD+++YNT+L  + 
Sbjct: 119 VLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALC 178

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +G+   A+        KGC P LI+Y  +I+ + K      A+E+L++M  +G  PDI+
Sbjct: 179 RSGEVDVAVELLHQLKDKGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDII 238

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY+++    C++ + +DA+     +   G+ PN++ YN ++  L  R    +   +   M
Sbjct: 239 TYSTIAAGLCREDRIEDAIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYM 298

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
                 P   TY ILI GL   GL+  A +  +++ S+
Sbjct: 299 IGNGCMPNESTYTILIEGLAYEGLIKEARDLLDELCSR 336



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 62/208 (29%), Positives = 102/208 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L  FC + K+  A   +D+M  R   PD      L+  L R   ++ A ++L  +  
Sbjct: 136 NPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRSGEVDVAVELLHQLKD 195

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  I+YN ++ GL K G+ + A+ LL+EM   G +PD+ITY+TI   +    + + 
Sbjct: 196 KGCAPVLISYNTVIDGLTKAGKTKEALELLNEMVSKGLQPDIITYSTIAAGLCREDRIED 255

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI  +      G  P  + Y  +I  +CK+     AI++   M   GC P+  TY  L+ 
Sbjct: 256 AIRAFGKVQDMGIRPNTVLYNAIILGLCKRRETHSAIDLFAYMIGNGCMPNESTYTILIE 315

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSI 328
               +G   +A  +++ L SRG+   S+
Sbjct: 316 GLAYEGLIKEARDLLDELCSRGVVRKSL 343



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 90/193 (46%), Gaps = 35/193 (18%)

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM----------------- 448
           A CK     +A++LL  +    C+P ++TYN +++G+ ++G +                 
Sbjct: 1   ATCKRSGYKQAMKLLDEMRDKGCTPDIVTYNVVVNGICQEGRVDDAIEFLKNLPSYGCEP 60

Query: 449 ------------------EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
                             E A  L G+M + G  P+ +T   LI   CR   VE A+++L
Sbjct: 61  NTVSYNIVLKGLCTAERWEDAEELMGEMGQKGCPPNVVTFNMLISFLCRKGLVEPALEVL 120

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           ++I K G    + +Y  ++H  CK KK+D A+  L+LM+S    PD   ++T++  +   
Sbjct: 121 EQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFLDLMVSRGCYPDIVSYNTLLTALCRS 180

Query: 551 GMTEEAYKLWQKL 563
           G  + A +L  +L
Sbjct: 181 GEVDVAVELLHQL 193


>gi|413948663|gb|AFW81312.1| hypothetical protein ZEAMMB73_082399 [Zea mays]
          Length = 798

 Score =  228 bits (582), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 144/522 (27%), Positives = 258/522 (49%), Gaps = 42/522 (8%)

Query: 84  VLAVNKKLRGLTITKKSHDP-----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           V + N  ++GL + KKS +       + +  G     +  + + I+  F   G++  A  
Sbjct: 165 VFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYF 224

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L D M  +   PD     +LI GL +   + KA  +LQ M   G +P+T TYN+M+ G C
Sbjct: 225 LFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYC 284

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP--- 255
             GQ+  A+ LL +MS SG +PDV+TY  +++     G+  +A   +   +RKG  P   
Sbjct: 285 SLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSMVRKGQKPNST 344

Query: 256 -YLI-------------------------------TYTILIEQVCKQCGIARAIEVLDDM 283
            Y I                                + ILI    K   + +A+    +M
Sbjct: 345 IYHILLHGYATKGALIDVRDLLDLMIRDGIPFEHRAFNILICAYAKHGAVDKAMTAFTEM 404

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G  PD+V+Y+++++  CK G+ +DAV   N ++S G+ PN I++ +L+H L S G W
Sbjct: 405 RQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTSLIHGLCSIGEW 464

Query: 344 DAVDKI-LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
             V+++  +++N   H   +F  N +++ LCK G V  A + F+ ++    +P++V+YNT
Sbjct: 465 KKVEELAFEMINRGIHPDAIFM-NTIMDNLCKEGRVVEAQDFFDMVIHIGVKPNVVSYNT 523

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C  G ++E+++    +      P   TYN L++G  K G +E A+ LY +M    
Sbjct: 524 LIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNGRVEDALALYREMFRKD 583

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +    IT   ++ G  +A ++  A +L  ++  RG ++R   Y  V+ GLC++  VD A+
Sbjct: 584 VKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVLGGLCENSCVDEAL 643

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           ++ E + S  ++ D   F+ ++  +   G  +EA  L+  ++
Sbjct: 644 RMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMV 685



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 223/451 (49%), Gaps = 39/451 (8%)

Query: 157 NLIRGLIRIDRIEKA-SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
            LI+GL    R + A   V + M   G  PD  +YN ++ GLC   + + A+ LL  M+ 
Sbjct: 134 QLIKGLCDGKRTDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTA 193

Query: 216 SG---CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ-- 270
            G   C P+V++Y+TI+   F  G+  +A   + + + +G PP ++TY+ LI+ +CK   
Sbjct: 194 DGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQA 253

Query: 271 ------------------------------CGIAR---AIEVLDDMAIEGCSPDIVTYNS 297
                                         C + +   A+ +L  M+  G  PD+VTY  
Sbjct: 254 MNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYIL 313

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+ + CK G+  +A  V ++++ +G +PNS  Y+ LLH   ++G    V  +LD+M    
Sbjct: 314 LIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIRDG 373

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
                  +NILI    K+G VD+A+ +F +M     +PD+V+Y+TV+  LCK G + +A+
Sbjct: 374 IPFEHRAFNILICAYAKHGAVDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAV 433

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
              + +     SP +I++ +LI GL   G  +K   L  +M+  GI PD I   T++   
Sbjct: 434 YHFNQMVSEGLSPNIISFTSLIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNL 493

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  +V EA D    +   G K    +Y  +I G C   K+D +I+  + M+S   +PD 
Sbjct: 494 CKEGRVVEAQDFFDMVIHIGVKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDS 553

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             ++ ++     +G  E+A  L++++    V
Sbjct: 554 WTYNALLNGYFKNGRVEDALALYREMFRKDV 584



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 223/458 (48%), Gaps = 12/458 (2%)

Query: 113 VENDEKTNNKI----LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDR 167
           V   +K N+ I    L  + ++G L D   L+D+M R + IP  H   N LI    +   
Sbjct: 335 VRKGQKPNSTIYHILLHGYATKGALIDVRDLLDLMIR-DGIPFEHRAFNILICAYAKHGA 393

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           ++KA      M  +G  PD ++Y+ ++  LCK G++  A+   ++M   G  P++I++ +
Sbjct: 394 VDKAMTAFTEMRQNGLRPDVVSYSTVIHILCKIGRVEDAVYHFNQMVSEGLSPNIISFTS 453

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +   G++K+      + + +G  P  I    +++ +CK+  +  A +  D +   G
Sbjct: 454 LIHGLCSIGEWKKVEELAFEMINRGIHPDAIFMNTIMDNLCKEGRVVEAQDFFDMVIHIG 513

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             P++V+YN+L++  C  GK D+++   + ++S G+ P+S TYN LL+     G    V+
Sbjct: 514 VKPNVVSYNTLIDGYCFVGKMDESIKQFDRMVSIGLRPDSWTYNALLNGYFKNG---RVE 570

Query: 348 KILDIMNEASHSPTVF---TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
             L +  E       F   T NI+++GL + G +  A   + +MV +  Q  I TYNTVL
Sbjct: 571 DALALYREMFRKDVKFCAITSNIILHGLFQAGRIVAARELYMKMVDRGTQLRIETYNTVL 630

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
           G LC+   ++EAL++   L        + T+N +I+ L K G +++A  L+  M+  G  
Sbjct: 631 GGLCENSCVDEALRMFEDLRSKEFELDVWTFNIVINALLKVGRIDEAKSLFSAMVLRGPV 690

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P  IT+  +I        +EE+ DL   + K G    +    ++I  L +   V  A   
Sbjct: 691 PHVITYSLMIKSRIEEGLLEESDDLFLSMEKNGCAADSHMLNVIIRRLLEKGDVRRAGTY 750

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           L  +    +  + +  + ++  V++    +E   L +K
Sbjct: 751 LTKIDEKNFSVEASTAALLIPIVSEKKYQKEVKFLPEK 788



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 88/286 (30%), Positives = 139/286 (48%), Gaps = 9/286 (3%)

Query: 274 ARAIEVLDDMAIEGC---SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           A A+ + + MA  G    + +      L+   C  G+ D A       L  G    ++T 
Sbjct: 73  ALAVSLFNTMARSGVNMMAANRYIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTL 132

Query: 331 NTLLHSL--GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           N L+  L  G R   DA+D +   M E  ++P VF+YN LI GLC       A+     M
Sbjct: 133 NQLIKGLCDGKR-TDDAMDMVFRRMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHM 191

Query: 389 VSK---NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            +    NC P++V+Y+T++    KEG +++A  L   + G    P ++TY++LIDGL K 
Sbjct: 192 TADGGYNCSPNVVSYSTIIDGFFKEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKA 251

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             M KA  +   M + G+ P+  T+  +I G+C   Q+EEAV LLK++   G +     Y
Sbjct: 252 QAMNKAEAILQHMFDKGVMPNTRTYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTY 311

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            L+I   CK  +   A  V + M+    KP+ T++  ++   A  G
Sbjct: 312 ILLIQYYCKIGRCAEARSVFDSMVRKGQKPNSTIYHILLHGYATKG 357



 Score = 82.4 bits (202), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 60/241 (24%), Positives = 109/241 (45%), Gaps = 39/241 (16%)

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK------------- 409
           +   ILI   C  G +D A  +F   +    +   VT N ++  LC              
Sbjct: 95  YIIGILIRCFCTVGRLDLAFAAFALFLKMGWRVQNVTLNQLIKGLCDGKRTDDAMDMVFR 154

Query: 410 -----------------------EGMLNEALQ-LLHLL--NGSSCSPCLITYNTLIDGLA 443
                                  E    EAL+ LLH+    G +CSP +++Y+T+IDG  
Sbjct: 155 RMPELGYTPDVFSYNALIKGLCVEKKSQEALELLLHMTADGGYNCSPNVVSYSTIIDGFF 214

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K+G ++KA  L+ +M+  G  PD +T+ +LI G C+A  + +A  +L+ +  +G      
Sbjct: 215 KEGEVDKAYFLFDEMIGQGFPPDVVTYSSLIDGLCKAQAMNKAEAILQHMFDKGVMPNTR 274

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y ++I G C   +++ A+++L+ M  S  +PD   +  +++     G   EA  ++  +
Sbjct: 275 TYNIMIRGYCSLGQLEEAVRLLKKMSGSGLQPDVVTYILLIQYYCKIGRCAEARSVFDSM 334

Query: 564 I 564
           +
Sbjct: 335 V 335


>gi|79317869|ref|NP_001031033.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75178969|sp|Q9LPX2.1|PPR39_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12775, mitochondrial; Flags: Precursor
 gi|8698724|gb|AAF78482.1|AC012187_2 Contains similarity to an unknown protein F16M19.7 gi|6598837 from
           Arabidopsis thaliana BAC F16M19 gb|AC010795 and contains
           multiple PPR PF|01535 repeats. EST gb|AI999079 comes
           from this gene [Arabidopsis thaliana]
 gi|332190806|gb|AEE28927.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 644

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 124/439 (28%), Positives = 231/439 (52%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           FC   KL+ A   +  + +    PD      L+ GL    R+ +A +++  MV  G  P 
Sbjct: 133 FCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEALELVDRMVEMGHKPT 192

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            IT N +V GLC  G++  A+ L+D M  +G +P+ +TY  +L  M  +G+   A+   +
Sbjct: 193 LITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLR 252

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
               +      + Y+I+I+ +CK   +  A  + ++M I+G   DI+TYN+L+   C  G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAG 312

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           ++DD   ++ +++ R + PN +T++ L+ S    G     D++L  M +   +P   TYN
Sbjct: 313 RWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYN 372

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI+G CK   ++ AI   + M+SK C PDI+T+N ++   CK   +++ L+L   ++  
Sbjct: 373 SLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREMSLR 432

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
                 +TYNTL+ G  + G +E A  L+ +M+   + PD ++++ L+ G C   ++E+A
Sbjct: 433 GVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEKA 492

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           +++  +I K   ++    Y ++IHG+C + KVD A  +   +     K D   ++ ++ +
Sbjct: 493 LEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMISE 552

Query: 547 VADDGMTEEAYKLWQKLIE 565
           +       +A  L++K+ E
Sbjct: 553 LCRKDSLSKADILFRKMTE 571



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 127/446 (28%), Positives = 224/446 (50%), Gaps = 36/446 (8%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L  GL+ I + + A  + + M+ S  +P  I +N +   + K  Q    +AL  +M   G
Sbjct: 60  LSSGLVGI-KADDAVDLFRDMIQSRPLPTVIDFNRLFSAIAKTKQYELVLALCKQMESKG 118

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
               + T + ++       K   A       ++ G  P  + +  L+  +C +C ++ A+
Sbjct: 119 IAHSIYTLSIMINCFCRCRKLSYAFSTMGKIMKLGYEPDTVIFNTLLNGLCLECRVSEAL 178

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E++D M   G  P ++T N+LVN  C  GK  DAV++I+ ++  G +PN +TY  +L+ +
Sbjct: 179 ELVDRMVEMGHKPTLITLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVM 238

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      ++L  M E +       Y+I+I+GLCK G +D A N FN+M  K  + DI
Sbjct: 239 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADI 298

Query: 398 VTYNTVLGALC-----------------------------------KEGMLNEALQLLHL 422
           +TYNT++G  C                                   KEG L EA QLL  
Sbjct: 299 ITYNTLIGGFCNAGRWDDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKE 358

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P  ITYN+LIDG  K+  +E+A+ +   M+  G  PD +T   LI G+C+A++
Sbjct: 359 MMQRGIAPNTITYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANR 418

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +++ ++L +E+  RG       Y  ++ G C+S K+++A ++ + M+S R +PD   +  
Sbjct: 419 IDDGLELFREMSLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKI 478

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++  + D+G  E+A +++ K+ + K+
Sbjct: 479 LLDGLCDNGELEKALEIFGKIEKSKM 504



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 220/429 (51%), Gaps = 6/429 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK++DA  LID M      P+      ++  + +  +   A ++L+ M
Sbjct: 195 TLNTLVNGLCLNGKVSDAVVLIDRMVETGFQPNEVTYGPVLNVMCKSGQTALAMELLRKM 254

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                  D + Y++++ GLCK G + +A  L +EM + G + D+ITYNT++    + G++
Sbjct: 255 EERNIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIITYNTLIGGFCNAGRW 314

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
                  +D +++   P ++T+++LI+   K+  +  A ++L +M   G +P+ +TYNSL
Sbjct: 315 DDGAKLLRDMIKRKISPNVVTFSVLIDSFVKEGKLREADQLLKEMMQRGIAPNTITYNSL 374

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+ + ++A+ +++ ++S+G +P+ +T+N L++        + +D  L++  E S 
Sbjct: 375 IDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCK---ANRIDDGLELFREMSL 431

Query: 359 SPTV---FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +    TYN L+ G C+ G ++ A   F +MVS+  +PDIV+Y  +L  LC  G L +
Sbjct: 432 RGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGELEK 491

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL++   +  S     +  Y  +I G+     ++ A  L+  +   G+  D   +  +I 
Sbjct: 492 ALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIMIS 551

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             CR D + +A  L +++ + G+      Y ++I           A +++E M SS +  
Sbjct: 552 ELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGFPA 611

Query: 536 DDTVFSTIV 544
           D +    ++
Sbjct: 612 DVSTVKMVI 620



 Score = 93.6 bits (231), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 61/256 (23%), Positives = 115/256 (44%), Gaps = 35/256 (13%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC   +L +A +++D+M  +   PD      LI G  + +RI+   ++ + M
Sbjct: 370 TYNSLIDGFCKENRLEEAIQMVDLMISKGCDPDIMTFNILINGYCKANRIDDGLELFREM 429

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G + +T+TYN +V G C+ G++  A  L  EM      PD+++Y  +L  + DNG+ 
Sbjct: 430 SLRGVIANTVTYNTLVQGFCQSGKLEVAKKLFQEMVSRRVRPDIVSYKILLDGLCDNGEL 489

Query: 239 KQAIGFW----KDQLRKGCPPYLI-------------------------------TYTIL 263
           ++A+  +    K ++      Y+I                                Y I+
Sbjct: 490 EKALEIFGKIEKSKMELDIGIYMIIIHGMCNASKVDDAWDLFCSLPLKGVKLDARAYNIM 549

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I ++C++  +++A  +   M  EG +PD +TYN L+           A  +I  + S G 
Sbjct: 550 ISELCRKDSLSKADILFRKMTEEGHAPDELTYNILIRAHLGDDDATTAAELIEEMKSSGF 609

Query: 324 EPNSITYNTLLHSLGS 339
             +  T   +++ L S
Sbjct: 610 PADVSTVKMVINMLSS 625


>gi|225451352|ref|XP_002274891.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 577

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 246/511 (48%), Gaps = 39/511 (7%)

Query: 94  LTITKKSHDPSLPS----SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI 149
           ++ITK  H  ++ S     D   +  +  T N ++ +FC   +L  A  ++  + +    
Sbjct: 67  ISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQ 126

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P+      LIRGL    +I +   +   M+  G  P+ +TY  ++ GLCK G   +AI L
Sbjct: 127 PNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRL 186

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L  M    C+PDV+ Y +I+ ++  + +  QA   + + + +G  P + TY  LI  +C 
Sbjct: 187 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCN 246

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
            C       +L++M      P++V ++++V+  CK+GK  +A  V++ ++ RG+EPN +T
Sbjct: 247 LCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVT 306

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YN L+     R   D   K+ D M     +P V +Y+ LING CK   +++A+  F +M 
Sbjct: 307 YNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMC 366

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLH---------------------------- 421
            K   P+ VTY+T++  LC  G L +A+ L H                            
Sbjct: 367 RKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLD 426

Query: 422 -------LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
                   + GS+  P +  Y  +IDG+ + G +E A  L+  +   G+ P+  T+  +I
Sbjct: 427 EAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMI 486

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+   + EA  L  E+ ++G       Y L+  G  ++ +    IQ+L+ M++  + 
Sbjct: 487 NGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 546

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            D +  + +V+ ++DDG+ +   ++  + ++
Sbjct: 547 ADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 577



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 222/405 (54%), Gaps = 3/405 (0%)

Query: 162 LIRIDRIEKASKVLQI--MVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
           LI I +++  S VL +   + S G+P  I T N+++   C   ++  A ++L ++   G 
Sbjct: 66  LISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGH 125

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
           +P++ T+NT++R +   GK  + +  +   + +G  P ++TY  LI  +CK    + AI 
Sbjct: 126 QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIR 185

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           +L  M    C PD+V Y S+++  CK  +   A  + + ++ +G+ P+  TYN+L+H+L 
Sbjct: 186 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALC 245

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
           +   W  V  +L+ M  +   P V  ++ +++ LCK G V  A +  + M+ +  +P++V
Sbjct: 246 NLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVV 305

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           TYN ++   C    ++EA+++   +     +P +++Y+TLI+G  K   +EKAM L+ +M
Sbjct: 306 TYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM 365

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
               + P+ +T+ TL+ G C   ++++A+ L  E+  RG      +Y +++  LCK++++
Sbjct: 366 CRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRL 425

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D AI +L+ +  S   PD  +++ ++  +   G  E A  L+  L
Sbjct: 426 DEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL 470



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 194/383 (50%), Gaps = 8/383 (2%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P    +  ++  + K     + ++L  +M   G  P++ T N ++ +     +   A   
Sbjct: 57  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 116

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
               L+ G  P + T+  LI  +C +  I   + + D M  EG  P++VTY +L+N  CK
Sbjct: 117 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 176

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILDIMNEASH---SP 360
            G    A+ ++ ++     +P+ + Y +++ SL    C D  V +  ++ +E  H   SP
Sbjct: 177 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSL----CKDRQVTQAFNLFSEMIHQGISP 232

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           ++FTYN LI+ LC            N+MV+    P++V ++TV+ ALCKEG + EA  ++
Sbjct: 233 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 292

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            ++      P ++TYN L+DG   +  M++A+ ++  M+  G +PD +++ TLI G+C+ 
Sbjct: 293 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 352

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++E+A+ L +E+ ++        Y  ++HGLC   ++  AI +   M++    PD   +
Sbjct: 353 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 412

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
             ++  +  +   +EA  L + +
Sbjct: 413 CILLDYLCKNRRLDEAIALLKAI 435



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 158/340 (46%)

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           ++NT      +      A+  +   L    PP +  +T L+  + K    +  + +   M
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G  P+I T N L+N  C   +   A  V+  +L  G +PN  T+NTL+  L   G  
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             V  + D M      P V TY  LINGLCK G    AI     M   NCQPD+V Y ++
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + +LCK+  + +A  L   +     SP + TYN+LI  L      +    L  +M+ + I
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 265

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P+ +   T++   C+  +V EA D++  + KRG +     Y  ++ G C   ++D A++
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 325

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           V + M+   + PD   +ST++         E+A  L++++
Sbjct: 326 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM 365



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 131/275 (47%)

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           ++N+  + S      DDA+   N +L     P+   +  LL S+     +  V  +   M
Sbjct: 26  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 85

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +     P ++T NILIN  C    +  A +   +++    QP+I T+NT++  LC EG +
Sbjct: 86  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 145

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            E L L   + G    P ++TY TLI+GL K G    A+ L   M +    PD + + ++
Sbjct: 146 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 205

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I   C+  QV +A +L  E+  +G       Y  +IH LC   +      +L  M++S+ 
Sbjct: 206 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 265

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            P+  +FST+V  +  +G   EA+ +   +I+  V
Sbjct: 266 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 300


>gi|147771991|emb|CAN69054.1| hypothetical protein VITISV_022964 [Vitis vinifera]
          Length = 586

 Score =  228 bits (581), Expect = 6e-57,   Method: Compositional matrix adjust.
 Identities = 134/511 (26%), Positives = 246/511 (48%), Gaps = 39/511 (7%)

Query: 94  LTITKKSHDPSLPS----SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI 149
           ++ITK  H  ++ S     D   +  +  T N ++ +FC   +L  A  ++  + +    
Sbjct: 76  ISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQ 135

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P+      LIRGL    +I +   +   M+  G  P+ +TY  ++ GLCK G   +AI L
Sbjct: 136 PNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRL 195

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L  M    C+PDV+ Y +I+ ++  + +  QA   + + + +G  P + TY  LI  +C 
Sbjct: 196 LRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCN 255

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
            C       +L++M      P++V ++++V+  CK+GK  +A  V++ ++ RG+EPN +T
Sbjct: 256 LCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVT 315

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YN L+     R   D   K+ D M     +P V +Y+ LING CK   +++A+  F +M 
Sbjct: 316 YNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEMC 375

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLH---------------------------- 421
            K   P+ VTY+T++  LC  G L +A+ L H                            
Sbjct: 376 RKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRLD 435

Query: 422 -------LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
                   + GS+  P +  Y  +IDG+ + G +E A  L+  +   G+ P+  T+  +I
Sbjct: 436 EAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNLSSKGLHPNVWTYTIMI 495

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+   + EA  L  E+ ++G       Y L+  G  ++ +    IQ+L+ M++  + 
Sbjct: 496 NGLCQQGLLAEASKLFGEMKRKGYSPNGCTYNLITRGFLRNNETLRGIQLLQEMLARGFS 555

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            D +  + +V+ ++DDG+ +   ++  + ++
Sbjct: 556 ADVSTSTVLVEMLSDDGLDQSVKQILSEFLQ 586



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 113/405 (27%), Positives = 222/405 (54%), Gaps = 3/405 (0%)

Query: 162 LIRIDRIEKASKVLQI--MVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
           LI I +++  S VL +   + S G+P  I T N+++   C   ++  A ++L ++   G 
Sbjct: 75  LISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGH 134

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
           +P++ T+NT++R +   GK  + +  +   + +G  P ++TY  LI  +CK    + AI 
Sbjct: 135 QPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIR 194

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           +L  M    C PD+V Y S+++  CK  +   A  + + ++ +G+ P+  TYN+L+H+L 
Sbjct: 195 LLRSMEQGNCQPDVVVYTSIIDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALC 254

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
           +   W  V  +L+ M  +   P V  ++ +++ LCK G V  A +  + M+ +  +P++V
Sbjct: 255 NLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVV 314

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           TYN ++   C    ++EA+++   +     +P +++Y+TLI+G  K   +EKAM L+ +M
Sbjct: 315 TYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM 374

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
               + P+ +T+ TL+ G C   ++++A+ L  E+  RG      +Y +++  LCK++++
Sbjct: 375 CRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSYCILLDYLCKNRRL 434

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D AI +L+ +  S   PD  +++ ++  +   G  E A  L+  L
Sbjct: 435 DEAIALLKAIEGSNMDPDIQIYTIVIDGMCRAGELEAARDLFSNL 479



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 194/383 (50%), Gaps = 8/383 (2%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P    +  ++  + K     + ++L  +M   G  P++ T N ++ +     +   A   
Sbjct: 66  PSIADFTKLLISITKMKHYSTVLSLSHQMDSFGIPPNIYTLNILINSFCHLQRLGFAFSV 125

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
               L+ G  P + T+  LI  +C +  I   + + D M  EG  P++VTY +L+N  CK
Sbjct: 126 LAKILKLGHQPNIATFNTLIRGLCVEGKIGEVLHLFDKMIGEGFQPNVVTYGTLINGLCK 185

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILDIMNEASH---SP 360
            G    A+ ++ ++     +P+ + Y +++ SL    C D  V +  ++ +E  H   SP
Sbjct: 186 VGSTSAAIRLLRSMEQGNCQPDVVVYTSIIDSL----CKDRQVTQAFNLFSEMIHQGISP 241

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           ++FTYN LI+ LC            N+MV+    P++V ++TV+ ALCKEG + EA  ++
Sbjct: 242 SIFTYNSLIHALCNLCEWKHVTALLNEMVNSKIMPNVVIFSTVVDALCKEGKVMEAHDVV 301

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            ++      P ++TYN L+DG   +  M++A+ ++  M+  G +PD +++ TLI G+C+ 
Sbjct: 302 DMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVKVFDTMVCKGFAPDVVSYSTLINGYCKI 361

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++E+A+ L +E+ ++        Y  ++HGLC   ++  AI +   M++    PD   +
Sbjct: 362 QRIEKAMYLFEEMCRKELIPNTVTYSTLMHGLCHVGRLQDAIALFHEMVTRGQIPDFVSY 421

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
             ++  +  +   +EA  L + +
Sbjct: 422 CILLDYLCKNRRLDEAIALLKAI 444



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 158/340 (46%)

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           ++NT      +      A+  +   L    PP +  +T L+  + K    +  + +   M
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G  P+I T N L+N  C   +   A  V+  +L  G +PN  T+NTL+  L   G  
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             V  + D M      P V TY  LINGLCK G    AI     M   NCQPD+V Y ++
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + +LCK+  + +A  L   +     SP + TYN+LI  L      +    L  +M+ + I
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 274

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P+ +   T++   C+  +V EA D++  + KRG +     Y  ++ G C   ++D A++
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGVEPNVVTYNALMDGHCLRSEMDEAVK 334

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           V + M+   + PD   +ST++         E+A  L++++
Sbjct: 335 VFDTMVCKGFAPDVVSYSTLINGYCKIQRIEKAMYLFEEM 374



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 77/275 (28%), Positives = 131/275 (47%)

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           ++N+  + S      DDA+   N +L     P+   +  LL S+     +  V  +   M
Sbjct: 35  SHNTFHSKSLNFNTLDDALSSFNRMLHMHPPPSIADFTKLLISITKMKHYSTVLSLSHQM 94

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +     P ++T NILIN  C    +  A +   +++    QP+I T+NT++  LC EG +
Sbjct: 95  DSFGIPPNIYTLNILINSFCHLQRLGFAFSVLAKILKLGHQPNIATFNTLIRGLCVEGKI 154

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            E L L   + G    P ++TY TLI+GL K G    A+ L   M +    PD + + ++
Sbjct: 155 GEVLHLFDKMIGEGFQPNVVTYGTLINGLCKVGSTSAAIRLLRSMEQGNCQPDVVVYTSI 214

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I   C+  QV +A +L  E+  +G       Y  +IH LC   +      +L  M++S+ 
Sbjct: 215 IDSLCKDRQVTQAFNLFSEMIHQGISPSIFTYNSLIHALCNLCEWKHVTALLNEMVNSKI 274

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            P+  +FST+V  +  +G   EA+ +   +I+  V
Sbjct: 275 MPNVVIFSTVVDALCKEGKVMEAHDVVDMMIKRGV 309


>gi|302784788|ref|XP_002974166.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
 gi|300158498|gb|EFJ25121.1| hypothetical protein SELMODRAFT_100825 [Selaginella moellendorffii]
          Length = 647

 Score =  228 bits (581), Expect = 7e-57,   Method: Compositional matrix adjust.
 Identities = 136/491 (27%), Positives = 235/491 (47%), Gaps = 41/491 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +    +L   C  G+L  A  L+D M     +  F   IN   GL R  R+++A  VL
Sbjct: 8   DTRVCTALLNGLCKTGQLDRAMLLLDEMPCSPDMVAFTVVIN---GLCREKRLDEAFSVL 64

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  V +G  PD +TYN+ + GLCK  ++  A  LL +M    C P  +TY  ++  +   
Sbjct: 65  ERAVRAGCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTALVDGLLKA 124

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A+   +  + KG  P L TYT++I+ + K   +  A  +  DM   GC PD   Y
Sbjct: 125 GRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDMLGNGCRPDAFVY 184

Query: 296 NSLVNFSCKQGKYDDAVLVINNLL----SRGMEPNSITYNTLLHSLGSRG-------CWD 344
            +L++   K GK D+A++ +N ++    +RG+EP+ + +N ++  L + G        +D
Sbjct: 185 TALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCASGNLEDALAYFD 244

Query: 345 AVDKILDI---------------------------MNEASHSPTVFTYNILINGLCKYGL 377
            +D  LD+                           M+E    PT+FTY  L++G  K G 
Sbjct: 245 ELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGR 304

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +D A+    + V +   PD VTY +++  LCK G + E  +  H +      P  +TY  
Sbjct: 305 LDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAA 364

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LIDG  K   + KA  +Y QM+++G     +T+  ++ G C+A +V EA      + +RG
Sbjct: 365 LIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERG 424

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y  ++ G C    V  A+++   M+    +P+   ++ I++ +   G   +AY
Sbjct: 425 CVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAY 484

Query: 558 KLWQKLIEWKV 568
             ++KL++ ++
Sbjct: 485 FYFEKLLQRRL 495



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 123/484 (25%), Positives = 237/484 (48%), Gaps = 39/484 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++      G+L +A  +++ M  +   P       +I GL +  R+E+A ++   M
Sbjct: 113 TYTALVDGLLKAGRLDEAMAILEQMVEKGNSPTLKTYTVVIDGLSKAGRVEEARRIFVDM 172

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC----EPDVITYNTILRTMFD 234
           + +G  PD   Y  ++ GL K G++  A+  L++M  +GC    EPDV+ +N ++R +  
Sbjct: 173 LGNGCRPDAFVYTALISGLAKIGKLDEALVYLNQMVENGCARGVEPDVVIHNLVIRQLCA 232

Query: 235 NG----------------------------------KFKQAIGFWKDQLRKGCPPYLITY 260
           +G                                  + ++AI F K    + C P L TY
Sbjct: 233 SGNLEDALAYFDELDDSLDLTHFTFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTY 292

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           T L++   K   +  A+  L +    G  PD VTY S+++  CK G+ ++     + + +
Sbjct: 293 TSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRN 352

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           RG EP+++TY  L+             ++   M ++    +  TYNI+++GLCK G V  
Sbjct: 353 RGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAE 412

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A  +F  M  + C   +VTY+ ++   C EG ++ A++L   +    C P L++YN +I 
Sbjct: 413 AYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIR 472

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC-RADQVEEAVDLLKEIGKRGNK 499
           GL + G + KA   + ++++  + PD  T  + + G C R D V + V+L + +  +G  
Sbjct: 473 GLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRLDTVGDGVELFESMVSQGTS 532

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
               +Y +++ G+C++  +++ +++   M+S    PD  VF+T+++ +   G  +EA ++
Sbjct: 533 PNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEV 592

Query: 560 WQKL 563
           +++L
Sbjct: 593 FREL 596



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 109/394 (27%), Positives = 190/394 (48%), Gaps = 41/394 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   +  +A   +  M+ R   P      +L+ G +++ R+++A   L+  
Sbjct: 256 TFNPLVAALCKAERTEEAIAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEA 315

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY------------- 225
           V  G +PD +TY  ++ GLCK G++        EM   G EPD +TY             
Sbjct: 316 VERGFIPDAVTYTSIIDGLCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMI 375

Query: 226 ----------------------NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                                 N IL  +   G+  +A   +     +GC   ++TY+ L
Sbjct: 376 PKAHRVYRQMLQSGTVVSTVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSAL 435

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           ++  C +  ++ A+E+   M   GC P++V+YN ++   C+ GK   A      LL R +
Sbjct: 436 MDGFCSEGNVSAAVELFRRMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRL 495

Query: 324 EPNSITYNTLLHSLGSR--GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            P+  T+N+ LH L  R     D V+ + + M     SP + +Y+IL++G+C+ G ++  
Sbjct: 496 CPDVYTFNSFLHGLCQRLDTVGDGVE-LFESMVSQGTSPNLHSYSILMDGICRAGGLEVT 554

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +  F++MVS+   PD+V +NT++  LC  G ++EAL++   L   S +P   +Y +L+D 
Sbjct: 555 LEIFHEMVSRGVAPDVVVFNTLIRWLCIAGRVDEALEVFRELERRS-APDAWSYWSLLDA 613

Query: 442 LAKKGCMEKAMVLYGQMMENGISPD--DITHRTL 473
           L++   ME+A +L   M   G +P   D+T R L
Sbjct: 614 LSRCERMEEARLLSFHMKLQGCAPRHYDLTVRFL 647



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 191/386 (49%), Gaps = 4/386 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           VE D   +N +++  C+ G L DA    D +   + +   HF  N L+  L + +R E+A
Sbjct: 216 VEPDVVIHNLVIRQLCASGNLEDALAYFDEL--DDSLDLTHFTFNPLVAALCKAERTEEA 273

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
              ++ M      P   TY  +V G  K G++  A+  L E    G  PD +TY +I+  
Sbjct: 274 IAFVKKMSERRCFPTLFTYTSLVDGFLKLGRLDEALLQLKEAVERGFIPDAVTYTSIIDG 333

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   G+ ++    + +   +G  P  +TY  LI+   K   I +A  V   M   G    
Sbjct: 334 LCKLGRVEEGCERFHEMRNRGYEPDAVTYAALIDGFMKAKMIPKAHRVYRQMLQSGTVVS 393

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            VTYN +++  CK G+  +A      +  RG     +TY+ L+    S G   A  ++  
Sbjct: 394 TVTYNIILDGLCKAGRVAEAYATFLAMEERGCVATVVTYSALMDGFCSEGNVSAAVELFR 453

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE- 410
            M +    P + +YNI+I GLC+ G + +A   F +++ +   PD+ T+N+ L  LC+  
Sbjct: 454 RMLDRGCEPNLVSYNIIIRGLCRAGKLAKAYFYFEKLLQRRLCPDVYTFNSFLHGLCQRL 513

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             + + ++L   +     SP L +Y+ L+DG+ + G +E  + ++ +M+  G++PD +  
Sbjct: 514 DTVGDGVELFESMVSQGTSPNLHSYSILMDGICRAGGLEVTLEIFHEMVSRGVAPDVVVF 573

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKR 496
            TLI   C A +V+EA+++ +E+ +R
Sbjct: 574 NTLIRWLCIAGRVDEALEVFRELERR 599



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/106 (27%), Positives = 56/106 (52%), Gaps = 3/106 (2%)

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            L+ G C+  Q++ A+ LL E+    + +   A+ +VI+GLC+ K++D A  VLE  + +
Sbjct: 14  ALLNGLCKTGQLDRAMLLLDEMPCSPDMV---AFTVVINGLCREKRLDEAFSVLERAVRA 70

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
             +PD   ++  +  +      ++A++L +K+ E K      T  A
Sbjct: 71  GCEPDYVTYNVFIDGLCKAERVDDAFQLLKKMDEKKCLPTTVTYTA 116


>gi|222634970|gb|EEE65102.1| hypothetical protein OsJ_20158 [Oryza sativa Japonica Group]
          Length = 552

 Score =  228 bits (580), Expect = 8e-57,   Method: Compositional matrix adjust.
 Identities = 141/497 (28%), Positives = 242/497 (48%), Gaps = 51/497 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C+RG+L +A  ++  M      P+      L+    R   ++ A +V+ +M
Sbjct: 12  TYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGELDGAERVVSLM 71

Query: 179 VMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
              G   P+ +T+N MV GLCK G++  A  + DEM   G  PDV++YNT+L      G 
Sbjct: 72  REEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYNTLLSGYCKVGC 131

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +++  + +  ++G  P ++T+T LI   CK   + +A+ ++  M   G   + VT+ +
Sbjct: 132 LHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRERGLRMNEVTFTA 191

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  CK+G  DDA+L +  +   G++P+ + YN L++     G  D   +++  M    
Sbjct: 192 LIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLARELIREMEAKR 251

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TY+ +I+G CK G +D A     +M+ K   PD +TY++++  LC+E  LN+A 
Sbjct: 252 VKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRGLCEEKRLNDAC 311

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L   +      P   TY TLIDG  K+G +EKA+ L+ +M+  G+ PD +T+  LI G 
Sbjct: 312 ELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGL 371

Query: 478 CRADQVEEAVDLL-------------------------------------------KEIG 494
            ++ + +EA  LL                                           KE  
Sbjct: 372 SKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEAD 431

Query: 495 K-------RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           K       R  K+  S Y ++IHG C+   V  A+   + M+ S + P+ T   ++V+ +
Sbjct: 432 KVYQSMLDRNWKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGL 491

Query: 548 ADDGMTEEAYKLWQKLI 564
            ++GM  EA    Q L+
Sbjct: 492 FEEGMVVEADNAIQDLL 508



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 128/444 (28%), Positives = 230/444 (51%), Gaps = 18/444 (4%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M R    P+ +    L+R L    R+E+A  V+  M  +G  P+ +TYN +V   C+ G+
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 203 IRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           +  A  ++  M   G  +P+++T+N+++  +   G+ + A   + + +R+G  P +++Y 
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            L+   CK   +  ++ V  +M   G  PD+VT+ SL++ +CK G  + AV ++  +  R
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G+  N +T+  L+     +G  D     ++ M +    P+V  YN LING CK G +D A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
                +M +K  +PD+VTY+T++   CK G L+ A QL   +      P  ITY++LI G
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L ++  +  A  L+  M++ G+ PD+ T+ TLI G C+   VE+A+ L  E+ ++G    
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS---------------TIVKK 546
              Y ++I+GL KS +   A ++L  +      PD+  +                 ++K 
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420

Query: 547 VADDGMTEEAYKLWQKLIE--WKV 568
               G+ +EA K++Q +++  WK+
Sbjct: 421 FCMKGLMKEADKVYQSMLDRNWKL 444



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 96/293 (32%), Positives = 170/293 (58%), Gaps = 1/293 (0%)

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G +P++ TYN LV   C +G+ ++AV V+ ++   G  PN++TYNTL+ +    G 
Sbjct: 1   MVRHGVAPNVYTYNILVRALCARGRLEEAVGVVGDMRGAGCAPNAVTYNTLVAAFCRAGE 60

Query: 343 WDAVDKILDIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
            D  ++++ +M E  ++ P + T+N ++NGLCK G ++ A   F++MV +   PD+V+YN
Sbjct: 61  LDGAERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAPDVVSYN 120

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           T+L   CK G L+E+L +   +      P ++T+ +LI    K G +E+A+ L  QM E 
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G+  +++T   LI GFC+   +++A+  ++E+ K G +     Y  +I+G CK  ++D+A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            +++  M + R KPD   +STI+      G  + A++L QK+++  V     T
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAIT 293



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 109/454 (24%), Positives = 207/454 (45%), Gaps = 39/454 (8%)

Query: 68  DRVNEVDQDEWSSESHVLAVNKKLRGLTIT------KKSHDPSLPSSDGPFVENDEKTNN 121
           +RV  + ++E +++ +++  N  + GL         +K  D  +     P    D  + N
Sbjct: 65  ERVVSLMREEGNAKPNLVTFNSMVNGLCKAGRMEGARKVFDEMVREGLAP----DVVSYN 120

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
            +L  +C  G L ++  +   M +R  +PD     +LI    +   +E+A  ++  M   
Sbjct: 121 TLLSGYCKVGCLHESLAVFSEMTQRGLVPDVVTFTSLIHATCKAGNLEQAVALVAQMRER 180

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   + +T+  ++ G CK+G +  A+  ++EM   G +P V+ YN ++      G+   A
Sbjct: 181 GLRMNEVTFTALIDGFCKKGFLDDALLAVEEMRKCGIQPSVVCYNALINGYCKLGRMDLA 240

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
               ++   K   P ++TY+ +I   CK   +  A ++   M  +G  PD +TY+SL+  
Sbjct: 241 RELIREMEAKRVKPDVVTYSTIISGYCKVGNLDSAFQLNQKMLKKGVLPDAITYSSLIRG 300

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C++ + +DA  +  N+L  G++P+  TY TL+      G  +    + D M      P 
Sbjct: 301 LCEEKRLNDACELFENMLQLGVQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPD 360

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN---------------TVLGA 406
           V TY++LINGL K      A     ++  ++  PD + Y+                +L  
Sbjct: 361 VVTYSVLINGLSKSARTKEAHRLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKG 420

Query: 407 LCKEGMLNEALQLLHL-------LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
            C +G++ EA ++          L+GS        Y+ LI G  + G + KA+  + QM+
Sbjct: 421 FCMKGLMKEADKVYQSMLDRNWKLDGS-------VYSILIHGHCRGGNVRKALSFHKQML 473

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            +G SP+  +  +L+ G      V EA + ++++
Sbjct: 474 RSGFSPNSTSTISLVRGLFEEGMVVEADNAIQDL 507



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 54/232 (23%), Positives = 98/232 (42%), Gaps = 19/232 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ DE T   ++   C  G +  A  L D M R+  +PD      LI GL +  R ++A 
Sbjct: 322 VQPDEFTYTTLIDGHCKEGNVEKALSLHDEMIRKGVLPDVVTYSVLINGLSKSARTKEAH 381

Query: 173 KVLQIMVMSGGVPDTITYNMM---------------VGGLCKRGQIRSAIALLDEMSVSG 217
           ++L  +     VPD I Y+ +               + G C +G ++ A  +   M    
Sbjct: 382 RLLFKLYHEDPVPDNIKYDALMLCCSKAEFKSVVALLKGFCMKGLMKEADKVYQSMLDRN 441

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            + D   Y+ ++      G  ++A+ F K  LR G  P   +   L+  + ++  +  A 
Sbjct: 442 WKLDGSVYSILIHGHCRGGNVRKALSFHKQMLRSGFSPNSTSTISLVRGLFEEGMVVEAD 501

Query: 278 EVLDDMAIEGCSP--DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
             + D+    C P  D     +L++ + K+G  D  + V+  +   G+ P+S
Sbjct: 502 NAIQDLLT--CCPLADAEASKALIDLNRKEGNVDALIDVLCGMARDGLLPSS 551


>gi|449448914|ref|XP_004142210.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
 gi|449525343|ref|XP_004169677.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Cucumis sativus]
          Length = 768

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 133/451 (29%), Positives = 229/451 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D +  N +L       KL         M RR    D      LI+ L +  ++  A 
Sbjct: 164 IKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAI 223

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +++ M   G  PD  T+  ++ G  + G +  A+ + ++M   GC    +T N ++   
Sbjct: 224 LMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGALRIKEQMVEYGCPCTDVTVNVLINGF 283

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  QA+ F ++ + +G  P   TY  L+  +CK      A+EV+D M + G  PDI
Sbjct: 284 CKQGRIDQALSFIQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDI 343

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYNSL++  CK G+ ++AV +++ ++SR   PN++TYN ++ SL      D   +I  +
Sbjct: 344 YTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARL 403

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +      P V T+N LI GLC       A++ F +M  K C+PD  TYN ++ +LC    
Sbjct: 404 LTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRK 463

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L EAL LL  +  + C+  ++ YNTLIDG  K   +E+A  ++ +M   G+S D +T+ T
Sbjct: 464 LEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNT 523

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C++ +VE+A  L+ ++   G +     Y  ++   CK+  +  A  +++ M SS 
Sbjct: 524 LIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSG 583

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             PD   ++T++  +   G  + A +L + +
Sbjct: 584 CNPDIVTYATLISGLCKAGRVQVASRLLRSI 614



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/437 (29%), Positives = 217/437 (49%), Gaps = 2/437 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKV 174
           DE T   I+Q +   G L  A ++ + M      P     +N LI G  +  RI++A   
Sbjct: 237 DETTFTTIMQGYIEGGNLDGALRIKEQMVEYG-CPCTDVTVNVLINGFCKQGRIDQALSF 295

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           +Q  V  G  PD  TYN +V GLCK G  + A+ ++D M + G +PD+ TYN+++  +  
Sbjct: 296 IQEAVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCK 355

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+ ++A+      + + C P  +TY  +I  +CK+  +  A E+   +  +G  PD+ T
Sbjct: 356 LGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCT 415

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +NSL+   C    +  A+ +   +  +G  P+  TYN L+ SL S    +    +L  M 
Sbjct: 416 FNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEME 475

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               +  V  YN LI+G CK   ++ A   F++M  +    D VTYNT++  LCK   + 
Sbjct: 476 LNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVE 535

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A QL+  +      P   TYN+L+    K G ++KA  +   M  +G +PD +T+ TLI
Sbjct: 536 DAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQTMTSSGCNPDIVTYATLI 595

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+A +V+ A  LL+ I  +G  +   AY  VI  L K  +   A+++   M+     
Sbjct: 596 SGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNRTHEAMRLFREMLDKSEP 655

Query: 535 PDDTVFSTIVKKVADDG 551
           PD   +  + + + + G
Sbjct: 656 PDAITYKIVYRGLCNGG 672



 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 126/427 (29%), Positives = 209/427 (48%), Gaps = 36/427 (8%)

Query: 139 LIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           ++ +M    +I PD  F   L+  L+  ++++        MV      D  T+N+++  L
Sbjct: 154 IVKVMEDEYRIKPDTRFYNVLLNVLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKAL 213

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           CK  Q+R AI +++EM   G  PD  T+ TI++   + G    A+               
Sbjct: 214 CKAHQVRPAILMMEEMPSYGLSPDETTFTTIMQGYIEGGNLDGAL--------------- 258

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                + + M   GC    VT N L+N  CKQG+ D A+  I  
Sbjct: 259 --------------------RIKEQMVEYGCPCTDVTVNVLINGFCKQGRIDQALSFIQE 298

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
            +S G  P+  TYNTL++ L   G      +++D M      P ++TYN LI+GLCK G 
Sbjct: 299 AVSEGFRPDQFTYNTLVNGLCKIGHAKHAMEVVDAMLLGGLDPDIYTYNSLISGLCKLGE 358

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           ++ A+   +QMVS++C P+ VTYN ++ +LCKE  ++EA ++  LL      P + T+N+
Sbjct: 359 IEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEATEIARLLTSKGILPDVCTFNS 418

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI GL      + AM L+ +M   G  PD+ T+  LI   C + ++EEA++LLKE+   G
Sbjct: 419 LIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSLCSSRKLEEALNLLKEMELNG 478

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y  +I G CK+K+++ A ++ + M       D   ++T++  +      E+A 
Sbjct: 479 CARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDSVTYNTLIDGLCKSKRVEDAA 538

Query: 558 KLWQKLI 564
           +L  ++I
Sbjct: 539 QLMDQMI 545



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 211/425 (49%), Gaps = 9/425 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++   C  G++ +A K++D M  R+  P+      +I  L + +R+++A+
Sbjct: 339 LDPDIYTYNSLISGLCKLGEIEEAVKILDQMVSRDCSPNAVTYNAIISSLCKENRVDEAT 398

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ +++   G +PD  T+N ++ GLC     +SA+ L +EM   GC PD  TYN ++ ++
Sbjct: 399 EIARLLTSKGILPDVCTFNSLIQGLCLSSNHKSAMDLFEEMKGKGCRPDEFTYNMLIDSL 458

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + K ++A+   K+    GC   ++ Y  LI+  CK   I  A E+ D+M ++G S D 
Sbjct: 459 CSSRKLEEALNLLKEMELNGCARNVVIYNTLIDGFCKNKRIEEAEEIFDEMELQGVSRDS 518

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L++  CK  + +DA  +++ ++  G+ P+  TYN+LL      G       I+  
Sbjct: 519 VTYNTLIDGLCKSKRVEDAAQLMDQMIMEGLRPDKFTYNSLLTHFCKTGDIKKAADIVQT 578

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M  +  +P + TY  LI+GLCK G V  A      +  K        YN V+ AL K   
Sbjct: 579 MTSSGCNPDIVTYATLISGLCKAGRVQVASRLLRSIQMKGMVLTPHAYNPVIQALFKRNR 638

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC-MEKAMVLYGQMMENGISPDDITHR 471
            +EA++L   +   S  P  ITY  +  GL   G  + +A+    +M+E G  P+  +  
Sbjct: 639 THEAMRLFREMLDKSEPPDAITYKIVYRGLCNGGGPIGEAVDFTVEMIERGNIPEFSSFV 698

Query: 472 TLIWGFCRA---DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            L  G C     D + + VD++ E  K   +  ++     I G  K +K   A+  L  +
Sbjct: 699 MLAEGLCTLSMDDTLVKLVDMIMEKAKFSEREIST-----IRGFLKIRKFQDALSTLGGI 753

Query: 529 ISSRY 533
           +   Y
Sbjct: 754 LDDMY 758



 Score = 54.7 bits (130), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 49/211 (23%), Positives = 92/211 (43%), Gaps = 2/211 (0%)

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEA 416
           H P  FT   LI  L +      A+  FN    + N  P    Y  +L  L K G     
Sbjct: 57  HLPPDFTPKQLIETLRRQTDEVAALRVFNWASKQPNFVPSSSVYEEILRKLGKAGSFEYM 116

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM-ENGISPDDITHRTLIW 475
            ++L  +  S C      +   ++   K    ++ + +   M  E  I PD   +  L+ 
Sbjct: 117 RRVLEEMKLSGCEFDRGIFLIFVESYGKFELYDEVVGIVKVMEDEYRIKPDTRFYNVLLN 176

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
               A++++        + +R  +   S + ++I  LCK+ +V  AI ++E M S    P
Sbjct: 177 VLVDANKLKLVESAHSSMVRRRIRHDVSTFNILIKALCKAHQVRPAILMMEEMPSYGLSP 236

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           D+T F+TI++   + G  + A ++ ++++E+
Sbjct: 237 DETTFTTIMQGYIEGGNLDGALRIKEQMVEY 267


>gi|302756537|ref|XP_002961692.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
 gi|300170351|gb|EFJ36952.1| hypothetical protein SELMODRAFT_76597 [Selaginella moellendorffii]
          Length = 1056

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 223/408 (54%), Gaps = 7/408 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL +  R+  A    +  +  G  P  +TY+ ++ GLC+  ++     LL+EM+  G
Sbjct: 7   LINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLEEMAGRG 66

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C P+ +TYNT++  +   G+ K+A    +     GCPP LIT+ ++I+ +CK+  I  A 
Sbjct: 67  CAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEGEIEAAF 126

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            V+D+M   G  PD+  +  L++  C+ G+ D+A      +L  G  P+++TYNT++  L
Sbjct: 127 RVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYNTMVDGL 186

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +A   +L ++ E+  SPTVFT+ I ++GL K G +  A   F+ M      P+ 
Sbjct: 187 YKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQTGVSPNT 246

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTY+ ++  LCK G L+ AL LL   N  +    +  +++L+ GL +   +E+A+ L   
Sbjct: 247 VTYDALIDGLCKAGKLDIALGLLRDKNSQA---GMFAFSSLLHGLCQAHRLEEAIQLLKA 303

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M      P+ +   +L+ G C+A +V+EA +L   + + G       Y +++ GLCK ++
Sbjct: 304 M---PCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLKGLCKLRR 360

Query: 518 VDMAIQVLELMISSR-YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +  A + +ELM  +    P+   FST+++ + + G   +A++++++++
Sbjct: 361 IPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMV 408



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 158/581 (27%), Positives = 272/581 (46%), Gaps = 54/581 (9%)

Query: 28  SLQHGVVNNHRTQFYSQLRDLGAGRNVSLKCRGLPGNVCID----------RVNEVDQ-- 75
           SL HG+   HR +   QL         ++ C  +P  VC +          RV+E  +  
Sbjct: 283 SLLHGLCQAHRLEEAIQLLK-------AMPC--VPNVVCFNSLMNGLCQARRVDEAFELF 333

Query: 76  ---DEWSSESHVLAVNKKLRGLTITKK-----SHDPSLPSSDGPFVENDEKTNNKILQNF 127
               E    + V+  N  L+GL   ++      H   +  ++G     +  T + ++Q  
Sbjct: 334 DVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEG--CSPNVVTFSTLIQGL 391

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRID---RIEKA------------ 171
           C+ G++  A ++ + M     I    F    L+ GL +     R+E+             
Sbjct: 392 CNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSS 451

Query: 172 ------SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
                 S  +  +++    P  +TYN +V GL K G +R A+ LL+ M  SG  PDVIT+
Sbjct: 452 SSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITF 511

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N++L  +    +   A   +K  L +GC P ++TY+ LI+ + K   +  A+++L  M  
Sbjct: 512 NSVLDGLCKEQRILDAHNVFKRALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVE 571

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
            GC  + VTY+++V+   K G+ +DAV+V+  +   G  P+++TYNTL+     R     
Sbjct: 572 LGCRANTVTYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLRE 631

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              +L  M EA   P+V TY  L +GLC+ G  D A+   + M ++ C P+ +TY++++ 
Sbjct: 632 AVGLLREMLEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVD 691

Query: 406 ALCKEGMLNEALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            LCK G + EAL     +      +P +I Y+ LIDGL K G +++A     +M+  G  
Sbjct: 692 GLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRI 751

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD +T   LI G C A +++  ++L   + +RG K    AY  +I+  C   +   A  +
Sbjct: 752 PDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYAL 811

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           LE M +     +      ++K +  +   +EA   +  + E
Sbjct: 812 LEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIPE 852



 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 152/541 (28%), Positives = 249/541 (46%), Gaps = 89/541 (16%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKV 174
           D  T N ++      G+L  A  ++ ++A     P  F F I  + GL +   +  A + 
Sbjct: 175 DAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIA-VDGLSKAGNLTGAYEF 233

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL-DEMSVSG---------------- 217
              M  +G  P+T+TY+ ++ GLCK G++  A+ LL D+ S +G                
Sbjct: 234 FDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMFAFSSLLHGLCQAHR 293

Query: 218 ------------CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                       C P+V+ +N+++  +    +  +A   +      GC   +ITY IL++
Sbjct: 294 LEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFELFDVMKESGCSADVITYNILLK 353

Query: 266 QVCKQCGIARAIEVLDDM-AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS-RGM 323
            +CK   I  A   ++ M   EGCSP++VT+++L+   C  G+ + A  V   +++  G+
Sbjct: 354 GLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGLCNAGRVNQAWEVYERMVAVEGI 413

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS---------HS------------PTV 362
            PN  TY  LL  L   G    +++  + M E           HS            PT+
Sbjct: 414 SPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSSSSWPIHSPEVDFLMVQVCRPTL 473

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE------------ 410
            TYN L+ GL K G+V  A+     M+     PD++T+N+VL  LCKE            
Sbjct: 474 VTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITFNSVLDGLCKEQRILDAHNVFKR 533

Query: 411 -----------------------GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
                                    ++EALQLL  +    C    +TY+T++DGL K G 
Sbjct: 534 ALERGCRPNVVTYSTLIDGLSKMAKMDEALQLLAKMVELGCRANTVTYSTVVDGLLKVGR 593

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           ME A+V+  QM + G  PD +T+ TLI GF +  ++ EAV LL+E+ + G       Y  
Sbjct: 594 MEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREMLEAGFHPSVVTYTT 653

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           + HGLC+S + D A+++L+ M +    P+   +S+IV  +   G   EA   ++K+   +
Sbjct: 654 LCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRVTEALGYFEKMARDE 713

Query: 568 V 568
           V
Sbjct: 714 V 714



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 234/446 (52%), Gaps = 6/446 (1%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T + ++      G++ DA  ++  M     +PD      LI G  +  R+ +A  +L+ M
Sbjct: 580  TYSTVVDGLLKVGRMEDAVVVLRQMRDAGCLPDAVTYNTLIDGFFKRQRLREAVGLLREM 639

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + +G  P  +TY  +  GLC+ G+   A+ +LD M+  GC P+ ITY++I+  +   G+ 
Sbjct: 640  LEAGFHPSVVTYTTLCHGLCRSGRFDEAVEILDYMAARGCAPNAITYSSIVDGLCKAGRV 699

Query: 239  KQAIGFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+G+++   R +   P++I Y+ LI+ +CK   I  A E L+ M   G  PD+VT++ 
Sbjct: 700  TEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLERMIRAGRIPDVVTFSI 759

Query: 298  LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
            L+N  C  G+ D  + +   +  RG + +   YN ++++   +G + A   +L+ M    
Sbjct: 760  LINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGEFSAAYALLEEMKTHG 819

Query: 358  HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             +    T+ I+I  LC    +D A++ F+  + ++C+ D ++YNT++ +L       +AL
Sbjct: 820  IAKNTVTHGIVIKALCGNDRIDEAVSYFHS-IPEDCR-DEISYNTLITSLVASRRSEQAL 877

Query: 418  QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +LL  +     SP    Y T++DGL K G  E A  L  +M   G SPD  T+  +I G 
Sbjct: 878  ELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRGHSPDLRTYTIMISGL 937

Query: 478  CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
             +A Q+  A D  +E+ ++  K     Y  +I   CK+ KVD A ++L    SS  +P  
Sbjct: 938  SKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAWKLLR---SSGIEPTI 994

Query: 538  TVFSTIVKKVADDGMTEEAYKLWQKL 563
            T++ST+V  +  +  T++A ++ +++
Sbjct: 995  TMYSTMVDSLCKNRGTDKALEVIREM 1020



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 131/505 (25%), Positives = 237/505 (46%), Gaps = 64/505 (12%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C   ++    KL++ MA R   P+      L+  L+   R ++A  +L+ M
Sbjct: 38  TYSTVIDGLCRDNEVDKGCKLLEEMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERM 97

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG---------------CE---- 219
             +G  P+ IT+ +++ GLCK G+I +A  ++DEM   G               CE    
Sbjct: 98  AANGCPPELITFGLIIKGLCKEGEIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRV 157

Query: 220 ----------------PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                           PD +TYNT++  ++  G+ + A    +        P + T+TI 
Sbjct: 158 DEAWFFFQQVLLIGFTPDAVTYNTMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIA 217

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           ++ + K   +  A E  D M   G SP+ VTY++L++  CK GK D A+ ++ +   +  
Sbjct: 218 VDGLSKAGNLTGAYEFFDSMPQTGVSPNTVTYDALIDGLCKAGKLDIALGLLRD---KNS 274

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           +     +++LLH L        +++ + ++      P V  +N L+NGLC+   VD A  
Sbjct: 275 QAGMFAFSSLLHGLCQA---HRLEEAIQLLKAMPCVPNVVCFNSLMNGLCQARRVDEAFE 331

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS-CSPCLITYNTLIDGL 442
            F+ M    C  D++TYN +L  LCK   + EA + + L+  +  CSP ++T++TLI GL
Sbjct: 332 LFDVMKESGCSADVITYNILLKGLCKLRRIPEAYRHVELMRRTEGCSPNVVTFSTLIQGL 391

Query: 443 AKKGCMEKAMVLYGQMME-NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
              G + +A  +Y +M+   GISP+  T+  L+ G C+A          +++ +R  +  
Sbjct: 392 CNAGRVNQAWEVYERMVAVEGISPNRFTYAFLLEGLCKAGDSRRLEQCFEQMLEREWRSS 451

Query: 502 NS---------------------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           +S                      Y  ++ GL KS  V  A+ +LE MI S   PD   F
Sbjct: 452 SSWPIHSPEVDFLMVQVCRPTLVTYNTLVTGLSKSGMVRDALGLLEFMIESGLSPDVITF 511

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           ++++  +  +    +A+ ++++ +E
Sbjct: 512 NSVLDGLCKEQRILDAHNVFKRALE 536



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 191/344 (55%), Gaps = 6/344 (1%)

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           ++TYN ++  +   G+   A   ++  ++ G  P ++TY+ +I+ +C+   + +  ++L+
Sbjct: 1   MVTYNVLINGLCKAGRVCDAFTAFRKAIQFGFRPTVVTYSTVIDGLCRDNEVDKGCKLLE 60

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +MA  GC+P+ VTYN+LVN    QG+  +A  ++  + + G  P  IT+  ++  L   G
Sbjct: 61  EMAGRGCAPNAVTYNTLVNALLGQGRAKEAFSLLERMAANGCPPELITFGLIIKGLCKEG 120

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             +A  +++D M +    P V  + +L++ LC+ G VD A   F Q++     PD VTYN
Sbjct: 121 EIEAAFRVVDEMVDRGFVPDVEIHTVLLHALCELGRVDEAWFFFQQVLLIGFTPDAVTYN 180

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           T++  L K G L  A  +L LL  S  SP + T+   +DGL+K G +  A   +  M + 
Sbjct: 181 TMVDGLYKAGRLEAAGMVLQLLAESFSSPTVFTFTIAVDGLSKAGNLTGAYEFFDSMPQT 240

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G+SP+ +T+  LI G C+A +++ A+ LL++   +       A+  ++HGLC++ +++ A
Sbjct: 241 GVSPNTVTYDALIDGLCKAGKLDIALGLLRDKNSQAGMF---AFSSLLHGLCQAHRLEEA 297

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           IQ+L+ M      P+   F++++  +      +EA++L+  + E
Sbjct: 298 IQLLKAMPCV---PNVVCFNSLMNGLCQARRVDEAFELFDVMKE 338



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 191/376 (50%), Gaps = 6/376 (1%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
            T + I+   C  G++T+A    + MAR   + P       LI GL +  RI++A + L+ 
Sbjct: 685  TYSSIVDGLCKAGRVTEALGYFEKMARDEVVAPHVIAYSALIDGLCKAGRIDEAYEFLER 744

Query: 178  MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            M+ +G +PD +T+++++ GLC  G+I + + L   M+  GC+ D+  YN ++      G+
Sbjct: 745  MIRAGRIPDVVTFSILINGLCDAGRIDTGLELFCGMAERGCKADIYAYNAMINAYCLKGE 804

Query: 238  FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            F  A    ++    G     +T+ I+I+ +C    I  A+     +  E C  D ++YN+
Sbjct: 805  FSAAYALLEEMKTHGIAKNTVTHGIVIKALCGNDRIDEAVSYFHSIP-EDCR-DEISYNT 862

Query: 298  LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
            L+       + + A+ ++  +++ G  P++  Y T++  L   G  +   K+L  M    
Sbjct: 863  LITSLVASRRSEQALELLRAMVADGGSPDACNYMTVMDGLFKAGSPEVAAKLLQEMRSRG 922

Query: 358  HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            HSP + TY I+I+GL K   +  A + F +M+ KN +PD + Y++++ A CK   +++A 
Sbjct: 923  HSPDLRTYTIMISGLSKAKQLPLACDYFEEMLRKNLKPDAIVYSSLIDAFCKADKVDDAW 982

Query: 418  QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +LL     S   P +  Y+T++D L K    +KA+ +  +M      P      +L   +
Sbjct: 983  KLLR---SSGIEPTITMYSTMVDSLCKNRGTDKALEVIREMKSKNCEPGIHIWTSLATAY 1039

Query: 478  CRADQVEEAVDLLKEI 493
                +V+EAV L+ ++
Sbjct: 1040 VAEGRVDEAVKLVNDL 1055


>gi|356544498|ref|XP_003540687.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Glycine max]
          Length = 623

 Score =  228 bits (580), Expect = 9e-57,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 233/455 (51%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +C   K  +A +   ++  +  +P+   C  ++   ++++R + A  +   M    
Sbjct: 152 LVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAEMFRMN 211

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
                 T+N+M+  LCK G+++ A   +  M   G +P+V+TYNTI+      GKF++A 
Sbjct: 212 IRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRAR 271

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             ++    KG  P   TY   I  +CK+  +  A  ++  M   G  P+ VTYN+L++  
Sbjct: 272 VIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGY 331

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +G  D A    + ++S+G+  + +TYN  +H+L   G     D ++  M E    P  
Sbjct: 332 CNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDA 391

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+NILING C+ G   RA    ++MV K  QP +VTY +++  L K   + EA  L   
Sbjct: 392 VTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSK 451

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P +I +N LIDG    G +++A  L  +M    + PD+IT+ TL+ G+CR  +
Sbjct: 452 IQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGK 511

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEEA  LL E+ +RG K  + +Y  +I G  K   +  A +V + M+++ + P    ++ 
Sbjct: 512 VEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNA 571

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           +++ +  +   E A +L ++++   +    +T L+
Sbjct: 572 LIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLS 606



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 198/394 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GKL  A + I  M      P+      +I G     + ++A  + Q M
Sbjct: 218 TFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGKFQRARVIFQTM 277

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD  TYN  + GLCK G++  A  L+ +M   G  P+ +TYN ++    + G  
Sbjct: 278 KDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYNALIDGYCNKGDL 337

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A  +  + + KG    L+TY + I  +  +  +  A  ++ +M  +G  PD VT+N L
Sbjct: 338 DKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREKGMMPDAVTHNIL 397

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C+ G    A  +++ ++ +G++P  +TY +L++ LG R      D +   + +   
Sbjct: 398 INGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEADALFSKIQQEGL 457

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +  +N LI+G C  G +DRA     +M +    PD +TYNT++   C+EG + EA Q
Sbjct: 458 LPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQGYCREGKVEEARQ 517

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +      P  I+YNTLI G +K+G M+ A  +  +MM  G  P  +T+  LI G C
Sbjct: 518 LLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMMTTGFDPTILTYNALIQGLC 577

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           +  + E A +LLKE+  +G    +S Y  +I  +
Sbjct: 578 KNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 116/367 (31%), Positives = 187/367 (50%), Gaps = 2/367 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C RGK   A  +   M  +   PD +   + I GL +  R+E+AS ++  M
Sbjct: 253 TYNTIIHGHCLRGKFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKM 312

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G VP+ +TYN ++ G C +G +  A A  DEM   G    ++TYN  +  +F  G+ 
Sbjct: 313 LEGGLVPNAVTYNALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRM 372

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA-RAIEVLDDMAIEGCSPDIVTYNS 297
             A    K+   KG  P  +T+ ILI   C+ CG A RA  +LD+M  +G  P +VTY S
Sbjct: 373 GDADNMIKEMREKGMMPDAVTHNILINGYCR-CGDAKRAFGLLDEMVGKGIQPTLVTYTS 431

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+    K+ +  +A  + + +   G+ P+ I +N L+    + G  D   ++L  M+   
Sbjct: 432 LIYVLGKRNRMKEADALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMK 491

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TYN L+ G C+ G V+ A    ++M  +  +PD ++YNT++    K G + +A 
Sbjct: 492 VLPDEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPDHISYNTLISGYSKRGDMKDAF 551

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++   +  +   P ++TYN LI GL K    E A  L  +M+  GI+PDD T+ ++I   
Sbjct: 552 RVRDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611

Query: 478 CRADQVE 484
              D +E
Sbjct: 612 ETVDDLE 618



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 100/377 (26%), Positives = 192/377 (50%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T+ ++++V   C+  +   A+     +   G  P++ T N +L       + + A   + 
Sbjct: 146 TLIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYA 205

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           +  R      L T+ I+I  +CK+  + +A E +  M   G  P++VTYN++++  C +G
Sbjct: 206 EMFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRG 265

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K+  A ++   +  +G+EP+  TYN+ +  L   G  +    ++  M E    P   TYN
Sbjct: 266 KFQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVTYN 325

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI+G C  G +D+A    ++M+SK     +VTYN  + AL  EG + +A  ++  +   
Sbjct: 326 ALIDGYCNKGDLDKAYAYRDEMISKGIMASLVTYNLFIHALFMEGRMGDADNMIKEMREK 385

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P  +T+N LI+G  + G  ++A  L  +M+  GI P  +T+ +LI+   + ++++EA
Sbjct: 386 GMMPDAVTHNILINGYCRCGDAKRAFGLLDEMVGKGIQPTLVTYTSLIYVLGKRNRMKEA 445

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             L  +I + G       +  +I G C +  +D A Q+L+ M + +  PD+  ++T+++ 
Sbjct: 446 DALFSKIQQEGLLPDIIVFNALIDGHCANGNIDRAFQLLKEMDNMKVLPDEITYNTLMQG 505

Query: 547 VADDGMTEEAYKLWQKL 563
              +G  EEA +L  ++
Sbjct: 506 YCREGKVEEARQLLDEM 522



 Score = 75.5 bits (184), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/118 (38%), Positives = 64/118 (54%), Gaps = 2/118 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKV 174
           DE T N ++Q +C  GK+ +A +L+D M RR   PD H   N LI G  +   ++ A +V
Sbjct: 495 DEITYNTLMQGYCREGKVEEARQLLDEMKRRGIKPD-HISYNTLISGYSKRGDMKDAFRV 553

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
              M+ +G  P  +TYN ++ GLCK  +   A  LL EM   G  PD  TY +I+  M
Sbjct: 554 RDEMMTTGFDPTILTYNALIQGLCKNQEGEHAEELLKEMVSKGITPDDSTYLSIIEAM 611



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 41/177 (23%), Positives = 77/177 (43%)

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           + ++ ++ A C+    NEAL+  +L+      P + T N ++    K    + A VLY +
Sbjct: 147 LIFDLLVRAYCELKKPNEALECFYLIKEKGFVPNIETCNQMLSLFLKLNRTQMAWVLYAE 206

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M    I     T   +I   C+  ++++A + +  +   G K     Y  +IHG C   K
Sbjct: 207 MFRMNIRSSLYTFNIMINVLCKEGKLKKAKEFIGHMETLGVKPNVVTYNTIIHGHCLRGK 266

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
              A  + + M     +PD   +++ +  +  +G  EEA  L  K++E  +     T
Sbjct: 267 FQRARVIFQTMKDKGLEPDCYTYNSFISGLCKEGRLEEASGLICKMLEGGLVPNAVT 323


>gi|359497112|ref|XP_003635427.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 740

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 236/419 (56%), Gaps = 7/419 (1%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           IPD +   + I GL ++ RI +A+K++  M++ G  P++ TY +++ GLC+ G++  A  
Sbjct: 302 IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM 361

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ-LRKGCPPYLITYTILIEQV 267
           LL+++      P+V+ +NT++      G+  +A     +  L  GC P + TY  LI  +
Sbjct: 362 LLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGL 417

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CK+  +  A E++++M I+GC P+++TY  L++  CK+G+ ++A  V++ +  +G+  N+
Sbjct: 418 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 477

Query: 328 ITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           + YN L+ +L       DA++   D M+     P +FT+N LI GLCK    + A+  + 
Sbjct: 478 VGYNCLISALCKDEKVQDALNMFGD-MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 536

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M+ +    + +TYNT++ A  + G + EAL+L++ +    C    ITYN LI  L + G
Sbjct: 537 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 596

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +EK + L+  MM  G++P++I+   LI G CR   ++ A++ L+++  RG       Y 
Sbjct: 597 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 656

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +I+GLCK+ +   A+ + + +      PD   ++T++     +GM ++A+ L  + ++
Sbjct: 657 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 715



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 226/444 (50%), Gaps = 9/444 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C   ++  A  L+  M R   +P+      LI  L ++ R+ +  K+L+ M++ G
Sbjct: 241 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMG 300

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD  T+N  + GLCK  +I  A  L+D M + G  P+  TY  ++  +   GK  +A 
Sbjct: 301 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA- 359

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL-DDMAIEGCSPDIVTYNSLVNF 301
              +  L K   P ++ +  LI     +  +  A  V+ + M   GC PDI TYN+L+  
Sbjct: 360 ---RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 416

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK+G    A  ++N +  +G EPN ITY  L+      G  +    +LD M+    +  
Sbjct: 417 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 476

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
              YN LI+ LCK   V  A+N F  M SK C+PDI T+N+++  LCK     EAL L  
Sbjct: 477 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 536

Query: 422 --LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
             LL G   +   ITYNTLI    ++G M++A+ L   M+  G   DDIT+  LI   CR
Sbjct: 537 DMLLEGVIANT--ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 594

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A  +E+ + L +++  +G    N +  ++I+GLC++  +  A++ L  MI     PD   
Sbjct: 595 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVT 654

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           +++++  +   G  +EA  L+ KL
Sbjct: 655 YNSLINGLCKTGRAQEALNLFDKL 678



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 230/441 (52%), Gaps = 7/441 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N  +   C   ++ +A+KL+D M  R   P+      L+ GL R+ ++++A  +L
Sbjct: 304 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 363

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFD 234
             +      P+ + +N ++ G   RG++  A A++ E  +S GC PD+ TYNT++  +  
Sbjct: 364 NKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 419

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G    A     +   KGC P +ITYTILI++ CK+  +  A  VLD+M+ +G + + V 
Sbjct: 420 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 479

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILDIM 353
           YN L++  CK  K  DA+ +  ++ S+G +P+  T+N+L+  L     ++ A+    D++
Sbjct: 480 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E   + T+ TYN LI+   + G +  A+   N M+ + C  D +TYN ++ ALC+ G +
Sbjct: 540 LEGVIANTI-TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNI 598

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            + L L   +     +P  I+ N LI+GL + G ++ A+     M+  G++PD +T+ +L
Sbjct: 599 EKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSL 658

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+  + +EA++L  ++   G       Y  +I   CK    D A  +L   + S +
Sbjct: 659 INGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGF 718

Query: 534 KPDDTVFSTIVKKVADDGMTE 554
            P++  +  +V     +G  E
Sbjct: 719 IPNEVTWYILVSNFIKEGDQE 739



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 204/392 (52%), Gaps = 5/392 (1%)

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V   M+  G  P   T+ +++  LC   ++ SA ALL +M+  GC P+ I Y T++  + 
Sbjct: 222 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALS 281

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+  + +   ++ L  GC P + T+   I  +CK   I  A +++D M + G +P+  
Sbjct: 282 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 341

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL-DI 352
           TY  L++  C+ GK D+A +++N + +    PN + +NTL++   SRG  D    ++ + 
Sbjct: 342 TYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHES 397

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P +FTYN LI GLCK G +  A    N+M  K C+P+++TY  ++   CKEG 
Sbjct: 398 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 457

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L EA  +L  ++G   +   + YN LI  L K   ++ A+ ++G M   G  PD  T  +
Sbjct: 458 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 517

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI+G C+ ++ EEA+ L +++   G       Y  +IH   +   +  A++++  M+   
Sbjct: 518 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 577

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              DD  ++ ++K +   G  E+   L++ ++
Sbjct: 578 CPLDDITYNGLIKALCRAGNIEKGLALFEDMM 609



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 183/349 (52%), Gaps = 4/349 (1%)

Query: 101 HDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIR 160
           H+  L    GP    D  T N ++   C +G L  A +L++ M  +   P+      LI 
Sbjct: 395 HESMLSVGCGP----DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 450

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
              +  R+E+A  VL  M   G   + + YN ++  LCK  +++ A+ +  +MS  GC+P
Sbjct: 451 RFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 510

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D+ T+N+++  +    KF++A+G ++D L +G     ITY  LI    ++  +  A++++
Sbjct: 511 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 570

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           +DM   GC  D +TYN L+   C+ G  +  + +  +++S+G+ PN+I+ N L++ L   
Sbjct: 571 NDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 630

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G      + L  M     +P + TYN LINGLCK G    A+N F+++  +   PD +TY
Sbjct: 631 GNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITY 690

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           NT++   CKEGM ++A  LL     S   P  +T+  L+    K+G  E
Sbjct: 691 NTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 739



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 195/381 (51%), Gaps = 5/381 (1%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P   +YN+++  L      +    +  EM   G  P V T+  +++ +    +   A   
Sbjct: 198 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 257

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            KD  R GC P  I Y  LI  + K   +   +++L++M + GC PD+ T+N  ++  CK
Sbjct: 258 LKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 317

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             +  +A  +++ +L RG  PNS TY  L+H L   G    VD+   ++N+  + P V  
Sbjct: 318 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG---KVDEARMLLNKVPN-PNVVL 373

Query: 365 YNILINGLCKYGLVDRAINSFNQ-MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           +N LING    G +D A    ++ M+S  C PDI TYNT++  LCK+G L  A +L++ +
Sbjct: 374 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 433

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
               C P +ITY  LID   K+G +E+A  +  +M   G++ + + +  LI   C+ ++V
Sbjct: 434 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 493

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           ++A+++  ++  +G K     +  +I GLCK  K + A+ + + M+      +   ++T+
Sbjct: 494 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 553

Query: 544 VKKVADDGMTEEAYKLWQKLI 564
           +      G  +EA KL   ++
Sbjct: 554 IHAFLRRGAMQEALKLVNDML 574



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 182/357 (50%), Gaps = 5/357 (1%)

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           LLD   V  CEP   +YN +L  +      K     + + L KG  P + T+ ++++ +C
Sbjct: 187 LLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALC 246

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
               +  A  +L DM   GC P+ + Y +L++   K G+ ++ + ++  +L  G  P+  
Sbjct: 247 LVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALSKVGRVNEVLKLLEEMLLMGCIPDVN 306

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           T+N  +H L          K++D M     +P  FTY +L++GLC+ G VD A      +
Sbjct: 307 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RML 362

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGC 447
           ++K   P++V +NT++      G L+EA  ++H  +    C P + TYNTLI GL KKG 
Sbjct: 363 LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 422

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +  A  L  +M   G  P+ IT+  LI  FC+  ++EEA ++L E+  +G  +    Y  
Sbjct: 423 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 482

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +I  LCK +KV  A+ +   M S   KPD   F++++  +      EEA  L+Q ++
Sbjct: 483 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 539


>gi|20219038|gb|AAM15782.1|AC104428_3 Putative indole-3-acetate beta-glucosyltransferase [Oryza sativa
           Japonica Group]
 gi|108706351|gb|ABF94146.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|125585039|gb|EAZ25703.1| hypothetical protein OsJ_09536 [Oryza sativa Japonica Group]
          Length = 648

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 237/450 (52%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T+N ++      G    A  L+D M  +   P      ++++GL R    +KA +V 
Sbjct: 190 DVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVF 249

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD  ++ +++GG C+ G+I  A+ +  EM   G +PD+++++ ++      
Sbjct: 250 KEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARR 309

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+ + ++    G  P  + YT++I   C+   ++ A+ V D+M   GC PD+VTY
Sbjct: 310 GKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTY 369

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  CK+ +  DA  ++N +  RG+ P+  T+ TL+H     G  D   ++ D M  
Sbjct: 370 NTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLN 429

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN LI+G+C+ G +D+A + ++ M S+   P+ VTY+ ++ + C++G + +
Sbjct: 430 QRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVED 489

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A   L  +      P ++TYN++I G  + G + K      +MM N +SPD IT+ TLI 
Sbjct: 490 AFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIH 549

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+ + D++ +A  LL  + K   +     Y ++I+G      V  A  + E M +   +P
Sbjct: 550 GYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEP 609

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   + +++      G ++EA++L  ++++
Sbjct: 610 DRYTYMSMINGHVTAGNSKEAFQLHDEMLQ 639



 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 125/385 (32%), Positives = 205/385 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D ++   ++  FC  G++ +A K+   M  R   PD      LI    R  +++ A 
Sbjct: 257 VAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAM 316

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             L+ M   G VPD + Y M++GG C+ G +  A+ + DEM   GC PDV+TYNT+L  +
Sbjct: 317 AYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGL 376

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +   A G   +   +G PP L T+T LI   C +  + +A+++ D M  +   PDI
Sbjct: 377 CKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDI 436

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L++  C+QG  D A  + +++ SR + PN +TY+ L+ S   +G  +     LD 
Sbjct: 437 VTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDE 496

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P + TYN +I G C+ G V +      +M+     PD++TYNT++    KE  
Sbjct: 497 MINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDK 556

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +++A +LL+++      P ++TYN LI+G +  G +++A  ++ +M   GI PD  T+ +
Sbjct: 557 MHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMS 616

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           +I G   A   +EA  L  E+ +RG
Sbjct: 617 MINGHVTAGNSKEAFQLHDEMLQRG 641



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/419 (29%), Positives = 216/419 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+  C  G    A ++   M      PD      LI G  R+  IE+A K+ + M
Sbjct: 228 TYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEM 287

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD ++++ ++G   +RG++  A+A L EM   G  PD + Y  ++      G  
Sbjct: 288 RHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLM 347

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+    + +  GC P ++TY  L+  +CK+  +  A  +L++M   G  PD+ T+ +L
Sbjct: 348 SDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTL 407

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C +GK D A+ + + +L++ + P+ +TYNTL+  +  +G  D  + + D M+    
Sbjct: 408 IHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREI 467

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY+ILI+  C+ G V+ A    ++M++K   P+I+TYN+++   C+ G +++  +
Sbjct: 468 FPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQK 527

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            L  +  +  SP LITYNTLI G  K+  M  A  L   M +  + PD +T+  LI GF 
Sbjct: 528 FLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFS 587

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
               V+EA  + +++  +G +     Y  +I+G   +     A Q+ + M+   + PDD
Sbjct: 588 VHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPDD 646



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 205/401 (51%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
            +K   V+  M      PD +T+N+MV    + G   +A+AL+D M   G +P ++TYN+
Sbjct: 172 FDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVDSMVSKGLKPGIVTYNS 231

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           +L+ +  +G + +A   +K+    G  P + ++TILI   C+   I  A+++  +M   G
Sbjct: 232 VLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVGEIEEALKIYKEMRHRG 291

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD+V+++ L+    ++GK D A+  +  +   G+ P+ + Y  ++      G      
Sbjct: 292 IKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYTMVIGGFCRAGLMSDAL 351

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++ D M      P V TYN L+NGLCK   +  A    N+M  +   PD+ T+ T++   
Sbjct: 352 RVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGY 411

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C EG L++ALQL   +      P ++TYNTLIDG+ ++G ++KA  L+  M    I P+ 
Sbjct: 412 CIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNH 471

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+  LI   C   QVE+A   L E+  +G       Y  +I G C+S  V    + L+ 
Sbjct: 472 VTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQK 531

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           M+ ++  PD   ++T++     +    +A+KL   + + KV
Sbjct: 532 MMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKV 572



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 230/451 (50%), Gaps = 2/451 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T N ++ N+C   +      +I  M +R   PD      ++    R    E A  
Sbjct: 153 EVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMA 212

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  P  +TYN ++ GLC+ G    A  +  EM   G  PDV ++  ++    
Sbjct: 213 LVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFC 272

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+ ++A+  +K+   +G  P L++++ LI    ++  +  A+  L +M   G  PD V
Sbjct: 273 RVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGV 332

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDI 352
            Y  ++   C+ G   DA+ V + ++  G  P+ +TYNTLL+ L   R   DA + +L+ 
Sbjct: 333 IYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA-EGLLNE 391

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E    P + T+  LI+G C  G +D+A+  F+ M+++  +PDIVTYNT++  +C++G 
Sbjct: 392 MRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGD 451

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L++A  L   ++     P  +TY+ LID   +KG +E A     +M+  GI P+ +T+ +
Sbjct: 452 LDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNS 511

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G+CR+  V +    L+++           Y  +IHG  K  K+  A ++L +M   +
Sbjct: 512 IIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEK 571

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +PD   ++ ++   +  G  +EA  +++K+
Sbjct: 572 VQPDVVTYNMLINGFSVHGNVQEAGWIFEKM 602



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/398 (28%), Positives = 203/398 (51%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A+   +++  S    +T T N+MV   CK  +     A++ EM      PDV+T+N ++ 
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 199

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
             F  G  + A+      + KG  P ++TY  +++ +C+     +A EV  +M   G +P
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+ ++  L+   C+ G+ ++A+ +   +  RG++P+ ++++ L+     RG  D     L
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYL 319

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M      P    Y ++I G C+ GL+  A+   ++MV   C PD+VTYNT+L  LCKE
Sbjct: 320 REMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKE 379

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             L +A  LL+ +      P L T+ TLI G   +G ++KA+ L+  M+   + PD +T+
Sbjct: 380 RRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTY 439

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            TLI G CR   +++A DL  ++  R     +  Y ++I   C+  +V+ A   L+ MI+
Sbjct: 440 NTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMIN 499

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
               P+   +++I+K     G   +  K  QK++  KV
Sbjct: 500 KGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKV 537



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 171/318 (53%), Gaps = 2/318 (0%)

Query: 259 TYT--ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           TYT  I++   CK     +   V+ +M      PD+VT+N +V+   + G  + A+ +++
Sbjct: 156 TYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVDARFRAGDAEAAMALVD 215

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
           +++S+G++P  +TYN++L  L   G WD   ++   M++   +P V ++ ILI G C+ G
Sbjct: 216 SMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAPDVRSFTILIGGFCRVG 275

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            ++ A+  + +M  +  +PD+V+++ ++G   + G ++ A+  L  +      P  + Y 
Sbjct: 276 EIEEALKIYKEMRHRGIKPDLVSFSCLIGLFARRGKMDHAMAYLREMRCFGLVPDGVIYT 335

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            +I G  + G M  A+ +  +M+  G  PD +T+ TL+ G C+  ++ +A  LL E+ +R
Sbjct: 336 MVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRER 395

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       +  +IHG C   K+D A+Q+ + M++ R +PD   ++T++  +   G  ++A
Sbjct: 396 GVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKA 455

Query: 557 YKLWQKLIEWKVFEKGTT 574
             LW  +   ++F    T
Sbjct: 456 NDLWDDMHSREIFPNHVT 473



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 139/281 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C   +L DA  L++ M  R   PD      LI G     +++KA ++ 
Sbjct: 365 DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 424

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+     PD +TYN ++ G+C++G +  A  L D+M      P+ +TY+ ++ +  + 
Sbjct: 425 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 484

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ + A GF  + + KG  P ++TY  +I+  C+   +++  + L  M +   SPD++TY
Sbjct: 485 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITY 544

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++   K+ K  DA  ++N +    ++P+ +TYN L++     G       I + M  
Sbjct: 545 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 604

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               P  +TY  +ING    G    A    ++M+ +   PD
Sbjct: 605 KGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 70/248 (28%), Positives = 122/248 (49%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   ++  +C  GKL  A +L D M  +   PD      LI G+ R   ++KA+
Sbjct: 397 VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 456

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M      P+ +TY++++   C++GQ+  A   LDEM   G  P+++TYN+I++  
Sbjct: 457 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 516

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G   +   F +  +     P LITY  LI    K+  +  A ++L+ M  E   PD+
Sbjct: 517 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDV 576

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN L+N     G   +A  +   + ++G+EP+  TY ++++   + G      ++ D 
Sbjct: 577 VTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDE 636

Query: 353 MNEASHSP 360
           M +   +P
Sbjct: 637 MLQRGFAP 644



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 48/208 (23%), Positives = 88/208 (42%)

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +S +P    +++LI    +      A  +F  ++           N +L AL + G  + 
Sbjct: 80  SSPTPQPRVFDLLIRTYTQSRKPREAFEAFRLILDHRVPIPAAASNALLAALSRAGWPHL 139

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A     L+  S+      T N ++    K    +K   +  +M +  + PD +TH  ++ 
Sbjct: 140 AADAYRLVFSSNSEVNTYTLNIMVHNYCKALEFDKVDAVISEMEKRCVFPDVVTHNVMVD 199

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
              RA   E A+ L+  +  +G K     Y  V+ GLC+S   D A +V + M      P
Sbjct: 200 ARFRAGDAEAAMALVDSMVSKGLKPGIVTYNSVLKGLCRSGMWDKAWEVFKEMDDFGVAP 259

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D   F+ ++      G  EEA K+++++
Sbjct: 260 DVRSFTILIGGFCRVGEIEEALKIYKEM 287



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 48/109 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N ++  +    K+ DA KL+++M +    PD      LI G      +++A 
Sbjct: 537 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 596

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
            + + M   G  PD  TY  M+ G    G  + A  L DEM   G  PD
Sbjct: 597 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 645


>gi|302754868|ref|XP_002960858.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
 gi|300171797|gb|EFJ38397.1| hypothetical protein SELMODRAFT_75631 [Selaginella moellendorffii]
          Length = 699

 Score =  228 bits (580), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 124/420 (29%), Positives = 220/420 (52%), Gaps = 38/420 (9%)

Query: 162 LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
           L R++R ++A  + +  +    +P+  TY +++ G    G +  AI LL+EM  SG E +
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGN 91

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
            + + T+++ + D G+  +A+  ++  + K C P ++TYT L+  +CK      A  +L 
Sbjct: 92  AVVHTTLMKGLCDAGRVVEALEHFR-AMAKDCAPDVMTYTALVHALCKAGKFDEAQGMLR 150

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM------------------ 323
           +M  +GC+PD VT+++L++  CK G  + A  V+ +++ RGM                  
Sbjct: 151 EMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKY 210

Query: 324 ------------------EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
                              P  + +N +++        D+  K+L++M E    P VFT+
Sbjct: 211 NSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTF 270

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
            ILI GLCK   V  A     +MV   C P++VTY+TV+  LCK+G +++A +L  L+  
Sbjct: 271 TILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 330

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
            +C P ++T+N LIDGL K   +E+A  LY +M E G +PD IT+ +LI G C++ QV+E
Sbjct: 331 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE 390

Query: 486 AVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           A  L + I + G    N+  Y  + HG     ++  A ++  +++   + PD   +++++
Sbjct: 391 AFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 450



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/492 (26%), Positives = 235/492 (47%), Gaps = 41/492 (8%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +   +  +++  C  G++ +A +    MA+ +  PD      L+  L +  + ++A  
Sbjct: 89  EGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQG 147

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ MV  G  PDT+T++ ++ GLCK G    A  +L+++   G       + TI++ + 
Sbjct: 148 MLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLC 207

Query: 234 DN-GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           +     + A       + KG  P ++ + ++I   CK   +  A ++L+ M  +GC P++
Sbjct: 208 NKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNV 267

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+  L+   CK  +  +A  ++  ++  G  PN +TY+T+++ L  +G  D   ++  +
Sbjct: 268 FTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQL 327

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M   +  P V T+NILI+GLCK   ++ A   +++M    C PDI+TYN+++  LCK   
Sbjct: 328 MERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQ 387

Query: 413 LNEALQLLHLLNGSSCSPC-LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           ++EA QL   +  S  S    +TY+TL  G A  G M  A  ++  +++ G SPD  T+ 
Sbjct: 388 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYT 447

Query: 472 TLIWGFCR-----------------------------------ADQVEEAVDLLKEIGKR 496
           +LI  +C+                                    +  E A+ L   +  R
Sbjct: 448 SLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 507

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR---YKPDDTVFSTIVKKVADDGMT 553
           G       Y LV+ G+ ++ K D A+ VLE +I  R   + P  +    +V+ +   G T
Sbjct: 508 GCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGKT 567

Query: 554 EEAYKLWQKLIE 565
           ++A +L  K+ E
Sbjct: 568 DDAKQLLHKMSE 579



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 235/500 (47%), Gaps = 40/500 (8%)

Query: 115 NDEKTNNKILQNFCSRGKLTD-ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           N +     I+Q  C++    + ASK++ ++  +   P       +I G  +   ++ A K
Sbjct: 194 NSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYK 253

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L++M+  G VP+  T+ +++ GLCK  ++  A  LL++M + GC P+V+TY+T++  + 
Sbjct: 254 LLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLC 313

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+   A   ++   R+ CPP ++T+ ILI+ +CK   I  A ++   M   GC+PDI+
Sbjct: 314 KQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDII 373

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP-NSITYNTLLHSLGSRGCWDAVDKILDI 352
           TYNSL++  CK  + D+A  +   +   G+   N++TY+TL H   + G      +I  +
Sbjct: 374 TYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSM 433

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + +   SP + TY  LI   CK       +    +M SK   P + T + VLG L +   
Sbjct: 434 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 493

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN---GISPDDIT 469
              A+QL   +    C+   + YN +++G+A+    +KA+ +  Q+++      +P    
Sbjct: 494 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKRDRKFNPSSSA 553

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL----------------- 512
              L+   C+  + ++A  LL ++ +RG     S+Y  ++ GL                 
Sbjct: 554 VDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWDEATQVFEAMV 613

Query: 513 ------------------CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
                             C + KVD A ++++ M      PD    +T++      G  +
Sbjct: 614 SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLIGGYCKSGRAD 673

Query: 555 EAYKLWQKLIEWKVFEKGTT 574
            A KL +++ E  +    TT
Sbjct: 674 LARKLLEEMTEAGLEPNDTT 693



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 182/394 (46%), Gaps = 39/394 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C +G++ DA +L  +M RRN  P+      LI GL +  RIE+A ++   M
Sbjct: 304 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 363

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP-DVITYNTILRTMFDNGK 237
             +G  PD ITYN ++ GLCK  Q+  A  L   +  SG    + +TY+T+       G+
Sbjct: 364 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 423

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC-------------------------- 271
              A   +   + KG  P L TYT LI + CK                            
Sbjct: 424 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 483

Query: 272 ---------GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS-- 320
                       RAI++ D MA  GC+ D + YN +V    +  K+D A+ V+  ++   
Sbjct: 484 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHDKALAVLEQVIDKR 543

Query: 321 -RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            R   P+S   + L+ SL   G  D   ++L  M+E   +  V +YN L++GL +    D
Sbjct: 544 DRKFNPSSSAVDALVESLCQVGKTDDAKQLLHKMSERGFAAAVSSYNRLLSGLSRLQRWD 603

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A   F  MVS    P+I T N V+  LC    +++A +L+  ++   C P + T NTLI
Sbjct: 604 EATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLI 663

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            G  K G  + A  L  +M E G+ P+D TH  L
Sbjct: 664 GGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 697



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 100/373 (26%), Positives = 194/373 (52%), Gaps = 2/373 (0%)

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           LC+  + + A+AL        C P+  TY  ++R     G    AI   ++    G    
Sbjct: 32  LCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSSGFEGN 91

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
            + +T L++ +C    +  A+E    MA + C+PD++TY +LV+  CK GK+D+A  ++ 
Sbjct: 92  AVVHTTLMKGLCDAGRVVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLR 150

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC-KY 375
            ++++G  P+++T++TL+  L   G  +   ++L+ + +     +   +  +I  LC KY
Sbjct: 151 EMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKY 210

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
             V+ A      +++K   P ++ +N V+   CK   L+ A +LL ++    C P + T+
Sbjct: 211 NSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTF 270

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
             LI GL K   + +A  L  +M+  G SP+ +T+ T+I G C+  QV++A +L + + +
Sbjct: 271 TILITGLCKANRVGEAQQLLEKMVMGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMER 330

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           R        + ++I GLCK+K+++ A Q+   M  +   PD   +++++  +      +E
Sbjct: 331 RNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDE 390

Query: 556 AYKLWQKLIEWKV 568
           A++L+Q + E  V
Sbjct: 391 AFQLFQTIPESGV 403



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 141/275 (51%), Gaps = 2/275 (0%)

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           ++ + N  ++  C+  +  +A+ +  N ++R   PN  TY  L+    S G  D   ++L
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           + M  +        +  L+ GLC  G V  A+  F  M +K+C PD++TY  ++ ALCK 
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAM-AKDCAPDVMTYTALVHALCKA 139

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G  +EA  +L  +    C+P  +T++TLIDGL K G  E+A  +   +++ G+   D   
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAF 199

Query: 471 RTLIWGFC-RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
            T+I   C + + VE A  +L  +  +G       + LVI+G CK+K +D A ++LE+MI
Sbjct: 200 ETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMI 259

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                P+   F+ ++  +       EA +L +K++
Sbjct: 260 EKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMV 294



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 49/170 (28%), Positives = 83/170 (48%), Gaps = 1/170 (0%)

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           ++ + N  L  LC+     EAL L        C P   TY  LI G +  G ++ A+ L 
Sbjct: 21  NVFSCNCALDMLCRLNRRQEALALFRNAMARICMPNKFTYGILIRGFSSAGDLDIAIQLL 80

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M  +G   + + H TL+ G C A +V EA++  + + K         Y  ++H LCK+
Sbjct: 81  EEMKSSGFEGNAVVHTTLMKGLCDAGRVVEALEHFRAMAKDCAP-DVMTYTALVHALCKA 139

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            K D A  +L  M++    PD   FST++  +   G  E+A+++ + +I+
Sbjct: 140 GKFDEAQGMLREMVAQGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQ 189


>gi|215794293|gb|ACJ70132.1| restorer-of-fertility [Brassica napus]
          Length = 667

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 135/436 (30%), Positives = 220/436 (50%), Gaps = 12/436 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKA 171
           ++ ++ T   I+   C  G    A  L+  M   ++I P+      +I GL +  R   A
Sbjct: 208 LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDA 267

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M   G  P+  TYN M+ G C  G+   A  LL EM      PDV+T++ ++  
Sbjct: 268 QNLFSEMQEKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINA 327

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   GKF +A   + + L +G  P  ITY  +I+   KQ  +  A  +   MA +GCSPD
Sbjct: 328 LVKEGKFFEAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPD 387

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           ++T++ L++  C   + DD + +++ +  RG+  N+ITY TL+H     G  +A   +L 
Sbjct: 388 VITFSILIDGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQ 447

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-----------NCQPDIVTY 400
            M  +   P V T N L++GLC  G +  A+  F  M              + +PD+ TY
Sbjct: 448 EMISSGVCPNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTY 507

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N ++  L  EG  +EA +L   +      P  ITYN++IDGL K+  +++A  ++  M  
Sbjct: 508 NILICGLINEGKFSEAEELYEEMPHRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSMGS 567

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G SPD +T  TLI G+C+  +V + +++  E+G+RG       YR +IHG C+   ++ 
Sbjct: 568 KGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRRGIVANAITYRTLIHGFCQVGNING 627

Query: 521 AIQVLELMISSRYKPD 536
           A+ + + MISS   PD
Sbjct: 628 ALDIFQEMISSGVYPD 643



 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 144/477 (30%), Positives = 235/477 (49%), Gaps = 28/477 (5%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           ITK    PSL             T + +L   C   ++++A      + + N I      
Sbjct: 137 ITKLGFHPSLV------------TFSTLLHGLCVEDRVSEALHFFHQICKPNVIA----F 180

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS- 214
             L+ GL R  R+ +A  +L  MV  G  P+ ITY  +V G+CK G   SA+ LL +M  
Sbjct: 181 TTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEE 240

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           VS  +P+V+ Y+ I+  ++ +G+   A   + +   KG  P L TY  +I   C     +
Sbjct: 241 VSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMINGFCSSGRWS 300

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A  +L +M     SPD+VT++ L+N   K+GK+ +A  + N +L RG+ PN+ITYN+++
Sbjct: 301 EAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIPNTITYNSMI 360

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                +   DA +++  +M     SP V T++ILI+G C    VD  +   ++M  +   
Sbjct: 361 DGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLLHEMSRRGLV 420

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            + +TY T++   C+ G LN AL LL  +  S   P ++T NTL+DGL   G ++ A+ +
Sbjct: 421 ANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNNGKLKDALEM 480

Query: 455 YGQMME-----------NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           +  M +           N + PD  T+  LI G     +  EA +L +E+  RG      
Sbjct: 481 FKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTI 540

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            Y  VI GLCK  ++D A Q+ + M S  + PD   F+T++      G   +  +++
Sbjct: 541 TYNSVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVF 597



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 231/454 (50%), Gaps = 17/454 (3%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           K+   F     L DA  L   M R   +P    FC  L+  ++R++R +    + + M M
Sbjct: 46  KLQSGFHEIKGLDDAIDLFGYMVRSRPLPCVIDFC-KLLGVVVRMERPDVVISLHRKMEM 104

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
                +  ++ +++   C   ++  A++   +++  G  P ++T++T+L  +    +  +
Sbjct: 105 RRIPCNIYSFTILIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSE 164

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+ F+     + C P +I +T L+  +C++  +  A+ +LD M  +G  P+ +TY ++V+
Sbjct: 165 ALHFF----HQICKPNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVD 220

Query: 301 FSCKQGKYDDAVLVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
             CK G   D V  +N  L R ME      PN + Y+ ++  L   G       +   M 
Sbjct: 221 GMCKMG---DTVSALN--LLRKMEEVSRIKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQ 275

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E   SP +FTYN +ING C  G    A     +M  +   PD+VT++ ++ AL KEG   
Sbjct: 276 EKGISPNLFTYNCMINGFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFF 335

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +L + +      P  ITYN++IDG +K+  ++ A  ++  M   G SPD IT   LI
Sbjct: 336 EAEELYNEMLPRGIIPNTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILI 395

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C A +V++ + LL E+ +RG       Y  +IHG C+   ++ A+ +L+ MISS   
Sbjct: 396 DGYCGAKRVDDGMKLLHEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVC 455

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           P+    +T++  + ++G  ++A ++++ + + K+
Sbjct: 456 PNVVTCNTLLDGLCNNGKLKDALEMFKVMQKSKM 489



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/454 (24%), Positives = 221/454 (48%), Gaps = 18/454 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ FCS  KL  A      + +    P       L+ GL   DR+ +A      +    
Sbjct: 117 LIKCFCSCSKLPFALSTFGKITKLGFHPSLVTFSTLLHGLCVEDRVSEALHFFHQICK-- 174

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ I +  ++ GLC+ G++  A+ALLD M   G +P+ ITY TI+  M   G    A+
Sbjct: 175 --PNVIAFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVSAL 232

Query: 243 GFWK--DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
              +  +++ +   P ++ Y+ +I+ + K      A  +  +M  +G SP++ TYN ++N
Sbjct: 233 NLLRKMEEVSR-IKPNVVIYSAIIDGLWKDGRQTDAQNLFSEMQEKGISPNLFTYNCMIN 291

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G++ +A  ++  +  R M P+ +T++ L+++L   G +   +++ + M      P
Sbjct: 292 GFCSSGRWSEAQRLLREMFERKMSPDVVTFSVLINALVKEGKFFEAEELYNEMLPRGIIP 351

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN +I+G  K   +D A   F  M +K C PD++T++ ++   C    +++ ++LL
Sbjct: 352 NTITYNSMIDGFSKQNRLDAAERMFYLMATKGCSPDVITFSILIDGYCGAKRVDDGMKLL 411

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           H ++        ITY TLI G  + G +  A+ L  +M+ +G+ P+ +T  TL+ G C  
Sbjct: 412 HEMSRRGLVANTITYTTLIHGFCQLGNLNAALDLLQEMISSGVCPNVVTCNTLLDGLCNN 471

Query: 481 DQVEEAVDLLKEIGKRGNKMRNS-----------AYRLVIHGLCKSKKVDMAIQVLELMI 529
            ++++A+++ K + K    +  S            Y ++I GL    K   A ++ E M 
Sbjct: 472 GKLKDALEMFKVMQKSKMDLDASHPFNDVEPDVQTYNILICGLINEGKFSEAEELYEEMP 531

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                PD   +++++  +      +EA +++  +
Sbjct: 532 HRGLVPDTITYNSVIDGLCKQSRLDEATQMFDSM 565



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 48/184 (26%), Positives = 91/184 (49%), Gaps = 3/184 (1%)

Query: 97  TKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCI 156
           +K   D S P +D   VE D +T N ++    + GK ++A +L + M  R  +PD     
Sbjct: 487 SKMDLDASHPFND---VEPDVQTYNILICGLINEGKFSEAEELYEEMPHRGLVPDTITYN 543

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           ++I GL +  R+++A+++   M   G  PD +T+  ++ G CK G++   + +  EM   
Sbjct: 544 SVIDGLCKQSRLDEATQMFDSMGSKGFSPDVVTFTTLINGYCKVGRVGDGLEVFCEMGRR 603

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G   + ITY T++      G    A+  +++ +  G  P  IT   ++  +  +  + RA
Sbjct: 604 GIVANAITYRTLIHGFCQVGNINGALDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRA 663

Query: 277 IEVL 280
           ++ L
Sbjct: 664 VQCL 667


>gi|302799689|ref|XP_002981603.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
 gi|300150769|gb|EFJ17418.1| hypothetical protein SELMODRAFT_114722 [Selaginella moellendorffii]
          Length = 609

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 253/469 (53%), Gaps = 9/469 (1%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHF 154
           +T K+++      DG  V  D  T + ++  FC +G++  A +++  M  R+ + PD   
Sbjct: 24  LTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRACEILREMVTRDGMAPDVVT 83

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
             +++ GL R  ++++A ++++ M + G  PD  T++ ++ G C   ++  A+ L  E+ 
Sbjct: 84  YTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITGWCNARKVDEALKLYKEIL 143

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD-QLRK--GCPPYLITYTILIEQVCKQC 271
            S C  D ++ + ++  +    +  +A   +++ ++R+     P ++TYT LI+  CK  
Sbjct: 144 TSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSG 203

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            + +A+++L  M    C P++VTY+SL++  CK G  D A+ +   + S+G  PN +TY 
Sbjct: 204 NLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYT 263

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           TL+H L +    DA   ++D M          +YN L++G C+ G ++ A   F +M +K
Sbjct: 264 TLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAK 323

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +C PD +TY  ++   C    L EA  LL ++   +   P ++TY+ ++ G ++     +
Sbjct: 324 SCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVE 383

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A     +M+   ++P+ +T+ +LI G C+A +V  A+++LK +    +K     Y +VI 
Sbjct: 384 AAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAMEVLKNV----DKPDVVTYTIVIE 439

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           GLC + + + A+ +LE M++ R +P    F++++  +   G  +EA+KL
Sbjct: 440 GLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKL 488



 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 238/466 (51%), Gaps = 16/466 (3%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMAR----RNQIPDFHFCINLIRGLIRIDR 167
           FV  +E+T N ++   C + +LT  SK  +++      ++  PD      +I G  +   
Sbjct: 4   FVAPNERTYNVVVNGLC-KARLT--SKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 168 IEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           +++A ++L+ MV   G+ PD +TY  +V GLC+ G++  A  ++ EM + G EPD  T++
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++    +  K  +A+  +K+ L   C    ++ + LI  +C++  I  A E+  +M + 
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 287 ---GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
                 PD+VTY +L++  CK G  + A+ ++  +  R   PN +TY++LLH L   G  
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           D    +   M      P V TY  LI+GLC    VD A    ++M +  C  D V+YN +
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENG 462
           L   C+ G + EA QL   +   SC P  ITY  L+ G      +E+A  L   M    G
Sbjct: 301 LDGYCRLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAG 360

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           I PD +T+  ++ G+ RA +  EA + ++E+  R        Y  +I GLCK+ +V+ A+
Sbjct: 361 IDPDVVTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAGRVNHAM 420

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +VL+    +  KPD   ++ +++ +     TEEA  L ++++  +V
Sbjct: 421 EVLK----NVDKPDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRV 462



 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 230/457 (50%), Gaps = 19/457 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ---IPDFHFCINLIRGLIRIDRIEKAS 172
           D  +++ ++   C   ++ +A +L   M  R      PD      LI G  +   +EKA 
Sbjct: 150 DAVSSSALITGLCRERRIGEAYELFQEMEMREDGAWKPDVVTYTALIDGFCKSGNLEKAM 209

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L +M     VP+ +TY+ ++ GLCK G +  A+ L   M+  GC P+V+TY T++  +
Sbjct: 210 KMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLFRRMTSKGCVPNVVTYTTLIHGL 269

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K   A     +     CP   ++Y  L++  C+   I  A ++  +MA + C PD 
Sbjct: 270 CAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRLGRIEEAKQLFKEMAAKSCLPDR 329

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNL-LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +TY  LV   C   + ++A  ++ N+  + G++P+ +TY+ ++        +    + + 
Sbjct: 330 ITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVTYSIVVAGYSRAKRFVEAAEFIQ 389

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC-QPDIVTYNTVLGALCKE 410
            M   + +P   TY+ LI+GLCK G V+ A+      V KN  +PD+VTY  V+  LC  
Sbjct: 390 EMIARNVAPNAVTYSSLIDGLCKAGRVNHAME-----VLKNVDKPDVVTYTIVIEGLCGT 444

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
               EAL LL  +      P + T+N++I  L + G M++A  L   M  +G+ P  +T+
Sbjct: 445 DRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTY 504

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV--------IHGLCKSKKVDMAI 522
            TL+ GF R  ++E A +L  E+ +R  K  +SA  LV        I GLCK++++D A+
Sbjct: 505 TTLLEGFSRTGRMEIAYELF-EVMRRKAKKSSSAANLVPEQAFSALIRGLCKAREIDKAM 563

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            V+E + S   +P +     IV  +   G TEEA KL
Sbjct: 564 AVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKL 600



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/425 (27%), Positives = 204/425 (48%), Gaps = 47/425 (11%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  FC  G L  A K++ +M  R  +P+     +L+ GL +   +++A  + 
Sbjct: 188 DVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALDLF 247

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G VP+ +TY  ++ GLC   ++ +A  L+DEM+ + C  D ++YN +L      
Sbjct: 248 RRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYCRL 307

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM-AIEGCSPDIVT 294
           G+ ++A   +K+   K C P  ITYT L+   C    +  A  +L++M    G  PD+VT
Sbjct: 308 GRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDVVT 367

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ +V    +  ++ +A   I  +++R + PN++TY++L+  L   G    V+  ++++ 
Sbjct: 368 YSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVTYSSLIDGLCKAG---RVNHAMEVLK 424

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P V TY I+I GLC     + A+    +MV+K  +P + T+N+V+GALC+ G ++
Sbjct: 425 NVDK-PDVVTYTIVIEGLCGTDRTEEALTLLEEMVNKRVEPSVGTFNSVIGALCRLGDMD 483

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME------------------------- 449
           EA +LL  +      P ++TY TL++G ++ G ME                         
Sbjct: 484 EAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAYELFEVMRRKAKKSSSAANLVPE 543

Query: 450 -----------------KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
                            KAM +  ++      P +     ++ G  RA + EEA  L+  
Sbjct: 544 QAFSALIRGLCKAREIDKAMAVVEELRSRECEPAEEDCLAIVDGLLRAGRTEEAGKLINS 603

Query: 493 IGKRG 497
           I K G
Sbjct: 604 ISKVG 608



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 205/397 (51%), Gaps = 6/397 (1%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            P+  TYN++V GLCK      A  +L EM       PD++TY+T++      G+  +A 
Sbjct: 6   APNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGEMDRAC 65

Query: 243 GFWKDQL-RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              ++ + R G  P ++TYT +++ +C+   + RA E++ +M ++G  PD  T+++L+  
Sbjct: 66  EILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFSALITG 125

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVD--KILDIMNEASH 358
            C   K D+A+ +   +L+     ++++ + L+  L   R   +A +  + +++  + + 
Sbjct: 126 WCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMREDGAW 185

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TY  LI+G CK G +++A+     M  + C P++VTY+++L  LCK G L++AL 
Sbjct: 186 KPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDLDQALD 245

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +    C P ++TY TLI GL     ++ A +L  +M       D +++  L+ G+C
Sbjct: 246 LFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNALLDGYC 305

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM-ISSRYKPDD 537
           R  ++EEA  L KE+  +        Y  ++ G C + +++ A  +LE M  ++   PD 
Sbjct: 306 RLGRIEEAKQLFKEMAAKSCLPDRITYTCLVRGFCNASRLEEARFLLENMKTAAGIDPDV 365

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             +S +V   +      EA +  Q++I   V     T
Sbjct: 366 VTYSIVVAGYSRAKRFVEAAEFIQEMIARNVAPNAVT 402



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 94/320 (29%), Positives = 177/320 (55%), Gaps = 5/320 (1%)

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-EGCSPDIVTYNSLVNFSCKQGK 307
           +R+   P   TY +++  +CK    ++A EVL +M   +  +PD+VTY++++N  CKQG+
Sbjct: 1   MREFVAPNERTYNVVVNGLCKARLTSKAYEVLKEMRDGKSVAPDLVTYSTVINGFCKQGE 60

Query: 308 YDDAVLVINNLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
            D A  ++  +++R GM P+ +TY +++  L   G  D   +++  M      P  FT++
Sbjct: 61  MDRACEILREMVTRDGMAPDVVTYTSVVDGLCRDGKMDRACEMVREMKLKGVEPDKFTFS 120

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL---LHLL 423
            LI G C    VD A+  + ++++ +C+ D V+ + ++  LC+E  + EA +L   + + 
Sbjct: 121 ALITGWCNARKVDEALKLYKEILTSSCRLDAVSSSALITGLCRERRIGEAYELFQEMEMR 180

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
              +  P ++TY  LIDG  K G +EKAM + G M      P+ +T+ +L+ G C+A  +
Sbjct: 181 EDGAWKPDVVTYTALIDGFCKSGNLEKAMKMLGVMEGRKCVPNVVTYSSLLHGLCKAGDL 240

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           ++A+DL + +  +G       Y  +IHGLC + KVD A  +++ M ++    D   ++ +
Sbjct: 241 DQALDLFRRMTSKGCVPNVVTYTTLIHGLCAAHKVDAARLLMDEMTATCCPADTVSYNAL 300

Query: 544 VKKVADDGMTEEAYKLWQKL 563
           +      G  EEA +L++++
Sbjct: 301 LDGYCRLGRIEEAKQLFKEM 320



 Score = 49.3 bits (116), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 35/137 (25%), Positives = 62/137 (45%), Gaps = 9/137 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE    T N ++   C  G + +A KL+  MA     P       L+ G  R  R+E A 
Sbjct: 462 VEPSVGTFNSVIGALCRLGDMDEAWKLLVAMAAHGLEPGMVTYTTLLEGFSRTGRMEIAY 521

Query: 173 KVLQIMVMSGG--------VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           ++ ++M             VP+   ++ ++ GLCK  +I  A+A+++E+    CEP    
Sbjct: 522 ELFEVMRRKAKKSSSAANLVPEQ-AFSALIRGLCKAREIDKAMAVVEELRSRECEPAEED 580

Query: 225 YNTILRTMFDNGKFKQA 241
              I+  +   G+ ++A
Sbjct: 581 CLAIVDGLLRAGRTEEA 597


>gi|125528410|gb|EAY76524.1| hypothetical protein OsI_04465 [Oryza sativa Indica Group]
          Length = 703

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 141/485 (29%), Positives = 240/485 (49%), Gaps = 37/485 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T N +L++ C+RG L  A  L D + RR   PD      L+ GL + DR++ A  +L  
Sbjct: 159 QTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDE 218

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNG 236
           M  SG  PD + YN ++GG  K G+    + + D++    G  P++ TYN +L  +   G
Sbjct: 219 MPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +FK+    W+  +     P +ITY ILI  +C+   +  A  V  ++   G   D   YN
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYN 338

Query: 297 SLVNFSCKQGKYDDAV------------------LVINNLLSRGME-------------- 324
           SLV   C+ G+  +A                   ++I  L   GM               
Sbjct: 339 SLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDV 398

Query: 325 ---PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
              P+++T+ TL+H L   G  +    I +    +     VF+Y+ +INGLC  G +  A
Sbjct: 399 ACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDA 458

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +  + +M    C+P+   YN ++   C+    ++A+++   +  + CSP +ITYNTLIDG
Sbjct: 459 VKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDG 518

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L K    ++A  +  +M+ENG +PD  T+ +LI G     ++++A+ + K+I  +G K+ 
Sbjct: 519 LCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVD 578

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV-FSTIVKKVADDGMTEEAYKLW 560
              + ++IHGLC + KVD A+ V   M   +  P + V ++T++  + + G  ++A  LW
Sbjct: 579 VMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW 638

Query: 561 QKLIE 565
             + E
Sbjct: 639 TSITE 643



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 207/425 (48%), Gaps = 40/425 (9%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           P    +  T N +L   C  G+  +  ++ + M   N  PD      LI GL R   ++ 
Sbjct: 258 PGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDG 317

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A++V   ++ +G V D   YN +V G C+ G+++ A    D    +G   ++ TYN +++
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIK 376

Query: 231 TMFDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
            +FD+G   +AI  W D L K   C P  +T+  LI  +C+     +A  + ++  + G 
Sbjct: 377 GLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             D+ +Y+S++N  C  G+  DAV V   +   G +PNS  YN L+             +
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495

Query: 349 ILDIMNEASHSPTVFTYNILINGLCK-------------------------YGL------ 377
           I   M +   SPTV TYN LI+GLCK                         YG       
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555

Query: 378 ----VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-LLNGSSCSPCL 432
               +D A++ + Q++ K  + D++ +N ++  LC  G ++EAL +   +    +C P L
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           +TYNTL+DGL + G ++KA  L+  + E+G+ PD I++ T I G C  D++ E + LL E
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDE 675

Query: 493 IGKRG 497
           +  RG
Sbjct: 676 VLSRG 680



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 186/364 (51%), Gaps = 9/364 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N +++ FC  G++ +A K  D  A    + +      +I+GL     +++A ++ 
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWD-SAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW 391

Query: 176 QIMVMS-GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            ++      +PDT+T+  ++ GLC+ G    A  + +E  VSG + DV +Y++++  + +
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+   A+  ++   + GC P    Y  LI   C+    + A+ +   MA  GCSP ++T
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L++  CK  KY +A  V   ++  G  P+  TY +L+  L S      +D  L I  
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSD---KKIDDALSIWK 568

Query: 355 EASHSP---TVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKE 410
           +  +      V  +NILI+GLC  G VD A++ F+ M  K NC P++VTYNT++  L + 
Sbjct: 569 QILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYET 628

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G +++A  L   +      P +I+YNT I GL     + + + L  +++  GI P  IT 
Sbjct: 629 GYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITW 688

Query: 471 RTLI 474
             L+
Sbjct: 689 NILV 692



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 197/420 (46%), Gaps = 42/420 (10%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT------------------- 224
            P+  TYN+++  LC RG +  A+ L D +      PD IT                   
Sbjct: 155 APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALD 214

Query: 225 ----------------YNTILRTMFDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQ 266
                           YN +L   F  G+F++ +  W D+L K  G  P L TY ++++ 
Sbjct: 215 LLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVW-DKLVKDPGARPNLATYNVMLDG 273

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +CK        EV + M      PD++TY  L++  C+ G  D A  V + ++  G+  +
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           +  YN+L+      G      K  D    A     + TYNI+I GL   G+VD AI  ++
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWD 392

Query: 387 QMVSKN--CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            ++ K+  C PD VT+ T++  LC+ G  N+A  +      S     + +Y+++I+GL  
Sbjct: 393 -LLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G +  A+ +Y +M ++G  P+   +  LI GFC+  +  +AV +  ++   G       
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I GLCK++K   A  V   M+ + + PD T + ++++ +  D   ++A  +W++++
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 194/388 (50%), Gaps = 9/388 (2%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG----CEPDVITYNTILRTMFDNGKFKQ 240
           P   ++N ++    +  +   A A    +S         P++ TYN +LR++   G   +
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +    R+   P  ITY+ L+  + KQ  +  A+++LD+M   G  PD+V YN+L+ 
Sbjct: 177 AVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVCYNALLG 236

Query: 301 FSCKQGKYDDAVLVINNLLS-RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              K G+++  + V + L+   G  PN  TYN +L  L   G +  V ++ + M   +  
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P V TY ILI+GLC+ G VD A   +++++      D   YN+++   C+ G + EA + 
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS--PDDITHRTLIWGF 477
                G +    L TYN +I GL   G +++A+ L+  ++E  ++  PD +T  TLI G 
Sbjct: 357 WD-SAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGL 414

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+     +A  + +E    G ++   +Y  +I+GLC   ++  A++V E M     KP+ 
Sbjct: 415 CQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNS 474

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +++ ++        T +A +++ K+ +
Sbjct: 475 HIYNALISGFCQVYRTSDAVRIYSKMAD 502



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 167/334 (50%), Gaps = 2/334 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           +T N +++     G + +A +L D++ +    IPD      LI GL +     KA  + +
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
              +SG   D  +Y+ M+ GLC  G++  A+ + ++M   GC+P+   YN ++       
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +   A+  +      GC P +ITY  LI+ +CK      A  V  +M   G +PDI TY 
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL+       K DDA+ +   +L +G++ + + +N L+H L S G  D    +   M E 
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608

Query: 357 SH-SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P + TYN L++GL + G +D+A   +  +     +PDI++YNT +  LC    ++E
Sbjct: 609 KNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +QLL  +      P +IT+N L+  + K G ++
Sbjct: 669 GIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 6/285 (2%)

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL----LSRGMEPNSITYNTLLHSLGS 339
           +I GC+P I ++N+L++   +  ++ DA     +L      R + PN  TYN +L SL +
Sbjct: 111 SILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCA 170

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
           RG  D    + D +     +P   TY+ L+ GL K   +D A++  ++M     QPD+V 
Sbjct: 171 RGDLDRAVTLFDSLRRRQVAPDCITYSTLMCGLAKQDRLDHALDLLDEMPRSGVQPDVVC 230

Query: 400 YNTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           YN +LG   K G   + +++   L+      P L TYN ++DGL K G  ++   ++ +M
Sbjct: 231 YNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERM 290

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           + N + PD IT+  LI G CR+  V+ A  +  EI K G  +  + Y  ++ G C++ +V
Sbjct: 291 VANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRV 350

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             A +  +    +  +   T ++ ++K + D GM +EA +LW  L
Sbjct: 351 QEAWKFWDSAGFAGLRNLRT-YNIMIKGLFDSGMVDEAIELWDLL 394



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 49/225 (21%), Positives = 100/225 (44%), Gaps = 44/225 (19%)

Query: 349 ILDIMNEASHSPTVFTYN---ILINGLCKYGLVDRAINSFNQMVS-KNCQPDIVTYNTVL 404
           +L+++    H P  F+ +   ++++   +  + D A+++F  + S   C P I ++N +L
Sbjct: 68  LLNLLPRLRHRPR-FSESAALVVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALL 126

Query: 405 GALCKEGMLNEA----LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
            A  +    ++A      L H   G   +P L TYN ++  L  +G +++A+ L+  +  
Sbjct: 127 DAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRR 186

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
             ++PD IT+ TL+   C                                GL K  ++D 
Sbjct: 187 RQVAPDCITYSTLM---C--------------------------------GLAKQDRLDH 211

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           A+ +L+ M  S  +PD   ++ ++      G  E+  ++W KL++
Sbjct: 212 ALDLLDEMPRSGVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVK 256


>gi|357499975|ref|XP_003620276.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495291|gb|AES76494.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 590

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 233/444 (52%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  G +  A  +   + +   +PD      L +GL    +I++A      +V 
Sbjct: 124 NILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVA 183

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D I+Y  ++ GLCK G+ R+A+ LL  +  +  +P+V+ YNTI+ +M       +
Sbjct: 184 LGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNE 243

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + + KG  P ++TY+ LI   C    +  AI++ + M +E   PD+ T+N LVN
Sbjct: 244 AFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVN 303

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK GK  +   V + ++ +G++PN +TYN+L+         +    I + M +   +P
Sbjct: 304 AFCKDGKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNP 363

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + +Y+I+ING CK    D A+N F +M  KN  PD+VTY++++  L K G ++ ALQL+
Sbjct: 364 DIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLV 423

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++     P + TYN+++D L K   ++KA+ L  +  + G  PD  T+  LI G C++
Sbjct: 424 DQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQS 483

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++E+A  + +++  +G  +   AY ++I G C     + A+ +L  M  +   PD   +
Sbjct: 484 GKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTY 543

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
             I+  +      + A KL +++I
Sbjct: 544 EIIILSLFKKDENDMAEKLLREMI 567



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 227/443 (51%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           NKIL +            L   M  R   P+   C  LI    ++  I  A  V   ++ 
Sbjct: 89  NKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILK 148

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G VPDTIT+  +  GLC +GQI+ A    D++   G   D I+Y T++  +   G+ + 
Sbjct: 149 MGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRA 208

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +        P ++ Y  +I+ +CK   +  A ++  +M  +G SPD+VTY++L++
Sbjct: 209 ALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALIS 268

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  GK  DA+ + N ++   ++P+  T+N L+++    G       + D+M +    P
Sbjct: 269 GFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKP 328

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN L++G C    V++A + FN M      PDI +Y+ ++   CK    +EA+ L 
Sbjct: 329 NFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLF 388

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++  +  P ++TY++LIDGL+K G +  A+ L  QM + G+ P+  T+ +++   C+ 
Sbjct: 389 KEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKT 448

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            QV++A+ LL +   +G +   S Y ++I GLC+S K++ A +V E ++   Y  D   +
Sbjct: 449 HQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAY 508

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + +++    +G+  EA  L  K+
Sbjct: 509 TIMIQGFCVEGLFNEALALLSKM 531



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 241/488 (49%), Gaps = 13/488 (2%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDPSLP--SSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +SH   V KK +     K +H   +P  SS   F+     +       F S   + DA  
Sbjct: 19  DSHF--VPKKFQSFQFLKNTHFNFIPYSSSKINFISYSSTSTT-----FHSNNDVDDAVS 71

Query: 139 LIDIMARRNQIPDFHFCINLIRG-LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           L + + RRN  P   F  N I G L++         + Q M   G  P+ +  N+++   
Sbjct: 72  LFNRLLRRNTTPP-AFEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNCNILINCF 130

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C+ G I  A ++  ++   G  PD IT+ T+ + +   G+ +QA  F    +  G     
Sbjct: 131 CQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLKGQIQQAFLFHDKVVALGFHFDQ 190

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           I+Y  LI  +CK      A+++L  +      P++V YN++++  CK    ++A  + + 
Sbjct: 191 ISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSE 250

Query: 318 LLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
           ++S+G+ P+ +TY+ L+      G   DA+D + + M   +  P V+T+NIL+N  CK G
Sbjct: 251 MVSKGISPDVVTYSALISGFCILGKLKDAID-LFNKMILENIKPDVYTFNILVNAFCKDG 309

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +      F+ M+ +  +P+ VTYN+++   C    +N+A  + + +     +P + +Y+
Sbjct: 310 KMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYS 369

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            +I+G  K    ++AM L+ +M    I PD +T+ +LI G  ++ ++  A+ L+ ++  R
Sbjct: 370 IMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDR 429

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       Y  ++  LCK+ +VD AI +L       ++PD + +S ++K +   G  E+A
Sbjct: 430 GVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDA 489

Query: 557 YKLWQKLI 564
            K+++ L+
Sbjct: 490 RKVFEDLL 497



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 194/382 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ +   ++   C  G+   A  L+  +      P+      +I  + ++  + +A  + 
Sbjct: 189 DQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLF 248

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  PD +TY+ ++ G C  G+++ AI L ++M +   +PDV T+N ++     +
Sbjct: 249 SEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKD 308

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK K+    +   +++G  P  +TY  L++  C    + +A  + + MA  G +PDI +Y
Sbjct: 309 GKMKEGKTVFDMMMKQGIKPNFVTYNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSY 368

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + ++N  CK  K+D+A+ +   +  + + P+ +TY++L+  L   G      +++D M++
Sbjct: 369 SIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHD 428

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN +++ LCK   VD+AI    +   K  QPDI TY+ ++  LC+ G L +
Sbjct: 429 RGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLED 488

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A ++   L     +  +  Y  +I G   +G   +A+ L  +M +NG  PD  T+  +I 
Sbjct: 489 ARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIIL 548

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
              + D+ + A  LL+E+  RG
Sbjct: 549 SLFKKDENDMAEKLLREMIARG 570



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 172/359 (47%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L   DG  V+ +    N I+ + C    + +A  L   M  +   PD      LI G   
Sbjct: 213 LQRVDGNLVQPNVVMYNTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCI 272

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           + +++ A  +   M++    PD  T+N++V   CK G+++    + D M   G +P+ +T
Sbjct: 273 LGKLKDAIDLFNKMILENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMKQGIKPNFVT 332

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN+++       +  +A   +    + G  P + +Y+I+I   CK      A+ +  +M 
Sbjct: 333 YNSLMDGYCLVKEVNKAKSIFNTMAQGGVNPDIQSYSIMINGFCKIKKFDEAMNLFKEMH 392

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +   PD+VTY+SL++   K G+   A+ +++ +  RG+ PN  TYN++L +L      D
Sbjct: 393 RKNIIPDVVTYSSLIDGLSKSGRISYALQLVDQMHDRGVPPNICTYNSILDALCKTHQVD 452

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +L    +    P + TY+ILI GLC+ G ++ A   F  ++ K    D+  Y  ++
Sbjct: 453 KAIALLTKFKDKGFQPDISTYSILIKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTIMI 512

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
              C EG+ NEAL LL  +  + C P   TY  +I  L KK   + A  L  +M+  G+
Sbjct: 513 QGFCVEGLFNEALALLSKMEDNGCIPDAKTYEIIILSLFKKDENDMAEKLLREMIARGL 571



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 76/275 (27%), Positives = 123/275 (44%)

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           + ++Y+S           DDAV + N LL R   P +  +N +L SL     +  V  + 
Sbjct: 49  NFISYSSTSTTFHSNNDVDDAVSLFNRLLRRNTTPPAFEFNKILGSLVKSKHYHTVLYLS 108

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M      P +   NILIN  C+ GL+  A + F +++     PD +T+ T+   LC +
Sbjct: 109 QKMEFRGIKPNLVNCNILINCFCQLGLIPFAFSVFAKILKMGYVPDTITFTTLSKGLCLK 168

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G + +A      +         I+Y TLI GL K G    A+ L  ++  N + P+ + +
Sbjct: 169 GQIQQAFLFHDKVVALGFHFDQISYGTLIHGLCKVGETRAALDLLQRVDGNLVQPNVVMY 228

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            T+I   C+   V EA DL  E+  +G       Y  +I G C   K+  AI +   MI 
Sbjct: 229 NTIIDSMCKVKLVNEAFDLFSEMVSKGISPDVVTYSALISGFCILGKLKDAIDLFNKMIL 288

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              KPD   F+ +V     DG  +E   ++  +++
Sbjct: 289 ENIKPDVYTFNILVNAFCKDGKMKEGKTVFDMMMK 323



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 111/214 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D ++ + ++  FC   K  +A  L   M R+N IPD     +LI GL +  RI  A 
Sbjct: 361 VNPDIQSYSIMINGFCKIKKFDEAMNLFKEMHRKNIIPDVVTYSSLIDGLSKSGRISYAL 420

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +++  M   G  P+  TYN ++  LCK  Q+  AIALL +    G +PD+ TY+ +++ +
Sbjct: 421 QLVDQMHDRGVPPNICTYNSILDALCKTHQVDKAIALLTKFKDKGFQPDISTYSILIKGL 480

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +GK + A   ++D L KG    +  YTI+I+  C +     A+ +L  M   GC PD 
Sbjct: 481 CQSGKLEDARKVFEDLLVKGYNLDVYAYTIMIQGFCVEGLFNEALALLSKMEDNGCIPDA 540

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
            TY  ++    K+ + D A  ++  +++RG+  N
Sbjct: 541 KTYEIIILSLFKKDENDMAEKLLREMIARGLPLN 574


>gi|224103961|ref|XP_002313262.1| predicted protein [Populus trichocarpa]
 gi|222849670|gb|EEE87217.1| predicted protein [Populus trichocarpa]
          Length = 559

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 121/384 (31%), Positives = 215/384 (55%), Gaps = 2/384 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           +PD ++YN ++ GLCK  ++  A+ LL EM  S CEP+  TY  ++  +   G+ ++A+ 
Sbjct: 7   LPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMR 66

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
              +  RKG    ++ Y+ LI   C +  + R   + D+M  +G SP++V Y+ L+N  C
Sbjct: 67  LLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFC 126

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K+G + +A  V++ +  RG++P+  TY  ++  L   G       + D+M E    P+  
Sbjct: 127 KKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTV 186

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN+LINGLCK G +  A   F  M+ K  + ++V+YNT++  LC  G L+EA++L   L
Sbjct: 187 TYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSL 246

Query: 424 --NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
             +G+   P +IT+NT+I GL K+G ++KA+ +Y  M+E G   +  T   LI  + ++ 
Sbjct: 247 LEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSG 306

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            +++A++L K + K G    ++ Y ++I G CK   ++ A  +   M  S   P    ++
Sbjct: 307 IIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYN 366

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
           T++  +  +   E+A +L+Q++ E
Sbjct: 367 TLMASLCKESSLEQARRLFQEMKE 390



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 137/489 (28%), Positives = 243/489 (49%), Gaps = 4/489 (0%)

Query: 84  VLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           +++ N  + GL   K+       L   +G   E +  T   ++   C  G++ +A +L+ 
Sbjct: 10  IVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRLLG 69

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            M R+    D      LI G      +++   +   M+  G  P+ + Y+ ++ G CK+G
Sbjct: 70  EMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCKKG 129

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
             R A A+L  M+  G +PDV TY  ++  +  +G+ ++A+  +     KG  P  +TY 
Sbjct: 130 LWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVTYN 189

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           +LI  +CK+  I  A ++ + M  +G   ++V+YN+L+   C  GK D+A+ + ++LL  
Sbjct: 190 VLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLLED 249

Query: 322 G--MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           G  +EP+ IT+NT++  L   G  D   +I D M E      +FT +ILI    K G++D
Sbjct: 250 GNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGIID 309

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +A+  + ++      P   TY+ ++   CK  MLN A  L   +  S  SP L  YNTL+
Sbjct: 310 KAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTLM 369

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
             L K+  +E+A  L+ +M E+   PD I+   +I G  +A  +  A +LL ++ + G  
Sbjct: 370 ASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGLT 429

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y   I+ L K  +++ A    + MI+S   PD+ V+ +++K    +   EE   L
Sbjct: 430 PDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLNDEIEEVINL 489

Query: 560 WQKLIEWKV 568
            +++ +  V
Sbjct: 490 LRQMADMGV 498



 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 129/423 (30%), Positives = 211/423 (49%), Gaps = 2/423 (0%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M R N +PD      +I GL +  R+EKA  +L  M  S   P++ TY +++ GLCK G+
Sbjct: 1   MKRINILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGR 60

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +  A+ LL EM   G E DV+ Y+T++      G   +    + + L KG  P ++ Y+ 
Sbjct: 61  VEEAMRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSC 120

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI   CK+     A  VL  M   G  PD+ TY  ++   CK G+   A+ + + +  +G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            EP+++TYN L++ L   GC     KI + M E      V +YN LI GLC  G +D A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 383 NSFNQMVSKN--CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
             F+ ++      +PD++T+NTV+  LCKEG L++A+++   +        L T + LI 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
              K G ++KAM L+ ++ + G+ P   T+  +I GFC+   +  A  L   +   G   
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  ++  LCK   ++ A ++ + M  S  +PD   F+ ++      G    A +L 
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 561 QKL 563
             +
Sbjct: 421 NDM 423



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 214/408 (52%), Gaps = 5/408 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC +G   +A+ ++  M  R   PD +    +I GL +  R  KA  +  +M   G
Sbjct: 121 LINGFCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKG 180

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P T+TYN+++ GLCK G I  A  + + M   G   +V++YNT++  + +NGK  +A+
Sbjct: 181 EEPSTVTYNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAM 240

Query: 243 GFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
             +   L  G    P +IT+  +I+ +CK+  + +A+E+ D M   G   ++ T + L+ 
Sbjct: 241 KLFSSLLEDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIG 300

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G  D A+ +   +   G+ P+S TY+ ++         +    +   M  +  SP
Sbjct: 301 EYIKSGIIDKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           T+F YN L+  LCK   +++A   F +M   NC+PD +++N ++    K G ++ A +LL
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           + +     +P   TY++ I+ L+K G ME+A   +  M+ +GI+PD+  + +LI GF   
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLN 480

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           D++EE ++LL+++   G  +       ++  LC S +    + V+EL+
Sbjct: 481 DEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAE---HLHVMELL 525



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 98/322 (30%), Positives = 176/322 (54%), Gaps = 2/322 (0%)

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P +++Y  +I  +CK+  + +A+++L +M    C P+  TY  L++  CK+G+ ++A+ +
Sbjct: 8   PDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEAMRL 67

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +  +  +G+E + + Y+TL+    S+GC D    + D M E   SP V  Y+ LING CK
Sbjct: 68  LGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLINGFCK 127

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            GL   A    + M  +  QPD+ TY  ++G LCK+G   +AL L  L+      P  +T
Sbjct: 128 KGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPSTVT 187

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           YN LI+GL K+GC+  A  ++  M+E G   + +++ TLI G C   +++EA+ L   + 
Sbjct: 188 YNVLINGLCKEGCIGDAFKIFETMLEKGKRLEVVSYNTLIMGLCNNGKLDEAMKLFSSLL 247

Query: 495 KRGNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + GN +      +  VI GLCK  ++D A+++ + MI      +      ++ +    G+
Sbjct: 248 EDGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGI 307

Query: 553 TEEAYKLWQKLIEWKVFEKGTT 574
            ++A +LW+++ +  +    TT
Sbjct: 308 IDKAMELWKRVHKLGLVPSSTT 329



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 71/259 (27%), Positives = 133/259 (51%), Gaps = 3/259 (1%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG +VE D  T N ++Q  C  G+L  A ++ D M  R    +   C  LI   I+   I
Sbjct: 249 DGNYVEPDVITFNTVIQGLCKEGRLDKAVEIYDTMIERGSFGNLFTCHILIGEYIKSGII 308

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           +KA ++ + +   G VP + TY++M+ G CK   +  A  L   M +SG  P +  YNT+
Sbjct: 309 DKAMELWKRVHKLGLVPSSTTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSPTLFDYNTL 368

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           + ++      +QA   +++     C P  I++ I+I+   K   I  A E+L+DM   G 
Sbjct: 369 MASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELLNDMQQMGL 428

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +PD  TY+S +N   K G+ ++A    +++++ G+ P++  Y++L+   G     D +++
Sbjct: 429 TPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLN---DEIEE 485

Query: 349 ILDIMNEASHSPTVFTYNI 367
           +++++ + +    +    I
Sbjct: 486 VINLLRQMADMGVILDLEI 504



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 61/209 (29%), Positives = 103/209 (49%), Gaps = 35/209 (16%)

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP-----CL-------------- 432
           N  PDIV+YNT++  LCKE  L +A+ LL  + GSSC P     C+              
Sbjct: 5   NILPDIVSYNTIINGLCKEKRLEKAVDLLVEMEGSSCEPNSFTYCILMDGLCKEGRVEEA 64

Query: 433 ----------------ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
                           + Y+TLI G   KGC+++   L+ +M+E GISP+ + +  LI G
Sbjct: 65  MRLLGEMKRKGLEVDVVVYSTLISGFCSKGCLDRGKALFDEMLEKGISPNVVVYSCLING 124

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           FC+     EA  +L  + +RG +     Y  +I GLCK  +   A+ + +LM     +P 
Sbjct: 125 FCKKGLWREATAVLHTMTERGIQPDVYTYTCMIGGLCKDGRARKALDLFDLMTEKGEEPS 184

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              ++ ++  +  +G   +A+K+++ ++E
Sbjct: 185 TVTYNVLINGLCKEGCIGDAFKIFETMLE 213



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 66/244 (27%), Positives = 106/244 (43%), Gaps = 10/244 (4%)

Query: 92  RGLTITKKSHDPSL-PSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           + + + K+ H   L PSS          T + ++  FC    L  A  L   M      P
Sbjct: 310 KAMELWKRVHKLGLVPSS---------TTYSVMIDGFCKMHMLNFAKGLFSRMKISGLSP 360

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
                  L+  L +   +E+A ++ Q M  S   PDTI++N+M+ G  K G I SA  LL
Sbjct: 361 TLFDYNTLMASLCKESSLEQARRLFQEMKESNCEPDTISFNIMIDGTLKAGDIHSAKELL 420

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
           ++M   G  PD  TY++ +  +   G+ ++A G +   +  G  P    Y  LI+     
Sbjct: 421 NDMQQMGLTPDAYTYSSFINRLSKLGQMEEAKGAFDSMIASGITPDNHVYDSLIKGFGLN 480

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             I   I +L  MA  G   D+   NS++ F C   ++   + ++ N  S      SI+ 
Sbjct: 481 DEIEEVINLLRQMADMGVILDLEITNSILTFLCNSAEHLHVMELLPNFSSESSGGTSISC 540

Query: 331 NTLL 334
           + LL
Sbjct: 541 DKLL 544


>gi|22128712|gb|AAM92824.1| putative chloroplast RNA processing protein [Oryza sativa Japonica
           Group]
          Length = 878

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 251/518 (48%), Gaps = 42/518 (8%)

Query: 84  VLAVNKKLRGLTITKKSHDP-----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           V + N  L+GL    +S +       +    G     D  + N +L  F   G    A  
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
               M  R  +PD     ++I  L +   ++KA +VL  MV +G +PD +TYN ++ G C
Sbjct: 223 TYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 282

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
             GQ + AI  L +M   G EP+V+TY++++  +  NG+  +A   +    ++G  P + 
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342

Query: 259 TY-----------------------------------TILIEQVCKQCGIARAIEVLDDM 283
           TY                                    ILI    KQ  + +A+ V   M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G +P++V Y ++++  CK G  DDA+L    ++  G+ PN I Y +L+H L +   W
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 344 DAVDK-ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           D  ++ IL++++      T+F +N +I+  CK G V  +   F+ MV    +PDI+TYNT
Sbjct: 463 DKAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C  G ++EA +LL  +      P ++TY TLI+G  +   M+ A+ L+ +M+ +G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +SP+ IT+  ++ G     +   A +L   I K G ++  S Y +++HGLCK+   D A+
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           ++ + +  +  + +   F+ ++  +   G  +EA  L+
Sbjct: 642 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 679



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 228/460 (49%), Gaps = 10/460 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ----IPDFHFCINLIRGLIRIDRIEKA 171
           D  T   +L+  C+  + +DA   +DI+ RR      IPD     NL++GL   +R ++A
Sbjct: 126 DAITFTPLLKGLCADKRTSDA---MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEA 182

Query: 172 SKVLQIMV---MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            ++L +M      G  PD ++YN ++ G  K G    A +   EM   G  PDV+TY++I
Sbjct: 183 LELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSI 242

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +       +A+      ++ G  P  +TY  ++   C       AI  L  M  +G 
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P++VTY+SL+N+ CK G+  +A  + +++  RG+EP+  TY TLL    ++G    +  
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHA 362

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +LD+M      P    +NILI    K   VD+A+  F++M      P++V Y TV+  LC
Sbjct: 363 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G +++A+     +     +P +I Y +LI GL      +KA  L  +M++ GI  + I
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTI 482

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
              ++I   C+  +V E+  L   + + G K     Y  +I G C + K+D A ++L  M
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +S   KPD   + T++         ++A  L+++++   V
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 208/419 (49%), Gaps = 12/419 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + D + RR +    +    L R L  + R   A+ V +   M  +G     P   T
Sbjct: 38  DARHVFDELLRRGRGASIY---GLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHT 94

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C+ G++    A L  +   G   D IT+  +L+ +  + +   A+     ++
Sbjct: 95  YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE---GCSPDIVTYNSLVNFSCKQ 305
            + GC P + +Y  L++ +C +     A+E+L  MA +   G  PD+V+YN+++N   K+
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G  D A    + +L RG+ P+ +TY++++ +L      D   ++L+ M +    P   TY
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N +++G C  G    AI +  +M S   +P++VTY++++  LCK G   EA ++   +  
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P + TY TL+ G A KG + +   L   M+ NGI PD      LI  + + ++V++
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           A+ +  ++ + G       Y  VI  LCKS  VD A+   E MI     P+  V+++++
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 211/444 (47%), Gaps = 2/444 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE +  T + ++   C  G+ T+A K+ D M +R   PD      L++G      
Sbjct: 299 SDG--VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  PD   +N+++    K+ ++  A+ +  +M   G  P+V+ Y T
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G    A+ +++  + +G  P +I YT LI  +C      +A E++ +M   G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              + + +NS+++  CK+G+  ++  + + ++  G++P+ ITYNTL+      G  D   
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P + TY  LING C+   +D A+  F +MVS    P+I+TYN +L  L
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
                   A +L   +  S     L TYN ++ GL K    ++A+ ++  +    +  + 
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 656

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  +++EA DL       G       Y L+   L +   ++    +   
Sbjct: 657 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLS 716

Query: 528 MISSRYKPDDTVFSTIVKKVADDG 551
           M  +    D  + ++IV+K+   G
Sbjct: 717 MEENGCSADSRMLNSIVRKLLQRG 740



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 173/409 (42%), Gaps = 70/409 (17%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T   +LQ + ++G L +   L+D+M R    PD H    LI    + +++++A 
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI---- 228
            V   M   G  P+ + Y  ++  LCK G +  A+   ++M   G  P++I Y ++    
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456

Query: 229 ----------------------LRTMFDN---------GKFKQAIGFWKDQLRKGCPPYL 257
                                 L T+F N         G+  ++   +   +R G  P +
Sbjct: 457 CTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 516

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           ITY  LI+  C    +  A ++L  M   G  PDIVTY +L+N  C+  + DDA+ +   
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576

Query: 318 LLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIM---------------------NE 355
           ++S G+ PN ITYN +L  L  +R    A +  + I                      N 
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636

Query: 356 ASHSPTVF-------------TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
              +  +F             T+NI+I  L K G +D A + F    +    PD+ TY+ 
Sbjct: 637 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
           +   L ++G L E   L   +  + CS      N+++  L ++G + +A
Sbjct: 697 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 140/302 (46%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C+  K   A +LI  M  R    +  F  ++I    +  R+ ++ K+  +MV  G
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD ITYN ++ G C  G++  A  LL  M   G +PD++TY T++       +   A+
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +K+ +  G  P +ITY I+++ +      A A E+   +   G   ++ TYN +++  
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK    D+A+ +  NL    ++  + T+N ++ +L   G  D    +    +     P V
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+++   L + G ++   + F  M    C  D    N+++  L + G +  A   L +
Sbjct: 692 RTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFM 751

Query: 423 LN 424
           ++
Sbjct: 752 ID 753



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 35/284 (12%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ + C  G++ ++ KL D+M R    PD      LI G     ++++A+K+L  MV 
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TY  ++ G C+  ++  A+AL  EM  SG  P++ITYN IL+ +F   +   
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 604

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCK------------------------------- 269
           A   +    + G    L TY I++  +CK                               
Sbjct: 605 AKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 664

Query: 270 ---QCG-IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
              +CG +  A ++    +  G  PD+ TY+ +     +QG  ++   +  ++   G   
Sbjct: 665 ALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSA 724

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +S   N+++  L  RG        L +++E   S    T + L+
Sbjct: 725 DSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 768


>gi|147798083|emb|CAN67256.1| hypothetical protein VITISV_039434 [Vitis vinifera]
          Length = 722

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/419 (29%), Positives = 236/419 (56%), Gaps = 7/419 (1%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           IPD +   + I GL ++ RI +A+K++  M++ G  P++ TY +++ GLC+ G++  A  
Sbjct: 284 IPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARM 343

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ-LRKGCPPYLITYTILIEQV 267
           LL+++      P+V+ +NT++      G+  +A     +  L  GC P + TY  LI  +
Sbjct: 344 LLNKVP----NPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGL 399

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CK+  +  A E++++M I+GC P+++TY  L++  CK+G+ ++A  V++ +  +G+  N+
Sbjct: 400 CKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNA 459

Query: 328 ITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           + YN L+ +L       DA++   D M+     P +FT+N LI GLCK    + A+  + 
Sbjct: 460 VGYNCLISALCKDEKVQDALNMFGD-MSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 518

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M+ +    + +TYNT++ A  + G + EAL+L++ +    C    ITYN LI  L + G
Sbjct: 519 DMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAG 578

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +EK + L+  MM  G++P++I+   LI G CR   ++ A++ L+++  RG       Y 
Sbjct: 579 NIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYN 638

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +I+GLCK+ +   A+ + + +      PD   ++T++     +GM ++A+ L  + ++
Sbjct: 639 SLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVD 697



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/444 (31%), Positives = 226/444 (50%), Gaps = 9/444 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C   ++  A  L+  M R   +P+      LI  L ++ R+ +  K+L+ M++ G
Sbjct: 223 VMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMG 282

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD  T+N  + GLCK  +I  A  L+D M + G  P+  TY  ++  +   GK  +A 
Sbjct: 283 CIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA- 341

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL-DDMAIEGCSPDIVTYNSLVNF 301
              +  L K   P ++ +  LI     +  +  A  V+ + M   GC PDI TYN+L+  
Sbjct: 342 ---RMLLNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILG 398

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK+G    A  ++N +  +G EPN ITY  L+      G  +    +LD M+    +  
Sbjct: 399 LCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALN 458

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
              YN LI+ LCK   V  A+N F  M SK C+PDI T+N+++  LCK     EAL L  
Sbjct: 459 AVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQ 518

Query: 422 --LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
             LL G   +   ITYNTLI    ++G M++A+ L   M+  G   DDIT+  LI   CR
Sbjct: 519 DMLLEGVIANT--ITYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCR 576

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A  +E+ + L +++  +G    N +  ++I+GLC++  +  A++ L  MI     PD   
Sbjct: 577 AGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVT 636

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           +++++  +   G  +EA  L+ KL
Sbjct: 637 YNSLINGLCKTGRAQEALNLFDKL 660



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 230/441 (52%), Gaps = 7/441 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N  +   C   ++ +A+KL+D M  R   P+      L+ GL R+ ++++A  +L
Sbjct: 286 DVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEARMLL 345

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFD 234
             +      P+ + +N ++ G   RG++  A A++ E  +S GC PD+ TYNT++  +  
Sbjct: 346 NKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCK 401

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G    A     +   KGC P +ITYTILI++ CK+  +  A  VLD+M+ +G + + V 
Sbjct: 402 KGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVG 461

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILDIM 353
           YN L++  CK  K  DA+ +  ++ S+G +P+  T+N+L+  L     ++ A+    D++
Sbjct: 462 YNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E   + T+ TYN LI+   + G +  A+   N M+ + C  D +TYN ++ ALC+ G +
Sbjct: 522 LEGVIANTI-TYNTLIHAFLRRGAMQEALKLVNDMLFRGCPLDDITYNGLIKALCRAGNI 580

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            + L L   +     +P  I+ N LI+GL + G ++ A+     M+  G++PD +T+ +L
Sbjct: 581 EKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQHALEFLRDMIHRGLTPDIVTYNSL 640

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+  + +EA++L  ++   G       Y  +I   CK    D A  +L   + S +
Sbjct: 641 INGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISWHCKEGMFDDAHLLLSRGVDSGF 700

Query: 534 KPDDTVFSTIVKKVADDGMTE 554
            P++  +  +V     +G  E
Sbjct: 701 IPNEVTWYILVSNFIKEGDQE 721



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 204/392 (52%), Gaps = 5/392 (1%)

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V   M+  G  P   T+ +++  LC   ++ SA ALL +M+  GC P+ I Y T++  + 
Sbjct: 204 VFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALX 263

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+  + +   ++ L  GC P + T+   I  +CK   I  A +++D M + G +P+  
Sbjct: 264 KVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSF 323

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL-DI 352
           TY  L++  C+ GK D+A +++N + +    PN + +NTL++   SRG  D    ++ + 
Sbjct: 324 TYGVLMHGLCRMGKVDEARMLLNKVPN----PNVVLFNTLINGYVSRGRLDEAKAVMHES 379

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P +FTYN LI GLCK G +  A    N+M  K C+P+++TY  ++   CKEG 
Sbjct: 380 MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 439

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L EA  +L  ++G   +   + YN LI  L K   ++ A+ ++G M   G  PD  T  +
Sbjct: 440 LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 499

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI+G C+ ++ EEA+ L +++   G       Y  +IH   +   +  A++++  M+   
Sbjct: 500 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 559

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              DD  ++ ++K +   G  E+   L++ ++
Sbjct: 560 CPLDDITYNGLIKALCRAGNIEKGLALFEDMM 591



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/349 (30%), Positives = 183/349 (52%), Gaps = 4/349 (1%)

Query: 101 HDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIR 160
           H+  L    GP    D  T N ++   C +G L  A +L++ M  +   P+      LI 
Sbjct: 377 HESMLSVGCGP----DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 432

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
              +  R+E+A  VL  M   G   + + YN ++  LCK  +++ A+ +  +MS  GC+P
Sbjct: 433 RFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 492

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D+ T+N+++  +    KF++A+G ++D L +G     ITY  LI    ++  +  A++++
Sbjct: 493 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 552

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           +DM   GC  D +TYN L+   C+ G  +  + +  +++S+G+ PN+I+ N L++ L   
Sbjct: 553 NDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 612

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G      + L  M     +P + TYN LINGLCK G    A+N F+++  +   PD +TY
Sbjct: 613 GNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITY 672

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           NT++   CKEGM ++A  LL     S   P  +T+  L+    K+G  E
Sbjct: 673 NTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 721



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 195/381 (51%), Gaps = 5/381 (1%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P   +YN+++  L      +    +  EM   G  P V T+  +++ +    +   A   
Sbjct: 180 PTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALCLVNEVDSACAL 239

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            KD  R GC P  I Y  LI  + K   +   +++L++M + GC PD+ T+N  ++  CK
Sbjct: 240 LKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVNTFNDAIHGLCK 299

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             +  +A  +++ +L RG  PNS TY  L+H L   G    VD+   ++N+  + P V  
Sbjct: 300 MLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMG---KVDEARMLLNKVPN-PNVVL 355

Query: 365 YNILINGLCKYGLVDRAINSFNQ-MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           +N LING    G +D A    ++ M+S  C PDI TYNT++  LCK+G L  A +L++ +
Sbjct: 356 FNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEM 415

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
               C P +ITY  LID   K+G +E+A  +  +M   G++ + + +  LI   C+ ++V
Sbjct: 416 QIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKV 475

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           ++A+++  ++  +G K     +  +I GLCK  K + A+ + + M+      +   ++T+
Sbjct: 476 QDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTL 535

Query: 544 VKKVADDGMTEEAYKLWQKLI 564
           +      G  +EA KL   ++
Sbjct: 536 IHAFLRRGAMQEALKLVNDML 556



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 109/357 (30%), Positives = 182/357 (50%), Gaps = 5/357 (1%)

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           LLD   V  CEP   +YN +L  +      K     + + L KG  P + T+ ++++ +C
Sbjct: 169 LLDMRGVYSCEPTFRSYNVVLDVLLAGNCPKVVPNVFYEMLSKGISPTVYTFGVVMKALC 228

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
               +  A  +L DM   GC P+ + Y +L++   K G+ ++ + ++  +L  G  P+  
Sbjct: 229 LVNEVDSACALLKDMTRHGCVPNAIVYQTLIHALXKVGRVNEVLKLLEEMLLMGCIPDVN 288

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           T+N  +H L          K++D M     +P  FTY +L++GLC+ G VD A      +
Sbjct: 289 TFNDAIHGLCKMLRIHEAAKLVDRMLLRGFTPNSFTYGVLMHGLCRMGKVDEA----RML 344

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGC 447
           ++K   P++V +NT++      G L+EA  ++H  +    C P + TYNTLI GL KKG 
Sbjct: 345 LNKVPNPNVVLFNTLINGYVSRGRLDEAKAVMHESMLSVGCGPDIFTYNTLILGLCKKGY 404

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +  A  L  +M   G  P+ IT+  LI  FC+  ++EEA ++L E+  +G  +    Y  
Sbjct: 405 LVSARELMNEMQIKGCEPNVITYTILIDRFCKEGRLEEARNVLDEMSGKGLALNAVGYNC 464

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +I  LCK +KV  A+ +   M S   KPD   F++++  +      EEA  L+Q ++
Sbjct: 465 LISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNSLIFGLCKVNKFEEALGLYQDML 521


>gi|242036829|ref|XP_002465809.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
 gi|241919663|gb|EER92807.1| hypothetical protein SORBIDRAFT_01g046200 [Sorghum bicolor]
          Length = 649

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 123/450 (27%), Positives = 236/450 (52%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T+N ++      G +  A  L+D MA +   P      ++++GL +  R +KA +V 
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVF 250

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      PD  ++N+++GG C+ G++  A+    EM   G  PDV++++ ++      
Sbjct: 251 RAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTR 310

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A  + ++    G  P  + YT++I   C+   ++ A+ V D+M   GC PD+VTY
Sbjct: 311 GKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTY 370

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  CKQ +  DA  ++N +  RG+ P+  T+ TL+H     G ++   ++ D +  
Sbjct: 371 NTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLH 430

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V  YN LI+G+C+ G + +A   ++ M ++   P+ VTY+ ++ + C++G + E
Sbjct: 431 QRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEE 490

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A   L  +      P ++TYN++I G  + G ++K      +MM++ I PD IT  TLI 
Sbjct: 491 AFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIH 550

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+ + + +  A ++   + K   +     Y ++I+G  +   ++ A +V + M +S  +P
Sbjct: 551 GYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEP 610

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   + +++      G ++EA++L  +++ 
Sbjct: 611 DRYTYMSLINGHVTAGNSKEAFQLHDEMMH 640



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 215/419 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+  C   +   A ++   M + +  PD      LI G  R+  +E+A K  + M
Sbjct: 229 TFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEM 288

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD ++++ ++G    RG++  A A L EM   G  PD + Y  ++      G  
Sbjct: 289 QQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSM 348

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+    + +  GC P ++TY  L+  +CKQ  +  A E+L++M   G +PD+ T+ +L
Sbjct: 349 SEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTL 408

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C+ G ++ A+ + + LL + + P+ + YN+L+  +  +G     +++ D M+    
Sbjct: 409 IHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREI 468

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY+ILI+  C+ G V+ A    ++MVSK   P+I+TYN+++   C+ G + +  Q
Sbjct: 469 FPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQ 528

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            L  +   +  P LIT+NTLI G  K+  M  A  ++  M +  + PD +T+  +I GF 
Sbjct: 529 FLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFS 588

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
               +EEA  + K++G  G +     Y  +I+G   +     A Q+ + M+   + PDD
Sbjct: 589 EQGNMEEAGRVFKKMGASGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPDD 647



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/385 (30%), Positives = 201/385 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D ++ N ++  FC  G++ +A K    M +R   PD      LI       +++ A+
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAA 317

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             L+ M   G VPD + Y M++GG C+ G +  A+ + DEM   GC PDV+TYNT+L  +
Sbjct: 318 AYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGL 377

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +   A     +   +G  P L T+T LI   C+     +A+++ D +  +   PD+
Sbjct: 378 CKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDV 437

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V YNSL++  C++G    A  + +++ +R + PN +TY+ L+ S   +G  +     LD 
Sbjct: 438 VAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDE 497

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M    + P + TYN +I G C+ G V +      +M+  N  PD++T+NT++    KE  
Sbjct: 498 MVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEEN 557

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ A  + +++      P  +TYN +I+G +++G ME+A  ++ +M  +GI PD  T+ +
Sbjct: 558 MHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGASGIEPDRYTYMS 617

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           LI G   A   +EA  L  E+  RG
Sbjct: 618 LINGHVTAGNSKEAFQLHDEMMHRG 642



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 110/377 (29%), Positives = 190/377 (50%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
            +KA  V+  M      PD +T+N+++    + G + +AIAL+D M+  G +P ++T+N+
Sbjct: 173 FDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANKGLKPGIVTFNS 232

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           +L+ +  + +F +A   ++   +    P + ++ ILI   C+   +  A++   +M   G
Sbjct: 233 VLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEVEEAMKFYKEMQQRG 292

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
            +PD+V+++ L+     +GK D A   +  +   G+ P+ + Y  ++      G      
Sbjct: 293 VTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEAL 352

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++ D M      P V TYN L+NGLCK   +  A    N+M  +   PD+ T+ T++   
Sbjct: 353 RVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGY 412

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C++G   +ALQL   L      P ++ YN+LIDG+ +KG + KA  L+  M    I P+ 
Sbjct: 413 CRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNH 472

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+  LI   C   QVEEA   L E+  +GN      Y  +I G C+S  V    Q L+ 
Sbjct: 473 VTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQK 532

Query: 528 MISSRYKPDDTVFSTIV 544
           M+     PD   F+T++
Sbjct: 533 MMQDNILPDLITFNTLI 549



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 229/450 (50%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T N ++ ++C   +   A  +I  M +R   PD      LI    R   ++ A  
Sbjct: 154 EVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIA 213

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  M   G  P  +T+N ++ GLCK  +   A  +   M      PDV ++N ++    
Sbjct: 214 LVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFC 273

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+ ++A+ F+K+  ++G  P +++++ LI     +  +  A   L +M   G  PD V
Sbjct: 274 RVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGV 333

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y  ++   C+ G   +A+ V + ++  G  P+ +TYNTLL+ L  +      +++L+ M
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEM 393

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E   +P + T+  LI+G C+ G  ++A+  F+ ++ +  +PD+V YN+++  +C++G L
Sbjct: 394 KERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDL 453

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +A +L   ++     P  +TY+ LID   +KG +E+A     +M+  G  P+ +T+ ++
Sbjct: 454 AKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVSKGNLPNIMTYNSI 513

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G+CR+  V++    L+++ +         +  +IHG  K + +  A  V  +M     
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMMQDNILPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +PD   ++ I+   ++ G  EEA ++++K+
Sbjct: 574 QPDAVTYNMIINGFSEQGNMEEAGRVFKKM 603



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 107/395 (27%), Positives = 197/395 (49%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A +  ++++ S    +  T N+MV   CK  +   A  ++ EM      PDV+T+N ++ 
Sbjct: 141 AEEAYRLVLSSDSEVNAYTLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLID 200

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
             F  G    AI        KG  P ++T+  +++ +CK     +A EV   M     +P
Sbjct: 201 ARFRAGDVDAAIALVDSMANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAP 260

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+ ++N L+   C+ G+ ++A+     +  RG+ P+ ++++ L+    +RG  D     L
Sbjct: 261 DVRSFNILIGGFCRVGEVEEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYL 320

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M      P    Y ++I G C+ G +  A+   ++MV   C PD+VTYNT+L  LCK+
Sbjct: 321 REMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQ 380

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             L +A +LL+ +     +P L T+ TLI G  + G  EKA+ L+  ++   + PD + +
Sbjct: 381 HRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAY 440

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +LI G CR   + +A +L  ++  R     +  Y ++I   C+  +V+ A   L+ M+S
Sbjct: 441 NSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEKGQVEEAFGFLDEMVS 500

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               P+   +++I+K     G  ++  +  QK+++
Sbjct: 501 KGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQ 535



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 82/316 (25%), Positives = 168/316 (53%)

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T  I++   CK     +A  V+ +M      PD+VT+N L++   + G  D A+ +++++
Sbjct: 159 TLNIMVHSYCKSLEFDKADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSM 218

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
            ++G++P  +T+N++L  L     +D   ++   M++ S +P V ++NILI G C+ G V
Sbjct: 219 ANKGLKPGIVTFNSVLKGLCKHRRFDKAKEVFRAMDQCSVAPDVRSFNILIGGFCRVGEV 278

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + A+  + +M  +   PD+V+++ ++G     G ++ A   L  + G    P  + Y  +
Sbjct: 279 EEAMKFYKEMQQRGVTPDVVSFSCLIGLFSTRGKMDHAAAYLREMKGLGLVPDGVIYTMV 338

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I G  + G M +A+ +  +M+  G  PD +T+ TL+ G C+  ++ +A +LL E+ +RG 
Sbjct: 339 IGGFCRAGSMSEALRVRDEMVGLGCLPDVVTYNTLLNGLCKQHRLLDAEELLNEMKERGV 398

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 +  +IHG C+    + A+Q+ + ++  R +PD   +++++  +   G   +A +
Sbjct: 399 TPDLCTFTTLIHGYCRDGNFEKALQLFDTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANE 458

Query: 559 LWQKLIEWKVFEKGTT 574
           LW  +   ++F    T
Sbjct: 459 LWDDMHAREIFPNHVT 474



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 74/281 (26%), Positives = 139/281 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C + +L DA +L++ M  R   PD      LI G  R    EKA ++ 
Sbjct: 366 DVVTYNTLLNGLCKQHRLLDAEELLNEMKERGVTPDLCTFTTLIHGYCRDGNFEKALQLF 425

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             ++     PD + YN ++ G+C++G +  A  L D+M      P+ +TY+ ++ +  + 
Sbjct: 426 DTLLHQRLRPDVVAYNSLIDGMCRKGDLAKANELWDDMHAREIFPNHVTYSILIDSHCEK 485

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ ++A GF  + + KG  P ++TY  +I+  C+   + +  + L  M  +   PD++T+
Sbjct: 486 GQVEEAFGFLDEMVSKGNLPNIMTYNSIIKGYCRSGNVKKGQQFLQKMMQDNILPDLITF 545

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++   K+     A  V N +    ++P+++TYN +++    +G  +   ++   M  
Sbjct: 546 NTLIHGYIKEENMHGAFNVFNIMEKEMVQPDAVTYNMIINGFSEQGNMEEAGRVFKKMGA 605

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           +   P  +TY  LING    G    A    ++M+ +   PD
Sbjct: 606 SGIEPDRYTYMSLINGHVTAGNSKEAFQLHDEMMHRGFAPD 646


>gi|115482712|ref|NP_001064949.1| Os10g0495200 [Oryza sativa Japonica Group]
 gi|78708847|gb|ABB47822.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639558|dbj|BAF26863.1| Os10g0495200 [Oryza sativa Japonica Group]
          Length = 782

 Score =  227 bits (579), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 143/518 (27%), Positives = 251/518 (48%), Gaps = 42/518 (8%)

Query: 84  VLAVNKKLRGLTITKKSHDP-----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           V + N  L+GL    +S +       +    G     D  + N +L  F   G    A  
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYS 222

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
               M  R  +PD     ++I  L +   ++KA +VL  MV +G +PD +TYN ++ G C
Sbjct: 223 TYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYC 282

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
             GQ + AI  L +M   G EP+V+TY++++  +  NG+  +A   +    ++G  P + 
Sbjct: 283 SSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIA 342

Query: 259 TY-----------------------------------TILIEQVCKQCGIARAIEVLDDM 283
           TY                                    ILI    KQ  + +A+ V   M
Sbjct: 343 TYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKM 402

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G +P++V Y ++++  CK G  DDA+L    ++  G+ PN I Y +L+H L +   W
Sbjct: 403 RQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKW 462

Query: 344 DAVDK-ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           D  ++ IL++++      T+F +N +I+  CK G V  +   F+ MV    +PDI+TYNT
Sbjct: 463 DKAEELILEMLDRGICLNTIF-FNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNT 521

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C  G ++EA +LL  +      P ++TY TLI+G  +   M+ A+ L+ +M+ +G
Sbjct: 522 LIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSG 581

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +SP+ IT+  ++ G     +   A +L   I K G ++  S Y +++HGLCK+   D A+
Sbjct: 582 VSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEAL 641

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           ++ + +  +  + +   F+ ++  +   G  +EA  L+
Sbjct: 642 RMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLF 679



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/460 (28%), Positives = 228/460 (49%), Gaps = 10/460 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ----IPDFHFCINLIRGLIRIDRIEKA 171
           D  T   +L+  C+  + +DA   +DI+ RR      IPD     NL++GL   +R ++A
Sbjct: 126 DAITFTPLLKGLCADKRTSDA---MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEA 182

Query: 172 SKVLQIMV---MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            ++L +M      G  PD ++YN ++ G  K G    A +   EM   G  PDV+TY++I
Sbjct: 183 LELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGDSDKAYSTYHEMLDRGILPDVVTYSSI 242

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +       +A+      ++ G  P  +TY  ++   C       AI  L  M  +G 
Sbjct: 243 IAALCKAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGV 302

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P++VTY+SL+N+ CK G+  +A  + +++  RG+EP+  TY TLL    ++G    +  
Sbjct: 303 EPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGALVEMHA 362

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +LD+M      P    +NILI    K   VD+A+  F++M      P++V Y TV+  LC
Sbjct: 363 LLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGTVIDVLC 422

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G +++A+     +     +P +I Y +LI GL      +KA  L  +M++ GI  + I
Sbjct: 423 KSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRGICLNTI 482

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
              ++I   C+  +V E+  L   + + G K     Y  +I G C + K+D A ++L  M
Sbjct: 483 FFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASM 542

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +S   KPD   + T++         ++A  L+++++   V
Sbjct: 543 VSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGV 582



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 208/419 (49%), Gaps = 12/419 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + D + RR +    +    L R L  + R   A+ V +   M  +G     P   T
Sbjct: 38  DARHVFDELLRRGRGASIY---GLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHT 94

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C+ G++    A L  +   G   D IT+  +L+ +  + +   A+     ++
Sbjct: 95  YAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRM 154

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE---GCSPDIVTYNSLVNFSCKQ 305
            + GC P + +Y  L++ +C +     A+E+L  MA +   G  PD+V+YN+++N   K+
Sbjct: 155 TELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKE 214

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G  D A    + +L RG+ P+ +TY++++ +L      D   ++L+ M +    P   TY
Sbjct: 215 GDSDKAYSTYHEMLDRGILPDVVTYSSIIAALCKAQAMDKAMEVLNTMVKNGVMPDCMTY 274

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N +++G C  G    AI +  +M S   +P++VTY++++  LCK G   EA ++   +  
Sbjct: 275 NSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTK 334

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P + TY TL+ G A KG + +   L   M+ NGI PD      LI  + + ++V++
Sbjct: 335 RGLEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQ 394

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           A+ +  ++ + G       Y  VI  LCKS  VD A+   E MI     P+  V+++++
Sbjct: 395 AMLVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLI 453



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 211/444 (47%), Gaps = 2/444 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE +  T + ++   C  G+ T+A K+ D M +R   PD      L++G      
Sbjct: 299 SDG--VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGYATKGA 356

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  PD   +N+++    K+ ++  A+ +  +M   G  P+V+ Y T
Sbjct: 357 LVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAMLVFSKMRQHGLNPNVVCYGT 416

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G    A+ +++  + +G  P +I YT LI  +C      +A E++ +M   G
Sbjct: 417 VIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGLCTCDKWDKAEELILEMLDRG 476

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              + + +NS+++  CK+G+  ++  + + ++  G++P+ ITYNTL+      G  D   
Sbjct: 477 ICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 536

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P + TY  LING C+   +D A+  F +MVS    P+I+TYN +L  L
Sbjct: 537 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 596

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
                   A +L   +  S     L TYN ++ GL K    ++A+ ++  +    +  + 
Sbjct: 597 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 656

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  +++EA DL       G       Y L+   L +   ++    +   
Sbjct: 657 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLS 716

Query: 528 MISSRYKPDDTVFSTIVKKVADDG 551
           M  +    D  + ++IV+K+   G
Sbjct: 717 MEENGCSADSRMLNSIVRKLLQRG 740



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 173/409 (42%), Gaps = 70/409 (17%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T   +LQ + ++G L +   L+D+M R    PD H    LI    + +++++A 
Sbjct: 337 LEPDIATYRTLLQGYATKGALVEMHALLDLMVRNGIQPDHHVFNILICAYAKQEKVDQAM 396

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI---- 228
            V   M   G  P+ + Y  ++  LCK G +  A+   ++M   G  P++I Y ++    
Sbjct: 397 LVFSKMRQHGLNPNVVCYGTVIDVLCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHGL 456

Query: 229 ----------------------LRTMFDN---------GKFKQAIGFWKDQLRKGCPPYL 257
                                 L T+F N         G+  ++   +   +R G  P +
Sbjct: 457 CTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDI 516

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           ITY  LI+  C    +  A ++L  M   G  PDIVTY +L+N  C+  + DDA+ +   
Sbjct: 517 ITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKE 576

Query: 318 LLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIM---------------------NE 355
           ++S G+ PN ITYN +L  L  +R    A +  + I                      N 
Sbjct: 577 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNL 636

Query: 356 ASHSPTVF-------------TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
              +  +F             T+NI+I  L K G +D A + F    +    PD+ TY+ 
Sbjct: 637 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSL 696

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
           +   L ++G L E   L   +  + CS      N+++  L ++G + +A
Sbjct: 697 MAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 745



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 74/302 (24%), Positives = 140/302 (46%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C+  K   A +LI  M  R    +  F  ++I    +  R+ ++ K+  +MV  G
Sbjct: 452 LIHGLCTCDKWDKAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIG 511

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD ITYN ++ G C  G++  A  LL  M   G +PD++TY T++       +   A+
Sbjct: 512 VKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDAL 571

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +K+ +  G  P +ITY I+++ +      A A E+   +   G   ++ TYN +++  
Sbjct: 572 ALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGL 631

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK    D+A+ +  NL    ++  + T+N ++ +L   G  D    +    +     P V
Sbjct: 632 CKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDV 691

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+++   L + G ++   + F  M    C  D    N+++  L + G +  A   L +
Sbjct: 692 RTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFM 751

Query: 423 LN 424
           ++
Sbjct: 752 ID 753



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 70/284 (24%), Positives = 123/284 (43%), Gaps = 35/284 (12%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ + C  G++ ++ KL D+M R    PD      LI G     ++++A+K+L  MV 
Sbjct: 485 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVS 544

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TY  ++ G C+  ++  A+AL  EM  SG  P++ITYN IL+ +F   +   
Sbjct: 545 VGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAA 604

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCK------------------------------- 269
           A   +    + G    L TY I++  +CK                               
Sbjct: 605 AKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIG 664

Query: 270 ---QCG-IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
              +CG +  A ++    +  G  PD+ TY+ +     +QG  ++   +  ++   G   
Sbjct: 665 ALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSA 724

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +S   N+++  L  RG        L +++E   S    T + L+
Sbjct: 725 DSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 768


>gi|224115398|ref|XP_002317023.1| predicted protein [Populus trichocarpa]
 gi|222860088|gb|EEE97635.1| predicted protein [Populus trichocarpa]
          Length = 455

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/442 (28%), Positives = 233/442 (52%), Gaps = 1/442 (0%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           +  A++++++M     IPD      L+  L +   I  A ++++ M  +G   +T+TYN 
Sbjct: 1   MKKATRVMEMMIESGIIPDAASYTFLVNNLCKRGNIGHAMQLVEKMEENGYPTNTVTYNS 60

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           +V GLC  G +  ++ LLD++   G  P+  TY+ +L   +      +A+    + + KG
Sbjct: 61  LVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEIIAKG 120

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P L++Y +L+  +CK+     AI    D+  +G +P++V+YN ++   C +G++++A 
Sbjct: 121 WQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRWEEAN 180

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            ++  + S    P+ +TYN L+ SL   G  +   ++LD M  AS  P+  TYN +I  L
Sbjct: 181 QLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPIIAHL 240

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G +D  I   +QM+   C P+  T+N +   LCK+G + EA  ++  L     S   
Sbjct: 241 CKEGKLDLVIKCLDQMIHHRCNPNEGTFNAI-AVLCKQGRVPEAFSIIQNLGNKQRSSTH 299

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
             Y  +I  L +KG    A  L  +M + G  PD  T+ +LI G C    ++EA+++ + 
Sbjct: 300 DFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALEIFRL 359

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + +   +     +  +I G CKS + D+++ +LE+M+   Y P++T ++ IV+ +A +  
Sbjct: 360 LEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIAHEEE 419

Query: 553 TEEAYKLWQKLIEWKVFEKGTT 574
            E A ++ ++L+  +V  + T 
Sbjct: 420 KELAAEVLKELLLRQVMRRNTA 441



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/392 (28%), Positives = 196/392 (50%), Gaps = 1/392 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C  G L  + +L+D +  +  +P+      L+    +   + +A K+L  +
Sbjct: 57  TYNSLVRGLCMHGNLNQSLQLLDKLMWKGLVPNEFTYSFLLEAAYKERGVNEAMKLLDEI 116

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+ ++YN+++ GLCK G+   AI    ++   G  P+V++YN ILR++   G++
Sbjct: 117 IAKGWQPNLVSYNVLLTGLCKEGRTEEAIRFFRDLPSKGFNPNVVSYNIILRSLCHEGRW 176

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A     +   +   P L+TY ILI  +     I  A EVLD+M      P   TYN +
Sbjct: 177 EEANQLLAEMDSEERSPSLVTYNILIGSLAFHGRIEHAFEVLDEMVRASFKPSATTYNPI 236

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK+GK D  +  ++ ++     PN  T+N +   L  +G       I+  +     
Sbjct: 237 IAHLCKEGKLDLVIKCLDQMIHHRCNPNEGTFNAI-AVLCKQGRVPEAFSIIQNLGNKQR 295

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S T   Y  +I  LC+ G    A     +M      PD  TY++++  LC EGML+EAL+
Sbjct: 296 SSTHDFYKGVITSLCRKGNTYPAFQLLYEMTKFGFVPDPYTYSSLIRGLCIEGMLDEALE 355

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +  LL  +   P L  +N LI G  K G  + ++ +   M+E G +P++ T+  ++ G  
Sbjct: 356 IFRLLEENDYRPILDNFNALILGFCKSGRTDLSLDILEMMVEKGYTPNETTYTIIVEGIA 415

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
             ++ E A ++LKE+  R    RN+A RLV+ 
Sbjct: 416 HEEEKELAAEVLKELLLRQVMRRNTAERLVLQ 447


>gi|224078588|ref|XP_002305565.1| predicted protein [Populus trichocarpa]
 gi|222848529|gb|EEE86076.1| predicted protein [Populus trichocarpa]
          Length = 757

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 228/425 (53%), Gaps = 1/425 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T N ++      G +  A +++D+M R    PD +   +LI GL ++  +++A KVL
Sbjct: 300 DKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVL 359

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+     P+T+TYN ++  LCK  Q+  A  L   ++  G  PDV TYN++++ +  +
Sbjct: 360 NQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLS 419

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A+  +K+   KGC P   TY +LI+ +C +  +  A+ +L +M + GC+ +++TY
Sbjct: 420 RNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITY 479

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK  +  +A  + + +  +G+  NS+TYNTL+  L      +   +++D M  
Sbjct: 480 NTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIM 539

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P  FTYN L+   CK G + +A +    M S  C+PDIVTY T++  LCK G +  
Sbjct: 540 EGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEA 599

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +LL  +     +     YN +I  L ++   ++A+ L+ +M+E   +PD +T++ +  
Sbjct: 600 ATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFR 659

Query: 476 GFCR-ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
           G C+    + EAVD + E+ +RG     S++ ++  GL     V   I+++++++     
Sbjct: 660 GLCQGGGPIGEAVDFVMEMLERGYVPEFSSFYMLAEGLFSLAMVGTLIKLIDMVMEKAKF 719

Query: 535 PDDTV 539
            D+ V
Sbjct: 720 SDNEV 724



 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 218/437 (49%), Gaps = 1/437 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DEKT   I+Q F   G L  A ++ + M     +        L+ G  +  RIE+A + +
Sbjct: 229 DEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFI 288

Query: 176 QIMVM-SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           + M +  G  PD  T+NM+V GL K G ++ A+ ++D M   G +PD+ TYN+++  +  
Sbjct: 289 EEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCK 348

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+  +A+      + + C P  +TY  +I  +CK+  +  A ++   +  +G  PD+ T
Sbjct: 349 LGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCT 408

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YNSL+   C    +  A+ +   + ++G  P+  TYN L+ SL  RG       +L  M 
Sbjct: 409 YNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFRGKLQEALNLLKEME 468

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            +  +  V TYN LI+G CK   +  A   F+QM  +    + VTYNT++  LCK   + 
Sbjct: 469 VSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVE 528

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA QL+  +      P   TYN+L+    K G ++KA  +   M  +G  PD +T+ TLI
Sbjct: 529 EASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLI 588

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+A +VE A  LL+ I  +G  +   AY  VI  L + K+   A+++   MI     
Sbjct: 589 AGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIEKAEA 648

Query: 535 PDDTVFSTIVKKVADDG 551
           PD   +  + + +   G
Sbjct: 649 PDAVTYKIVFRGLCQGG 665



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 136/455 (29%), Positives = 244/455 (53%), Gaps = 3/455 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N +++  C   ++  A  L++ M     +PD      +++G I    ++ A 
Sbjct: 191 IRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAM 250

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV-SGCEPDVITYNTILRT 231
           +V + MV +G V   +T N++V G CK G+I  A+  ++EMS+  G  PD  T+N ++  
Sbjct: 251 RVKEQMVEAGCVVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNG 310

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   G  K A+      LR+G  P + TY  LI  +CK   +  A++VL+ M    CSP+
Sbjct: 311 LSKTGHVKHALEVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPN 370

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG-SRGCWDAVDKIL 350
            VTYN++++  CK+ + ++A  +   L  +G+ P+  TYN+L+  L  SR    A++   
Sbjct: 371 TVTYNTIISTLCKENQVEEATKLALVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYK 430

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           ++  +  H P  FTYN+LI+ LC  G +  A+N   +M    C  +++TYNT++   CK 
Sbjct: 431 EMKTKGCH-PDEFTYNMLIDSLCFRGKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKN 489

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             + EA ++   +     S   +TYNTLIDGL K   +E+A  L  QM+  G+ PD  T+
Sbjct: 490 KRIAEAEEIFDQMELQGVSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTY 549

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +L+  FC+A  +++A D+++ +   G +     Y  +I GLCK+ +V+ A ++L  +  
Sbjct: 550 NSLLTYFCKAGDIKKAADIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQM 609

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                    ++ +++ +     ++EA +L++++IE
Sbjct: 610 KGINLTPHAYNPVIQALFRRKRSKEAVRLFREMIE 644



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 215/444 (48%), Gaps = 37/444 (8%)

Query: 123 ILQNFCSRGKLTDASKLIDIM-ARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
            ++++ S G   +  + +D M      + + HF   L+  L+  ++++        MV  
Sbjct: 130 FIESYASFGLYNEILQFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIAHSNMVSR 189

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD  T+N+++  LC+  QIR AI L++EM   G  PD  T+ TI++   + G     
Sbjct: 190 GIRPDVSTFNILIKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEG----- 244

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
                                          +  A+ V + M   GC    VT N LVN 
Sbjct: 245 ------------------------------NLDGAMRVKEQMVEAGCVVTNVTVNVLVNG 274

Query: 302 SCKQGKYDDAVLVINNL-LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
            CK+G+ ++A+  I  + L  G  P+  T+N L++ L   G      +++D+M      P
Sbjct: 275 FCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHALEVMDMMLREGFDP 334

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            ++TYN LI+GLCK G VD A+   NQM+ ++C P+ VTYNT++  LCKE  + EA +L 
Sbjct: 335 DIYTYNSLISGLCKLGEVDEAVKVLNQMIERDCSPNTVTYNTIISTLCKENQVEEATKLA 394

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            +L G    P + TYN+LI GL        AM LY +M   G  PD+ T+  LI   C  
Sbjct: 395 LVLTGKGILPDVCTYNSLIQGLCLSRNHTVAMELYKEMKTKGCHPDEFTYNMLIDSLCFR 454

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +++EA++LLKE+   G       Y  +I G CK+K++  A ++ + M       +   +
Sbjct: 455 GKLQEALNLLKEMEVSGCARNVITYNTLIDGFCKNKRIAEAEEIFDQMELQGVSRNSVTY 514

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           +T++  +      EEA +L  ++I
Sbjct: 515 NTLIDGLCKSERVEEASQLMDQMI 538



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 72/283 (25%), Positives = 137/283 (48%), Gaps = 43/283 (15%)

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMN---------------EASHSPTVFT--- 364
            +P+S  +  +LH LG  G +DA+  IL  M                E+  S  ++    
Sbjct: 85  FKPSSSIFKEVLHKLGKAGEFDAMKDILKEMKISLSVIDNDSLLVFIESYASFGLYNEIL 144

Query: 365 ------------------YNILINGLC---KYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
                             YN L+N L    K  LV+ A    + MVS+  +PD+ T+N +
Sbjct: 145 QFVDAMEVEFGVVANTHFYNFLLNVLVDGNKLKLVEIA---HSNMVSRGIRPDVSTFNIL 201

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + ALC+   +  A+ L+  +      P   T+ T++ G  ++G ++ AM +  QM+E G 
Sbjct: 202 IKALCRAHQIRPAILLMEEMEDFGLLPDEKTFTTIMQGFIEEGNLDGAMRVKEQMVEAGC 261

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR-GNKMRNSAYRLVIHGLCKSKKVDMAI 522
              ++T   L+ GFC+  ++EEA+  ++E+  R G       + ++++GL K+  V  A+
Sbjct: 262 VVTNVTVNVLVNGFCKEGRIEEALRFIEEMSLREGFFPDKYTFNMLVNGLSKTGHVKHAL 321

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +V+++M+   + PD   +++++  +   G  +EA K+  ++IE
Sbjct: 322 EVMDMMLREGFDPDIYTYNSLISGLCKLGEVDEAVKVLNQMIE 364



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 49/188 (26%), Positives = 94/188 (50%), Gaps = 1/188 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  +  T N ++   C   ++ +AS+L+D M      PD     +L+    +   I+KA+
Sbjct: 507 VSRNSVTYNTLIDGLCKSERVEEASQLMDQMIMEGLRPDKFTYNSLLTYFCKAGDIKKAA 566

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++Q M   G  PD +TY  ++ GLCK G++ +A  LL  + + G       YN +++ +
Sbjct: 567 DIVQTMASDGCEPDIVTYGTLIAGLCKAGRVEAATKLLRTIQMKGINLTPHAYNPVIQAL 626

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG-IARAIEVLDDMAIEGCSPD 291
           F   + K+A+  +++ + K   P  +TY I+   +C+  G I  A++ + +M   G  P+
Sbjct: 627 FRRKRSKEAVRLFREMIEKAEAPDAVTYKIVFRGLCQGGGPIGEAVDFVMEMLERGYVPE 686

Query: 292 IVTYNSLV 299
             ++  L 
Sbjct: 687 FSSFYMLA 694


>gi|147787958|emb|CAN73849.1| hypothetical protein VITISV_021776 [Vitis vinifera]
          Length = 671

 Score =  227 bits (578), Expect = 1e-56,   Method: Compositional matrix adjust.
 Identities = 134/473 (28%), Positives = 236/473 (49%), Gaps = 25/473 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G  + A +L+  M ++N  P+      +I  L +  ++ +A  + 
Sbjct: 165 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 224

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  PD  TYN ++  LC   + +    LL+EM  S   PDV+++NT++  +   
Sbjct: 225 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 284

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A       +++G  P ++TYT L++  C    +  A++V D M  +GC P++++Y
Sbjct: 285 GKVTEAHDVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISY 344

Query: 296 NSLVNFSCKQGK-------------------YDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           N+L+N  CK  +                    D+AV V + ++ +G  PN I+YNTL++ 
Sbjct: 345 NTLINGYCKIQRIDKAIHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLING 404

Query: 337 LGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
                    +DK + +  E       P   TY+ LI+GLC    +  AI  F++MV+ + 
Sbjct: 405 YCK---IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQ 461

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P++VTY  +L  LCK   L EA+ LL  + GS+  P +   N  IDG+ + G +E A  
Sbjct: 462 IPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARD 521

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L+  +   G+ PD  T+  +I G CR   ++EA  L +E+ + G  +    Y  +  G  
Sbjct: 522 LFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYNTITRGFL 581

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           ++ +   AIQ+L+ M++  +  D +  +  VK ++DDG+ +   ++ +   +W
Sbjct: 582 RNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRNGCKW 634



 Score =  222 bits (566), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 130/465 (27%), Positives = 231/465 (49%), Gaps = 25/465 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQI---PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           NK+L    S  K+   S L+ +  + +     P+ +    LI     ++R+  A  VL  
Sbjct: 65  NKLLT---SIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAK 121

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           ++  G  PDT T+  ++ G+C  G+I  A+ L D+M   G  PDV+TY T++  +   G 
Sbjct: 122 ILKLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGN 181

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              AI      ++K C P +  Y  +I+ +CK   +  A  +  +M  +G SPDI TYNS
Sbjct: 182 TSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNS 241

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C   ++     ++N ++   + P+ +++NT++ +L   G       ++D M +  
Sbjct: 242 LIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRG 301

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TY  L++G C    +D A+  F+ MV K C P++++YNT++   CK   +++A+
Sbjct: 302 VEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAI 361

Query: 418 QLLHLLNG-------------------SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
               L++                      C P +I+YNTLI+G  K   ++KAM L+G+M
Sbjct: 362 HYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEM 421

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
               + PD +T+ TLI G C  +++++A+ L  E+           YR+++  LCK++ +
Sbjct: 422 CRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYL 481

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             A+ +L+ +  S   PD  V +  +  +   G  E A  L+  L
Sbjct: 482 AEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNL 526



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 115/455 (25%), Positives = 213/455 (46%), Gaps = 33/455 (7%)

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV------------PDTIT 189
           IM R +  P     ++L+   + +      SK L    + G +            P T+ 
Sbjct: 4   IMRRPSSRPSGTQMLSLLPHFLSLSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVD 63

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           +N ++  + K     + ++L  +M   G  P++ T + ++ +     +   A       L
Sbjct: 64  FNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKIL 123

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           + G  P   T+T LI  +C +  I  A+ + D M  EG  PD+VTY +L+N  CK G   
Sbjct: 124 KLGHQPDTATFTTLIRGICVEGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTS 183

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            A+ ++ +++ +  +PN   YNT++ SL   R   +A +   +++ +   SP +FTYN L
Sbjct: 184 AAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGI-SPDIFTYNSL 242

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I+ LC            N+MV     PD+V++NTV+ ALCKEG + EA  ++  +     
Sbjct: 243 IHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV----- 483
            P ++TY  L+DG      M++A+ ++  M+  G  P+ I++ TLI G+C+  ++     
Sbjct: 303 EPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAIH 362

Query: 484 --------------EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
                         +EAV +   +  +G      +Y  +I+G CK +++D A+ +   M 
Sbjct: 363 YTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMC 422

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                PD   +ST++  +      ++A  L+ +++
Sbjct: 423 RQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMV 457



 Score =  176 bits (445), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 194/401 (48%), Gaps = 18/401 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N ++   C+  +    + L++ M     +PD      ++  L +  ++ +A 
Sbjct: 232 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAH 291

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V+  M+  G  P+ +TY  ++ G C   ++  A+ + D M   GC P+VI+YNT++   
Sbjct: 292 DVVDKMIQRGVEPNVVTYTALMDGHCLLSEMDEAVKVFDTMVCKGCMPNVISYNTLIN-- 349

Query: 233 FDNGKFKQAIGFWKDQ-LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
                     G+ K Q + K      I YT L++  C    +  A++V D M  +GC P+
Sbjct: 350 ----------GYCKIQRIDKA-----IHYTXLMDXXCCYLNMDEAVKVFDTMVCKGCMPN 394

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +++YN+L+N  CK  + D A+ +   +  + + P+++TY+TL+H L           +  
Sbjct: 395 VISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFH 454

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M   S  P + TY IL++ LCK   +  A+     +   N  PDI   N  +  +C+ G
Sbjct: 455 EMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAG 514

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L  A  L   L+     P + TY+ +I+GL ++G +++A  L+ +M ENG + +   + 
Sbjct: 515 ELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCIYN 574

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           T+  GF R ++   A+ LL+E+  RG     S   L +  L
Sbjct: 575 TITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKML 615



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/276 (28%), Positives = 131/276 (47%)

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +++N   + S      D A+   N +L     P+++ +N LL S+        +  +   
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+     P ++T +ILIN  C    V  A +   +++    QPD  T+ T++  +C EG 
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRVGFAFSVLAKILKLGHQPDTATFTTLIRGICVEGK 146

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EAL L   + G    P ++TY TLI+GL K G    A+ L G M++    P+   + T
Sbjct: 147 IGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNT 206

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I   C+  QV EA +L  E+  +G       Y  +IH LC   +      +L  M+ S+
Sbjct: 207 IIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSK 266

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             PD   F+T+V  +  +G   EA+ +  K+I+  V
Sbjct: 267 IMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGV 302



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 41/149 (27%), Positives = 68/149 (45%), Gaps = 4/149 (2%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L + +G  ++ D + NN  +   C  G+L  A  L   ++ +   PD      +I GL R
Sbjct: 488 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 547

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
              +++ASK+ + M  +G   +   YN +  G  +  +   AI LL EM   G   D  T
Sbjct: 548 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 607

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
               ++ + D+G   Q++   K  LR GC
Sbjct: 608 MTLFVKMLSDDG-LDQSL---KQILRNGC 632


>gi|224092332|ref|XP_002309562.1| predicted protein [Populus trichocarpa]
 gi|222855538|gb|EEE93085.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 133/431 (30%), Positives = 205/431 (47%), Gaps = 35/431 (8%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD +    LI     + R++ A  V   M+  G  PD +T+N ++ GLCK G+   A+  
Sbjct: 128 PDIYTLSILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEF 187

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
            D+   SGC+P V TY TI+  +   G+   A G +K     GC P ++TY ILI+ +CK
Sbjct: 188 FDDFEASGCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCK 247

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLV----NFS----------------------- 302
              +  A+++   M  +  SPDI TYNSL+    NF                        
Sbjct: 248 DKLVNEALDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFT 307

Query: 303 --------CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
                   CK+GK  +A  V   +   G+EP+ +TY++L++    R       K+ D M 
Sbjct: 308 FNVLVDAICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMI 367

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P  F+YNILI G CK   +D A   FN+M+ +   PD V YNT++  LC+ G L 
Sbjct: 368 TKGCKPDAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLR 427

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA  L   ++ +   P L TY+ L+DG  K+G + KA  L+  M    + PD   +  LI
Sbjct: 428 EAQDLFKNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILI 487

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              C+   +++A  L  E+  +G       Y  +I+ LCK   +D A++    M      
Sbjct: 488 DAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCP 547

Query: 535 PDDTVFSTIVK 545
           PD+  ++ I++
Sbjct: 548 PDEFSYNVIIR 558



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 222/433 (51%), Gaps = 1/433 (0%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL-QIMVMSGGVPDTITYN 191
           + DA    + M  R  +P       L+  ++++ +   A   L + M ++G  PD  T +
Sbjct: 75  IDDALASFNHMLHREPLPCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLS 134

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           +++       ++  A ++  +M   G +PD +T+NT++  +   GKF QA+ F+ D    
Sbjct: 135 ILIDCFSHLQRVDLAFSVFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEAS 194

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           GC P + TYT +I  +CK      A  +   M   GC P++VTYN L++  CK    ++A
Sbjct: 195 GCQPTVYTYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEA 254

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + + + + ++ + P+  TYN+L+  L +   W     +L+ M   +  P +FT+N+L++ 
Sbjct: 255 LDIFSYMKAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDA 314

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           +CK G V  A   F  M     +PD+VTY++++        + EA +L   +    C P 
Sbjct: 315 ICKEGKVSEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPD 374

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
             +YN LI G  K   +++A  L+ +M+  G++PD++ + TLI G C+  ++ EA DL K
Sbjct: 375 AFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFK 434

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            +   GN      Y +++ G CK   +  A ++  +M S+  KPD  +++ ++  +   G
Sbjct: 435 NMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFG 494

Query: 552 MTEEAYKLWQKLI 564
             ++A KL+ +L 
Sbjct: 495 NLKDARKLFSELF 507



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 113/379 (29%), Positives = 189/379 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I+   C  G+ T A+ L   M      P+      LI  L +   + +A  +   M
Sbjct: 202 TYTTIINGLCKIGETTAAAGLFKKMEEAGCQPNVVTYNILIDSLCKDKLVNEALDIFSYM 261

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 PD  TYN ++ GLC   + + A ALL+EM+     P++ T+N ++  +   GK 
Sbjct: 262 KAKRISPDIFTYNSLIQGLCNFRRWKEASALLNEMTSLNIMPNIFTFNVLVDAICKEGKV 321

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A G +K     G  P ++TY+ L+     +  I  A ++ D M  +GC PD  +YN L
Sbjct: 322 SEAQGVFKTMTEMGVEPDVVTYSSLMYGYSLRMEIVEARKLFDAMITKGCKPDAFSYNIL 381

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK  + D+A  + N ++ +G+ P+++ YNTL+H L   G       +   M+   +
Sbjct: 382 IKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLFKNMHSNGN 441

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +FTY++L++G CK G + +A   F  M S   +PDI  YN ++ A+CK G L +A +
Sbjct: 442 LPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKFGNLKDARK 501

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   L      P +  Y T+I+ L K+G +++A+  +  M  +G  PD+ ++  +I GF 
Sbjct: 502 LFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSYNVIIRGFL 561

Query: 479 RADQVEEAVDLLKEIGKRG 497
           +      A  L+ E+  RG
Sbjct: 562 QYKDESRAAQLIGEMRDRG 580



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 101/208 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N +++ +C   ++ +A +L + M  +   PD      LI GL ++ R+ +A  + 
Sbjct: 374 DAFSYNILIKGYCKAKRIDEAKQLFNEMIHQGLTPDNVNYNTLIHGLCQLGRLREAQDLF 433

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +G +PD  TY+M++ G CK G +  A  L   M  +  +PD+  YN ++  M   
Sbjct: 434 KNMHSNGNLPDLFTYSMLLDGFCKEGYLGKAFRLFRVMQSTYLKPDIAMYNILIDAMCKF 493

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  K A   + +   +G  P +  YT +I  +CK+  +  A+E   +M  +GC PD  +Y
Sbjct: 494 GNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEALEAFRNMEGDGCPPDEFSY 553

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           N ++    +      A  +I  +  RG 
Sbjct: 554 NVIIRGFLQYKDESRAAQLIGEMRDRGF 581



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 67/137 (48%), Gaps = 1/137 (0%)

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NGISPDDITHRTLIWGFCRADQVEEAVD 488
           PC+I +  L+  + K G    A++   + ME  G+SPD  T   LI  F    +V+ A  
Sbjct: 92  PCIIQFTKLLSAIVKMGQYYGAVISLSKQMELAGLSPDIYTLSILIDCFSHLQRVDLAFS 151

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           +  ++ K G +     +  +I+GLCK  K   A++  +   +S  +P    ++TI+  + 
Sbjct: 152 VFSKMIKLGLQPDAVTFNTLINGLCKVGKFAQAVEFFDDFEASGCQPTVYTYTTIINGLC 211

Query: 549 DDGMTEEAYKLWQKLIE 565
             G T  A  L++K+ E
Sbjct: 212 KIGETTAAAGLFKKMEE 228



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 25/106 (23%), Positives = 47/106 (44%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           +++ D    N ++   C  G L DA KL   +  +  +P+      +I  L +   +++A
Sbjct: 475 YLKPDIAMYNILIDAMCKFGNLKDARKLFSELFVQGLLPNVQIYTTIINNLCKEGLLDEA 534

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
            +  + M   G  PD  +YN+++ G  +      A  L+ EM   G
Sbjct: 535 LEAFRNMEGDGCPPDEFSYNVIIRGFLQYKDESRAAQLIGEMRDRG 580


>gi|358346916|ref|XP_003637510.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503445|gb|AES84648.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 718

 Score =  227 bits (578), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 233/428 (54%), Gaps = 4/428 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD +F    +  L+  ++++    +   MV  G V D  T+N+++  LCK  Q+R AI +
Sbjct: 121 PDTNFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILM 180

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L+EM+  G +PD IT+ T+++   + G    A+   K  L  GC    ++  +L+   CK
Sbjct: 181 LEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCK 240

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
           +  +  A+  + +++ EG SPD VT+NSLVN  C+ G  +DA+ +++ ++ +G +P+  T
Sbjct: 241 EGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYT 300

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YN+L+  +   G ++   +IL  M     SP   TYN LI+ LCK   ++ A +    +V
Sbjct: 301 YNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV 360

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           SK   PD+ T+NT++  LC     + A+++   +    C P   TY+ LID L  +  ++
Sbjct: 361 SKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLK 420

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A++L  +M  +G + + + + TLI G C++ ++E+A ++  ++   G    +  Y  +I
Sbjct: 421 EALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLI 480

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI----E 565
            GLCK+K+V+ A Q+++ MI    KPD   +++++      G  E+A  + Q +     E
Sbjct: 481 DGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCE 540

Query: 566 WKVFEKGT 573
             +F  GT
Sbjct: 541 PDIFTYGT 548



 Score =  225 bits (573), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 123/415 (29%), Positives = 220/415 (53%), Gaps = 1/415 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T N ++  FC  G + DA  ++D M  +   PD +   +LI G+ ++   EKA ++L
Sbjct: 262 DQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEIL 321

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M++    P+T+TYN ++  LCK  +I +A  L   +   G  PDV T+NT+++ +  +
Sbjct: 322 QQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLS 381

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A+  +++   KGC P   TY+ILI+ +C +  +  A+ +L +M   GC+ + V Y
Sbjct: 382 KNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVY 441

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK  + +DA  + + +   G+  +S+TYNTL+  L      +   +++D M  
Sbjct: 442 NTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIM 501

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P  FTYN L+   C+ G +++A +    M S  C+PDI TY T++G LC+ G ++ 
Sbjct: 502 EGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDV 561

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +LL  +           YN +I  L  +   ++ M L+ +MME    PD +TH+ +  
Sbjct: 562 ASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPPDALTHKIVFR 621

Query: 476 GFCRAD-QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           G C     ++EA+D   E+ ++G      ++  +  GLC     D  I+++ +++
Sbjct: 622 GLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGFLAEGLCSLSMEDTLIELINMVM 676



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 130/450 (28%), Positives = 231/450 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +++  C   +L  A  +++ MA     PD      L++G I    +  A K+ 
Sbjct: 157 DVSTFNVLIKALCKAHQLRPAILMLEEMANHGLKPDEITFTTLMQGFIEEGDLNGALKMK 216

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G +   ++  ++V G CK G++  A+  + E+S  G  PD +T+N+++      
Sbjct: 217 KQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRI 276

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A+      + KG  P + TY  LI  +CK     +AIE+L  M +  CSP+ VTY
Sbjct: 277 GNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKLGEFEKAIEILQQMILRECSPNTVTY 336

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK+ + + A  +   L+S+G+ P+  T+NTL+  L      D   ++ + M  
Sbjct: 337 NTLISALCKENEIEAATDLARILVSKGLLPDVCTFNTLIQGLCLSKNQDIAMEMFEEMKN 396

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P  FTY+ILI+ LC    +  A+    +M S  C  + V YNT++  LCK   + +
Sbjct: 397 KGCKPDEFTYSILIDSLCYERRLKEALMLLKEMESSGCARNAVVYNTLIDGLCKSRRIED 456

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A ++   +     S   +TYNTLIDGL K   +E+A  L  QM+  G+ PD  T+ +L+ 
Sbjct: 457 AEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLT 516

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            FCR   +E+A D+++ +   G +     Y  +I GLC++ +VD+A ++L  +       
Sbjct: 517 YFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVL 576

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               ++ +++ +     T+E  +L+++++E
Sbjct: 577 TPHAYNPVIQALFMRKRTKEGMRLFREMME 606



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 218/455 (47%), Gaps = 1/455 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T   ++Q F   G L  A K+   M     +        L+ G  +  R+E+A + +
Sbjct: 192 DEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGRVEEALRFV 251

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +   G  PD +T+N +V G C+ G +  A+ ++D M   G +PDV TYN+++  M   
Sbjct: 252 LEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNSLISGMCKL 311

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+F++AI   +  + + C P  +TY  LI  +CK+  I  A ++   +  +G  PD+ T+
Sbjct: 312 GEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILVSKGLLPDVCTF 371

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+   C     D A+ +   + ++G +P+  TY+ L+ SL           +L  M  
Sbjct: 372 NTLIQGLCLSKNQDIAMEMFEEMKNKGCKPDEFTYSILIDSLCYERRLKEALMLLKEMES 431

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +  +     YN LI+GLCK   ++ A   F+QM         VTYNT++  LCK   + E
Sbjct: 432 SGCARNAVVYNTLIDGLCKSRRIEDAEEIFDQMELLGVSRSSVTYNTLIDGLCKNKRVEE 491

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A QL+  +      P   TYN+L+    + G +EKA  +   M  NG  PD  T+ TLI 
Sbjct: 492 ASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTMASNGCEPDIFTYGTLIG 551

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G CRA +V+ A  LL+ +  +G  +   AY  VI  L   K+    +++   M+     P
Sbjct: 552 GLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRTKEGMRLFREMMEKSDPP 611

Query: 536 DDTVFSTIVKKVAD-DGMTEEAYKLWQKLIEWKVF 569
           D      + + + +  G  +EA     +++E  + 
Sbjct: 612 DALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGIL 646



 Score =  115 bits (289), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 138/297 (46%), Gaps = 39/297 (13%)

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM-NEASHSP-- 360
           +   +D    ++  L S G  PN+ T+ TL+ S  +   +  ++ +L I+ NE    P  
Sbjct: 67  QSSSFDSITTLLKQLKSSGSIPNATTFATLIQSFTN---FHEIENLLKILENELGFKPDT 123

Query: 361 ---------------------------------TVFTYNILINGLCKYGLVDRAINSFNQ 387
                                             V T+N+LI  LCK   +  AI    +
Sbjct: 124 NFYNIALNALVEDNKLKLVEMLHSKMVNEGIVLDVSTFNVLIKALCKAHQLRPAILMLEE 183

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M +   +PD +T+ T++    +EG LN AL++   + G  C    ++   L++G  K+G 
Sbjct: 184 MANHGLKPDEITFTTLMQGFIEEGDLNGALKMKKQMLGYGCLLTNVSVKVLVNGFCKEGR 243

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +E+A+    ++ E G SPD +T  +L+ GFCR   V +A+D++  + ++G       Y  
Sbjct: 244 VEEALRFVLEVSEEGFSPDQVTFNSLVNGFCRIGNVNDALDIVDFMIEKGFDPDVYTYNS 303

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +I G+CK  + + AI++L+ MI     P+   ++T++  +  +   E A  L + L+
Sbjct: 304 LISGMCKLGEFEKAIEILQQMILRECSPNTVTYNTLISALCKENEIEAATDLARILV 360



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 54/205 (26%), Positives = 100/205 (48%), Gaps = 1/205 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   ++ +AS+L+D M      PD     +L+    R+  IEKA  ++Q M
Sbjct: 475 TYNTLIDGLCKNKRVEEASQLMDQMIMEGLKPDKFTYNSLLTYFCRVGDIEKAGDIVQTM 534

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  PD  TY  ++GGLC+ G++  A  LL  + + G       YN +++ +F   + 
Sbjct: 535 ASNGCEPDIFTYGTLIGGLCRAGRVDVASKLLRSVQMKGIVLTPHAYNPVIQALFMRKRT 594

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG-IARAIEVLDDMAIEGCSPDIVTYNS 297
           K+ +  +++ + K  PP  +T+ I+   +C   G I  AI+   +M  +G  P+  ++  
Sbjct: 595 KEGMRLFREMMEKSDPPDALTHKIVFRGLCNGGGPIQEAIDFTVEMLEKGILPEFPSFGF 654

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRG 322
           L    C     D  + +IN ++ + 
Sbjct: 655 LAEGLCSLSMEDTLIELINMVMEKA 679


>gi|449508997|ref|XP_004163464.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 239/444 (53%), Gaps = 5/444 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++     + ++++A KL++ M     +PD     ++I GL ++++I  A+K++  M++ G
Sbjct: 259 LIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG 318

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TY  ++ GLC+ G++  A  +L ++      P+    NT++     +G+ K+A 
Sbjct: 319 FYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQ 374

Query: 243 GFWKDQL-RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
            F  + +   G  P + TY IL+  +CK+  ++ A +++++M+  GC P+++TY  LVN 
Sbjct: 375 SFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNG 434

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK G  ++A LV++ + +RG+  NS+ YN L+ +L  +        +L  M      P 
Sbjct: 435 LCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           +FTYN LI GLCK   +D A   F+ M+      + VTYNT++ AL + G   +AL L++
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVN 554

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +    C+   ITYN LI    K G +EK + LY QM+ +G+  D I+   +I G C+  
Sbjct: 555 DMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVG 614

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V+ A + L++   RG       Y  V++GLCK  ++  A+ + + +     +PD   ++
Sbjct: 615 KVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYN 674

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
           T +     +GM  +A   + + IE
Sbjct: 675 TFISWQCKEGMVNDACSFFYRGIE 698



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 228/457 (49%), Gaps = 37/457 (8%)

Query: 141 DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           D++++      F F I +++ L   + ++ A  +L+ M   G VP++I Y  ++  L ++
Sbjct: 208 DMLSKGVSPTVFTFGI-VMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK 266

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
            Q+  A+ LL+EM V GC PDV T+N ++  +    K   A       L +G  P  +TY
Sbjct: 267 NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTY 326

Query: 261 TILIEQVCKQCGIARAIEVL--------------------------------DDMAIEGC 288
             L+  +C+   +  A ++L                                + M   G 
Sbjct: 327 GFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGF 386

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PDI TYN L++  CK+G    A  ++N +  RG EPN ITY  L++ L   G  +    
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGL 446

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M+    +     YN LI  LC+   V  A+N  ++M +K C+PD+ TYN+++  LC
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLC 506

Query: 409 KEGMLNEALQLLH--LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           K   ++EA +L H  LL+G+  +   +TYNTLI  L ++G  +KA+ L   M+  G + D
Sbjct: 507 KVDRIDEAFRLFHNMLLDGAVANN--VTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            IT+  LI  FC+   +E+ ++L +++   G      +  ++I+GLCK  KVD A + L 
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             I+  + PD   +++++  +   G  +EA  L+ +L
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRL 661



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 217/443 (48%), Gaps = 32/443 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +T N ++   C   K+ DA+KL+D M  R   PD      L+ GL RI ++ +A K+L
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL 346

Query: 176 --------------------------------QIMVMSGGVPDTITYNMMVGGLCKRGQI 203
                                           + M+  G  PD  TYN+++ GLCK G +
Sbjct: 347 IKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSL 406

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A  L++EMS  GCEP+VITY  ++  +   G  ++A     +   +G     + Y  L
Sbjct: 407 SFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL 466

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I  +C++  +  A+ +L +M  +GC PD+ TYNSL+   CK  + D+A  + +N+L  G 
Sbjct: 467 ICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA 526

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             N++TYNTL+H+L  RG +     +++ M     +    TYN LI   CK G +++ + 
Sbjct: 527 VANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLE 586

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            + QM+      D ++ N ++  LCK G ++ A + L         P ++TYN++++GL 
Sbjct: 587 LYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLC 646

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G +++A+ L+ ++   G+ PD  T+ T I   C+   V +A        + G    N 
Sbjct: 647 KVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACSFFYRGIENGFVPSNL 706

Query: 504 AYRLVIHGLCKSKKVDMAIQVLE 526
            + ++++ L K    +    VL+
Sbjct: 707 TWNVLVYTLLKQSNQENNFFVLD 729



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 188/409 (45%), Gaps = 33/409 (8%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD- 247
            Y + +  L   G+ +    LL +M   G       +  I++     G+  QAI    D 
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
           +    C P   +Y +++E +        A  V  DM  +G SP + T+  ++   C   +
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D A  ++ ++   G  PNSI Y TL+H+L  +       K+L+ M      P V T+N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL------- 420
           +I+GLCK   +  A    ++M+ +   PD +TY  +L  LC+ G LNEA ++L       
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPN 353

Query: 421 -----HLLNGSSCS--------------------PCLITYNTLIDGLAKKGCMEKAMVLY 455
                 L+NG   S                    P + TYN L+ GL K+G +  A  L 
Sbjct: 354 NAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M   G  P+ IT+  L+ G C+A  +EEA  +L E+  RG  + +  Y  +I  LC+ 
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK 473

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +KV +A+ +L  M +   KPD   +++++  +      +EA++L+  ++
Sbjct: 474 EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML 522



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T N +++ FC  G +    +L + M       D   C  +I GL ++ +++ A + L
Sbjct: 564 DKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFL 623

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  +  G VPD +TYN ++ GLCK G+I+ A+ L D + V G  PD  TYNT +      
Sbjct: 624 RDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKE 683

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           G    A  F+   +  G  P  +T+ +L+  + KQ        VLD++
Sbjct: 684 GMVNDACSFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 7/214 (3%)

Query: 355 EASHSPTVFTYNILINGLC---KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           +  +  T   Y + IN L    K+ L+D+ +    QM  +        +  ++    K G
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLM---QMKEEGIVFRESIFMIIMKHYGKAG 161

Query: 412 MLNEALQLLHLLNGSS-CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
              +A++LL  +     C P   +Y+ +++ L    C + A  ++  M+  G+SP   T 
Sbjct: 162 QPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTF 221

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             ++   C  ++V+ A  LL+++ K G    +  Y+ +IH L +  +V  A+++LE M  
Sbjct: 222 GIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFV 281

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               PD   F+ ++  +       +A KL  +++
Sbjct: 282 MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315


>gi|449508067|ref|XP_004163208.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 224/412 (54%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I  L +  R+++A  ++  +      P+  TY  ++ G C+   +  A A+ D M   G
Sbjct: 208 MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG 267

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+P+ +TY+T++  +   G+ ++A+   ++ ++KG  P + TYTI +  +C     + A+
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E+L  M   GC P+I T+ +L++   + GK++ A+ + + +L+ G+ P ++TYN L++ L
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G ++    I   M      P+  TYN +I   C  G + +A+  F++M+     P++
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +TYNT++   CK+G LN A++LL ++ G+   P   TY  LI G ++ G +E A  L+  
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           MME+GISP+ +T+  +I G+    +V++A+ L  ++ + GN   +  Y ++I G  K+  
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           +  A      M+     P+   +++ +  +  +G T  A+K++ ++ +   F
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF 619



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 222/450 (49%), Gaps = 2/450 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C +G++ +A  ++  + R +  P+     +LI G  R   ++ A  +   M
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+++TY+ ++ GLC  G++  A+ +L+EM   G EP V TY   L ++ D G  
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+       ++GC P + T+T LI  + +      AI +   M  +G  P  VTYN+L
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL 383

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C +G+++ A  +   +LS G  P++ TYN ++      G       I D M +A  
Sbjct: 384 INQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP V TYN LI G CK G ++ A+     M     +PD  TY  ++    + G L  A  
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L + +     SP  +TY  +IDG      ++ A+ L+ +M+E+G  P   T+  +I GF 
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           + + + EA +   ++ K+G       Y   I GLC++ +  +A ++   M    Y P+  
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623

Query: 539 VFSTIVKKVADDGMTEEA--YKLWQKLIEW 566
            +S+++  +  +G  E+A  Y L  +L  +
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 128/457 (28%), Positives = 224/457 (49%), Gaps = 4/457 (0%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L + C  G  ++A +L+  M +R  +P+      LI GL R  + E A  +   M+  G 
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           VP T+TYN ++  LC  G+  +A  +   M   G  P   TYN I++     G  ++A+ 
Sbjct: 374 VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +   L+ G  P +ITY  LI   CKQ  +  A+ +L+ M   G  PD  TY  L++   
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           + GK + A  +   ++  G+ PN +TY  ++    +    D    +   M E+ + P+  
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN++I+G  K   +  A N   +MV +   P+++TY + +  LC+ G    A ++ H +
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMV--LYGQMMENGISPDDITHRTLIWGFCRAD 481
              +  P L TY++LI GL ++G  E A +  L  ++   G  P+  T+ TL+ G C   
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +  EA  L+  + K+G +     YR ++ G CK+ KV+ A+ +   M +  ++   + + 
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYK 733

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE--WKVFEKGTTLL 576
            ++  +  +   EEA  ++Q ++E  W   E   T+L
Sbjct: 734 ALICALCKENFIEEAQCIFQTMLEKHWNSDEVAWTVL 770



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 201/435 (46%), Gaps = 4/435 (0%)

Query: 135 DASKLIDIMARRNQIPDFHFCI----NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           +  ++   ++  N   DF + +     L+  L + D ++ A  +   M+ SG  P  +T+
Sbjct: 146 EVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTF 205

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N M+  LCK+G+++ A  ++  +      P+  TY +++     N     A   +   ++
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVK 265

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            GC P  +TY+ LI  +C +  +  A+++L++M  +G  P + TY   +   C  G   +
Sbjct: 266 DGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSE 325

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           AV ++  +  RG  PN  T+  L+  L   G ++    +   M      PT  TYN LIN
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
            LC  G  + A   F  M+S    P   TYN ++   C  G + +A+ +   +  +  SP
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            +ITYNTLI G  K+G +  AM L   M  NG+ PD  T+  LI GF R  ++E A  L 
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
             + + G    +  Y  +I G     KVD A+ +   M+ S   P    ++ ++   +  
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565

Query: 551 GMTEEAYKLWQKLIE 565
               EA     K+++
Sbjct: 566 NSISEAENFCGKMVK 580



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 108/443 (24%), Positives = 196/443 (44%), Gaps = 37/443 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G+   A  +   M     +P       +I+    +  I+KA  +   M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G  P+ ITYN ++ G CK+G + +A+ LL+ M  +G +PD  TY  ++      GK 
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A   +   +  G  P  +TYT +I+       +  A+ +   M   G  P   TYN +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K     +A      ++ +G+ PN ITY + +  L   G      KI   M + ++
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 359 SPTVFTYNILINGLCKYGLVDRA--INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            P ++TY+ LI GLC+ G  + A   N   ++    C+P++ TY T++  LC EG   EA
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            QL+                                     M + G+ P +  +R L+ G
Sbjct: 679 DQLV-----------------------------------VSMQKKGLQPSEEIYRALLIG 703

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C+  +VE A+++   +   G ++  S Y+ +I  LCK   ++ A  + + M+   +  D
Sbjct: 704 ECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSD 763

Query: 537 DTVFSTIVKKVADDGMTEEAYKL 559
           +  ++ ++  +  +G T+   KL
Sbjct: 764 EVAWTVLLDGLLKEGETDLCLKL 786



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 185/390 (47%), Gaps = 7/390 (1%)

Query: 192 MMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQ---AIGFWKD 247
           +M+      G+++     L E+ S       + ++ T+L  +   GKF     A   +  
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQL---GKFDMVDLARDMYIK 192

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            L  G  P L+T+  +I  +CK+  +  A  ++  +      P+  TY SL+   C+   
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D A  + + ++  G +PNS+TY+TL++ L S G  +    +L+ M +    PTV+TY I
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
            +  LC  G    A+    +M  + C P+I T+  ++  L ++G    A+ L H +    
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P  +TYN LI+ L  +G  E A  ++  M+ +G  P   T+  +I  FC    +++A+
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            +  ++ K G+      Y  +I+G CK   ++ A+++LE+M  +  KPD   ++ ++   
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492

Query: 548 ADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           +  G  E A  L+  ++E  +     T  A
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVTYTA 522



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 191/428 (44%), Gaps = 18/428 (4%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           SLPS+         +T N+I++ FC  G +  A  + D M +    P+      LI G  
Sbjct: 408 SLPST---------QTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           +   +  A ++L+IM  +G  PD  TY  ++ G  + G++  A +L   M   G  P+ +
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518

Query: 224 TYNTILRTMFDNGKFKQAIG-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           TY  I+   F+  K   A+  FWK  +  G  P   TY ++I    K   I+ A      
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWK-MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  +G  P+++TY S ++  C+ G+   A  + + +  R   PN  TY++L++ L   G 
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637

Query: 343 WDAVDKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            +  + + +++   +H    P V TY  L+ GLC  G    A      M  K  QP    
Sbjct: 638 AEDAE-MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  +L   CK   +  AL + + ++       L  Y  LI  L K+  +E+A  ++  M+
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           E   + D++    L+ G  +  + +  + LL  +  R   +    Y ++   L     +D
Sbjct: 757 EKHWNSDEVAWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL---SALD 813

Query: 520 MAIQVLEL 527
            AI++ ++
Sbjct: 814 CAIKIPQI 821


>gi|449463386|ref|XP_004149415.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 830

 Score =  226 bits (577), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 224/412 (54%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I  L +  R+++A  ++  +      P+  TY  ++ G C+   +  A A+ D M   G
Sbjct: 208 MINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVKDG 267

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+P+ +TY+T++  +   G+ ++A+   ++ ++KG  P + TYTI +  +C     + A+
Sbjct: 268 CDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSEAV 327

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E+L  M   GC P+I T+ +L++   + GK++ A+ + + +L+ G+ P ++TYN L++ L
Sbjct: 328 ELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALINQL 387

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G ++    I   M      P+  TYN +I   C  G + +A+  F++M+     P++
Sbjct: 388 CVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNV 447

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +TYNT++   CK+G LN A++LL ++ G+   P   TY  LI G ++ G +E A  L+  
Sbjct: 448 ITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYG 507

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           MME+GISP+ +T+  +I G+    +V++A+ L  ++ + GN   +  Y ++I G  K+  
Sbjct: 508 MMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKTNS 567

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           +  A      M+     P+   +++ +  +  +G T  A+K++ ++ +   F
Sbjct: 568 ISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYF 619



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 222/450 (49%), Gaps = 2/450 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C +G++ +A  ++  + R +  P+     +LI G  R   ++ A  +   M
Sbjct: 204 TFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRM 263

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+++TY+ ++ GLC  G++  A+ +L+EM   G EP V TY   L ++ D G  
Sbjct: 264 VKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCS 323

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+       ++GC P + T+T LI  + +      AI +   M  +G  P  VTYN+L
Sbjct: 324 SEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNAL 383

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C +G+++ A  +   +LS G  P++ TYN ++      G       I D M +A  
Sbjct: 384 INQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGS 443

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP V TYN LI G CK G ++ A+     M     +PD  TY  ++    + G L  A  
Sbjct: 444 SPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATS 503

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L + +     SP  +TY  +IDG      ++ A+ L+ +M+E+G  P   T+  +I GF 
Sbjct: 504 LFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFS 563

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           + + + EA +   ++ K+G       Y   I GLC++ +  +A ++   M    Y P+  
Sbjct: 564 KTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLY 623

Query: 539 VFSTIVKKVADDGMTEEA--YKLWQKLIEW 566
            +S+++  +  +G  E+A  Y L  +L  +
Sbjct: 624 TYSSLIYGLCQEGRAEDAEMYNLLARLTHY 653



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 219/444 (49%), Gaps = 2/444 (0%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L + C  G  ++A +L+  M +R  +P+      LI GL R  + E A  +   M+  G 
Sbjct: 314 LVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGL 373

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           VP T+TYN ++  LC  G+  +A  +   M   G  P   TYN I++     G  ++A+ 
Sbjct: 374 VPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMV 433

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +   L+ G  P +ITY  LI   CKQ  +  A+ +L+ M   G  PD  TY  L++   
Sbjct: 434 IFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFS 493

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           + GK + A  +   ++  G+ PN +TY  ++    +    D    +   M E+ + P+  
Sbjct: 494 RGGKLEHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQ 553

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN++I+G  K   +  A N   +MV +   P+++TY + +  LC+ G    A ++ H +
Sbjct: 554 TYNVMISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEM 613

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMV--LYGQMMENGISPDDITHRTLIWGFCRAD 481
              +  P L TY++LI GL ++G  E A +  L  ++   G  P+  T+ TL+ G C   
Sbjct: 614 EKRNYFPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEG 673

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +  EA  L+  + K+G +     YR ++ G CK+ KV+ A+ +   M +  ++   + + 
Sbjct: 674 RCYEADQLVVSMQKKGLQPSEEIYRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYK 733

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++  +  +   EEA  ++Q ++E
Sbjct: 734 ALICALCKENFIEEAQCIFQTMLE 757



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 201/435 (46%), Gaps = 4/435 (0%)

Query: 135 DASKLIDIMARRNQIPDFHFCI----NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           +  ++   ++  N   DF + +     L+  L + D ++ A  +   M+ SG  P  +T+
Sbjct: 146 EVKRVTQFLSEINSKYDFGYTLCSFTTLLIQLGKFDMVDLARDMYIKMLNSGIRPSLLTF 205

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N M+  LCK+G+++ A  ++  +      P+  TY +++     N     A   +   ++
Sbjct: 206 NTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHNLDLAFAMFDRMVK 265

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            GC P  +TY+ LI  +C +  +  A+++L++M  +G  P + TY   +   C  G   +
Sbjct: 266 DGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTIPLVSLCDAGCSSE 325

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           AV ++  +  RG  PN  T+  L+  L   G ++    +   M      PT  TYN LIN
Sbjct: 326 AVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADGLVPTTVTYNALIN 385

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
            LC  G  + A   F  M+S    P   TYN ++   C  G + +A+ +   +  +  SP
Sbjct: 386 QLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSP 445

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            +ITYNTLI G  K+G +  AM L   M  NG+ PD  T+  LI GF R  ++E A  L 
Sbjct: 446 NVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLF 505

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
             + + G    +  Y  +I G     KVD A+ +   M+ S   P    ++ ++   +  
Sbjct: 506 YGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVMISGFSKT 565

Query: 551 GMTEEAYKLWQKLIE 565
               EA     K+++
Sbjct: 566 NSISEAENFCGKMVK 580



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 197/443 (44%), Gaps = 37/443 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G+   A  +   M     +P       +I+    +  I+KA  +   M
Sbjct: 379 TYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAMVIFDKM 438

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G  P+ ITYN ++ G CK+G + +A+ LL+ M  +G +PD  TY  ++      GK 
Sbjct: 439 LKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKL 498

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A   +   +  G  P  +TYT +I+       +  A+ +   M   G  P   TYN +
Sbjct: 499 EHATSLFYGMMEHGISPNHVTYTAIIDGYFNLAKVDDALALFWKMVESGNLPSSQTYNVM 558

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K     +A      ++ +G+ PN ITY + +  L   G      KI   M + ++
Sbjct: 559 ISGFSKTNSISEAENFCGKMVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNY 618

Query: 359 SPTVFTYNILINGLCKYGLVDRA--INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            P ++TY+ LI GLC+ G  + A   N   ++    C+P++ TY T++  LC EG   EA
Sbjct: 619 FPNLYTYSSLIYGLCQEGRAEDAEMYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEA 678

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            QL+                                     M + G+ P +  +R L+ G
Sbjct: 679 DQLV-----------------------------------VSMQKKGLQPSEEIYRALLIG 703

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C+  +VE A+++   +   G ++  S Y+ +I  LCK   ++ A  + + M+   +  D
Sbjct: 704 ECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTMLEKHWNSD 763

Query: 537 DTVFSTIVKKVADDGMTEEAYKL 559
           + V++ ++  +  +G T+   KL
Sbjct: 764 EVVWTVLLDGLLKEGETDLCLKL 786



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/390 (25%), Positives = 185/390 (47%), Gaps = 7/390 (1%)

Query: 192 MMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQ---AIGFWKD 247
           +M+      G+++     L E+ S       + ++ T+L  +   GKF     A   +  
Sbjct: 136 LMIKSCRNEGEVKRVTQFLSEINSKYDFGYTLCSFTTLLIQL---GKFDMVDLARDMYIK 192

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            L  G  P L+T+  +I  +CK+  +  A  ++  +      P+  TY SL+   C+   
Sbjct: 193 MLNSGIRPSLLTFNTMINILCKKGRVQEAKLIMSHIFRYDAYPNAFTYTSLILGHCRNHN 252

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D A  + + ++  G +PNS+TY+TL++ L S G  +    +L+ M +    PTV+TY I
Sbjct: 253 LDLAFAMFDRMVKDGCDPNSVTYSTLINGLCSEGRLEEAMDMLEEMVQKGIEPTVYTYTI 312

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
            +  LC  G    A+    +M  + C P+I T+  ++  L ++G    A+ L H +    
Sbjct: 313 PLVSLCDAGCSSEAVELLGKMKKRGCVPNIQTFTALISGLSRDGKFEIAIGLYHKMLADG 372

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P  +TYN LI+ L  +G  E A  ++  M+ +G  P   T+  +I  FC    +++A+
Sbjct: 373 LVPTTVTYNALINQLCVEGRFETAFTIFKWMLSHGSLPSTQTYNEIIKCFCLMGDIQKAM 432

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            +  ++ K G+      Y  +I+G CK   ++ A+++LE+M  +  KPD   ++ ++   
Sbjct: 433 VIFDKMLKAGSSPNVITYNTLIYGYCKQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGF 492

Query: 548 ADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           +  G  E A  L+  ++E  +     T  A
Sbjct: 493 SRGGKLEHATSLFYGMMEHGISPNHVTYTA 522



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 191/428 (44%), Gaps = 18/428 (4%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           SLPS+         +T N+I++ FC  G +  A  + D M +    P+      LI G  
Sbjct: 408 SLPST---------QTYNEIIKCFCLMGDIQKAMVIFDKMLKAGSSPNVITYNTLIYGYC 458

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           +   +  A ++L+IM  +G  PD  TY  ++ G  + G++  A +L   M   G  P+ +
Sbjct: 459 KQGNLNNAMRLLEIMKGNGLKPDAWTYTELISGFSRGGKLEHATSLFYGMMEHGISPNHV 518

Query: 224 TYNTILRTMFDNGKFKQAIG-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           TY  I+   F+  K   A+  FWK  +  G  P   TY ++I    K   I+ A      
Sbjct: 519 TYTAIIDGYFNLAKVDDALALFWK-MVESGNLPSSQTYNVMISGFSKTNSISEAENFCGK 577

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  +G  P+++TY S ++  C+ G+   A  + + +  R   PN  TY++L++ L   G 
Sbjct: 578 MVKQGLLPNVITYTSFIDGLCRNGRTGLAFKIFHEMEKRNYFPNLYTYSSLIYGLCQEGR 637

Query: 343 WDAVDKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            +  + + +++   +H    P V TY  L+ GLC  G    A      M  K  QP    
Sbjct: 638 AEDAE-MYNLLARLTHYGCEPNVDTYTTLVKGLCGEGRCYEADQLVVSMQKKGLQPSEEI 696

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  +L   CK   +  AL + + ++       L  Y  LI  L K+  +E+A  ++  M+
Sbjct: 697 YRALLIGECKNLKVESALNIFYSMDTLGFQLHLSDYKALICALCKENFIEEAQCIFQTML 756

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           E   + D++    L+ G  +  + +  + LL  +  R   +    Y ++   L     +D
Sbjct: 757 EKHWNSDEVVWTVLLDGLLKEGETDLCLKLLHVMESRNCTLNFQTYVMLAREL---SALD 813

Query: 520 MAIQVLEL 527
            AI++ ++
Sbjct: 814 CAIKIPQI 821


>gi|334183590|ref|NP_176479.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179661|sp|Q9LQ16.1|PPR94_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62910
 gi|8493578|gb|AAF75801.1|AC011000_4 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats [Arabidopsis thaliana]
 gi|332195899|gb|AEE34020.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 632

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 238/486 (48%), Gaps = 35/486 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  T +  +  FC R +L+ A  ++  M +    PD     +L+ G     RI  A 
Sbjct: 114 ISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAV 173

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PDT T+  ++ GL    +   A+AL+D+M   GC+PD++TY T++  +
Sbjct: 174 ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGL 233

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+   K   +      ++ Y  +I+ +CK   +  A+ +  +M  +G  PD+
Sbjct: 234 CKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDV 293

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY+SL++  C  G++ DA  ++++++ R + PN +T++ L+ +    G     +K+ D 
Sbjct: 294 FTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDE 353

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M + S  P +FTY+ LING C +  +D A + F  M+SK+C P++VTY+T++   CK   
Sbjct: 354 MIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKR 413

Query: 413 LNEALQLLH--------------------LLNGSSCS---------------PCLITYNT 437
           + E ++L                            C                P ++TYN 
Sbjct: 414 VEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 473

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           L+DGL K G + KAMV++  +  + + PD  T+  +I G C+A +VE+  +L   +  +G
Sbjct: 474 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKG 533

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                 AY  +I G C+    + A  +L+ M      P+   ++T+++    DG  E + 
Sbjct: 534 VSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASA 593

Query: 558 KLWQKL 563
           +L +++
Sbjct: 594 ELIKEM 599



 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 230/479 (48%), Gaps = 36/479 (7%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + +L  +C   +++DA  L+D M      PD      LI GL   ++  +A  
Sbjct: 150 EPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVA 209

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  PD +TY  +V GLCKRG I  A++LL +M     E DV+ YNTI+  + 
Sbjct: 210 LVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLC 269

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
                  A+  + +   KG  P + TY+ LI  +C     + A  +L DM     +P++V
Sbjct: 270 KYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVV 329

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+++L++   K+GK  +A  + + ++ R ++P+  TY++L++        D    + ++M
Sbjct: 330 TFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELM 389

Query: 354 NEASHSPTVFTYNILINGLCKY----------------GLV------------------- 378
                 P V TY+ LI G CK                 GLV                   
Sbjct: 390 ISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 449

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A   F QMVS    P+I+TYN +L  LCK G L +A+ +   L  S+  P + TYN +
Sbjct: 450 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 509

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I+G+ K G +E    L+  +   G+SP+ I + T+I GFCR    EEA  LLK++ + G 
Sbjct: 510 IEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSKEEADSLLKKMKEDGP 569

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
              +  Y  +I    +    + + ++++ M S  +  D +    +V  +  DG  ++++
Sbjct: 570 LPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDKSF 627



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/432 (27%), Positives = 217/432 (50%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           K+ DA  L   M +    P       L+  + ++++ E    + + M   G   D  TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           + +   C+R Q+  A+A+L +M   G EPD++T +++L     + +   A+      +  
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P   T+T LI  +      + A+ ++D M   GC PD+VTY ++VN  CK+G  D A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + ++  +    +E + + YNT++  L      D    +   M+     P VFTY+ LI+ 
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           LC YG    A    + M+ +   P++VT++ ++ A  KEG L EA +L   +   S  P 
Sbjct: 303 LCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPD 362

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           + TY++LI+G      +++A  ++  M+     P+ +T+ TLI GFC+A +VEE ++L +
Sbjct: 363 IFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFR 422

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           E+ +RG       Y  +IHG  +++  D A  V + M+S    P+   ++ ++  +  +G
Sbjct: 423 EMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNG 482

Query: 552 MTEEAYKLWQKL 563
              +A  +++ L
Sbjct: 483 KLAKAMVVFEYL 494



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/357 (28%), Positives = 171/357 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    N I+   C    + DA  L   M  +   PD     +LI  L    R   AS
Sbjct: 254 IEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDAS 313

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+     P+ +T++ ++    K G++  A  L DEM     +PD+ TY++++   
Sbjct: 314 RLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGF 373

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   ++  + K C P ++TY+ LI+  CK   +   +E+  +M+  G   + 
Sbjct: 374 CMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNT 433

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY +L++   +    D+A +V   ++S G+ PN +TYN LL  L   G       + + 
Sbjct: 434 VTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEY 493

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +  ++  P ++TYNI+I G+CK G V+     F  +  K   P+++ YNT++   C++G 
Sbjct: 494 LQRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGS 553

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
             EA  LL  +      P   TYNTLI    + G  E +  L  +M   G + D  T
Sbjct: 554 KEEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 610



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 177/376 (47%), Gaps = 38/376 (10%)

Query: 225 YNTILRT-MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           Y  ILR  + D  K   A+  + D ++    P ++ +  L+  V K       I + + M
Sbjct: 50  YREILRNRLSDIIKVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQM 109

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGC 342
              G S D+ TY+  +N  C++ +   A+ V+  ++  G EP+ +T ++LL+    S+  
Sbjct: 110 QTLGISHDLYTYSIFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRI 169

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            DAV  ++D M E  + P  FT+  LI+GL  +     A+   +QMV + CQPD+VTY T
Sbjct: 170 SDAV-ALVDQMVEMGYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGT 228

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           V+  LCK G ++ AL LL  +        ++ YNT+IDGL K   M+ A+ L+ +M   G
Sbjct: 229 VVNGLCKRGDIDLALSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKG 288

Query: 463 ISPDDITHRTLI--------W---------------------------GFCRADQVEEAV 487
           I PD  T+ +LI        W                            F +  ++ EA 
Sbjct: 289 IRPDVFTYSSLISCLCNYGRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAE 348

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L  E+ KR        Y  +I+G C   ++D A  + ELMIS    P+   +ST++K  
Sbjct: 349 KLYDEMIKRSIDPDIFTYSSLINGFCMHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGF 408

Query: 548 ADDGMTEEAYKLWQKL 563
                 EE  +L++++
Sbjct: 409 CKAKRVEEGMELFREM 424



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/376 (25%), Positives = 174/376 (46%), Gaps = 8/376 (2%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           E+ V+  N  + GL   K   D        D   +  D  T + ++   C+ G+ +DAS+
Sbjct: 255 EADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNYGRWSDASR 314

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L+  M  R   P+      LI   ++  ++ +A K+   M+     PD  TY+ ++ G C
Sbjct: 315 LLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSIDPDIFTYSSLINGFC 374

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
              ++  A  + + M    C P+V+TY+T+++      + ++ +  +++  ++G     +
Sbjct: 375 MHDRLDEAKHMFELMISKDCFPNVVTYSTLIKGFCKAKRVEEGMELFREMSQRGLVGNTV 434

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TYT LI    +      A  V   M   G  P+I+TYN L++  CK GK   A++V   L
Sbjct: 435 TYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYL 494

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
               MEP+  TYN ++  +   G  +   ++   ++    SP V  YN +I+G C+ G  
Sbjct: 495 QRSTMEPDIYTYNIMIEGMCKAGKVEDGWELFCNLSLKGVSPNVIAYNTMISGFCRKGSK 554

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN-----GSSCSPCLI 433
           + A +   +M      P+  TYNT++ A  ++G    + +L+  +      G + +  L+
Sbjct: 555 EEADSLLKKMKEDGPLPNSGTYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLV 614

Query: 434 TYNTLIDGLAKKGCME 449
           T N L DG   K  ++
Sbjct: 615 T-NMLHDGRLDKSFLD 629



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 74/293 (25%), Positives = 144/293 (49%)

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+++  DM      P IV +N L++   K  K++  + +   + + G+  +  TY+  ++
Sbjct: 67  AVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYSIFIN 126

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               R        +L  M +  + P + T + L+NG C    +  A+   +QMV    +P
Sbjct: 127 CFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEMGYKP 186

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D  T+ T++  L      +EA+ L+  +    C P L+TY T+++GL K+G ++ A+ L 
Sbjct: 187 DTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLALSLL 246

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M +  I  D + + T+I G C+   +++A++L  E+  +G +     Y  +I  LC  
Sbjct: 247 KKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISCLCNY 306

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            +   A ++L  MI  +  P+   FS ++     +G   EA KL+ ++I+  +
Sbjct: 307 GRWSDASRLLSDMIERKINPNVVTFSALIDAFVKEGKLVEAEKLYDEMIKRSI 359



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 71/262 (27%), Positives = 134/262 (51%)

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K DDAV +  +++     P+ + +N LL ++     ++ V  + + M     S  ++TY+
Sbjct: 63  KVDDAVDLFGDMVKSRPFPSIVEFNKLLSAVAKMNKFELVISLGEQMQTLGISHDLYTYS 122

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           I IN  C+   +  A+    +M+    +PDIVT +++L   C    +++A+ L+  +   
Sbjct: 123 IFINCFCRRSQLSLALAVLAKMMKLGYEPDIVTLSSLLNGYCHSKRISDAVALVDQMVEM 182

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P   T+ TLI GL       +A+ L  QM++ G  PD +T+ T++ G C+   ++ A
Sbjct: 183 GYKPDTFTFTTLIHGLFLHNKASEAVALVDQMVQRGCQPDLVTYGTVVNGLCKRGDIDLA 242

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + LLK++ K   +     Y  +I GLCK K +D A+ +   M +   +PD   +S+++  
Sbjct: 243 LSLLKKMEKGKIEADVVIYNTIIDGLCKYKHMDDALNLFTEMDNKGIRPDVFTYSSLISC 302

Query: 547 VADDGMTEEAYKLWQKLIEWKV 568
           + + G   +A +L   +IE K+
Sbjct: 303 LCNYGRWSDASRLLSDMIERKI 324


>gi|302143622|emb|CBI22375.3| unnamed protein product [Vitis vinifera]
          Length = 407

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 114/309 (36%), Positives = 175/309 (56%), Gaps = 1/309 (0%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+L   C  GK  ++   ++ +  +   PD   C  LI+G      IEKAS+V++I+  S
Sbjct: 73  KLLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ES 131

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
              PD   YN ++ G CK  +I +A  +L+ M   G  PD++TYN ++ ++ +  K   A
Sbjct: 132 HTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLA 191

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +      L   C P +ITYTILIE    + GI  A+++L++M   G  PD+ TYN+++  
Sbjct: 192 LKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRG 251

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK+G +D+   ++  + SRG EPN +TY+ L+ SL   G  D    +L +M E   +P 
Sbjct: 252 MCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPD 311

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++Y+ LI+ LCK G +D AI   + M+S  C PDIV YNT+L ALCK G  N+AL++ +
Sbjct: 312 TYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFN 371

Query: 422 LLNGSSCSP 430
            L G  C P
Sbjct: 372 KLRGMGCPP 380



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 80/275 (29%), Positives = 152/275 (55%), Gaps = 1/275 (0%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+++ F +   +  AS++++I+    + PD      +I G  +++RIE A++VL  M   
Sbjct: 108 KLIKGFFNFKNIEKASRVMEILESHTE-PDVFAYNAVISGFCKVNRIEAATQVLNRMKAR 166

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G +PD +TYN+M+G LC R ++  A+ +LD++ +  C P VITY  ++      G   +A
Sbjct: 167 GFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEA 226

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   ++ L +G  P + TY  +I  +CK+       +++ +M   GC P+ VTY+ L++ 
Sbjct: 227 MKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISS 286

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+ G+ D+A+ V+  ++ + + P++ +Y+ L+ +L   G  D    I+D M      P 
Sbjct: 287 LCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPD 346

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           +  YN ++  LCK G  ++A+  FN++    C P+
Sbjct: 347 IVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 381



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 81/267 (30%), Positives = 144/267 (53%), Gaps = 1/267 (0%)

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N SCK GK+++++  +  L+++G  P+ I    L+    +    +   ++++I+ E+ 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEIL-ESH 132

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P VF YN +I+G CK   ++ A    N+M ++   PDIVTYN ++G+LC    L  AL
Sbjct: 133 TEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLAL 192

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++L  L   +C P +ITY  LI+    +G + +AM L  +M+  G+ PD  T+  +I G 
Sbjct: 193 KVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGM 252

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+    +E   L+ E+  RG +     Y ++I  LC+  ++D AI VL++MI     PD 
Sbjct: 253 CKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDT 312

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
             +  ++  +  +G  + A  +   +I
Sbjct: 313 YSYDPLISALCKEGRLDLAIGIMDYMI 339



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 152/300 (50%), Gaps = 1/300 (0%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           CK G+   ++  L+ +   G  PDVI    +++  F+    ++A     + L     P +
Sbjct: 79  CKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVM-EILESHTEPDV 137

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
             Y  +I   CK   I  A +VL+ M   G  PDIVTYN ++   C + K   A+ V++ 
Sbjct: 138 FAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQ 197

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           LL     P  ITY  L+ +    G  +   K+L+ M      P ++TYN +I G+CK G+
Sbjct: 198 LLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGM 257

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            D       +M S+ C+P+ VTY+ ++ +LC+ G ++EA+ +L ++     +P   +Y+ 
Sbjct: 258 WDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDP 317

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI  L K+G ++ A+ +   M+ NG  PD + + T++   C+     +A+++  ++   G
Sbjct: 318 LISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMG 377



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 83/303 (27%), Positives = 155/303 (51%), Gaps = 5/303 (1%)

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN--FSCKQGKYDDAVLVINNLLS 320
           L+ + CK      ++  L+ +  +G +PD++    L+   F+ K  +    V+ I   L 
Sbjct: 74  LLNRSCKAGKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEI---LE 130

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
              EP+   YN ++         +A  ++L+ M      P + TYNI+I  LC    +  
Sbjct: 131 SHTEPDVFAYNAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGL 190

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+   +Q++  NC P ++TY  ++ A   EG +NEA++LL  +      P + TYN +I 
Sbjct: 191 ALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIR 250

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G+ K+G  ++   L  +M   G  P+ +T+  LI   CR  +++EA+ +LK + ++    
Sbjct: 251 GMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTP 310

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              +Y  +I  LCK  ++D+AI +++ MIS+   PD   ++TI+  +  +G   +A +++
Sbjct: 311 DTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIF 370

Query: 561 QKL 563
            KL
Sbjct: 371 NKL 373



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 157/302 (51%), Gaps = 1/302 (0%)

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GKF +++ F +  + KG  P +I  T LI+       I +A  V++ +      PD+  Y
Sbjct: 82  GKFNESLYFLECLVNKGYTPDVILCTKLIKGFFNFKNIEKASRVMEILE-SHTEPDVFAY 140

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++  CK  + + A  V+N + +RG  P+ +TYN ++ SL +R       K+LD +  
Sbjct: 141 NAVISGFCKVNRIEAATQVLNRMKARGFLPDIVTYNIMIGSLCNRRKLGLALKVLDQLLL 200

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  PTV TY ILI      G ++ A+    +M+++   PD+ TYN ++  +CKEGM +E
Sbjct: 201 DNCMPTVITYTILIEATIVEGGINEAMKLLEEMLARGLLPDMYTYNAIIRGMCKEGMWDE 260

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
             +L+  +    C P  +TY+ LI  L + G +++A+ +   M+E  ++PD  ++  LI 
Sbjct: 261 GEKLVAEMFSRGCEPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLIS 320

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             C+  +++ A+ ++  +   G       Y  ++  LCK+   + A+++   +      P
Sbjct: 321 ALCKEGRLDLAIGIMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPP 380

Query: 536 DD 537
           +D
Sbjct: 381 ND 382



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 71/211 (33%), Positives = 110/211 (52%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + C+R KL  A K++D +   N +P       LI   I    I +A K+L
Sbjct: 171 DIVTYNIMIGSLCNRRKLGLALKVLDQLLLDNCMPTVITYTILIEATIVEGGINEAMKLL 230

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G +PD  TYN ++ G+CK G       L+ EM   GCEP+ +TY+ ++ ++   
Sbjct: 231 EEMLARGLLPDMYTYNAIIRGMCKEGMWDEGEKLVAEMFSRGCEPNKVTYSILISSLCRF 290

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +AI   K  + K   P   +Y  LI  +CK+  +  AI ++D M   GC PDIV Y
Sbjct: 291 GRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIGIMDYMISNGCLPDIVNY 350

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           N+++   CK G  + A+ + N L   G  PN
Sbjct: 351 NTILAALCKNGNANQALEIFNKLRGMGCPPN 381



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 27/108 (25%), Positives = 58/108 (53%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E ++ T + ++ + C  G++ +A  ++ +M  +   PD +    LI  L +  R++ A  
Sbjct: 274 EPNKVTYSILISSLCRFGRIDEAISVLKVMIEKELTPDTYSYDPLISALCKEGRLDLAIG 333

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
           ++  M+ +G +PD + YN ++  LCK G    A+ + +++   GC P+
Sbjct: 334 IMDYMISNGCLPDIVNYNTILAALCKNGNANQALEIFNKLRGMGCPPN 381


>gi|449443698|ref|XP_004139614.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Cucumis sativus]
          Length = 732

 Score =  226 bits (576), Expect = 2e-56,   Method: Compositional matrix adjust.
 Identities = 132/444 (29%), Positives = 239/444 (53%), Gaps = 5/444 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++     + ++++A KL++ M     +PD     ++I GL ++++I  A+K++  M++ G
Sbjct: 259 LIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRG 318

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TY  ++ GLC+ G++  A  +L ++      P+    NT++     +G+ K+A 
Sbjct: 319 FYPDNMTYGFLLHGLCRIGKLNEARKILIKIPC----PNNAILNTLINGYVMSGQLKEAQ 374

Query: 243 GFWKDQL-RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
            F  + +   G  P + TY IL+  +CK+  ++ A +++++M+  GC P+++TY  LVN 
Sbjct: 375 SFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNG 434

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK G  ++A LV++ + +RG+  NS+ YN L+ +L  +        +L  M      P 
Sbjct: 435 LCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPD 494

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           +FTYN LI GLCK   +D A   F+ M+      + VTYNT++ AL + G   +AL L++
Sbjct: 495 LFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGAVANNVTYNTLIHALLRRGAFQKALTLVN 554

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +    C+   ITYN LI    K G +EK + LY QM+ +G+  D I+   +I G C+  
Sbjct: 555 DMLFRGCTLDKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVG 614

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V+ A + L++   RG       Y  V++GLCK  ++  A+ + + +     +PD   ++
Sbjct: 615 KVDNAFEFLRDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYN 674

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
           T +     +GM  +A   + + IE
Sbjct: 675 TFISWQCKEGMVNDACLFFYRGIE 698



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 228/457 (49%), Gaps = 37/457 (8%)

Query: 141 DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           D++++      F F I +++ L   + ++ A  +L+ M   G VP++I Y  ++  L ++
Sbjct: 208 DMLSKGVSPTVFTFGI-VMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQK 266

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
            Q+  A+ LL+EM V GC PDV T+N ++  +    K   A       L +G  P  +TY
Sbjct: 267 NQVSEALKLLEEMFVMGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTY 326

Query: 261 TILIEQVCKQCGIARAIEVL--------------------------------DDMAIEGC 288
             L+  +C+   +  A ++L                                + M   G 
Sbjct: 327 GFLLHGLCRIGKLNEARKILIKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGF 386

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PDI TYN L++  CK+G    A  ++N +  RG EPN ITY  L++ L   G  +    
Sbjct: 387 QPDIFTYNILMHGLCKEGSLSFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGL 446

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M+    +     YN LI  LC+   V  A+N  ++M +K C+PD+ TYN+++  LC
Sbjct: 447 VLHEMSARGLTINSVIYNCLICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLC 506

Query: 409 KEGMLNEALQLLH--LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           K   ++EA +L H  LL+G+  +   +TYNTLI  L ++G  +KA+ L   M+  G + D
Sbjct: 507 KVDRIDEAFRLFHNMLLDGAVANN--VTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLD 564

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            IT+  LI  FC+   +E+ ++L +++   G      +  ++I+GLCK  KVD A + L 
Sbjct: 565 KITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLR 624

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             I+  + PD   +++++  +   G  +EA  L+ +L
Sbjct: 625 DAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRL 661



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 217/443 (48%), Gaps = 32/443 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +T N ++   C   K+ DA+KL+D M  R   PD      L+ GL RI ++ +A K+L
Sbjct: 287 DVQTFNDVIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKIL 346

Query: 176 --------------------------------QIMVMSGGVPDTITYNMMVGGLCKRGQI 203
                                           + M+  G  PD  TYN+++ GLCK G +
Sbjct: 347 IKIPCPNNAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSL 406

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A  L++EMS  GCEP+VITY  ++  +   G  ++A     +   +G     + Y  L
Sbjct: 407 SFARDLVNEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCL 466

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I  +C++  +  A+ +L +M  +GC PD+ TYNSL+   CK  + D+A  + +N+L  G 
Sbjct: 467 ICALCRKEKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNMLLDGA 526

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             N++TYNTL+H+L  RG +     +++ M     +    TYN LI   CK G +++ + 
Sbjct: 527 VANNVTYNTLIHALLRRGAFQKALTLVNDMLFRGCTLDKITYNGLIKAFCKVGNIEKGLE 586

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            + QM+      D ++ N ++  LCK G ++ A + L         P ++TYN++++GL 
Sbjct: 587 LYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFLRDAINRGFVPDIVTYNSVLNGLC 646

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G +++A+ L+ ++   G+ PD  T+ T I   C+   V +A        + G    N 
Sbjct: 647 KVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKEGMVNDACLFFYRGIENGFVPSNL 706

Query: 504 AYRLVIHGLCKSKKVDMAIQVLE 526
            + ++++ L K    +    VL+
Sbjct: 707 TWNVLVYTLLKQSNQENNFFVLD 729



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/409 (27%), Positives = 188/409 (45%), Gaps = 33/409 (8%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD- 247
            Y + +  L   G+ +    LL +M   G       +  I++     G+  QAI    D 
Sbjct: 114 VYYVFINKLGAIGKFKLIDKLLMQMKEEGIVFRESIFMIIMKHYGKAGQPGQAIRLLLDM 173

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
           +    C P   +Y +++E +        A  V  DM  +G SP + T+  ++   C   +
Sbjct: 174 RAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTFGIVMKALCMFNE 233

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D A  ++ ++   G  PNSI Y TL+H+L  +       K+L+ M      P V T+N 
Sbjct: 234 VDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFVMGCMPDVQTFND 293

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL------- 420
           +I+GLCK   +  A    ++M+ +   PD +TY  +L  LC+ G LNEA ++L       
Sbjct: 294 VIHGLCKVNKIHDATKLVDRMLLRGFYPDNMTYGFLLHGLCRIGKLNEARKILIKIPCPN 353

Query: 421 -----HLLNGSSCS--------------------PCLITYNTLIDGLAKKGCMEKAMVLY 455
                 L+NG   S                    P + TYN L+ GL K+G +  A  L 
Sbjct: 354 NAILNTLINGYVMSGQLKEAQSFLNETMINFGFQPDIFTYNILMHGLCKEGSLSFARDLV 413

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M   G  P+ IT+  L+ G C+A  +EEA  +L E+  RG  + +  Y  +I  LC+ 
Sbjct: 414 NEMSRRGCEPNVITYAILVNGLCKAGLLEEAGLVLHEMSARGLTINSVIYNCLICALCRK 473

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +KV +A+ +L  M +   KPD   +++++  +      +EA++L+  ++
Sbjct: 474 EKVHVALNLLSEMCTKGCKPDLFTYNSLIYGLCKVDRIDEAFRLFHNML 522



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 51/168 (30%), Positives = 84/168 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T N +++ FC  G +    +L + M       D   C  +I GL ++ +++ A + L
Sbjct: 564 DKITYNGLIKAFCKVGNIEKGLELYEQMIMDGLGADTISCNIMINGLCKVGKVDNAFEFL 623

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  +  G VPD +TYN ++ GLCK G+I+ A+ L D + V G  PD  TYNT +      
Sbjct: 624 RDAINRGFVPDIVTYNSVLNGLCKVGRIKEALNLFDRLQVEGVRPDAFTYNTFISWQCKE 683

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           G    A  F+   +  G  P  +T+ +L+  + KQ        VLD++
Sbjct: 684 GMVNDACLFFYRGIENGFVPSNLTWNVLVYTLLKQSNQENNFFVLDEL 731



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 48/214 (22%), Positives = 97/214 (45%), Gaps = 7/214 (3%)

Query: 355 EASHSPTVFTYNILINGLC---KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           +  +  T   Y + IN L    K+ L+D+ +    QM  +        +  ++    K G
Sbjct: 105 QKGYCHTFDVYYVFINKLGAIGKFKLIDKLLM---QMKEEGIVFRESIFMIIMKHYGKAG 161

Query: 412 MLNEALQLLHLLNGSS-CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
              +A++LL  +     C P   +Y+ +++ L    C + A  ++  M+  G+SP   T 
Sbjct: 162 QPGQAIRLLLDMRAVYLCEPTFKSYDLVLEILVTGNCPQVATNVFYDMLSKGVSPTVFTF 221

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             ++   C  ++V+ A  LL+++ K G    +  Y+ +IH L +  +V  A+++LE M  
Sbjct: 222 GIVMKALCMFNEVDSACSLLRDMTKHGCVPNSIVYQTLIHALSQKNQVSEALKLLEEMFV 281

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               PD   F+ ++  +       +A KL  +++
Sbjct: 282 MGCMPDVQTFNDVIHGLCKVNKIHDATKLVDRML 315


>gi|297839331|ref|XP_002887547.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297333388|gb|EFH63806.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 763

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 133/448 (29%), Positives = 231/448 (51%), Gaps = 1/448 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  +Q  C +G+L  A +++  +  +   PD      LI GL +  + ++A   L  +
Sbjct: 253 TYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKL 312

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD+ TYN ++ G CK G ++ A  +L     +G  PD  TY +++  +   G+ 
Sbjct: 313 VNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGET 372

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + + L KG  P +I Y  LI+ +  Q  I  A ++  +M+ +G  P++ T+N L
Sbjct: 373 NRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNIL 432

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  CK G   DA  ++  ++S+G  P+  T+N L+H   ++   +   +ILD+M +   
Sbjct: 433 VNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGV 492

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V+TYN L+NGLCK    +  + ++  MV K C P++ T+N +L +LC+   L++AL 
Sbjct: 493 DPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTFNILLESLCRYHKLDKALG 552

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NGISPDDITHRTLIWGF 477
           LL  +   S +P  +T+ TLIDG  K G ++ A  L+ +M E   +S    T+  +I  F
Sbjct: 553 LLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEEVYMVSCSTPTYNIIIHAF 612

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
                V  A  L +E+  R        YRL++ G CK+  VD+  + L  M+ + + P  
Sbjct: 613 TEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMVDGFCKTGNVDLGYKFLLEMMENGFIPSL 672

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           T    ++  +  +    EA  +  ++++
Sbjct: 673 TTLGRVINCLCVEDRVYEAAGIIHRMVQ 700



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 223/480 (46%), Gaps = 35/480 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+      G    A K+   M  R   PD +     ++   R  R   A ++L  M  
Sbjct: 115 NAIMSILVDSGYFDQAHKVYMRMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSS 174

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   + + Y  +VGG  +         L  +M  SG    + T+N +L  +   G  K+
Sbjct: 175 QGCEMNVVAYCTVVGGFYEENFKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKE 234

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                   +++G  P L TY   I+ +C++  +  A+ ++  +  +G  PD+VTYN L+ 
Sbjct: 235 CEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIY 294

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK  K+ +A + +  L++ G+EP+S TYNTL+      G     ++IL         P
Sbjct: 295 GLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERILVNAVFNGFVP 354

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             FTY  LI+GLC  G  +RA+  FN+ + K  +P+++ YNT++  L  +G++ EA QL 
Sbjct: 355 DEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQGLILEAAQLA 414

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGC--------------------------------- 447
             ++     P + T+N L++GL K GC                                 
Sbjct: 415 SEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTFNILIHGYSTQ 474

Query: 448 --MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             ME A+ +   MM+NG+ PD  T+ +L+ G C+  + E+ ++  K + ++G       +
Sbjct: 475 LKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVEKGCAPNLFTF 534

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +++  LC+  K+D A+ +LE M +    PD   F T++     +G  + AY L++K+ E
Sbjct: 535 NILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDGAYTLFRKMEE 594



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 121/412 (29%), Positives = 215/412 (52%), Gaps = 7/412 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+  L +   +++  K+L  ++  G +P+  TYN  + GLC++G++ +A+ ++  +   G
Sbjct: 222 LLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGLCQKGELDAAVRMVGRLIDQG 281

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +PDV+TYN ++  +  N KF++A  +    + +G  P   TY  LI   CK   +  A 
Sbjct: 282 PKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAE 341

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L +    G  PD  TY SL++  C +G+ + A+ + N  L +G++PN I YNTL+  L
Sbjct: 342 RILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGL 401

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            ++G      ++   M+E    P V T+NIL+NGLCK G V  A      M+SK   PDI
Sbjct: 402 SNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDI 461

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            T+N ++     +  +  AL++L ++  +   P + TYN+L++GL K    E  M  Y  
Sbjct: 462 FTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKT 521

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+E G +P+  T   L+   CR  ++++A+ LL+E+  +        +  +I G CK+  
Sbjct: 522 MVEKGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGD 581

Query: 518 VDMAIQVL----ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +D A  +     E+ + S   P    ++ I+    +      A KL+Q++++
Sbjct: 582 LDGAYTLFRKMEEVYMVSCSTP---TYNIIIHAFTEKLNVTMAEKLFQEMVD 630



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/436 (28%), Positives = 219/436 (50%), Gaps = 3/436 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C   K  +A   +  +      PD      LI G  +   ++ A ++L
Sbjct: 285 DVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDSFTYNTLIAGYCKGGMVQLAERIL 344

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              V +G VPD  TY  ++ GLC  G+   A+AL +E    G +P+VI YNT+++ + + 
Sbjct: 345 VNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNEALGKGIKPNVILYNTLIKGLSNQ 404

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A     +   KG  P + T+ IL+  +CK   ++ A  ++  M  +G  PDI T+
Sbjct: 405 GLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGCVSDADGLVKVMISKGYFPDIFTF 464

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++    Q K ++A+ +++ ++  G++P+  TYN+LL+ L     ++ V +    M E
Sbjct: 465 NILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNSLLNGLCKTSKYEDVMETYKTMVE 524

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P +FT+NIL+  LC+Y  +D+A+    +M +K+  PD VT+ T++   CK G L+ 
Sbjct: 525 KGCAPNLFTFNILLESLCRYHKLDKALGLLEEMKNKSVNPDAVTFGTLIDGFCKNGDLDG 584

Query: 416 ALQLLHLLNGSSCSPCLI-TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           A  L   +       C   TYN +I    +K  +  A  L+ +M++  + PD  T+R ++
Sbjct: 585 AYTLFRKMEEVYMVSCSTPTYNIIIHAFTEKLNVTMAEKLFQEMVDRCLGPDGYTYRLMV 644

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            GFC+   V+     L E+ + G     +    VI+ LC   +V  A  ++  M+     
Sbjct: 645 DGFCKTGNVDLGYKFLLEMMENGFIPSLTTLGRVINCLCVEDRVYEAAGIIHRMVQKGLV 704

Query: 535 PD--DTVFSTIVKKVA 548
           P+  +T+F    K+VA
Sbjct: 705 PEAVNTIFDHDKKEVA 720



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 218/443 (49%), Gaps = 2/443 (0%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRG-LIRIDRIEKASKVLQIMVMSG 182
           ++N+  +GK+ +A  + + M   +  P   F  N I   L+     ++A KV   M   G
Sbjct: 83  MKNYGRKGKVQEAVNVFERMDFYDCEPTV-FSYNAIMSILVDSGYFDQAHKVYMRMRDRG 141

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  ++ + +   C+  +  +A+ LL+ MS  GCE +V+ Y T++   ++     +  
Sbjct: 142 ITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEENFKDEGY 201

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +   L  G    L T+  L+  +CK+  +    ++LD +   G  P++ TYN  +   
Sbjct: 202 ELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYNFFIQGL 261

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C++G+ D AV ++  L+ +G +P+ +TYN L++ L     +   +  L  +      P  
Sbjct: 262 CQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLVNEGLEPDS 321

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FTYN LI G CK G+V  A       V     PD  TY +++  LC EG  N AL L + 
Sbjct: 322 FTYNTLIAGYCKGGMVQLAERILVNAVFNGFVPDEFTYRSLIDGLCHEGETNRALALFNE 381

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
             G    P +I YNTLI GL+ +G + +A  L  +M E G+ P+  T   L+ G C+   
Sbjct: 382 ALGKGIKPNVILYNTLIKGLSNQGLILEAAQLASEMSEKGLIPEVQTFNILVNGLCKMGC 441

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V +A  L+K +  +G       + ++IHG     K++ A+++L++M+ +   PD   +++
Sbjct: 442 VSDADGLVKVMISKGYFPDIFTFNILIHGYSTQLKMENALEILDVMMDNGVDPDVYTYNS 501

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++  +      E+  + ++ ++E
Sbjct: 502 LLNGLCKTSKYEDVMETYKTMVE 524



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 143/298 (47%), Gaps = 14/298 (4%)

Query: 275 RAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYD--DAVLV-----INNLLSRGMEPN 326
           +A+E+ + M  E G    + TY S++      GK++  + VLV     + N +  G+   
Sbjct: 22  KALEMFNSMRKEDGFKHTLSTYRSIIEKLGLYGKFEAMEEVLVDMRQNVGNHMLEGV--- 78

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
              Y   + + G +G       + + M+     PTVF+YN +++ L   G  D+A   + 
Sbjct: 79  ---YVGAMKNYGRKGKVQEAVNVFERMDFYDCEPTVFSYNAIMSILVDSGYFDQAHKVYM 135

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M  +   PD+ ++   + + C+    + AL+LL+ ++   C   ++ Y T++ G  ++ 
Sbjct: 136 RMRDRGITPDVYSFTIRMKSFCRTSRPHAALRLLNNMSSQGCEMNVVAYCTVVGGFYEEN 195

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
             ++   L+G+M+ +G+S    T   L+   C+   V+E   LL ++ KRG       Y 
Sbjct: 196 FKDEGYELFGKMLASGVSLCLSTFNKLLHVLCKKGDVKECEKLLDKVIKRGVLPNLFTYN 255

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             I GLC+  ++D A++++  +I    KPD   ++ ++  +  +   +EA     KL+
Sbjct: 256 FFIQGLCQKGELDAAVRMVGRLIDQGPKPDVVTYNYLIYGLCKNSKFQEAEVYLGKLV 313


>gi|356562834|ref|XP_003549673.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g74580-like [Glycine max]
          Length = 747

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 141/476 (29%), Positives = 238/476 (50%), Gaps = 49/476 (10%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGL---------IRIDRIEK 170
           NK++   C +G + ++ +L+  + +R   P+ F F I  ++GL         +R  R+ +
Sbjct: 220 NKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTFNI-FVQGLCREGALDRAVRNSRVVE 278

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A + L+ MV  G  PD +TYN ++ G CK+G ++ A  +L +    G +PD  TY +++ 
Sbjct: 279 AEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLIN 338

Query: 231 TMFDNGKFKQAIGFWKDQLRKG-----------------------------------CPP 255
               +G   +A+  +KD L KG                                   C P
Sbjct: 339 GFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLP 398

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            + TY ++I  +CK   ++ A  ++DD   +GC PDI TYN+L++  CKQ K D A  ++
Sbjct: 399 NIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMV 458

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           N + S+GM P+ ITYNTLL+ L   G  + V +I   M E   +P + TYNI+++ LCK 
Sbjct: 459 NRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKA 518

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS-SCSPCLIT 434
             V+ A++   +M SK  +PD+V++ T+    CK G ++ A QL   +           T
Sbjct: 519 KKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEKQYDVCHTTAT 578

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           YN ++   +++  M  AM L+  M  +G  PD+ T+R +I GFC+   + +    L E  
Sbjct: 579 YNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENM 638

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD--DTVFSTIVKKVA 548
           ++      + +  V++ LC   KV  A+ ++ LM+     P+  +T+F    K VA
Sbjct: 639 EKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETVNTIFEADKKVVA 694



 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/455 (29%), Positives = 221/455 (48%), Gaps = 10/455 (2%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G+   A +L D M  R   PD      L+  L +   + ++ ++L  ++  G  P+  T+
Sbjct: 195 GEHDHARELFDEMLARCLCPDVVAFNKLVHVLCKKGLVFESERLLGKVLKRGVCPNLFTF 254

Query: 191 NMMVGGLCKRGQIRSAI---------ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           N+ V GLC+ G +  A+           L +M   G EPD +TYN+I+      G  + A
Sbjct: 255 NIFVQGLCREGALDRAVRNSRVVEAEEYLRKMVNGGFEPDDLTYNSIIDGYCKKGMVQDA 314

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
               KD + KG  P   TY  LI   CK     RA+ V  D   +G  P IV YN+L+  
Sbjct: 315 NRVLKDAVFKGFKPDEFTYCSLINGFCKDGDPDRAMAVFKDGLGKGLRPSIVLYNTLIKG 374

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             +QG    A+ ++N +   G  PN  TYN +++ L   GC      ++D        P 
Sbjct: 375 LSQQGLILPALQLMNEMAENGCLPNIWTYNLVINGLCKMGCVSDASHLVDDAIAKGCPPD 434

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           +FTYN LI+G CK   +D A    N+M S+   PD++TYNT+L  LCK G   E +++  
Sbjct: 435 IFTYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFK 494

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +    C+P +ITYN ++D L K   + +A+ L G+M   G+ PD ++  TL  GFC+  
Sbjct: 495 AMEEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIG 554

Query: 482 QVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++ A  L + + K+ +    +A Y +++    +   ++MA+++  +M +S   PD+  +
Sbjct: 555 DIDGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTY 614

Query: 541 STIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             ++      G   + YK   + +E +     TT 
Sbjct: 615 RVVIDGFCKMGNITQGYKFLLENMEKRFIPSLTTF 649



 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 141/520 (27%), Positives = 239/520 (45%), Gaps = 52/520 (10%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQ--------NFCSRGKLTDASKLIDIMARRN 147
           + K  H       +    E  E  NN +L+        N+  +GK+ +A    + M   N
Sbjct: 47  VQKLGHHGEFEEMEKLLSEMRENVNNALLEGAYIEAMKNYGRKGKVQEAVDTFERMDFYN 106

Query: 148 QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI 207
             P  H    ++  L+      +A KV   M   G   D  TY + +   CK  +  +A+
Sbjct: 107 CDPSVHSHNAIMNILVEFGYHNQAHKVYMRMRDRGVQSDVYTYTIRIKSFCKTARPYAAL 166

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL------------------ 249
            LL  M   GC+ + + Y T++  ++D+G+   A   + + L                  
Sbjct: 167 RLLRNMPELGCDSNAVAYCTVVAGLYDSGEHDHARELFDEMLARCLCPDVVAFNKLVHVL 226

Query: 250 -----------------RKGCPPYLITYTILIEQVCKQCGIARAI---------EVLDDM 283
                            ++G  P L T+ I ++ +C++  + RA+         E L  M
Sbjct: 227 CKKGLVFESERLLGKVLKRGVCPNLFTFNIFVQGLCREGALDRAVRNSRVVEAEEYLRKM 286

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G  PD +TYNS+++  CK+G   DA  V+ + + +G +P+  TY +L++     G  
Sbjct: 287 VNGGFEPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYCSLINGFCKDGDP 346

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           D    +          P++  YN LI GL + GL+  A+   N+M    C P+I TYN V
Sbjct: 347 DRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNLV 406

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +  LCK G +++A  L+       C P + TYNTLIDG  K+  ++ A  +  +M   G+
Sbjct: 407 INGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQGM 466

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           +PD IT+ TL+ G C+A + EE +++ K + ++G       Y +++  LCK+KKV+ A+ 
Sbjct: 467 TPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAVD 526

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +L  M S   KPD   F T+       G  + AY+L++++
Sbjct: 527 LLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRM 566



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 123/395 (31%), Positives = 207/395 (52%), Gaps = 12/395 (3%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDR 167
           +G F E D+ T N I+  +C +G + DA++++     +   PD F +C +LI G  +   
Sbjct: 288 NGGF-EPDDLTYNSIIDGYCKKGMVQDANRVLKDAVFKGFKPDEFTYC-SLINGFCKDGD 345

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
            ++A  V +  +  G  P  + YN ++ GL ++G I  A+ L++EM+ +GC P++ TYN 
Sbjct: 346 PDRAMAVFKDGLGKGLRPSIVLYNTLIKGLSQQGLILPALQLMNEMAENGCLPNIWTYNL 405

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +   G    A     D + KGCPP + TY  LI+  CKQ  +  A E+++ M  +G
Sbjct: 406 VINGLCKMGCVSDASHLVDDAIAKGCPPDIFTYNTLIDGYCKQLKLDSATEMVNRMWSQG 465

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAV 346
            +PD++TYN+L+N  CK GK ++ + +   +  +G  PN ITYN ++ SL  ++   +AV
Sbjct: 466 MTPDVITYNTLLNGLCKAGKSEEVMEIFKAMEEKGCTPNIITYNIIVDSLCKAKKVNEAV 525

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI----VTYNT 402
           D +L  M      P V ++  L  G CK G +D A   F +M     Q D+     TYN 
Sbjct: 526 D-LLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRRMEK---QYDVCHTTATYNI 581

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++ A  ++  +N A++L  ++  S C P   TY  +IDG  K G + +      + ME  
Sbjct: 582 IVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMGNITQGYKFLLENMEKR 641

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
             P   T   ++   C  D+V EAV ++  + ++G
Sbjct: 642 FIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKG 676



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/306 (22%), Positives = 135/306 (44%), Gaps = 41/306 (13%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C + KL  A+++++ M  +   PD      L+ GL +  + E+  ++ + M
Sbjct: 437 TYNTLIDGYCKQLKLDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVMEIFKAM 496

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI--------------- 223
              G  P+ ITYN++V  LCK  ++  A+ LL EM   G +PDV+               
Sbjct: 497 EEKGCTPNIITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDI 556

Query: 224 ---------------------TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
                                TYN I+    +      A+  +      GC P   TY +
Sbjct: 557 DGAYQLFRRMEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRV 616

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           +I+  CK   I +  + L +   +   P + T+  ++N  C + K  +AV +I+ +L +G
Sbjct: 617 VIDGFCKMGNITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKG 676

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + P ++  NT+  +   +    A   +++ + +  H    +TY +L +G+    ++ + +
Sbjct: 677 IVPETV--NTIFEA--DKKVVAAPKILVEDLLKKGHI-AYYTYELLYDGIRDKKILKKRL 731

Query: 383 NSFNQM 388
            + N +
Sbjct: 732 PTVNSL 737



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 15/237 (6%)

Query: 67  IDRVNEVDQDEWSS--ESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEK------ 118
           +D   E+    WS      V+  N  L GL    KS +         F   +EK      
Sbjct: 451 LDSATEMVNRMWSQGMTPDVITYNTLLNGLCKAGKSEEVM-----EIFKAMEEKGCTPNI 505

Query: 119 -TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
            T N I+ + C   K+ +A  L+  M  +   PD      L  G  +I  I+ A ++ + 
Sbjct: 506 ITYNIIVDSLCKAKKVNEAVDLLGEMKSKGLKPDVVSFGTLFTGFCKIGDIDGAYQLFRR 565

Query: 178 MVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
           M     V   T TYN++V    ++  +  A+ L   M  SGC+PD  TY  ++      G
Sbjct: 566 MEKQYDVCHTTATYNIIVSAFSEQLNMNMAMKLFSVMKNSGCDPDNYTYRVVIDGFCKMG 625

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              Q   F  + + K   P L T+  ++  +C +  +  A+ ++  M  +G  P+ V
Sbjct: 626 NITQGYKFLLENMEKRFIPSLTTFGRVLNCLCVKDKVHEAVGIIHLMLQKGIVPETV 682


>gi|11994279|dbj|BAB01462.1| unnamed protein product [Arabidopsis thaliana]
          Length = 648

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 233/453 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E+D  T   ++  +C + KL  A  ++    +    PD      L+ G     R+ +A 
Sbjct: 130 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 189

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV     PD +T + ++ GLC +G++  A+ L+D M   G +PD +TY  +L  +
Sbjct: 190 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 249

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G    A+  ++    +     ++ Y+I+I+ +CK      A+ + ++M ++G   D+
Sbjct: 250 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 309

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY+SL+   C  GK+DD   ++  ++ R + P+ +T++ L+      G      ++ + 
Sbjct: 310 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 369

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M     +P   TYN LI+G CK   +  A   F+ MVSK C+PDIVTY+ ++ + CK   
Sbjct: 370 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 429

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +++ ++L   ++     P  ITYNTL+ G  + G +  A  L+ +M+  G+ P  +T+  
Sbjct: 430 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 489

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C   ++ +A+++ +++ K    +    Y ++IHG+C + KVD A  +   +    
Sbjct: 490 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 549

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KPD   ++ ++  +   G   EA  L++K+ E
Sbjct: 550 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 582



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 220/432 (50%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + ++  FC  G++++A  L+D M    Q PD      LI GL    R+ +A  
Sbjct: 166 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 225

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  PD +TY  ++  LCK G    A+ L  +M     +  V+ Y+ ++ ++ 
Sbjct: 226 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 285

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +G F  A+  + +   KG    ++TY+ LI  +C         ++L +M      PD+V
Sbjct: 286 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 345

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+++L++   K+GK  +A  + N +++RG+ P++ITYN+L+       C    +++ D+M
Sbjct: 346 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 405

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P + TY+ILIN  CK   VD  +  F ++ SK   P+ +TYNT++   C+ G L
Sbjct: 406 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 465

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           N A +L   +      P ++TY  L+DGL   G + KA+ ++ +M ++ ++     +  +
Sbjct: 466 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 525

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C A +V++A  L   +  +G K     Y ++I GLCK   +  A  +   M     
Sbjct: 526 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 585

Query: 534 KPDDTVFSTIVK 545
            PDD  ++ +++
Sbjct: 586 TPDDFTYNILIR 597



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 201/398 (50%), Gaps = 2/398 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKV 174
           DE T   +L   C  G    A  L   M  RN +     + I +I  L +    + A  +
Sbjct: 238 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI-VIDSLCKDGSFDDALSL 296

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              M M G   D +TY+ ++GGLC  G+      +L EM      PDV+T++ ++     
Sbjct: 297 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 356

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK  +A   + + + +G  P  ITY  LI+  CK+  +  A ++ D M  +GC PDIVT
Sbjct: 357 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 416

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ L+N  CK  + DD + +   + S+G+ PN+ITYNTL+      G  +A  ++   M 
Sbjct: 417 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 476

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P+V TY IL++GLC  G +++A+  F +M        I  YN ++  +C    ++
Sbjct: 477 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 536

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A  L   L+     P ++TYN +I GL KKG + +A +L+ +M E+G +PDD T+  LI
Sbjct: 537 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 596

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
                   +  +V+L++E+   G    +S  ++VI  L
Sbjct: 597 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 634



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 217/435 (49%), Gaps = 6/435 (1%)

Query: 132 KLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           K+ DA  L + M +   +P   DF+    L   + R  + +      + M ++G   D  
Sbjct: 79  KVNDAIDLFESMIQSRPLPTPIDFN---RLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 135

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T  +M+   C++ ++  A ++L      G EPD IT++T++      G+  +A+      
Sbjct: 136 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 195

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +     P L+T + LI  +C +  ++ A+ ++D M   G  PD VTY  ++N  CK G  
Sbjct: 196 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 255

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             A+ +   +  R ++ + + Y+ ++ SL   G +D    + + M        V TY+ L
Sbjct: 256 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 315

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I GLC  G  D       +M+ +N  PD+VT++ ++    KEG L EA +L + +     
Sbjct: 316 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 375

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P  ITYN+LIDG  K+ C+ +A  ++  M+  G  PD +T+  LI  +C+A +V++ + 
Sbjct: 376 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 435

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L +EI  +G       Y  ++ G C+S K++ A ++ + M+S    P    +  ++  + 
Sbjct: 436 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 495

Query: 549 DDGMTEEAYKLWQKL 563
           D+G   +A ++++K+
Sbjct: 496 DNGELNKALEIFEKM 510



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 158/333 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T + ++   C+ GK  D +K++  M  RN IPD      LI   ++  ++ +A 
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 364

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M+  G  PDTITYN ++ G CK   +  A  + D M   GCEPD++TY+ ++ + 
Sbjct: 365 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 424

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +    +  +++   KG  P  ITY  L+   C+   +  A E+  +M   G  P +
Sbjct: 425 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 484

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  L++  C  G+ + A+ +   +    M      YN ++H + +    D    +   
Sbjct: 485 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 544

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +++    P V TYN++I GLCK G +  A   F +M    C PD  TYN ++ A      
Sbjct: 545 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 604

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           L  +++L+  +     S    T   +ID L+ +
Sbjct: 605 LISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 637



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 156/370 (42%), Gaps = 40/370 (10%)

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           ++Y   LR    + K   AI  ++  ++    P  I +  L   V +       +     
Sbjct: 65  LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 124

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M + G   D+ T   ++N  C++ K   A  V+      G EP++IT++TL++     G 
Sbjct: 125 MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 184

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                 ++D M E    P + T + LINGLC  G V  A+   ++MV    QPD VTY  
Sbjct: 185 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 244

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           VL  LCK G    AL L   +   +    ++ Y+ +ID L K G  + A+ L+ +M   G
Sbjct: 245 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 304

Query: 463 ISPDDITHRTLIWGFC-----------------------------------RADQVEEAV 487
           I  D +T+ +LI G C                                   +  ++ EA 
Sbjct: 305 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 364

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK-- 545
           +L  E+  RG       Y  +I G CK   +  A Q+ +LM+S   +PD   +S ++   
Sbjct: 365 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 424

Query: 546 ---KVADDGM 552
              K  DDGM
Sbjct: 425 CKAKRVDDGM 434



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 48/217 (22%), Positives = 97/217 (44%), Gaps = 15/217 (6%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC--KEGM----- 412
           PT+ +   +I  L     ++R  ++F Q++ K     ++ Y+++  A    KE +     
Sbjct: 22  PTIHSLKKMIQRLIP---LNRKASNFTQILEKGTS--LLHYSSITEAKLSYKERLRNGIV 76

Query: 413 ---LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              +N+A+ L   +  S   P  I +N L   +A+    +  +     M  NGI  D  T
Sbjct: 77  DIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYT 136

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              +I  +CR  ++  A  +L    K G +     +  +++G C   +V  A+ +++ M+
Sbjct: 137 MTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMV 196

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
             + +PD    ST++  +   G   EA  L  +++E+
Sbjct: 197 EMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY 233



 Score = 42.4 bits (98), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 50/117 (42%)

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+ L+  M+++   P  I    L     R  Q +  +   K +   G +       ++I+
Sbjct: 83  AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 142

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
             C+ KK+  A  VL       Y+PD   FST+V     +G   EA  L  +++E K
Sbjct: 143 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 199


>gi|224123314|ref|XP_002319048.1| predicted protein [Populus trichocarpa]
 gi|222857424|gb|EEE94971.1| predicted protein [Populus trichocarpa]
          Length = 497

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 121/398 (30%), Positives = 212/398 (53%)

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           D    A  VL  M   G  P+ +T++ ++ GL  + +I  A+ L DEM   G EPDVITY
Sbjct: 26  DHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITY 85

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           +TI+  +   G    AI   K    KGC P ++ Y+ +I+ +CK   I  A+E L +M  
Sbjct: 86  STIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVN 145

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
            G SP++VTY+S+++  C  G+ ++A  +   ++ R + P+++T+N L+  L   G    
Sbjct: 146 RGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILE 205

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              + + M E    P V TYN L++G C    +D A   FN MV K C P + +YN ++ 
Sbjct: 206 AQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIK 265

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             CK G ++EA  LL  ++  + +P  +TY+TL+ G  + G  + A  L  +M   G+ P
Sbjct: 266 GHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLP 325

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +T+  ++ G C+   ++EA +LLK + +   +     Y ++I G+C   K++ A ++ 
Sbjct: 326 DLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELF 385

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             +     +PD   ++ ++  +   G++ EA +L++ +
Sbjct: 386 SNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDM 423



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 126/407 (30%), Positives = 210/407 (51%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+ GL    +I  A K+   MV  G  PD ITY+ ++ GLCK G    AI LL +M   G
Sbjct: 53  LLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKG 112

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+P+V+ Y+TI+ ++  +    +A+ F  + + +G  P ++TY+ ++   C       A 
Sbjct: 113 CKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEAT 172

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +   M      PD VT+N LV+   K+G   +A  V   ++ +G+EPN  TYN L+   
Sbjct: 173 SLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGY 232

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            S+   D   K+ +IM     +P+V +YNILI G CK G +D A     +M  K   PD 
Sbjct: 233 CSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDT 292

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTY+T++   C++G   +A +LL  +      P L+TY+ ++DGL K+G +++A  L   
Sbjct: 293 VTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKA 352

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M E+ I P+   +  LI G C   ++E A +L   +  +G +     Y ++I GL K   
Sbjct: 353 MQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGL 412

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            + A ++   M      P+   ++ I++    +G T  A +L ++++
Sbjct: 413 SNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMV 459



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/425 (28%), Positives = 211/425 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +L    S+ K+ DA KL D M +    PD      +I GL ++     A ++L+ M
Sbjct: 49  TFSTLLNGLSSKAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKM 108

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ + Y+ ++  LCK   I  A+  L EM   G  P+V+TY++IL    + G+ 
Sbjct: 109 EEKGCKPNVVVYSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRS 168

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +K  + +   P  +T+ IL++ + K+  I  A  V + M  +G  P++ TYN+L
Sbjct: 169 NEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNAL 228

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C Q + D+A  + N ++ +G  P+  +YN L+      G  D    +L  M+  + 
Sbjct: 229 MDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKAL 288

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   TY+ L+ G C+ G    A     +M S    PD++TY+ VL  LCK+G L+EA +
Sbjct: 289 TPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFE 348

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +  S   P +  Y  LI G+   G +E A  L+  +   GI PD +T+  +I G  
Sbjct: 349 LLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLL 408

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +     EA +L +++   G    +  Y ++I G  ++     A +++E M+   +  D +
Sbjct: 409 KGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSS 468

Query: 539 VFSTI 543
            F  +
Sbjct: 469 TFQML 473



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 191/395 (48%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + I+   C  G  T A +L+  M  +   P+      +I  L +   I +A +
Sbjct: 79  EPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTIIDSLCKDKLITEAME 138

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            L  MV  G  P+ +TY+ ++ G C  G+   A +L  +M      PD +T+N ++  + 
Sbjct: 139 FLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLS 198

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G   +A   ++  + KG  P + TY  L++  C Q  +  A ++ + M  +GC+P + 
Sbjct: 199 KEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVR 258

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN L+   CK G+ D+A  ++  +  + + P+++TY+TL+      G      K+L+ M
Sbjct: 259 SYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEM 318

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P + TY+I+++GLCK G +D A      M     +P+I  Y  ++  +C  G L
Sbjct: 319 RSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKL 378

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             A +L   L      P ++TY  +I GL K G   +A  L+  M  +G  P+  T+  +
Sbjct: 379 EAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVI 438

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           I GF R      A  L++E+  RG    +S ++++
Sbjct: 439 IQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML 473



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 108/390 (27%), Positives = 193/390 (49%), Gaps = 39/390 (10%)

Query: 213 MSVSGCEPDVITYNTILRTMF---DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           M +S   PDV T  TIL   F   ++  F  A     +  + G  P  +T++ L+  +  
Sbjct: 1   MDLSNIRPDVYTL-TILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSS 59

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
           +  I  A+++ D+M   G  PD++TY++++N  CK G    A+ ++  +  +G +PN + 
Sbjct: 60  KAKIIDAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVV 119

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y+T++ SL          + L  M     SP V TY+ +++G C  G  + A + F QMV
Sbjct: 120 YSTIIDSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMV 179

Query: 390 SKNCQPDIVTYNTVLGALCKEGM-----------------------------------LN 414
            +N  PD VT+N ++  L KEGM                                   ++
Sbjct: 180 ERNVMPDTVTFNILVDGLSKEGMILEAQCVFETMIEKGVEPNVNTYNALMDGYCSQSQMD 239

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +L +++    C+P + +YN LI G  K G +++A  L  +M    ++PD +T+ TL+
Sbjct: 240 EAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAKGLLAEMSHKALTPDTVTYSTLM 299

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            GFC+  + ++A  LL+E+   G       Y +V+ GLCK   +D A ++L+ M  S+ +
Sbjct: 300 KGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGLCKQGHLDEAFELLKAMQESKIE 359

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           P+  +++ +++ + + G  E A +L+  L 
Sbjct: 360 PNIFIYTILIQGMCNFGKLEAARELFSNLF 389



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 108/383 (28%), Positives = 176/383 (45%), Gaps = 39/383 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + IL  FC+ G+  +A+ L   M  RN +PD      L+ GL +   I +A  V + M
Sbjct: 154 TYSSILHGFCNLGRSNEATSLFKQMVERNVMPDTVTFNILVDGLSKEGMILEAQCVFETM 213

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+  TYN ++ G C + Q+  A  L + M   GC P V +YN +++    +G+ 
Sbjct: 214 IEKGVEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRI 273

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A G   +   K   P  +TY+ L++  C+      A ++L++M   G  PD++TY+ +
Sbjct: 274 DEAKGLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIV 333

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CKQG  D+A  ++  +    +EPN                                
Sbjct: 334 LDGLCKQGHLDEAFELLKAMQESKIEPN-------------------------------- 361

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              +F Y ILI G+C +G ++ A   F+ +  K  QPD+VTY  ++  L K G+ NEA +
Sbjct: 362 ---IFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDVVTYTVMISGLLKGGLSNEACE 418

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +    C P   TYN +I G  + G    A  L  +M+  G S D  T + L     
Sbjct: 419 LFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEEMVGRGFSADSSTFQML----S 474

Query: 479 RADQVEEAVDLLKEIGKRGNKMR 501
             +  +E + L      +G KM+
Sbjct: 475 DLESRDEIISLFMHGSSQGRKMK 497



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 73/256 (28%), Positives = 128/256 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +  T N ++  +CS+ ++ +A KL +IM R+   P       LI+G  +  RI++A 
Sbjct: 218 VEPNVNTYNALMDGYCSQSQMDEAQKLFNIMVRKGCAPSVRSYNILIKGHCKSGRIDEAK 277

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  M      PDT+TY+ ++ G C+ G+ + A  LL+EM   G  PD++TY+ +L  +
Sbjct: 278 GLLAEMSHKALTPDTVTYSTLMKGFCQDGRPQDAQKLLEEMRSYGLLPDLMTYSIVLDGL 337

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A    K        P +  YTILI+ +C    +  A E+  ++ ++G  PD+
Sbjct: 338 CKQGHLDEAFELLKAMQESKIEPNIFIYTILIQGMCNFGKLEAARELFSNLFVKGIQPDV 397

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  +++   K G  ++A  +  ++   G  PNS TYN ++      G      ++++ 
Sbjct: 398 VTYTVMISGLLKGGLSNEACELFRDMAVHGCLPNSCTYNVIIQGFLRNGDTSNAGRLIEE 457

Query: 353 MNEASHSPTVFTYNIL 368
           M     S    T+ +L
Sbjct: 458 MVGRGFSADSSTFQML 473



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 95/186 (51%), Gaps = 2/186 (1%)

Query: 392 NCQPDIVTYNTVLGALCKEGM--LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           N +PD+ T   ++   C       + A  +L  +      P  +T++TL++GL+ K  + 
Sbjct: 5   NIRPDVYTLTILINCFCHSNHDHFHFAFSVLGNMFKLGLQPNHVTFSTLLNGLSSKAKII 64

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A+ L+ +M++ G  PD IT+ T+I G C+      A+ LLK++ ++G K     Y  +I
Sbjct: 65  DAVKLFDEMVKMGYEPDVITYSTIINGLCKMGSTTMAIQLLKKMEEKGCKPNVVVYSTII 124

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             LCK K +  A++ L  M++    P+   +S+I+    + G + EA  L+++++E  V 
Sbjct: 125 DSLCKDKLITEAMEFLSEMVNRGISPNVVTYSSILHGFCNLGRSNEATSLFKQMVERNVM 184

Query: 570 EKGTTL 575
               T 
Sbjct: 185 PDTVTF 190


>gi|15238505|ref|NP_201359.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75180383|sp|Q9LSL9.1|PP445_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g65560
 gi|8978284|dbj|BAA98175.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737310|dbj|BAF00601.1| hypothetical protein [Arabidopsis thaliana]
 gi|332010688|gb|AED98071.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 915

 Score =  226 bits (576), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 136/450 (30%), Positives = 229/450 (50%), Gaps = 7/450 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T NK++  +C  G + +A++ +  +      PDF    +LI G  +   ++ A KV   M
Sbjct: 220 TYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEM 279

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G   + + Y  ++ GLC   +I  A+ L  +M    C P V TY  +++++  + + 
Sbjct: 280 PLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERK 339

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+   K+    G  P + TYT+LI+ +C QC   +A E+L  M  +G  P+++TYN+L
Sbjct: 340 SEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNAL 399

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN---E 355
           +N  CK+G  +DAV V+  + SR + PN+ TYN L+       C   V K + ++N   E
Sbjct: 400 INGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGY----CKSNVHKAMGVLNKMLE 455

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V TYN LI+G C+ G  D A    + M  +   PD  TY +++ +LCK   + E
Sbjct: 456 RKVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEE 515

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   L     +P ++ Y  LIDG  K G +++A ++  +M+     P+ +T   LI 
Sbjct: 516 ACDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIH 575

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C   +++EA  L +++ K G +   S   ++IH L K    D A    + M+SS  KP
Sbjct: 576 GLCADGKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKP 635

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   ++T ++    +G   +A  +  K+ E
Sbjct: 636 DAHTYTTFIQTYCREGRLLDAEDMMAKMRE 665



 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 126/443 (28%), Positives = 238/443 (53%), Gaps = 4/443 (0%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           L N  +R  L D  K + +    +++ P+ +    ++ G  ++  +E+A++ +  +V +G
Sbjct: 189 LLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIVEAG 248

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY  ++ G C+R  + SA  + +EM + GC  + + Y  ++  +    +  +A+
Sbjct: 249 LDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRIDEAM 308

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +       C P + TYT+LI+ +C     + A+ ++ +M   G  P+I TY  L++  
Sbjct: 309 DLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLVKEMEETGIKPNIHTYTVLIDSL 368

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPT 361
           C Q K++ A  ++  +L +G+ PN ITYN L++    RG   DAVD ++++M     SP 
Sbjct: 369 CSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVD-VVELMESRKLSPN 427

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TYN LI G CK   V +A+   N+M+ +   PD+VTYN+++   C+ G  + A +LL 
Sbjct: 428 TRTYNELIKGYCKSN-VHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNFDSAYRLLS 486

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           L+N     P   TY ++ID L K   +E+A  L+  + + G++P+ + +  LI G+C+A 
Sbjct: 487 LMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTALIDGYCKAG 546

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V+EA  +L+++  +     +  +  +IHGLC   K+  A  + E M+    +P  +  +
Sbjct: 547 KVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGLQPTVSTDT 606

Query: 542 TIVKKVADDGMTEEAYKLWQKLI 564
            ++ ++  DG  + AY  +Q+++
Sbjct: 607 ILIHRLLKDGDFDHAYSRFQQML 629



 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 128/439 (29%), Positives = 219/439 (49%), Gaps = 9/439 (2%)

Query: 135 DASKLIDIMARRNQIPDFHF-------CIN-LIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           DA  ++D+  + N+   F         C N L+  L R   +++  +V   M+     P+
Sbjct: 158 DALYVLDLCRKMNKDERFELKYKLIIGCYNTLLNSLARFGLVDEMKQVYMEMLEDKVCPN 217

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TYN MV G CK G +  A   + ++  +G +PD  TY +++           A   + 
Sbjct: 218 IYTYNKMVNGYCKLGNVEEANQYVSKIVEAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFN 277

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           +   KGC    + YT LI  +C    I  A+++   M  + C P + TY  L+   C   
Sbjct: 278 EMPLKGCRRNEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSE 337

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           +  +A+ ++  +   G++PN  TY  L+ SL S+  ++   ++L  M E    P V TYN
Sbjct: 338 RKSEALNLVKEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYN 397

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LING CK G+++ A++    M S+   P+  TYN ++   CK   +++A+ +L+ +   
Sbjct: 398 ALINGYCKRGMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKSN-VHKAMGVLNKMLER 456

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P ++TYN+LIDG  + G  + A  L   M + G+ PD  T+ ++I   C++ +VEEA
Sbjct: 457 KVLPDVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEA 516

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            DL   + ++G       Y  +I G CK+ KVD A  +LE M+S    P+   F+ ++  
Sbjct: 517 CDLFDSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHG 576

Query: 547 VADDGMTEEAYKLWQKLIE 565
           +  DG  +EA  L +K+++
Sbjct: 577 LCADGKLKEATLLEEKMVK 595



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/435 (28%), Positives = 211/435 (48%), Gaps = 3/435 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E     ++   C   ++ +A  L   M      P       LI+ L   +R  +A  ++
Sbjct: 287 NEVAYTHLIHGLCVARRIDEAMDLFVKMKDDECFPTVRTYTVLIKSLCGSERKSEALNLV 346

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +G  P+  TY +++  LC + +   A  LL +M   G  P+VITYN ++      
Sbjct: 347 KEMEETGIKPNIHTYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKR 406

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  + A+   +    +   P   TY  LI+  CK   + +A+ VL+ M      PD+VTY
Sbjct: 407 GMIEDAVDVVELMESRKLSPNTRTYNELIKGYCKS-NVHKAMGVLNKMLERKVLPDVVTY 465

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMN 354
           NSL++  C+ G +D A  +++ +  RG+ P+  TY +++ SL  S+   +A D + D + 
Sbjct: 466 NSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACD-LFDSLE 524

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +   +P V  Y  LI+G CK G VD A     +M+SKNC P+ +T+N ++  LC +G L 
Sbjct: 525 QKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLK 584

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA  L   +      P + T   LI  L K G  + A   + QM+ +G  PD  T+ T I
Sbjct: 585 EATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFI 644

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             +CR  ++ +A D++ ++ + G       Y  +I G     + + A  VL+ M  +  +
Sbjct: 645 QTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCE 704

Query: 535 PDDTVFSTIVKKVAD 549
           P    F +++K + +
Sbjct: 705 PSQHTFLSLIKHLLE 719



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 218/445 (48%), Gaps = 20/445 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++ + CS+ K   A +L+  M  +  +P+      LI G  +   IE A  V+++M
Sbjct: 360 TYTVLIDSLCSQCKFEKARELLGQMLEKGLMPNVITYNALINGYCKRGMIEDAVDVVELM 419

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+T TYN ++ G CK   +  A+ +L++M      PDV+TYN+++     +G F
Sbjct: 420 ESRKLSPNTRTYNELIKGYCK-SNVHKAMGVLNKMLERKVLPDVVTYNSLIDGQCRSGNF 478

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A         +G  P   TYT +I+ +CK   +  A ++ D +  +G +P++V Y +L
Sbjct: 479 DSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLFDSLEQKGVNPNVVMYTAL 538

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK D+A L++  +LS+   PNS+T+N L+H L + G       + + M +   
Sbjct: 539 IDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCADGKLKEATLLEEKMVKIGL 598

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            PTV T  ILI+ L K G  D A + F QM+S   +PD  TY T +   C+EG L +A  
Sbjct: 599 QPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTYTTFIQTYCREGRLLDAED 658

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI---- 474
           ++  +  +  SP L TY++LI G    G    A  +  +M + G  P   T  +LI    
Sbjct: 659 MMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRDTGCEPSQHTFLSLIKHLL 718

Query: 475 ---WGFCRADQVE-----------EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
              +G  +  + E             V+LL+++ +        +Y  +I G+C+   + +
Sbjct: 719 EMKYGKQKGSEPELCAMSNMMEFDTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRV 778

Query: 521 AIQVLELMISSR-YKPDDTVFSTIV 544
           A +V + M  +    P + VF+ ++
Sbjct: 779 AEKVFDHMQRNEGISPSELVFNALL 803



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/448 (23%), Positives = 203/448 (45%), Gaps = 22/448 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C  G    A +L+ +M  R  +PD     ++I  L +  R+E+A  + 
Sbjct: 461 DVVTYNSLIDGQCRSGNFDSAYRLLSLMNDRGLVPDQWTYTSMIDSLCKSKRVEEACDLF 520

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +   G  P+ + Y  ++ G CK G++  A  +L++M    C P+ +T+N ++  +  +
Sbjct: 521 DSLEQKGVNPNVVMYTALIDGYCKAGKVDEAHLMLEKMLSKNCLPNSLTFNALIHGLCAD 580

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK K+A    +  ++ G  P + T TILI ++ K      A      M   G  PD  TY
Sbjct: 581 GKLKEATLLEEKMVKIGLQPTVSTDTILIHRLLKDGDFDHAYSRFQQMLSSGTKPDAHTY 640

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            + +   C++G+  DA  ++  +   G+ P+  TY++L+   G  G  +    +L  M +
Sbjct: 641 TTFIQTYCREGRLLDAEDMMAKMRENGVSPDLFTYSSLIKGYGDLGQTNFAFDVLKRMRD 700

Query: 356 ASHSPTVFTYNILINGLC--KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
               P+  T+  LI  L   KYG              K  +P++   + ++         
Sbjct: 701 TGCEPSQHTFLSLIKHLLEMKYG------------KQKGSEPELCAMSNMME-------F 741

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRT 472
           +  ++LL  +   S +P   +Y  LI G+ + G +  A  ++  M  N GISP ++    
Sbjct: 742 DTVVELLEKMVEHSVTPNAKSYEKLILGICEVGNLRVAEKVFDHMQRNEGISPSELVFNA 801

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+   C+  +  EA  ++ ++   G+  +  + +++I GL K  + +    V + ++   
Sbjct: 802 LLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQCG 861

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           Y  D+  +  I+  V   G+ E  Y+L+
Sbjct: 862 YYEDELAWKIIIDGVGKQGLVEAFYELF 889



 Score = 60.5 bits (145), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 71/135 (52%)

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           YNTL++ LA+ G +++   +Y +M+E+ + P+  T+  ++ G+C+   VEEA   + +I 
Sbjct: 186 YNTLLNSLARFGLVDEMKQVYMEMLEDKVCPNIYTYNKMVNGYCKLGNVEEANQYVSKIV 245

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           + G       Y  +I G C+ K +D A +V   M     + ++  ++ ++  +      +
Sbjct: 246 EAGLDPDFFTYTSLIMGYCQRKDLDSAFKVFNEMPLKGCRRNEVAYTHLIHGLCVARRID 305

Query: 555 EAYKLWQKLIEWKVF 569
           EA  L+ K+ + + F
Sbjct: 306 EAMDLFVKMKDDECF 320



 Score = 50.4 bits (119), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 28/110 (25%), Positives = 54/110 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L   C   K  +A+K++D M     +P    C  LI GL +    E+ + V Q ++ 
Sbjct: 800 NALLSCCCKLKKHNEAAKVVDDMICVGHLPQLESCKVLICGLYKKGEKERGTSVFQNLLQ 859

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
            G   D + + +++ G+ K+G + +   L + M  +GC+    TY+ ++ 
Sbjct: 860 CGYYEDELAWKIIIDGVGKQGLVEAFYELFNVMEKNGCKFSSQTYSLLIE 909


>gi|255556189|ref|XP_002519129.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541792|gb|EEF43340.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 643

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 128/396 (32%), Positives = 205/396 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GKL  A   I  M      P+      +I G     R+E A  VL IM
Sbjct: 238 TFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLDIM 297

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD+ TY  ++ G+CK G++  A  +L++M   G  P  +TYNT++    + G  
Sbjct: 298 KNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKGDL 357

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A G+  + +R+   P + TY +LI  +  +  +  A  ++ DM   G  PD +TYN L
Sbjct: 358 VKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYNIL 417

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C+ G    A  + + ++S+G++P  +TY +L++ L  R    A D + + +     
Sbjct: 418 INGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIREGA 477

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP +  +N LI+G C  G +DRA     +M  +N  PD VTYNT++   C+EG + EA +
Sbjct: 478 SPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEARE 537

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +      P  I+YNTLI G +K+G +  A  +  +M+  G +P  +T+  LI G C
Sbjct: 538 LLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQGLC 597

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +  Q + A +LLKE+  +G    +S Y  +I G+ K
Sbjct: 598 KNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGK 633



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 129/451 (28%), Positives = 228/451 (50%), Gaps = 2/451 (0%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C   +  DA +  D+M  +  +P       ++   +++++ E    VL   +    +  T
Sbjct: 177 CELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVW-VLYAEMFRLKIKST 235

Query: 188 I-TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           + T+N+M+  LCK G+++ A   +  M   G +P+V+TYNT++      G+ + A     
Sbjct: 236 VYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEGARMVLD 295

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
               +G  P   TY  LI  +CK   +  A  +L+ M   G  P  VTYN+L++  C +G
Sbjct: 296 IMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLIDGYCNKG 355

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
               A    + ++ R + P   TYN L+H+L   G  D  D ++  M ++   P   TYN
Sbjct: 356 DLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVPDSITYN 415

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           ILING C+ G   +A N  ++M+SK  QP +VTY +++  L K   +  A  L   +   
Sbjct: 416 ILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLFEKIIRE 475

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
             SP LI +N LIDG    G +++A  L  +M +  I PD++T+ TL+ G CR  +VEEA
Sbjct: 476 GASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCREGKVEEA 535

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            +LLKE+ +RG +  + +Y  +I G  K   ++ A  + + M+S  + P    ++ +++ 
Sbjct: 536 RELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTYNALIQG 595

Query: 547 VADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           +  +   + A +L ++++   +    +T  +
Sbjct: 596 LCKNQQGDLAEELLKEMVSKGITPDDSTYFS 626



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 124/371 (33%), Positives = 193/371 (52%), Gaps = 2/371 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +CSRG++  A  ++DIM  R   PD +   +LI G+ +  ++E+AS +L+ M
Sbjct: 273 TYNTVIHGYCSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKM 332

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +P  +TYN ++ G C +G +  A    DEM      P V TYN ++  +F  GK 
Sbjct: 333 KEIGLLPTAVTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKM 392

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR-AIEVLDDMAIEGCSPDIVTYNS 297
            +A G  KD    G  P  ITY ILI   C+ CG A+ A  + D+M  +G  P +VTY S
Sbjct: 393 DEADGMIKDMGDSGIVPDSITYNILINGYCR-CGNAKKAFNLHDEMISKGIQPTLVTYTS 451

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+    K+ +   A  +   ++  G  P+ I +N L+    + G  D    +L  M++ +
Sbjct: 452 LIYVLSKRNRMKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRN 511

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TYN L+ G C+ G V+ A     +M  +  +PD ++YNT++    K G +N+A 
Sbjct: 512 IVPDEVTYNTLMQGRCREGKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAF 571

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +   +     +P L+TYN LI GL K    + A  L  +M+  GI+PDD T+ +LI G 
Sbjct: 572 TIRDEMLSIGFNPTLLTYNALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGI 631

Query: 478 CRADQVEEAVD 488
            + D   EA D
Sbjct: 632 GKVDDSSEASD 642



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 121/411 (29%), Positives = 211/411 (51%), Gaps = 3/411 (0%)

Query: 146 RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRS 205
           ++ +  F+  IN+   L +  +++KA   +  M   G  P+ +TYN ++ G C RG++  
Sbjct: 233 KSTVYTFNIMINV---LCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGRVEG 289

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A  +LD M   G EPD  TY +++  M   GK ++A G  +     G  P  +TY  LI+
Sbjct: 290 ARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNTLID 349

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             C +  + +A    D+M      P + TYN L++    +GK D+A  +I ++   G+ P
Sbjct: 350 GYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSGIVP 409

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           +SITYN L++     G       + D M      PT+ TY  LI  L K   +  A + F
Sbjct: 410 DSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAADDLF 469

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            +++ +   PD++ +N ++   C  G L+ A  LL  ++  +  P  +TYNTL+ G  ++
Sbjct: 470 EKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNTLMQGRCRE 529

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G +E+A  L  +M   GI PD I++ TLI G+ +   + +A  +  E+   G       Y
Sbjct: 530 GKVEEARELLKEMKRRGIRPDHISYNTLISGYSKRGDINDAFTIRDEMLSIGFNPTLLTY 589

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
             +I GLCK+++ D+A ++L+ M+S    PDD+ + ++++ +     + EA
Sbjct: 590 NALIQGLCKNQQGDLAEELLKEMVSKGITPDDSTYFSLIEGIGKVDDSSEA 640



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 106/381 (27%), Positives = 199/381 (52%)

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
           G   +I ++M++   C+  +   A    D M   G  P + T+N +L       + +   
Sbjct: 162 GTKSSIVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVW 221

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +  R      + T+ I+I  +CK+  + +A + +  M   G  P++VTYN++++  
Sbjct: 222 VLYAEMFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGY 281

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +G+ + A +V++ + +RG+EP+S TY +L+  +   G  +    IL+ M E    PT 
Sbjct: 282 CSRGRVEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTA 341

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN LI+G C  G + +A    ++MV +   P + TYN ++ AL  EG ++EA  ++  
Sbjct: 342 VTYNTLIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKD 401

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  S   P  ITYN LI+G  + G  +KA  L+ +M+  GI P  +T+ +LI+   + ++
Sbjct: 402 MGDSGIVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNR 461

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++ A DL ++I + G       +  +I G C +  +D A  +L+ M      PD+  ++T
Sbjct: 462 MKAADDLFEKIIREGASPDLIMFNALIDGHCANGNLDRAFALLKEMDKRNIVPDEVTYNT 521

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           +++    +G  EEA +L +++
Sbjct: 522 LMQGRCREGKVEEARELLKEM 542



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 79/307 (25%), Positives = 144/307 (46%)

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           I + +LI   C+      A E  D M  +G  P I T+N++++   K  + +   ++   
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +    ++    T+N +++ L   G        +  M      P V TYN +I+G C  G 
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           V+ A    + M ++  +PD  TY +++  +CK G L EA  +L  +      P  +TYNT
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVTYNT 346

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LIDG   KG + KA     +M+   I P   T+  LI       +++EA  ++K++G  G
Sbjct: 347 LIDGYCNKGDLVKAFGYRDEMVRRAILPTVSTYNLLIHALFLEGKMDEADGMIKDMGDSG 406

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
               +  Y ++I+G C+      A  + + MIS   +P    +++++  ++     + A 
Sbjct: 407 IVPDSITYNILINGYCRCGNAKKAFNLHDEMISKGIQPTLVTYTSLIYVLSKRNRMKAAD 466

Query: 558 KLWQKLI 564
            L++K+I
Sbjct: 467 DLFEKII 473



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 79/177 (44%)

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           + ++ ++ A C+    ++A +   ++      P + T+N ++    K    E   VLY +
Sbjct: 167 IVFDMLIRACCELKRGDDAFECFDMMKEKGVVPKIETFNAMLSLFLKLNQTETVWVLYAE 226

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M    I     T   +I   C+  ++++A D +  +   G K     Y  VIHG C   +
Sbjct: 227 MFRLKIKSTVYTFNIMINVLCKEGKLKKAKDFIGSMENLGVKPNVVTYNTVIHGYCSRGR 286

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           V+ A  VL++M +   +PD   + +++  +   G  EEA  + +K+ E  +     T
Sbjct: 287 VEGARMVLDIMKNRGVEPDSYTYGSLISGMCKGGKLEEASGILEKMKEIGLLPTAVT 343


>gi|15228763|ref|NP_188886.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75223290|sp|Q6NQ83.1|PP247_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g22470, mitochondrial; Flags: Precursor
 gi|34365775|gb|AAQ65199.1| At3g22470 [Arabidopsis thaliana]
 gi|51968798|dbj|BAD43091.1| hypothetical protein [Arabidopsis thaliana]
 gi|332643122|gb|AEE76643.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 619

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 233/453 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E+D  T   ++  +C + KL  A  ++    +    PD      L+ G     R+ +A 
Sbjct: 101 IEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAV 160

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV     PD +T + ++ GLC +G++  A+ L+D M   G +PD +TY  +L  +
Sbjct: 161 ALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRL 220

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G    A+  ++    +     ++ Y+I+I+ +CK      A+ + ++M ++G   D+
Sbjct: 221 CKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADV 280

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY+SL+   C  GK+DD   ++  ++ R + P+ +T++ L+      G      ++ + 
Sbjct: 281 VTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNE 340

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M     +P   TYN LI+G CK   +  A   F+ MVSK C+PDIVTY+ ++ + CK   
Sbjct: 341 MITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKR 400

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +++ ++L   ++     P  ITYNTL+ G  + G +  A  L+ +M+  G+ P  +T+  
Sbjct: 401 VDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGI 460

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C   ++ +A+++ +++ K    +    Y ++IHG+C + KVD A  +   +    
Sbjct: 461 LLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCSLSDKG 520

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KPD   ++ ++  +   G   EA  L++K+ E
Sbjct: 521 VKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKE 553



 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 220/432 (50%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + ++  FC  G++++A  L+D M    Q PD      LI GL    R+ +A  
Sbjct: 137 EPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALV 196

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  PD +TY  ++  LCK G    A+ L  +M     +  V+ Y+ ++ ++ 
Sbjct: 197 LIDRMVEYGFQPDEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLC 256

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +G F  A+  + +   KG    ++TY+ LI  +C         ++L +M      PD+V
Sbjct: 257 KDGSFDDALSLFNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVV 316

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+++L++   K+GK  +A  + N +++RG+ P++ITYN+L+       C    +++ D+M
Sbjct: 317 TFSALIDVFVKEGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLM 376

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P + TY+ILIN  CK   VD  +  F ++ SK   P+ +TYNT++   C+ G L
Sbjct: 377 VSKGCEPDIVTYSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKL 436

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           N A +L   +      P ++TY  L+DGL   G + KA+ ++ +M ++ ++     +  +
Sbjct: 437 NAAKELFQEMVSRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNII 496

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C A +V++A  L   +  +G K     Y ++I GLCK   +  A  +   M     
Sbjct: 497 IHGMCNASKVDDAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGC 556

Query: 534 KPDDTVFSTIVK 545
            PDD  ++ +++
Sbjct: 557 TPDDFTYNILIR 568



 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 124/398 (31%), Positives = 201/398 (50%), Gaps = 2/398 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKV 174
           DE T   +L   C  G    A  L   M  RN +     + I +I  L +    + A  +
Sbjct: 209 DEVTYGPVLNRLCKSGNSALALDLFRKMEERNIKASVVQYSI-VIDSLCKDGSFDDALSL 267

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              M M G   D +TY+ ++GGLC  G+      +L EM      PDV+T++ ++     
Sbjct: 268 FNEMEMKGIKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVK 327

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK  +A   + + + +G  P  ITY  LI+  CK+  +  A ++ D M  +GC PDIVT
Sbjct: 328 EGKLLEAKELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVT 387

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ L+N  CK  + DD + +   + S+G+ PN+ITYNTL+      G  +A  ++   M 
Sbjct: 388 YSILINSYCKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMV 447

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P+V TY IL++GLC  G +++A+  F +M        I  YN ++  +C    ++
Sbjct: 448 SRGVPPSVVTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVD 507

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A  L   L+     P ++TYN +I GL KKG + +A +L+ +M E+G +PDD T+  LI
Sbjct: 508 DAWSLFCSLSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILI 567

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
                   +  +V+L++E+   G    +S  ++VI  L
Sbjct: 568 RAHLGGSGLISSVELIEEMKVCGFSADSSTIKMVIDML 605



 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 217/435 (49%), Gaps = 6/435 (1%)

Query: 132 KLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           K+ DA  L + M +   +P   DF+    L   + R  + +      + M ++G   D  
Sbjct: 50  KVNDAIDLFESMIQSRPLPTPIDFN---RLCSAVARTKQYDLVLGFCKGMELNGIEHDMY 106

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T  +M+   C++ ++  A ++L      G EPD IT++T++      G+  +A+      
Sbjct: 107 TMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRM 166

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +     P L+T + LI  +C +  ++ A+ ++D M   G  PD VTY  ++N  CK G  
Sbjct: 167 VEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGPVLNRLCKSGNS 226

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             A+ +   +  R ++ + + Y+ ++ SL   G +D    + + M        V TY+ L
Sbjct: 227 ALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKGIKADVVTYSSL 286

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I GLC  G  D       +M+ +N  PD+VT++ ++    KEG L EA +L + +     
Sbjct: 287 IGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAKELYNEMITRGI 346

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P  ITYN+LIDG  K+ C+ +A  ++  M+  G  PD +T+  LI  +C+A +V++ + 
Sbjct: 347 APDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSYCKAKRVDDGMR 406

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L +EI  +G       Y  ++ G C+S K++ A ++ + M+S    P    +  ++  + 
Sbjct: 407 LFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSVVTYGILLDGLC 466

Query: 549 DDGMTEEAYKLWQKL 563
           D+G   +A ++++K+
Sbjct: 467 DNGELNKALEIFEKM 481



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/333 (27%), Positives = 158/333 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T + ++   C+ GK  D +K++  M  RN IPD      LI   ++  ++ +A 
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M+  G  PDTITYN ++ G CK   +  A  + D M   GCEPD++TY+ ++ + 
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +    +  +++   KG  P  ITY  L+   C+   +  A E+  +M   G  P +
Sbjct: 396 CKAKRVDDGMRLFREISSKGLIPNTITYNTLVLGFCQSGKLNAAKELFQEMVSRGVPPSV 455

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  L++  C  G+ + A+ +   +    M      YN ++H + +    D    +   
Sbjct: 456 VTYGILLDGLCDNGELNKALEIFEKMQKSRMTLGIGIYNIIIHGMCNASKVDDAWSLFCS 515

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +++    P V TYN++I GLCK G +  A   F +M    C PD  TYN ++ A      
Sbjct: 516 LSDKGVKPDVVTYNVMIGGLCKKGSLSEADMLFRKMKEDGCTPDDFTYNILIRAHLGGSG 575

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           L  +++L+  +     S    T   +ID L+ +
Sbjct: 576 LISSVELIEEMKVCGFSADSSTIKMVIDMLSDR 608



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 99/370 (26%), Positives = 156/370 (42%), Gaps = 40/370 (10%)

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           ++Y   LR    + K   AI  ++  ++    P  I +  L   V +       +     
Sbjct: 36  LSYKERLRNGIVDIKVNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKG 95

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M + G   D+ T   ++N  C++ K   A  V+      G EP++IT++TL++     G 
Sbjct: 96  MELNGIEHDMYTMTIMINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGR 155

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                 ++D M E    P + T + LINGLC  G V  A+   ++MV    QPD VTY  
Sbjct: 156 VSEAVALVDRMVEMKQRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEYGFQPDEVTYGP 215

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           VL  LCK G    AL L   +   +    ++ Y+ +ID L K G  + A+ L+ +M   G
Sbjct: 216 VLNRLCKSGNSALALDLFRKMEERNIKASVVQYSIVIDSLCKDGSFDDALSLFNEMEMKG 275

Query: 463 ISPDDITHRTLIWGFC-----------------------------------RADQVEEAV 487
           I  D +T+ +LI G C                                   +  ++ EA 
Sbjct: 276 IKADVVTYSSLIGGLCNDGKWDDGAKMLREMIGRNIIPDVVTFSALIDVFVKEGKLLEAK 335

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV--- 544
           +L  E+  RG       Y  +I G CK   +  A Q+ +LM+S   +PD   +S ++   
Sbjct: 336 ELYNEMITRGIAPDTITYNSLIDGFCKENCLHEANQMFDLMVSKGCEPDIVTYSILINSY 395

Query: 545 --KKVADDGM 552
              K  DDGM
Sbjct: 396 CKAKRVDDGM 405



 Score = 55.8 bits (133), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 36/154 (23%), Positives = 70/154 (45%)

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +N+A+ L   +  S   P  I +N L   +A+    +  +     M  NGI  D  T   
Sbjct: 51  VNDAIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTI 110

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I  +CR  ++  A  +L    K G +     +  +++G C   +V  A+ +++ M+  +
Sbjct: 111 MINCYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            +PD    ST++  +   G   EA  L  +++E+
Sbjct: 171 QRPDLVTVSTLINGLCLKGRVSEALVLIDRMVEY 204



 Score = 42.4 bits (98), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 30/117 (25%), Positives = 50/117 (42%)

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+ L+  M+++   P  I    L     R  Q +  +   K +   G +       ++I+
Sbjct: 54  AIDLFESMIQSRPLPTPIDFNRLCSAVARTKQYDLVLGFCKGMELNGIEHDMYTMTIMIN 113

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
             C+ KK+  A  VL       Y+PD   FST+V     +G   EA  L  +++E K
Sbjct: 114 CYCRKKKLLFAFSVLGRAWKLGYEPDTITFSTLVNGFCLEGRVSEAVALVDRMVEMK 170


>gi|356499327|ref|XP_003518493.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Glycine max]
          Length = 725

 Score =  226 bits (575), Expect = 3e-56,   Method: Compositional matrix adjust.
 Identities = 130/441 (29%), Positives = 240/441 (54%), Gaps = 5/441 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C   ++++A +L++ M      PD     ++I GL R  RI +A+K+L  M++ G
Sbjct: 246 LIHALCENNRVSEALQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRG 305

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              D +TY  ++ GLC+ GQ+  A ALL+++      P+ + YNT++     +G+F++A 
Sbjct: 306 FSTDALTYGYLMHGLCRMGQVDEARALLNKIP----NPNTVLYNTLISGYVASGRFEEAK 361

Query: 243 GF-WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              + + +  G  P   T+ I+I+ + K+  +  A+E+L++M  +   P+++TY  L+N 
Sbjct: 362 DLLYNNMVIAGYEPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILING 421

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CKQG+ ++A  ++N++ ++G+  N++ YN L+ +L   G  +   ++   M+     P 
Sbjct: 422 FCKQGRLEEAAEIVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPD 481

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           ++T+N LINGLCK   ++ A++ ++ M  +    + VTYNT++ A      + +A +L+ 
Sbjct: 482 IYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVD 541

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +    C    ITYN LI  L K G +EK + L+ +M+  GI P  I+   LI G CR  
Sbjct: 542 EMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTG 601

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V +A+  L+++  RG       Y  +I+GLCK   V  A  +   + S   +PD   ++
Sbjct: 602 KVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYN 661

Query: 542 TIVKKVADDGMTEEAYKLWQK 562
           T++ +   +GM  +A  L  K
Sbjct: 662 TLISRHCHEGMFNDACLLLYK 682



 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 238/480 (49%), Gaps = 41/480 (8%)

Query: 123 ILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           I++++   G    A++L+ D+    +  P F     ++  L+  D    A  V   M+  
Sbjct: 140 IMKHYGKAGLPGQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSR 199

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P   T+ +++  LC   ++ SA +LL +M+  GC P+ + Y T++  + +N +  +A
Sbjct: 200 GVSPTVYTFGVVMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEA 259

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   +D     C P + T+  +I  +C+   I  A ++LD M + G S D +TY  L++ 
Sbjct: 260 LQLLEDMFLMCCEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHG 319

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILDIMNEASHSP 360
            C+ G+ D+A  ++N + +    PN++ YNTL+    + G ++ A D + + M  A + P
Sbjct: 320 LCRMGQVDEARALLNKIPN----PNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGYEP 375

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT--------------------- 399
             +T+NI+I+GL K G +  A+   N+MV+K  +P+++T                     
Sbjct: 376 DAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIV 435

Query: 400 --------------YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                         YN ++ ALCK+G + EALQL   ++G  C P + T+N+LI+GL K 
Sbjct: 436 NSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKN 495

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             ME+A+ LY  M   G+  + +T+ TL+  F   D +++A  L+ E+  RG  + N  Y
Sbjct: 496 HKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNITY 555

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I  LCK+  V+  + + E M+     P     + ++  +   G   +A K  Q +I 
Sbjct: 556 NGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDMIH 615



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/332 (32%), Positives = 176/332 (53%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++     +G L  A +L++ M  +   P+      LI G  +  R+E+A++
Sbjct: 374 EPDAYTFNIMIDGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAE 433

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  M   G   +T+ YN ++  LCK G I  A+ L  EMS  GC+PD+ T+N+++  + 
Sbjct: 434 IVNSMSAKGLSLNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLC 493

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            N K ++A+  + D   +G     +TY  L+     +  I +A +++D+M   GC  D +
Sbjct: 494 KNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLVDEMLFRGCPLDNI 553

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN L+   CK G  +  + +   +L +G+ P  I+ N L+  L   G  +   K L  M
Sbjct: 554 TYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRTGKVNDALKFLQDM 613

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                +P + TYN LINGLCK G V  A N FN++ S+  +PD +TYNT++   C EGM 
Sbjct: 614 IHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITYNTLISRHCHEGMF 673

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           N+A  LL+    S   P  +T++ LI+ + KK
Sbjct: 674 NDACLLLYKGVDSGFIPNEVTWSILINYIVKK 705



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 118/425 (27%), Positives = 205/425 (48%), Gaps = 10/425 (2%)

Query: 144 ARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
           A++     F  C  LI  L  +   +   K+L+ M   G +     + +++    K G  
Sbjct: 91  AQKGYSHTFDACYLLIDKLGAVGDFKVIEKLLKQMKDEGLLFKESLFILIMKHYGKAGLP 150

Query: 204 RSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
             A  LL +M  V  C+P   +YN +L  + D    + A   + D L +G  P + T+ +
Sbjct: 151 GQATRLLLDMWGVYSCDPTFKSYNVVLDILVDGDCPRVAPNVFYDMLSRGVSPTVYTFGV 210

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           +++ +C    +  A  +L DMA  GC P+ V Y +L++  C+  +  +A+ ++ ++    
Sbjct: 211 VMKALCMVSEVDSACSLLRDMAKHGCVPNSVIYQTLIHALCENNRVSEALQLLEDMFLMC 270

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            EP+  T+N ++H L   G      K+LD M     S    TY  L++GLC+ G VD A 
Sbjct: 271 CEPDVQTFNDVIHGLCRAGRIHEAAKLLDRMLLRGFSTDALTYGYLMHGLCRMGQVDEA- 329

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH---LLNGSSCSPCLITYNTLI 439
                +++K   P+ V YNT++      G   EA  LL+   ++ G    P   T+N +I
Sbjct: 330 ---RALLNKIPNPNTVLYNTLISGYVASGRFEEAKDLLYNNMVIAGY--EPDAYTFNIMI 384

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DGL KKG +  A+ L  +M+     P+ IT+  LI GFC+  ++EEA +++  +  +G  
Sbjct: 385 DGLVKKGYLVSALELLNEMVAKRFEPNVITYTILINGFCKQGRLEEAAEIVNSMSAKGLS 444

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +    Y  +I  LCK   ++ A+Q+   M     KPD   F++++  +  +   EEA  L
Sbjct: 445 LNTVGYNCLICALCKDGNIEEALQLFGEMSGKGCKPDIYTFNSLINGLCKNHKMEEALSL 504

Query: 560 WQKLI 564
           +  + 
Sbjct: 505 YHDMF 509



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 66/230 (28%), Positives = 116/230 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C   K+ +A  L   M     I +      L+   +  D I++A K++
Sbjct: 481 DIYTFNSLINGLCKNHKMEEALSLYHDMFLEGVIANTVTYNTLVHAFLMRDSIQQAFKLV 540

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G   D ITYN ++  LCK G +   + L +EM   G  P +I+ N ++  +   
Sbjct: 541 DEMLFRGCPLDNITYNGLIKALCKTGAVEKGLGLFEEMLGKGIFPTIISCNILISGLCRT 600

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+ F +D + +G  P ++TY  LI  +CK   +  A  + + +  EG  PD +TY
Sbjct: 601 GKVNDALKFLQDMIHRGLTPDIVTYNSLINGLCKMGHVQEASNLFNKLQSEGIRPDAITY 660

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           N+L++  C +G ++DA L++   +  G  PN +T++ L++ +  +  W A
Sbjct: 661 NTLISRHCHEGMFNDACLLLYKGVDSGFIPNEVTWSILINYIVKKIPWGA 710


>gi|356529495|ref|XP_003533326.1| PREDICTED: uncharacterized protein LOC100779660 [Glycine max]
          Length = 1205

 Score =  226 bits (575), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 138/466 (29%), Positives = 247/466 (53%), Gaps = 8/466 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  FC  G++T    ++  + +R   PD      LI+GL    +++KA 
Sbjct: 90  IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL 149

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                ++  G   + ++Y  ++ G+CK G  R+AI LL ++     +P+V+ Y+TI+  +
Sbjct: 150 HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDAL 209

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                  +A G + +   KG    ++TY+ LI   C +  +  AI +L++M ++  +P++
Sbjct: 210 CKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNV 269

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN LV+  CK+GK  +A  V+  +L   ++P+ ITY+TL+              + + 
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+    +P V TY ILING CK  +VD A+N F +M  KN  P IVTY++++  LCK G 
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +     L+  ++       +ITY++LIDGL K G +++A+ L+ +M + GI P+  T   
Sbjct: 390 IPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTI 449

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++++A ++ +++  +G  +    Y ++I G CK   ++ A+ +L  M  + 
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMIDGHCKQGLLEEALTMLSKMEDNG 509

Query: 533 YKPDDTVFSTIV----KKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             PD   F  I+    KK  + G      K+W+ ++E K   KG T
Sbjct: 510 CIPDAVTFEIIIIALFKKDENGGNVGFDKKVWE-IVEHK---KGET 551



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 226/443 (51%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           NKIL +F      + A  L   +  +   PD      LI     + +I     VL  ++ 
Sbjct: 63  NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILK 122

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PDT+T N ++ GLC +GQ++ A+   D++   G + + ++Y T++  +   G  + 
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRA 182

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI   +    +   P ++ Y+ +I+ +CK   ++ A  +  +M ++G S D+VTY++L+ 
Sbjct: 183 AIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 242

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C +GK  +A+ ++N ++ + + PN  TYN L+ +L   G       +L +M +A   P
Sbjct: 243 GFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY+ L++G      V +A + FN M      PD+ TY  ++   CK  M++EAL L 
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++  +  P ++TY++LIDGL K G +     L  +M + G   + IT+ +LI G C+ 
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKN 422

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             ++ A+ L  ++  +G +     + +++ GLCK  ++  A +V + +++  Y  +   +
Sbjct: 423 GHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTY 482

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++      G+ EEA  +  K+
Sbjct: 483 NVMIDGHCKQGLLEEALTMLSKM 505



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 200/400 (50%), Gaps = 2/400 (0%)

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           I  ++ A      M+     P  I +N ++    K     +A++L   + + G +PD+IT
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
            N ++      G+           L++G PP  +T   LI+ +C +  + +A+   D + 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +G   + V+Y +L+N  CK G    A+ ++  +  R  +PN + Y+T++ +L       
Sbjct: 157 AQGFQLNQVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVS 216

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +   M     S  V TY+ LI G C  G +  AI   N+MV K   P++ TYN ++
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            ALCKEG + EA  +L ++  +   P +ITY+TL+DG      ++KA  ++  M   G++
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD  T+  LI GFC+   V+EA++L KE+ ++        Y  +I GLCKS ++     +
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 525 LELMISSRYKPDDTV-FSTIVKKVADDGMTEEAYKLWQKL 563
           ++ M   R +P + + +S+++  +  +G  + A  L+ K+
Sbjct: 397 IDEM-HDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKM 435



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 216/431 (50%), Gaps = 7/431 (1%)

Query: 137 SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGG 196
           S+   ++  R+  P   F   ++    ++     A  +   + + G  PD IT N+++  
Sbjct: 45  SQFNRMLCMRHTPPIIQFN-KILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINC 103

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
            C  GQI    ++L ++   G  PD +T NT+++ +   G+ K+A+ F    L +G    
Sbjct: 104 FCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLN 163

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
            ++Y  LI  VCK      AI++L  +      P++V Y+++++  CK     +A  + +
Sbjct: 164 QVSYGTLINGVCKIGDTRAAIKLLQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFS 223

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +  +G+  + +TY+TL++     G       +L+ M   + +P V+TYNIL++ LCK G
Sbjct: 224 EMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEG 283

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS---CSPCLI 433
            V  A +    M+    +PD++TY+T++       ++ E  +  H+ N  S    +P + 
Sbjct: 284 KVKEAKSVLAVMLKACVKPDVITYSTLMDGYF---LVYEVKKAQHVFNAMSLMGVTPDVH 340

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TY  LI+G  K   +++A+ L+ +M +  + P  +T+ +LI G C++ ++    DL+ E+
Sbjct: 341 TYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEM 400

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
             RG       Y  +I GLCK+  +D AI +   M     +P+   F+ ++  +   G  
Sbjct: 401 HDRGQPANVITYSSLIDGLCKNGHLDRAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRL 460

Query: 554 EEAYKLWQKLI 564
           ++A +++Q L+
Sbjct: 461 KDAQEVFQDLL 471



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 171/341 (50%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L   DG   + +    + I+   C    +++A  L   M  +    D      LI G   
Sbjct: 187 LQKIDGRLTKPNVVMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             ++++A  +L  MV+    P+  TYN++V  LCK G+++ A ++L  M  +  +PDVIT
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y+T++   F   + K+A   +      G  P + TYTILI   CK   +  A+ +  +M 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +   P IVTY+SL++  CK G+      +I+ +  RG   N ITY++L+  L   G  D
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMHDRGQPANVITYSSLIDGLCKNGHLD 426

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               + + M +    P  FT+ IL++GLCK G +  A   F  +++K    ++ TYN ++
Sbjct: 427 RAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
              CK+G+L EAL +L  +  + C P  +T+  +I  L KK
Sbjct: 487 DGHCKQGLLEEALTMLSKMEDNGCIPDAVTFEIIIIALFKK 527



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 78/249 (31%), Positives = 131/249 (52%), Gaps = 2/249 (0%)

Query: 251  KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            KG  P L T  ILI   C    I     +L  +   G  PD +T+ +L+N  C +G+ + 
Sbjct: 955  KGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNK 1014

Query: 311  AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
            A+   + LL++G + N ++Y TL++ +   G   A  K+L  ++     P V  YN +I+
Sbjct: 1015 ALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIID 1074

Query: 371  GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
             LCK+ LV +A   F +M  K    D+VTYNT++   C  G L EA+ LL+ +   + +P
Sbjct: 1075 ALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINP 1134

Query: 431  CLITYNTLIDGLAKKG--CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
             + TYN L+D L K+G   +++++ +  +M +NG   + +T   +I      D+ ++   
Sbjct: 1135 NVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEK 1194

Query: 489  LLKEIGKRG 497
            LL E+  RG
Sbjct: 1195 LLHEMIARG 1203



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 75/261 (28%), Positives = 130/261 (49%), Gaps = 2/261 (0%)

Query: 205  SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
            +A++L   + + G +PD+ T N ++      G+           L++G  P  IT+T LI
Sbjct: 944  TAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLI 1003

Query: 265  EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
              +C +  + +A+   D +  +G   + V+Y +L+N  CK G    A+ ++  +  R  +
Sbjct: 1004 NGLCLKGQVNKALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTK 1063

Query: 325  PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            P+ + YNT++ +L           +   MN    S  V TYN LI G C  G +  AI  
Sbjct: 1064 PDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGL 1123

Query: 385  FNQMVSKNCQPDIVTYNTVLGALCKEG--MLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             N+MV K   P++ TYN ++ ALCKEG  +L+E+L +L  +  + C    +T+  +I  L
Sbjct: 1124 LNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISAL 1183

Query: 443  AKKGCMEKAMVLYGQMMENGI 463
             +K   +K   L  +M+  G+
Sbjct: 1184 FEKDENDKVEKLLHEMIARGL 1204



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 78/293 (26%), Positives = 144/293 (49%), Gaps = 37/293 (12%)

Query: 274  ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            + A+ +   + ++G  PD+ T N L+N  C  G+      ++  +L RG  P++IT+ T 
Sbjct: 943  STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTT- 1001

Query: 334  LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
                                              LINGLC  G V++A++  ++++++  
Sbjct: 1002 ----------------------------------LINGLCLKGQVNKALHFHDKLLAQGF 1027

Query: 394  QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            Q + V+Y T++  +CK G    A++LL  ++G    P ++ YNT+ID L K   + KA  
Sbjct: 1028 QLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDALCKHQLVSKAYG 1087

Query: 454  LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
            L+ +M   GIS D +T+ TLI+GFC   +++EA+ LL ++  +        Y +++  LC
Sbjct: 1088 LFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNVRTYNILVDALC 1147

Query: 514  KSKK--VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            K  K  +D ++ +L  M  +  K +   F  I+  + +    ++  KL  ++I
Sbjct: 1148 KEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLLHEMI 1200



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 125/244 (51%), Gaps = 2/244 (0%)

Query: 180  MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            + G  PD  T N+++   C  GQI    ++L ++   G  PD IT+ T++  +   G+  
Sbjct: 954  LKGIQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVN 1013

Query: 240  QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            +A+ F    L +G     ++Y  LI  VCK      AI++L  +      PD+V YN+++
Sbjct: 1014 KALHFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTII 1073

Query: 300  NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
            +  CK      A  +   +  +G+  + +TYNTL++     G       +L+ M   + +
Sbjct: 1074 DALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTIN 1133

Query: 360  PTVFTYNILINGLCKYG--LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            P V TYNIL++ LCK G  L+D +++  ++M    C+ + VT+  ++ AL ++   ++  
Sbjct: 1134 PNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVE 1193

Query: 418  QLLH 421
            +LLH
Sbjct: 1194 KLLH 1197



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/243 (27%), Positives = 127/243 (52%), Gaps = 2/243 (0%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            ++ D  T N ++  FC  G++T    ++  + +R   PD      LI GL    ++ KA 
Sbjct: 957  IQPDLFTLNILINCFCHMGQITFNFSILAKILKRGYHPDTITFTTLINGLCLKGQVNKAL 1016

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                 ++  G   + ++Y  ++ G+CK G  R+AI LL ++     +PDV+ YNTI+  +
Sbjct: 1017 HFHDKLLAQGFQLNQVSYGTLINGVCKIGDTRAAIKLLRKIDGRLTKPDVVMYNTIIDAL 1076

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              +    +A G + +   KG    ++TY  LI   C    +  AI +L+ M ++  +P++
Sbjct: 1077 CKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNKMVLKTINPNV 1136

Query: 293  VTYNSLVNFSCKQGK--YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
             TYN LV+  CK+GK   D+++ +++ +   G + N++T+  ++ +L  +   D V+K+L
Sbjct: 1137 RTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFEIIISALFEKDENDKVEKLL 1196

Query: 351  DIM 353
              M
Sbjct: 1197 HEM 1199



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 63/128 (49%), Gaps = 2/128 (1%)

Query: 109  DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
            DG   + D    N I+   C    ++ A  L   M  +    D      LI G   + ++
Sbjct: 1058 DGRLTKPDVVMYNTIIDALCKHQLVSKAYGLFFEMNVKGISADVVTYNTLIYGFCIVGKL 1117

Query: 169  EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ--IRSAIALLDEMSVSGCEPDVITYN 226
            ++A  +L  MV+    P+  TYN++V  LCK G+  +  ++++L +M  +GC+ + +T+ 
Sbjct: 1118 KEAIGLLNKMVLKTINPNVRTYNILVDALCKEGKDLLDESLSMLSKMEDNGCKANAVTFE 1177

Query: 227  TILRTMFD 234
             I+  +F+
Sbjct: 1178 IIISALFE 1185


>gi|357113916|ref|XP_003558747.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g01110-like [Brachypodium distachyon]
          Length = 651

 Score =  225 bits (574), Expect = 4e-56,   Method: Compositional matrix adjust.
 Identities = 124/385 (32%), Positives = 201/385 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D ++ N ++  FC  G+L +A +    M  R   PD      LI    R   ++ A+
Sbjct: 260 VAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAA 319

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           + L+ M   G +PD + Y M++GG C+ G +  A+ + DEM   GC PDV+TYNT+L  +
Sbjct: 320 EYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGL 379

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +   A     +   +G PP L T+T LI   C+   I +A++  D ++ +   PDI
Sbjct: 380 CKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDI 439

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L++  C+QG    A  + +++ SR + PN +TY+ L+ S   +G  D     LD 
Sbjct: 440 VTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDE 499

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P + TYN +I G C+ G V +      +M      PD++TYNT++    KEG 
Sbjct: 500 MVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGK 559

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA  LL ++   +  P  +TYN +I G +  G M++A  +Y +M   GI PD  T+ +
Sbjct: 560 MHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMS 619

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           +I G   A   +++  L  E+ ++G
Sbjct: 620 MINGHVVAGNSKKSFQLHDEMLQKG 644



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 121/450 (26%), Positives = 232/450 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T+N ++      G +  A  LID M  +   P      ++++GL+R  R +KA +V 
Sbjct: 193 DVVTHNVMVDARFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVF 252

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD  ++NM++GG C+ G++  A+    EM      PDV++++ ++      
Sbjct: 253 RAMDACGVAPDVRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRR 312

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   A  + ++    G  P  + YT++I   C+   +  A+ V D+M   GC PD+VTY
Sbjct: 313 GEMDHAAEYLREMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTY 372

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  CK+ +  DA  ++N +  RG+ P+  T+ TL+H     G  +   +  D +++
Sbjct: 373 NTLLNGLCKERRLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISD 432

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN LI+G+C+ G + +A   ++ M S+   P+ VTY+ ++ + C++G ++ 
Sbjct: 433 QRLRPDIVTYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDN 492

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A   L  +      P ++TYN++I G  + G + K      +M  + + PD IT+ TLI 
Sbjct: 493 AFAFLDEMVNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIH 552

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+ +  ++ EA +LLK +     +     Y ++I G      +  A  V + M +   +P
Sbjct: 553 GYVKEGKMHEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEP 612

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   + +++      G ++++++L  ++++
Sbjct: 613 DRYTYMSMINGHVVAGNSKKSFQLHDEMLQ 642



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 121/452 (26%), Positives = 233/452 (51%), Gaps = 4/452 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T N ++ ++C   +  +   +I  M +R   PD      ++    R   +E A  
Sbjct: 156 EVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMA 215

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  P  +TYN ++ GL + G+   A  +   M   G  PDV ++N ++    
Sbjct: 216 LIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFC 275

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+ ++A+ F+K+   +   P +++++ LI    ++  +  A E L +M   G  PD V
Sbjct: 276 RAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGV 335

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y  ++   C+ G   +A+ V + +++ G  P+ +TYNTLL+ L         +++L+ M
Sbjct: 336 IYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEM 395

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E    P + T+  LI+G C+ G +++A+  F+ +  +  +PDIVTYNT++  +C++G L
Sbjct: 396 KERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDL 455

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +A +L   ++     P  +TY+ LID   +KG ++ A     +M+  GI P+ +T+ ++
Sbjct: 456 GKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNKGIVPNIMTYNSI 515

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMISS 531
           I G+CR+  V +    L ++  R +K+      Y  +IHG  K  K+  A  +L++M + 
Sbjct: 516 IKGYCRSGNVSKGQQFLPKM--RHDKVMPDLITYNTLIHGYVKEGKMHEAFNLLKIMENE 573

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             +PD   ++ I+   +  G  +EA  +++K+
Sbjct: 574 NVQPDAVTYNMIISGFSVHGNMQEADWVYKKM 605



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 199/397 (50%)

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           +   ++++ S    +T T N+MV   CK  Q      ++ EM      PDV+T+N ++  
Sbjct: 144 ADAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDA 203

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
            F  G  + A+      + KG  P L+TY  +++ + +     +A EV   M   G +PD
Sbjct: 204 RFRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPD 263

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           + ++N L+   C+ G+ ++A+     +  R + P+ ++++ L+     RG  D   + L 
Sbjct: 264 VRSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLR 323

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M E    P    Y ++I G C+ GL+  A+   ++MV+  C PD+VTYNT+L  LCKE 
Sbjct: 324 EMREFGLMPDGVIYTMVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKER 383

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L++A +LL+ +      P L T+ TLI G  + G +EKA+  +  + +  + PD +T+ 
Sbjct: 384 RLSDAEELLNEMKERGVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYN 443

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           TLI G CR   + +A +L  ++  R     +  Y ++I   C+  +VD A   L+ M++ 
Sbjct: 444 TLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEMVNK 503

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              P+   +++I+K     G   +  +   K+   KV
Sbjct: 504 GIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKV 540



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 84/318 (26%), Positives = 168/318 (52%), Gaps = 2/318 (0%)

Query: 259 TYT--ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           TYT  I++   CK         V+ +M      PD+VT+N +V+   + G  + A+ +I+
Sbjct: 159 TYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDARFRAGDVEAAMALID 218

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
           +++S+G++P  +TYN++L  L   G WD   ++   M+    +P V ++N+LI G C+ G
Sbjct: 219 SMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDVRSFNMLIGGFCRAG 278

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            ++ A+  + +M  +   PD+V+++ ++G   + G ++ A + L  +      P  + Y 
Sbjct: 279 ELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLREMREFGLMPDGVIYT 338

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            +I G  + G M +A+ +  +M+  G  PD +T+ TL+ G C+  ++ +A +LL E+ +R
Sbjct: 339 MVIGGFCRAGLMLEALRVRDEMVAFGCLPDVVTYNTLLNGLCKERRLSDAEELLNEMKER 398

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       +  +IHG C+   ++ A+Q  + +   R +PD   ++T++  +   G   +A
Sbjct: 399 GVPPDLCTFTTLIHGYCRDGNIEKALQFFDTISDQRLRPDIVTYNTLIDGMCRQGDLGKA 458

Query: 557 YKLWQKLIEWKVFEKGTT 574
            +LW  +   ++F    T
Sbjct: 459 NELWDDMHSREIFPNHVT 476



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 57/208 (27%), Positives = 91/208 (43%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C +G L  A++L D M  R   P+      LI       +++ A   L  M
Sbjct: 441 TYNTLIDGMCRQGDLGKANELWDDMHSREIFPNHVTYSILIDSHCEKGQVDNAFAFLDEM 500

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G VP+ +TYN ++ G C+ G +      L +M      PD+ITYNT++      GK 
Sbjct: 501 VNKGIVPNIMTYNSIIKGYCRSGNVSKGQQFLPKMRHDKVMPDLITYNTLIHGYVKEGKM 560

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A    K    +   P  +TY ++I        +  A  V   M   G  PD  TY S+
Sbjct: 561 HEAFNLLKIMENENVQPDAVTYNMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSM 620

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +N     G    +  + + +L +G+ P+
Sbjct: 621 INGHVVAGNSKKSFQLHDEMLQKGLAPD 648



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 39/190 (20%), Positives = 93/190 (48%)

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           +++  ++S N + +  T N ++ + CK     E   ++  +      P ++T+N ++D  
Sbjct: 145 DAYRLVLSSNSEVNTYTLNIMVHSYCKTLQFGEVDTVISEMEKRCVFPDVVTHNVMVDAR 204

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            + G +E AM L   M+  GI P  +T+ +++ G  R  + ++A ++ + +   G     
Sbjct: 205 FRAGDVEAAMALIDSMVSKGIKPGLVTYNSVLKGLLRNGRWDKAREVFRAMDACGVAPDV 264

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            ++ ++I G C++ +++ A++  + M   R  PD   FS ++      G  + A +  ++
Sbjct: 265 RSFNMLIGGFCRAGELEEALRFYKEMRGRRVTPDVVSFSCLIGLFTRRGEMDHAAEYLRE 324

Query: 563 LIEWKVFEKG 572
           + E+ +   G
Sbjct: 325 MREFGLMPDG 334



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 36/126 (28%), Positives = 52/126 (41%), Gaps = 9/126 (7%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           + K  HD  +P         D  T N ++  +   GK+ +A  L+ IM   N  PD    
Sbjct: 532 LPKMRHDKVMP---------DLITYNTLIHGYVKEGKMHEAFNLLKIMENENVQPDAVTY 582

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
             +I G      +++A  V + M   G  PD  TY  M+ G    G  + +  L DEM  
Sbjct: 583 NMIISGFSVHGNMQEADWVYKKMGARGIEPDRYTYMSMINGHVVAGNSKKSFQLHDEMLQ 642

Query: 216 SGCEPD 221
            G  PD
Sbjct: 643 KGLAPD 648


>gi|357521289|ref|XP_003630933.1| Tau class glutathione S-transferase [Medicago truncatula]
 gi|355524955|gb|AET05409.1| Tau class glutathione S-transferase [Medicago truncatula]
          Length = 1320

 Score =  225 bits (574), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 221/443 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L   C  GK+ +A  L+  M  R   PD      ++ G  RI  ++K  K++  +  
Sbjct: 246 NIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDELKG 305

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD   YN ++  LCK G++  A  LL  M   G  PD + Y T++      G    
Sbjct: 306 KGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVSA 365

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + +  RK   P ++TYT +I  +CK   +  A E+ ++M ++G  PD VTY +L++
Sbjct: 366 ACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALID 425

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+  +A  V N ++ +G+ PN +TY  L   L   G  D  +++L  M+     P
Sbjct: 426 GYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQP 485

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V+TYN ++NGLCK G +++ +    +M      PD +TY T++ A CK G + +A +LL
Sbjct: 486 NVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELL 545

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            ++      P L+T+N L++G    G +E    L   M+E GI P+  T  +L+  +C  
Sbjct: 546 RIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIK 605

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           + +    ++ K +  RG    ++ Y ++I G CK++ +  A  + + M+   Y      +
Sbjct: 606 NNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATY 665

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
             +++         EA KL++++
Sbjct: 666 DALIRGFYKRKKFVEARKLFEEM 688



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/400 (29%), Positives = 199/400 (49%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  ++ DE   N I+   C  G++ +A +L+  M +    PD      +I G  ++  + 
Sbjct: 305 GKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGNVS 364

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A K+   M     VPD +TY  ++ G+CK G++  A  + +EM V G EPD +TY  ++
Sbjct: 365 AACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTALI 424

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                 G+ K+A       ++KG  P ++TYT L + +CK   I  A E+L +M+ +G  
Sbjct: 425 DGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKGLQ 484

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++ TYN++VN  CK G  +  V ++  +   G  P++ITY TL+ +    G      ++
Sbjct: 485 PNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHEL 544

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L IM      PT+ T+N+L+NG C  G+++        M+ K   P+  T+N+++   C 
Sbjct: 545 LRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCI 604

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +  +    ++   ++     P   TYN LI G  K   M++A  L+ +M+E G S    T
Sbjct: 605 KNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAAT 664

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +  LI GF +  +  EA  L +E+ K G       Y + +
Sbjct: 665 YDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFV 704



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/424 (27%), Positives = 213/424 (50%), Gaps = 6/424 (1%)

Query: 148 QIPDFHFCIN------LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           + P+   C N      ++  L ++ ++ +A  +L  M   G  PD ++Y ++V G C+ G
Sbjct: 232 EFPELGVCWNTVSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIG 291

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++   + L+DE+   G +PD   YN I+  +  NG+  +A    +   + G  P  + YT
Sbjct: 292 ELDKVLKLVDELKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYT 351

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            +I   CK   ++ A ++ D+M  +   PDIVTY S+++  CK GK  +A  + N +L +
Sbjct: 352 TVISGFCKLGNVSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVK 411

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G+EP+ +TY  L+      G       + + M +   +P V TY  L +GLCK G +D A
Sbjct: 412 GLEPDEVTYTALIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVA 471

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
               ++M  K  QP++ TYNT++  LCK G + + ++L+  ++ +   P  ITY TL+D 
Sbjct: 472 NELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDA 531

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K G M KA  L   M+   + P  +T   L+ GFC +  +E+   L++ + ++G    
Sbjct: 532 YCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPN 591

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            + +  ++   C    +    ++ + M      PD   ++ ++K        +EA+ L +
Sbjct: 592 ATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHK 651

Query: 562 KLIE 565
           +++E
Sbjct: 652 EMVE 655



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/470 (24%), Positives = 227/470 (48%), Gaps = 23/470 (4%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMAR-----------RNQIPDFHFCINLIRGLI 163
           ND +T  +++  FC++ K+ D SK   +                 + D +F + +  G +
Sbjct: 129 NDIQTAKRLVFEFCAKPKI-DVSKSFHLFTEMLIYTYKDWGSHPLVFDLYFQVLVENGFV 187

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL-CKRGQIRSAIALLDEMSVSGCEPDV 222
                 +A K+   ++  G V    + N+ +  L C    I+ A+ + +E    G   + 
Sbjct: 188 L-----EAQKLFHKLLRYGVVVSVDSCNLFLSRLSCNFEGIKIAVKVFEEFPELGVCWNT 242

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           ++ N +L  +   GK ++A         +G  P +++Y +++   C+   + + ++++D+
Sbjct: 243 VSCNIVLHCLCQLGKVREAHNLLVQMTDRGNFPDVVSYGVVVSGYCRIGELDKVLKLVDE 302

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           +  +G  PD   YN+++   CK G+  +A  ++  +   G+ P+++ Y T++      G 
Sbjct: 303 LKGKGLKPDEYIYNNIILLLCKNGEVVEAEQLLRGMRKWGVFPDNVVYTTVISGFCKLGN 362

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
             A  K+ D M      P + TY  +I+G+CK G +  A   FN+M+ K  +PD VTY  
Sbjct: 363 VSAACKLFDEMRRKKIVPDIVTYTSVIHGICKSGKMVEAREMFNEMLVKGLEPDEVTYTA 422

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   CK G + EA  + + +     +P ++TY  L DGL K G ++ A  L  +M   G
Sbjct: 423 LIDGYCKAGEMKEAFSVHNQMVQKGLTPNVVTYTALADGLCKNGEIDVANELLHEMSRKG 482

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + P+  T+ T++ G C+   +E+ V L++E+   G       Y  ++   CK  ++  A 
Sbjct: 483 LQPNVYTYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAH 542

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
           ++L +M++ R +P    F+ ++      GM E+     ++LIEW + EKG
Sbjct: 543 ELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDG----ERLIEW-MLEKG 587



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/252 (24%), Positives = 116/252 (46%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +    C  G++  A++L+  M+R+   P+ +    ++ GL +I  IE+  K+++ M
Sbjct: 454 TYTALADGLCKNGEIDVANELLHEMSRKGLQPNVYTYNTIVNGLCKIGNIEQTVKLMEEM 513

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            ++G  PDTITY  ++   CK G++  A  LL  M     +P ++T+N ++     +G  
Sbjct: 514 DLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGML 573

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           +      +  L KG  P   T+  L++Q C +  +    E+   M   G  PD  TYN L
Sbjct: 574 EDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNIL 633

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK     +A  +   ++ +G    + TY+ L+     R  +    K+ + M +   
Sbjct: 634 IKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGL 693

Query: 359 SPTVFTYNILIN 370
                 Y+I ++
Sbjct: 694 VAEKDIYDIFVD 705



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 59/254 (23%), Positives = 108/254 (42%), Gaps = 1/254 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C  G +    KL++ M      PD      L+    ++  + KA ++L+IM
Sbjct: 489 TYNTIVNGLCKIGNIEQTVKLMEEMDLAGFYPDTITYTTLMDAYCKMGEMAKAHELLRIM 548

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +     P  +T+N+++ G C  G +     L++ M   G  P+  T+N++++        
Sbjct: 549 LNKRLQPTLVTFNVLMNGFCMSGMLEDGERLIEWMLEKGIMPNATTFNSLMKQYCIKNNM 608

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           +     +K    +G  P   TY ILI+  CK   +  A  +  +M  +G S    TY++L
Sbjct: 609 RATTEIYKAMHDRGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMVEKGYSVTAATYDAL 668

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD-IMNEAS 357
           +    K+ K+ +A  +   +   G+      Y+  +      G W+   ++ D  M E S
Sbjct: 669 IRGFYKRKKFVEARKLFEEMRKHGLVAEKDIYDIFVDVNYEEGNWEITLELCDEFMTELS 728

Query: 358 HSPTVFTYNILING 371
            +  V      I G
Sbjct: 729 GTIFVVYICFFIGG 742



 Score = 69.3 bits (168), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 52/254 (20%), Positives = 107/254 (42%), Gaps = 7/254 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  +C  G++  A +L+ IM  +   P       L+ G      +E   +++
Sbjct: 521 DTITYTTLMDAYCKMGEMAKAHELLRIMLNKRLQPTLVTFNVLMNGFCMSGMLEDGERLI 580

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G +P+  T+N ++   C +  +R+   +   M   G  PD  TYN +++     
Sbjct: 581 EWMLEKGIMPNATTFNSLMKQYCIKNNMRATTEIYKAMHDRGVMPDSNTYNILIKGHCKA 640

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              K+A    K+ + KG      TY  LI    K+     A ++ ++M   G   +   Y
Sbjct: 641 RNMKEAWFLHKEMVEKGYSVTAATYDALIRGFYKRKKFVEARKLFEEMRKHGLVAEKDIY 700

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +  V+ + ++G ++  + + +  ++       + Y      +G      +V+   DI+  
Sbjct: 701 DIFVDVNYEEGNWEITLELCDEFMTELSGTIFVVYICFF--IGG-----SVESNFDIITF 753

Query: 356 ASHSPTVFTYNILI 369
            +H+ T FT   L 
Sbjct: 754 EAHARTPFTQKFLF 767


>gi|255561697|ref|XP_002521858.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538896|gb|EEF40494.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 533

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 228/450 (50%), Gaps = 15/450 (3%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M R   +P+      +I G  ++ R ++A   L+ M + G  P+ IT+NM++ GLC+ G+
Sbjct: 9   MERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLCRDGR 68

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           ++    +L EMS  G  PD +TYNT++      G F QA+    + +R G  P ++TYT 
Sbjct: 69  LKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTS 128

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI  +CK   + RA+E  D M + G  P+  TY +++N   +QG  D+A  V+N +   G
Sbjct: 129 LINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSG 188

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             P+ +TYN L++     G  +    +L  M      P V +Y+ +I+G  +   +DRA 
Sbjct: 189 FIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAF 248

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
               +M+ K+  PD VTY++++  LC++  L EA  +   +      P   TY TLI+  
Sbjct: 249 QMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAY 308

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+G + KA+ L+ +M++ G  PD +T+  LI G  +  + +EA  LL ++    +    
Sbjct: 309 CKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSA 368

Query: 503 SAYRLVIH---------------GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
             Y  +I                G C    +D A QV E MI+  +KP++ +++ I+   
Sbjct: 369 VTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGH 428

Query: 548 ADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
              G   +AYKL+++++         T+LA
Sbjct: 429 CRIGNVLKAYKLYKEMVHVDFVPHTVTVLA 458



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 107/359 (29%), Positives = 188/359 (52%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
            +    EM  +GC P+V+TYNT++       +  +A GF +    KG  P LIT+ ++I 
Sbjct: 2   GLRFFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIIN 61

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            +C+   +    EVL +M+ +G  PD VTYN+LVN  CK+G +  A+++   ++  G+ P
Sbjct: 62  GLCRDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSP 121

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N +TY +L++S+   G  +   +  D M+     P   TY  +ING  + GL+D A    
Sbjct: 122 NVVTYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVL 181

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           N+M      P IVTYN ++   C  G + EA+ LL  + G    P +++Y+T+I G A+ 
Sbjct: 182 NEMTRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARN 241

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             +++A  +  +M+   + PD +T+ +LI G C   ++ EA D+ +E+           Y
Sbjct: 242 QELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTY 301

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             +I+  CK   ++ A+ + + MI   + PD   ++ ++  +     ++EA +L  KL 
Sbjct: 302 TTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLF 360



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 95/331 (28%), Positives = 175/331 (52%)

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
           F+K+  R GC P ++TY  +I+  CK      A   L  M ++G  P+++T+N ++N  C
Sbjct: 5   FFKEMERNGCLPNVVTYNTMIDGYCKLKRTDEAFGFLRSMGLKGLEPNLITFNMIINGLC 64

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           + G+  +   V+  +  +G  P+ +TYNTL++     G +     +   M     SP V 
Sbjct: 65  RDGRLKETSEVLVEMSRKGYVPDEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVV 124

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TY  LIN +CK G ++RA+  F+QM  +   P+  TY T++    ++G+L+EA ++L+ +
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
             S   P ++TYN LI+G    G ME+A+ L   M+  G+ PD +++ T+I GF R  ++
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           + A  +  E+  +        Y  +I GLC+ +++  A  + + M++ +  PD+  ++T+
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +     +G   +A  L  ++I+        T
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVT 335



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/394 (25%), Positives = 184/394 (46%), Gaps = 15/394 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++ + C  G L  A +  D M  R   P+      +I G  +   +++A +VL  M
Sbjct: 125 TYTSLINSMCKAGNLNRAMEFFDQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEM 184

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG +P  +TYN ++ G C  G++  AI LL +M   G  PDV++Y+TI+     N + 
Sbjct: 185 TRSGFIPSIVTYNALINGHCVLGRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQEL 244

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A     + + K   P  +TY+ LI+ +C+Q  +  A ++  +M      PD  TY +L
Sbjct: 245 DRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTL 304

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK+G  + A+ + + ++ +G  P+++TYN L++ L  +       ++L  +     
Sbjct: 305 INAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDS 364

Query: 359 SPTVFTYNILIN---------------GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
            P+  TYN LI                G C  GL+D A   F  M++KN +P+   YN +
Sbjct: 365 IPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVI 424

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +   C+ G + +A +L   +      P  +T   L+  L  +G   +   + G ++ +  
Sbjct: 425 IHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVIGDILRSCK 484

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
             D    + L+    +   ++   +LL E+ K G
Sbjct: 485 LTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDG 518



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 99/374 (26%), Positives = 175/374 (46%), Gaps = 15/374 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T N ++  +C  G    A  L   M R    P+     +LI  + +   + +A +  
Sbjct: 87  DEVTYNTLVNGYCKEGNFHQALVLHAEMVRNGLSPNVVTYTSLINSMCKAGNLNRAMEFF 146

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G  P+  TY  ++ G  ++G +  A  +L+EM+ SG  P ++TYN ++      
Sbjct: 147 DQMHVRGLCPNERTYTTIINGFAQQGLLDEAYRVLNEMTRSGFIPSIVTYNALINGHCVL 206

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ ++AIG  +D + KG  P +++Y+ +I    +   + RA ++  +M  +   PD VTY
Sbjct: 207 GRMEEAIGLLQDMVGKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTY 266

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +SL+   C+Q +  +A  +   +L+  + P+  TY TL+++    G  +    + D M +
Sbjct: 267 SSLIQGLCEQRRLTEACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQ 326

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL----------- 404
               P   TYN+LINGL K      A     ++   +  P  VTYNT++           
Sbjct: 327 KGFLPDAVTYNVLINGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCNIEFKSA 386

Query: 405 ----GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
                  C +G+++EA Q+   +   +  P    YN +I G  + G + KA  LY +M+ 
Sbjct: 387 VALVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIHGHCRIGNVLKAYKLYKEMVH 446

Query: 461 NGISPDDITHRTLI 474
               P  +T   L+
Sbjct: 447 VDFVPHTVTVLALV 460



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 87/360 (24%), Positives = 143/360 (39%), Gaps = 63/360 (17%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  V  D  + + I+  F    +L  A ++   M  ++ +PD     +LI+GL    R+ 
Sbjct: 221 GKGVLPDVVSYSTIISGFARNQELDRAFQMKVEMIGKSVLPDAVTYSSLIQGLCEQRRLT 280

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A  + Q M+     PD  TY  ++   CK G +  A+ L DEM   G  PD +TYN ++
Sbjct: 281 EACDMFQEMLTIKLPPDEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLI 340

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +    + K+A             P  +TY  LIE  C        IE    +A     
Sbjct: 341 NGLNKQARSKEARRLLLKLFYDDSIPSAVTYNTLIENCCN-------IEFKSAVA----- 388

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
                   LV   C +G  D+A  V  +++++  +PN   YN ++H              
Sbjct: 389 --------LVKGFCMKGLMDEADQVFESMINKNHKPNEAIYNVIIH-------------- 426

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
                                G C+ G V +A   + +MV  +  P  VT   ++ AL  
Sbjct: 427 ---------------------GHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFT 465

Query: 410 EGMLNEALQLLHLLNGSSCSPCLIT----YNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           EGM  E  +++    G     C +T       L++   K+G M+    L  +M ++G+ P
Sbjct: 466 EGMDGELNEVI----GDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIP 521



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 51/229 (22%), Positives = 93/229 (40%), Gaps = 15/229 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T   ++  +C  G L  A  L D M ++  +PD      LI GL +  R ++A ++L
Sbjct: 297 DEFTYTTLINAYCKEGDLNKALHLHDEMIQKGFLPDAVTYNVLINGLNKQARSKEARRLL 356

Query: 176 QIMVMSGGVPDTITYNMM---------------VGGLCKRGQIRSAIALLDEMSVSGCEP 220
             +     +P  +TYN +               V G C +G +  A  + + M     +P
Sbjct: 357 LKLFYDDSIPSAVTYNTLIENCCNIEFKSAVALVKGFCMKGLMDEADQVFESMINKNHKP 416

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           +   YN I+      G   +A   +K+ +     P+ +T   L++ +  +       EV+
Sbjct: 417 NEAIYNVIIHGHCRIGNVLKAYKLYKEMVHVDFVPHTVTVLALVKALFTEGMDGELNEVI 476

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
            D+       D      LV  + K+G  D    ++  +   G+ P++ T
Sbjct: 477 GDILRSCKLTDAELSKVLVEINQKEGNMDMVFNLLTEMAKDGLIPSTGT 525


>gi|225452992|ref|XP_002263038.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 644

 Score =  225 bits (573), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 136/493 (27%), Positives = 237/493 (48%), Gaps = 36/493 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++ +FC   ++  A  ++  + +    PD      LI+GL    +I +A  +   M
Sbjct: 111 TLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKM 170

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD + Y  ++ GLCK G   +AI LL  M    C+PDV+ Y T++ ++  + + 
Sbjct: 171 IWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQ 230

Query: 239 KQAIGFWKDQLRKGCPPYLIT-----------------------------------YTIL 263
            QA   + + + KG  P ++T                                    T +
Sbjct: 231 TQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTV 290

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           ++ +CK+  +A+A +V+D M   G  PD+VTY +L++  C + + D+AV V + ++ +G 
Sbjct: 291 VDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGC 350

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN  +YNTL++        D    + + M      P   TYN LI+GLC  G +  AI 
Sbjct: 351 APNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIA 410

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +MV+    PD+VTY  +L  LCK   L++A+ LL  + GS+  P +  Y  +IDG+ 
Sbjct: 411 LFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTIVIDGMC 470

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           + G +E A  L+  +   G+ P+  T+  +  G C+   ++EA  L  E+ +        
Sbjct: 471 RAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGC 530

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE-EAYKLWQK 562
            Y  +  G  ++ +   AIQ+LE M++  +  D +  + +V  ++DDG+ + EA+KL   
Sbjct: 531 TYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDDGLDQSEAHKLEDM 590

Query: 563 LIEWKVFEKGTTL 575
               ++  K T  
Sbjct: 591 FPHLRIQVKDTVF 603



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 220/427 (51%), Gaps = 1/427 (0%)

Query: 149 IPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI 207
           IP   + +N LI     ++R+  A  VL  ++  G  PDT ++  ++ GLC  GQI  A+
Sbjct: 105 IPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEAL 164

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
            L D+M   G +PDV+ Y T++  +   G    AI   +   +  C P ++ Y  LI  +
Sbjct: 165 HLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSL 224

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CK     +A  +  +M  +G SP+IVT NSLV   C  G++     ++N ++   + PN+
Sbjct: 225 CKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNA 284

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           I+  T++ +L   G       ++D+M ++   P V TY  LI+G C    +D A+  F+ 
Sbjct: 285 ISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDM 344

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           MV K C P++ +YNT++   CK   +++A+ L   +      P  +TYNTLI GL   G 
Sbjct: 345 MVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGR 404

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           ++ A+ L+ +M+  G  PD +T+R L+   C+   +++A+ LLK I           Y +
Sbjct: 405 LQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDKAMALLKAIEGSNLDPDIQIYTI 464

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           VI G+C++ +++ A  +   + S   KP+   ++ +   +   G+ +EA KL+ ++ E  
Sbjct: 465 VIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENA 524

Query: 568 VFEKGTT 574
               G T
Sbjct: 525 CSADGCT 531



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/463 (26%), Positives = 243/463 (52%), Gaps = 12/463 (2%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           S+PS   PF+      +N+    +     L DA    + M   +  P     ++  + L 
Sbjct: 32  SIPS---PFLS---LLHNRFRSKYLHFNTLDDALSSFNRMLHMHPPPSI---VDFAKILT 82

Query: 164 RIDRIEKASKVLQI--MVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
            I ++++ S VL +   + S G+P  + T N+++   C   ++  A ++L ++   GC+P
Sbjct: 83  SITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSVLAKILKLGCQP 142

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D  ++ T+++ +   G+  +A+  +   + +G  P ++ Y  LI  +CK    + AI +L
Sbjct: 143 DTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCKTGHTSAAIRLL 202

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
             M    C PD+V Y +L++  CK  +   A  + + ++++G+ PN +T N+L+++L + 
Sbjct: 203 RSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVTCNSLVYALCNL 262

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G W  V+ +L+ M ++   P   +   +++ LCK G+V +A +  + M     +PD+VTY
Sbjct: 263 GEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMFQSGVEPDVVTY 322

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             ++   C    ++EA+++  ++    C+P + +YNTLI+G  K   M+KAM L+ +M  
Sbjct: 323 TALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAMYLFEEMCR 382

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
             + P+ +T+ TLI G C   ++++A+ L +E+   G       YR+++  LCK+  +D 
Sbjct: 383 QKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYRILLDYLCKNCHLDK 442

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           A+ +L+ +  S   PD  +++ ++  +   G  E+A  L+  L
Sbjct: 443 AMALLKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNL 485



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 90/345 (26%), Positives = 176/345 (51%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P ++ +  IL ++    ++   +   +     G P  + T  +LI   C    +  A  V
Sbjct: 72  PSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYTLNVLINSFCHLNRVNFAFSV 131

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L  +   GC PD  ++ +L+   C +G+  +A+ + + ++  G +P+ + Y TL++ L  
Sbjct: 132 LAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMIWEGFQPDVVIYATLINGLCK 191

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G   A  ++L  M + +  P V  Y  LI+ LCK     +A N F++M++K   P+IVT
Sbjct: 192 TGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQTQAFNLFSEMITKGISPNIVT 251

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
            N+++ ALC  G       LL+ +  S   P  I+  T++D L K+G + +A  +   M 
Sbjct: 252 CNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISLTTVVDALCKEGMVAQAHDVVDMMF 311

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           ++G+ PD +T+  LI G C   +++EAV +   +  +G      +Y  +I+G CK +++D
Sbjct: 312 QSGVEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMD 371

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            A+ + E M   +  P+   ++T++  +   G  ++A  L+++++
Sbjct: 372 KAMYLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMV 416



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 89/302 (29%), Positives = 148/302 (49%), Gaps = 39/302 (12%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T   ++   C R ++ +A K+ D+M  +   P+      LI G  +I+R++KA 
Sbjct: 315 VEPDVVTYTALIDGHCLRSEMDEAVKVFDMMVHKGCAPNVFSYNTLINGYCKIERMDKAM 374

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M     +P+T+TYN ++ GLC  G+++ AIAL  EM   G  PD++TY       
Sbjct: 375 YLFEEMCRQKLIPNTVTYNTLIHGLCHVGRLQDAIALFREMVACGQIPDLVTYR------ 428

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS--P 290
                                        IL++ +CK C + +A+ +L   AIEG +  P
Sbjct: 429 -----------------------------ILLDYLCKNCHLDKAMALLK--AIEGSNLDP 457

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           DI  Y  +++  C+ G+ +DA  + +NL S+G++PN  TYN + H L  RG  D   K+ 
Sbjct: 458 DIQIYTIVIDGMCRAGELEDARDLFSNLSSKGLKPNVWTYNIMTHGLCKRGLLDEATKLF 517

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M+E + S    TYN +  G  +     RAI    +M+++    D+ T   ++G L  +
Sbjct: 518 MEMDENACSADGCTYNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLVGMLSDD 577

Query: 411 GM 412
           G+
Sbjct: 578 GL 579



 Score = 81.6 bits (200), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 52/236 (22%), Positives = 106/236 (44%), Gaps = 3/236 (1%)

Query: 343 WDAVDKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
           ++ +D  L   N   H    P++  +  ++  + K       ++   +M S     ++ T
Sbjct: 52  FNTLDDALSSFNRMLHMHPPPSIVDFAKILTSITKVKRYSTVLSLSRKMDSFGIPHNVYT 111

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
            N ++ + C    +N A  +L  +    C P   ++ TLI GL  +G + +A+ L+ +M+
Sbjct: 112 LNVLINSFCHLNRVNFAFSVLAKILKLGCQPDTASFTTLIKGLCLEGQIGEALHLFDKMI 171

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
             G  PD + + TLI G C+      A+ LL+ + K   +     Y  +IH LCK ++  
Sbjct: 172 WEGFQPDVVIYATLINGLCKTGHTSAAIRLLRSMEKGNCQPDVVVYGTLIHSLCKDRQQT 231

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            A  +   MI+    P+    +++V  + + G  +    L  ++++ K+     +L
Sbjct: 232 QAFNLFSEMITKGISPNIVTCNSLVYALCNLGEWKHVNTLLNEMVDSKIMPNAISL 287



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 40/160 (25%), Positives = 64/160 (40%), Gaps = 35/160 (21%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L + +G  ++ D +    ++   C  G+L DA  L   ++ +                  
Sbjct: 447 LKAIEGSNLDPDIQIYTIVIDGMCRAGELEDARDLFSNLSSK------------------ 488

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
                            G  P+  TYN+M  GLCKRG +  A  L  EM  + C  D  T
Sbjct: 489 -----------------GLKPNVWTYNIMTHGLCKRGLLDEATKLFMEMDENACSADGCT 531

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           YNTI +    N +  +AI   ++ L +G    + T T+L+
Sbjct: 532 YNTITQGFLRNNETSRAIQLLEEMLARGFSCDVSTTTLLV 571


>gi|15237662|ref|NP_201237.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171655|sp|Q9FMF6.1|PP444_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g64320, mitochondrial; Flags: Precursor
 gi|9759408|dbj|BAB09863.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010486|gb|AED97869.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 730

 Score =  224 bits (572), Expect = 6e-56,   Method: Compositional matrix adjust.
 Identities = 134/437 (30%), Positives = 237/437 (54%), Gaps = 9/437 (2%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           ++ +A +L++ M     +PD     ++I GL + DRI +A+K++  M++ G  PD ITY 
Sbjct: 267 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYG 326

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            ++ GLCK G++ +A  L   +     +P+++ +NT++     +G+   A     D +  
Sbjct: 327 YLMNGLCKIGRVDAAKDLFYRIP----KPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 382

Query: 252 -GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P + TY  LI    K+  +  A+EVL DM  +GC P++ +Y  LV+  CK GK D+
Sbjct: 383 YGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDE 442

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  V+N + + G++PN++ +N L+ +           +I   M      P V+T+N LI+
Sbjct: 443 AYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 502

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH--LLNGSSC 428
           GLC+   +  A+     M+S+    + VTYNT++ A  + G + EA +L++  +  GS  
Sbjct: 503 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPL 562

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
               ITYN+LI GL + G ++KA  L+ +M+ +G +P +I+   LI G CR+  VEEAV+
Sbjct: 563 DE--ITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVE 620

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
             KE+  RG+      +  +I+GLC++ +++  + +   + +    PD   F+T++  + 
Sbjct: 621 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLC 680

Query: 549 DDGMTEEAYKLWQKLIE 565
             G   +A  L  + IE
Sbjct: 681 KGGFVYDACLLLDEGIE 697



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 126/442 (28%), Positives = 230/442 (52%), Gaps = 5/442 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ FC+  ++  A  L+  M +   +P+      LI  L + +R+ +A ++L+ M + G
Sbjct: 223 VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 282

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD  T+N ++ GLCK  +I  A  +++ M + G  PD ITY  ++  +   G+   A 
Sbjct: 283 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAA- 341

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNF 301
              KD   +   P ++ +  LI        +  A  VL DM    G  PD+ TYNSL+  
Sbjct: 342 ---KDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 398

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             K+G    A+ V++++ ++G +PN  +Y  L+      G  D    +L+ M+     P 
Sbjct: 399 YWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPN 458

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
              +N LI+  CK   +  A+  F +M  K C+PD+ T+N+++  LC+   +  AL LL 
Sbjct: 459 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 518

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +         +TYNTLI+   ++G +++A  L  +M+  G   D+IT+ +LI G CRA 
Sbjct: 519 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAG 578

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V++A  L +++ + G+   N +  ++I+GLC+S  V+ A++  + M+     PD   F+
Sbjct: 579 EVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 638

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
           +++  +   G  E+   +++KL
Sbjct: 639 SLINGLCRAGRIEDGLTMFRKL 660



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 229/430 (53%), Gaps = 6/430 (1%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A+   D+++R+     F F + +++    ++ I+ A  +L+ M   G VP+++ Y  ++ 
Sbjct: 202 ANVFYDMLSRKIPPTLFTFGV-VMKAFCAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIH 260

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
            L K  ++  A+ LL+EM + GC PD  T+N ++  +    +  +A       L +G  P
Sbjct: 261 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFAP 320

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
             ITY  L+  +CK   I R ++   D+      P+IV +N+L++     G+ DDA  V+
Sbjct: 321 DDITYGYLMNGLCK---IGR-VDAAKDLFYRIPKPEIVIFNTLIHGFVTHGRLDDAKAVL 376

Query: 316 NNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           ++++ S G+ P+  TYN+L++     G      ++L  M      P V++Y IL++G CK
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G +D A N  N+M +   +P+ V +N ++ A CKE  + EA+++   +    C P + T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           +N+LI GL +   ++ A+ L   M+  G+  + +T+ TLI  F R  +++EA  L+ E+ 
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
            +G+ +    Y  +I GLC++ +VD A  + E M+   + P +   + ++  +   GM E
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616

Query: 555 EAYKLWQKLI 564
           EA +  ++++
Sbjct: 617 EAVEFQKEMV 626



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/405 (29%), Positives = 212/405 (52%), Gaps = 5/405 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T   ++   C  G++ DA+K  D+  R  + P+      LI G +   R++ A  VL
Sbjct: 321 DDITYGYLMNGLCKIGRV-DAAK--DLFYRIPK-PEIVIFNTLIHGFVTHGRLDDAKAVL 376

Query: 176 QIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             MV S G VPD  TYN ++ G  K G +  A+ +L +M   GC+P+V +Y  ++     
Sbjct: 377 SDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDMRNKGCKPNVYSYTILVDGFCK 436

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK  +A     +    G  P  + +  LI   CK+  I  A+E+  +M  +GC PD+ T
Sbjct: 437 LGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 496

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +NSL++  C+  +   A+ ++ +++S G+  N++TYNTL+++   RG      K+++ M 
Sbjct: 497 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 556

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                    TYN LI GLC+ G VD+A + F +M+     P  ++ N ++  LC+ GM+ 
Sbjct: 557 FQGSPLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGHAPSNISCNILINGLCRSGMVE 616

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA++    +     +P ++T+N+LI+GL + G +E  + ++ ++   GI PD +T  TL+
Sbjct: 617 EAVEFQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLM 676

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
              C+   V +A  LL E  + G    +  + +++  +   + +D
Sbjct: 677 SWLCKGGFVYDACLLLDEGIEDGFVPNHRTWSILLQSIIPQETLD 721



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 194/381 (50%), Gaps = 5/381 (1%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P   +YN+++  L      + A  +  +M      P + T+  +++      +   A+  
Sbjct: 180 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALSL 239

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            +D  + GC P  + Y  LI  + K   +  A+++L++M + GC PD  T+N ++   CK
Sbjct: 240 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 299

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             + ++A  ++N +L RG  P+ ITY  L++ L   G  DA   +   + +    P +  
Sbjct: 300 FDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PEIVI 355

Query: 365 YNILINGLCKYGLVDRAINSFNQMV-SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           +N LI+G   +G +D A    + MV S    PD+ TYN+++    KEG++  AL++LH +
Sbjct: 356 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHDM 415

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
               C P + +Y  L+DG  K G +++A  +  +M  +G+ P+ +    LI  FC+  ++
Sbjct: 416 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNVLNEMSADGLKPNTVGFNCLISAFCKEHRI 475

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            EAV++ +E+ ++G K     +  +I GLC+  ++  A+ +L  MIS     +   ++T+
Sbjct: 476 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 535

Query: 544 VKKVADDGMTEEAYKLWQKLI 564
           +      G  +EA KL  +++
Sbjct: 536 INAFLRRGEIKEARKLVNEMV 556



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 83/261 (31%), Positives = 145/261 (55%), Gaps = 2/261 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC   ++ +A ++   M R+   PD +   +LI GL  +D I+ A  +L+ M+ 
Sbjct: 463 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 522

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G V +T+TYN ++    +RG+I+ A  L++EM   G   D ITYN++++ +   G+  +
Sbjct: 523 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSPLDEITYNSLIKGLCRAGEVDK 582

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   ++  LR G  P  I+  ILI  +C+   +  A+E   +M + G +PDIVT+NSL+N
Sbjct: 583 ARSLFEKMLRDGHAPSNISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 642

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHS 359
             C+ G+ +D + +   L + G+ P+++T+NTL+  L   G  +DA   +LD   E    
Sbjct: 643 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTFNTLMSWLCKGGFVYDAC-LLLDEGIEDGFV 701

Query: 360 PTVFTYNILINGLCKYGLVDR 380
           P   T++IL+  +     +DR
Sbjct: 702 PNHRTWSILLQSIIPQETLDR 722



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 70/241 (29%), Positives = 117/241 (48%), Gaps = 5/241 (2%)

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           EP   +YN +L  L S  C      +   M      PT+FT+ +++   C    +D A++
Sbjct: 179 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFCAVNEIDSALS 238

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               M    C P+ V Y T++ +L K   +NEALQLL  +    C P   T+N +I GL 
Sbjct: 239 LLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 298

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K   + +A  +  +M+  G +PDDIT+  L+ G C+  +V+ A DL   I K    + N+
Sbjct: 299 KFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPEIVIFNT 358

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSR-YKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
               +IHG     ++D A  VL  M++S    PD   +++++     +G+   A ++   
Sbjct: 359 ----LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKEGLVGLALEVLHD 414

Query: 563 L 563
           +
Sbjct: 415 M 415



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 55/241 (22%), Positives = 108/241 (44%), Gaps = 11/241 (4%)

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY------GLVDRAI 382
            Y  L+  LG+ G +  +D++L  M +      VF  ++ I+ +  Y      G   R +
Sbjct: 113 VYQVLIGKLGANGEFKTIDRLLIQMKDEG---IVFKESLFISIMRDYDKAGFPGQTTRLM 169

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                + S  C+P   +YN VL  L        A  + + +      P L T+  ++   
Sbjct: 170 LEMRNVYS--CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAF 227

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
                ++ A+ L   M ++G  P+ + ++TLI    + ++V EA+ LL+E+   G     
Sbjct: 228 CAVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDA 287

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             +  VI GLCK  +++ A +++  M+   + PDD  +  ++  +   G  + A  L+ +
Sbjct: 288 ETFNDVILGLCKFDRINEAAKMVNRMLIRGFAPDDITYGYLMNGLCKIGRVDAAKDLFYR 347

Query: 563 L 563
           +
Sbjct: 348 I 348



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 38/146 (26%), Positives = 73/146 (50%)

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L + N  SC P   +YN +++ L    C + A  ++  M+   I P   T   ++  FC
Sbjct: 169 MLEMRNVYSCEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKAFC 228

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
             ++++ A+ LL+++ K G    +  Y+ +IH L K  +V+ A+Q+LE M      PD  
Sbjct: 229 AVNEIDSALSLLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAE 288

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            F+ ++  +       EA K+  +++
Sbjct: 289 TFNDVILGLCKFDRINEAAKMVNRML 314


>gi|357121285|ref|XP_003562351.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 624

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 157/599 (26%), Positives = 275/599 (45%), Gaps = 127/599 (21%)

Query: 97  TKKSHDPSLPSSDGPFVENDEKTN------NKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           TK    P+   S    V  D          + ++++ C  G+  DA + +D       + 
Sbjct: 26  TKPKPAPATSISTAATVSADTAVGGGSGRLSALIRSLCVAGRTADAVRALDAAGNAAGVV 85

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D++    ++ G  R+ ++E A ++   + +    P+  TY  +V GLC RG+I  A+A+L
Sbjct: 86  DYN---AMVAGYCRVGQVEAARRLAAAVPVP---PNAYTYFPVVRGLCGRGRIADALAVL 139

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK------------------------ 246
           DEM+   C P    Y+ I+ +   +G +  A+   +                        
Sbjct: 140 DEMTSRSCVPIPPMYHVIIESACRSGGYSSALRVLEALHAKGSTLDTGNCNLVINAICDQ 199

Query: 247 -------DQLRK----GCPPYLITYTILIEQVC--KQCG--------IARAIEVLDDMAI 285
                  + LRK    GC   +++Y  +++ +C  K+ G        + +  E L  MA 
Sbjct: 200 GCVDEGLEMLRKLPLFGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQ 259

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
            GC+PDI  Y ++++  CK+G ++ A  +++ + S G++PN + YNT+L  + S   W+ 
Sbjct: 260 HGCTPDIRMYATIIDGICKEGHHEVANEILSRMPSYGLKPNVVCYNTVLKGICSADRWEK 319

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
            +++L  M + +      T+NIL++  C+ GLVDR I    QM+   C PD++TY TV+ 
Sbjct: 320 AEELLTEMYQKNCPLDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVIN 379

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSP--------------------------------CL- 432
             CKEG+++EA+ LL  +    C P                                CL 
Sbjct: 380 GFCKEGLIDEAVMLLKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLP 439

Query: 433 --ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             +T+NT+I+ L KKG +E+A+ L  QM+ NG +PD I++ T+I G  +A + EEA++LL
Sbjct: 440 NPVTFNTIINFLCKKGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELL 499

Query: 491 KEIGKRG---------------------------------NKMRNSA--YRLVIHGLCKS 515
             +  +G                                   +R+ A  Y  VI  LCK 
Sbjct: 500 NVMINKGITPNVITYSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKR 559

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           ++ D+AI  L  M+S+   P+++ ++ ++K +A +G+  EA  L  +L   +   K  T
Sbjct: 560 RETDLAIDFLAYMVSNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAVRKHLT 618



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 198/407 (48%), Gaps = 14/407 (3%)

Query: 78  WSSESHVLAVNKKLRGLTITKKSHD------------PSLPSSDGPFVENDEKTNNKILQ 125
           +  E+ +++ N  L+GL   K+  D             +L          D +    I+ 
Sbjct: 215 FGCEADIVSYNAVLKGLCAAKRWGDVEELMDEMVKVHEALSQMAQHGCTPDIRMYATIID 274

Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMSGGV 184
             C  G    A++++  M      P+   C N +++G+   DR EKA ++L  M      
Sbjct: 275 GICKEGHHEVANEILSRMPSYGLKPNV-VCYNTVLKGICSADRWEKAEELLTEMYQKNCP 333

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
            D +T+N++V   C+ G +   I LL++M   GC PDVITY T++      G   +A+  
Sbjct: 334 LDDVTFNILVDFFCQNGLVDRVIELLEQMLEHGCMPDVITYTTVINGFCKEGLIDEAVML 393

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            K+    GC P  I+YTI+++ +C       A E++  M  +GC P+ VT+N+++NF CK
Sbjct: 394 LKNMPSCGCKPNTISYTIVLKGLCSTERWVDAEELMSRMIQQGCLPNPVTFNTIINFLCK 453

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           +G  + A+ ++  +L  G  P+ I+Y+T++  LG  G  +   ++L++M     +P V T
Sbjct: 454 KGLVEQAIELLKQMLVNGCNPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNVIT 513

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y+ +   L + G +D+ I  F+ +     + D V YN V+ +LCK    + A+  L  + 
Sbjct: 514 YSSMAFALAREGRIDKVIQMFDNIQDATIRSDAVLYNAVISSLCKRRETDLAIDFLAYMV 573

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            + C P   TY  LI GLA +G + +A  L  ++         +T R
Sbjct: 574 SNGCMPNESTYTALIKGLASEGLLCEAQDLLSELCSRRAVRKHLTRR 620


>gi|302767472|ref|XP_002967156.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
 gi|300165147|gb|EFJ31755.1| hypothetical protein SELMODRAFT_144844 [Selaginella moellendorffii]
          Length = 651

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 218/404 (53%), Gaps = 4/404 (0%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           MAR      F + I LIRG      ++ A ++L+ M  +G   + + +  ++ GLC  G+
Sbjct: 1   MARICMPNKFTYGI-LIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGR 59

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +  A+     M+   C PDV+TY  ++  +   GKF +A G  ++ + +GC P  +T++ 
Sbjct: 60  VVEALEHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFST 118

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC-KQGKYDDAVLVINNLLSR 321
           LI+ +CK     +A  VL+D+   G       + +++   C K    + A  V+  ++++
Sbjct: 119 LIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAK 178

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G  P  + +N +++        D+  K+L++M E    P VFT+ ILI GLCK   V  A
Sbjct: 179 GFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEA 238

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
                +MV+  C P++VTY+TV+  LCK+G +++A +L  L+   +C P ++T+N LIDG
Sbjct: 239 QQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDG 298

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L K   +E+A  LY +M E G +PD IT+ +LI G C++ QV+EA  L + I + G    
Sbjct: 299 LCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAA 358

Query: 502 NS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           N+  Y  + HG     ++  A ++  +++   + PD   +++++
Sbjct: 359 NAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYTSLI 402



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 232/454 (51%), Gaps = 5/454 (1%)

Query: 115 NDEKTNNKILQNFCSRGKLTD-ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           N +     I+Q  C++    + ASK++ ++  +   P       +I G  +   ++ A K
Sbjct: 146 NSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYK 205

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L++M+  G VP+  T+ +++ GLCK  ++  A  LL++M   GC P+V+TY+T++  + 
Sbjct: 206 LLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLC 265

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+   A   ++   R+ CPP ++T+ ILI+ +CK   I  A ++   M   GC+PDI+
Sbjct: 266 KQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDII 325

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGME-PNSITYNTLLHSLGSRGCWDAVDKILDI 352
           TYNSL++  CK  + D+A  +   +   G+   N++TY+TL H   + G      +I  +
Sbjct: 326 TYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSM 385

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + +   SP + TY  LI   CK       +    +M SK   P + T + VLG L +   
Sbjct: 386 LVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNH 445

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN---GISPDDIT 469
              A+QL   +    C+   + YN +++G+A+     KA+ +  Q+++      +P    
Sbjct: 446 TERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSA 505

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              L+   C+  + ++A  LL ++ +RG     S+Y  ++ GL + ++ D A QV E M+
Sbjct: 506 VDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWDEATQVFEAMV 565

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           S+   P+ +  + ++  +      ++AY+L Q++
Sbjct: 566 SAGPAPEISTVNVVISWLCSAAKVDDAYELVQRM 599



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 126/492 (25%), Positives = 236/492 (47%), Gaps = 41/492 (8%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +   +  +++  C  G++ +A +    MA+ +  PD      L+  L +  + ++A  
Sbjct: 41  EGNAVVHTTLMKGLCDAGRVVEALEHFRAMAK-DCAPDVMTYTALVHALCKAGKFDEAQG 99

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ M+  G  PDT+T++ ++ GLCK G    A  +L+++   G       + TI++ + 
Sbjct: 100 MLREMIARGCAPDTVTFSTLIDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLC 159

Query: 234 DN-GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           +     + A       + KG  P ++ + ++I   CK   +  A ++L+ M  +GC P++
Sbjct: 160 NKYNSVELASKVLGVVIAKGFTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNV 219

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+  L+   CK  +  +A  ++  +++ G  PN +TY+T+++ L  +G  D   ++  +
Sbjct: 220 FTFTILITGLCKANRVGEAQQLLEKMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQL 279

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M   +  P V T+NILI+GLCK   ++ A   +++M    C PDI+TYN+++  LCK   
Sbjct: 280 MERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQ 339

Query: 413 LNEALQLLHLLNGSSCSPC-LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           ++EA QL   +  S  S    +TY+TL  G A  G M  A  ++  +++ G SPD  T+ 
Sbjct: 340 VDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGRMADACRIFSMLVDKGFSPDLATYT 399

Query: 472 TLIWGFCR-----------------------------------ADQVEEAVDLLKEIGKR 496
           +LI  +C+                                    +  E A+ L   +  R
Sbjct: 400 SLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSAVLGGLFEGNHTERAIQLFDSMAAR 459

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR---YKPDDTVFSTIVKKVADDGMT 553
           G       Y LV+ G+ ++ K + A+ VLE +I  R   + P  +    +V+ +   G T
Sbjct: 460 GCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKRDRKFNPSSSAVDALVESLCQVGRT 519

Query: 554 EEAYKLWQKLIE 565
           ++A +L  K+ E
Sbjct: 520 DDAKQLLHKMSE 531



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 182/394 (46%), Gaps = 39/394 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C +G++ DA +L  +M RRN  P+      LI GL +  RIE+A ++   M
Sbjct: 256 TYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAKRIEEARQLYHRM 315

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP-DVITYNTILRTMFDNGK 237
             +G  PD ITYN ++ GLCK  Q+  A  L   +  SG    + +TY+T+       G+
Sbjct: 316 RETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGVSAANAVTYSTLFHGYAALGR 375

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC-------------------------- 271
              A   +   + KG  P L TYT LI + CK                            
Sbjct: 376 MADACRIFSMLVDKGFSPDLATYTSLILEYCKTSRAVEVVELVEEMASKGFPPRVNTLSA 435

Query: 272 ---------GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS-- 320
                       RAI++ D MA  GC+ D + YN +V    +  K++ A+ V+  ++   
Sbjct: 436 VLGGLFEGNHTERAIQLFDSMAARGCTDDALIYNLVVEGMARASKHNKALAVLEQVIDKR 495

Query: 321 -RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            R   P+S   + L+ SL   G  D   ++L  M+E   +  V +YN L++GL +    D
Sbjct: 496 DRKFNPSSSAVDALVESLCQVGRTDDAKQLLHKMSERGFAAAVSSYNGLLSGLSRLQRWD 555

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A   F  MVS    P+I T N V+  LC    +++A +L+  ++   C P + T NTLI
Sbjct: 556 EATQVFEAMVSAGPAPEISTVNVVISWLCSAAKVDDAYELVQRMSKLGCCPDIETCNTLI 615

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            G  K G  + A  L  +M E G+ P+D TH  L
Sbjct: 616 GGYCKSGRADLARKLLEEMTEAGLEPNDTTHDLL 649



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 96/352 (27%), Positives = 185/352 (52%), Gaps = 2/352 (0%)

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C P+  TY  ++R     G    AI   ++    G     + +T L++ +C    +  A+
Sbjct: 5   CMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRVVEAL 64

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E    MA + C+PD++TY +LV+  CK GK+D+A  ++  +++RG  P+++T++TL+  L
Sbjct: 65  EHFRAMA-KDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTLIDGL 123

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC-KYGLVDRAINSFNQMVSKNCQPD 396
              G  +   ++L+ + +     +   +  +I  LC KY  V+ A      +++K   P 
Sbjct: 124 CKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKGFTPT 183

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           ++ +N V+   CK   L+ A +LL ++    C P + T+  LI GL K   + +A  L  
Sbjct: 184 VLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQQLLE 243

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M+  G SP+ +T+ T+I G C+  QV++A +L + + +R        + ++I GLCK+K
Sbjct: 244 KMVTGGCSPNVVTYSTVINGLCKQGQVDDAYELFQLMERRNCPPNVVTHNILIDGLCKAK 303

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +++ A Q+   M  +   PD   +++++  +      +EA++L+Q + E  V
Sbjct: 304 RIEEARQLYHRMRETGCAPDIITYNSLIDGLCKSFQVDEAFQLFQTIPESGV 355



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 76/247 (30%), Positives = 126/247 (51%), Gaps = 2/247 (0%)

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           ++R   PN  TY  L+    S G  D   ++L+ M           +  L+ GLC  G V
Sbjct: 1   MARICMPNKFTYGILIRGFSSAGDLDIAIQLLEEMKSNGFEGNAVVHTTLMKGLCDAGRV 60

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A+  F  M +K+C PD++TY  ++ ALCK G  +EA  +L  +    C+P  +T++TL
Sbjct: 61  VEALEHFRAM-AKDCAPDVMTYTALVHALCKAGKFDEAQGMLREMIARGCAPDTVTFSTL 119

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC-RADQVEEAVDLLKEIGKRG 497
           IDGL K G  E+A  +   +++ G+   D    T+I   C + + VE A  +L  +  +G
Sbjct: 120 IDGLCKFGSEEQAFRVLEDVIQRGMGNSDAAFETIIQRLCNKYNSVELASKVLGVVIAKG 179

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  + LVI+G CK+K +D A ++LE+MI     P+   F+ ++  +       EA 
Sbjct: 180 FTPTVLMFNLVINGFCKAKDLDSAYKLLEVMIEKGCVPNVFTFTILITGLCKANRVGEAQ 239

Query: 558 KLWQKLI 564
           +L +K++
Sbjct: 240 QLLEKMV 246


>gi|449531171|ref|XP_004172561.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 761

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 129/413 (31%), Positives = 224/413 (54%), Gaps = 14/413 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC  GK   A  L + M      PD      LI  L +  ++ +A+K+L++++  G
Sbjct: 343 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 402

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD +T   +V GLC + +I  A  L  +M   GC P+V+T  T+++ +  +G  K A+
Sbjct: 403 CIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL 462

Query: 243 GFWKDQLRK------GCPPYLITYTILIEQVCKQCGIA-RAIEVLDDMAIEGCSPDIVTY 295
              K+ L         C P  I+Y+I+I+ +CK CG    A E+  +M   G  PD+++Y
Sbjct: 463 ELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK-CGREDEARELFKEMKALGVIPDVISY 521

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            SL++  C+ GK+ DA  + N ++  G++P+  T++ L+  L   G     +++L++M +
Sbjct: 522 TSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 581

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TY  L+ GLC    +  A   F +M    C PD+VTY T++  LC+ G +  
Sbjct: 582 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKT 641

Query: 416 ALQLLHLL------NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           AL+L   +       G++  P +I+Y+ +IDGL K G  ++A  L+ +M   G+ P+ I+
Sbjct: 642 ALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVIS 701

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + +LI GFCR+ ++E+A  L  E+  +G ++    Y ++IHG CK  ++D A+
Sbjct: 702 YTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 754



 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 137/453 (30%), Positives = 242/453 (53%), Gaps = 12/453 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC  GK   A  L + M       D      LI  L +  ++ +A+++L++M+  G
Sbjct: 162 LIHGFCRSGKWEKAKCLFNEMLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRG 221

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            + D +TY+ ++ GLC + +I  A  L   M   GC PD I Y T+++ +   G    A+
Sbjct: 222 CILDIVTYSTLIKGLCMKHRISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTAL 281

Query: 243 GFWKDQL----RKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
              ++ L    R G  C P LI+Y+I+I+ +CK      A E+  +M  +G  PD+++Y 
Sbjct: 282 QLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYT 341

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L++  C  GK++ A  + N +L  G++P+  T + L+  L  +G     +K+L+++ + 
Sbjct: 342 TLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQR 401

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P V T   L+ GLC    + +A   F +M    C P++VT  T++  LC+ G +  A
Sbjct: 402 GCIPDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIA 461

Query: 417 LQL-LHLLNGSS-----CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           L+L  ++L+ +S     C P  I+Y+ +IDGL K G  ++A  L+ +M   G+ PD I++
Sbjct: 462 LELHKNMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISY 521

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +LI GFCR+ + ++A  L  E+   G +   + + ++I  LCK  KV  A ++LE+MI 
Sbjct: 522 TSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 581

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
               P+   ++T+VK +  +    EA +L+ K+
Sbjct: 582 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKM 614



 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 133/426 (31%), Positives = 223/426 (52%), Gaps = 12/426 (2%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD      LI    +  ++ +A+++L++MV  G + D +TY+ ++ GLC + +I  A  L
Sbjct: 8   PDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEATQL 67

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG------CPPYLITYTIL 263
              M   GC PD I Y T+++ +   GK   A+   ++ L         C P L++Y+I+
Sbjct: 68  FMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYSII 127

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+ +CK      A E+  +M  +G  PD+++Y SL++  C+ GK++ A  + N +L  G+
Sbjct: 128 IDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDVGI 187

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             +  T + L+  L   G     +++L++M +      + TY+ LI GLC    +  A  
Sbjct: 188 RSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEATR 247

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-LLN-----GSSCSPCLITYNT 437
            F  M    C+PD + Y T++  LC+ G +N ALQL   +LN     G  C P LI+Y+ 
Sbjct: 248 LFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYSI 307

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +IDGL K    ++A  L+ +M   GI PD I++ TLI GFC + + E+A  L  E+   G
Sbjct: 308 IIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 367

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            +   +   ++I  LCK  KV  A ++LE++I     PD    +T+VK +       +A 
Sbjct: 368 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKAT 427

Query: 558 KLWQKL 563
           +L+ K+
Sbjct: 428 QLFLKM 433



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 237/464 (51%), Gaps = 12/464 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  T++ ++   C  GK+ +A++L+++M +R  I D      LI+GL    RI +A+
Sbjct: 187 IRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEAT 246

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSG-----CEPDVITYN 226
           ++   M   G  PD I Y  ++ GLC+ G I +A+ L  EM + +G     C+P +I+Y+
Sbjct: 247 RLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISYS 306

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            I+  +  + +  +A   +K+   +G  P +I+YT LI   C      +A  + ++M   
Sbjct: 307 IIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 366

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G  PD+ T + L++  CK+GK  +A  ++  ++ RG  P+ +T  TL+  L  +      
Sbjct: 367 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKA 426

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK------NCQPDIVTY 400
            ++   M +    P V T   L+ GLC+ G +  A+     M+S       NC+P+ ++Y
Sbjct: 427 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISY 486

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           + ++  LCK G  +EA +L   +      P +I+Y +LI G  + G  + A  L+ +M++
Sbjct: 487 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 546

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G+ PD  T   LI   C+  +V EA +LL+ + +RG       Y  ++ GLC + ++  
Sbjct: 547 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE 606

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           A Q+   M      PD   + T++K +   G  + A +L +K++
Sbjct: 607 ATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKML 650



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 229/453 (50%), Gaps = 14/453 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+   C   +  +A +L   M  +  +PD      LI G     + EKA  +   M+  G
Sbjct: 308 IIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 367

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  T ++++  LCK+G++  A  LL+ +   GC PDV+T  T+++ +    +  +A 
Sbjct: 368 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISKAT 427

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV----LDDMAIEG--CSPDIVTYN 296
             +    + GC P ++T   L++ +C+   I  A+E+    L D +  G  C P+ ++Y+
Sbjct: 428 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 487

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            +++  CK G+ D+A  +   + + G+ P+ I+Y +L+H     G W     + + M + 
Sbjct: 488 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 547

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P V T+++LI+ LCK G V  A      M+ + C P+ VTY T++  LC    ++EA
Sbjct: 548 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 607

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN------GISPDDITH 470
            QL   +    C P ++TY TL+ GL + G ++ A+ L+ +M+ +         PD I++
Sbjct: 608 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 667

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             +I G C+  + +EA +L KE+   G      +Y  +IHG C+S K++ A  +   M+ 
Sbjct: 668 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 727

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              + +   +S ++     +G  ++A  L+QK+
Sbjct: 728 QGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 758



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 140/576 (24%), Positives = 249/576 (43%), Gaps = 123/576 (21%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T+  ++  FC  GK+ +A++L+++M +R  I D      LI+GL    RI +A+
Sbjct: 6   IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRISEAT 65

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI------------------------- 207
           ++   M   G  PD I Y  ++ GLC+ G+I  A+                         
Sbjct: 66  QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTLVSYS 125

Query: 208 ----------------ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA---------I 242
                            L  EM   G  PDVI+Y +++     +GK+++A         +
Sbjct: 126 IIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNEMLDV 185

Query: 243 GFWKD--------------------------QLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G   D                           +++GC   ++TY+ LI+ +C +  I+ A
Sbjct: 186 GIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHRISEA 245

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQG------------------------------ 306
             +   M   GC PD + Y +L+   C+ G                              
Sbjct: 246 TRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPTLISY 305

Query: 307 -----------KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
                      + D+A  +   + ++G+ P+ I+Y TL+H     G W+    + + M +
Sbjct: 306 SIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLD 365

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V T ++LI+ LCK G V  A      ++ + C PD+VT  T++  LC +  +++
Sbjct: 366 VGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCIPDVVTCTTLVKGLCMKHRISK 425

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN----GIS--PDDIT 469
           A QL   +    C P ++T  TL+ GL + G ++ A+ L+  M+ +    GI+  P+ I+
Sbjct: 426 ATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAIS 485

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  +I G C+  + +EA +L KE+   G      +Y  +IHG C+S K   A  +   M+
Sbjct: 486 YSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMV 545

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               +PD T FS ++  +  +G   EA +L + +I+
Sbjct: 546 DIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 581



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 102/373 (27%), Positives = 182/373 (48%), Gaps = 47/373 (12%)

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           L  G  P + T  +LI+  CK+  +  A E+L+ M   GC  DIVTY++L+   C + + 
Sbjct: 2   LHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHRI 61

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILDIMNEASH-----SPTV 362
            +A  +  ++   G  P++I Y TL+  L   G  + A+    +++N+ S       PT+
Sbjct: 62  SEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPTL 121

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA---------------- 406
            +Y+I+I+GLCK    D A   F +M ++   PD+++Y +++                  
Sbjct: 122 VSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFNE 181

Query: 407 -------------------LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
                              LCKEG + EA +LL ++    C   ++TY+TLI GL  K  
Sbjct: 182 MLDVGIRSDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMKHR 241

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI----GKRGNKMRNS 503
           + +A  L+  M + G  PD I + TL+ G C+   +  A+ L +E+    G+ G K + +
Sbjct: 242 ISEATRLFMSMQKLGCRPDAIAYGTLMKGLCQTGNINTALQLHQEMLNDTGRYGIKCKPT 301

Query: 504 --AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             +Y ++I GLCK ++ D A ++ + M +    PD   ++T++      G  E+A  L+ 
Sbjct: 302 LISYSIIIDGLCKDRREDEARELFKEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFN 361

Query: 562 KLIEWKVFEKGTT 574
           ++++  +    TT
Sbjct: 362 EMLDVGIQPDVTT 374



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/193 (28%), Positives = 102/193 (52%), Gaps = 6/193 (3%)

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M+    QPD+ T   ++   CKEG + EA +LL ++    C   ++TY+TLI GL  K  
Sbjct: 1   MLHVGIQPDVTTSGVLIDMFCKEGKVIEANELLEVMVQRGCILDIVTYSTLIKGLCMKHR 60

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI----GKRGNKMRNS 503
           + +A  L+  M + G  PD I + TL+ G C+  ++  A+ L +E+     + G K + +
Sbjct: 61  ISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCKPT 120

Query: 504 --AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             +Y ++I GLCK ++ D A ++ + M +    PD   +++++      G  E+A  L+ 
Sbjct: 121 LVSYSIIIDGLCKDRREDEARELFKEMKAQGMMPDVISYTSLIHGFCRSGKWEKAKCLFN 180

Query: 562 KLIEWKVFEKGTT 574
           ++++  +    TT
Sbjct: 181 EMLDVGIRSDVTT 193


>gi|357116365|ref|XP_003559952.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Brachypodium distachyon]
          Length = 627

 Score =  224 bits (572), Expect = 7e-56,   Method: Compositional matrix adjust.
 Identities = 141/478 (29%), Positives = 250/478 (52%), Gaps = 13/478 (2%)

Query: 92  RGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK-LIDIMARRNQIP 150
           R L +      P+L SS  P V  D  + N +L   C +G   DA+  L+ +MA   + P
Sbjct: 55  RLLRLVPLPESPALLSSL-PSV-RDAVSYNTVLAALCRQGGCLDAALFLLRVMAHETR-P 111

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
                  L+R L    R  +A  +L+ M  SG  PD +TY  ++ GLC    +  A+ LL
Sbjct: 112 TAVSYTTLMRALCAERRTGQAVGLLRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELL 171

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
            EM  SG EP+V+ Y+ +L+     G+++     +++   +G  P ++ YT LI+ +C++
Sbjct: 172 REMCESGIEPNVVVYSCLLQGYCKAGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCRE 231

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             + +A +V+D M   G  P++VTYN L+N  CK+G   +A+ + NN+L +G+  +++TY
Sbjct: 232 GKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTY 291

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASH-----SPTVFTYNILINGLCKYGLVDRAINSF 385
           NTL+  L   G  + +D+ + ++ E  H      P V T+N +I+GLCK G + +A    
Sbjct: 292 NTLITGLS--GVLE-MDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQVR 348

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           + M    C  ++VT+N ++G L +   + +A++L+  +  S   P   TY+ LI+G  K 
Sbjct: 349 DMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFCKM 408

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             +++A  L  +M  +GI P+ + +  L+   C    +E+A +   E+ K   K+   AY
Sbjct: 409 WQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMHK-NCKLDVVAY 467

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             +IHG C+ +    A + L+ M+     PD   +S ++   A+ G    A ++ +++
Sbjct: 468 STMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQM 525



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 215/437 (49%), Gaps = 11/437 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   +++  C    +  A +L+  M      P+      L++G  +  R E  S
Sbjct: 144 VRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCKAGRWECVS 203

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KV + M   G  PD + Y  ++  LC+ G+++ A  ++D+M   G EP+V+TYN ++ +M
Sbjct: 204 KVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSM 263

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG---CS 289
              G  K+A+    + L KG     +TY  LI  +     +  A+ +L++M I G     
Sbjct: 264 CKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEM-IHGETMVE 322

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++VT+NS+++  CK G+   A  V + +   G   N +T+N L+  L        V K 
Sbjct: 323 PNVVTFNSVIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLR---VHKVKKA 379

Query: 350 LDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           +++M+E + S   P  FTY+ILING CK   VDRA +  ++M     +P++V Y  +L A
Sbjct: 380 MELMDEMASSGLEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAA 439

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LC++GM+ +A      ++  +C   ++ Y+T+I G  +    + A      M++ G+ PD
Sbjct: 440 LCEQGMMEQARNFFDEMH-KNCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPD 498

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+  LI  F  +  +  A  +LK++   G     + +  +I G       +  ++++ 
Sbjct: 499 SVTYSMLINMFANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIR 558

Query: 527 LMISSRYKPDDTVFSTI 543
            M +     D  + STI
Sbjct: 559 EMTAKDIALDSKIISTI 575



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 96/359 (26%), Positives = 175/359 (48%), Gaps = 3/359 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +E D      ++ + C  GK+  A++++D M  R   P+      LI  + +   ++
Sbjct: 211 GRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVTYNVLINSMCKEGSVK 270

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM--SVSGCEPDVITYNT 227
           +A  +   M+  G   D +TYN ++ GL    ++  A+ LL+EM    +  EP+V+T+N+
Sbjct: 271 EAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNS 330

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +   G+ +QA          GC   L+T+ +LI  + +   + +A+E++D+MA  G
Sbjct: 331 VIHGLCKTGRMRQAFQVRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSG 390

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD  TY+ L+N  CK  + D A  +++ +   G+EP  + Y  LL +L  +G  +   
Sbjct: 391 LEPDSFTYSILINGFCKMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQAR 450

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
              D M++ +    V  Y+ +I+G C+      A      M+ +   PD VTY+ ++   
Sbjct: 451 NFFDEMHK-NCKLDVVAYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMF 509

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
              G L  A ++L  +  S   P +  +++LI G   KG  EK + L  +M    I+ D
Sbjct: 510 ANSGDLGAAERVLKQMTASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALD 568



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 153/312 (49%), Gaps = 6/312 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASK 173
           D  T N ++       ++ +A  L++ M     +  P+     ++I GL +  R+ +A +
Sbjct: 287 DAVTYNTLITGLSGVLEMDEAMGLLEEMIHGETMVEPNVVTFNSVIHGLCKTGRMRQAFQ 346

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V  +M  +G   + +T+N+++GGL +  +++ A+ L+DEM+ SG EPD  TY+ ++    
Sbjct: 347 VRDMMAENGCACNLVTFNLLIGGLLRVHKVKKAMELMDEMASSGLEPDSFTYSILINGFC 406

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              +  +A        R G  P L+ Y  L+  +C+Q  + +A    D+M  + C  D+V
Sbjct: 407 KMWQVDRAESLLSKMRRDGIEPELVHYIPLLAALCEQGMMEQARNFFDEMH-KNCKLDVV 465

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y+++++ +C+      A   + ++L  G+ P+S+TY+ L++   + G   A +++L  M
Sbjct: 466 AYSTMIHGACRLRDRKSAEEFLKHMLDEGLIPDSVTYSMLINMFANSGDLGAAERVLKQM 525

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
             +   P V  ++ LI G    G  ++ +    +M +K+   D    +T+   L      
Sbjct: 526 TASGFVPDVAVFDSLIKGYGAKGDTEKVLELIREMTAKDIALDSKIISTIYTCLVAN--- 582

Query: 414 NEALQLLHLLNG 425
           NE   LL  + G
Sbjct: 583 NEGKALLQSVPG 594



 Score =  108 bits (271), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/245 (26%), Positives = 125/245 (51%), Gaps = 2/245 (0%)

Query: 326 NSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           ++++YNT+L +L  +G C DA   +L +M   +  PT  +Y  L+  LC      +A+  
Sbjct: 77  DAVSYNTVLAALCRQGGCLDAALFLLRVMAHETR-PTAVSYTTLMRALCAERRTGQAVGL 135

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
              M +   +PD+VTY T++  LC    +++A++LL  +  S   P ++ Y+ L+ G  K
Sbjct: 136 LRDMQASGVRPDVVTYGTLIRGLCDAADVDKAVELLREMCESGIEPNVVVYSCLLQGYCK 195

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G  E    ++ +M   GI PD + +  LI   CR  +V++A  ++ ++ +RG +     
Sbjct: 196 AGRWECVSKVFEEMSGRGIEPDVVMYTGLIDSLCREGKVKKATQVMDKMMERGLEPNVVT 255

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y ++I+ +CK   V  A+ +   M+      D   ++T++  ++     +EA  L +++I
Sbjct: 256 YNVLINSMCKEGSVKEAMSLRNNMLEKGVALDAVTYNTLITGLSGVLEMDEAMGLLEEMI 315

Query: 565 EWKVF 569
             +  
Sbjct: 316 HGETM 320


>gi|356529465|ref|XP_003533312.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  224 bits (572), Expect = 8e-56,   Method: Compositional matrix adjust.
 Identities = 133/452 (29%), Positives = 240/452 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  FC  G++T    ++  + +R   PD      LI+GL    +++KA 
Sbjct: 90  IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL 149

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                ++  G   + ++Y  ++ G+CK G  R+AI  L ++     +PDV+ YNTI+  M
Sbjct: 150 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAM 209

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                  +A G + +   KG    ++TY  LI   C    +  AI +L++M ++  +P++
Sbjct: 210 CKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNV 269

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN LV+  CK+GK  +A  V+  +L   ++P+ ITY+TL+              + + 
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+    +P V TY ILING CK  +VD A+N F +M  KN  P IVTY++++  LCK G 
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++    L+  +        +ITY++LIDGL K G +++A+ L+ +M +  I P+  T   
Sbjct: 390 ISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++++A ++ +++  +G  +    Y ++I+G CK   ++ A+ +L  M  + 
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+   F TI+  +      ++A KL +++I
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQMI 541



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 225/443 (50%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           NKIL +F      + A  L   +  +   PD      LI     + +I     VL  ++ 
Sbjct: 63  NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILK 122

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PDT+T N ++ GLC +GQ++ A+   D++   G + + ++Y T++  +   G  + 
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRA 182

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI F +    +   P ++ Y  +I+ +CK   ++ A  +  +MA++G S D+VTYN+L+ 
Sbjct: 183 AIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIY 242

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  GK  +A+ ++N ++ + + PN  TYN L+ +L   G       +L +M +A   P
Sbjct: 243 GFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY+ L++G      V +A + FN M      PD+ TY  ++   CK  M++EAL L 
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++  +  P ++TY++LIDGL K G +     L  +M + G   D IT+ +LI G C+ 
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             ++ A+ L  ++  +  +     + +++ GLCK  ++  A +V + +++  Y  +   +
Sbjct: 423 GHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTY 482

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++      G+ EEA  +  K+
Sbjct: 483 NVMINGHCKQGLLEEALTMLSKM 505



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 205/418 (49%), Gaps = 37/418 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           D  T N +++  C +G++  A    D ++A+  Q+    +   LI G+ +I     A K 
Sbjct: 128 DTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA-TLINGVCKIGDTRAAIKF 186

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+ +      PD + YN ++  +CK   +  A  L  EM+V G   DV+TYNT++     
Sbjct: 187 LRKIDGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCI 246

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL-------------- 280
            GK K+AIG   + + K   P + TY IL++ +CK+  +  A  VL              
Sbjct: 247 VGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 281 ---------------------DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
                                + M++ G +PD+ TY  L+N  CK    D+A+ +   + 
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            + M P  +TY++L+  L   G    V  ++D M +      V TY+ LI+GLCK G +D
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           RAI  FN+M  +  +P+I T+  +L  LCK G L +A ++   L        + TYN +I
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +G  K+G +E+A+ +  +M +NG  P+  T  T+I    + D+ ++A  LL+++  RG
Sbjct: 487 NGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARG 544



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/385 (27%), Positives = 199/385 (51%)

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           + G  PD IT N+++   C  GQI    ++L ++   G  PD +T NT+++ +   G+ K
Sbjct: 87  LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVK 146

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A+ F    L +G     ++Y  LI  VCK      AI+ L  +      PD+V YN+++
Sbjct: 147 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTII 206

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK     +A  + + +  +G+  + +TYNTL++     G       +L+ M   + +
Sbjct: 207 DAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTIN 266

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P V+TYNIL++ LCK G V  A +    M+    +PD++TY+T++        + +A  +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            + ++    +P + TY  LI+G  K   +++A+ L+ +M +  + P  +T+ +LI G C+
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           + ++    DL+ E+  RG       Y  +I GLCK+  +D AI +   M     +P+   
Sbjct: 387 SGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLI 564
           F+ ++  +   G  ++A +++Q L+
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLL 471



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 202/405 (49%), Gaps = 2/405 (0%)

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           I  ++ A      M+     P  I +N ++    K     +A++L   + + G +PD+IT
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
            N ++      G+           L++G PP  +T   LI+ +C +  + +A+   D + 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +G   + V+Y +L+N  CK G    A+  +  +  R  +P+ + YNT++ ++       
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRAAIKFLRKIDGRLTKPDVVMYNTIIDAMCKYQLVS 216

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +   M     S  V TYN LI G C  G +  AI   N+MV K   P++ TYN ++
Sbjct: 217 EAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            ALCKEG + EA  +L ++  +   P +ITY+TL+DG      ++KA  ++  M   G++
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD  T+  LI GFC+   V+EA++L KE+ ++        Y  +I GLCKS ++     +
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 525 LELMISSRYKPDDTV-FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++ M   R +P D + +S+++  +  +G  + A  L+ K+ + ++
Sbjct: 397 IDEM-RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 182/355 (51%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG   + D    N I+   C    +++A  L   MA +    D      LI G   + ++
Sbjct: 191 DGRLTKPDVVMYNTIIDAMCKYQLVSEAYGLFSEMAVKGISADVVTYNTLIYGFCIVGKL 250

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           ++A  +L  MV+    P+  TYN++V  LCK G+++ A ++L  M  +  +PDVITY+T+
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTL 310

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +   F   + K+A   +      G  P + TYTILI   CK   +  A+ +  +M  +  
Sbjct: 311 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNM 370

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P IVTY+SL++  CK G+      +I+ +  RG   + ITY++L+  L   G  D    
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 430

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + + M +    P +FT+ IL++GLCK G +  A   F  +++K    ++ TYN ++   C
Sbjct: 431 LFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           K+G+L EAL +L  +  + C P   T+ T+I  L KK   +KA  L  QM+  G+
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545


>gi|242069877|ref|XP_002450215.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
 gi|241936058|gb|EES09203.1| hypothetical protein SORBIDRAFT_05g002040 [Sorghum bicolor]
          Length = 862

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 139/506 (27%), Positives = 248/506 (49%), Gaps = 11/506 (2%)

Query: 77  EWSSESHVLAVNKKLRGLTITKKSHDP-----SLPSSDGPFVENDEKTNNKILQNFCSRG 131
           E+    +V++ N  L+GL   K+  +      ++    G     +  T N I+   C   
Sbjct: 154 EFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQ 213

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
            +  A  ++  M  +    D      +I GL +   +++A  VLQ M+  G  PD +TYN
Sbjct: 214 AVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYN 273

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            ++ GLCK   +  A  +L  M   G +PDV+TYNTI+  +       +A G  +  + K
Sbjct: 274 TIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDK 333

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
              P + TY  LI            +  L++M   G  PD+VTY+ L+++ CK GK  +A
Sbjct: 334 DVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEA 393

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             +   ++ +G++PN   Y  LLH   +RG    +  +LD+M     SP  + +NI++  
Sbjct: 394 RKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCA 453

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
             K  ++D A++ F++M      PD+VTY  ++ ALCK G +++A+   + +     +P 
Sbjct: 454 YAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPN 513

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV---EEAVD 488
            + +N+L+ GL      EKA  L+ +M + G+ P+ +   T++   C   QV   +  +D
Sbjct: 514 SVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLID 573

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
            ++ +G R N +   +Y  +I G C + + D A Q+L++M+S   KPD   + T+++   
Sbjct: 574 SMERVGVRPNVI---SYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYC 630

Query: 549 DDGMTEEAYKLWQKLIEWKVFEKGTT 574
             G  + AY L+++++   V     T
Sbjct: 631 KTGRIDNAYCLFREMLRKGVTPGAVT 656



 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 235/486 (48%), Gaps = 35/486 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N I+   C    +  A  ++  M  +   PD      +I GL +   +++A 
Sbjct: 265 VKPDVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRAD 324

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VLQ M+     PD  TYN ++ G    G+ +  +  L+EM   G +PDV+TY+ +L  +
Sbjct: 325 GVLQHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYL 384

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA------------------ 274
             NGK  +A   +   +RKG  P +  Y IL+     +  IA                  
Sbjct: 385 CKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNN 444

Query: 275 -----------------RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                             A+ +   M+  G SPD+VTY  L++  CK G+ DDAVL  N 
Sbjct: 445 YIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQ 504

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +++ G+ PNS+ +N+L++ L +   W+  +++   M +    P V  +N ++  LC  G 
Sbjct: 505 MINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQ 564

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           V  A    + M     +P++++YNT++G  C  G  +EA QLL ++      P LI+Y+T
Sbjct: 565 VMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDT 624

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           L+ G  K G ++ A  L+ +M+  G++P  +T+ T++ G     +  EA +L   + K G
Sbjct: 625 LLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSG 684

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            +     Y ++++GLCK+  VD A ++ + + S   +P+   F+ ++  +   G  ++A 
Sbjct: 685 QQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAM 744

Query: 558 KLWQKL 563
            L+  +
Sbjct: 745 DLFASI 750



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 103/383 (26%), Positives = 200/383 (52%), Gaps = 4/383 (1%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           PD  TY+++ G  C+ G+I    A    +  +G   + +  N +L  + D  +  +A+  
Sbjct: 88  PDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVINQLLNGLCDAKRVDEAMDI 147

Query: 245 WKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG---CSPDIVTYNSLVN 300
              ++ + GC P +++   L++ +C +  +  A+E+L  MA +G   C+P++VTYN++++
Sbjct: 148 LLRRMPEFGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIID 207

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK    D A  V+ +++ +G++ + +TY+T++  L      D  + +L  M +    P
Sbjct: 208 GLCKAQAVDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKP 267

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN +I+GLCK   VDRA      M+ K  +PD+VTYNT++  LCK   ++ A  +L
Sbjct: 268 DVVTYNTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVL 327

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P + TYN LI G    G  ++ +    +M   G+ PD +T+  L+   C+ 
Sbjct: 328 QHMIDKDVKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKN 387

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +  EA  +   + ++G K   + Y +++HG      +     +L+LM+++   P++ +F
Sbjct: 388 GKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIF 447

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++   A   M +EA  ++ ++
Sbjct: 448 NIVLCAYAKKAMIDEAMHIFSRM 470



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/448 (25%), Positives = 214/448 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D +T N ++  + S G+  +  + ++ M  R   PD      L+  L +  +  +A 
Sbjct: 335 VKPDIQTYNCLIHGYLSTGEWKEVVRRLEEMYARGLDPDVVTYSLLLDYLCKNGKCTEAR 394

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+   M+  G  P+   Y +++ G   RG I     LLD M  +G  P+   +N +L   
Sbjct: 395 KIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLTDLLDLMVANGISPNNYIFNIVLCAY 454

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                  +A+  +    + G  P ++TY ILI+ +CK   +  A+   + M  +G +P+ 
Sbjct: 455 AKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNS 514

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V +NSLV   C   +++ A  +   +  +G+ PN + +NT++ +L + G      +++D 
Sbjct: 515 VVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDS 574

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P V +YN LI G C  G  D A    + MVS   +PD+++Y+T+L   CK G 
Sbjct: 575 MERVGVRPNVISYNTLIGGHCLAGRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGR 634

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ A  L   +     +P  +TY+T++ GL       +A  LY  M+++G   D  T+  
Sbjct: 635 IDNAYCLFREMLRKGVTPGAVTYSTILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNI 694

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++ G C+ + V+EA  + + +  +  +     + ++I  L K  +   A+ +   + S  
Sbjct: 695 ILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHG 754

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLW 560
             P+   +  ++K +  +G+ +E   L+
Sbjct: 755 LVPNVVTYCIMMKNIIQEGLLDEFDNLF 782



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/467 (25%), Positives = 217/467 (46%), Gaps = 5/467 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T + +L   C  GK T+A K+   M R+   P+      L+ G      I   +
Sbjct: 370 LDPDVVTYSLLLDYLCKNGKCTEARKIFYCMIRKGIKPNVTIYGILLHGYAARGAIADLT 429

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L +MV +G  P+   +N+++    K+  I  A+ +   MS  G  PDV+TY  ++  +
Sbjct: 430 DLLDLMVANGISPNNYIFNIVLCAYAKKAMIDEAMHIFSRMSQHGLSPDVVTYGILIDAL 489

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A+  +   +  G  P  + +  L+  +C      +A E+  +M  +G  P++
Sbjct: 490 CKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELFFEMWDQGVRPNV 549

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL--HSLGSRGCWDAVDKIL 350
           V +N+++   C +G+   A  +I+++   G+ PN I+YNTL+  H L  R   D   ++L
Sbjct: 550 VFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLAGR--TDEAAQLL 607

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           D+M      P + +Y+ L+ G CK G +D A   F +M+ K   P  VTY+T+L  L   
Sbjct: 608 DVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTYSTILQGLFHT 667

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
              +EA +L   +  S     + TYN +++GL K  C+++A  ++  +    + P+ IT 
Sbjct: 668 RRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCSKDLRPNIITF 727

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             +I    +  + ++A+DL   I   G       Y +++  + +   +D    +   M  
Sbjct: 728 TIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDEFDNLFLAMEK 787

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV-FEKGTTLL 576
           S   PD  + + I++ +   G    A     K+ E     E  TT L
Sbjct: 788 SGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSL 834



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 101/374 (27%), Positives = 173/374 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G++ DA    + M      P+     +L+ GL  +DR EKA ++ 
Sbjct: 478 DVVTYGILIDALCKLGRVDDAVLKFNQMINDGVTPNSVVFNSLVYGLCTVDRWEKAEELF 537

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ + +N ++  LC  GQ+  A  L+D M   G  P+VI+YNT++      
Sbjct: 538 FEMWDQGVRPNVVFFNTIMCNLCNEGQVMVAQRLIDSMERVGVRPNVISYNTLIGGHCLA 597

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A       +  G  P LI+Y  L+   CK   I  A  +  +M  +G +P  VTY
Sbjct: 598 GRTDEAAQLLDVMVSVGLKPDLISYDTLLRGYCKTGRIDNAYCLFREMLRKGVTPGAVTY 657

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++++       ++ +A  +  N++  G + +  TYN +L+ L    C D   KI   +  
Sbjct: 658 STILQGLFHTRRFSEAKELYLNMIKSGQQWDIYTYNIILNGLCKTNCVDEAFKIFQSLCS 717

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + T+ I+I+ L K G    A++ F  + S    P++VTY  ++  + +EG+L+E
Sbjct: 718 KDLRPNIITFTIMIDVLFKGGRKKDAMDLFASIPSHGLVPNVVTYCIMMKNIIQEGLLDE 777

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
              L   +  S C+P  +  N +I  L  +G + +A     ++ E   S +  T   LI 
Sbjct: 778 FDNLFLAMEKSGCTPDSVMLNAIIRSLLGRGEIMRAGAYLSKIDEMNFSLEASTTSLLIS 837

Query: 476 GFCRADQVEEAVDL 489
            F R +    A  L
Sbjct: 838 LFSREEYKNHAKSL 851



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/301 (29%), Positives = 143/301 (47%), Gaps = 44/301 (14%)

Query: 276 AIEVLDDMAIEGCS----PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
           A+ + + MA   CS    PD+ TY+ L    C+ G+ +        +L  G   N +  N
Sbjct: 71  AVSLFNRMA-RACSNKVRPDLCTYSILTGCFCRLGRIEHGFAAFGLILKTGWRVNEVVIN 129

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF-NQMVS 390
            LL                                   NGLC    VD A++    +M  
Sbjct: 130 QLL-----------------------------------NGLCDAKRVDEAMDILLRRMPE 154

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL---NGSSCSPCLITYNTLIDGLAKKGC 447
             C P++V+ NT+L  LC E  + EAL+LLH +    G +C+P ++TYNT+IDGL K   
Sbjct: 155 FGCMPNVVSCNTLLKGLCNEKRVEEALELLHTMAEDGGGNCTPNVVTYNTIIDGLCKAQA 214

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +++A  +   M++ G+  D +T+ T+I G C+A  V+ A  +L+ +  +G K     Y  
Sbjct: 215 VDRAEGVLQHMIDKGVKLDVVTYSTIIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNT 274

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +I GLCK++ VD A  VL+ MI    KPD   ++TI+  +      + A  + Q +I+  
Sbjct: 275 IIDGLCKAQAVDRAEGVLQHMIDKGVKPDVVTYNTIIDGLCKAQAVDRADGVLQHMIDKD 334

Query: 568 V 568
           V
Sbjct: 335 V 335


>gi|115441099|ref|NP_001044829.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|18461197|dbj|BAB84394.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113534360|dbj|BAF06743.1| Os01g0852900 [Oryza sativa Japonica Group]
 gi|125572662|gb|EAZ14177.1| hypothetical protein OsJ_04103 [Oryza sativa Japonica Group]
          Length = 703

 Score =  224 bits (571), Expect = 9e-56,   Method: Compositional matrix adjust.
 Identities = 140/485 (28%), Positives = 239/485 (49%), Gaps = 37/485 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T N +L++ C+RG L  A  L D + RR   PD      L+ GL + DR++ A  +L  
Sbjct: 159 QTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDE 218

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNG 236
           M  S   PD + YN ++GG  K G+    + + D++    G  P++ TYN +L  +   G
Sbjct: 219 MPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFG 278

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +FK+    W+  +     P +ITY ILI  +C+   +  A  V  ++   G   D   YN
Sbjct: 279 RFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYN 338

Query: 297 SLVNFSCKQGKYDDAV------------------LVINNLLSRGME-------------- 324
           SLV   C+ G+  +A                   ++I  L   GM               
Sbjct: 339 SLVKGFCQAGRVQEAWKFWDSAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELWDLLEKDV 398

Query: 325 ---PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
              P+++T+ TL+H L   G  +    I +    +     VF+Y+ +INGLC  G +  A
Sbjct: 399 ACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDA 458

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +  + +M    C+P+   YN ++   C+    ++A+++   +  + CSP +ITYNTLIDG
Sbjct: 459 VKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVITYNTLIDG 518

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L K    ++A  +  +M+ENG +PD  T+ +LI G     ++++A+ + K+I  +G K+ 
Sbjct: 519 LCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQILYKGLKVD 578

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV-FSTIVKKVADDGMTEEAYKLW 560
              + ++IHGLC + KVD A+ V   M   +  P + V ++T++  + + G  ++A  LW
Sbjct: 579 VMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYETGYIDKAATLW 638

Query: 561 QKLIE 565
             + E
Sbjct: 639 TSITE 643



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 126/425 (29%), Positives = 207/425 (48%), Gaps = 40/425 (9%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           P    +  T N +L   C  G+  +  ++ + M   N  PD      LI GL R   ++ 
Sbjct: 258 PGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDG 317

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A++V   ++ +G V D   YN +V G C+ G+++ A    D    +G   ++ TYN +++
Sbjct: 318 AARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIK 376

Query: 231 TMFDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
            +FD+G   +AI  W D L K   C P  +T+  LI  +C+     +A  + ++  + G 
Sbjct: 377 GLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGK 435

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             D+ +Y+S++N  C  G+  DAV V   +   G +PNS  YN L+             +
Sbjct: 436 QLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVR 495

Query: 349 ILDIMNEASHSPTVFTYNILINGLCK-------------------------YGL------ 377
           I   M +   SPTV TYN LI+GLCK                         YG       
Sbjct: 496 IYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLF 555

Query: 378 ----VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-LLNGSSCSPCL 432
               +D A++ + Q++ K  + D++ +N ++  LC  G ++EAL +   +    +C P L
Sbjct: 556 SDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNL 615

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           +TYNTL+DGL + G ++KA  L+  + E+G+ PD I++ T I G C  D++ E + LL E
Sbjct: 616 VTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDE 675

Query: 493 IGKRG 497
           +  RG
Sbjct: 676 VLSRG 680



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 107/364 (29%), Positives = 186/364 (51%), Gaps = 9/364 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N +++ FC  G++ +A K  D  A    + +      +I+GL     +++A ++ 
Sbjct: 333 DAAMYNSLVKGFCQAGRVQEAWKFWD-SAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW 391

Query: 176 QIMVMS-GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            ++      +PDT+T+  ++ GLC+ G    A  + +E  VSG + DV +Y++++  + +
Sbjct: 392 DLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+   A+  ++   + GC P    Y  LI   C+    + A+ +   MA  GCSP ++T
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L++  CK  KY +A  V   ++  G  P+  TY +L+  L S      +D  L I  
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSD---KKIDDALSIWK 568

Query: 355 EASHSP---TVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKE 410
           +  +      V  +NILI+GLC  G VD A++ F+ M  K NC P++VTYNT++  L + 
Sbjct: 569 QILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEKKNCPPNLVTYNTLMDGLYET 628

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G +++A  L   +      P +I+YNT I GL     + + + L  +++  GI P  IT 
Sbjct: 629 GYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHEGIQLLDEVLSRGIIPTVITW 688

Query: 471 RTLI 474
             L+
Sbjct: 689 NILV 692



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 197/420 (46%), Gaps = 42/420 (10%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT------------------- 224
            P+  TYN+++  LC RG +  A+ L D +      PD IT                   
Sbjct: 155 APNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALD 214

Query: 225 ----------------YNTILRTMFDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQ 266
                           YN +L   F  G+F++ +  W D+L K  G  P L TY ++++ 
Sbjct: 215 LLDEMPRSRVQPDVVCYNALLGGCFKAGEFEKVMRVW-DKLVKDPGARPNLATYNVMLDG 273

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +CK        EV + M      PD++TY  L++  C+ G  D A  V + ++  G+  +
Sbjct: 274 LCKFGRFKEVGEVWERMVANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVID 333

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           +  YN+L+      G      K  D    A     + TYNI+I GL   G+VD AI  ++
Sbjct: 334 AAMYNSLVKGFCQAGRVQEAWKFWDSAGFAGLR-NLRTYNIMIKGLFDSGMVDEAIELWD 392

Query: 387 QMVSKN--CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            ++ K+  C PD VT+ T++  LC+ G  N+A  +      S     + +Y+++I+GL  
Sbjct: 393 -LLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCN 451

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G +  A+ +Y +M ++G  P+   +  LI GFC+  +  +AV +  ++   G       
Sbjct: 452 VGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVYRTSDAVRIYSKMADNGCSPTVIT 511

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I GLCK++K   A  V   M+ + + PD T + ++++ +  D   ++A  +W++++
Sbjct: 512 YNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYGSLIRGLFSDKKIDDALSIWKQIL 571



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 193/388 (49%), Gaps = 9/388 (2%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG----CEPDVITYNTILRTMFDNGKFKQ 240
           P   ++N ++    +  +   A A    +S         P++ TYN +LR++   G   +
Sbjct: 117 PGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCARGDLDR 176

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +    R+   P  ITY+ L+  + KQ  +  A+++LD+M      PD+V YN+L+ 
Sbjct: 177 AVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYNALLG 236

Query: 301 FSCKQGKYDDAVLVINNLLS-RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              K G+++  + V + L+   G  PN  TYN +L  L   G +  V ++ + M   +  
Sbjct: 237 GCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERMVANNLQ 296

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P V TY ILI+GLC+ G VD A   +++++      D   YN+++   C+ G + EA + 
Sbjct: 297 PDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRVQEAWKF 356

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS--PDDITHRTLIWGF 477
                G +    L TYN +I GL   G +++A+ L+  ++E  ++  PD +T  TLI G 
Sbjct: 357 WD-SAGFAGLRNLRTYNIMIKGLFDSGMVDEAIELW-DLLEKDVACIPDTVTFGTLIHGL 414

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+     +A  + +E    G ++   +Y  +I+GLC   ++  A++V E M     KP+ 
Sbjct: 415 CQNGFANKAFTIFEEARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNS 474

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +++ ++        T +A +++ K+ +
Sbjct: 475 HIYNALISGFCQVYRTSDAVRIYSKMAD 502



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 167/334 (50%), Gaps = 2/334 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           +T N +++     G + +A +L D++ +    IPD      LI GL +     KA  + +
Sbjct: 369 RTYNIMIKGLFDSGMVDEAIELWDLLEKDVACIPDTVTFGTLIHGLCQNGFANKAFTIFE 428

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
              +SG   D  +Y+ M+ GLC  G++  A+ + ++M   GC+P+   YN ++       
Sbjct: 429 EARVSGKQLDVFSYSSMINGLCNVGRLVDAVKVYEKMDKDGCKPNSHIYNALISGFCQVY 488

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +   A+  +      GC P +ITY  LI+ +CK      A  V  +M   G +PDI TY 
Sbjct: 489 RTSDAVRIYSKMADNGCSPTVITYNTLIDGLCKAEKYQEASSVAREMVENGFTPDITTYG 548

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL+       K DDA+ +   +L +G++ + + +N L+H L S G  D    +   M E 
Sbjct: 549 SLIRGLFSDKKIDDALSIWKQILYKGLKVDVMMHNILIHGLCSAGKVDEALHVFSDMKEK 608

Query: 357 SH-SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P + TYN L++GL + G +D+A   +  +     +PDI++YNT +  LC    ++E
Sbjct: 609 KNCPPNLVTYNTLMDGLYETGYIDKAATLWTSITEDGLEPDIISYNTRIKGLCSCDRIHE 668

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +QLL  +      P +IT+N L+  + K G ++
Sbjct: 669 GIQLLDEVLSRGIIPTVITWNILVRAVIKYGPIQ 702



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 86/285 (30%), Positives = 148/285 (51%), Gaps = 6/285 (2%)

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL----LSRGMEPNSITYNTLLHSLGS 339
           +I GC+P I ++N+L++   +  ++ DA     +L      R + PN  TYN +L SL +
Sbjct: 111 SILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIVLRSLCA 170

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
           RG  D    + D +     +P   TY+ L+ GL K   +D A++  ++M     QPD+V 
Sbjct: 171 RGDLDRAVTLFDSLRRRQVAPDRITYSTLMCGLAKQDRLDHALDLLDEMPRSRVQPDVVC 230

Query: 400 YNTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           YN +LG   K G   + +++   L+      P L TYN ++DGL K G  ++   ++ +M
Sbjct: 231 YNALLGGCFKAGEFEKVMRVWDKLVKDPGARPNLATYNVMLDGLCKFGRFKEVGEVWERM 290

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           + N + PD IT+  LI G CR+  V+ A  +  EI K G  +  + Y  ++ G C++ +V
Sbjct: 291 VANNLQPDVITYGILIHGLCRSGDVDGAARVYSEIIKTGLVIDAAMYNSLVKGFCQAGRV 350

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             A +  +    +  +   T ++ ++K + D GM +EA +LW  L
Sbjct: 351 QEAWKFWDSAGFAGLRNLRT-YNIMIKGLFDSGMVDEAIELWDLL 394



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 44/204 (21%), Positives = 90/204 (44%), Gaps = 40/204 (19%)

Query: 367 ILINGLCKYGLVDRAINSFNQMVS-KNCQPDIVTYNTVLGALCKEGMLNEA----LQLLH 421
           ++++   +  + D A+++F  + S   C P I ++N +L A  +    ++A      L H
Sbjct: 88  VVLSAFSRAIMPDAALDAFRALPSILGCNPGIRSHNALLDAFVRARRFSDADAFFASLSH 147

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
              G   +P L TYN ++  L  +G +++A+ L+  +    ++PD IT+ T         
Sbjct: 148 GAFGRRIAPNLQTYNIVLRSLCARGDLDRAVTLFDSLRRRQVAPDRITYST--------- 198

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
                                     ++ GL K  ++D A+ +L+ M  SR +PD   ++
Sbjct: 199 --------------------------LMCGLAKQDRLDHALDLLDEMPRSRVQPDVVCYN 232

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++      G  E+  ++W KL++
Sbjct: 233 ALLGGCFKAGEFEKVMRVWDKLVK 256


>gi|357494043|ref|XP_003617310.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355518645|gb|AET00269.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 716

 Score =  224 bits (571), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/453 (27%), Positives = 230/453 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N ++  +C RG +++A  L+D MA +   P       LI GL +    E+A 
Sbjct: 255 VYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAK 314

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +VL  M+  G  P+  T+N M+   C++  +  A  + +EM   G  PD+I++++I+   
Sbjct: 315 RVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVF 374

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG+  +A+ +++     G  P  + YTILI   C+   ++ A+++ ++M   GC  D+
Sbjct: 375 SRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDV 434

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L+N  C+    DDA  +   ++ RG+ P+  T  TL+H     G       + + 
Sbjct: 435 VTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFET 494

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M   S  P V TYN L++G CK G +++A   +  M+S+   P  ++++ ++   C  G+
Sbjct: 495 MTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGL 554

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA +L   +      P L+T NT+I G  + G + KA      M+  G+ PD IT+ T
Sbjct: 555 VSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNT 614

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI  F + +  + A  L+  + +RG       Y  ++ G  +  ++  A  VL  MI   
Sbjct: 615 LINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKG 674

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             PD + +++++         +EA+++  ++++
Sbjct: 675 INPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQ 707



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 130/442 (29%), Positives = 215/442 (48%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +    KL + S+   ++ +R      + C  L+  ++++  ++ A KV +  V SG
Sbjct: 160 LIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYEDFVKSG 219

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            + +  T N+MV  LCK G++ +    L EM   G   D++TYNT++      G   +A 
Sbjct: 220 NIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRGLVSEAF 279

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G       KG  P L TY  LI  +CK+    RA  VLD+M   G  P+  T+N ++  S
Sbjct: 280 GLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFNPMLVES 339

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C++    +A  V N +L RG+ P+ I++++++      G         + M      P  
Sbjct: 340 CRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGVGLVPDT 399

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y ILING C+   V  A+   N+MV + C  D+VTYNT+L  LC+  ML++A +L   
Sbjct: 400 VIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDADELFKE 459

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   T  TLI G  K G M KA+ L+  M    + PD +T+ TL+ GFC+  +
Sbjct: 460 MVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTYNTLMDGFCKVGE 519

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E+A +L  ++  R       ++ ++I+G C    V  A ++ + M     KP     +T
Sbjct: 520 MEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKEKGIKPTLVTCNT 579

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           I+K     G   +A      +I
Sbjct: 580 IIKGYLRAGNLSKANDFLNTMI 601



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 204/382 (53%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +  T N +L   C +  + +A ++ + M +R  +PD     +++    R   + +A    
Sbjct: 328 NAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYF 387

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G VPDT+ Y +++ G C+   +  A+ + +EM   GC  DV+TYNT+L  +   
Sbjct: 388 EKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRG 447

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A   +K+ + +G  P   T T LI   CK   + +A+ + + M +    PD+VTY
Sbjct: 448 KMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETMTLRSLKPDVVTY 507

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK G+ + A  +  +++SR + P+ I+++ L++   S G      ++ D M E
Sbjct: 508 NTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSLGLVSEAFRLWDEMKE 567

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               PT+ T N +I G  + G + +A +  N M+S+   PD +TYNT++ +  KE   + 
Sbjct: 568 KGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITYNTLINSFVKEENFDR 627

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L++ +      P L+TYN ++ G ++ G M++A ++  +M++ GI+PD  T+ +LI 
Sbjct: 628 AFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMIDKGINPDKSTYTSLIN 687

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G+   D ++EA  +  E+ +RG
Sbjct: 688 GYVSKDNMKEAFRVHDEMLQRG 709



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 120/445 (26%), Positives = 208/445 (46%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L      G +  A K+ +   +   I + +    ++  L +  +++     L  M  
Sbjct: 193 NALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEE 252

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D +TYN +V   C+RG +  A  L+D M+  G +P + TYN ++  +   G +++
Sbjct: 253 KGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYER 312

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     + L  G  P   T+  ++ + C++  +  A  V ++M   G  PD+++++S+V 
Sbjct: 313 AKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVG 372

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              + G+   A+     +   G+ P+++ Y  L++            K+ + M E     
Sbjct: 373 VFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM 432

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN L+NGLC+  ++D A   F +MV +   PD  T  T++   CK+G + +AL L 
Sbjct: 433 DVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLF 492

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +   S  P ++TYNTL+DG  K G MEKA  L+  M+   I P  I+   LI GFC  
Sbjct: 493 ETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSL 552

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             V EA  L  E+ ++G K        +I G  ++  +  A   L  MIS    PD   +
Sbjct: 553 GLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITY 612

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           +T++     +   + A+ L   + E
Sbjct: 613 NTLINSFVKEENFDRAFFLINNMEE 637



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 93/344 (27%), Positives = 171/344 (49%)

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N +L  +   G    A   ++D ++ G    + T  I++  +CK   +      L +M  
Sbjct: 193 NALLGAIVKVGWVDLAWKVYEDFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEE 252

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +G   D+VTYN+LVN  C++G   +A  +++ +  +G++P   TYN L++ L   G ++ 
Sbjct: 253 KGVYADLVTYNTLVNAYCRRGLVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYER 312

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             ++LD M      P   T+N ++   C+   V  A   FN+M+ +   PD++++++++G
Sbjct: 313 AKRVLDEMLGVGLCPNAATFNPMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVG 372

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
              + G L  AL     + G    P  + Y  LI+G  +   +  A+ +  +M+E G   
Sbjct: 373 VFSRNGELGRALAYFEKMKGVGLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVM 432

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +T+ TL+ G CR   +++A +L KE+ +RG          +IHG CK   +  A+ + 
Sbjct: 433 DVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLF 492

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           E M     KPD   ++T++      G  E+A +LW  +I  ++F
Sbjct: 493 ETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIF 536



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 132/281 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C    L DA +L   M  R   PDF+    LI G  +   + KA  + 
Sbjct: 433 DVVTYNTLLNGLCRGKMLDDADELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLF 492

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M +    PD +TYN ++ G CK G++  A  L  +M      P  I+++ ++      
Sbjct: 493 ETMTLRSLKPDVVTYNTLMDGFCKVGEMEKAKELWYDMISREIFPSYISFSILINGFCSL 552

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   W +   KG  P L+T   +I+   +   +++A + L+ M  EG  PD +TY
Sbjct: 553 GLVSEAFRLWDEMKEKGIKPTLVTCNTIIKGYLRAGNLSKANDFLNTMISEGVPPDCITY 612

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N   K+  +D A  +INN+  RG+ PN +TYN +L      G     + +L  M +
Sbjct: 613 NTLINSFVKEENFDRAFFLINNMEERGLLPNLVTYNAILGGFSRHGRMQEAEMVLHKMID 672

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +P   TY  LING      +  A    ++M+ +   PD
Sbjct: 673 KGINPDKSTYTSLINGYVSKDNMKEAFRVHDEMLQRGFVPD 713



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 85/342 (24%), Positives = 148/342 (43%), Gaps = 35/342 (10%)

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           ++ + +LI    +   +    E    +   G    I   N+L+    K G  D A  V  
Sbjct: 154 VVVFDLLIRTYVQARKLREGSEAFQLLRKRGFCVSINACNALLGAIVKVGWVDLAWKVYE 213

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
           + +  G   N  T N ++++L   G  D V   L  M E      + TYN L+N  C+ G
Sbjct: 214 DFVKSGNIVNVYTLNIMVNALCKDGKLDNVGVYLSEMEEKGVYADLVTYNTLVNAYCRRG 273

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG----------- 425
           LV  A    + M  K  +P + TYN ++  LCKEG    A ++L  + G           
Sbjct: 274 LVSEAFGLVDCMAGKGLKPGLFTYNALINGLCKEGSYERAKRVLDEMLGVGLCPNAATFN 333

Query: 426 ----SSCS--------------------PCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
                SC                     P LI++++++   ++ G + +A+  + +M   
Sbjct: 334 PMLVESCRKEDVWEAERVFNEMLQRGVVPDLISFSSIVGVFSRNGELGRALAYFEKMKGV 393

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G+ PD + +  LI G+CR D V  A+ +  E+ +RG  M    Y  +++GLC+ K +D A
Sbjct: 394 GLVPDTVIYTILINGYCRNDDVSGALKMRNEMVERGCVMDVVTYNTLLNGLCRGKMLDDA 453

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            ++ + M+     PD    +T++     DG   +A  L++ +
Sbjct: 454 DELFKEMVERGVFPDFYTLTTLIHGYCKDGNMTKALSLFETM 495


>gi|449532420|ref|XP_004173179.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g05670, mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 225/443 (50%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ + C  GK+ +A +L+  M  R+  PD      +I G   +  ++KA K++  M +
Sbjct: 262 NIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQI 321

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+  TYN ++  LCK G+   A  +L EM      PD + Y T++   F  G  + 
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRT 381

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A  ++ + L K   P  ITYT LI+   +   +     +  +M   G  PD VTY +L++
Sbjct: 382 ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLID 441

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+  +A  + N ++  GM PN +TY  L+  L   G  D  +++LD M +     
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V  YN ++NG+CK G +++AI    +M      PD +TY TV+ A C+ G +++A +LL
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++T+N L++G    G +E    L G M+E GI PD IT+ TL+   C  
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           + +     + K +  +G    ++ Y ++I G CK++ +  A  + + MI   Y P  T +
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSY 681

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++K+        EA +L++++
Sbjct: 682 NALIKRFYKKRKFXEARELFEEM 704



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 225/450 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + + ++  +C  G+L  A KL+D M  +   P+ +   ++I  L +I +  +A KVL
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+    +PD + Y  ++ G  K G +R+A    DEM      PD ITY T+++     
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +    + + + +G  P  +TYT LI+  CK   +  A  + ++M   G +P+IVTY
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++  CK G+ D A  +++ +  +G++ N   YN++++ +   G  +   K++  M  
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A   P   TY  +I+  C+ G +D+A     +M+ +  QP +VT+N ++   C  GML +
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
             +LL  +      P  ITYNTL+     +  M     +Y +M   G++PD  T+  LI 
Sbjct: 592 GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIK 651

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+A  ++EA  L KE+ ++G     ++Y  +I    K +K   A ++ E M       
Sbjct: 652 GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVA 711

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D  +++  V    ++G  E    L  + IE
Sbjct: 712 DGEIYNFFVDMCYEEGDVEITLNLCDEAIE 741



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 206/412 (50%), Gaps = 9/412 (2%)

Query: 162 LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ-IRSAIALLDEMSVSGCEP 220
           L+ I  + +A K+L  ++  G V    + N  +  +    + I  AI +  E  +S    
Sbjct: 200 LVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISW--- 256

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           +  +YN I+ ++   GK K+A         +   P +++Y+ +I+  C    + +A++++
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           DDM I+G  P+  TYNS++   CK GK  +A  V+  ++S+ + P+++ Y TL+H     
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G     +K  D M     SP   TY  LI G  + G V    N F++M+S+  +PD VTY
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
            T++   CK G +  A  L + +     +P ++TY  LIDGL K G ++ A  L  +M +
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G+  +   + +++ G C+A  +E+A+ L+KE+   G       Y  VI   C+   +D 
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
           A ++L+ M+    +P    F+ ++      GM E+      +L+ W + EKG
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDG----DRLLGW-MLEKG 603



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 171/371 (46%), Gaps = 4/371 (1%)

Query: 90  KLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI 149
           KL  +    K  D  L     P    D  T   ++Q F   GK+ +   L   M  R   
Sbjct: 375 KLGHVRTANKWFDEMLSKKISP----DYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD      LI    +   +  A  +   MV  G  P+ +TY  ++ GLCK G++ +A  L
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           LDEM   G + +V  YN+++  +   G  +QAI   K+    G  P  ITYT +I+  C+
Sbjct: 491 LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              I +A ++L +M   G  P +VT+N L+N  C  G  +D   ++  +L +G+ P++IT
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT 610

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YNTL+     R   +   KI   M     +P   TYNILI G CK   +  A   + +M+
Sbjct: 611 YNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMI 670

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            K   P + +YN ++    K+    EA +L   + G         YN  +D   ++G +E
Sbjct: 671 EKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730

Query: 450 KAMVLYGQMME 460
             + L  + +E
Sbjct: 731 ITLNLCDEAIE 741



 Score = 47.4 bits (111), Expect = 0.021,   Method: Compositional matrix adjust.
 Identities = 30/136 (22%), Positives = 59/136 (43%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +++  C R  +   +K+   M  +   PD +    LI+G  +   +++A  + 
Sbjct: 607 DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G VP   +YN ++    K+ +   A  L +EM   G   D   YN  +   ++ 
Sbjct: 667 KEMIEKGYVPTVTSYNALIKRFYKKRKFXEARELFEEMRGHGLVADGEIYNFFVDMCYEE 726

Query: 236 GKFKQAIGFWKDQLRK 251
           G  +  +    + + K
Sbjct: 727 GDVEITLNLCDEAIEK 742


>gi|449449677|ref|XP_004142591.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Cucumis sativus]
          Length = 748

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 132/443 (29%), Positives = 225/443 (50%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ + C  GK+ +A +L+  M  R+  PD      +I G   +  ++KA K++  M +
Sbjct: 262 NIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLMDDMQI 321

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+  TYN ++  LCK G+   A  +L EM      PD + Y T++   F  G  + 
Sbjct: 322 KGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKLGHVRT 381

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A  ++ + L K   P  ITYT LI+   +   +     +  +M   G  PD VTY +L++
Sbjct: 382 ANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTYTTLID 441

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+  +A  + N ++  GM PN +TY  L+  L   G  D  +++LD M +     
Sbjct: 442 VYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRKKGLQL 501

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V  YN ++NG+CK G +++AI    +M      PD +TY TV+ A C+ G +++A +LL
Sbjct: 502 NVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDKAHKLL 561

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++T+N L++G    G +E    L G M+E GI PD IT+ TL+   C  
Sbjct: 562 QEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAITYNTLMKQHCIR 621

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           + +     + K +  +G    ++ Y ++I G CK++ +  A  + + MI   Y P  T +
Sbjct: 622 NSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMIEKGYVPTVTSY 681

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++K+        EA +L++++
Sbjct: 682 NALIKRFYKKKKILEARELFEEM 704



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 128/450 (28%), Positives = 226/450 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + + ++  +C  G+L  A KL+D M  +   P+ +   ++I  L +I +  +A KVL
Sbjct: 292 DVVSYSTVIDGYCHLGELKKALKLMDDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVL 351

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+    +PD + Y  ++ G  K G +R+A    DEM      PD ITY T+++     
Sbjct: 352 REMMSQKIIPDNVVYTTLIHGFFKLGHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQG 411

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +    + + + +G  P  +TYT LI+  CK   +  A  + ++M   G +P+IVTY
Sbjct: 412 GKVIEPQNLFHEMISRGLKPDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTY 471

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++  CK G+ D A  +++ +  +G++ N   YN++++ +   G  +   K++  M  
Sbjct: 472 GALIDGLCKHGELDTANELLDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEV 531

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A   P   TY  +I+  C+ G +D+A     +M+ +  QP +VT+N ++   C  GML +
Sbjct: 532 AGIDPDAITYTTVIDAYCRLGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLED 591

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
             +LL  +      P  ITYNTL+     +  M     +Y +M   G++PD  T+  LI 
Sbjct: 592 GDRLLGWMLEKGIVPDAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIK 651

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+A  ++EA  L KE+ ++G     ++Y  +I    K KK+  A ++ E M       
Sbjct: 652 GHCKARNLKEAWFLYKEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVA 711

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D  +++  V    ++G  E    L  + IE
Sbjct: 712 DGEIYNFFVDMCYEEGDVEITLNLCDEAIE 741



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 116/412 (28%), Positives = 206/412 (50%), Gaps = 9/412 (2%)

Query: 162 LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ-IRSAIALLDEMSVSGCEP 220
           L+ I  + +A K+L  ++  G V    + N  +  +    + I  AI +  E  +S    
Sbjct: 200 LVEIGHLSEARKLLDKLLSYGLVVTVDSCNAFLSRIANNSEGIEMAIKVFCEYGISW--- 256

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           +  +YN I+ ++   GK K+A         +   P +++Y+ +I+  C    + +A++++
Sbjct: 257 NTTSYNIIIYSLCRLGKVKEAHRLLMQMDFRSSTPDVVSYSTVIDGYCHLGELKKALKLM 316

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           DDM I+G  P+  TYNS++   CK GK  +A  V+  ++S+ + P+++ Y TL+H     
Sbjct: 317 DDMQIKGLKPNRYTYNSIILLLCKIGKSFEAEKVLREMMSQKIIPDNVVYTTLIHGFFKL 376

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G     +K  D M     SP   TY  LI G  + G V    N F++M+S+  +PD VTY
Sbjct: 377 GHVRTANKWFDEMLSKKISPDYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLKPDEVTY 436

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
            T++   CK G +  A  L + +     +P ++TY  LIDGL K G ++ A  L  +M +
Sbjct: 437 TTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANELLDEMRK 496

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G+  +   + +++ G C+A  +E+A+ L+KE+   G       Y  VI   C+   +D 
Sbjct: 497 KGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCRLGDIDK 556

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
           A ++L+ M+    +P    F+ ++      GM E+      +L+ W + EKG
Sbjct: 557 AHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDG----DRLLGW-MLEKG 603



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 109/371 (29%), Positives = 172/371 (46%), Gaps = 4/371 (1%)

Query: 90  KLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI 149
           KL  +    K  D  L     P    D  T   ++Q F   GK+ +   L   M  R   
Sbjct: 375 KLGHVRTANKWFDEMLSKKISP----DYITYTTLIQGFGQGGKVIEPQNLFHEMISRGLK 430

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD      LI    +   +  A  +   MV  G  P+ +TY  ++ GLCK G++ +A  L
Sbjct: 431 PDEVTYTTLIDVYCKAGEMVNAFSLHNEMVQMGMTPNIVTYGALIDGLCKHGELDTANEL 490

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           LDEM   G + +V  YN+++  +   G  +QAI   K+    G  P  ITYT +I+  C+
Sbjct: 491 LDEMRKKGLQLNVCIYNSMVNGICKAGNIEQAIKLMKEMEVAGIDPDAITYTTVIDAYCR 550

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              I +A ++L +M   G  P +VT+N L+N  C  G  +D   ++  +L +G+ P++IT
Sbjct: 551 LGDIDKAHKLLQEMLDRGLQPTVVTFNVLMNGFCMLGMLEDGDRLLGWMLEKGIVPDAIT 610

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YNTL+     R   +   KI   M     +P   TYNILI G CK   +  A   + +M+
Sbjct: 611 YNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLYKEMI 670

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            K   P + +YN ++    K+  + EA +L   + G         YN  +D   ++G +E
Sbjct: 671 EKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEEGDVE 730

Query: 450 KAMVLYGQMME 460
             + L  + +E
Sbjct: 731 ITLNLCDEAIE 741



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 31/136 (22%), Positives = 60/136 (44%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +++  C R  +   +K+   M  +   PD +    LI+G  +   +++A  + 
Sbjct: 607 DAITYNTLMKQHCIRNSMNTTTKIYKRMRNQGVAPDSNTYNILIKGHCKARNLKEAWFLY 666

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G VP   +YN ++    K+ +I  A  L +EM   G   D   YN  +   ++ 
Sbjct: 667 KEMIEKGYVPTVTSYNALIKRFYKKKKILEARELFEEMRGHGLVADGEIYNFFVDMCYEE 726

Query: 236 GKFKQAIGFWKDQLRK 251
           G  +  +    + + K
Sbjct: 727 GDVEITLNLCDEAIEK 742


>gi|296087921|emb|CBI35204.3| unnamed protein product [Vitis vinifera]
          Length = 543

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 219/423 (51%), Gaps = 8/423 (1%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           I   H  IN    L R  +I +A  +   M+  G  PD +TY  ++ GLCK G   +AI 
Sbjct: 96  IYTLHILINSFCHLNR-GKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIR 154

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           LL  M    C+P+V  YNTI+ ++  + +  +A   + + + KG  P + TY  LI  +C
Sbjct: 155 LLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALC 214

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG-MEPNS 327
             C       +L++M      PD+V++N++V+  CK+GK  +A  V++ ++ RG   PN 
Sbjct: 215 NLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNV 274

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINS 384
           I+YNTL++          +DK + +  E       P   TY+ LI+GLC    +  AI  
Sbjct: 275 ISYNTLINGYCK---IQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIAL 331

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F++MV+ +  P++VTY  +L  LCK   L EA+ LL  + GS+  P +   N  IDG+ +
Sbjct: 332 FHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCR 391

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G +E A  L+  +   G+ PD  T+  +I G CR   ++EA  L +E+ + G  +    
Sbjct: 392 AGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKLFREMDENGCTLNGCI 451

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +  G  ++ +   AIQ+L+ M++  +  D +  +  VK ++DDG+ +   ++ +   
Sbjct: 452 YNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSDDGLDQSLKQILRDFC 511

Query: 565 EWK 567
           + K
Sbjct: 512 KQK 514



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 195/395 (49%), Gaps = 5/395 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G  + A +L+  M ++N  P+      +I  L +  ++ +A  + 
Sbjct: 132 DVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLF 191

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  PD  TYN ++  LC   + +    LL+EM  S   PDV+++NT++  +   
Sbjct: 192 SEMVTKGISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKE 251

Query: 236 GKFKQAIGFWKDQL-RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           GK  +A       + R GC P +I+Y  LI   CK   I +A+ +  +M  +   PD VT
Sbjct: 252 GKVTEAHDVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVT 311

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y++L++  C   +  DA+ + + +++    PN +TY  LL  L           +L  + 
Sbjct: 312 YSTLIHGLCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLKAIE 371

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            ++  P +   NI I+G+C+ G ++ A + F+ + SK  QPD+ TY+ ++  LC+ G+L+
Sbjct: 372 GSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLD 431

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +L   ++ + C+     YNT+  G  +     +A+ L  +M+  G S D  T  TL 
Sbjct: 432 EASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST-MTLF 490

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
                 D ++++   LK+I +   K ++  Y  V+
Sbjct: 491 VKMLSDDGLDQS---LKQILRDFCKQKSWIYENVM 522



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 173/361 (47%), Gaps = 38/361 (10%)

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI  +   LR   PP  + +  L+  + K    +  + +   M   G  P+I T + L+N
Sbjct: 45  AISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYTLHILIN 104

Query: 301 FSCK--QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
             C   +GK  +A+ + + ++  G  P+ +TY TL++ L   G   A  ++L  M + + 
Sbjct: 105 SFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGSMVQKNC 164

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY------------------ 400
            P VF YN +I+ LCK   V  A N F++MV+K   PDI TY                  
Sbjct: 165 QPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCEWKHVAT 224

Query: 401 -----------------NTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGL 442
                            NTV+ ALCKEG + EA  ++  ++    C P +I+YNTLI+G 
Sbjct: 225 LLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQRGGCMPNVISYNTLINGY 284

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K   ++KAM L+G+M    + PD +T+ TLI G C  +++++A+ L  E+         
Sbjct: 285 CKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQDAIALFHEMVACSQIPNL 344

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             YR+++  LCK++ +  A+ +L+ +  S   PD  V +  +  +   G  E A  L+  
Sbjct: 345 VTYRILLDYLCKNRYLAEAMALLKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSN 404

Query: 563 L 563
           L
Sbjct: 405 L 405



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 83/311 (26%), Positives = 152/311 (48%), Gaps = 5/311 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N ++   C+  +    + L++ M     +PD      ++  L +  ++ +A 
Sbjct: 199 ISPDIFTYNSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAH 258

Query: 173 KVLQIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            V+  M+  GG +P+ I+YN ++ G CK  +I  A+ L  EM      PD +TY+T++  
Sbjct: 259 DVVDKMIQRGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHG 318

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS-- 289
           +    + + AI  + + +     P L+TY IL++ +CK   +A A+ +L   AIEG +  
Sbjct: 319 LCHVERLQDAIALFHEMVACSQIPNLVTYRILLDYLCKNRYLAEAMALLK--AIEGSNLD 376

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PDI   N  ++  C+ G+ + A  + +NL S+G++P+  TY+ +++ L  RG  D   K+
Sbjct: 377 PDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCRRGLLDEASKL 436

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M+E   +     YN +  G  +     RAI    +MV++    D  T    +  L  
Sbjct: 437 FREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADASTMTLFVKMLSD 496

Query: 410 EGMLNEALQLL 420
           +G+     Q+L
Sbjct: 497 DGLDQSLKQIL 507



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 80/310 (25%), Positives = 147/310 (47%), Gaps = 38/310 (12%)

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +++N   + S      D A+   N +L     P+++ +N LL S+        +  +   
Sbjct: 27  LSHNRFHSKSLHFNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQ 86

Query: 353 MNEASHSPTVFTYNILINGLCKY--GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           M+     P ++T +ILIN  C    G +  A++ F++M+ +  +PD+VTY T++  LCK 
Sbjct: 87  MDSFGIPPNIYTLHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKV 146

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G  + A++LL  +   +C P +  YNT+ID L K   + +A  L+ +M+  GISPD  T+
Sbjct: 147 GNTSAAIRLLGSMVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTY 206

Query: 471 RTLI--------W---------------------------GFCRADQVEEAVDLLKEIGK 495
            +LI        W                             C+  +V EA D++ ++ +
Sbjct: 207 NSLIHALCNLCEWKHVATLLNEMVDSKIMPDVVSFNTVVDALCKEGKVTEAHDVVDKMIQ 266

Query: 496 RGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           RG  M N  +Y  +I+G CK +++D A+ +   M      PD   +ST++  +      +
Sbjct: 267 RGGCMPNVISYNTLINGYCKIQRIDKAMYLFGEMCRQELIPDTVTYSTLIHGLCHVERLQ 326

Query: 555 EAYKLWQKLI 564
           +A  L+ +++
Sbjct: 327 DAIALFHEMV 336



 Score = 83.6 bits (205), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 97/196 (49%), Gaps = 2/196 (1%)

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
           +  +D AI+SFN+M+     P  V +N +L ++ K    +  L L H ++     P + T
Sbjct: 39  FNTIDGAISSFNRMLRMQPPPSTVDFNKLLTSIAKMKHHSTLLSLSHQMDSFGIPPNIYT 98

Query: 435 YNTLIDGLAK--KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
            + LI+      +G + +A+ L+ +M+  G  PD +T+ TLI G C+      A+ LL  
Sbjct: 99  LHILINSFCHLNRGKIGEALHLFDKMIGEGFRPDVVTYGTLINGLCKVGNTSAAIRLLGS 158

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + ++  +    AY  +I  LCK ++V  A  +   M++    PD   +++++  + +   
Sbjct: 159 MVQKNCQPNVFAYNTIIDSLCKDRQVTEAFNLFSEMVTKGISPDIFTYNSLIHALCNLCE 218

Query: 553 TEEAYKLWQKLIEWKV 568
            +    L  ++++ K+
Sbjct: 219 WKHVATLLNEMVDSKI 234



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 60/132 (45%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L + +G  ++ D + NN  +   C  G+L  A  L   ++ +   PD      +I GL R
Sbjct: 367 LKAIEGSNLDPDIQVNNIAIDGMCRAGELEAARDLFSNLSSKGLQPDVWTYSIMINGLCR 426

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
              +++ASK+ + M  +G   +   YN +  G  +  +   AI LL EM   G   D  T
Sbjct: 427 RGLLDEASKLFREMDENGCTLNGCIYNTITRGFLRNNETSRAIQLLQEMVARGFSADAST 486

Query: 225 YNTILRTMFDNG 236
               ++ + D+G
Sbjct: 487 MTLFVKMLSDDG 498


>gi|218195055|gb|EEC77482.1| hypothetical protein OsI_16315 [Oryza sativa Indica Group]
          Length = 455

 Score =  224 bits (570), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 128/408 (31%), Positives = 217/408 (53%), Gaps = 16/408 (3%)

Query: 83  HVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDI 142
           H+ +  K  R L + ++   P            +  T N ++  FCSRG++  A  ++  
Sbjct: 50  HLCSAGKPARALELLRQMPRP------------NAVTYNTVIAGFCSRGRVQAALDIMRE 97

Query: 143 MARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKR 200
           M  R  I P+ +    +I G  ++ R+++A KV   M+  G V P+ + YN ++GG C +
Sbjct: 98  MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 157

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G++ +A+   D M   G    V TYN ++  +F +G+  +A    ++   KG  P + TY
Sbjct: 158 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 217

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            ILI   CK+  + +A+E+ ++M+  G    +VTY SL+    K+G+  +   + +  + 
Sbjct: 218 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 277

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           RG+ P+ + YN L++S  + G  D   +I+  M +   +P   TYN L+ GLC  G VD 
Sbjct: 278 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 337

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A    ++M  +  QPD+VTYNT++     +G + +AL++ + +     +P L+TYN LI 
Sbjct: 338 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 397

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           GL K G  + A  +  +M+ENGI+PDD T+ +LI G    D  E A+D
Sbjct: 398 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED--ERAID 443



 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 207/396 (52%), Gaps = 6/396 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L++ CS GK   A +L+  M R N +        +I G     R++ A  +++ M
Sbjct: 43  TFNIMLRHLCSAGKPARALELLRQMPRPNAVT----YNTVIAGFCSRGRVQAALDIMREM 98

Query: 179 VMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNG 236
              GG+ P+  TY  ++ G CK G++  A+ + DEM   G  +P+ + YN ++    D G
Sbjct: 99  RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 158

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K   A+ +    + +G    + TY +L+  +        A E++++M  +G +PD+ TYN
Sbjct: 159 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 218

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L+N  CK+G    A+ +  N+  RG+    +TY +L+++L  +G     DK+ D     
Sbjct: 219 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 278

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P +  YN LIN     G +DRA     +M  K   PD VTYNT++  LC  G ++EA
Sbjct: 279 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 338

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +L+  +      P L+TYNTLI G + KG ++ A+ +  +MM  G +P  +T+  LI G
Sbjct: 339 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 398

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            C+  Q ++A +++KE+ + G    +S Y  +I GL
Sbjct: 399 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 434



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 118/393 (30%), Positives = 209/393 (53%), Gaps = 6/393 (1%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T+N+M+  LC  G+   A+ LL +M      P+ +TYNT++      G+ + A+   +
Sbjct: 41  TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 96

Query: 247 D-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCK 304
           + + R G  P   TY  +I   CK   +  A++V D+M  +G   P+ V YN+L+   C 
Sbjct: 97  EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 156

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           QGK D A+L  + ++ RG+     TYN L+H+L   G      ++++ M     +P VFT
Sbjct: 157 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 216

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YNILING CK G V +A+  F  M  +  +  +VTY +++ AL K+G + E  +L     
Sbjct: 217 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 276

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P L+ YN LI+  +  G +++A  + G+M +  I+PDD+T+ TL+ G C   +V+
Sbjct: 277 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 336

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  L+ E+ KRG +     Y  +I G      V  A+++   M++  + P    ++ ++
Sbjct: 337 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 396

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           + +  +G  ++A  + ++++E  +    +T ++
Sbjct: 397 QGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 429


>gi|147780655|emb|CAN66818.1| hypothetical protein VITISV_004776 [Vitis vinifera]
          Length = 1037

 Score =  223 bits (569), Expect = 1e-55,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 218/423 (51%), Gaps = 1/423 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           IL+ +  +G   +A  + D M +  +IP    C +L+  L++      A  V Q M+  G
Sbjct: 162 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVG 221

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD    ++MV   CK G++  A   + +M   G EP+++TY++++      G  + A 
Sbjct: 222 IVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK 281

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC-SPDIVTYNSLVNF 301
           G  K    KG    ++TYT+LI+  CKQC +  A +VL  M  E    PD   Y  L++ 
Sbjct: 282 GVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDG 341

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+ GK DDAV +++ +L  G++ N    N+L++    RG     + ++  M + +  P 
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++YN L++G C+ G    A N  ++M+ +  +P ++TYNT+L  LC+ G  ++ALQ+ H
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 461

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           L+     +P  + Y+TL+DGL K    E A  L+  ++  G +   IT  T+I G C+  
Sbjct: 462 LMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMG 521

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ EA ++  ++   G       YR +I G CK+  V  A +V   M      P   +++
Sbjct: 522 KMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYN 581

Query: 542 TIV 544
           +++
Sbjct: 582 SLI 584



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 223/491 (45%), Gaps = 32/491 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE+    ++  +C  GK+ DA +L+D M R     +   C +LI G  +   I +A  V+
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV     PD+ +YN ++ G C+ G    A  L D+M   G EP V+TYNT+L+ +   
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G F  A+  W   ++ G  P  + Y+ L++ + K      A  +  D+   G +   +T+
Sbjct: 451 GAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++  CK GK  +A  + + +   G  P+ ITY TL+             K+   M  
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SP++  YN LI+GL K   +    +   +M  +   P+IVTY  ++   CKEGML++
Sbjct: 571 EXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD--------- 466
           A      +  +  S  +I  +T++ GL + G +++A +L  +M+++G  PD         
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690

Query: 467 -----------------------DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
                                  +I +   I G C+  +V++A      +  +G    N 
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +IHG   +  VD A ++ + M+     P+   ++ ++  +      + A +L+ KL
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810

Query: 564 IEWKVFEKGTT 574
            +  +F    T
Sbjct: 811 HQKGLFPNVVT 821



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 228/479 (47%), Gaps = 33/479 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   +++ +C + K+ +A K++  M      +PD      LI G  R  +I+ A ++L  
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G   +    N ++ G CKRG+I  A  ++  M     +PD  +YNT+L      G 
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A       L++G  P ++TY  L++ +C+      A+++   M   G +PD V Y++
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYST 477

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++   K   ++ A  +  ++L+RG   + IT+NT++  L   G     ++I D M +  
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP   TY  LI+G CK   V +A      M  +   P I  YN+++  L K   L E  
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXT 597

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            LL  +     +P ++TY  LIDG  K+G ++KA   Y +M ENG+S + I   T++ G 
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657

Query: 478 CRADQVEEAVDLLKEIGKRG----------NKMRNSA----------------------Y 505
            R  +++EA  L++++   G          + +R +A                      Y
Sbjct: 658 YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 717

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            + I GLCK+ KVD A +   ++    + PD+  + T++   +  G  +EA++L  +++
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 776



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 212/453 (46%), Gaps = 3/453 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+  C  G   DA ++  +M +    PD      L+ GL +++  E AS + + +
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G     IT+N M+ GLCK G++  A  + D+M   GC PD ITY T++         
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA        R+   P +  Y  LI  + K   +    ++L +M I G +P+IVTY +L
Sbjct: 559 GQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPNIVTYGAL 618

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G  D A      +   G+  N I  +T++  L   G  D  + ++  M +   
Sbjct: 619 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    +   +    +Y  + +  +S ++       P+ + YN  +  LCK G +++A +
Sbjct: 679 FPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARR 735

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
              +L+     P   TY TLI G +  G +++A  L  +M+  G+ P+ +T+  LI G C
Sbjct: 736 FFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 795

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +++ V+ A  L  ++ ++G       Y  +I G CK   +D A ++ + MI     P   
Sbjct: 796 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVV 855

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
            +S ++  +   G  E + KL  ++I+  V  K
Sbjct: 856 TYSALINGLCKHGDIERSMKLLNQMIKAGVDSK 888



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 211/448 (47%), Gaps = 1/448 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC  GK+ +A+  +  M      P+     +LI G + +  +E A  VL+ M   G
Sbjct: 232 MVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKG 291

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQA 241
              + +TY +++ G CK+ ++  A  +L  M   +   PD   Y  ++      GK   A
Sbjct: 292 VSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDA 351

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +    + LR G    L     LI   CK+  I  A  V+  M      PD  +YN+L++ 
Sbjct: 352 VRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDG 411

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C++G   +A  + + +L  G+EP  +TYNTLL  L   G +D   +I  +M +   +P 
Sbjct: 412 YCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPD 471

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
              Y+ L++GL K    + A   +  ++++      +T+NT++  LCK G + EA ++  
Sbjct: 472 EVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFD 531

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +    CSP  ITY TLIDG  K   + +A  + G M    ISP    + +LI G  ++ 
Sbjct: 532 KMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSR 591

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ E  DLL E+G RG       Y  +I G CK   +D A      M  +    +  + S
Sbjct: 592 RLVEXTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICS 651

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           T+V  +   G  +EA  L QK+++   F
Sbjct: 652 TMVSGLYRLGRIDEANLLMQKMVDHGFF 679



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 214/449 (47%), Gaps = 1/449 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N +L N    G+   A  +   M R   +PD      ++    +  ++++A+  ++ 
Sbjct: 192 RSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKK 251

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+ +TY+ ++ G    G + +A  +L  MS  G   +V+TY  +++      K
Sbjct: 252 MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCK 311

Query: 238 FKQAIGFWKD-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
             +A    +  Q      P    Y +LI+  C+   I  A+ +LD+M   G   ++   N
Sbjct: 312 MDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICN 371

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL+N  CK+G+  +A  VI  ++   ++P+S +YNTLL      G       + D M + 
Sbjct: 372 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 431

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              PTV TYN L+ GLC+ G  D A+  ++ M+     PD V Y+T+L  L K      A
Sbjct: 432 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGA 491

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             L   +     +   IT+NT+I GL K G M +A  ++ +M + G SPD IT+RTLI G
Sbjct: 492 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +C+A  V +A  +   + +         Y  +I GL KS+++     +L  M      P+
Sbjct: 552 YCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLLTEMGIRGLTPN 611

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +  ++     +GM ++A+  + ++ E
Sbjct: 612 IVTYGALIDGWCKEGMLDKAFSSYFEMTE 640



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 181/370 (48%), Gaps = 3/370 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  +C    +  A K+   M R    P      +LI GL +  R+ + + +L
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREXISPSIEMYNSLISGLFKSRRLVEXTDLL 600

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G  P+ +TY  ++ G CK G +  A +   EM+ +G   ++I  +T++  ++  
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 660

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A    +  +  G  P    +   ++   +   I +  + LD+       P+ + Y
Sbjct: 661 GRIDEANLLMQKMVDHGFFP---DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 717

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N  +   CK GK DDA    + L  +G  P++ TY TL+H   + G  D   ++ D M  
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN LINGLCK   VDRA   F+++  K   P++VTYNT++   CK G ++ 
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +     SP ++TY+ LI+GL K G +E++M L  QM++ G+    I + TL+ 
Sbjct: 838 AFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897

Query: 476 GFCRADQVEE 485
           G  +     E
Sbjct: 898 GGFKTSNYNE 907



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 190/403 (47%), Gaps = 11/403 (2%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCK---RGQI--RSAIALLDEMSVSGCEPDV 222
           ++   K++ I+       +T  Y   +  LCK   RG +     + +  E + S   P V
Sbjct: 102 VKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFS---PTV 158

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
             ++ IL+   + G  K A+  + +  + G  P L +   L+  + K      A  V   
Sbjct: 159 --FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQ 216

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G  PD+   + +VN  CK GK D+A   +  + + G+EPN +TY++L++   S G 
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 276

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ-PDIVTYN 401
            +A   +L  M+E   S  V TY +LI G CK   +D A      M  +    PD   Y 
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            ++   C+ G +++A++LL  +        L   N+LI+G  K+G + +A  +  +M++ 
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
            + PD  ++ TL+ G+CR     EA +L  ++ + G +     Y  ++ GLC+    D A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +Q+  LM+     PD+  +ST++  +      E A  LW+ ++
Sbjct: 457 LQIWHLMMKXGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 499



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 71/296 (23%), Positives = 135/296 (45%), Gaps = 17/296 (5%)

Query: 22  WCSRQVSLQHGVVNNHRTQFYSQLRDLGAGRNVSLKCRGLPGNVCIDRVNEVDQ------ 75
           WC      + G+++   + ++ ++ + G   N+ +    + G   + R++E +       
Sbjct: 622 WC------KEGMLDKAFSSYF-EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 76  DEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTD 135
           D      H   +   +R   I K +   SL  S   F+  +    N  +   C  GK+ D
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIAD--SLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732

Query: 136 ASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           A +   +++ +  +PD F +C  LI G      +++A ++   M+  G VP+ +TYN ++
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYC-TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALI 791

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            GLCK   +  A  L  ++   G  P+V+TYNT++      G    A       + +G  
Sbjct: 792 NGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGIS 851

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           P ++TY+ LI  +CK   I R++++L+ M   G    ++ Y +LV    K   Y++
Sbjct: 852 PSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGGFKTSNYNE 907



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 20/247 (8%)

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +   PN  +Y  L+H L     +D     L               N L++ LCK+   DR
Sbjct: 96  QNFRPNVKSYCKLVHILSRGRMYDETRAYL---------------NQLVD-LCKFK--DR 137

Query: 381 AINSFNQMVS--KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
               ++++V   +        ++ +L    ++G+   AL +   +      P L + N+L
Sbjct: 138 GNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSL 197

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           ++ L K G    A  +Y QM+  GI PD      ++  FC+  +V+EA   +K++   G 
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +     Y  +I+G      V+ A  VL+ M       +   ++ ++K        +EA K
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 317

Query: 559 LWQKLIE 565
           + + + E
Sbjct: 318 VLRGMQE 324


>gi|296083214|emb|CBI22850.3| unnamed protein product [Vitis vinifera]
          Length = 724

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 229/452 (50%), Gaps = 5/452 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T N +L+  C   ++  A KL+  M+ +   PD      LI  L ++ ++++A 
Sbjct: 177 MEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAR 236

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M  +  VP    YN ++ G+CK      A  LLDEM   G +P+VI+Y TI+  +
Sbjct: 237 EL--AMSFTPSVP---VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINAL 291

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            D G  + ++        +GC P L T+T LI+    + G   A++  D M  EG  P++
Sbjct: 292 SDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNV 351

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V YN+L++  C +    DAV V N +   G  PN  TY+ L+      G  D   ++ + 
Sbjct: 352 VAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNW 411

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P V  Y  +++ LC+  + ++A      M  +NC P+ VT+NT +  LC  G 
Sbjct: 412 MITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGR 471

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ A+++   +  S C P   TYN L+D L K     +A  L   M   GI  + +T+ T
Sbjct: 472 VDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNT 531

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I+G+C A  + EA++LL ++  RG K       +VI   CK  KV++AIQ+++ + + +
Sbjct: 532 IIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGK 591

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + PD   +++++  +      EEA    ++++
Sbjct: 592 WHPDIIAYTSLISGICTHIGVEEAIVYLRRML 623



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 219/432 (50%), Gaps = 5/432 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE +   ++ + C  GK+ +A +L   M+    +P ++    LI G+ +    E+A ++L
Sbjct: 215 DEVSYTTLISSLCKLGKVKEARELA--MSFTPSVPVYN---ALINGVCKEYTFEEAFQLL 269

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+ I+Y  ++  L   G +  ++A+L +M   GC P++ T+ ++++  F  
Sbjct: 270 DEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLK 329

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+ FW   +R+G  P ++ Y  L+  +C +  +  A+ V + M I GC P++ TY
Sbjct: 330 GGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTY 389

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++   K G  D A  V N +++ G  PN + Y  ++  L     ++    +++ M  
Sbjct: 390 SALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQV 449

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P   T+N  I GLC  G VD AI  F+QM +  C P+  TYN +L +L K+    E
Sbjct: 450 ENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGE 509

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L+  +        L+TYNT+I G    G + +A+ L G+M+  G  PD IT   +I 
Sbjct: 510 AFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            +C+  +V  A+ L+  +          AY  +I G+C    V+ AI  L  M+S    P
Sbjct: 570 AYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISP 629

Query: 536 DDTVFSTIVKKV 547
           +   ++ +V+ +
Sbjct: 630 NVATWNVLVRHL 641



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 198/404 (49%), Gaps = 5/404 (1%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           I++I    R    E+A K    M      P    YN ++  L    + +    +   M  
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G EP+V TYN +L+ +  N +   A     +   KGC P  ++YT LI  +CK   +  
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE 234

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A E+         +P +  YN+L+N  CK+  +++A  +++ ++++G++PN I+Y T+++
Sbjct: 235 ARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIIN 289

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           +L   G  +    +L  M     SP + T+  LI G    G    A++ +++M+ +   P
Sbjct: 290 ALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVP 349

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           ++V YN ++  LC +  L +A+ + + +  + C P + TY+ LIDG AK G ++ A  ++
Sbjct: 350 NVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVW 409

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M+ +G  P+ + +  ++   CR     +A  L++ +           +   I GLC S
Sbjct: 410 NWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            +VD AI+V + M +S   P+ T ++ ++  +  D    EA+ L
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 218/494 (44%), Gaps = 16/494 (3%)

Query: 92  RGLTITKKSHDPSLPS--SDGPF----VENDEKTN----NKILQNFCSRGKLTDASKLID 141
            G ++  K   PS+P   S  P      EN+EK++      +L+       +T A +   
Sbjct: 5   EGCSLLLKVRKPSIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFK 64

Query: 142 IMARRNQIPDFHFCINL-IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
            +A             + I  L     ++    +LQ M + G       +  ++G   + 
Sbjct: 65  SIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRA 124

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G    A+     M     +P V  YN IL  + D  +F+     + +  + G  P + TY
Sbjct: 125 GSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTY 184

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            IL++ +CK   +  A ++L +M+ +GC PD V+Y +L++  CK GK  +A       L+
Sbjct: 185 NILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----RELA 239

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
               P+   YN L++ +     ++   ++LD M      P V +Y  +IN L   G V+ 
Sbjct: 240 MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVEL 299

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           ++    +M ++ C P++ T+ +++     +G  +EAL     +      P ++ YN L+ 
Sbjct: 300 SLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMH 359

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL  K  +  A+ ++ QM  NG  P+  T+  LI G+ +A  ++ A ++   +   G   
Sbjct: 360 GLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHP 419

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              AY  ++  LC++   + A  ++E M      P+   F+T +K +   G  + A K++
Sbjct: 420 NVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVF 479

Query: 561 QKLIEWKVFEKGTT 574
            ++     F   TT
Sbjct: 480 DQMGNSGCFPNTTT 493



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 84/167 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N++L +     +  +A  L+  M  R    +      +I G      + +A ++L  M
Sbjct: 493 TYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKM 552

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V+ G  PD IT N+++   CK+G++  AI L+D +S     PD+I Y +++  +  +   
Sbjct: 553 VVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGV 612

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           ++AI + +  L +G  P + T+ +L+  +    G + A++ LD  +I
Sbjct: 613 EEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSI 659



 Score = 42.4 bits (98), Expect = 0.77,   Method: Compositional matrix adjust.
 Identities = 28/100 (28%), Positives = 49/100 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C +GK+  A +L+D ++     PD     +LI G+     +E+A   L
Sbjct: 560 DAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYL 619

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           + M+  G  P+  T+N++V  L        A+  LD  S+
Sbjct: 620 RRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDASSI 659


>gi|225432035|ref|XP_002273694.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Vitis vinifera]
          Length = 666

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 226/446 (50%), Gaps = 5/446 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+  C   ++  A KL+  M+ +   PD      LI  L ++ ++++A ++   M
Sbjct: 183 TYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEAREL--AM 240

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +  VP    YN ++ G+CK      A  LLDEM   G +P+VI+Y TI+  + D G  
Sbjct: 241 SFTPSVP---VYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNV 297

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + ++        +GC P L T+T LI+    + G   A++  D M  EG  P++V YN+L
Sbjct: 298 ELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNAL 357

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C +    DAV V N +   G  PN  TY+ L+      G  D   ++ + M     
Sbjct: 358 MHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGC 417

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V  Y  +++ LC+  + ++A      M  +NC P+ VT+NT +  LC  G ++ A++
Sbjct: 418 HPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIK 477

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +  S C P   TYN L+D L K     +A  L   M   GI  + +T+ T+I+G+C
Sbjct: 478 VFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGLVKDMEHRGIELNLVTYNTIIYGYC 537

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
            A  + EA++LL ++  RG K       +VI   CK  KV++AIQ+++ + + ++ PD  
Sbjct: 538 CAGMLGEALELLGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDII 597

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            +++++  +      EEA    ++++
Sbjct: 598 AYTSLISGICTHIGVEEAIVYLRRML 623



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/432 (28%), Positives = 219/432 (50%), Gaps = 5/432 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE +   ++ + C  GK+ +A +L   M+    +P ++    LI G+ +    E+A ++L
Sbjct: 215 DEVSYTTLISSLCKLGKVKEARELA--MSFTPSVPVYN---ALINGVCKEYTFEEAFQLL 269

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+ I+Y  ++  L   G +  ++A+L +M   GC P++ T+ ++++  F  
Sbjct: 270 DEMMNKGIDPNVISYTTIINALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLK 329

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+ FW   +R+G  P ++ Y  L+  +C +  +  A+ V + M I GC P++ TY
Sbjct: 330 GGSHEALDFWDRMIREGVVPNVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTY 389

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++   K G  D A  V N +++ G  PN + Y  ++  L     ++    +++ M  
Sbjct: 390 SALIDGYAKAGDLDGASEVWNWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQV 449

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P   T+N  I GLC  G VD AI  F+QM +  C P+  TYN +L +L K+    E
Sbjct: 450 ENCPPNTVTFNTFIKGLCGSGRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGE 509

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L+  +        L+TYNT+I G    G + +A+ L G+M+  G  PD IT   +I 
Sbjct: 510 AFGLVKDMEHRGIELNLVTYNTIIYGYCCAGMLGEALELLGKMVVRGTKPDAITVNIVID 569

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            +C+  +V  A+ L+  +          AY  +I G+C    V+ AI  L  M+S    P
Sbjct: 570 AYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYLRRMLSEGISP 629

Query: 536 DDTVFSTIVKKV 547
           +   ++ +V+ +
Sbjct: 630 NVATWNVLVRHL 641



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/404 (26%), Positives = 198/404 (49%), Gaps = 5/404 (1%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           I++I    R    E+A K    M      P    YN ++  L    + +    +   M  
Sbjct: 115 ISVIGSYRRAGSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKK 174

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G EP+V TYN +L+ +  N +   A     +   KGC P  ++YT LI  +CK   +  
Sbjct: 175 DGMEPNVFTYNILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKE 234

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A E+         +P +  YN+L+N  CK+  +++A  +++ ++++G++PN I+Y T+++
Sbjct: 235 ARELAMSF-----TPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIIN 289

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           +L   G  +    +L  M     SP + T+  LI G    G    A++ +++M+ +   P
Sbjct: 290 ALSDAGNVELSLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVP 349

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           ++V YN ++  LC +  L +A+ + + +  + C P + TY+ LIDG AK G ++ A  ++
Sbjct: 350 NVVAYNALMHGLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVW 409

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M+ +G  P+ + +  ++   CR     +A  L++ +           +   I GLC S
Sbjct: 410 NWMITHGCHPNVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGS 469

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            +VD AI+V + M +S   P+ T ++ ++  +  D    EA+ L
Sbjct: 470 GRVDWAIKVFDQMGNSGCFPNTTTYNELLDSLLKDRRFGEAFGL 513



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 117/494 (23%), Positives = 218/494 (44%), Gaps = 16/494 (3%)

Query: 92  RGLTITKKSHDPSLPS--SDGPF----VENDEKTN----NKILQNFCSRGKLTDASKLID 141
            G ++  K   PS+P   S  P      EN+EK++      +L+       +T A +   
Sbjct: 5   EGCSLLLKVRKPSIPFVLSTNPVPNLKAENEEKSSVLKEADVLKRLKHEHDITLALEYFK 64

Query: 142 IMARRNQIPDFHFCINL-IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
            +A             + I  L     ++    +LQ M + G       +  ++G   + 
Sbjct: 65  SIANSKSFKHTPLTYQMMIEKLASEREMDCVQYLLQQMKLEGISCSEDLFISVIGSYRRA 124

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G    A+     M     +P V  YN IL  + D  +F+     + +  + G  P + TY
Sbjct: 125 GSSEQALKTFYRMQDFRVKPTVKIYNHILDALLDENRFQMINPIYSNMKKDGMEPNVFTY 184

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            IL++ +CK   +  A ++L +M+ +GC PD V+Y +L++  CK GK  +A       L+
Sbjct: 185 NILLKALCKNNRVDGAHKLLVEMSSKGCDPDEVSYTTLISSLCKLGKVKEA-----RELA 239

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
               P+   YN L++ +     ++   ++LD M      P V +Y  +IN L   G V+ 
Sbjct: 240 MSFTPSVPVYNALINGVCKEYTFEEAFQLLDEMMNKGIDPNVISYTTIINALSDAGNVEL 299

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           ++    +M ++ C P++ T+ +++     +G  +EAL     +      P ++ YN L+ 
Sbjct: 300 SLAVLAKMFARGCSPNLHTFTSLIKGFFLKGGSHEALDFWDRMIREGVVPNVVAYNALMH 359

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL  K  +  A+ ++ QM  NG  P+  T+  LI G+ +A  ++ A ++   +   G   
Sbjct: 360 GLCSKRSLGDAVSVFNQMEINGCCPNVRTYSALIDGYAKAGDLDGASEVWNWMITHGCHP 419

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              AY  ++  LC++   + A  ++E M      P+   F+T +K +   G  + A K++
Sbjct: 420 NVVAYTCMVDVLCRNSMFNQAYCLIENMQVENCPPNTVTFNTFIKGLCGSGRVDWAIKVF 479

Query: 561 QKLIEWKVFEKGTT 574
            ++     F   TT
Sbjct: 480 DQMGNSGCFPNTTT 493



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 41/169 (24%), Positives = 75/169 (44%), Gaps = 35/169 (20%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T N I+  +C  G L +A +L                                 
Sbjct: 522 IELNLVTYNTIIYGYCCAGMLGEALEL--------------------------------- 548

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             L  MV+ G  PD IT N+++   CK+G++  AI L+D +S     PD+I Y +++  +
Sbjct: 549 --LGKMVVRGTKPDAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGI 606

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
             +   ++AI + +  L +G  P + T+ +L+  +    G + A++ LD
Sbjct: 607 CTHIGVEEAIVYLRRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLD 655



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 30/104 (28%), Positives = 51/104 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C +GK+  A +L+D ++     PD     +LI G+     +E+A   L
Sbjct: 560 DAITVNIVIDAYCKQGKVNIAIQLMDRLSAGKWHPDIIAYTSLISGICTHIGVEEAIVYL 619

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE 219
           + M+  G  P+  T+N++V  L        A+  LD +  SG E
Sbjct: 620 RRMLSEGISPNVATWNVLVRHLFSNMGHSGAVQFLDAVLGSGFE 663


>gi|302780004|ref|XP_002971777.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
 gi|300160909|gb|EFJ27526.1| hypothetical protein SELMODRAFT_96029 [Selaginella moellendorffii]
          Length = 556

 Score =  223 bits (569), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 141/464 (30%), Positives = 235/464 (50%), Gaps = 15/464 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C  G+ T A + +  +   +  PD +    LI GL +    ++A K+ + M  S 
Sbjct: 68  LIRGNCKAGQATRALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSR 127

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRT-MFDNGKFK 239
             PD  TYN ++ GLCK G +  A  LL+EM   G    PD++TYNT++   +  +G  +
Sbjct: 128 VNPDIFTYNTVISGLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVE 187

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A+         G  P +ITY  +I  +C    +  A E+L  M+   CSPD+VT+N+L+
Sbjct: 188 EALEILDGMKLAGPAPDVITYNSIIHALCVAGRVVEAAEILKTMS---CSPDLVTFNTLL 244

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK G    A+ V+  +    + P+ ITY  L++ L   G       +L+ +    + 
Sbjct: 245 DGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYI 304

Query: 360 PTVFTYNILINGLCKYGLVDRA---------INSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           P V  Y  L++GLCK G ++ A              +MVS N  P + TYN VLG L K+
Sbjct: 305 PDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKD 364

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G +++A+ L+  L      P ++TYNTLIDGL K   + +A  L  +M   G  P+D+T 
Sbjct: 365 GSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTL 424

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            ++++G CR  +V++A  L+ E+ ++ +      Y  +I GLCKS ++D A  VL+ M  
Sbjct: 425 GSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVLDAMRG 484

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
                DD  +  ++  +   G   EA  ++ +++       G+T
Sbjct: 485 QGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGST 528



 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 137/466 (29%), Positives = 238/466 (51%), Gaps = 26/466 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++      G    A KL + M      PD      +I GL +   +EKA ++L+ M+ 
Sbjct: 101 NFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGLCKSGNLEKARELLEEMIR 160

Query: 181 SGG--VPDTITYNMMV-GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            GG   PD +TYN ++  G+CK G +  A+ +LD M ++G  PDVITYN+I+  +   G+
Sbjct: 161 RGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPAPDVITYNSIIHALCVAGR 220

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A    K      C P L+T+  L++  CK   + RA+EVL++M  E   PD++TY  
Sbjct: 221 VVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTI 277

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK--------- 348
           LVN  C+ G+   A  ++  ++ +G  P+ I Y +L+  L   G  +   K         
Sbjct: 278 LVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSARE 337

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           IL  M   +  P +FTYNI++ GL K G + +A++  + +V++   PD+VTYNT++  LC
Sbjct: 338 ILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLC 397

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K   + EA  L   +    C P  +T  +++ GL + G ++ A  L  +M     +P+ +
Sbjct: 398 KANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVV 457

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            + +LI G C++D++++A  +L  +  +G  + + AYR +I  +    +V  A+ + + M
Sbjct: 458 VYTSLIDGLCKSDRMDDACVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEM 517

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           ++  + PD +   T+          EEA  +   + EW   E+  +
Sbjct: 518 VARGFLPDGSTSKTL----------EEA-AMSNSVFEWTNLEENAS 552



 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 224/444 (50%), Gaps = 56/444 (12%)

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL- 209
           D H   +L+  L++     +  KV + ++ SG  P+ +T+ +++ G CK GQ   A+   
Sbjct: 26  DVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRALEFL 85

Query: 210 --LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
             LDE SV+   PDV  +N ++  +F +G   QA+  +++       P + TY  +I  +
Sbjct: 86  RALDEFSVA---PDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISGL 142

Query: 268 CKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFS-CKQGKYDDAVLVINNLLSRGME 324
           CK   + +A E+L++M   G   +PDIVTYN+L+N   CK G  ++A+ +++ +   G  
Sbjct: 143 CKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGPA 202

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P+ ITYN+++H+L   G    V +  +I+   S SP + T+N L++G CK G++ RA+  
Sbjct: 203 PDVITYNSIIHALCVAG---RVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEV 259

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH----------------LLNGSSC 428
             +M  +N  PD++TY  ++  LC+ G +  A  LL                 L++G   
Sbjct: 260 LEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCK 319

Query: 429 S----------------------------PCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           S                            P L TYN ++ GL K G + KA+ L   ++ 
Sbjct: 320 SGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLVA 379

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G  PD +T+ TLI G C+A++V EA DL  E+   G    +     V+ GLC+  +VD 
Sbjct: 380 RGYVPDVVTYNTLIDGLCKANRVREACDLADEMASLGCFPNDVTLGSVVFGLCRVGRVDD 439

Query: 521 AIQVLELMISSRYKPDDTVFSTIV 544
           A  ++  M   R+ P+  V+++++
Sbjct: 440 AWSLVVEMSRKRHAPNVVVYTSLI 463



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 119/360 (33%), Positives = 189/360 (52%), Gaps = 15/360 (4%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G + DV +YN +L  +  +G   +    +KD L  GC P L+T+ ILI   CK     RA
Sbjct: 22  GYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATRA 81

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           +E L  +     +PD+  +N L++   K G  D AV +  N+ S  + P+  TYNT++  
Sbjct: 82  LEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVISG 141

Query: 337 LGSRGCWDAVDKILD--IMNEASHSPTVFTYNILIN-GLCKYGLVDRAINSFNQMVSKNC 393
           L   G  +   ++L+  I      +P + TYN LIN G+CK G V+ A+   + M     
Sbjct: 142 LCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAGP 201

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD++TYN+++ ALC  G + EA ++L  +   SCSP L+T+NTL+DG  K G + +A+ 
Sbjct: 202 APDVITYNSIIHALCVAGRVVEAAEILKTM---SCSPDLVTFNTLLDGFCKAGMLPRALE 258

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +  +M    I PD IT+  L+ G CR  QV+ A  LL+EI ++G      AY  ++ GLC
Sbjct: 259 VLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLC 318

Query: 514 KSKKVD---------MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           KS +++          A ++L  M+S    P    ++ ++  +  DG   +A  L   L+
Sbjct: 319 KSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYNIVLGGLIKDGSISKAVSLISDLV 378



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 92/297 (30%), Positives = 147/297 (49%), Gaps = 9/297 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L  FC  G L  A ++++ M R N +PD      L+ GL R+ +++ A  +L
Sbjct: 236 DLVTFNTLLDGFCKAGMLPRALEVLEEMCRENILPDVITYTILVNGLCRVGQVQVAFYLL 295

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS---------GCEPDVITYN 226
           + +V  G +PD I Y  +V GLCK G+I  A  L+ EMS              P + TYN
Sbjct: 296 EEIVRQGYIPDVIAYTSLVDGLCKSGEIEEAHKLVKEMSAREILAEMVSINMVPPLFTYN 355

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            +L  +  +G   +A+    D + +G  P ++TY  LI+ +CK   +  A ++ D+MA  
Sbjct: 356 IVLGGLIKDGSISKAVSLISDLVARGYVPDVVTYNTLIDGLCKANRVREACDLADEMASL 415

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GC P+ VT  S+V   C+ G+ DDA  ++  +  +   PN + Y +L+  L      D  
Sbjct: 416 GCFPNDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDA 475

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             +LD M     +   F Y  LI  +   G V  A+  +++MV++   PD  T  T+
Sbjct: 476 CVVLDAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTL 532



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 95/313 (30%), Positives = 156/313 (49%), Gaps = 35/313 (11%)

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +G   D+ +YN L++   K G       V  +LL  G  PN +T+  L+      G    
Sbjct: 21  DGYKHDVHSYNHLLDILVKSGHQFRTGKVYKDLLHSGCSPNLVTFKILIRGNCKAGQATR 80

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             + L  ++E S +P V+ +N LI+GL K G  D+A+  F  M S    PDI TYNTV+ 
Sbjct: 81  ALEFLRALDEFSVAPDVYIFNFLIHGLFKDGNPDQAVKLFENMESSRVNPDIFTYNTVIS 140

Query: 406 ALCKEGMLNEALQLLH--LLNGSSCSPCLITYNTLID-GLAKKGCMEKAMVLYGQMMENG 462
            LCK G L +A +LL   +  G   +P ++TYNTLI+ G+ K G +E+A+ +   M   G
Sbjct: 141 GLCKSGNLEKARELLEEMIRRGGKSAPDIVTYNTLINAGICKDGDVEEALEILDGMKLAG 200

Query: 463 ISPDDITH--------------------------------RTLIWGFCRADQVEEAVDLL 490
            +PD IT+                                 TL+ GFC+A  +  A+++L
Sbjct: 201 PAPDVITYNSIIHALCVAGRVVEAAEILKTMSCSPDLVTFNTLLDGFCKAGMLPRALEVL 260

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +E+ +         Y ++++GLC+  +V +A  +LE ++   Y PD   ++++V  +   
Sbjct: 261 EEMCRENILPDVITYTILVNGLCRVGQVQVAFYLLEEIVRQGYIPDVIAYTSLVDGLCKS 320

Query: 551 GMTEEAYKLWQKL 563
           G  EEA+KL +++
Sbjct: 321 GEIEEAHKLVKEM 333



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 35/124 (28%), Positives = 58/124 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T   ++   C  G++ DA  L+  M+R+   P+     +LI GL + DR++ A  VL
Sbjct: 420 NDVTLGSVVFGLCRVGRVDDAWSLVVEMSRKRHAPNVVVYTSLIDGLCKSDRMDDACVVL 479

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G   D   Y  ++  +   G++  A+A+ DEM   G  PD  T  T+      N
Sbjct: 480 DAMRGQGVALDDFAYRKLIVSMIHGGRVAEAMAMYDEMVARGFLPDGSTSKTLEEAAMSN 539

Query: 236 GKFK 239
             F+
Sbjct: 540 SVFE 543


>gi|302763353|ref|XP_002965098.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
 gi|300167331|gb|EFJ33936.1| hypothetical protein SELMODRAFT_83321 [Selaginella moellendorffii]
          Length = 600

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 224/452 (49%), Gaps = 1/452 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++      G++ D  K  + M+  + +P       +I GL +   +  A KV + MV  G
Sbjct: 149 VIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKG 208

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPDTITY  ++ G  K  ++  A  LLD M   G EP  +TY +I+          +A 
Sbjct: 209 CVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAK 268

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   +GC P L  +T L+     +     A +VL +M   GC+PD++ Y SL++  
Sbjct: 269 EVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLL 328

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
              G+  +A  V ++++ +G  P+++TY T++ +    G  +A  +IL++M ++   P  
Sbjct: 329 FSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEAAGEILELMAKSGVGPDC 388

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-H 421
           F YN L++G  K   VD+A   +++MV+   +P+ VT+N ++  L K+G  + A  L   
Sbjct: 389 FAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMHGLFKDGKTDRAFSLFKE 448

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           +L      P L++Y  LIDGL K G + +A + + +M++ GI P+  T+ +LI+   +A 
Sbjct: 449 MLEKEEVPPTLVSYTILIDGLGKAGRVSEAFLQFQEMIDRGIIPECHTYTSLIYSLAKAG 508

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ EA  L++++ K G      AY  +I GL  S  VD A  V + M+     P++  + 
Sbjct: 509 RIPEAKKLVEDMVKLGVNPDVQAYSALITGLIDSSMVDTAWDVFQEMMKRGCAPNEVTYK 568

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
            + +     G   +   + Q   +    E G+
Sbjct: 569 VLRRGFRAAGRALDLEAVKQHFSQGVAMEAGS 600



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 215/440 (48%), Gaps = 31/440 (7%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ-------------- 202
            +I GL  ID++++A K    M+ +G  PD I +  ++ G CK GQ              
Sbjct: 12  TVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCKAGQPQVGHKLLNQALKR 71

Query: 203 IRSAIAL-------------LDEMSVSGCEP----DVITYNTILRTMFDNGKFKQAIGFW 245
            R  + L             LD        P    DVI+Y T+++ + D+ +  +A   +
Sbjct: 72  FRPDVFLYTSVIHGYCKAGDLDTGYFRAVTPKASLDVISYTTVIKGLADSKRIDEACELF 131

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           ++    GC P ++ YT +I+ + K   I   ++  ++M+   C P   TY  +++  CK 
Sbjct: 132 EELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSSCVPTRTTYTVVIDGLCKA 191

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
               DA  V   ++ +G  P++ITY TL+         D   K+LD+M      PT  TY
Sbjct: 192 QMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVMLTKGPEPTAVTY 251

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
             +++G CK  +++ A     QM  + C+P +  + ++L     +G   EA Q+L  +  
Sbjct: 252 GSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRAEEAYQVLTEMTA 311

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
             C+P +I Y +LID L   G + +A  ++  M+E G +PD +T+ T+I  F +   VE 
Sbjct: 312 RGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTIIQNFSKIGNVEA 371

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A ++L+ + K G      AY  ++ G  K ++VD A  V + M++S  KP+   F+ ++ 
Sbjct: 372 AGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGIKPNAVTFNVLMH 431

Query: 546 KVADDGMTEEAYKLWQKLIE 565
            +  DG T+ A+ L+++++E
Sbjct: 432 GLFKDGKTDRAFSLFKEMLE 451



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/407 (28%), Positives = 200/407 (49%), Gaps = 39/407 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C    L DA K+ + M ++  +PD      LI G  +  ++++A K+L +M
Sbjct: 180 TYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEARKLLDVM 239

Query: 179 VMSGGVPDTITYNMMVGGLCK-----------------------------------RGQI 203
           +  G  P  +TY  +V G CK                                   +G+ 
Sbjct: 240 LTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYYLSKGRA 299

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A  +L EM+  GC PDVI Y +++  +F  G+  +A   +   + KGC P  +TY  +
Sbjct: 300 EEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIEKGCAPDALTYGTI 359

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+   K   +  A E+L+ MA  G  PD   YNSL++   K  + D A  V + +++ G+
Sbjct: 360 IQNFSKIGNVEAAGEILELMAKSGVGPDCFAYNSLMDGYVKLERVDQAFGVYDRMVASGI 419

Query: 324 EPNSITYNTLLHSLGSRGCWD-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +PN++T+N L+H L   G  D A     +++ +    PT+ +Y ILI+GL K G V  A 
Sbjct: 420 KPNAVTFNVLMHGLFKDGKTDRAFSLFKEMLEKEEVPPTLVSYTILIDGLGKAGRVSEAF 479

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             F +M+ +   P+  TY +++ +L K G + EA +L+  +     +P +  Y+ LI GL
Sbjct: 480 LQFQEMIDRGIIPECHTYTSLIYSLAKAGRIPEAKKLVEDMVKLGVNPDVQAYSALITGL 539

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
                ++ A  ++ +MM+ G +P+++T++ L  GF  A +   A+DL
Sbjct: 540 IDSSMVDTAWDVFQEMMKRGCAPNEVTYKVLRRGFRAAGR---ALDL 583



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 98/353 (27%), Positives = 173/353 (49%), Gaps = 12/353 (3%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           GCEP +++YNT++  +    K  +A  F+   +  GC P +I +T LI   CK  G  + 
Sbjct: 2   GCEPTIVSYNTVISGLASIDKMDEAYKFFNSMIDNGCEPDVIAFTTLIHGFCK-AGQPQV 60

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS----ITYNT 332
              L + A++   PD+  Y S+++  CK G  D           R + P +    I+Y T
Sbjct: 61  GHKLLNQALKRFRPDVFLYTSVIHGYCKAGDLDTGYF-------RAVTPKASLDVISYTT 113

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           ++  L      D   ++ + +  A  SP V  Y  +I+GL K G ++  + +F +M   +
Sbjct: 114 VIKGLADSKRIDEACELFEELKTAGCSPNVVAYTAVIDGLLKAGRIEDGLKNFEEMSGSS 173

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C P   TY  V+  LCK  ML +A ++   +    C P  ITY TLIDG +K   M++A 
Sbjct: 174 CVPTRTTYTVVIDGLCKAQMLPDACKVFEQMVQKGCVPDTITYTTLIDGFSKASKMDEAR 233

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L   M+  G  P  +T+ +++ GFC+ D + EA +++ ++ +RG +     +  ++   
Sbjct: 234 KLLDVMLTKGPEPTAVTYGSIVHGFCKLDMINEAKEVIAQMRERGCEPGLFIFTSLLSYY 293

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               + + A QVL  M +    PD  ++++++  +   G   EA  ++  +IE
Sbjct: 294 LSKGRAEEAYQVLTEMTARGCAPDVILYTSLIDLLFSTGRVPEARHVFDSMIE 346


>gi|356529507|ref|XP_003533332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 236/452 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  FC  G++T    ++  + +R   P       LI+GL    ++ KA 
Sbjct: 90  IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKAL 149

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                ++  G   D ++Y  ++ G+CK G  R AI L+ ++     +P+V  YNTI+  +
Sbjct: 150 HFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDAL 209

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                  +A G + +   KG    ++TYT LI   C    +  AI +L++M ++  +P++
Sbjct: 210 CKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNV 269

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN LV+  CK+GK  +A  V+  +L   ++P+ ITY+TL+              + + 
Sbjct: 270 YTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNA 329

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+    +P V +Y ILING CK  +VD A+N F +M  KN  P IVTY++++  LCK G 
Sbjct: 330 MSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++    L+  +        +ITYN+LIDGL K G +++A+ L+ +M + GI P   T   
Sbjct: 390 ISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKMKDQGIRPCSFTFTI 449

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++++A +  +++  +G  +    Y ++I+G CK   ++ A+ +L  M  + 
Sbjct: 450 LLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHCKQGLLEEALTMLSKMEENG 509

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+   F  I+  +      ++A KL +++I
Sbjct: 510 CVPNAVTFDIIINALFKKDENDKAEKLLRQMI 541



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 220/445 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           NKIL +F      + A  L   +  +   PD      LI     + +I     VL  ++ 
Sbjct: 63  NKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILK 122

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P TIT+  ++ GLC +GQ+  A+   D++   G + D ++Y T++  +   G  + 
Sbjct: 123 RGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGVCKIGDTRG 182

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI   +    +   P +  Y  +I+ +CK   ++ A  +  +M  +G S D+VTY +L+ 
Sbjct: 183 AIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIY 242

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C   K  +A+ ++N ++ + + PN  TYN L+ +L   G       +L +M +A   P
Sbjct: 243 GFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKP 302

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY+ L++G      + +A + FN M      PD+ +Y  ++   CK  M++EAL L 
Sbjct: 303 DVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLF 362

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++  +  P ++TY++LIDGL K G +     L  +M + GI  + IT+ +LI G C+ 
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKN 422

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             ++ A+ L  ++  +G +  +  + +++ GLCK  ++  A +  + +++  Y  D   +
Sbjct: 423 GHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKY 482

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           + ++      G+ EEA  +  K+ E
Sbjct: 483 NVMINGHCKQGLLEEALTMLSKMEE 507



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 204/423 (48%), Gaps = 10/423 (2%)

Query: 81  ESHVLAVNKKLRGLTITKKS------HDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLT 134
           + H +     ++GL +  +       HD  L       ++ D+ +   ++   C  G   
Sbjct: 126 QPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQG----IKFDQVSYGTLINGVCKIGDTR 181

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
            A KL+  +  R   P+      +I  L +   + +A  +   M   G   D +TY  ++
Sbjct: 182 GAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLI 241

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            G C   +++ AI LL+EM +    P+V TYN ++  +   GK K+A       L+    
Sbjct: 242 YGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVK 301

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P +ITY+ L++       + +A  V + M++ G +PD+ +Y  L+N  CK    D+A+ +
Sbjct: 302 PDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNL 361

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
              +  + M P  +TY++L+  L   G    V  ++D M +      V TYN LI+GLCK
Sbjct: 362 FKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCK 421

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G +DRAI  FN+M  +  +P   T+  +L  LCK G L +A +    L        +  
Sbjct: 422 NGHLDRAIALFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYK 481

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           YN +I+G  K+G +E+A+ +  +M ENG  P+ +T   +I    + D+ ++A  LL+++ 
Sbjct: 482 YNVMINGHCKQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMI 541

Query: 495 KRG 497
            RG
Sbjct: 542 CRG 544



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/399 (27%), Positives = 195/399 (48%)

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           I  ++ A      M+     P  I +N ++    K     +A++L   + + G +PD+IT
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
            N ++      G+           L++G  P+ IT+T LI+ +C +  + +A+   D + 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLL 156

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +G   D V+Y +L+N  CK G    A+ ++  +  R  +PN   YNT++ +L       
Sbjct: 157 AQGIKFDQVSYGTLINGVCKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVS 216

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +   M     S  V TY  LI G C    +  AI   N+MV K   P++ TYN ++
Sbjct: 217 EAYGLFSEMTAKGISADVVTYTTLIYGFCIASKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            ALCKEG + EA  +L ++  +   P +ITY+TL+DG      ++KA  ++  M   G++
Sbjct: 277 DALCKEGKVKEAKNVLAVMLKACVKPDVITYSTLMDGYFLVYELKKAQHVFNAMSLMGVT 336

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD  ++  LI GFC+   V+EA++L KE+ ++        Y  +I GLCKS ++     +
Sbjct: 337 PDVHSYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRISYVWDL 396

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++ M       +   +++++  +  +G  + A  L+ K+
Sbjct: 397 IDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIALFNKM 435



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 182/355 (51%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG   + + +  N I+   C    +++A  L   M  +    D      LI G     ++
Sbjct: 191 DGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADVVTYTTLIYGFCIASKL 250

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           ++A  +L  MV+    P+  TYN++V  LCK G+++ A  +L  M  +  +PDVITY+T+
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKNVLAVMLKACVKPDVITYSTL 310

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +   F   + K+A   +      G  P + +YTILI   CK   +  A+ +  +M  +  
Sbjct: 311 MDGYFLVYELKKAQHVFNAMSLMGVTPDVHSYTILINGFCKNKMVDEALNLFKEMHQKNM 370

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P IVTY+SL++  CK G+      +I+ +  RG+  N ITYN+L+  L   G  D    
Sbjct: 371 VPGIVTYSSLIDGLCKSGRISYVWDLIDEMRDRGIPANVITYNSLIDGLCKNGHLDRAIA 430

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + + M +    P  FT+ IL++GLCK G +  A  +F  +++K    D+  YN ++   C
Sbjct: 431 LFNKMKDQGIRPCSFTFTILLDGLCKGGRLKDAQEAFQDLLTKGYHLDVYKYNVMINGHC 490

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           K+G+L EAL +L  +  + C P  +T++ +I+ L KK   +KA  L  QM+  G+
Sbjct: 491 KQGLLEEALTMLSKMEENGCVPNAVTFDIIINALFKKDENDKAEKLLRQMICRGL 545



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 97/207 (46%)

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
           H+P +  +N +++   K      A++  +++  K  QPD++T N ++   C  G +    
Sbjct: 55  HTPPIIQFNKILDSFAKIKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGF 114

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L  +      P  IT+ TLI GL  KG + KA+  + +++  GI  D +++ TLI G 
Sbjct: 115 SVLAKILKRGYQPHTITFTTLIKGLCLKGQVNKALHFHDKLLAQGIKFDQVSYGTLINGV 174

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+      A+ L+++I  R  K     Y  +I  LCK + V  A  +   M +     D 
Sbjct: 175 CKIGDTRGAIKLVRKIDGRLTKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTAKGISADV 234

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
             ++T++         +EA  L  +++
Sbjct: 235 VTYTTLIYGFCIASKLKEAIGLLNEMV 261


>gi|30840327|emb|CAD61286.1| fertility restorer homologue [Raphanus sativus]
 gi|134302843|gb|ABO70665.1| restorer-of-fertility [Raphanus sativus]
 gi|157931526|gb|ABW04887.1| PPR [Raphanus sativus]
 gi|194295008|gb|ABO70666.2| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 228/457 (49%), Gaps = 12/457 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C   ++++A  L   M      P+      L+ GL R  RI +A  +L
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFD 234
             M+  G  P  ITY  +V G+CK+G   SA+ LL +M  VS   P+V+ Y+ I+ ++  
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G+   A   + +   KG  P L TY  +I   C     + A ++L +M     SPD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N   K+GK+ +A  + + +L RG+ PN+ITY++++     +   DA + +  +M 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               SP + T+N LI+G C    +D  +   ++M       D  TYNT++      G LN
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-----------NGI 463
            AL LL  +  S   P ++T +TL+DGL   G ++ A+ ++  M +           NG+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD  T+  LI G     +  EA +L +E+  RG       Y  +I GLCK  ++D A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           + + M S  + P+   F+T++      G  ++  +L+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 221/457 (48%), Gaps = 12/457 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   I+   C +G    A  L+  M   + I P+      +I  L +  R   A  +   
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD  TYN M+ G C  G+   A  LL EM      PDV+TYN ++      GK
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A   + + L +G  P  ITY+ +I+  CKQ  +  A  +   MA +GCSP+++T+N+
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C   + DD + +++ +   G+  ++ TYNTL+H     G  +A   +L  M  + 
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-----------NCQPDIVTYNTVLGA 406
             P + T + L++GLC  G +  A+  F  M                +PD+ TYN ++  
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           L  EG   EA +L   +      P  ITY+++IDGL K+  +++A  ++  M     SP+
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T  TLI G+C+A +V++ ++L  E+G+RG       Y  +I G  K   ++ A+ + +
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            MISS   PD      ++  +      + A  + +KL
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 225/453 (49%), Gaps = 13/453 (2%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDF-HFCINLIRGLIRIDRIEKASKVLQIMVM 180
           K+   F     L DA  L   M R   +P    FC  L+  ++R++R +    + Q M  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFC-KLMGVVVRMERPDLVISLYQKMER 107

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
                D  ++ +++   C   ++  A++   +++  G  PDV+T+NT+L  +    +  +
Sbjct: 108 KQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSE 167

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +       C P ++T+T L+  +C++  I  A+ +LD M  +G  P  +TY ++V+
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 301 FSCKQGKYDDAVLVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
             CK+G   D V  +N  L R ME      PN + Y+ ++ SL   G       +   M 
Sbjct: 228 GMCKKG---DTVSALN--LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E    P +FTYN +I G C  G    A     +M+ +   PD+VTYN ++ A  KEG   
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +L   +      P  ITY+++IDG  K+  ++ A  ++  M   G SP+ IT  TLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C A ++++ ++LL E+ + G     + Y  +IHG      ++ A+ +L+ MISS   
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           PD     T++  + D+G  ++A ++++ + + K
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 200/400 (50%), Gaps = 18/400 (4%)

Query: 112 FVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           F E  EK       T N ++  FCS G+ +DA +L+  M  R   PD      LI   ++
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             +  +A ++   M+  G +P+TITY+ M+ G CK+ ++ +A  +   M+  GC P++IT
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           +NT++       +    +    +    G      TY  LI        +  A+++L +M 
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-----------GMEPNSITYNTL 333
             G  PDIVT ++L++  C  GK  DA+ +   +              G+EP+  TYN L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L + G +   +++ + M      P   TY+ +I+GLCK   +D A   F+ M SK+ 
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P++VT+ T++   CK G +++ L+L   +         ITY TLI G  K G +  A+ 
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           ++ +M+ +G+ PD IT R ++ G    ++++ AV +L+++
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 207/410 (50%), Gaps = 1/410 (0%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           + L  G   I  +E A  +   M+ S  +P  + +  ++G + +  +    I+L  +M  
Sbjct: 48  LKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMER 107

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
                D+ ++  +++      K   A+  +    + G  P ++T+  L+  +C +  ++ 
Sbjct: 108 KQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSE 167

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ +   M    C P++VT+ +L+N  C++G+  +AV +++ ++  G++P  ITY T++ 
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 336 SLGSRGCWDAVDKILDIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            +  +G   +   +L  M E SH  P V  Y+ +I+ LCK G    A N F +M  K   
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD+ TYN+++   C  G  ++A QLL  +     SP ++TYN LI+   K+G   +A  L
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y +M+  GI P+ IT+ ++I GFC+ ++++ A  +   +  +G       +  +I G C 
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +K++D  +++L  M  +    D T ++T++      G    A  L Q++I
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 11/319 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC + +L  A  +  +MA +   P+      LI G     RI+   ++L  M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G V DT TYN ++ G    G + +A+ LL EM  SG  PD++T +T+L  + DNGK 
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 239 KQAIGFWKDQLRK-----------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           K A+  +K   +            G  P + TY ILI  +  +     A E+ ++M   G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD +TY+S+++  CKQ + D+A  + +++ S+   PN +T+ TL++     G  D   
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M          TY  LI G  K G ++ A++ F +M+S    PD +T   +L  L
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661

Query: 408 CKEGMLNEALQLLHLLNGS 426
             +  L  A+ +L  L  S
Sbjct: 662 WSKEELKRAVAMLEKLQMS 680


>gi|152717466|dbj|BAF73724.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 139/457 (30%), Positives = 228/457 (49%), Gaps = 12/457 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C   ++++A  L   M      P+      L+ GL R  RI +A  +L
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFD 234
             M+  G  P  ITY  +V G+CK+G   SA+ LL +M  VS   P+V+ Y+ I+ ++  
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G+   A   + +   KG  P L TY  +I   C     + A ++L +M     SPD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N   K+GK+ +A  + + +L RG+ PN+ITY++++     +   DA + +  +M 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               SP + T+N LI+G C    +D  +   ++M       D  TYNT++      G LN
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-----------NGI 463
            AL LL  +  S   P ++T +TL+DGL   G ++ A+ ++  M +           NG+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD  T+  LI G     +  EA +L +E+  RG       Y  +I GLCK  ++D A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           + + M S  + P+   F+T++      G  ++  +L+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 221/457 (48%), Gaps = 12/457 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   I+   C +G    A  L+  M   + I P+      +I  L +  R   A  +   
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD  TYN M+ G C  G+   A  LL EM      PDV+TYN ++      GK
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A   + + L +G  P  ITY+ +I+  CKQ  +  A  +   MA +GCSP+++T+N+
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C   + DD + +++ +   G+  ++ TYNTL+H     G  +A   +L  M  + 
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-----------NCQPDIVTYNTVLGA 406
             P + T + L++GLC  G +  A+  F  M                +PD+ TYN ++  
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           L  EG   EA +L   +      P  ITY+++IDGL K+  +++A  ++  M     SP+
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T  TLI G+C+A +V++ ++L  E+G+RG       Y  +I G  K   ++ A+ + +
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            MISS   PD      ++  +      + A  + +KL
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 225/453 (49%), Gaps = 13/453 (2%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDF-HFCINLIRGLIRIDRIEKASKVLQIMVM 180
           K+   F     L DA  L   M R   +P    FC  L+  ++R++R +    + Q M  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFC-KLMGVVVRMERPDLVISLYQKMER 107

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
                D  ++ +++   C   ++  A++   +++  G  PDV+T+NT+L  +    +  +
Sbjct: 108 KQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSE 167

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +       C P ++T+T L+  +C++  I  A+ +LD M  +G  P  +TY ++V+
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 301 FSCKQGKYDDAVLVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
             CK+G   D V  +N  L R ME      PN + Y+ ++ SL   G       +   M 
Sbjct: 228 GMCKKG---DTVSALN--LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E    P +FTYN +I G C  G    A     +M+ +   PD+VTYN ++ A  KEG   
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +L   +      P  ITY+++IDG  K+  ++ A  ++  M   G SP+ IT  TLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C A ++++ ++LL E+ + G     + Y  +IHG      ++ A+ +L+ MISS   
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           PD     T++  + D+G  ++A ++++ + + K
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 207/410 (50%), Gaps = 1/410 (0%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           + L  G   I  +E A  +   M+ S  +P  + +  ++G + +  +    I+L  +M  
Sbjct: 48  LKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMER 107

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
                D+ ++  +++      K   A+  +    + G  P ++T+  L+  +C +  ++ 
Sbjct: 108 KQIRCDIYSFTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFNTLLHGLCVEDRVSE 167

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ +   M    C P++VT+ +L+N  C++G+  +AV +++ ++  G++P  ITY T++ 
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 336 SLGSRGCWDAVDKILDIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            +  +G   +   +L  M E SH  P V  Y+ +I+ LCK G    A N F +M  K   
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD+ TYN+++   C  G  ++A QLL  +     SP ++TYN LI+   K+G   +A  L
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y +M+  GI P+ IT+ ++I GFC+ ++++ A  +   +  +G       +  +I G C 
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +K++D  +++L  M  +    D T ++T++      G    A  L Q++I
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 200/400 (50%), Gaps = 18/400 (4%)

Query: 112 FVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           F E  EK       T N ++  FCS G+ +DA +L+  M  R   PD      LI   ++
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             +  +A ++   M+  G +P+TITY+ M+ G CK+ ++ +A  +   M+  GC P++IT
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           +NT++       +    +    +    G      TY  LI        +  A+++L +M 
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-----------GMEPNSITYNTL 333
             G  PDIVT ++L++  C  GK  DA+ +   +              G+EP+  TYN L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L + G +   +++ + M      P   TY+ +I+GLCK   +D A   F+ M SK+ 
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P++VT+ T++   CK G +++ L+L   +         ITY TLI G  K G +  A+ 
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           ++ +M+ +G+ PD IT R ++ G    ++++ AV +L+++
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 11/319 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC + +L  A  +  +MA +   P+      LI G     RI+   ++L  M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G V DT TYN ++ G    G + +A+ LL EM  SG  PD++T +T+L  + DNGK 
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 239 KQAIGFWKDQLRK-----------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           K A+  +K   +            G  P + TY ILI  +  +     A E+ ++M   G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD +TY+S+++  CKQ + D+A  + +++ S+   PN +T+ TL++     G  D   
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M          TY  LI G  K G ++ A++ F +M+S    PD +T   +L  L
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661

Query: 408 CKEGMLNEALQLLHLLNGS 426
             +  L  A+ +L  L  S
Sbjct: 662 WSKEELKRAVAMLEKLQMS 680


>gi|12324362|gb|AAG52154.1|AC022355_15 unknown protein; 19199-17308 [Arabidopsis thaliana]
          Length = 558

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 119/409 (29%), Positives = 216/409 (52%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +L+ G     RI  A  ++  MV  G  PDTIT+  ++ GL    +   A+AL+D M   
Sbjct: 84  SLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMVQR 143

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           GC+P+++TY  ++  +   G    A               ++ +  +I+ +CK   +  A
Sbjct: 144 GCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVDDA 203

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + +  +M  +G  P++VTY+SL++  C  G++ DA  ++++++ + + PN +T+N L+ +
Sbjct: 204 LNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALIDA 263

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               G +   +K+ D M + S  P +FTYN LING C +  +D+A   F  MVSK+C PD
Sbjct: 264 FVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCFPD 323

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           + TYNT++   CK   + +  +L   ++        +TY TLI GL   G  + A  ++ 
Sbjct: 324 LDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKVFK 383

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           QM+ +G+ PD +T+  L+ G C   ++E+A+++   + K   K+    Y  +I G+CK+ 
Sbjct: 384 QMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMCKAG 443

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           KVD    +   +     KP+   ++T++  +    + +EAY L +K+ E
Sbjct: 444 KVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKE 492



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 129/457 (28%), Positives = 235/457 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +L  +C   +++DA  L+D M      PD      LI GL   ++  +A  ++  M
Sbjct: 81  TLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRM 140

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+ +TY ++V GLCKRG I  A  LL++M  +  E DV+ +NTI+ ++      
Sbjct: 141 VQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHV 200

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+  +K+   KG  P ++TY+ LI  +C     + A ++L DM  +  +P++VT+N+L
Sbjct: 201 DDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNAL 260

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK+ +A  + ++++ R ++P+  TYN+L++        D   ++ + M     
Sbjct: 261 IDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDC 320

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TYN LI G CK   V+     F +M  +    D VTY T++  L  +G  + A +
Sbjct: 321 FPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQK 380

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +      P ++TY+ L+DGL   G +EKA+ ++  M ++ I  D   + T+I G C
Sbjct: 381 VFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDYMQKSEIKLDIYIYTTMIEGMC 440

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A +V++  DL   +  +G K     Y  +I GLC  + +  A  +L+ M      PD  
Sbjct: 441 KAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRLLQEAYALLKKMKEDGPLPDSG 500

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            ++T+++    DG    + +L +++   +     +T+
Sbjct: 501 TYNTLIRAHLRDGDKAASAELIREMRSCRFVGDASTI 537



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 104/365 (28%), Positives = 190/365 (52%), Gaps = 2/365 (0%)

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI--GFWKDQLRKGCPPYLIT 259
           ++  AI L   M  S   P +  +N +L  +    KF   I        ++ G  P ++T
Sbjct: 22  KLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPSIVT 81

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
            + L+   C    I+ A+ ++D M   G  PD +T+ +L++      K  +AV +++ ++
Sbjct: 82  LSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVDRMV 141

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            RG +PN +TY  +++ L  RG  D    +L+ M  A     V  +N +I+ LCKY  VD
Sbjct: 142 QRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYRHVD 201

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A+N F +M +K  +P++VTY++++  LC  G  ++A QLL  +     +P L+T+N LI
Sbjct: 202 DALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFNALI 261

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           D   K+G   +A  L+  M++  I PD  T+ +LI GFC  D++++A  + + +  +   
Sbjct: 262 DAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGFCMHDRLDKAKQMFEFMVSKDCF 321

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +I G CKSK+V+   ++   M       D   ++T+++ +  DG  + A K+
Sbjct: 322 PDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDTVTYTTLIQGLFHDGDCDNAQKV 381

Query: 560 WQKLI 564
           +++++
Sbjct: 382 FKQMV 386



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 97/334 (29%), Positives = 160/334 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    N I+ + C    + DA  L   M  +   P+     +LI  L    R   AS
Sbjct: 180 IEADVVIFNTIIDSLCKYRHVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDAS 239

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+     P+ +T+N ++    K G+   A  L D+M     +PD+ TYN+++   
Sbjct: 240 QLLSDMIEKKINPNLVTFNALIDAFVKEGKFVEAEKLHDDMIKRSIDPDIFTYNSLINGF 299

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   ++  + K C P L TY  LI+  CK   +    E+  +M+  G   D 
Sbjct: 300 CMHDRLDKAKQMFEFMVSKDCFPDLDTYNTLIKGFCKSKRVEDGTELFREMSHRGLVGDT 359

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY +L+      G  D+A  V   ++S G+ P+ +TY+ LL  L + G  +   ++ D 
Sbjct: 360 VTYTTLIQGLFHDGDCDNAQKVFKQMVSDGVPPDIMTYSILLDGLCNNGKLEKALEVFDY 419

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M ++     ++ Y  +I G+CK G VD   + F  +  K  +P++VTYNT++  LC + +
Sbjct: 420 MQKSEIKLDIYIYTTMIEGMCKAGKVDDGWDLFCSLSLKGVKPNVVTYNTMISGLCSKRL 479

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           L EA  LL  +      P   TYNTLI    + G
Sbjct: 480 LQEAYALLKKMKEDGPLPDSGTYNTLIRAHLRDG 513



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 129/267 (48%), Gaps = 2/267 (0%)

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI--LDIMNEASHSPT 361
           K  K DDA+ +   ++     P+   +N LL ++     +D V  +  L  M +  + P+
Sbjct: 19  KDLKLDDAIGLFGGMVKSRPLPSIFEFNKLLSAIAKMKKFDLVISLALLGKMMKLGYEPS 78

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + T + L+NG C    +  A+   +QMV    +PD +T+ T++  L      +EA+ L+ 
Sbjct: 79  IVTLSSLLNGYCHGKRISDAVALVDQMVEMGYRPDTITFTTLIHGLFLHNKASEAVALVD 138

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +    C P L+TY  +++GL K+G ++ A  L  +M    I  D +   T+I   C+  
Sbjct: 139 RMVQRGCQPNLVTYGVVVNGLCKRGDIDLAFNLLNKMEAAKIEADVVIFNTIIDSLCKYR 198

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            V++A++L KE+  +G +     Y  +I  LC   +   A Q+L  MI  +  P+   F+
Sbjct: 199 HVDDALNLFKEMETKGIRPNVVTYSSLISCLCSYGRWSDASQLLSDMIEKKINPNLVTFN 258

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKV 568
            ++     +G   EA KL   +I+  +
Sbjct: 259 ALIDAFVKEGKFVEAEKLHDDMIKRSI 285


>gi|302799124|ref|XP_002981321.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
 gi|300150861|gb|EFJ17509.1| hypothetical protein SELMODRAFT_114398 [Selaginella moellendorffii]
          Length = 457

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 208/381 (54%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T++YN ++  L K G+        ++M  +GC P+  TY  +LR++    +F++A   ++
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
               +GC P + +Y+ILI  +C+   +  A E+L++M   G  P++VTY SL++  CK G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K  +AV + + ++ RG  P+ + YN L+     +G      ++ + M E    PTVFTYN
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L++G  + G   R  + F  M+ + C P+I T+N +L   CK G + EA +L   +   
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            C P +++YNTLI G+  KG   +A  L  +M+ +G+ PD +++  LI G+ ++  ++ A
Sbjct: 257 GCPPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + L  EI K G +    +Y  +I  LC++ KV  A  V + MI++   PD  V   +V  
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 547 VADDGMTEEAYKLWQKLIEWK 567
           +       E+ +L+Q +++++
Sbjct: 377 LCRGERLTESCELFQAMVKFE 397



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 218/434 (50%), Gaps = 2/434 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           + N +L+     G+        + M     +P+ +    L+R L +  R E+A  V + M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+  +Y++++ GLC+  ++  A  LL+EM   G +P+V+TY ++L  +   GK 
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A+  +   + +GCPP  + Y +LI+   K+  +  A  + ++M  +GC P + TYNSL
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   ++G++     +  ++L +G  PN  T+N LL      G      ++   M     
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V +YN LI G+C  G    A     +M+     PDIV+YN ++    K G L+ A++
Sbjct: 259 PPDVVSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L + +  S   P   +Y+T+ID L + G +  A V++  M+ NG +PD      L+ G C
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R +++ E+ +L + + K         Y L+++ LCK+K+ D   ++   +    + PD  
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVE 438

Query: 539 VFSTIVKKV--ADD 550
           +   I++ +  +DD
Sbjct: 439 ISKVILETLRRSDD 452



 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 211/408 (51%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+  L +  R +        M+ +G VP+T TY  ++  LC+  +   A ++   M+  G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C P+V +Y+ ++  +    K  +A     + +  G  P ++TY  L+  +CK   +  A+
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++   M   GC PD V YN L++   K+G   +A  +   +L +G  P   TYN+LL   
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             +G +  V  +   M      P +FT+N L++G CK G +  A   F +M S  C PD+
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V+YNT++  +C +G  +EA +LL  +  S   P +++YN LIDG +K G ++ A+ L+ +
Sbjct: 263 VSYNTLIRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           + ++G+ PD  ++ T+I   CRA +V  A  + K++   G+    +    ++ GLC+ ++
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +  + ++ + M+     P    ++ ++ K+     +++  +++ +L E
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTE 430



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 104/211 (49%)

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           ++  ++    +YN L+  L K G  D    ++N M++  C P+  TY  +L +LC+    
Sbjct: 9   SQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLAAGCVPNTYTYGYLLRSLCQAQRF 68

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA  +   +    CSP + +Y+ LI GL +   +++A  L  +M++ G  P+ +T+ +L
Sbjct: 69  EEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSL 128

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           + G C+  +++EAVDL   +  RG       Y ++I G  K   +  A ++ E M+    
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            P    +++++   +  G       L++ ++
Sbjct: 189 IPTVFTYNSLLSGFSRKGEFGRVQSLFKDML 219



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  + + I+   C  GK+  A  +   M      PD    I L+ GL R +R+ ++ 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ Q MV    VP    YN+++  LCK  +      +  E++  G  PDV     IL T+
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447


>gi|359492658|ref|XP_002281859.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Vitis vinifera]
          Length = 939

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 218/423 (51%), Gaps = 1/423 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           IL+ +  +G   +A  + D M +  +IP    C +L+  L++      A  V Q M+  G
Sbjct: 162 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVG 221

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD    ++MV   CK G++  A   + +M   G EP+++TY++++      G  + A 
Sbjct: 222 IVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK 281

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC-SPDIVTYNSLVNF 301
           G  K    KG    ++TYT+LI+  CKQC +  A +VL  M  E    PD   Y  L++ 
Sbjct: 282 GVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDG 341

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+ GK DDAV +++ +L  G++ N    N+L++    RG     + ++  M + +  P 
Sbjct: 342 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 401

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++YN L++G C+ G    A N  ++M+ +  +P ++TYNT+L  LC+ G  ++ALQ+ H
Sbjct: 402 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 461

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           L+     +P  + Y+TL+DGL K    E A  L+  ++  G +   IT  T+I G C+  
Sbjct: 462 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMG 521

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ EA ++  ++   G       YR +I G CK+  V  A +V   M      P   +++
Sbjct: 522 KMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYN 581

Query: 542 TIV 544
           +++
Sbjct: 582 SLI 584



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 223/474 (47%), Gaps = 32/474 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+  C  G   DA ++  +M +R   PD      L+ GL +++  E AS + + +
Sbjct: 439 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 498

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G     IT+N M+ GLCK G++  A  + D+M   GC PD ITY T++         
Sbjct: 499 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 558

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA        R+   P +  Y  LI  + K   +    ++L +M I G +P+IVTY +L
Sbjct: 559 GQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 618

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-------------- 344
           ++  CK+G  D A      +   G+  N I  +T++  L   G  D              
Sbjct: 619 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 678

Query: 345 ---------------AVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFN 386
                          A+ KI D ++E+  +   P    YNI I GLCK G VD A   F+
Sbjct: 679 FPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFS 738

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            +  K   PD  TY T++      G ++EA +L   +      P ++TYN LI+GL K  
Sbjct: 739 MLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSE 798

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +++A  L+ ++ + G+ P+ +T+ TLI G+C+   ++ A  L  ++ + G       Y 
Sbjct: 799 NVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISPSVVTYS 858

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            +I+GLCK   ++ ++++L  MI +        + T+V+     G  ++ +KL+
Sbjct: 859 ALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHKLY 912



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/491 (25%), Positives = 224/491 (45%), Gaps = 32/491 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE+    ++  +C  GK+ DA +L+D M R     +   C +LI G  +   I +A  V+
Sbjct: 331 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 390

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV     PD+ +YN ++ G C+ G    A  L D+M   G EP V+TYNT+L+ +   
Sbjct: 391 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 450

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G F  A+  W   +++G  P  + Y+ L++ + K      A  +  D+   G +   +T+
Sbjct: 451 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 510

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++  CK GK  +A  + + +   G  P+ ITY TL+             K+   M  
Sbjct: 511 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 570

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SP++  YN LI+GL K   +    +   +M  +   P+IVTY  ++   CKEGML++
Sbjct: 571 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 630

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD--------- 466
           A      +  +  S  +I  +T++ GL + G +++A +L  +M+++G  PD         
Sbjct: 631 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 690

Query: 467 -----------------------DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
                                  +I +   I G C+  +V++A      +  +G    N 
Sbjct: 691 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 750

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +IHG   +  VD A ++ + M+     P+   ++ ++  +      + A +L+ KL
Sbjct: 751 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 810

Query: 564 IEWKVFEKGTT 574
            +  +F    T
Sbjct: 811 HQKGLFPNVVT 821



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 228/480 (47%), Gaps = 33/480 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   +++ +C + K+ +A K++  M      +PD      LI G  R  +I+ A ++L  
Sbjct: 298 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 357

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G   +    N ++ G CKRG+I  A  ++  M     +PD  +YNT+L      G 
Sbjct: 358 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 417

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A       L++G  P ++TY  L++ +C+      A+++   M   G +PD V Y++
Sbjct: 418 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 477

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++   K   ++ A  +  ++L+RG   + IT+NT++  L   G     ++I D M +  
Sbjct: 478 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 537

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP   TY  LI+G CK   V +A      M  +   P I  YN+++  L K   L E  
Sbjct: 538 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 597

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            LL  +     +P ++TY  LIDG  K+G ++KA   Y +M ENG+S + I   T++ G 
Sbjct: 598 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 657

Query: 478 CRADQVEEAVDLLKEIGKRG----------NKMRNSA----------------------Y 505
            R  +++EA  L++++   G          + +R +A                      Y
Sbjct: 658 YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 717

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            + I GLCK+ KVD A +   ++    + PD+  + T++   +  G  +EA++L  +++ 
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 220/488 (45%), Gaps = 36/488 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N +L N    G+   A  +   M R   +PD      ++    +  ++++A+  ++ 
Sbjct: 192 RSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKK 251

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+ +TY+ ++ G    G + +A  +L  MS  G   +V+TY  +++      K
Sbjct: 252 MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCK 311

Query: 238 FKQAIGFWKD-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
             +A    +  Q      P    Y +LI+  C+   I  A+ +LD+M   G   ++   N
Sbjct: 312 MDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICN 371

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL+N  CK+G+  +A  VI  ++   ++P+S +YNTLL      G       + D M + 
Sbjct: 372 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 431

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              PTV TYN L+ GLC+ G  D A+  ++ M+ +   PD V Y+T+L  L K      A
Sbjct: 432 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGA 491

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             L   +     +   IT+NT+I GL K G M +A  ++ +M + G SPD IT+RTLI G
Sbjct: 492 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 551

Query: 477 FCRADQVEEA-----------------------------------VDLLKEIGKRGNKMR 501
           +C+A  V +A                                    DLL E+G RG    
Sbjct: 552 YCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPN 611

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y  +I G CK   +D A      M  +    +  + ST+V  +   G  +EA  L Q
Sbjct: 612 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQ 671

Query: 562 KLIEWKVF 569
           K+++   F
Sbjct: 672 KMVDHGFF 679



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 107/370 (28%), Positives = 186/370 (50%), Gaps = 3/370 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  +C    +  A K+   M R    P      +LI GL +  R+ + + +L
Sbjct: 541 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 600

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G  P+ +TY  ++ G CK G +  A +   EM+ +G   ++I  +T++  ++  
Sbjct: 601 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 660

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A    +  +  G  P    +   ++   +   I +  + LD+       P+ + Y
Sbjct: 661 GRIDEANLLMQKMVDHGFFP---DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 717

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N  +   CK GK DDA    + L  +G  P++ TY TL+H   + G  D   ++ D M  
Sbjct: 718 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 777

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN LINGLCK   VDRA   F+++  K   P++VTYNT++   CK G ++ 
Sbjct: 778 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 837

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +     SP ++TY+ LI+GL K G +E++M L  QM++ G+    I + TL+ 
Sbjct: 838 AFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQ 897

Query: 476 GFCRADQVEE 485
           G+ R+ ++++
Sbjct: 898 GYIRSGEMQK 907



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 190/403 (47%), Gaps = 11/403 (2%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCK---RGQI--RSAIALLDEMSVSGCEPDV 222
           ++   K++ I+       +T  Y   +  LCK   RG +     + +  E + S   P V
Sbjct: 102 VKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFS---PTV 158

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
             ++ IL+   + G  K A+  + +  + G  P L +   L+  + K      A  V   
Sbjct: 159 --FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQ 216

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G  PD+   + +VN  CK GK D+A   +  + + G+EPN +TY++L++   S G 
Sbjct: 217 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 276

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ-PDIVTYN 401
            +A   +L  M+E   S  V TY +LI G CK   +D A      M  +    PD   Y 
Sbjct: 277 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 336

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            ++   C+ G +++A++LL  +        L   N+LI+G  K+G + +A  +  +M++ 
Sbjct: 337 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 396

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
            + PD  ++ TL+ G+CR     EA +L  ++ + G +     Y  ++ GLC+    D A
Sbjct: 397 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 456

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +Q+  LM+     PD+  +ST++  +      E A  LW+ ++
Sbjct: 457 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 499



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 93/317 (29%), Positives = 148/317 (46%), Gaps = 3/317 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G L  A      M       +   C  ++ GL R+ RI++A+ ++Q M
Sbjct: 614 TYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKM 673

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD   +   +    +   I+     LDE   +   P+ I YN  +  +   GK 
Sbjct: 674 VDHGFFPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKV 730

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F+     KG  P   TY  LI        +  A  + D+M   G  P+IVTYN+L
Sbjct: 731 DDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNAL 790

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK    D A  + + L  +G+ PN +TYNTL+      G  DA  K+ D M E   
Sbjct: 791 INGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGI 850

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP+V TY+ LINGLCK+G ++R++   NQM+       ++ Y T++    + G + +  +
Sbjct: 851 SPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGEMQKIHK 910

Query: 419 LLHLLNGSSCSPCLITY 435
           L  +++    S   I++
Sbjct: 911 LYDMMHIRCLSTTAISH 927



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 134/293 (45%), Gaps = 17/293 (5%)

Query: 22  WCSRQVSLQHGVVNNHRTQFYSQLRDLGAGRNVSLKCRGLPGNVCIDRVNEVDQ------ 75
           WC      + G+++   + ++ ++ + G   N+ +    + G   + R++E +       
Sbjct: 622 WC------KEGMLDKAFSSYF-EMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMV 674

Query: 76  DEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTD 135
           D      H   +   +R   I K +   SL  S   F+  +    N  +   C  GK+ D
Sbjct: 675 DHGFFPDHECFLKSDIRYAAIQKIAD--SLDESCKTFLLPNNIVYNIAIAGLCKTGKVDD 732

Query: 136 ASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           A +   +++ +  +PD F +C  LI G      +++A ++   M+  G VP+ +TYN ++
Sbjct: 733 ARRFFSMLSLKGFVPDNFTYC-TLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALI 791

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            GLCK   +  A  L  ++   G  P+V+TYNT++      G    A       + +G  
Sbjct: 792 NGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGIS 851

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
           P ++TY+ LI  +CK   I R++++L+ M   G    ++ Y +LV    + G+
Sbjct: 852 PSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEYCTLVQGYIRSGE 904



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/218 (24%), Positives = 104/218 (47%), Gaps = 6/218 (2%)

Query: 85  LAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLI 140
           +  N  + GL  T K  D     S+ S  G FV  D  T   ++  + + G + +A +L 
Sbjct: 715 IVYNIAIAGLCKTGKVDDARRFFSMLSLKG-FVP-DNFTYCTLIHGYSAAGNVDEAFRLR 772

Query: 141 DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           D M RR  +P+      LI GL + + +++A ++   +   G  P+ +TYN ++ G CK 
Sbjct: 773 DEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKI 832

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G + +A  L D+M   G  P V+TY+ ++  +  +G  ++++      ++ G    LI Y
Sbjct: 833 GNMDAAFKLKDKMIEEGISPSVVTYSALINGLCKHGDIERSMKLLNQMIKAGVDSKLIEY 892

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             L++   +   + +  ++ D M I   S   +++  +
Sbjct: 893 CTLVQGYIRSGEMQKIHKLYDMMHIRCLSTTAISHKQV 930



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 20/247 (8%)

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +   PN  +Y  L+H L     +D     L               N L++ LCK+   DR
Sbjct: 96  QNFRPNVKSYCKLVHILSRGRMYDETRAYL---------------NQLVD-LCKFK--DR 137

Query: 381 AINSFNQMVS--KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
               ++++V   +        ++ +L    ++G+   AL +   +      P L + N+L
Sbjct: 138 GNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSL 197

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           ++ L K G    A  +Y QM+  GI PD      ++  FC+  +V+EA   +K++   G 
Sbjct: 198 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 257

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +     Y  +I+G      V+ A  VL+ M       +   ++ ++K        +EA K
Sbjct: 258 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 317

Query: 559 LWQKLIE 565
           + + + E
Sbjct: 318 VLRGMQE 324


>gi|356523285|ref|XP_003530271.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g28010-like [Glycine max]
          Length = 703

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 146/484 (30%), Positives = 240/484 (49%), Gaps = 40/484 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQ--IPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           N +L+ FC  G+   A  L   M R     +PD      L+ G  +  R+ +A  + + M
Sbjct: 116 NLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAM 175

Query: 179 VMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL-------- 229
              G   P+ +TY++++   CK G++   + LL+EM   G + DV  Y++++        
Sbjct: 176 KKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGD 235

Query: 230 ----RTMFD-----------------------NGKFKQAIGFWKDQLRKGCPPYLITYTI 262
               R +FD                        G++++A    KD   +G  P ++ YT+
Sbjct: 236 IETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTV 295

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L + +CK      AI+VLD M  +G  P  +TYN +VN  CK+ + DDA  V+  ++ +G
Sbjct: 296 LADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKG 355

Query: 323 MEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASH-SPTVFTYNILINGLCKYGLVDR 380
            +P+++TYNTLL  L G+    +A+D    +++E  H  P VFT N LI GLCK G V  
Sbjct: 356 KKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHD 415

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A    + MV    Q +IVTYN ++        L EAL+L      S  SP  +TY+ +I+
Sbjct: 416 AARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMIN 475

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL K   +  A  L+ +M ++GI P  I +  L+   CR D +E+A  L +E+    + +
Sbjct: 476 GLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNV 535

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              ++ ++I G  K+  V  A ++L  M      PD   FS ++ + +  GM +EA  L+
Sbjct: 536 DVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLY 595

Query: 561 QKLI 564
           +K++
Sbjct: 596 EKMV 599



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 209/424 (49%), Gaps = 13/424 (3%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +P F     L    +       A  VL +M   G   +    N+++ G C+ GQ   A++
Sbjct: 74  LPRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMS 133

Query: 209 LLDEM--SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILI 264
           L  +M  +     PD +TYNT++       +  +A   + + ++KG  C P L+TY++LI
Sbjct: 134 LFSQMKRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLF-EAMKKGGDCRPNLVTYSVLI 192

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           +  CK   +   + +L++M  EG   D+  Y+SL++  C +G  +    + + +L R + 
Sbjct: 193 DCYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVS 252

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN +TY+ L+  LG  G W    ++L  M      P V  Y +L +GLCK G    AI  
Sbjct: 253 PNVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKV 312

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            + MV K  +P  +TYN V+  LCKE  +++A  ++ ++      P  +TYNTL+ GL  
Sbjct: 313 LDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCG 372

Query: 445 KGCMEKAMVLYGQMMENG--ISPDDITHRTLIWGFCRADQVEEAVDL---LKEIGKRGNK 499
            G + +AM L+  ++     + PD  T   LI G C+  +V +A  +   + E+G +GN 
Sbjct: 373 AGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARIHSSMVEMGLQGNI 432

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +    Y  +I G   ++K+  A+++ +  + S + P+   +S ++  +    M   A  L
Sbjct: 433 V---TYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCKMQMLSVARGL 489

Query: 560 WQKL 563
           + K+
Sbjct: 490 FCKM 493



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/427 (28%), Positives = 215/427 (50%), Gaps = 4/427 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++  FC  G +    +L D M RR   P+      L++GL R  R  +AS++L+ M  
Sbjct: 224 SSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLKDMTA 283

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD + Y ++  GLCK G+   AI +LD M   G EP  +TYN ++  +    +   
Sbjct: 284 RGVRPDVVAYTVLADGLCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDD 343

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSL 298
           A G  +  ++KG  P  +TY  L++ +C    I  A+++   +  E     PD+ T N+L
Sbjct: 344 AFGVVEMMVKKGKKPDAVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNL 403

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS-LGSRGCWDAVDKILDIMNEAS 357
           +   CK+G+  DA  + ++++  G++ N +TYN L+   L +R   +A+ K+     E+ 
Sbjct: 404 IQGLCKEGRVHDAARIHSSMVEMGLQGNIVTYNFLIEGYLAARKLIEAL-KLWKYAVESG 462

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP   TY+++INGLCK  ++  A   F +M     +P ++ YN ++ +LC+E  L +A 
Sbjct: 463 FSPNSMTYSVMINGLCKMQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQAR 522

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            L   +   + +  ++++N +IDG  K G ++ A  L  +M    + PD +T   LI  F
Sbjct: 523 SLFQEMRNVNHNVDVVSFNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRF 582

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +   ++EA+ L +++   G+      +  ++ G     + +  I +L  M       D 
Sbjct: 583 SKLGMLDEAMGLYEKMVSCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDS 642

Query: 538 TVFSTIV 544
            + STI+
Sbjct: 643 KLTSTIL 649



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 168/355 (47%), Gaps = 2/355 (0%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  G+  DA K++D+M ++ + P       ++ GL + DR++ A  V+++MV  G  PD
Sbjct: 300 LCKNGRAGDAIKVLDLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPD 359

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDNGKFKQAIGF 244
            +TYN ++ GLC  G+I  A+ L   +       +PDV T N +++ +   G+   A   
Sbjct: 360 AVTYNTLLKGLCGAGKIHEAMDLWKLLLSEKFHVKPDVFTCNNLIQGLCKEGRVHDAARI 419

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
               +  G    ++TY  LIE       +  A+++       G SP+ +TY+ ++N  CK
Sbjct: 420 HSSMVEMGLQGNIVTYNFLIEGYLAARKLIEALKLWKYAVESGFSPNSMTYSVMINGLCK 479

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
                 A  +   +   G+ P  I YN L+ SL      +    +   M   +H+  V +
Sbjct: 480 MQMLSVARGLFCKMKDSGIRPTVIDYNALMTSLCREDSLEQARSLFQEMRNVNHNVDVVS 539

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           +NI+I+G  K G V  A    ++M   +  PD VT++ ++    K GML+EA+ L   + 
Sbjct: 540 FNIIIDGTLKAGDVKSAKELLSEMFMMDLVPDAVTFSILINRFSKLGMLDEAMGLYEKMV 599

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
                P ++ +++L+ G   KG  EK + L  QM +  +  D     T++   C 
Sbjct: 600 SCGHVPGVVVFDSLLKGYGLKGETEKIISLLHQMADKDVVLDSKLTSTILACLCH 654



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 152/321 (47%), Gaps = 5/321 (1%)

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P   + + L E        + A  VL  M   G   ++   N ++   C+ G+ D A+ +
Sbjct: 75  PRFTSLSALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSL 134

Query: 315 INNLLSRGME---PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH-SPTVFTYNILIN 370
            + +  R  +   P+ +TYNTL++             + + M +     P + TY++LI+
Sbjct: 135 FSQM-KRNYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLID 193

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
             CK G V   +    +M  +  + D+  Y++++ A C EG +    +L   +     SP
Sbjct: 194 CYCKSGEVGEGLGLLEEMEREGLKADVFVYSSLISAFCGEGDIETGRELFDEMLRRKVSP 253

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            ++TY+ L+ GL + G   +A  +   M   G+ PD + +  L  G C+  +  +A+ +L
Sbjct: 254 NVVTYSCLMQGLGRTGRWREASEMLKDMTARGVRPDVVAYTVLADGLCKNGRAGDAIKVL 313

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
             + ++G +     Y +V++GLCK  ++D A  V+E+M+    KPD   ++T++K +   
Sbjct: 314 DLMVQKGEEPGTLTYNVVVNGLCKEDRMDDAFGVVEMMVKKGKKPDAVTYNTLLKGLCGA 373

Query: 551 GMTEEAYKLWQKLIEWKVFEK 571
           G   EA  LW+ L+  K   K
Sbjct: 374 GKIHEAMDLWKLLLSEKFHVK 394



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 55/242 (22%), Positives = 109/242 (45%), Gaps = 3/242 (1%)

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P+    +TL+ +L     +DAV  +   M  A   P   + + L            A + 
Sbjct: 40  PSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSLSALTESFVNTHHPSFAFSV 99

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLIDGL 442
            + M  +    ++   N VL   C+ G  ++A+ L   +  N     P  +TYNTL++G 
Sbjct: 100 LSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKRNYDCVVPDCVTYNTLVNGF 159

Query: 443 AKKGCMEKAMVLYGQMMENG-ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
            K   + +A VL+  M + G   P+ +T+  LI  +C++ +V E + LL+E+ + G K  
Sbjct: 160 CKAKRLAEARVLFEAMKKGGDCRPNLVTYSVLIDCYCKSGEVGEGLGLLEEMEREGLKAD 219

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y  +I   C    ++   ++ + M+  +  P+   +S +++ +   G   EA ++ +
Sbjct: 220 VFVYSSLISAFCGEGDIETGRELFDEMLRRKVSPNVVTYSCLMQGLGRTGRWREASEMLK 279

Query: 562 KL 563
            +
Sbjct: 280 DM 281



 Score = 42.0 bits (97), Expect = 0.88,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 65/155 (41%), Gaps = 4/155 (2%)

Query: 413 LNEALQLLH--LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           L++A+ L H  + N  +  P     +TLID L K    +  + +Y +M+   + P   + 
Sbjct: 21  LSDAVSLFHRTIDNDPTSPPSEPACSTLIDNLRKARQYDAVVSVYHKMVSALVLPRFTSL 80

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             L   F        A  +L  + KRG  +      LV+ G C+S + D A+ +   M  
Sbjct: 81  SALTESFVNTHHPSFAFSVLSLMTKRGFGVNVYNLNLVLKGFCRSGQCDKAMSLFSQMKR 140

Query: 531 SR--YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +     PD   ++T+V          EA  L++ +
Sbjct: 141 NYDCVVPDCVTYNTLVNGFCKAKRLAEARVLFEAM 175


>gi|242069957|ref|XP_002450255.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
 gi|241936098|gb|EES09243.1| hypothetical protein SORBIDRAFT_05g002620 [Sorghum bicolor]
          Length = 924

 Score =  223 bits (568), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 232/449 (51%), Gaps = 3/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N ++  F + G++  A  L   M      PD      +I GL +   +++A  V 
Sbjct: 192 DVVSYNIVINGFFNEGQVDKAYSLFLEMGVS---PDVVTYNTIIDGLCKAQEVDRAEDVF 248

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q MV  G  P+ +TYN ++ GLCK  ++  A  +  +M   G +P  +TYNTI+  +   
Sbjct: 249 QQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKA 308

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A G ++  + +G  P  +TY  +I+ +CK   I +A  V   M  +G  PD +TY
Sbjct: 309 QAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTY 368

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             +++  CK    D A  V   ++ +G++PN+ TYN L+H   S G W+ V + +  M+ 
Sbjct: 369 TIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSA 428

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P VFTY +L++ LCK G  + A + F+ M+ K  +P +  Y  +L    K+G L+E
Sbjct: 429 HDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSE 488

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
              LL+L+  +  SP    +NT+I   AK+  +++ M ++ +M + G+SP+ +T+ TLI 
Sbjct: 489 MHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLID 548

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             C+  +V++AV    ++   G    N  +  +++GLC   K +   ++   M++   +P
Sbjct: 549 ALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRP 608

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           D   F+T++  +  +G   EA +L   ++
Sbjct: 609 DIVFFNTVLCNLCKEGRVMEARRLIDSMV 637



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 223/452 (49%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N I+   C   ++  A  +   M  +   P+      +I GL +   ++ A 
Sbjct: 221 VSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAE 280

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V Q MV  G  P  +TYN ++ GLCK   +  A  +  +M   G +PD +TYNTI+  +
Sbjct: 281 GVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGL 340

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                  +A G ++  + KG  P  +TYTI+I+ +CK   + RA  V   M  +G  P+ 
Sbjct: 341 CKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNN 400

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN L++     G++++ V  I  + +  +EP+  TY  LL  L   G  +    + D 
Sbjct: 401 GTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDS 460

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P+V  Y I+++G  K G +    +  N MV+    P+   +NTV+ A  K  M
Sbjct: 461 MIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAM 520

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++E + +   +     SP ++TY TLID L K G ++ A++ + QM+  G++P+++   +
Sbjct: 521 IDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNS 580

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L++G C  D+ E+  +L  E+  +G +     +  V+  LCK  +V  A ++++ M+   
Sbjct: 581 LVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMG 640

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            KPD   ++T++         +EA KL   ++
Sbjct: 641 LKPDVISYNTLIDGHCFASRMDEAVKLLDGMV 672



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 135/480 (28%), Positives = 229/480 (47%), Gaps = 35/480 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C    +  A  +   M  R   PD      +I GL +   I+KA  V Q M
Sbjct: 297 TYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQM 356

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD +TY +++ GLCK   +  A  +  +M   G +P+  TYN ++      G++
Sbjct: 357 IDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTYNCLIHGYLSTGQW 416

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++ +   K+       P + TY +L++ +CK      A  + D M  +G  P +  Y  +
Sbjct: 417 EEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIM 476

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+G   +   ++N +++ G+ PN   +NT++ +   R   D V  I   M +   
Sbjct: 477 LHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGL 536

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC------------------------- 393
           SP V TY  LI+ LCK G VD A+  FNQM+++                           
Sbjct: 537 SPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEE 596

Query: 394 ----------QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
                     +PDIV +NTVL  LCKEG + EA +L+  +      P +I+YNTLIDG  
Sbjct: 597 LFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHC 656

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
               M++A+ L   M+  G+ P+ +++ TL+ G+C+A +++ A  L +E+ ++G      
Sbjct: 657 FASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVE 716

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +++GL +S +   A ++   MI SR       +S I+     +   +EA+K++Q L
Sbjct: 717 TYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSL 776



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 230/454 (50%), Gaps = 18/454 (3%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQI---------PDFHFCINLIRGLIRIDRIEKASKV 174
           L +  SR K + +SKL   ++R N++         PD      +I    RI R+E     
Sbjct: 49  LLSVVSRAKCSSSSKLA--VSRFNRMLRDCSNKVAPDCCTYSIVIGCFCRIGRLELGFAA 106

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-ALLDEMSVSGCEPDVITYNTILRTMF 233
             +++ +G   D I  N ++ GLC   ++  A+  LL +M   GC   V++YNT+L+ + 
Sbjct: 107 FGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLLRQMPEVGCRLGVVSYNTLLKGLC 166

Query: 234 DNGKFKQA---IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
           D  + ++A   +    D     C P +++Y I+I     +  + +A  +  +M   G SP
Sbjct: 167 DRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGFFNEGQVDKAYSLFLEM---GVSP 223

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+VTYN++++  CK  + D A  V   ++ +G++PN++TYNT++  L      D  + + 
Sbjct: 224 DVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNNVTYNTIIDGLCKAQEVDMAEGVF 283

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M +    P+  TYN +I+GLCK   VDRA   F QM+ +  +PD VTYNT++  LCK 
Sbjct: 284 QKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQMIDRGVKPDHVTYNTIIDGLCKA 343

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             +++A  +   +      P  +TY  +IDGL K   +++A  ++ QM++ G+ P++ T+
Sbjct: 344 QAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAEGVFQQMIDKGVKPNNGTY 403

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             LI G+    Q EE V  +KE+     +     Y L++  LCK+ K + A  + + MI 
Sbjct: 404 NCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIR 463

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              KP  T++  ++      G   E + L   ++
Sbjct: 464 KGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMV 497



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 218/455 (47%), Gaps = 4/455 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T   +L   C  GK  +A  L D M R+   P       ++ G  +   + +  
Sbjct: 431 LEPDVFTYGLLLDYLCKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMH 490

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L +MV +G  P+   +N ++    KR  I   + +  +M   G  P+V+TY T++  +
Sbjct: 491 DLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDAL 550

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A+  +   + +G  P  + +  L+  +C      +  E+  +M  +G  PDI
Sbjct: 551 CKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDI 610

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL--HSLGSRGCWDAVDKIL 350
           V +N+++   CK+G+  +A  +I++++  G++P+ I+YNTL+  H   SR   D   K+L
Sbjct: 611 VFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASR--MDEAVKLL 668

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           D M  A   P + +YN L++G CK G +D A   F +M+ K   P + TYNT+L  L + 
Sbjct: 669 DGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRS 728

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G  +EA +L   +  S     + TY+ ++DG  K  C ++A  ++  +    +  D IT 
Sbjct: 729 GRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITF 788

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             +I G  +  + E+A+DL   I   G       YRL+   L +   ++    +  +M  
Sbjct: 789 NIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEK 848

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           S   P+  + + +++K+ D G    A     KL E
Sbjct: 849 SGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDE 883



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/513 (24%), Positives = 230/513 (44%), Gaps = 70/513 (13%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N I+   C    +  A  +   M  +   PD      +I GL +   +++A 
Sbjct: 326 VKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQSVDRAE 385

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V Q M+  G  P+  TYN ++ G    GQ    +  + EMS    EPDV TY  +L  +
Sbjct: 386 GVFQQMIDKGVKPNNGTYNCLIHGYLSTGQWEEVVQRIKEMSAHDLEPDVFTYGLLLDYL 445

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ---------------------- 270
             NGK  +A   +   +RKG  P +  Y I++    K+                      
Sbjct: 446 CKNGKCNEARSLFDSMIRKGIKPSVTIYGIMLHGYGKKGALSEMHDLLNLMVANGISPNH 505

Query: 271 -------CGIAR------AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                  C  A+       + +   M  +G SP++VTY +L++  CK G+ DDAVL  N 
Sbjct: 506 RIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAVLQFNQ 565

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI-LDIMNEASH------------------ 358
           +++ G+ PN++ +N+L++ L +   W+ V+++ L+++N+                     
Sbjct: 566 MINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNLCKEGR 625

Query: 359 ----------------SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                            P V +YN LI+G C    +D A+   + MVS   +P+IV+YNT
Sbjct: 626 VMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNIVSYNT 685

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           +L   CK G ++ A  L   +     +P + TYNT+++GL + G   +A  LY  M+++ 
Sbjct: 686 LLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVNMIKSR 745

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
                 T+  ++ GFC+ +  +EA  + + +     ++    + ++I GL K  + + A+
Sbjct: 746 KLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGRKEDAM 805

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            +   + ++   P    +  I + + ++G  EE
Sbjct: 806 DLFAAIPANGLVPSVVTYRLIAENLIEEGSLEE 838



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/440 (23%), Positives = 205/440 (46%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L  +  +G L++   L+++M      P+      +I    +   I++   +   M   G
Sbjct: 476 MLHGYGKKGALSEMHDLLNLMVANGISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQG 535

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TY  ++  LCK G++  A+   ++M   G  P+ + +N+++  +    K+++  
Sbjct: 536 LSPNVVTYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVE 595

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + + L +G  P ++ +  ++  +CK+  +  A  ++D M   G  PD+++YN+L++  
Sbjct: 596 ELFLEMLNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGH 655

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C   + D+AV +++ ++S G++PN ++YNTLLH     G  D    +   M     +P V
Sbjct: 656 CFASRMDEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGV 715

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN ++NGL + G    A   +  M+       I TY+ +L   CK    +EA ++   
Sbjct: 716 ETYNTILNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQS 775

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L        +IT+N +IDGL K G  E AM L+  +  NG+ P  +T+R +         
Sbjct: 776 LCSMDLQLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGS 835

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +EE   L   + K G    +     +I  L    ++  A   L  +    +  + +  S 
Sbjct: 836 LEELDCLFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSM 895

Query: 543 IVKKVADDGMTEEAYKLWQK 562
           ++   + +   + A  L +K
Sbjct: 896 LISLFSREEYQQHAKSLPEK 915



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 98/397 (24%), Positives = 191/397 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  + +  N ++  +  R  + +   +   M ++   P+      LI  L ++ R++ A 
Sbjct: 501 ISPNHRIFNTVICAYAKRAMIDEVMHIFIKMKQQGLSPNVVTYGTLIDALCKLGRVDDAV 560

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                M+  G  P+ + +N +V GLC   +      L  EM   G  PD++ +NT+L  +
Sbjct: 561 LQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEMLNQGIRPDIVFFNTVLCNL 620

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  +A       +  G  P +I+Y  LI+  C    +  A+++LD M   G  P+I
Sbjct: 621 CKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRMDEAVKLLDGMVSAGLKPNI 680

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V+YN+L++  CK G+ D+A  +   +L +G+ P   TYNT+L+ L   G +    ++   
Sbjct: 681 VSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTILNGLFRSGRFSEARELYVN 740

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M ++    ++ TY+I+++G CK    D A   F  + S + Q DI+T+N ++  L K G 
Sbjct: 741 MIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDLQLDIITFNIMIDGLFKGGR 800

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             +A+ L   +  +   P ++TY  + + L ++G +E+   L+  M ++G +P+      
Sbjct: 801 KEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDCLFSVMEKSGTAPNSHMLNA 860

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           LI       ++  A   L ++ ++   +  S   ++I
Sbjct: 861 LIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLI 897



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 184/376 (48%), Gaps = 13/376 (3%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFD---NGKFKQAIGFWKDQLR---KGCPPY 256
           +  A+ L DE+ +      V   N +L  +     +   K A+  +   LR       P 
Sbjct: 24  LHDALKLFDELLLHARPASVRALNQLLSVVSRAKCSSSSKLAVSRFNRMLRDCSNKVAPD 83

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-LVI 315
             TY+I+I   C+   +         +   G   D +  N L+   C   +  +A+ +++
Sbjct: 84  CCTYSIVIGCFCRIGRLELGFAAFGLILKTGWRVDDIVVNQLLKGLCDTKRVGEAMHVLL 143

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM---NEASHSPTVFTYNILINGL 372
             +   G     ++YNTLL  L  R   +   ++L +M    ++S SP V +YNI+ING 
Sbjct: 144 RQMPEVGCRLGVVSYNTLLKGLCDRRRAEEARELLHMMVDGQDSSCSPDVVSYNIVINGF 203

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
              G VD+A + F +M      PD+VTYNT++  LCK   ++ A  +   +      P  
Sbjct: 204 FNEGQVDKAYSLFLEM---GVSPDVVTYNTIIDGLCKAQEVDRAEDVFQQMVEKGVKPNN 260

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           +TYNT+IDGL K   ++ A  ++ +M++ G+ P ++T+ T+I G C+A  V+ A  + ++
Sbjct: 261 VTYNTIIDGLCKAQEVDMAEGVFQKMVDKGVKPSNVTYNTIIDGLCKAQAVDRAEGVFQQ 320

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +  RG K  +  Y  +I GLCK++ +D A  V + MI    KPD+  ++ I+  +     
Sbjct: 321 MIDRGVKPDHVTYNTIIDGLCKAQAIDKAEGVFQQMIDKGVKPDNLTYTIIIDGLCKAQS 380

Query: 553 TEEAYKLWQKLIEWKV 568
            + A  ++Q++I+  V
Sbjct: 381 VDRAEGVFQQMIDKGV 396



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 172/371 (46%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G++ DA    + M      P+     +L+ GL  +D+ EK  ++   M
Sbjct: 542 TYGTLIDALCKLGRVDDAVLQFNQMINEGVTPNNVVFNSLVYGLCTVDKWEKVEELFLEM 601

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD + +N ++  LCK G++  A  L+D M   G +PDVI+YNT++       + 
Sbjct: 602 LNQGIRPDIVFFNTVLCNLCKEGRVMEARRLIDSMVCMGLKPDVISYNTLIDGHCFASRM 661

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+      +  G  P +++Y  L+   CK   I  A  +  +M  +G +P + TYN++
Sbjct: 662 DEAVKLLDGMVSAGLKPNIVSYNTLLHGYCKAGRIDNAYCLFREMLRKGVTPGVETYNTI 721

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   + G++ +A  +  N++      +  TY+ +L       C+D   KI   +     
Sbjct: 722 LNGLFRSGRFSEARELYVNMIKSRKLWSICTYSIILDGFCKNNCFDEAFKIFQSLCSMDL 781

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              + T+NI+I+GL K G  + A++ F  + +    P +VTY  +   L +EG L E   
Sbjct: 782 QLDIITFNIMIDGLFKGGRKEDAMDLFAAIPANGLVPSVVTYRLIAENLIEEGSLEELDC 841

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L  ++  S  +P     N LI  L  +G + +A     ++ E   S +  T   LI  F 
Sbjct: 842 LFSVMEKSGTAPNSHMLNALIRKLLDRGEIPRAGAYLSKLDEKNFSLEASTTSMLISLFS 901

Query: 479 RADQVEEAVDL 489
           R +  + A  L
Sbjct: 902 REEYQQHAKSL 912


>gi|302142431|emb|CBI19634.3| unnamed protein product [Vitis vinifera]
          Length = 839

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 126/423 (29%), Positives = 218/423 (51%), Gaps = 1/423 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           IL+ +  +G   +A  + D M +  +IP    C +L+  L++      A  V Q M+  G
Sbjct: 128 ILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQMIRVG 187

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD    ++MV   CK G++  A   + +M   G EP+++TY++++      G  + A 
Sbjct: 188 IVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGDVEAAK 247

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC-SPDIVTYNSLVNF 301
           G  K    KG    ++TYT+LI+  CKQC +  A +VL  M  E    PD   Y  L++ 
Sbjct: 248 GVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDG 307

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+ GK DDAV +++ +L  G++ N    N+L++    RG     + ++  M + +  P 
Sbjct: 308 YCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPD 367

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++YN L++G C+ G    A N  ++M+ +  +P ++TYNT+L  LC+ G  ++ALQ+ H
Sbjct: 368 SYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWH 427

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           L+     +P  + Y+TL+DGL K    E A  L+  ++  G +   IT  T+I G C+  
Sbjct: 428 LMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMG 487

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ EA ++  ++   G       YR +I G CK+  V  A +V   M      P   +++
Sbjct: 488 KMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYN 547

Query: 542 TIV 544
           +++
Sbjct: 548 SLI 550



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 146/517 (28%), Positives = 230/517 (44%), Gaps = 67/517 (12%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE+    ++  +C  GK+ DA +L+D M R     +   C +LI G  +   I +A  V+
Sbjct: 297 DERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVI 356

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM--- 232
             MV     PD+ +YN ++ G C+ G    A  L D+M   G EP V+TYNT+L+ +   
Sbjct: 357 TRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRV 416

Query: 233 --FDNG------------------------------KFKQAIGFWKDQLRKGCPPYLITY 260
             FD+                                F+ A   WKD L +G     IT+
Sbjct: 417 GAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDILARGFTKSRITF 476

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
             +I  +CK   +  A E+ D M   GCSPD +TY +L++  CK      A  V   +  
Sbjct: 477 NTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNVGQAFKVKGAMER 536

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
             + P+   YN+L+  L        V  +L  M     +P + TY  LI+G CK G++D+
Sbjct: 537 EPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDK 596

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NG------------- 425
           A +S+ +M       +I+  +T++  L + G ++EA  L+  +  +G             
Sbjct: 597 AFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDI 656

Query: 426 -------------SSCSPCL----ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
                         SC   L    I YN  I GL K G ++ A   +  +   G  PD+ 
Sbjct: 657 RYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNF 716

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ TLI G+  A  V+EA  L  E+ +RG       Y  +I+GLCKS+ VD A ++   +
Sbjct: 717 TYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKL 776

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                 P+   ++T++      G  + A+KL  K+IE
Sbjct: 777 HQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIE 813



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 129/479 (26%), Positives = 228/479 (47%), Gaps = 33/479 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   +++ +C + K+ +A K++  M      +PD      LI G  R  +I+ A ++L  
Sbjct: 264 TYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDE 323

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G   +    N ++ G CKRG+I  A  ++  M     +PD  +YNT+L      G 
Sbjct: 324 MLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGH 383

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A       L++G  P ++TY  L++ +C+      A+++   M   G +PD V Y++
Sbjct: 384 TSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYST 443

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++   K   ++ A  +  ++L+RG   + IT+NT++  L   G     ++I D M +  
Sbjct: 444 LLDGLFKMENFEGASTLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLG 503

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP   TY  LI+G CK   V +A      M  +   P I  YN+++  L K   L E  
Sbjct: 504 CSPDGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVT 563

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            LL  +     +P ++TY  LIDG  K+G ++KA   Y +M ENG+S + I   T++ G 
Sbjct: 564 DLLTEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGL 623

Query: 478 CRADQVEEAVDLLKEIGKRG----------NKMRNSA----------------------Y 505
            R  +++EA  L++++   G          + +R +A                      Y
Sbjct: 624 YRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 683

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            + I GLCK+ KVD A +   ++    + PD+  + T++   +  G  +EA++L  +++
Sbjct: 684 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEML 742



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/488 (27%), Positives = 220/488 (45%), Gaps = 36/488 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N +L N    G+   A  +   M R   +PD      ++    +  ++++A+  ++ 
Sbjct: 158 RSCNSLLNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKK 217

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+ +TY+ ++ G    G + +A  +L  MS  G   +V+TY  +++      K
Sbjct: 218 MENLGVEPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCK 277

Query: 238 FKQAIGFWKD-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
             +A    +  Q      P    Y +LI+  C+   I  A+ +LD+M   G   ++   N
Sbjct: 278 MDEAEKVLRGMQEEAALVPDERAYGVLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICN 337

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL+N  CK+G+  +A  VI  ++   ++P+S +YNTLL      G       + D M + 
Sbjct: 338 SLINGYCKRGEIHEAEGVITRMVDWNLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQE 397

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              PTV TYN L+ GLC+ G  D A+  ++ M+ +   PD V Y+T+L  L K      A
Sbjct: 398 GIEPTVLTYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGA 457

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             L   +     +   IT+NT+I GL K G M +A  ++ +M + G SPD IT+RTLI G
Sbjct: 458 STLWKDILARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDG 517

Query: 477 FCRADQVEEA-----------------------------------VDLLKEIGKRGNKMR 501
           +C+A  V +A                                    DLL E+G RG    
Sbjct: 518 YCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPN 577

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y  +I G CK   +D A      M  +    +  + ST+V  +   G  +EA  L Q
Sbjct: 578 IVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQ 637

Query: 562 KLIEWKVF 569
           K+++   F
Sbjct: 638 KMVDHGFF 645



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/417 (27%), Positives = 197/417 (47%), Gaps = 3/417 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+  C  G   DA ++  +M +R   PD      L+ GL +++  E AS + + +
Sbjct: 405 TYNTLLKGLCRVGAFDDALQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDI 464

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G     IT+N M+ GLCK G++  A  + D+M   GC PD ITY T++         
Sbjct: 465 LARGFTKSRITFNTMISGLCKMGKMVEAEEIFDKMKDLGCSPDGITYRTLIDGYCKASNV 524

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA        R+   P +  Y  LI  + K   +    ++L +M I G +P+IVTY +L
Sbjct: 525 GQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLLTEMGIRGLTPNIVTYGAL 584

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G  D A      +   G+  N I  +T++  L   G  D  + ++  M +   
Sbjct: 585 IDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRLGRIDEANLLMQKMVDHGF 644

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    +   +    +Y  + +  +S ++       P+ + YN  +  LCK G +++A +
Sbjct: 645 FPD---HECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVYNIAIAGLCKTGKVDDARR 701

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
              +L+     P   TY TLI G +  G +++A  L  +M+  G+ P+ +T+  LI G C
Sbjct: 702 FFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLRRGLVPNIVTYNALINGLC 761

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           +++ V+ A  L  ++ ++G       Y  +I G CK   +D A ++ + MI     P
Sbjct: 762 KSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDAAFKLKDKMIEEGISP 818



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 107/403 (26%), Positives = 190/403 (47%), Gaps = 11/403 (2%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCK---RGQI--RSAIALLDEMSVSGCEPDV 222
           ++   K++ I+       +T  Y   +  LCK   RG +     + +  E + S   P V
Sbjct: 68  VKSYCKLVHILSRGRMYDETRAYLNQLVDLCKFKDRGNVIWDELVGVYREFAFS---PTV 124

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
             ++ IL+   + G  K A+  + +  + G  P L +   L+  + K      A  V   
Sbjct: 125 --FDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSLLNNLVKNGETHTAHYVYQQ 182

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G  PD+   + +VN  CK GK D+A   +  + + G+EPN +TY++L++   S G 
Sbjct: 183 MIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGVEPNIVTYHSLINGYVSLGD 242

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ-PDIVTYN 401
            +A   +L  M+E   S  V TY +LI G CK   +D A      M  +    PD   Y 
Sbjct: 243 VEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEKVLRGMQEEAALVPDERAYG 302

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            ++   C+ G +++A++LL  +        L   N+LI+G  K+G + +A  +  +M++ 
Sbjct: 303 VLIDGYCRTGKIDDAVRLLDEMLRLGLKTNLFICNSLINGYCKRGEIHEAEGVITRMVDW 362

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
            + PD  ++ TL+ G+CR     EA +L  ++ + G +     Y  ++ GLC+    D A
Sbjct: 363 NLKPDSYSYNTLLDGYCREGHTSEAFNLCDKMLQEGIEPTVLTYNTLLKGLCRVGAFDDA 422

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +Q+  LM+     PD+  +ST++  +      E A  LW+ ++
Sbjct: 423 LQIWHLMMKRGVAPDEVGYSTLLDGLFKMENFEGASTLWKDIL 465



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 88/317 (27%), Positives = 150/317 (47%), Gaps = 3/317 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  +C    +  A K+   M R    P      +LI GL +  R+ + + +L
Sbjct: 507 DGITYRTLIDGYCKASNVGQAFKVKGAMEREPISPSIEMYNSLISGLFKSRRLVEVTDLL 566

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G  P+ +TY  ++ G CK G +  A +   EM+ +G   ++I  +T++  ++  
Sbjct: 567 TEMGIRGLTPNIVTYGALIDGWCKEGMLDKAFSSYFEMTENGLSANIIICSTMVSGLYRL 626

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A    +  +  G  P    +   ++   +   I +  + LD+       P+ + Y
Sbjct: 627 GRIDEANLLMQKMVDHGFFP---DHECFLKSDIRYAAIQKIADSLDESCKTFLLPNNIVY 683

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N  +   CK GK DDA    + L  +G  P++ TY TL+H   + G  D   ++ D M  
Sbjct: 684 NIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYCTLIHGYSAAGNVDEAFRLRDEMLR 743

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN LINGLCK   VDRA   F+++  K   P++VTYNT++   CK G ++ 
Sbjct: 744 RGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYCKIGNMDA 803

Query: 416 ALQLLHLLNGSSCSPCL 432
           A +L   +     SP +
Sbjct: 804 AFKLKDKMIEEGISPSI 820



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 114/262 (43%), Gaps = 19/262 (7%)

Query: 1   MGYTVVPPNSIIELHCLPNLQWCSRQVSLQHGVVNNHRTQFYSQLRDLGAGRNVSLKCRG 60
           MG   + PN I+    L +  WC      + G+++   + ++ ++ + G   N+ +    
Sbjct: 569 MGIRGLTPN-IVTYGALID-GWC------KEGMLDKAFSSYF-EMTENGLSANIIICSTM 619

Query: 61  LPGNVCIDRVNEVDQ------DEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVE 114
           + G   + R++E +       D      H   +   +R   I K +   SL  S   F+ 
Sbjct: 620 VSGLYRLGRIDEANLLMQKMVDHGFFPDHECFLKSDIRYAAIQKIAD--SLDESCKTFLL 677

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASK 173
            +    N  +   C  GK+ DA +   +++ +  +PD F +C  LI G      +++A +
Sbjct: 678 PNNIVYNIAIAGLCKTGKVDDARRFFSMLSLKGFVPDNFTYC-TLIHGYSAAGNVDEAFR 736

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M+  G VP+ +TYN ++ GLCK   +  A  L  ++   G  P+V+TYNT++    
Sbjct: 737 LRDEMLRRGLVPNIVTYNALINGLCKSENVDRAQRLFHKLHQKGLFPNVVTYNTLIDGYC 796

Query: 234 DNGKFKQAIGFWKDQLRKGCPP 255
             G    A       + +G  P
Sbjct: 797 KIGNMDAAFKLKDKMIEEGISP 818



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 55/247 (22%), Positives = 103/247 (41%), Gaps = 20/247 (8%)

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +   PN  +Y  L+H L     +D     L               N L++ LCK+   DR
Sbjct: 62  QNFRPNVKSYCKLVHILSRGRMYDETRAYL---------------NQLVD-LCKFK--DR 103

Query: 381 AINSFNQMVS--KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
               ++++V   +        ++ +L    ++G+   AL +   +      P L + N+L
Sbjct: 104 GNVIWDELVGVYREFAFSPTVFDMILKVYVEKGLTKNALYVFDNMGKCGRIPSLRSCNSL 163

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           ++ L K G    A  +Y QM+  GI PD      ++  FC+  +V+EA   +K++   G 
Sbjct: 164 LNNLVKNGETHTAHYVYQQMIRVGIVPDVFMVSIMVNAFCKDGKVDEAAGFVKKMENLGV 223

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +     Y  +I+G      V+ A  VL+ M       +   ++ ++K        +EA K
Sbjct: 224 EPNIVTYHSLINGYVSLGDVEAAKGVLKFMSEKGVSRNVVTYTLLIKGYCKQCKMDEAEK 283

Query: 559 LWQKLIE 565
           + + + E
Sbjct: 284 VLRGMQE 290


>gi|449462136|ref|XP_004148797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  223 bits (567), Expect = 2e-55,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 221/435 (50%), Gaps = 6/435 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++ + C  GK+ DA +L      +  +P ++    LI G+ +  RIE A K+L
Sbjct: 213 DAVTYTTMVSSLCKAGKIDDARELAGRF--KPSVPVYN---ALIDGMCKEGRIEVAIKLL 267

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ +G  P+ ++Y+ ++  LC  G +  A AL  +M + GC+ ++ T+  +++  F  
Sbjct: 268 GEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMR 327

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A+  WK  ++ GC P ++ Y  LI  +C    +  A++V D M   GC P++ TY
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY 387

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L++   K G    A    N ++S G  PN +TY  ++  L     +D  + +++ M  
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL 447

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P   T+N  I GLC  G V+ A+    +M    C P+I TYN +L AL +     E
Sbjct: 448 EGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE 507

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   +   +  P L+TYNT++ G ++ G M +A+ L+G+ +  G +PD IT+ T+I 
Sbjct: 508 AFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIH 567

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            +C+  +V+ A  L++ +        +   Y  +I G C    ++ A+  L+  I+    
Sbjct: 568 AYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGIC 627

Query: 535 PDDTVFSTIVKKVAD 549
           P+   ++ +V+   D
Sbjct: 628 PNFATWNALVRCFFD 642



 Score =  214 bits (546), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 219/449 (48%), Gaps = 8/449 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L    S  K    + L   M +   IP+      L++ L + DR++ A K+   M  
Sbjct: 148 NHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSN 207

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TY  MV  LCK G+I  A  L         +P V  YN ++  M   G+ + 
Sbjct: 208 KGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEV 262

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI    + +  G  P +++Y+ +I  +C    +  A  +   M + GC  +I T+  L+ 
Sbjct: 263 AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK 322

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +GK  +A+ +   ++  G EPN + YNTL+H L S G  +   ++ D M  +   P
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY+ILI+G  K G +  A  ++N+M+S  C+P++VTY  ++  LCK  M ++A  L+
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C+P  +T+NT I GL   G +E AM L  +M  +G  P+  T+  L+    R 
Sbjct: 443 EKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           ++ EEA  L +EI  R  +     Y  V++G  ++  +  A+Q+    +     PD   +
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITY 562

Query: 541 STIVKKVADDGMTEEAYKLWQK---LIEW 566
           +T++      G  + A +L ++   + EW
Sbjct: 563 NTMIHAYCKQGKVKIAAQLVERVSSMKEW 591



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 204/413 (49%), Gaps = 7/413 (1%)

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D   CI  I G  R+   E+A K+   +   G  P    YN ++  L    + +    L 
Sbjct: 110 DLFICI--INGYKRVGSAEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLY 167

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
             M   G  P+V TYN +L+ +  N +   A   + +   KGCPP  +TYT ++  +CK 
Sbjct: 168 TNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKA 227

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             I  A E+          P +  YN+L++  CK+G+ + A+ ++  ++  G++PN ++Y
Sbjct: 228 GKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSY 282

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           + +++SL   G  +    +   M        + T+  LI G    G +  A++ +  M+ 
Sbjct: 283 SCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQ 342

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
             C+P++V YNT++  LC  G L EALQ+   +  S C P + TY+ LIDG AK G +  
Sbjct: 343 DGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVG 402

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A   + +M+ +G  P+ +T+  ++   C+    ++A  L++++   G       +   I 
Sbjct: 403 ASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIK 462

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           GLC + +V+ A+++LE M      P+ T ++ ++  +      EEA+ L+Q++
Sbjct: 463 GLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEEAFGLFQEI 515



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 221/481 (45%), Gaps = 14/481 (2%)

Query: 92  RGLTITKKSHDPSLPS--SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI 149
            G ++  K   P +P   +  P +   +    ++LQ      +L     L  ++   + I
Sbjct: 5   EGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAI 64

Query: 150 PD---FHFCINLIRGLI-RIDR---IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
            +   F    +  R +I R+ R   ++    +LQ M M G       +  ++ G  + G 
Sbjct: 65  ANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGS 124

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
              A+ +   +   GC+P V  YN +L  +    KF+     + +  + G  P + TY I
Sbjct: 125 AEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNI 184

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L++ +CK   +  A ++  +M+ +GC PD VTY ++V+  CK GK DDA       L+  
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA-----RELAGR 239

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +P+   YN L+  +   G  +   K+L  M +    P V +Y+ +IN LC  G V+ A 
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             F QM  + C  +I T+  ++      G L EAL L  L+    C P ++ YNTLI GL
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
              G +E+A+ +  QM  +G  P+  T+  LI GF ++  +  A +    +   G +   
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  ++  LCK+   D A  ++E M      P+   F+T +K +  +G  E A KL ++
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTMTFNTFIKGLCGNGRVEWAMKLLER 479

Query: 563 L 563
           +
Sbjct: 480 M 480



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N++L       K  +A  L   +  RN  P+      ++ G  R   + +A ++    
Sbjct: 491 TYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKA 550

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDNGK 237
           ++ G  PD+ITYN M+   CK+G+++ A  L++ +S +    PD+ITY +++    +   
Sbjct: 551 LVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMN 610

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
            ++A+ F    + +G  P   T+  L+       G    I +LDD+  +G
Sbjct: 611 IEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|449511869|ref|XP_004164076.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Cucumis sativus]
          Length = 660

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 221/435 (50%), Gaps = 6/435 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++ + C  GK+ DA +L      +  +P ++    LI G+ +  RIE A K+L
Sbjct: 213 DAVTYTTMVSSLCKAGKIDDARELAGRF--KPSVPVYN---ALIDGMCKEGRIEVAIKLL 267

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ +G  P+ ++Y+ ++  LC  G +  A AL  +M + GC+ ++ T+  +++  F  
Sbjct: 268 GEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIKGCFMR 327

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A+  WK  ++ GC P ++ Y  LI  +C    +  A++V D M   GC P++ TY
Sbjct: 328 GKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLPNVTTY 387

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L++   K G    A    N ++S G  PN +TY  ++  L     +D  + +++ M  
Sbjct: 388 SILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLVEKMTL 447

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P   T+N  I GLC  G V+ A+    +M    C P+I TYN +L AL +     E
Sbjct: 448 EGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRMNKYEE 507

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   +   +  P L+TYNT++ G ++ G M +A+ L+G+ +  G +PD IT+ T+I 
Sbjct: 508 AFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITYNTMIH 567

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            +C+  +V+ A  L++ +        +   Y  +I G C    ++ A+  L+  I+    
Sbjct: 568 AYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMNIEEAMAFLDKAINQGIC 627

Query: 535 PDDTVFSTIVKKVAD 549
           P+   ++ +V+   D
Sbjct: 628 PNFATWNALVRCFFD 642



 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 219/449 (48%), Gaps = 8/449 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L    S  K    + L   M +   IP+      L++ L + DR++ A K+   M  
Sbjct: 148 NHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNILLKALCKNDRVDAAHKLFVEMSN 207

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TY  MV  LCK G+I  A  L         +P V  YN ++  M   G+ + 
Sbjct: 208 KGCPPDAVTYTTMVSSLCKAGKIDDARELAGRF-----KPSVPVYNALIDGMCKEGRIEV 262

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI    + +  G  P +++Y+ +I  +C    +  A  +   M + GC  +I T+  L+ 
Sbjct: 263 AIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAFALFAQMFLRGCDANIHTFTPLIK 322

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +GK  +A+ +   ++  G EPN + YNTL+H L S G  +   ++ D M  +   P
Sbjct: 323 GCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGLCSNGSLEEALQVCDQMQRSGCLP 382

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY+ILI+G  K G +  A  ++N+M+S  C+P++VTY  ++  LCK  M ++A  L+
Sbjct: 383 NVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNVVTYTCMVDVLCKNSMFDQANSLV 442

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C+P  IT+NT I GL   G +E AM L  +M  +G  P+  T+  L+    R 
Sbjct: 443 EKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLERMQGHGCLPNITTYNELLDALFRM 502

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           ++ EEA  L +EI  R  +     Y  V++G  ++  +  A+Q+    +     PD   +
Sbjct: 503 NKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKALVRGTAPDSITY 562

Query: 541 STIVKKVADDGMTEEAYKLWQK---LIEW 566
           +T++      G  + A +L ++   + EW
Sbjct: 563 NTMIHAYCKQGKVKIAAQLVERVSSMKEW 591



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 129/481 (26%), Positives = 221/481 (45%), Gaps = 14/481 (2%)

Query: 92  RGLTITKKSHDPSLPS--SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI 149
            G ++  K   P +P   +  P +   +    ++LQ      +L     L  ++   + I
Sbjct: 5   EGRSLLMKIQKPLIPFVLNSNPIINPRDPNKQQLLQESDVLKRLKTDRNLSSVLGFFSAI 64

Query: 150 PD---FHFCINLIRGLI-RIDR---IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
            +   F    +  R +I R+ R   ++    +LQ M M G       +  ++ G  + G 
Sbjct: 65  ANSNAFQHTASTYRVMIERLGRECEMDMVQYILQQMKMDGINCCEDLFICIINGYKRVGS 124

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
              A+ +   +   GC+P V  YN +L  +    KF+     + +  + G  P + TY I
Sbjct: 125 AEQALKMFYRIGEFGCKPTVRIYNHLLDALLSENKFQMINPLYTNMKKDGLIPNVFTYNI 184

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L++ +CK   +  A ++  +M+ +GC PD VTY ++V+  CK GK DDA       L+  
Sbjct: 185 LLKALCKNDRVDAAHKLFVEMSNKGCPPDAVTYTTMVSSLCKAGKIDDA-----RELAGR 239

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +P+   YN L+  +   G  +   K+L  M +    P V +Y+ +IN LC  G V+ A 
Sbjct: 240 FKPSVPVYNALIDGMCKEGRIEVAIKLLGEMMDNGVDPNVVSYSCIINSLCVSGNVELAF 299

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             F QM  + C  +I T+  ++      G L EAL L  L+    C P ++ YNTLI GL
Sbjct: 300 ALFAQMFLRGCDANIHTFTPLIKGCFMRGKLYEALDLWKLMIQDGCEPNVVAYNTLIHGL 359

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
              G +E+A+ +  QM  +G  P+  T+  LI GF ++  +  A +    +   G +   
Sbjct: 360 CSNGSLEEALQVCDQMQRSGCLPNVTTYSILIDGFAKSGDLVGASETWNRMISHGCRPNV 419

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  ++  LCK+   D A  ++E M      P+   F+T +K +  +G  E A KL ++
Sbjct: 420 VTYTCMVDVLCKNSMFDQANSLVEKMTLEGCTPNTITFNTFIKGLCGNGRVEWAMKLLER 479

Query: 563 L 563
           +
Sbjct: 480 M 480



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 43/170 (25%), Positives = 81/170 (47%), Gaps = 1/170 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N++L       K  +A  L   +  RN  P+      ++ G  R   + +A ++    
Sbjct: 491 TYNELLDALFRMNKYEEAFGLFQEIEARNLQPNLVTYNTVLYGFSRAGMMGEALQLFGKA 550

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDNGK 237
           ++ G  PD+ITYN M+   CK+G+++ A  L++ +S +    PD+ITY +++    +   
Sbjct: 551 LVRGTAPDSITYNTMIHAYCKQGKVKIAAQLVERVSSMKEWHPDIITYTSLIWGACNWMN 610

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
            ++A+ F    + +G  P   T+  L+       G    I +LDD+  +G
Sbjct: 611 IEEAMAFLDKAINQGICPNFATWNALVRCFFDSLGHMGPIHILDDILRKG 660


>gi|224123236|ref|XP_002330266.1| predicted protein [Populus trichocarpa]
 gi|222871301|gb|EEF08432.1| predicted protein [Populus trichocarpa]
          Length = 590

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 227/450 (50%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C   +  DA +  D+M  +  IP  H C +++   ++ +R EKA  +   M         
Sbjct: 132 CELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSV 191

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +T+N+M+  LCK G+++ A   +  M   G +P+V+TYNTI+      G+ + A   +  
Sbjct: 192 VTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDL 251

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
              +G  P   TY   I  +CK+  +  A  +L+ M   G  P  VTYN+L++  C +G 
Sbjct: 252 MKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGN 311

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            + A    + ++  G+ P   TYN L+H+L      D  D I+  M+E    P   TYNI
Sbjct: 312 LEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNI 371

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING C+ G V +A    ++M+SK  QP  VTY +++  L K G + +A  L   +    
Sbjct: 372 LINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKG 431

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P LI +N LIDG    G M++A  +  +M +  + PD++T  TL+ G CR  +VE A 
Sbjct: 432 IFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAAR 491

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +L++E+  RG K  + +Y  +I G  K   +  A +V + M+S  + P    ++ +++ +
Sbjct: 492 ELIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGL 551

Query: 548 ADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
             +   + A +L +++I   +     T L+
Sbjct: 552 CKNEEGDHAEQLLKEMISKGITPNDNTYLS 581



 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 119/394 (30%), Positives = 202/394 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GKL  A + I +M      P+      +I G     R+E A  +  +M
Sbjct: 193 TFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLM 252

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD+ TY   + G+CK G++  A  +L++M   G  P  +TYNT++    + G  
Sbjct: 253 KCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNL 312

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A  +    +R+G  P + TY +LI  +   C +  A  ++ +M+ +G  PD VTYN L
Sbjct: 313 EMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNIL 372

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C+ G    A  + + ++S+G++P  +TY +L++ L  RG     D + + +     
Sbjct: 373 INGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGI 432

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +  +N LI+G C  G +DRA     +M      PD VT+NT++   C+EG +  A +
Sbjct: 433 FPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARE 492

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +      P  I+YNTLI G +K+G M+ A  +  +M+  G +P  +T+  LI G C
Sbjct: 493 LIEEMKSRGIKPDHISYNTLISGYSKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLC 552

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           + ++ + A  LLKE+  +G    ++ Y  +I G+
Sbjct: 553 KNEEGDHAEQLLKEMISKGITPNDNTYLSLIEGI 586



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 125/432 (28%), Positives = 215/432 (49%), Gaps = 6/432 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMAR---RNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           N +L  F    +   A  L   M R   ++ +  F+  IN+   L +  +++KA + + +
Sbjct: 160 NDMLSLFLKSNRTEKAWVLYAEMFRMRIKSSVVTFNIMINV---LCKEGKLKKAKEFIGL 216

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+ +TYN ++ G C RG++  A  + D M   G +PD  TY + +  M   GK
Sbjct: 217 MEALGIKPNVVTYNTIIHGYCSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGK 276

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A G  +     G  P  +TY  LI+  C +  +  A +  D M  EG  P + TYN 
Sbjct: 277 LEEASGMLEKMKEIGLRPTAVTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNM 336

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++      K D+A  +I  +  +G+ P+S+TYN L++     G       + D M    
Sbjct: 337 LIHALFLDCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKG 396

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             PT  TY  LI  L K G + +A + F ++V K   PD++ +N ++   C  G ++ A 
Sbjct: 397 IQPTRVTYTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAF 456

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L  ++     P  +T+NTL+ G  ++G +E A  L  +M   GI PD I++ TLI G+
Sbjct: 457 AMLKEMDQMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGY 516

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +   +++A  +  E+   G       Y  +I GLCK+++ D A Q+L+ MIS    P+D
Sbjct: 517 SKRGDMKDAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPND 576

Query: 538 TVFSTIVKKVAD 549
             + ++++ + +
Sbjct: 577 NTYLSLIEGIGN 588



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 200/381 (52%)

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
           G+   + Y++++   C+  +   A    D M   G  P V   N +L     + + ++A 
Sbjct: 117 GIKTYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAW 176

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +  R      ++T+ I+I  +CK+  + +A E +  M   G  P++VTYN++++  
Sbjct: 177 VLYAEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGY 236

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +G+ + A ++ + +  RG++P+S TY + +  +   G  +    +L+ M E    PT 
Sbjct: 237 CSRGRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTA 296

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN LI+G C  G ++ A +  ++MV +   P + TYN ++ AL  +  ++EA  ++  
Sbjct: 297 VTYNTLIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKE 356

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++     P  +TYN LI+G  + G ++KA  L+ +M+  GI P  +T+ +LI+   +  +
Sbjct: 357 MSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGR 416

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +++A DL ++I ++G       +  +I G C +  +D A  +L+ M   +  PD+  F+T
Sbjct: 417 MKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMDQMKVVPDEVTFNT 476

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           +++    +G  E A +L +++
Sbjct: 477 LMQGRCREGKVEAARELIEEM 497



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 82/312 (26%), Positives = 153/312 (49%)

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           + Y +LI   C+      A E  D M  +G  P +   N +++   K  + + A ++   
Sbjct: 122 VLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLYAE 181

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +    ++ + +T+N +++ L   G      + + +M      P V TYN +I+G C  G 
Sbjct: 182 MFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSRGR 241

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           V+ A   F+ M  +  +PD  TY + +  +CKEG L EA  +L  +      P  +TYNT
Sbjct: 242 VEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTYNT 301

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LIDG   KG +E A     +M+  G+ P   T+  LI       +++EA  ++KE+ ++G
Sbjct: 302 LIDGYCNKGNLEMAFDYRDKMVREGLMPTVSTYNMLIHALFLDCKMDEADGIIKEMSEKG 361

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
               +  Y ++I+G C+   V  A  + + MIS   +P    +++++  ++  G  ++A 
Sbjct: 362 LVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVTYTSLIYVLSKRGRMKQAD 421

Query: 558 KLWQKLIEWKVF 569
            L++K++   +F
Sbjct: 422 DLFEKIVRKGIF 433



 Score =  110 bits (276), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 71/245 (28%), Positives = 120/245 (48%), Gaps = 7/245 (2%)

Query: 102 DPSLPSSDGPFVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHF 154
           D  +  +DG   E  EK       T N ++  +C  G +  A  L D M  +   P    
Sbjct: 344 DCKMDEADGIIKEMSEKGLVPDSVTYNILINGYCRCGNVKKAFTLHDEMISKGIQPTRVT 403

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
             +LI  L +  R+++A  + + +V  G  PD I +N ++ G C  G +  A A+L EM 
Sbjct: 404 YTSLIYVLSKRGRMKQADDLFEKIVRKGIFPDLIMFNALIDGHCANGNMDRAFAMLKEMD 463

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
                PD +T+NT+++     GK + A    ++   +G  P  I+Y  LI    K+  + 
Sbjct: 464 QMKVVPDEVTFNTLMQGRCREGKVEAARELIEEMKSRGIKPDHISYNTLISGYSKRGDMK 523

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A  V D+M   G +P ++TYN+L+   CK  + D A  ++  ++S+G+ PN  TY +L+
Sbjct: 524 DAFRVRDEMLSIGFNPTLLTYNALIQGLCKNEEGDHAEQLLKEMISKGITPNDNTYLSLI 583

Query: 335 HSLGS 339
             +G+
Sbjct: 584 EGIGN 588



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 56/204 (27%), Positives = 94/204 (46%)

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           T   Y++LI   C+    D A   F+ M  K   P +   N +L    K     +A  L 
Sbjct: 120 TYVLYDLLIRACCELKRGDDAFECFDMMKGKGVIPHVHACNDMLSLFLKSNRTEKAWVLY 179

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +        ++T+N +I+ L K+G ++KA    G M   GI P+ +T+ T+I G+C  
Sbjct: 180 AEMFRMRIKSSVVTFNIMINVLCKEGKLKKAKEFIGLMEALGIKPNVVTYNTIIHGYCSR 239

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +VE A  +   +  RG K  +  Y   I G+CK  K++ A  +LE M     +P    +
Sbjct: 240 GRVEGARMIFDLMKCRGVKPDSYTYGSFISGMCKEGKLEEASGMLEKMKEIGLRPTAVTY 299

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           +T++    + G  E A+    K++
Sbjct: 300 NTLIDGYCNKGNLEMAFDYRDKMV 323


>gi|115458970|ref|NP_001053085.1| Os04g0477200 [Oryza sativa Japonica Group]
 gi|113564656|dbj|BAF14999.1| Os04g0477200, partial [Oryza sativa Japonica Group]
          Length = 528

 Score =  223 bits (567), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 217/408 (53%), Gaps = 16/408 (3%)

Query: 83  HVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDI 142
           H+ +  K  R L + ++   P            +  T N ++  FCSRG++  A  ++  
Sbjct: 123 HLCSAGKPARALELLRQMPRP------------NAVTYNTVIAGFCSRGRVQAALDIMRE 170

Query: 143 MARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKR 200
           M  R  I P+ +    +I G  ++ R+++A KV   M+  G V P+ + YN ++GG C +
Sbjct: 171 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 230

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G++ +A+   D M   G    V TYN ++  +F +G+  +A    ++   KG  P + TY
Sbjct: 231 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 290

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            ILI   CK+  + +A+E+ ++M+  G    +VTY +L+    K+G+  +   + +  + 
Sbjct: 291 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 350

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           RG+ P+ + YN L++S  + G  D   +I+  M +   +P   TYN L+ GLC  G VD 
Sbjct: 351 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 410

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A    ++M  +  QPD+VTYNT++     +G + +AL++ + +     +P L+TYN LI 
Sbjct: 411 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 470

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           GL K G  + A  +  +M+ENGI+PDD T+ +LI G    D  E A+D
Sbjct: 471 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED--ERAID 516



 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 206/396 (52%), Gaps = 6/396 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L++ CS GK   A +L+  M R N +        +I G     R++ A  +++ M
Sbjct: 116 TFNIMLRHLCSAGKPARALELLRQMPRPNAVT----YNTVIAGFCSRGRVQAALDIMREM 171

Query: 179 VMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNG 236
              GG+ P+  TY  ++ G CK G++  A+ + DEM   G  +P+ + YN ++    D G
Sbjct: 172 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 231

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K   A+ +    + +G    + TY +L+  +        A E++++M  +G +PD+ TYN
Sbjct: 232 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 291

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L+N  CK+G    A+ +  N+  RG+    +TY  L+++L  +G     DK+ D     
Sbjct: 292 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 351

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P +  YN LIN     G +DRA     +M  K   PD VTYNT++  LC  G ++EA
Sbjct: 352 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 411

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +L+  +      P L+TYNTLI G + KG ++ A+ +  +MM  G +P  +T+  LI G
Sbjct: 412 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 471

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            C+  Q ++A +++KE+ + G    +S Y  +I GL
Sbjct: 472 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 507



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 208/393 (52%), Gaps = 6/393 (1%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T+N+M+  LC  G+   A+ LL +M      P+ +TYNT++      G+ + A+   +
Sbjct: 114 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 169

Query: 247 D-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCK 304
           + + R G  P   TY  +I   CK   +  A++V D+M  +G   P+ V YN+L+   C 
Sbjct: 170 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 229

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           QGK D A+L  + ++ RG+     TYN L+H+L   G      ++++ M     +P VFT
Sbjct: 230 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 289

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YNILING CK G V +A+  F  M  +  +  +VTY  ++ AL K+G + E  +L     
Sbjct: 290 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 349

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P L+ YN LI+  +  G +++A  + G+M +  I+PDD+T+ TL+ G C   +V+
Sbjct: 350 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 409

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  L+ E+ +RG +     Y  +I G      V  A+++   M++  + P    ++ ++
Sbjct: 410 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 469

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           + +  +G  ++A  + ++++E  +    +T ++
Sbjct: 470 QGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 502


>gi|359479583|ref|XP_002275680.2| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Vitis vinifera]
 gi|297735515|emb|CBI17955.3| unnamed protein product [Vitis vinifera]
          Length = 627

 Score =  222 bits (566), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 137/490 (27%), Positives = 238/490 (48%), Gaps = 45/490 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C+  K+     ++  M RR   P+     +L++GL    RI +A+ +L
Sbjct: 126 DFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLL 185

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM---------------------- 213
           + MV  G  P+ +TY  ++ GLC  G    A+ L +EM                      
Sbjct: 186 RKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTII 245

Query: 214 -------------------SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
                                 G  PDV+ Y++I+  M   G+++ A G + + + +G  
Sbjct: 246 DSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVH 305

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P ++T+ +LI+ +CK   +  A  +L  M   G SPD  TYN+L++  C +G+ DDA  +
Sbjct: 306 PNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDL 365

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
             ++ S+G+E ++++YN L++     G      K+   M      PTV TYN L+ GL +
Sbjct: 366 FVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFR 425

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G V  A N F +M   +  P+  TYN +L  LCK   L+EA++L H L      P +  
Sbjct: 426 EGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQI 485

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           +N LIDGL K   +E A  L+ ++   G+ P+ IT+  +I G C++ Q+E A DL   + 
Sbjct: 486 FNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGME 545

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           ++G       +  ++ G C++ ++   +++L+ M    + PD +  S +V  ++ D    
Sbjct: 546 EKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKD---- 601

Query: 555 EAYKLWQKLI 564
           E Y+ +  L+
Sbjct: 602 EKYREYLHLL 611



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/451 (28%), Positives = 227/451 (50%), Gaps = 6/451 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L       +  D   L   M+     PDF     LI     +++++    VL  M+ 
Sbjct: 96  NTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLR 155

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+T+T+  +V GLC   +I  A  LL +M   G  P+V+TY T+L  +   G    
Sbjct: 156 RGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTML 215

Query: 241 AIGFWKDQLRKG------CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           A+   ++ L           P L+ Y  +I+ +CK   I +  E+  +M   G SPD+V 
Sbjct: 216 AVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVA 275

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+S+++  C  G+++ A  + N ++  G+ PN +T+N L+ +L   G  +  + +L +M 
Sbjct: 276 YSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMI 335

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +   SP  FTYN LI+G C  G +D A + F  M SK  + D V+YN ++   CK G + 
Sbjct: 336 QRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLINGYCKSGRMV 395

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +L   +      P +ITYNTL+ GL ++G +  A  L+G+M  + ++P+  T+  L+
Sbjct: 396 EAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLTPESCTYNILL 455

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+ + + EA++L   +     +     +  +I GLCK++K+++A ++   +     +
Sbjct: 456 DGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIARELFNRLSHEGLE 515

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           P+   ++ ++  +   G  E A  L+  + E
Sbjct: 516 PNVITYTVMIHGLCKSGQLENAKDLFLGMEE 546



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 205/435 (47%), Gaps = 41/435 (9%)

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A  V   ++     P   ++N ++G + K  +    I+L   MS+ G  PD IT N ++
Sbjct: 75  EAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDVISLYKRMSLIGLAPDFITLNILI 134

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
               +  K    +    + LR+G  P  +T+T L++ +C    I+ A  +L  M   G  
Sbjct: 135 NCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKGLCLGSRISEATGLLRKMVRMGYR 194

Query: 290 PDIVTYNSLVNFSCKQG------KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
           P++VTY +L+N  C  G      K  + +L  N      ++PN + Y T++ SL   G  
Sbjct: 195 PNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFGVTIKPNLVCYCTIIDSLCKDGLI 254

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           D   ++   M     SP V  Y+ +I+G+C  G  + A   FN+MV +   P++VT+N +
Sbjct: 255 DKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVL 314

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + ALCK G + EA  LL L+     SP   TYNTLIDG   +G ++ A  L+  M   GI
Sbjct: 315 IDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGI 374

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIG------------------KRGNKMRNS-- 503
             D +++  LI G+C++ ++ EA  L +E+                    R  K+R++  
Sbjct: 375 ETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWN 434

Query: 504 ---------------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
                           Y +++ GLCK+  +  A+++   + +  ++P   +F+ ++  + 
Sbjct: 435 LFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLC 494

Query: 549 DDGMTEEAYKLWQKL 563
                E A +L+ +L
Sbjct: 495 KARKIEIARELFNRL 509



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 105/379 (27%), Positives = 176/379 (46%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+ + C  G +    +L   M  R   PD     ++I G+    R E A  +   MV  G
Sbjct: 244 IIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEG 303

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +T+N+++  LCK G++  A  LL  M   G  PD  TYNT++      G+   A 
Sbjct: 304 VHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDAR 363

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +     KG     ++Y +LI   CK   +  A ++  +M  +   P ++TYN+L+   
Sbjct: 364 DLFVSMESKGIETDAVSYNVLINGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGL 423

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            ++GK  DA  +   +    + P S TYN LL  L          ++   +      P++
Sbjct: 424 FREGKVRDAWNLFGEMKVHDLTPESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSI 483

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             +N LI+GLCK   ++ A   FN++  +  +P+++TY  ++  LCK G L  A  L   
Sbjct: 484 QIFNCLIDGLCKARKIEIARELFNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLG 543

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +    C+P L+T+NTL+ G  +   M+K + L  +M E   SPD  T   ++    + ++
Sbjct: 544 MEEKGCAPNLVTFNTLMRGFCQNDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSKDEK 603

Query: 483 VEEAVDLLKEIGKRGNKMR 501
             E + LL     +G   R
Sbjct: 604 YREYLHLLPTFPAQGQTGR 622



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 87/335 (25%), Positives = 165/335 (49%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D    + I+   C  G+   A  L + M      P+      LI  L +  ++E
Sbjct: 266 GRGISPDVVAYSSIIHGMCHTGRWEGAKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKME 325

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A+ +L++M+  G  PDT TYN ++ G C  G+I  A  L   M   G E D ++YN ++
Sbjct: 326 EANHLLKLMIQRGESPDTFTYNTLIDGFCLEGRIDDARDLFVSMESKGIETDAVSYNVLI 385

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                +G+  +A   +++ + K   P +ITY  L+  + ++  +  A  +  +M +   +
Sbjct: 386 NGYCKSGRMVEAKKLYREMMCKEIMPTVITYNTLLTGLFREGKVRDAWNLFGEMKVHDLT 445

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P+  TYN L++  CK     +A+ + + L +   +P+   +N L+  L      +   ++
Sbjct: 446 PESCTYNILLDGLCKNNHLSEAMELFHYLENHDFQPSIQIFNCLIDGLCKARKIEIAREL 505

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            + ++     P V TY ++I+GLCK G ++ A + F  M  K C P++VT+NT++   C+
Sbjct: 506 FNRLSHEGLEPNVITYTVMIHGLCKSGQLENAKDLFLGMEEKGCAPNLVTFNTLMRGFCQ 565

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
              + + ++LL  +     SP   T + ++D L+K
Sbjct: 566 NDEMQKVVELLQEMAEKDFSPDASTISIVVDLLSK 600



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 75/285 (26%), Positives = 135/285 (47%), Gaps = 8/285 (2%)

Query: 289 SPDIVTYNSLVNFSCKQG--KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           +PD     + +  +CK G  K  +A  V N+L+     P   ++NTLL ++     +  V
Sbjct: 52  APDRGQLENFLKSNCKSGHIKRSEAFSVFNHLIDMQPTPPISSFNTLLGAVAKIKRYFDV 111

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             +   M+    +P   T NILIN  C    VD  +    +M+ +   P+ VT+ +++  
Sbjct: 112 ISLYKRMSLIGLAPDFITLNILINCYCNLNKVDFGLAVLGEMLRRGHSPNTVTFTSLVKG 171

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NG--- 462
           LC    ++EA  LL  +      P ++TY TL++GL   G    A+ L+ +M+  NG   
Sbjct: 172 LCLGSRISEATGLLRKMVRMGYRPNVVTYGTLLNGLCMTGNTMLAVKLHEEMLNGNGGFG 231

Query: 463 --ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
             I P+ + + T+I   C+   +++  +L  E+  RG      AY  +IHG+C + + + 
Sbjct: 232 VTIKPNLVCYCTIIDSLCKDGLIDKGKELFLEMKGRGISPDVVAYSSIIHGMCHTGRWEG 291

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           A  +   M+     P+   F+ ++  +   G  EEA  L + +I+
Sbjct: 292 AKGLFNEMVDEGVHPNVVTFNVLIDALCKAGKMEEANHLLKLMIQ 336


>gi|255542744|ref|XP_002512435.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548396|gb|EEF49887.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 546

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 125/404 (30%), Positives = 216/404 (53%), Gaps = 3/404 (0%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  L+ GL+++  I     V + M+     P  I++N+++ GLCK G++  A  ++++M 
Sbjct: 131 CNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMK 190

Query: 215 VSGCEPDVITYNTILR---TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           V G   +VITYNT++     M   GK  +A    K+    G  P  +T+ ILI+  CK  
Sbjct: 191 VRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDK 250

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            ++ A++V  +M  +G  P++VTYNSL+N  C  GK ++A  + + +++  ++PN IT+N
Sbjct: 251 NVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHN 310

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            LL+            ++ D M +   +P V TYNILI+  CK   ++ A   +  M+ K
Sbjct: 311 ALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGK 370

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              PD+ TYN ++  LC++G L  A  L+  ++       LITYN LID L  KG M+KA
Sbjct: 371 GVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKA 430

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           + L  +M   G+ P  +T+ T+I G+C+   +  A++L  ++ K G     + Y ++I G
Sbjct: 431 LRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKG 490

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            CK  K++ A  +L  M+     P+   +  + +++ + G   +
Sbjct: 491 FCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFVPD 534



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 198/380 (52%), Gaps = 3/380 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++      G++ D   +   M RR   P       +I GL ++ ++ KA  +++ M +
Sbjct: 132 NPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKV 191

Query: 181 SGGVPDTITYNMMVGGLCKRGQI---RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            G   + ITYN ++ G CK G+I     A A+L EM   G  P+ +T+N ++     +  
Sbjct: 192 RGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKN 251

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A+  + +  R+G  P ++TY  LI  +C    +  A  + D M      P+I+T+N+
Sbjct: 252 VSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNA 311

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK      A  + +++  +G+ PN  TYN L+ +       +    +  IM    
Sbjct: 312 LLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKG 371

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TYN LI GLC+ G ++ A N  ++M +K+ + D++TYN ++ +LC +G + +AL
Sbjct: 372 VCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKAL 431

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL  +      P  +TYNT+IDG  K+G +  A+ L  QM + G   +  T+  LI GF
Sbjct: 432 RLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGF 491

Query: 478 CRADQVEEAVDLLKEIGKRG 497
           C+ D++E+A  LL E+ ++G
Sbjct: 492 CKKDKLEDANGLLNEMLEKG 511



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 110/381 (28%), Positives = 189/381 (49%), Gaps = 3/381 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           ++I  +++V    K  + R         S  G +  V + N ++  +   G+       +
Sbjct: 92  NSIIVDILVWAYAKNLRTRLGFEAFKRASDYGLKLSVTSCNPLMSGLVKVGEIGDMEFVY 151

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           K+ +R+   P LI++ I+I  +CK   + +A ++++DM + G S +++TYN+L++  CK 
Sbjct: 152 KEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDIIEDMKVRGVSANVITYNTLIDGYCKM 211

Query: 306 GKYD---DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           GK      A  ++  + + G+ PN +T+N L+          A  K+   MN     P V
Sbjct: 212 GKIGKMYKADAILKEMRADGICPNEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNV 271

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN LINGLC  G V+ A    +QMV+   +P+I+T+N +L   CK  M+ +A +L   
Sbjct: 272 VTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDD 331

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P + TYN LID   K   ME A  LY  M+  G+ PD  T+  LI G CR   
Sbjct: 332 MPKQGITPNVTTYNILIDAYCKDENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGD 391

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E A +L+ E+  +  K     Y ++I  LC   ++  A+++L+ M     KP    ++T
Sbjct: 392 LEAARNLVSEMDTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNT 451

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++     +G    A  L  ++
Sbjct: 452 MIDGYCKEGNLRAALNLRSQM 472



 Score =  142 bits (357), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 82/298 (27%), Positives = 150/298 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++  FC    ++ A K+   M R+   P+     +LI GL    ++ +A+ + 
Sbjct: 235 NEVTFNILIDGFCKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALR 294

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV S   P+ IT+N ++ G CK   ++ A  L D+M   G  P+V TYN ++     +
Sbjct: 295 DQMVNSCLKPNIITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTTYNILIDAYCKD 354

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              + A   ++  L KG  P + TY  LI  +C++  +  A  ++ +M  +    D++TY
Sbjct: 355 ENMEDAFALYRIMLGKGVCPDVSTYNCLIAGLCRKGDLEAARNLVSEMDTKHLKADLITY 414

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  C +G+   A+ +++ +  +G++P+ +TYNT++      G   A   +   M +
Sbjct: 415 NILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNLRAALNLRSQMEK 474

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 V TYN+LI G CK   ++ A    N+M+ K   P+ +TY  V   + ++G +
Sbjct: 475 VGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIVTEEMMEKGFV 532



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 65/217 (29%), Positives = 118/217 (54%), Gaps = 3/217 (1%)

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +V + N L++GL K G +      + +M+ +  +P ++++N V+  LCK G LN+A  ++
Sbjct: 127 SVTSCNPLMSGLVKVGEIGDMEFVYKEMIRRRIEPTLISFNIVINGLCKVGKLNKAGDII 186

Query: 421 HLLNGSSCSPCLITYNTLIDG---LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
             +     S  +ITYNTLIDG   + K G M KA  +  +M  +GI P+++T   LI GF
Sbjct: 187 EDMKVRGVSANVITYNTLIDGYCKMGKIGKMYKADAILKEMRADGICPNEVTFNILIDGF 246

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+   V  A+ +  E+ ++G K     Y  +I+GLC + KV+ A  + + M++S  KP+ 
Sbjct: 247 CKDKNVSAAMKVFAEMNRQGVKPNVVTYNSLINGLCNNGKVNEATALRDQMVNSCLKPNI 306

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
              + ++     + M ++A +L+  + +  +    TT
Sbjct: 307 ITHNALLNGFCKNKMVKQAGELFDDMPKQGITPNVTT 343



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 34/128 (26%), Positives = 63/128 (49%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           D   ++ D  T N ++ + C++G++  A +L+D M R+   P       +I G  +   +
Sbjct: 403 DTKHLKADLITYNILIDSLCNKGEMKKALRLLDEMCRKGLKPSQLTYNTMIDGYCKEGNL 462

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
             A  +   M   G + +  TYN+++ G CK+ ++  A  LL+EM   G  P+ +TY  +
Sbjct: 463 RAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEMLEKGLIPNRMTYEIV 522

Query: 229 LRTMFDNG 236
              M + G
Sbjct: 523 TEEMMEKG 530



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 24/98 (24%), Positives = 50/98 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G L  A  L   M +  ++ +      LI+G  + D++E A+ +L  M
Sbjct: 448 TYNTMIDGYCKEGNLRAALNLRSQMEKVGRLANVATYNVLIKGFCKKDKLEDANGLLNEM 507

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +  G +P+ +TY ++   + ++G +      L +++VS
Sbjct: 508 LEKGLIPNRMTYEIVTEEMMEKGFVPDIEGHLYKVAVS 545


>gi|326500244|dbj|BAK06211.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 600

 Score =  222 bits (565), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 121/385 (31%), Positives = 211/385 (54%), Gaps = 5/385 (1%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS---GCEPDVITYNTILRTMFDNGKFKQ 240
           V D ++YN ++  LC++G + +A+ LL  MS        P+ I+Y T++R +  + +  Q
Sbjct: 53  VRDAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQ 112

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+G  +     G  P ++TY  LI  +C    +  A+E+L++M   G  P++V Y+ L++
Sbjct: 113 AVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLH 172

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+++    V   +  RG+EP+ + Y  L+ SL   G      +++D+M E    P
Sbjct: 173 GYCKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEP 232

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN+LIN +CK G V  A++    M  K  QPD+VTYNT++  L     ++EA+ LL
Sbjct: 233 NVVTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALL 292

Query: 421 -HLLNGSS-CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
             ++ G +   P L+T+N++I GL K G M +A+ +   M ENG   + +    LI G  
Sbjct: 293 EEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLL 352

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  +V++A++L+ E+   G +  +  Y ++I+G CK ++V+ A   L  M     +P+  
Sbjct: 353 RVHKVKKAMELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPV 412

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            +  ++K + D GM  +A  L+ ++
Sbjct: 413 HYIPLLKAMCDQGMMGQARDLFNEM 437



 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 140/482 (29%), Positives = 248/482 (51%), Gaps = 11/482 (2%)

Query: 87  VNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARR 146
           +N+ LR L + +    P+L S+  P V  D  + N +L   C +G L  A  L+ +M+  
Sbjct: 31  LNRHLRLLPLPES---PALLSAL-PSV-RDAVSYNTVLAALCRQGCLDAALFLLRVMSHE 85

Query: 147 NQI---PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
            ++   P+      L+R L    R  +A  +L+ M   G  PD +TY  ++ GLC    +
Sbjct: 86  PRLASRPNAISYTTLMRALCADRRAAQAVGLLRSMQDCGVRPDVVTYGTLIRGLCDAADV 145

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
            +A+ LL+EM  SG EP+V+ Y+ +L      G+++     +++   +G  P ++ YT L
Sbjct: 146 DTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVGKVFEEMSGRGIEPDVVMYTAL 205

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+ +C+   + +A  V+D M   G  P++VTYN L+N  CK+G   +A+ +  N+  +G+
Sbjct: 206 IDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVREALDLRKNMSEKGV 265

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIM--NEASHSPTVFTYNILINGLCKYGLVDRA 381
           +P+ +TYNTL+  L S    D    +L+ M   E    P + T+N +I+GLCK G + +A
Sbjct: 266 QPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNSVIHGLCKIGWMRQA 325

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +     M    C+ ++V +N ++G L +   + +A++L+  +  S   P   TY+ LI+G
Sbjct: 326 LQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSGLQPDSFTYSILING 385

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K   +E+A     +M   G+ P+ + +  L+   C    + +A DL  E+  R  K+ 
Sbjct: 386 FCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQGMMGQARDLFNEM-DRNCKLD 444

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            +AY  +IHG  KS +  +A + L+ MI     PD   +S  +   A  G    A ++ +
Sbjct: 445 AAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPINMFAKSGDLAAAERVLK 504

Query: 562 KL 563
           ++
Sbjct: 505 QM 506



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 125/457 (27%), Positives = 223/457 (48%), Gaps = 14/457 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   +++  C    +  A +L++ M      P+      L+ G  +  R E   
Sbjct: 125 VRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGYCKTGRWESVG 184

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KV + M   G  PD + Y  ++  LC+ G+++ A  ++D M+  G EP+V+TYN ++ +M
Sbjct: 185 KVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSM 244

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG---CS 289
              G  ++A+   K+   KG  P ++TY  LI  +     +  A+ +L++M ++G     
Sbjct: 245 CKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEM-MQGETRVR 303

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD++T+NS+++  CK G    A+ V   +   G   N + +N L+  L        V K 
Sbjct: 304 PDLMTFNSVIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLR---VHKVKKA 360

Query: 350 LDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           +++M+E + S   P  FTY+ILING CK   V+RA +  ++M  +  +P+ V Y  +L A
Sbjct: 361 MELMDEMASSGLQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKA 420

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           +C +GM+ +A  L + ++  +C      Y+T+I G  K G  + A      M++ G+ PD
Sbjct: 421 MCDQGMMGQARDLFNEMD-RNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPD 479

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+   I  F ++  +  A  +LK++   G     + +  +I G       +  +++  
Sbjct: 480 AVTYSIPINMFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTR 539

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            M +     D  + STIV  +   G + E  KL Q L
Sbjct: 540 EMTAKDVALDPKIISTIVTSL---GASIEGQKLLQSL 573



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/361 (26%), Positives = 176/361 (48%), Gaps = 7/361 (1%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +E D      ++ + C  GK+  A++++D+M  R   P+      LI  + +   + 
Sbjct: 192 GRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNVVTYNVLINSMCKEGSVR 251

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM--SVSGCEPDVITYNT 227
           +A  + + M   G  PD +TYN ++ GL    ++  A+ALL+EM    +   PD++T+N+
Sbjct: 252 EALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEEMMQGETRVRPDLMTFNS 311

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +   G  +QA+         GC   L+ + +LI  + +   + +A+E++D+MA  G
Sbjct: 312 VIHGLCKIGWMRQALQVRAMMAENGCRCNLVAFNLLIGGLLRVHKVKKAMELMDEMASSG 371

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD  TY+ L+N  CK  + + A   ++ +  +GMEP  + Y  LL ++  +G    + 
Sbjct: 372 LQPDSFTYSILINGFCKMRQVERAESYLSEMRHQGMEPEPVHYIPLLKAMCDQG---MMG 428

Query: 348 KILDIMNEASHSPTV--FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
           +  D+ NE   +  +    Y+ +I+G  K G    A      M+ +   PD VTY+  + 
Sbjct: 429 QARDLFNEMDRNCKLDAAAYSTMIHGAFKSGEKKIAEEFLKDMIDEGLIPDAVTYSIPIN 488

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
              K G L  A ++L  +  S   P +  +++LI G   KG  EK + L  +M    ++ 
Sbjct: 489 MFAKSGDLAAAERVLKQMTASGFVPDVAVFDSLIQGYGAKGDTEKILELTREMTAKDVAL 548

Query: 466 D 466
           D
Sbjct: 549 D 549



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 126/245 (51%), Gaps = 3/245 (1%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEA---SHSPTVFTYNILINGLCKYGLVDRAI 382
           ++++YNT+L +L  +GC DA   +L +M+     +  P   +Y  L+  LC      +A+
Sbjct: 55  DAVSYNTVLAALCRQGCLDAALFLLRVMSHEPRLASRPNAISYTTLMRALCADRRAAQAV 114

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                M     +PD+VTY T++  LC    ++ A++LL+ +  S   P ++ Y+ L+ G 
Sbjct: 115 GLLRSMQDCGVRPDVVTYGTLIRGLCDAADVDTAVELLNEMCESGIEPNVVVYSCLLHGY 174

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K G  E    ++ +M   GI PD + +  LI   CR  +V++A  ++  + +RG +   
Sbjct: 175 CKTGRWESVGKVFEEMSGRGIEPDVVMYTALIDSLCRHGKVKKAARVMDMMTERGLEPNV 234

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y ++I+ +CK   V  A+ + + M     +PD   ++T++  ++     +EA  L ++
Sbjct: 235 VTYNVLINSMCKEGSVREALDLRKNMSEKGVQPDVVTYNTLITGLSSVLEMDEAMALLEE 294

Query: 563 LIEWK 567
           +++ +
Sbjct: 295 MMQGE 299


>gi|38605763|emb|CAE05864.3| OSJNBa0044K18.6 [Oryza sativa Japonica Group]
          Length = 902

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 217/408 (53%), Gaps = 16/408 (3%)

Query: 83  HVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDI 142
           H+ +  K  R L + ++   P            +  T N ++  FCSRG++  A  ++  
Sbjct: 497 HLCSAGKPARALELLRQMPRP------------NAVTYNTVIAGFCSRGRVQAALDIMRE 544

Query: 143 MARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKR 200
           M  R  I P+ +    +I G  ++ R+++A KV   M+  G V P+ + YN ++GG C +
Sbjct: 545 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 604

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G++ +A+   D M   G    V TYN ++  +F +G+  +A    ++   KG  P + TY
Sbjct: 605 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 664

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            ILI   CK+  + +A+E+ ++M+  G    +VTY +L+    K+G+  +   + +  + 
Sbjct: 665 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 724

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           RG+ P+ + YN L++S  + G  D   +I+  M +   +P   TYN L+ GLC  G VD 
Sbjct: 725 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 784

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A    ++M  +  QPD+VTYNT++     +G + +AL++ + +     +P L+TYN LI 
Sbjct: 785 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 844

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           GL K G  + A  +  +M+ENGI+PDD T+ +LI G    D  E A+D
Sbjct: 845 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED--ERAID 890



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 206/396 (52%), Gaps = 6/396 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L++ CS GK   A +L+  M R N +        +I G     R++ A  +++ M
Sbjct: 490 TFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREM 545

Query: 179 VMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNG 236
              GG+ P+  TY  ++ G CK G++  A+ + DEM   G  +P+ + YN ++    D G
Sbjct: 546 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 605

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K   A+ +    + +G    + TY +L+  +        A E++++M  +G +PD+ TYN
Sbjct: 606 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 665

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L+N  CK+G    A+ +  N+  RG+    +TY  L+++L  +G     DK+ D     
Sbjct: 666 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 725

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P +  YN LIN     G +DRA     +M  K   PD VTYNT++  LC  G ++EA
Sbjct: 726 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 785

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +L+  +      P L+TYNTLI G + KG ++ A+ +  +MM  G +P  +T+  LI G
Sbjct: 786 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 845

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            C+  Q ++A +++KE+ + G    +S Y  +I GL
Sbjct: 846 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 881



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 208/393 (52%), Gaps = 6/393 (1%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T+N+M+  LC  G+   A+ LL +M      P+ +TYNT++      G+ + A+   +
Sbjct: 488 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 543

Query: 247 D-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCK 304
           + + R G  P   TY  +I   CK   +  A++V D+M  +G   P+ V YN+L+   C 
Sbjct: 544 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 603

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           QGK D A+L  + ++ RG+     TYN L+H+L   G      ++++ M     +P VFT
Sbjct: 604 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 663

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YNILING CK G V +A+  F  M  +  +  +VTY  ++ AL K+G + E  +L     
Sbjct: 664 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 723

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P L+ YN LI+  +  G +++A  + G+M +  I+PDD+T+ TL+ G C   +V+
Sbjct: 724 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 783

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  L+ E+ +RG +     Y  +I G      V  A+++   M++  + P    ++ ++
Sbjct: 784 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 843

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           + +  +G  ++A  + ++++E  +    +T ++
Sbjct: 844 QGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 876


>gi|357499681|ref|XP_003620129.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495144|gb|AES76347.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 543

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 123/404 (30%), Positives = 221/404 (54%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI+GL    +I +A      +V  G   D + Y  ++ GLCK G+ R+A+ LL  +  + 
Sbjct: 133 LIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNL 192

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P+V+ Y+TI+  M  +     A   + + + KG  P ++TY+ LI        +  AI
Sbjct: 193 VQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAI 252

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++ + M +E   PD+ T+N LV+  CK GK  +   V   ++ +G++PN +TY +L+   
Sbjct: 253 DLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 312

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                 +    IL  M++   +P + +YNILI+G CK   VD A+N F +M  K+  PD+
Sbjct: 313 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDV 372

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTYN+++  LCK G ++ AL+L+  ++     P +ITY++++D L K   ++KA+ L  +
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 432

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           + + GI P+  T+  LI G C+  ++E+A ++ +++  +G  +  + Y ++IHG C    
Sbjct: 433 LKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGL 492

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            D A+ +L  M  +   PD   +  I++ + D    ++A KL +
Sbjct: 493 FDEALALLSKMKDNSCIPDAVTYEIIIRSLFDKDENDKAEKLRE 536



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 125/500 (25%), Positives = 236/500 (47%), Gaps = 33/500 (6%)

Query: 87  VNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARR 146
           V KK       K +H   +P S       +    + I   F +   + DA  L   + R+
Sbjct: 14  VPKKFHSFQFLKNTHFNFIPYSSSKI---NFIPYSSISTTFHNNNDVVDAFSLFSRLLRQ 70

Query: 147 NQIP----------------DFHFCINLIRGLIRIDRIEKASKVL-------QIMVMSGG 183
           N  P                 +H  ++L + +      E  + VL       Q+M   G 
Sbjct: 71  NPTPPAIEFNKILGSLVKSKHYHTVLSLSQQM----EFEGINPVLFHFQHPHQLM---GY 123

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            P+TIT+  ++ GLC +GQI  A+   D +   G + D + Y T++  +   G+ + A+ 
Sbjct: 124 HPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALD 183

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
             +        P ++ Y+ +I+ +CK   +  A ++  +M  +G SP++VTY++L++   
Sbjct: 184 LLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 243

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
             G+  DA+ + N ++   ++P+  T+N L+      G       +  +M +    P V 
Sbjct: 244 TVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVV 303

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TY  L++G C    V++A +    M  +   PDI +YN ++   CK   ++EA+ L   +
Sbjct: 304 TYCSLMDGYCLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEM 363

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
           +     P ++TYN+LIDGL K G +  A+ L  +M + G+ PD IT+ +++   C+  QV
Sbjct: 364 HHKHIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQV 423

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           ++A+ LL ++  +G +     Y ++I GLCK  +++ A  + E ++   Y      ++ +
Sbjct: 424 DKAIALLTKLKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVM 483

Query: 544 VKKVADDGMTEEAYKLWQKL 563
           +    + G+ +EA  L  K+
Sbjct: 484 IHGFCNKGLFDEALALLSKM 503



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/397 (25%), Positives = 203/397 (51%), Gaps = 18/397 (4%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC----------------EPDVITYNTI 228
           P  I +N ++G L K     + ++L  +M   G                  P+ IT+ T+
Sbjct: 74  PPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQHPHQLMGYHPNTITFTTL 133

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           ++ +   G+  QA+ F  + +  G     + Y  LI  +CK      A+++L  +     
Sbjct: 134 IKGLCLKGQIHQALLFHDNVVAMGFQLDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLV 193

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVD 347
            P++V Y+++++  CK    +DA  + + ++S+G+ PN +TY+ L+    + G   DA+D
Sbjct: 194 QPNVVMYSTIIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAID 253

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            + + M   +  P V+T+NIL++G CK G +      F  M+ +  +P++VTY +++   
Sbjct: 254 -LFNKMILENIKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGY 312

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C    +N+A  +L+ ++    +P + +YN LIDG  K   +++AM L+ +M    I PD 
Sbjct: 313 CLVKEVNKAKSILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDV 372

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+ +LI G C+  ++  A+ L+ E+  RG       Y  ++  LCK+ +VD AI +L  
Sbjct: 373 VTYNSLIDGLCKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTK 432

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +     +P+   ++ ++  +   G  E+A+ +++ L+
Sbjct: 433 LKDQGIRPNMYTYTILIDGLCKGGRLEDAHNIFEDLL 469



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 95/340 (27%), Positives = 179/340 (52%), Gaps = 1/340 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I G+ +   +  A  +   MV  G  P+ +TY+ ++ G    GQ++ AI L ++M +  
Sbjct: 203 IIDGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILEN 262

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +PDV T+N ++     +GK K+    +   +++G  P ++TY  L++  C    + +A 
Sbjct: 263 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAK 322

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L  M+  G +PDI +YN L++  CK  K D+A+ +   +  + + P+ +TYN+L+  L
Sbjct: 323 SILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGL 382

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      K++D M++    P + TY+ +++ LCK   VD+AI    ++  +  +P++
Sbjct: 383 CKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNM 442

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            TY  ++  LCK G L +A  +   L     +  + TY  +I G   KG  ++A+ L  +
Sbjct: 443 YTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSK 502

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           M +N   PD +T+  +I      D+ ++A + L+E+  RG
Sbjct: 503 MKDNSCIPDAVTYEIIIRSLFDKDENDKA-EKLREMITRG 541



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 141/279 (50%), Gaps = 1/279 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  FC  GK+ +   +  +M ++   P+     +L+ G   +  + KA 
Sbjct: 263 IKPDVYTFNILVDGFCKDGKMKEGKTVFAMMMKQGIKPNVVTYCSLMDGYCLVKEVNKAK 322

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  M   G  PD  +YN+++ G CK  ++  A+ L  EM      PDV+TYN+++  +
Sbjct: 323 SILYTMSQRGVNPDIQSYNILIDGFCKIKKVDEAMNLFKEMHHKHIIPDVVTYNSLIDGL 382

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK   A+    +   +G PP +ITY+ +++ +CK   + +AI +L  +  +G  P++
Sbjct: 383 CKLGKISYALKLVDEMHDRGVPPDIITYSSILDALCKNHQVDKAIALLTKLKDQGIRPNM 442

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY  L++  CK G+ +DA  +  +LL +G      TY  ++H   ++G +D    +L  
Sbjct: 443 YTYTILIDGLCKGGRLEDAHNIFEDLLVKGYNITVNTYTVMIHGFCNKGLFDEALALLSK 502

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           M + S  P   TY I+I  L      D+A     +M+++
Sbjct: 503 MKDNSCIPDAVTYEIIIRSLFDKDENDKA-EKLREMITR 540



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 60/259 (23%), Positives = 110/259 (42%), Gaps = 19/259 (7%)

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           DA  + + LL +   P +I +N +L SL     +  V  +   M     +P +F +    
Sbjct: 59  DAFSLFSRLLRQNPTPPAIEFNKILGSLVKSKHYHTVLSLSQQMEFEGINPVLFHFQ--- 115

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
                           +Q++     P+ +T+ T++  LC +G +++AL     +      
Sbjct: 116 --------------HPHQLMGY--HPNTITFTTLIKGLCLKGQIHQALLFHDNVVAMGFQ 159

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
              + Y TLI GL K G    A+ L  ++  N + P+ + + T+I G C+   V +A DL
Sbjct: 160 LDQVGYGTLIHGLCKVGETRAALDLLRRVDGNLVQPNVVMYSTIIDGMCKDKHVNDAFDL 219

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             E+  +G       Y  +I G     ++  AI +   MI    KPD   F+ +V     
Sbjct: 220 YSEMVSKGISPNVVTYSALISGFFTVGQLKDAIDLFNKMILENIKPDVYTFNILVDGFCK 279

Query: 550 DGMTEEAYKLWQKLIEWKV 568
           DG  +E   ++  +++  +
Sbjct: 280 DGKMKEGKTVFAMMMKQGI 298


>gi|224145829|ref|XP_002325779.1| predicted protein [Populus trichocarpa]
 gi|222862654|gb|EEF00161.1| predicted protein [Populus trichocarpa]
          Length = 586

 Score =  222 bits (565), Expect = 5e-55,   Method: Compositional matrix adjust.
 Identities = 121/389 (31%), Positives = 205/389 (52%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
            LI GL +     +A ++   MV  G  PD  TY  ++ GLCK G+  +A  L+ +M   
Sbjct: 166 TLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEV 225

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           GC+PDV+TY+T++ ++  +    +A+  +     KG  P +++YT LI+ +C       A
Sbjct: 226 GCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEA 285

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +L++M      PDIVT++ L++  CK+G   +A  V+  +   G+EPN ITYN+L+H 
Sbjct: 286 SAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHG 345

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +       K+ D+M      P VF+Y+ILING C    +D A   FN+M+ +   P+
Sbjct: 346 YSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPN 405

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            V+Y T++ A C+ G L EA +L   ++ +   P L TY+ L++G  K+G + KA  L+ 
Sbjct: 406 TVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFR 465

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M    + P+ + +  LI   C++  +  A  L  E+   G +     Y  +I+GLCK  
Sbjct: 466 AMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEG 525

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVK 545
            +D A++    M      P++  ++ I++
Sbjct: 526 LLDEALEAFRKMEEDGCPPNEFSYNVIIR 554



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 112/435 (25%), Positives = 223/435 (51%), Gaps = 9/435 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCI----NLIRGLIRIDRIEKASKVL-QIMVMSGGVPDTIT 189
           DA    + M  R  +P    CI     L+  ++R+ +   A   L + M ++G  P+T T
Sbjct: 73  DALASFNHMLHRKPLP----CIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCT 128

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
            N+++   C    +    ++L ++   G +P +IT+ T++  +   G+F QA+  + D +
Sbjct: 129 LNILINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMV 188

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            +GC P + TYT +I  +CK    A A  ++  M   GC PD+VTY++L++  CK    +
Sbjct: 189 ARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVN 248

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A+ + + + ++G+ P  ++Y +L+  L S   W     +L+ M   +  P + T+++LI
Sbjct: 249 EALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLI 308

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +  CK G V  A      M     +P+++TYN+++     +  + EA +L  ++    C 
Sbjct: 309 DIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCK 368

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P + +Y+ LI+G      +++A  L+ +M+  G++P+ +++ TLI  FC+  ++ EA +L
Sbjct: 369 PDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREAREL 428

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            K++   G       Y +++ G CK   +  A ++   M  +  KP+  +++ ++  +  
Sbjct: 429 FKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCK 488

Query: 550 DGMTEEAYKLWQKLI 564
            G    A KL+ +L 
Sbjct: 489 SGNLNHARKLFSELF 503



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 207/419 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G+   A +L D M  R   PD +    +I GL ++     A+ +++ M
Sbjct: 163 TFTTLINGLCKAGEFAQALELFDDMVARGCQPDVYTYTTIINGLCKMGETAAAAGLIKKM 222

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD +TY+ ++  LCK   +  A+ +   M   G  P V++Y ++++ +    ++
Sbjct: 223 GEVGCQPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRW 282

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A     +       P ++T+++LI+  CK+  +  A  VL  M   G  P+++TYNSL
Sbjct: 283 KEASAMLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSL 342

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++    Q +  +A  + + +++RG +P+  +Y+ L++        D   ++ + M     
Sbjct: 343 MHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGL 402

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   +Y  LI+  C+ G +  A   F  M +    PD+ TY+ +L   CK+G L +A +
Sbjct: 403 TPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFR 462

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   + G+   P L+ Y  LID + K G +  A  L+ ++  +G+ PD   + T+I G C
Sbjct: 463 LFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLC 522

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           +   ++EA++  +++ + G      +Y ++I G  + K    A+Q++  M    +  D+
Sbjct: 523 KEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADE 581



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 190/384 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + D  T   I+   C  G+   A+ LI  M      PD      LI  L +   + +A  
Sbjct: 193 QPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEALD 252

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G  P  ++Y  ++ GLC   + + A A+L+EM+     PD++T++ ++    
Sbjct: 253 IFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIFC 312

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G   +A G  K     G  P +ITY  L+     Q  +  A ++ D M   GC PD+ 
Sbjct: 313 KEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVF 372

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +Y+ L+N  C   + D+A  + N ++ +G+ PN+++Y TL+H+    G      ++   M
Sbjct: 373 SYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDM 432

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +   + P + TY++L+ G CK G + +A   F  M     +P++V Y  ++ ++CK G L
Sbjct: 433 HTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNL 492

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           N A +L   L      P +  Y T+I+GL K+G +++A+  + +M E+G  P++ ++  +
Sbjct: 493 NHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVI 552

Query: 474 IWGFCRADQVEEAVDLLKEIGKRG 497
           I GF +      AV L+ E+  +G
Sbjct: 553 IRGFLQHKDESRAVQLIGEMRDKG 576



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 98/356 (27%), Positives = 179/356 (50%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + D  T + ++ + C    + +A  +   M  +   P      +LI+GL    R ++AS 
Sbjct: 228 QPDVVTYSTLIDSLCKDRLVNEALDIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASA 287

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L  M     +PD +T+++++   CK G +  A  +L  M+  G EP+VITYN+++    
Sbjct: 288 MLNEMTSLNIMPDIVTFSLLIDIFCKEGNVLEAQGVLKTMTEMGVEPNVITYNSLMHGYS 347

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              +  +A   +   + +GC P + +Y+ILI   C    I  A ++ ++M  +G +P+ V
Sbjct: 348 LQMEVVEARKLFDVMITRGCKPDVFSYSILINGYCMVKRIDEAKQLFNEMIHQGLTPNTV 407

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +Y +L++  C+ GK  +A  +  ++ + G  P+  TY+ LL     +G      ++   M
Sbjct: 408 SYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEGFCKQGYLGKAFRLFRAM 467

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P +  Y ILI+ +CK G ++ A   F+++     QPD+  Y T++  LCKEG+L
Sbjct: 468 QGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPDVQIYTTIINGLCKEGLL 527

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +EAL+    +    C P   +YN +I G  +     +A+ L G+M + G   D+ T
Sbjct: 528 DEALEAFRKMEEDGCPPNEFSYNVIIRGFLQHKDESRAVQLIGEMRDKGFVADEGT 583



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 125/261 (47%), Gaps = 1/261 (0%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           DDA+   N++L R   P  I +N LL ++   R  +DAV  +   M  A  SP   T NI
Sbjct: 72  DDALASFNHMLHRKPLPCIIQFNKLLSAIVRMRQYYDAVISLSKQMELAGLSPNTCTLNI 131

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LIN  C    VD   +   +++    QP I+T+ T++  LCK G   +AL+L   +    
Sbjct: 132 LINCFCLMQHVDLGFSVLAKVIKLGLQPTIITFTTLINGLCKAGEFAQALELFDDMVARG 191

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C P + TY T+I+GL K G    A  L  +M E G  PD +T+ TLI   C+   V EA+
Sbjct: 192 CQPDVYTYTTIINGLCKMGETAAAAGLIKKMGEVGCQPDVVTYSTLIDSLCKDRLVNEAL 251

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           D+   +  +G      +Y  +I GLC   +   A  +L  M S    PD   FS ++   
Sbjct: 252 DIFSYMKAKGISPTVVSYTSLIQGLCSFSRWKEASAMLNEMTSLNIMPDIVTFSLLIDIF 311

Query: 548 ADDGMTEEAYKLWQKLIEWKV 568
             +G   EA  + + + E  V
Sbjct: 312 CKEGNVLEAQGVLKTMTEMGV 332



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 64/226 (28%), Positives = 116/226 (51%), Gaps = 2/226 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKA 171
           VE +  T N ++  +  + ++ +A KL D+M  R   PD F + I LI G   + RI++A
Sbjct: 332 VEPNVITYNSLMHGYSLQMEVVEARKLFDVMITRGCKPDVFSYSI-LINGYCMVKRIDEA 390

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            ++   M+  G  P+T++Y  ++   C+ G++R A  L  +M  +G  PD+ TY+ +L  
Sbjct: 391 KQLFNEMIHQGLTPNTVSYTTLIHAFCQLGKLREARELFKDMHTNGYLPDLCTYSVLLEG 450

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G   +A   ++        P L+ YTILI+ +CK   +  A ++  ++ + G  PD
Sbjct: 451 FCKQGYLGKAFRLFRAMQGTYLKPNLVMYTILIDSMCKSGNLNHARKLFSELFVHGLQPD 510

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +  Y +++N  CK+G  D+A+     +   G  PN  +YN ++   
Sbjct: 511 VQIYTTIINGLCKEGLLDEALEAFRKMEEDGCPPNEFSYNVIIRGF 556


>gi|357142290|ref|XP_003572522.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 669

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 237/460 (51%), Gaps = 41/460 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N +L+  C   +   A +L++ M R N  P+       IR   +   ++ A 
Sbjct: 206 VAPDTYTYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAV 265

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L+ M   G  PD + Y+ +V G  ++G++  A+ LL+ M    C+P+ + YN  L+ +
Sbjct: 266 QLLERMPRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTML---CKPNTVCYNAALKGL 322

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               ++K       + +RK CPP   T+++L   +C+   +  A+EV++ M   GC PD+
Sbjct: 323 CMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDV 382

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V YN+L+N+  +QG+ DDA+++++++L     P++I++N  L +L     W  V++++  
Sbjct: 383 VIYNTLINYFSEQGRVDDALMLLDSMLC---NPDTISFNAALKALCRTERWYDVEELIAQ 439

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV----------------------- 389
           M          T+NILI+ LC++GLV+ AI  F QM                        
Sbjct: 440 MLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGL 499

Query: 390 ---------SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                    S  C+PDI +YN VL  LC+     +A +L+  +    C P  IT+N LI+
Sbjct: 500 VESAIELFQSMPCKPDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILIN 559

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
            L +KG  ++A+ ++ QM E G +PD  T+  LI GF    ++++A++LL  +  + + +
Sbjct: 560 SLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLLSTMSCKPDAI 619

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
              +Y   + GLC++++   A +++  M+  +  P++  F
Sbjct: 620 ---SYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTF 656



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 133/495 (26%), Positives = 254/495 (51%), Gaps = 47/495 (9%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           S+PSS+ P V       N +++  C+  +L DA +++D + + +   D      L+ G  
Sbjct: 101 SMPSSEPPAV----IACNILIKKLCAHRRLADAERVLDAL-KESGSADAVSHNTLVAGYC 155

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           R  R+  A +VL+   +SG   + +TY  ++ G C+ G++  A+ L+  M V+   PD  
Sbjct: 156 RDGRLADAERVLEAAKVSGAA-NVVTYTALINGYCRSGRLADALNLIASMPVA---PDTY 211

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           TYNT+L+ +    ++++A    ++ +R  C P  +T+   I   C+   +  A+++L+ M
Sbjct: 212 TYNTVLKGLCGAKQWEKAEELMEEMIRNNCHPNEVTFATQIRSFCQNGLLDHAVQLLERM 271

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              GC+PD+V Y++LVN   +QG+ DDA++++N +L +   PN++ YN  L  L     W
Sbjct: 272 PRYGCTPDVVIYSTLVNGFSEQGRVDDALVLLNTMLCK---PNTVCYNAALKGLCMAERW 328

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             V +++  M      P   T+++L + LC++GLVD A+    QM    C+PD+V YNT+
Sbjct: 329 KDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQKYGCRPDVVIYNTL 388

Query: 404 LGALCKEGMLNEALQLLH--LLNGSS------------------------------CSPC 431
           +    ++G +++AL LL   L N  +                              C   
Sbjct: 389 INYFSEQGRVDDALMLLDSMLCNPDTISFNAALKALCRTERWYDVEELIAQMLREDCPLI 448

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
            +T+N LID L + G +  A+ ++ QM +   +PD +T+ +LI GF     VE A++L +
Sbjct: 449 EMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQ 508

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            +  + +     +Y  V+ GLC++ + + A +++  M      P++  F+ ++  +   G
Sbjct: 509 SMPCKPDIF---SYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKG 565

Query: 552 MTEEAYKLWQKLIEW 566
             + A ++++++ E+
Sbjct: 566 FADRAIEVFKQMPEY 580



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 179/351 (50%), Gaps = 9/351 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  L+  C   +  D  +LI  M R++  P+      L   L +   ++ A +V++ M  
Sbjct: 316 NAALKGLCMAERWKDVGELIAEMVRKDCPPNEATFSMLTSCLCQHGLVDCAMEVVEQMQK 375

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD + YN ++    ++G++  A+ LLD M    C PD I++N  L+ +    ++  
Sbjct: 376 YGCRPDVVIYNTLINYFSEQGRVDDALMLLDSML---CNPDTISFNAALKALCRTERWYD 432

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                   LR+ CP   +T+ ILI+ +C+   +  AIEV + M    C+PDIVTY+SL+N
Sbjct: 433 VEELIAQMLREDCPLIEMTFNILIDSLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLIN 492

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +QG  + A+ +  ++  +   P+  +YN +L  L     W+   +++  M      P
Sbjct: 493 GFSEQGLVESAIELFQSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIANMARKDCPP 549

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+NILIN LC+ G  DRAI  F QM      PDI TYN ++    ++G L++AL LL
Sbjct: 550 NEITFNILINSLCQKGFADRAIEVFKQMPEYGSTPDIFTYNALINGFSEQGRLDDALNLL 609

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             +   SC P  I+YN+ + GL +    ++A  +  +M+     P+++T +
Sbjct: 610 STM---SCKPDAISYNSTLKGLCRAERWKEAEEIVAEMLRKKCPPNEVTFK 657



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/265 (30%), Positives = 129/265 (48%), Gaps = 8/265 (3%)

Query: 102 DPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIR 160
           D +L   D      D  + N  L+  C   +  D  +LI  M R +  P      N LI 
Sbjct: 399 DDALMLLDSMLCNPDTISFNAALKALCRTERWYDVEELIAQMLRED-CPLIEMTFNILID 457

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
            L +   +  A +V + M      PD +TY+ ++ G  ++G + SAI L   M    C+P
Sbjct: 458 SLCQHGLVNHAIEVFEQMPKYRCTPDIVTYSSLINGFSEQGLVESAIELFQSMP---CKP 514

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D+ +YN +L+ +    +++ A     +  RK CPP  IT+ ILI  +C++    RAIEV 
Sbjct: 515 DIFSYNAVLKGLCRAARWEDAGELIANMARKDCPPNEITFNILINSLCQKGFADRAIEVF 574

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
             M   G +PDI TYN+L+N   +QG+ DDA   +N L +   +P++I+YN+ L  L   
Sbjct: 575 KQMPEYGSTPDIFTYNALINGFSEQGRLDDA---LNLLSTMSCKPDAISYNSTLKGLCRA 631

Query: 341 GCWDAVDKILDIMNEASHSPTVFTY 365
             W   ++I+  M      P   T+
Sbjct: 632 ERWKEAEEIVAEMLRKKCPPNEVTF 656


>gi|222629056|gb|EEE61188.1| hypothetical protein OsJ_15186 [Oryza sativa Japonica Group]
          Length = 897

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 217/408 (53%), Gaps = 16/408 (3%)

Query: 83  HVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDI 142
           H+ +  K  R L + ++   P            +  T N ++  FCSRG++  A  ++  
Sbjct: 492 HLCSAGKPARALELLRQMPRP------------NAVTYNTVIAGFCSRGRVQAALDIMRE 539

Query: 143 MARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKR 200
           M  R  I P+ +    +I G  ++ R+++A KV   M+  G V P+ + YN ++GG C +
Sbjct: 540 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 599

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G++ +A+   D M   G    V TYN ++  +F +G+  +A    ++   KG  P + TY
Sbjct: 600 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTY 659

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            ILI   CK+  + +A+E+ ++M+  G    +VTY +L+    K+G+  +   + +  + 
Sbjct: 660 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVR 719

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           RG+ P+ + YN L++S  + G  D   +I+  M +   +P   TYN L+ GLC  G VD 
Sbjct: 720 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 779

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A    ++M  +  QPD+VTYNT++     +G + +AL++ + +     +P L+TYN LI 
Sbjct: 780 ARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 839

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           GL K G  + A  +  +M+ENGI+PDD T+ +LI G    D  E A+D
Sbjct: 840 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED--ERAID 885



 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 206/396 (52%), Gaps = 6/396 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L++ CS GK   A +L+  M R N +        +I G     R++ A  +++ M
Sbjct: 485 TFNIMLRHLCSAGKPARALELLRQMPRPNAV----TYNTVIAGFCSRGRVQAALDIMREM 540

Query: 179 VMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNG 236
              GG+ P+  TY  ++ G CK G++  A+ + DEM   G  +P+ + YN ++    D G
Sbjct: 541 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 600

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K   A+ +    + +G    + TY +L+  +        A E++++M  +G +PD+ TYN
Sbjct: 601 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFTYN 660

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L+N  CK+G    A+ +  N+  RG+    +TY  L+++L  +G     DK+ D     
Sbjct: 661 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAVRR 720

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P +  YN LIN     G +DRA     +M  K   PD VTYNT++  LC  G ++EA
Sbjct: 721 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 780

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +L+  +      P L+TYNTLI G + KG ++ A+ +  +MM  G +P  +T+  LI G
Sbjct: 781 RKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 840

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            C+  Q ++A +++KE+ + G    +S Y  +I GL
Sbjct: 841 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGL 876



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 208/393 (52%), Gaps = 6/393 (1%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T+N+M+  LC  G+   A+ LL +M      P+ +TYNT++      G+ + A+   +
Sbjct: 483 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 538

Query: 247 D-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCK 304
           + + R G  P   TY  +I   CK   +  A++V D+M  +G   P+ V YN+L+   C 
Sbjct: 539 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 598

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           QGK D A+L  + ++ RG+     TYN L+H+L   G      ++++ M     +P VFT
Sbjct: 599 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLAPDVFT 658

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YNILING CK G V +A+  F  M  +  +  +VTY  ++ AL K+G + E  +L     
Sbjct: 659 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTALIYALSKKGQVQETDKLFDEAV 718

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P L+ YN LI+  +  G +++A  + G+M +  I+PDD+T+ TL+ G C   +V+
Sbjct: 719 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 778

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  L+ E+ +RG +     Y  +I G      V  A+++   M++  + P    ++ ++
Sbjct: 779 EARKLIDEMTERGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 838

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           + +  +G  ++A  + ++++E  +    +T ++
Sbjct: 839 QGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 871


>gi|224113511|ref|XP_002316516.1| predicted protein [Populus trichocarpa]
 gi|222865556|gb|EEF02687.1| predicted protein [Populus trichocarpa]
          Length = 761

 Score =  221 bits (564), Expect = 6e-55,   Method: Compositional matrix adjust.
 Identities = 140/484 (28%), Positives = 239/484 (49%), Gaps = 36/484 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+      G    A K+   M     +PD +     I+   R  R   A ++L  MV 
Sbjct: 115 NAIMNILVESGYFKQAHKVFLRMKNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVS 174

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   + + Y  +V G  +      A  L ++M   G  PDV T+N +L T+   G+ ++
Sbjct: 175 QGCQLNAVAYCTVVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQE 234

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           +       L+KG    L T+ I I+ +C++  ++ A+ +LD +  EG +PD+VTYN+L+ 
Sbjct: 235 SERLLNKVLKKGMCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLIC 294

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK     +A   ++ L++ G+EP+  TYNTL+      G     +KIL         P
Sbjct: 295 GLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVP 354

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             FTY  LINGLC+   +DRA+  FN  + K  +P ++ YN ++  LC+EG++ +ALQ++
Sbjct: 355 DEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMM 414

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           + ++ + CS  + TYN +I+GL K GC+  A  L    +  G  PD  T  TLI G+C+ 
Sbjct: 415 NEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQ 474

Query: 481 DQVEEAVDLLKEIGKRG--------NKMRNS---------------------------AY 505
            ++E  + +L ++   G        N + N                             Y
Sbjct: 475 LKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITY 534

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++   LCK+ KV+ A+ +++ +++    PD   F+TI+   A++G  + AY+L++++ E
Sbjct: 535 NILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGE 594

Query: 566 -WKV 568
            +KV
Sbjct: 595 QYKV 598



 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/427 (30%), Positives = 218/427 (51%), Gaps = 1/427 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  +Q  C +G L+ A  ++D + R    PD      LI GL +   + +A K L  +
Sbjct: 253 TFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKL 312

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD  TYN ++ G CK G +++A  +L      G  PD  TY +++  +  N + 
Sbjct: 313 VNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEI 372

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  +   L KG  P +I Y +LI+ +C++  I +A++++++M+  GCS DI TYN +
Sbjct: 373 DRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLV 432

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G   DA  ++N+ +++G  P+  T+NTL+     +   +   +IL+ M     
Sbjct: 433 INGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGV 492

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V TYN ++NGL K    +  + +F  MV K C P+ +TYN +  +LCK G +NEAL 
Sbjct: 493 TPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALD 552

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGF 477
           L+  +     +P  +++ T+I G A  G ++ A  L+ +M E   +S    T+  +I  F
Sbjct: 553 LVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAF 612

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
                +     L  E+G  G       YR++I G C +   D   + L  MI   + P  
Sbjct: 613 AEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSL 672

Query: 538 TVFSTIV 544
           T F  ++
Sbjct: 673 TTFGRVI 679



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 123/416 (29%), Positives = 214/416 (51%), Gaps = 1/416 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F       +A +L + M R    PD      L+  L +   ++++ ++L  ++  G
Sbjct: 187 VVAGFYEENYRVEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKG 246

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T+N+ + GLC++G +  A+++LD +   G  PDV+TYNT++  +  N    +A 
Sbjct: 247 MCSNLFTFNIFIQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAE 306

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            +    +  G  P   TY  LI+  CK   +  A ++L     +G  PD  TY SL+N  
Sbjct: 307 KYLHKLVNGGLEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYCSLINGL 366

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+  + D A+ + N  L +G++P  I YN L+  L   G      ++++ M+E   S  +
Sbjct: 367 CQNDEIDRALALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDI 426

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TYN++INGLCK G V  A N  N  ++K   PD+ T+NT++   CK+  +   +Q+L+ 
Sbjct: 427 WTYNLVINGLCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNK 486

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P +ITYN++++GL+K    E  M  +  M+E G  P+ IT+  L    C+A +
Sbjct: 487 MWSHGVTPDVITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTESLCKAGK 546

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           V EA+DL+ EI  +G      ++  +I G   +  +  A Q+   M   +YK   T
Sbjct: 547 VNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGAYQLFRRM-GEQYKVSHT 601



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 224/462 (48%), Gaps = 3/462 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKV 174
           D  T NK+L   C +G++ ++ +L++ + ++    + F F I  I+GL R   +  A  +
Sbjct: 215 DVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNI-FIQGLCRKGMLSGAMSM 273

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L  ++  G  PD +TYN ++ GLCK   +  A   L ++   G EPD  TYNT++     
Sbjct: 274 LDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTLIDGYCK 333

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G  + A    +  + KG  P   TY  LI  +C+   I RA+ + +    +G  P ++ 
Sbjct: 334 MGMLQNAEKILQGAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALGKGLKPTVIL 393

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L+   C++G    A+ ++N +   G   +  TYN +++ L   GC    + +++   
Sbjct: 394 YNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAI 453

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
              + P VFT+N LI+G CK   ++  I   N+M S    PD++TYN+VL  L K     
Sbjct: 454 AKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNE 513

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           + ++    +    C P  ITYN L + L K G + +A+ L  +++  GI+PD ++  T+I
Sbjct: 514 DLMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATII 573

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRY 533
            GF     ++ A  L + +G++      +A Y ++I+   +   + M  ++   M +   
Sbjct: 574 SGFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGC 633

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            PD   +  ++      G T+  YK   ++IE       TT 
Sbjct: 634 APDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTF 675



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 203/426 (47%), Gaps = 38/426 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKA 171
           +E D  T N ++  +C  G L +A K++     +  +PD F +C +LI GL + D I++A
Sbjct: 317 LEPDGFTYNTLIDGYCKMGMLQNAEKILQGAICKGFVPDEFTYC-SLINGLCQNDEIDRA 375

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +    +  G  P  I YNM++ GLC+ G I  A+ +++EMS +GC  D+ TYN ++  
Sbjct: 376 LALFNAALGKGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVING 435

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   G    A     D + KG  P + T+  LI+  CKQ  +   I++L+ M   G +PD
Sbjct: 436 LCKMGCVSDANNLMNDAIAKGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPD 495

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           ++TYNS++N   K  K +D +     ++ +G  PN ITYN L  S               
Sbjct: 496 VITYNSVLNGLSKAVKNEDLMETFETMVEKGCVPNKITYNILTES--------------- 540

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
                               LCK G V+ A++  +++++K   PD V++ T++      G
Sbjct: 541 --------------------LCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNG 580

Query: 412 MLNEALQLLHLLNGS-SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
            L  A QL   +      S    TYN +I+  A+K  +     L+ +M   G +PD  T+
Sbjct: 581 DLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTY 640

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           R +I GFC     +     L E+ ++G     + +  VI+ LC   +V  A+ ++  M+ 
Sbjct: 641 RVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVH 700

Query: 531 SRYKPD 536
           +   P+
Sbjct: 701 NGIVPE 706



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 110/384 (28%), Positives = 188/384 (48%), Gaps = 41/384 (10%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           ++G+++ A+ + + M    CEP V++YN I+  + ++G FKQA   +      G  P + 
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRMKNVGIVPDVY 147

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCS----------------------------- 289
           T+TI I+  C+      A+ +L++M  +GC                              
Sbjct: 148 TFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYRVEAYELFNDM 207

Query: 290 ------PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
                 PD+ T+N L++  CK+G+  ++  ++N +L +GM  N  T+N  +  L  +G  
Sbjct: 208 LRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIFIQGLCRKGML 267

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
                +LD +     +P V TYN LI GLCK   V  A    +++V+   +PD  TYNT+
Sbjct: 268 SGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGLEPDGFTYNTL 327

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCS---PCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           +   CK GML  A ++L    G+ C    P   TY +LI+GL +   +++A+ L+   + 
Sbjct: 328 IDGYCKMGMLQNAEKILQ---GAICKGFVPDEFTYCSLINGLCQNDEIDRALALFNAALG 384

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G+ P  I +  LI G C+   + +A+ ++ E+ + G       Y LVI+GLCK   V  
Sbjct: 385 KGLKPTVILYNMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSD 444

Query: 521 AIQVLELMISSRYKPDDTVFSTIV 544
           A  ++   I+  Y PD   F+T++
Sbjct: 445 ANNLMNDAIAKGYVPDVFTFNTLI 468



 Score =  112 bits (280), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 76/314 (24%), Positives = 144/314 (45%), Gaps = 36/314 (11%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++  C  G +  A ++++ M+      D      +I GL ++  +  A+ ++   + 
Sbjct: 395 NMLIKGLCQEGLILQALQMMNEMSENGCSSDIWTYNLVINGLCKMGCVSDANNLMNDAIA 454

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G VPD  T+N ++ G CK+ ++ + I +L++M   G  PDVITYN++L  +    K + 
Sbjct: 455 KGYVPDVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNED 514

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            +  ++  + KGC P  ITY IL E +CK   +  A++++D++  +G +PD V++ ++++
Sbjct: 515 LMETFETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIIS 574

Query: 301 FSCKQGKYDDAV--------------------LVINNLLSR----------------GME 324
                G    A                     ++IN    +                G  
Sbjct: 575 GFANNGDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCA 634

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P++ TY  ++      G  D+  K L  M E    P++ T+  +IN LC    V  A++ 
Sbjct: 635 PDTYTYRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDI 694

Query: 385 FNQMVSKNCQPDIV 398
            + MV     P++V
Sbjct: 695 IHFMVHNGIVPEVV 708



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 77/306 (25%), Positives = 147/306 (48%), Gaps = 10/306 (3%)

Query: 275 RAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME-PNSI---T 329
           +A+E+ + +  E G    ++TY  ++    K G + + V + N L    M+  NS+    
Sbjct: 22  KALEMFNKVKREDGFKHSLLTYKCIIQ---KLGFHGNFVAMENVLAETRMDIDNSLLEGV 78

Query: 330 YNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           Y   + S G +G   +AVD + + M+  +  P+V +YN ++N L + G   +A   F +M
Sbjct: 79  YIGAMKSYGRKGKVQEAVD-VFERMDFYNCEPSVLSYNAIMNILVESGYFKQAHKVFLRM 137

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
            +    PD+ T+   + + C+    + AL+LL+ +    C    + Y T++ G  ++   
Sbjct: 138 KNVGIVPDVYTFTIRIKSFCRTKRPHSALRLLNNMVSQGCQLNAVAYCTVVAGFYEENYR 197

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +A  L+  M+  GI PD  T   L+   C+  +V+E+  LL ++ K+G       + + 
Sbjct: 198 VEAYELFNDMLRIGIFPDVSTFNKLLHTLCKKGEVQESERLLNKVLKKGMCSNLFTFNIF 257

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           I GLC+   +  A+ +L+ +I     PD   ++T++  +  +    EA K   KL+   +
Sbjct: 258 IQGLCRKGMLSGAMSMLDSVIREGLTPDVVTYNTLICGLCKNSNVVEAEKYLHKLVNGGL 317

Query: 569 FEKGTT 574
              G T
Sbjct: 318 EPDGFT 323



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 61/253 (24%), Positives = 112/253 (44%), Gaps = 39/253 (15%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C + K+    ++++ M      PD     +++ GL +  + E   +  
Sbjct: 460 DVFTFNTLIDGYCKQLKMETTIQILNKMWSHGVTPDVITYNSVLNGLSKAVKNEDLMETF 519

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV  G VP+ ITYN++   LCK G++  A+ L+DE+   G  PD +++ TI+    +N
Sbjct: 520 ETMVEKGCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANN 579

Query: 236 GKFKQAIGFWK---DQLR---------------------------------KGCPPYLIT 259
           G  K A   ++   +Q +                                  GC P   T
Sbjct: 580 GDLKGAYQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYT 639

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           Y ++I+  C         + L +M  +G  P + T+  ++N  C Q +  +AV +I+ ++
Sbjct: 640 YRVMIDGFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMV 699

Query: 320 SRGMEP---NSIT 329
             G+ P   NSI+
Sbjct: 700 HNGIVPEVVNSIS 712



 Score = 72.0 bits (175), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 103/243 (42%), Gaps = 13/243 (5%)

Query: 58  CRGLPGNVCIDRVNEVDQDEWSS--ESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVEN 115
           C+ L     I  +N++    WS      V+  N  L GL+   K+ D  L  +    VE 
Sbjct: 472 CKQLKMETTIQILNKM----WSHGVTPDVITYNSVLNGLSKAVKNED--LMETFETMVEK 525

Query: 116 ----DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
               ++ T N + ++ C  GK+ +A  L+D +  +   PD      +I G      ++ A
Sbjct: 526 GCVPNKITYNILTESLCKAGKVNEALDLVDEILNKGITPDTVSFATIISGFANNGDLKGA 585

Query: 172 SKVLQIMVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
            ++ + M     V  T  TYN+M+    ++  +     L  EM   GC PD  TY  ++ 
Sbjct: 586 YQLFRRMGEQYKVSHTTATYNIMINAFAEKLDLHMGEKLFLEMGAGGCAPDTYTYRVMID 645

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                G       F  + + KG  P L T+  +I  +C Q  +  A++++  M   G  P
Sbjct: 646 GFCITGNTDSGYKFLLEMIEKGFIPSLTTFGRVINCLCVQHRVHEAVDIIHFMVHNGIVP 705

Query: 291 DIV 293
           ++V
Sbjct: 706 EVV 708


>gi|168047804|ref|XP_001776359.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162672319|gb|EDQ58858.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 499

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 124/407 (30%), Positives = 216/407 (53%), Gaps = 5/407 (1%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +LI   ++    +KA  V ++M  SG  PDT T+N+++    K  ++ S   L +EM   
Sbjct: 94  SLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQ 153

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
            C P+VITY+ ++  +   G  ++A+  + D   +GC P + TYT +I+ + K   + +A
Sbjct: 154 NCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKA 213

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             + ++M  EG     V YNSL++   + G+ D A  +   +LS+G++P+ +T+ +L++ 
Sbjct: 214 FFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAAAKLFREMLSKGLQPDHVTFTSLVYG 273

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           LG  G      +I     +   +  V  YN+LI+ LCK   +D A   F ++      PD
Sbjct: 274 LGVAGRASEARRIFQEARDVGCALDVNLYNVLIDTLCKSKRLDEAWEIFGELEEDGLVPD 333

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           + T+N ++  LCK G +++A  LL  +  + C+P +  YNTLIDGL K G +E+A  L  
Sbjct: 334 VYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPDVTVYNTLIDGLRKSGRVEEAGQLLL 393

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M   G  PD +T+ TLI   C+  ++E+A+ L +EI  +G       Y  +++GLC + 
Sbjct: 394 EMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFEEISAKGFA-NTVTYNTILNGLCMAG 452

Query: 517 KVDMAIQVLELM----ISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +VD A ++   M    +     PD   ++T++      G++E A  L
Sbjct: 453 RVDEAYKLFNGMKQETVDGVIDPDFVTYTTLLNGARQAGLSELANSL 499



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/422 (26%), Positives = 207/422 (49%)

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           +  +R  +P    C  L+  L    R  +A +VL  +  S  +     +  +  G    G
Sbjct: 9   VRTQRGGVPSVRACTTLVEMLGIARRFNEAEEVLAEVEKSRYILQPRIFIELARGYASAG 68

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
            +  ++  L  M    C      YN+++      G  ++A+  ++   + G  P   T+ 
Sbjct: 69  LLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAVYRVMGQSGLRPDTYTFN 128

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           +L+    K   +    ++ ++M  + CSP+++TY+ L++  CK G  + A+ V  ++ SR
Sbjct: 129 VLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVFLDMKSR 188

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G  PN  TY +++  LG  G  D    + + M       T   YN LI+GL + G  D A
Sbjct: 189 GCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRSGRADAA 248

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
              F +M+SK  QPD VT+ +++  L   G  +EA ++        C+  +  YN LID 
Sbjct: 249 AKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLYNVLIDT 308

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L K   +++A  ++G++ E+G+ PD  T   L+ G C++ ++ +A  LL ++ + G    
Sbjct: 309 LCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKRAGCTPD 368

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            + Y  +I GL KS +V+ A Q+L  M S  Y+PD   ++T++ +    G  E+A +L++
Sbjct: 369 VTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIEDALRLFE 428

Query: 562 KL 563
           ++
Sbjct: 429 EI 430



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 112/378 (29%), Positives = 184/378 (48%), Gaps = 5/378 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  F    ++    KL + M  +N  P+      LI  + +   +EKA KV 
Sbjct: 123 DTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCKCGGVEKALKVF 182

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+  TY  M+ GL K G +  A  L +EM+  G     + YN+++  +  +
Sbjct: 183 LDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVVYNSLIHGLGRS 242

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   A   +++ L KG  P  +T+T L+  +      + A  +  +    GC+ D+  Y
Sbjct: 243 GRADAAAKLFREMLSKGLQPDHVTFTSLVYGLGVAGRASEARRIFQEARDVGCALDVNLY 302

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  CK  + D+A  +   L   G+ P+  T+N L+  L   G       +L  M  
Sbjct: 303 NVLIDTLCKSKRLDEAWEIFGELEEDGLVPDVYTFNALMDGLCKSGRIHDAFILLGDMKR 362

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A  +P V  YN LI+GL K G V+ A     +M S   +PD+VTYNT++   CK G + +
Sbjct: 363 AGCTPDVTVYNTLIDGLRKSGRVEEAGQLLLEMQSLGYEPDVVTYNTLIDESCKGGRIED 422

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM----MENGISPDDITHR 471
           AL+L   ++    +   +TYNT+++GL   G +++A  L+  M    ++  I PD +T+ 
Sbjct: 423 ALRLFEEISAKGFANT-VTYNTILNGLCMAGRVDEAYKLFNGMKQETVDGVIDPDFVTYT 481

Query: 472 TLIWGFCRADQVEEAVDL 489
           TL+ G  +A   E A  L
Sbjct: 482 TLLNGARQAGLSELANSL 499



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/205 (25%), Positives = 97/205 (47%), Gaps = 2/205 (0%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P +F    L  G    GL+++++ +  +M    C      YN+++ A  K G   +AL +
Sbjct: 54  PRIFIE--LARGYASAGLLEKSVEALKRMEGHRCALTASAYNSLIDAFVKAGYTQKALAV 111

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
             ++  S   P   T+N L++   K   ++    L+ +M     SP+ IT+  LI   C+
Sbjct: 112 YRVMGQSGLRPDTYTFNVLMNAFKKAKRVDSVWKLFEEMQNQNCSPNVITYSILIDAVCK 171

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              VE+A+ +  ++  RG +     Y  +I GL KS  VD A  + E M S        V
Sbjct: 172 CGGVEKALKVFLDMKSRGCRPNIFTYTSMIDGLGKSGHVDKAFFLFEEMTSEGLVATRVV 231

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLI 564
           +++++  +   G  + A KL+++++
Sbjct: 232 YNSLIHGLGRSGRADAAAKLFREML 256


>gi|357443403|ref|XP_003591979.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355481027|gb|AES62230.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 873

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 221/450 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C R +LT    L+  M      P+ +    L+ G  ++  +++A++V+
Sbjct: 245 DNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLFPNRNTYNILVHGYCKLKWLKEAAEVI 304

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M   G +PD  TYN MV GLC  G+I  A+ L D+M      PDV+TYNT++   F++
Sbjct: 305 ELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRLRDKMESFKLVPDVVTYNTLIDGCFEH 364

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A    ++   +G     +T+ I+I+  C +  I  A  V+  M   G SPD  TY
Sbjct: 365 RGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCTEGKIDEASNVMVKMVESGFSPDCFTY 424

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++N  CK GK  +A  +++ +  +G++ ++ T NTLLH++      D    +     +
Sbjct: 425 NTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTMCLEKQLDDAYTLTMKARK 484

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             +     TY  LI G  K    DRA+  + +M        I+TYNT++  LC  G  ++
Sbjct: 485 RGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATIITYNTIIRGLCLSGKTDQ 544

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+  L+ L      P   T N +I G   +G +EKA   + +M+E+ + PD  T   L+ 
Sbjct: 545 AVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVEKAFQFHNKMVEHSLKPDIFTCNILLR 604

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G CR   +E+ + L      +G  M    Y ++I   CK ++++ A  ++  M     +P
Sbjct: 605 GLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFCKERRLEDAFDLMTEMEGKNLEP 664

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   ++ IV  +   G TEEA KL  K  E
Sbjct: 665 DRYTYNAIVTGLTKAGRTEEAEKLALKFAE 694



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/431 (28%), Positives = 208/431 (48%), Gaps = 3/431 (0%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK---ASKVLQIMVMSGGVPDTITYNMMV 194
           ++ + M R    P+   C  L+  L+R +       + +V Q  V  G  P+  T+N+++
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            G C       A+ L+++M   GC PD +TYNT+L  +    +  Q           G  
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P   TY IL+   CK   +  A EV++ M  +G  PD+ TYN++V   C +GK D+AV +
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
            + + S  + P+ +TYNTL+         DA  K+++ M          T+NI+I   C 
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVTHNIMIKWFCT 398

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G +D A N   +MV     PD  TYNT++   CK G + EA +++  +          T
Sbjct: 399 EGKIDEASNVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFT 458

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
            NTL+  +  +  ++ A  L  +  + G   D++T+ TLI G+ + +Q + A+ L +E+ 
Sbjct: 459 LNTLLHTMCLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMK 518

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           + G       Y  +I GLC S K D A+  L  ++     PD++  + I+     +G  E
Sbjct: 519 ETGIVATIITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGYCWEGAVE 578

Query: 555 EAYKLWQKLIE 565
           +A++   K++E
Sbjct: 579 KAFQFHNKMVE 589



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/434 (29%), Positives = 205/434 (47%), Gaps = 54/434 (12%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T+N +++ FC+ GK                                   I++AS
Sbjct: 382 VKENGVTHNIMIKWFCTEGK-----------------------------------IDEAS 406

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V+  MV SG  PD  TYN M+ G CK G++  A  ++DEM   G + D  T NT+L TM
Sbjct: 407 NVMVKMVESGFSPDCFTYNTMINGYCKAGKMAEAYKMMDEMGRKGLKLDTFTLNTLLHTM 466

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +   A        ++G     +TY  LI    K     RA+++ ++M   G    I
Sbjct: 467 CLEKQLDDAYTLTMKARKRGYILDEVTYGTLIMGYFKDEQADRALKLWEEMKETGIVATI 526

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILD 351
           +TYN+++   C  GK D AV  +N LL +G+ P+  T N ++H      CW+ AV+K   
Sbjct: 527 ITYNTIIRGLCLSGKTDQAVDKLNELLEKGLVPDESTSNIIIHGY----CWEGAVEKAFQ 582

Query: 352 IMN---EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
             N   E S  P +FT NIL+ GLC+ G++++ +  FN  +SK    D VTYN ++ + C
Sbjct: 583 FHNKMVEHSLKPDIFTCNILLRGLCREGMLEKGLTLFNTWISKGKPMDTVTYNIIISSFC 642

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG------ 462
           KE  L +A  L+  + G +  P   TYN ++ GL K G  E+A  L  +  E G      
Sbjct: 643 KERRLEDAFDLMTEMEGKNLEPDRYTYNAIVTGLTKAGRTEEAEKLALKFAEKGQQVKTQ 702

Query: 463 -ISPD----DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
             SP+    D+ +   I   C   + ++A+ L ++  ++G  +    Y  ++ GL K +K
Sbjct: 703 DTSPELGTSDMMYSEQISSLCTQGKYKDAMKLFQQAEQKGVSLNKYTYIKLMDGLLKRRK 762

Query: 518 VDMAIQVLELMISS 531
                 +L  M+S+
Sbjct: 763 SFTTTSLLPFMVSA 776



 Score = 98.6 bits (244), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 59/230 (25%), Positives = 115/230 (50%), Gaps = 3/230 (1%)

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS---FNQMVSKNCQPDIVTYNTVL 404
           +I + M      P + T N L+N L +       + S   F   V    QP++ T+N ++
Sbjct: 159 QIFNKMKRLRFRPNLLTCNTLLNALVRSNSSHSLVFSREVFQDAVKLGVQPNVNTFNILI 218

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
              C +    EAL+L++ +    C P  +TYNT++  L K+  + +   L  QM  +G+ 
Sbjct: 219 HGYCSDNNTEEALRLINQMGEYGCCPDNVTYNTVLTALCKRSQLTQVRDLLLQMKNSGLF 278

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P+  T+  L+ G+C+   ++EA ++++ +  +G       Y  ++ GLC   K+D A+++
Sbjct: 279 PNRNTYNILVHGYCKLKWLKEAAEVIELMTGKGMLPDVWTYNTMVRGLCDEGKIDEAVRL 338

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            + M S +  PD   ++T++    +   ++ A+KL +++    V E G T
Sbjct: 339 RDKMESFKLVPDVVTYNTLIDGCFEHRGSDAAFKLVEEMKARGVKENGVT 388


>gi|242062032|ref|XP_002452305.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
 gi|241932136|gb|EES05281.1| hypothetical protein SORBIDRAFT_04g023380 [Sorghum bicolor]
          Length = 347

 Score =  221 bits (564), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 117/330 (35%), Positives = 188/330 (56%), Gaps = 35/330 (10%)

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           +++LD+M  +GC+PDI+TYN ++N  C++G+ DDA+  + NL S G EPN+++YN +L  
Sbjct: 1   MKLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKG 60

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ--------- 387
           L +   W+  +K+++ M      P V T+N+LI+ LC+ GLV+ A+    Q         
Sbjct: 61  LFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPN 120

Query: 388 --------------------------MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
                                     MVS+ C PDIV+YNT+L ALC+ G ++ A+ LLH
Sbjct: 121 SLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLH 180

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L G  CSP LI+YNT+IDGL K G  ++A+ L  +M+  G+ PD IT+ T+  G CR D
Sbjct: 181 QLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCRED 240

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++EEA+    ++   G +     Y  ++ GLCK ++   AI +   MIS+   P+++ ++
Sbjct: 241 KIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYT 300

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
            +V+ +A +G+ +EA  L  +L    V  K
Sbjct: 301 ILVEGLAYEGLVKEARDLLGQLCSRGVVNK 330



 Score =  218 bits (556), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 113/340 (33%), Positives = 196/340 (57%), Gaps = 4/340 (1%)

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L  M   G  PD ITYN+++ G+C+ G++  A+  L+ +   G EP+ ++YN +L+ +
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F   +++ A    ++   KGCPP ++T+ +LI  +C++  +  A+EVL+ +   GC+P+ 
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           ++YN L++  CKQ K D A+  +  ++SRG  P+ ++YNTLL +L   G  D    +L  
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +     SP + +YN +I+GL K G    A+   ++M+SK  QPDI+TY T+   LC+E  
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDK 241

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA++    +      P ++ YN ++ GL K+     A+ L+  M+ NG  P++ T+  
Sbjct: 242 IEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTI 301

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG--NK--MRNSAYRLV 508
           L+ G      V+EA DLL ++  RG  NK  M+  A +++
Sbjct: 302 LVEGLAYEGLVKEARDLLGQLCSRGVVNKKFMKKGAVKML 341



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 98/326 (30%), Positives = 176/326 (53%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           KL+D M  +   PD      ++ G+ +  R++ A + L+ +   GG P+T++YN+++ GL
Sbjct: 2   KLLDEMRDKGCAPDIITYNVVLNGICQEGRVDDAMEFLENLPSYGGEPNTVSYNIVLKGL 61

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
               +   A  L++EM+  GC P+V+T+N ++  +   G  + A+   +   + GC P  
Sbjct: 62  FTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLCRRGLVEPAMEVLEQIPKYGCTPNS 121

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           ++Y  L+   CKQ  + +A+  ++ M   GC PDIV+YN+L+   C+ G+ D A+ +++ 
Sbjct: 122 LSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQ 181

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           L  +G  P  I+YNT++  L   G      ++LD M      P + TY  + +GLC+   
Sbjct: 182 LKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDK 241

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           ++ AI +F ++     +P +V YN +L  LCK    + A+ L   +  + C P   TY  
Sbjct: 242 IEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTI 301

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGI 463
           L++GLA +G +++A  L GQ+   G+
Sbjct: 302 LVEGLAYEGLVKEARDLLGQLCSRGV 327



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 89/289 (30%), Positives = 150/289 (51%), Gaps = 5/289 (1%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           +LPS  G   E +  + N +L+   +  +  DA KL++ MA +   P+      LI  L 
Sbjct: 41  NLPSYGG---EPNTVSYNIVLKGLFTAERWEDAEKLMEEMAHKGCPPNVVTFNMLISFLC 97

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           R   +E A +VL+ +   G  P++++YN ++   CK+ ++  A+A ++ M   GC PD++
Sbjct: 98  RRGLVEPAMEVLEQIPKYGCTPNSLSYNPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIV 157

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           +YNT+L  +  NG+   AI        KGC P LI+Y  +I+ + K      A+E+LD+M
Sbjct: 158 SYNTLLTALCRNGEVDVAIDLLHQLKGKGCSPVLISYNTVIDGLTKAGKTKEALELLDEM 217

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGC 342
             +G  PDI+TY ++ +  C++ K ++A+     +   G+ P  + YN +L  L   R  
Sbjct: 218 ISKGLQPDIITYTTIASGLCREDKIEEAIRTFCKVQDMGIRPTVVLYNAILLGLCKRRET 277

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            +A+D +   M      P   TY IL+ GL   GLV  A +   Q+ S+
Sbjct: 278 HNAID-LFSYMISNGCMPNESTYTILVEGLAYEGLVKEARDLLGQLCSR 325



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/203 (30%), Positives = 99/203 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L  FC + K+  A   +++M  R   PD      L+  L R   ++ A  +L  +  
Sbjct: 125 NPLLHAFCKQKKMDKAMAFVELMVSRGCYPDIVSYNTLLTALCRNGEVDVAIDLLHQLKG 184

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  I+YN ++ GL K G+ + A+ LLDEM   G +PD+ITY TI   +    K ++
Sbjct: 185 KGCSPVLISYNTVIDGLTKAGKTKEALELLDEMISKGLQPDIITYTTIASGLCREDKIEE 244

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI  +      G  P ++ Y  ++  +CK+     AI++   M   GC P+  TY  LV 
Sbjct: 245 AIRTFCKVQDMGIRPTVVLYNAILLGLCKRRETHNAIDLFSYMISNGCMPNESTYTILVE 304

Query: 301 FSCKQGKYDDAVLVINNLLSRGM 323
               +G   +A  ++  L SRG+
Sbjct: 305 GLAYEGLVKEARDLLGQLCSRGV 327


>gi|168014206|ref|XP_001759643.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162689182|gb|EDQ75555.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 1043

 Score =  221 bits (563), Expect = 7e-55,   Method: Compositional matrix adjust.
 Identities = 118/408 (28%), Positives = 224/408 (54%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+   I    +++A K+L++M     +P  +TY  +V GL K G++  A++LL EM   G
Sbjct: 534 LMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQG 593

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           CEP V+TY++++ + +   + ++++  + + +RKGC   + TY+++I  +CK   + +A+
Sbjct: 594 CEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQAL 653

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +V   M  EG  P +  Y +L++   K  K D A+ + N L    + P++  YN +++ L
Sbjct: 654 DVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGL 713

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                 D   K++D M   +  P +FTY  L++GL K G ++ A N F +M  +  +PD+
Sbjct: 714 VKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDV 773

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V Y +++  L K G L+ AL +   +    C P ++TY++LID L K+G +E+A   +  
Sbjct: 774 VAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFEN 833

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
            +  G +P+   + +LI  F +   V+ A++L +E+ +R        Y  ++ GL K+ +
Sbjct: 834 SISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGR 893

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +++A ++LE M      PD   ++ ++  V   GM +EA   ++++ E
Sbjct: 894 LNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKE 941



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 220/452 (48%), Gaps = 11/452 (2%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E T N ++  F   G + +A KL+++M +   IP       L+ GL +  R+++A  +L+
Sbjct: 528 EITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLR 587

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M   G  P  +TY+ ++    KR Q   +++L DEM   GC  DV TY+ ++  +  + 
Sbjct: 588 EMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSD 647

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
              QA+  +     +G  P L  Y  L+  + K   I  A+++ +++      PD   YN
Sbjct: 648 DVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYN 707

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            +VN   K  + D+A  +++++ ++ + P+  TY +LL  LG  G  +    +   M E 
Sbjct: 708 IMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEE 767

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            H P V  Y  L++ L K G +  A+  F  M  K C PD+VTY++++ +L KEG + EA
Sbjct: 768 GHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEA 827

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
                      C+P +  Y++LID   KKG +++A+ L+ +M      P+ +T+  L+ G
Sbjct: 828 YYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSG 887

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             +A ++  A  LL+E+ K G       Y ++I G+ K   VD A    + M      PD
Sbjct: 888 LAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPD 947

Query: 537 DTVFSTIVKKVAD-----------DGMTEEAY 557
              F+++++ +             D M EE Y
Sbjct: 948 VITFTSLIESLGKVDKLLEACELFDSMEEEGY 979



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 222/447 (49%), Gaps = 4/447 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D +T    + +F   G+L  A++ I  M +    P  H    LI  L++   I++A 
Sbjct: 283 IQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEAC 342

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K    M      P+ +TY  +V GL K G++  A  +  EM  + C PD I YNT++  +
Sbjct: 343 KFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGL 402

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A G +K+   +G  P L TY I+I  + K      A ++  D+  +G  PD+
Sbjct: 403 GKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDV 462

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN+L++   K G+ D  + +I  ++ +G E   I+ ++   + G  G  +  D+ ++ 
Sbjct: 463 FTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGEC-IISRDS---NAGHEGTIEGADRTVEY 518

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
            +    S    TYN L++     G VD A+     M    C P +VTY T++  L K G 
Sbjct: 519 PSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGR 578

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EA+ LL  +    C P ++TY++L+    K+   E+++ L+ +M+  G   D  T+  
Sbjct: 579 LDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSL 638

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I   C++D V++A+D+   + + G +     Y+ ++  L K +K+D A+Q+   +  S 
Sbjct: 639 VINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESS 698

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKL 559
             PD  V++ +V  +      +EA KL
Sbjct: 699 LVPDTFVYNIMVNGLVKSNRVDEACKL 725



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 103/347 (29%), Positives = 190/347 (54%)

Query: 123  ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            +L +     K+  A ++ + +   + +PD      ++ GL++ +R+++A K++  M    
Sbjct: 674  LLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQN 733

Query: 183  GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             +PD  TY  ++ GL K G++  A  +  +M+  G EPDV+ Y +++  +   GK   A+
Sbjct: 734  ILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHAL 793

Query: 243  GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++   +K C P ++TY+ LI+ + K+  +  A    ++   +GC+P++  Y+SL++  
Sbjct: 794  IIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSF 853

Query: 303  CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
             K+G  D A+ +   +  R   PN +TYN LL  L   G  +  +K+L+ M +    P +
Sbjct: 854  GKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDL 913

Query: 363  FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             TYNILI+G+ K G+VD A + F +M  K   PD++T+ +++ +L K   L EA +L   
Sbjct: 914  VTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDS 973

Query: 423  LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            +     +P ++TYN LID L + G + +A +++ +M   G  PD IT
Sbjct: 974  MEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGIT 1020



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/418 (29%), Positives = 201/418 (48%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T + ++ +F  R +  ++  L D M R+  + D      +I  L + D +++A  V   M
Sbjct: 600  TYSSLMASFYKRDQEEESLSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRM 659

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
               G  P    Y  ++  L K  +I  A+ + +E+  S   PD   YN ++  +  + + 
Sbjct: 660  KEEGMEPLLGNYKTLLSSLVKDEKIDFALQIFNELQESSLVPDTFVYNIMVNGLVKSNRV 719

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             +A         +   P L TYT L++ + K   +  A  +   M  EG  PD+V Y SL
Sbjct: 720  DEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTEEGHEPDVVAYTSL 779

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            ++   K GK   A+++   +  +   P+ +TY++L+ SLG  G  +      +       
Sbjct: 780  MDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEEAYYFFENSISKGC 839

Query: 359  SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            +P V  Y+ LI+   K G+VDRA+  F +M  + C P+IVTYN +L  L K G LN A +
Sbjct: 840  TPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEK 899

Query: 419  LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            LL  +    C P L+TYN LIDG+ K G +++A   + +M E GI PD IT  +LI    
Sbjct: 900  LLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVPDVITFTSLIESLG 959

Query: 479  RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            + D++ EA +L   + + G       Y ++I  L ++ KV  A  +   M      PD
Sbjct: 960  KVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIFHEMKVKGCMPD 1017



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 111/382 (29%), Positives = 193/382 (50%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T + ++   C    +  A  +   M      P       L+  L++ ++I+ A ++ 
Sbjct: 632  DVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSSLVKDEKIDFALQIF 691

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              +  S  VPDT  YN+MV GL K  ++  A  L+D M      PD+ TY ++L  +  +
Sbjct: 692  NELQESSLVPDTFVYNIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKS 751

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            G+ ++A   +     +G  P ++ YT L++ + K   ++ A+ +   MA + C PD+VTY
Sbjct: 752  GRLEEAFNMFTKMTEEGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTY 811

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +SL++   K+G+ ++A     N +S+G  PN   Y++L+ S G +G  D   ++ + M  
Sbjct: 812  SSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQR 871

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                P + TYN L++GL K G ++ A     +M    C PD+VTYN ++  + K GM++E
Sbjct: 872  RQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDE 931

Query: 416  ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            A      +      P +IT+ +LI+ L K   + +A  L+  M E G +P  +T+  LI 
Sbjct: 932  AESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLID 991

Query: 476  GFCRADQVEEAVDLLKEIGKRG 497
               RA +V EA  +  E+  +G
Sbjct: 992  ILGRAGKVHEAAMIFHEMKVKG 1013



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 163/314 (51%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++       ++ +A KL+D M  +N +PD     +L+ GL +  R+E+A  +   M  
Sbjct: 707  NIMVNGLVKSNRVDEACKLVDSMKNQNILPDLFTYTSLLDGLGKSGRLEEAFNMFTKMTE 766

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
             G  PD + Y  ++  L K G++  A+ +   M+   C PDV+TY++++ ++   G+ ++
Sbjct: 767  EGHEPDVVAYTSLMDVLGKGGKLSHALIIFRAMAKKRCVPDVVTYSSLIDSLGKEGRVEE 826

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A  F+++ + KGC P +  Y+ LI+   K+  + RA+E+ ++M    C P+IVTYN+L++
Sbjct: 827  AYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELFEEMQRRQCPPNIVTYNNLLS 886

Query: 301  FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               K G+ + A  ++  +   G  P+ +TYN L+  +G  G  D  +     M E    P
Sbjct: 887  GLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKMGMVDEAESYFKRMKEKGIVP 946

Query: 361  TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             V T+  LI  L K   +  A   F+ M  +   P +VTYN ++  L + G ++EA  + 
Sbjct: 947  DVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTYNVLIDILGRAGKVHEAAMIF 1006

Query: 421  HLLNGSSCSPCLIT 434
            H +    C P  IT
Sbjct: 1007 HEMKVKGCMPDGIT 1020



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 129/499 (25%), Positives = 218/499 (43%), Gaps = 67/499 (13%)

Query: 134 TDAS-KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           TDA  +++  M +       H   +L+R     + +  A ++   M   G  P T  YN 
Sbjct: 198 TDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQMKSFGCNPSTNMYNF 257

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++  L K G   SA+ +  ++     +PD  T+   + +   +G+   A    ++ ++ G
Sbjct: 258 VLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRLDPAAEPIQEMIKSG 317

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P + T+T+LI+ + K   I  A +  + M    CSP++VTY +LVN   K G+ ++A 
Sbjct: 318 IDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTLVNGLAKAGRLEEAC 377

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            V   +      P++I YNTL+  LG  G  D    +   M +    P + TYNI+I+ L
Sbjct: 378 EVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGLVPNLRTYNIMISVL 437

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSC-- 428
            K G    A   F+ +  +   PD+ TYNT++  L K G +++ L ++  +   G  C  
Sbjct: 438 GKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLAIIKEMVEKGGECII 497

Query: 429 --------------------SPCL-------ITYN------------------------- 436
                                P L       ITYN                         
Sbjct: 498 SRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGHVDEAVKLLEVMKKH 557

Query: 437 ----------TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
                     TL+DGL K G +++A+ L  +M + G  P  +T+ +L+  F + DQ EE+
Sbjct: 558 ECIPTVVTYTTLVDGLGKAGRLDEAVSLLREMEKQGCEPSVVTYSSLMASFYKRDQEEES 617

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + L  E+ ++G     S Y LVI+ LCKS  VD A+ V   M     +P    + T++  
Sbjct: 618 LSLFDEMVRKGCVADVSTYSLVINCLCKSDDVDQALDVFGRMKEEGMEPLLGNYKTLLSS 677

Query: 547 VADDGMTEEAYKLWQKLIE 565
           +  D   + A +++ +L E
Sbjct: 678 LVKDEKIDFALQIFNELQE 696



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 170/406 (41%), Gaps = 31/406 (7%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TY +M+  L    +  + + +L  M   G    +    ++LRT         A+  +   
Sbjct: 184 TYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGSTNNVSGALEIFNQM 243

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
              GC P    Y  ++E + K      A+ V   +      PD  T+   V+   + G+ 
Sbjct: 244 KSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQTFRIFVHSFNRSGRL 303

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           D A   I  ++  G++P   T+  L+ +L   G  D   K  + M     SP V TY  L
Sbjct: 304 DPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMKNLRCSPNVVTYTTL 363

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           +NGL K G ++ A   F +M   NC PD + YNT++  L K G  + A  L   +     
Sbjct: 364 VNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEADMACGLFKEMKDRGL 423

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P L TYN +I  L K G   +A  L+  + E G  PD  T+ TLI    +  Q+++ + 
Sbjct: 424 VPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLIDVLGKGGQMDKVLA 483

Query: 489 LLKEIGKRGNK---MRNS----------------------------AYRLVIHGLCKSKK 517
           ++KE+ ++G +    R+S                             Y  ++     +  
Sbjct: 484 IIKEMVEKGGECIISRDSNAGHEGTIEGADRTVEYPSLGFKSLGEITYNTLMSAFIHNGH 543

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           VD A+++LE+M      P    ++T+V  +   G  +EA  L +++
Sbjct: 544 VDEAVKLLEVMKKHECIPTVVTYTTLVDGLGKAGRLDEAVSLLREM 589



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 81/321 (25%), Positives = 152/321 (47%), Gaps = 1/321 (0%)

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           W  Q + G    + TYT++I+++         +++L  M  EG    +    SL+     
Sbjct: 171 WAGQ-QDGYSHTVGTYTLMIKRLAGAQETDAVVQILTAMWKEGHRISMHLLTSLLRTFGS 229

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
                 A+ + N + S G  P++  YN +L  L   G + +   +   + +    P   T
Sbjct: 230 TNNVSGALEIFNQMKSFGCNPSTNMYNFVLELLVKGGFYHSAVIVFGKLGQFRIQPDAQT 289

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           + I ++   + G +D A     +M+     P + T+  ++ AL K G ++EA +  + + 
Sbjct: 290 FRIFVHSFNRSGRLDPAAEPIQEMIKSGIDPGVHTFTVLIDALVKSGNIDEACKFFNGMK 349

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
              CSP ++TY TL++GLAK G +E+A  ++ +M EN  SPD I + TLI G  +A + +
Sbjct: 350 NLRCSPNVVTYTTLVNGLAKAGRLEEACEVFVEMKENNCSPDAIAYNTLIDGLGKAGEAD 409

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            A  L KE+  RG       Y ++I  L K+ +   A Q+   +      PD   ++T++
Sbjct: 410 MACGLFKEMKDRGLVPNLRTYNIMISVLGKAGRQPEAWQLFHDLKEQGAVPDVFTYNTLI 469

Query: 545 KKVADDGMTEEAYKLWQKLIE 565
             +   G  ++   + ++++E
Sbjct: 470 DVLGKGGQMDKVLAIIKEMVE 490



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 114/225 (50%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T + ++ +    G++ +A    +    +   P+     +LI    +   +++A ++ 
Sbjct: 807  DVVTYSSLIDSLGKEGRVEEAYYFFENSISKGCTPNVGVYSSLIDSFGKKGMVDRALELF 866

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            + M      P+ +TYN ++ GL K G++  A  LL+EM   GC PD++TYN ++  +   
Sbjct: 867  EEMQRRQCPPNIVTYNNLLSGLAKAGRLNVAEKLLEEMEKVGCVPDLVTYNILIDGVGKM 926

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            G   +A  ++K    KG  P +IT+T LIE + K   +  A E+ D M  EG +P +VTY
Sbjct: 927  GMVDEAESYFKRMKEKGIVPDVITFTSLIESLGKVDKLLEACELFDSMEEEGYNPSVVTY 986

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
            N L++   + GK  +A ++ + +  +G  P+ IT   +   L  R
Sbjct: 987  NVLIDILGRAGKVHEAAMIFHEMKVKGCMPDGITIGIMKRILSVR 1031


>gi|242046334|ref|XP_002461038.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
 gi|241924415|gb|EER97559.1| hypothetical protein SORBIDRAFT_02g039560 [Sorghum bicolor]
          Length = 595

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 144/485 (29%), Positives = 245/485 (50%), Gaps = 15/485 (3%)

Query: 87  VNKKLRGLTITKK-SHDPSLPSSDGPFVENDEKTNNKILQNFCSRG--KLTDASKLIDIM 143
           +N++LRG  +T+  S   +LP         D  + N +L   C RG   L  A  L+  M
Sbjct: 58  LNRRLRGAPVTEACSLLSALPDV------RDAVSYNTVLAALCRRGGDHLRQARSLLVDM 111

Query: 144 ARRNQI---PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           +R       P+      ++RGL    R  +A  +L+ M  SG   D +TY  ++ GLC  
Sbjct: 112 SREAHPAARPNAVSYTTVMRGLCASRRTGEAVALLRSMQASGVRADVVTYGTLIRGLCDA 171

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
            ++ +A+ LLDEM  SG +P+V+ Y+ +LR    +G+++     ++D  R+G  P +I +
Sbjct: 172 SELDAALELLDEMCGSGVQPNVVVYSCLLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMF 231

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           T LI+ +CK+    +A +V D M   G  P++VTYN L+N  CK+G   +A+ +   +  
Sbjct: 232 TGLIDDLCKEGKTGKAAKVKDMMVQRGLEPNVVTYNVLINSLCKEGSVREALTLRKEMDD 291

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILD--IMNEASHSPTVFTYNILINGLCKYGLV 378
           +G+ P+ +TYNTL+  L      D     L+  I  +    P V T+N +I+GLCK G +
Sbjct: 292 KGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRM 351

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
            +A+     M  + C  ++VTYN ++G   +   +  A+ L+  L  S   P   TY+ L
Sbjct: 352 TQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYSIL 411

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I+G +K   +++A      M + GI  +   +  L+   C+   +E A+ L  E+ K   
Sbjct: 412 INGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMDKNCG 471

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
            +   AY  +IHG CKS  +    Q+++ M+     PD   +S ++   A  G  EEA +
Sbjct: 472 -LDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEAER 530

Query: 559 LWQKL 563
           + +++
Sbjct: 531 VLKQM 535



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 115/373 (30%), Positives = 200/373 (53%), Gaps = 3/373 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L+ +C  G+  D  K+ + M+RR   PD      LI  L +  +  KA+KV  +MV  G
Sbjct: 199 LLRGYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRG 258

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TYN+++  LCK G +R A+ L  EM   G  PDV+TYNT++  +    +  +A+
Sbjct: 259 LEPNVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAM 318

Query: 243 GFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            F ++ ++      P ++T+  +I  +CK   + +A++V + MA  GC  ++VTYN L+ 
Sbjct: 319 SFLEEMIQGDTVVEPDVVTFNSVIHGLCKIGRMTQAVKVREMMAERGCMCNLVTYNYLIG 378

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +  K   A+ +++ L   G+EP+S TY+ L++        D  +K L  M +     
Sbjct: 379 GFLRVHKVKMAMNLMDELAISGLEPDSFTYSILINGFSKMWEVDRAEKFLCTMRQRGIKA 438

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +F Y  L+  +C+ G+++RA+  FN+M  KNC  D + Y+T++   CK G +    QL+
Sbjct: 439 ELFHYIPLLAAMCQQGMMERAMGLFNEM-DKNCGLDAIAYSTMIHGACKSGDMKTVKQLI 497

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +     +P  +TY+ LI+  AK G +E+A  +  QM  +G  PD     +LI G+   
Sbjct: 498 QDMLDEGLAPDAVTYSMLINMYAKLGDLEEAERVLKQMTASGFVPDVAVFDSLIKGYSAE 557

Query: 481 DQVEEAVDLLKEI 493
            Q ++ + L+ E+
Sbjct: 558 GQTDKVLKLIHEM 570



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 74/298 (24%), Positives = 153/298 (51%), Gaps = 3/298 (1%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRID 166
           D   V  D  T N ++       ++ +A   ++ M + + +  PD     ++I GL +I 
Sbjct: 290 DDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFLEEMIQGDTVVEPDVVTFNSVIHGLCKIG 349

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           R+ +A KV ++M   G + + +TYN ++GG  +  +++ A+ L+DE+++SG EPD  TY+
Sbjct: 350 RMTQAVKVREMMAERGCMCNLVTYNYLIGGFLRVHKVKMAMNLMDELAISGLEPDSFTYS 409

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++       +  +A  F     ++G    L  Y  L+  +C+Q  + RA+ + ++M  +
Sbjct: 410 ILINGFSKMWEVDRAEKFLCTMRQRGIKAELFHYIPLLAAMCQQGMMERAMGLFNEMD-K 468

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
            C  D + Y+++++ +CK G       +I ++L  G+ P+++TY+ L++     G  +  
Sbjct: 469 NCGLDAIAYSTMIHGACKSGDMKTVKQLIQDMLDEGLAPDAVTYSMLINMYAKLGDLEEA 528

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
           +++L  M  +   P V  ++ LI G    G  D+ +   ++M +KN   D    +T++
Sbjct: 529 ERVLKQMTASGFVPDVAVFDSLIKGYSAEGQTDKVLKLIHEMRAKNVAFDPKIISTII 586



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 117/245 (47%), Gaps = 5/245 (2%)

Query: 326 NSITYNTLLHSLGSRG---CWDAVDKILDIMNEA--SHSPTVFTYNILINGLCKYGLVDR 380
           ++++YNT+L +L  RG      A   ++D+  EA  +  P   +Y  ++ GLC       
Sbjct: 82  DAVSYNTVLAALCRRGGDHLRQARSLLVDMSREAHPAARPNAVSYTTVMRGLCASRRTGE 141

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+     M +   + D+VTY T++  LC    L+ AL+LL  + GS   P ++ Y+ L+ 
Sbjct: 142 AVALLRSMQASGVRADVVTYGTLIRGLCDASELDAALELLDEMCGSGVQPNVVVYSCLLR 201

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  + G  +    ++  M   GI PD I    LI   C+  +  +A  +   + +RG + 
Sbjct: 202 GYCRSGRWQDVGKVFEDMSRRGIKPDVIMFTGLIDDLCKEGKTGKAAKVKDMMVQRGLEP 261

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y ++I+ LCK   V  A+ + + M      PD   ++T++  ++     +EA    
Sbjct: 262 NVVTYNVLINSLCKEGSVREALTLRKEMDDKGVAPDVVTYNTLIAGLSGVLEMDEAMSFL 321

Query: 561 QKLIE 565
           +++I+
Sbjct: 322 EEMIQ 326


>gi|359475765|ref|XP_002273555.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 935

 Score =  221 bits (563), Expect = 8e-55,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 221/443 (49%), Gaps = 1/443 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +C    +  A +L+D M +RN +P       +I GL     +  A+K+L+ M  SG
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ + Y+ ++ G    G+I  A  LLD MS SG  PD+  YN I+  +   GK ++A 
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            +  +   +G  P  +T+   I    K   +  A +  D+M   G  P+   Y  L+N  
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K G   +A+ +  +L + G+ P+  T +  +H L   G      K+   + E    P V
Sbjct: 500 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 559

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FTY+ LI+G CK G V++A    ++M  K   P+I  YN ++  LCK G +  A +L   
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 619

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  +TY+T+IDG  K   + +A  L+ +M   G+ P    +  L+ G C+   
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 679

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E+A++L +E+ ++G     S +  +I G CKS K+  A Q+ + MI+ +  PD   ++T
Sbjct: 680 MEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 738

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++      G  EEA  L++++ E
Sbjct: 739 VIDWHCKAGKMEEANLLFKEMQE 761



 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 128/469 (27%), Positives = 234/469 (49%), Gaps = 5/469 (1%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  ++ D  T    +  +   GK+T+A+K  D M     +P+      LI G  +   + 
Sbjct: 447 GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 506

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A  + + +   G +PD  T +  + GL K G+++ A+ +  E+   G  PDV TY++++
Sbjct: 507 EALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 566

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                 G+ ++A     +   KG  P +  Y  L++ +CK   I RA ++ D M  +G  
Sbjct: 567 SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 626

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD VTY+++++  CK     +A  + + + S+G++P+S  YN L+H     G    ++K 
Sbjct: 627 PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG---DMEKA 683

Query: 350 LDIMNEASHS--PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +++  E       T  ++N LI+G CK   +  A   F +M++K   PD VTY TV+   
Sbjct: 684 MNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWH 743

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CK G + EA  L   +   +     +TY +L+ G  K G   +   L+ +M+  G+ PD+
Sbjct: 744 CKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 803

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+  +I+  C+ D + EA  L  E+  +G   + + + L+I  LCK + +  A ++L+ 
Sbjct: 804 VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 863

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
           M     KP     ST+V+   + G  +EA ++++ +    +    TTL+
Sbjct: 864 MGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLI 912



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/457 (26%), Positives = 224/457 (49%), Gaps = 3/457 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH-FCINLIRGLIRIDRIEKASKVLQI 177
           T N ++   C  GK+  A++++  M      P+   FC+ LI G  R   + +A ++L  
Sbjct: 281 TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL-LIEGYCREHNMGRALELLDE 339

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M     VP  ++Y  M+ GLC    +  A  LL++M+ SG +P+V+ Y+T++      G+
Sbjct: 340 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 399

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A          G  P +  Y  +I  + K   +  A   L ++   G  PD VT+ +
Sbjct: 400 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 459

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
            +    K GK  +A    + +L  G+ PN+  Y  L++     G       I   ++   
Sbjct: 460 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 519

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V T +  I+GL K G V  A+  F+++  K   PD+ TY++++   CK+G + +A 
Sbjct: 520 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 579

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L   +     +P +  YN L+DGL K G +++A  L+  M E G+ PD +T+ T+I G+
Sbjct: 580 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 639

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+++ V EA  L  E+  +G +  +  Y  ++HG CK   ++ A+ +   M+   +    
Sbjct: 640 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL 699

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           + F+T++         +EA +L+Q++I  ++     T
Sbjct: 700 S-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVT 735



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 205/434 (47%), Gaps = 1/434 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G L +A  +   +     +PD   C   I GL++  R+++A KV   +   G VPD  TY
Sbjct: 503 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 562

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           + ++ G CK+G++  A  L DEM + G  P++  YN ++  +  +G  ++A   +     
Sbjct: 563 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 622

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           KG  P  +TY+ +I+  CK   +A A  +  +M  +G  P    YN+LV+  CK+G  + 
Sbjct: 623 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 682

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ +   +L +G    ++++NTL+             ++   M      P   TY  +I+
Sbjct: 683 AMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 741

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
             CK G ++ A   F +M  +N   D VTY +++    K G  +E   L   +      P
Sbjct: 742 WHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKP 801

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             +TY  +I    K+  + +A  L  +++  G+      H  LI   C+ + + EA  LL
Sbjct: 802 DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 861

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+G+ G K   +A   ++    ++ K+D A +V E + S    PD T    +V    +D
Sbjct: 862 DEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLND 921

Query: 551 GMTEEAYKLWQKLI 564
             +E+A  L ++L+
Sbjct: 922 TDSEDARNLIKQLV 935



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 211/456 (46%), Gaps = 35/456 (7%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M  +  +P+ +    +  GL R  R+ +A    + M  +G  PD    + ++ G  + G 
Sbjct: 200 MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 259

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           I   + + D M   G   ++ITYN ++  +   GK ++A    K  +  GC P   T+ +
Sbjct: 260 IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 319

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LIE  C++  + RA+E+LD+M      P  V+Y +++N  C       A  ++  +   G
Sbjct: 320 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 379

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           ++PN + Y+TL+    S G  +   ++LD M+ +  +P +F YN +I+ L K G ++ A 
Sbjct: 380 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 439

Query: 383 NSFNQMVSKNCQPDIVT-----------------------------------YNTVLGAL 407
               ++  +  +PD VT                                   Y  ++   
Sbjct: 440 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 499

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            K G L EAL +   L+     P + T +  I GL K G +++A+ ++ ++ E G+ PD 
Sbjct: 500 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 559

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T+ +LI GFC+  +VE+A +L  E+  +G       Y  ++ GLCKS  +  A ++ + 
Sbjct: 560 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 619

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M     +PD   +ST++          EA+ L+ ++
Sbjct: 620 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 655



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 100/389 (25%), Positives = 184/389 (47%)

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+ M   G VP+T TY ++  GLC+  ++  A    +EM  +G +PD    + ++     
Sbjct: 197 LRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMR 256

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G   + +      +  G P  LITY +LI  +CK   + +A E+L  M   GC P+  T
Sbjct: 257 EGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRT 316

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +  L+   C++     A+ +++ +  R + P++++Y  +++ L         +K+L+ M 
Sbjct: 317 FCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMT 376

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            +   P V  Y+ LI G    G ++ A    + M      PDI  YN ++  L K G + 
Sbjct: 377 FSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKME 436

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA   L  + G    P  +T+   I G +K G M +A   + +M+++G+ P++  +  LI
Sbjct: 437 EASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLI 496

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G  +A  + EA+ + + +   G           IHGL K+ +V  A++V   +      
Sbjct: 497 NGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLV 556

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           PD   +S+++      G  E+A++L  ++
Sbjct: 557 PDVFTYSSLISGFCKQGEVEKAFELHDEM 585



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 101/378 (26%), Positives = 183/378 (48%), Gaps = 1/378 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  FC +G++  A +L D M  +   P+      L+ GL +   I++A K+ 
Sbjct: 558 DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 617

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD++TY+ M+ G CK   +  A +L  EM   G +P    YN ++      
Sbjct: 618 DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 677

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++A+  +++ L+KG    L ++  LI+  CK C I  A ++  +M  +   PD VTY
Sbjct: 678 GDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 736

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +++++ CK GK ++A L+   +  R +  +++TY +L++     G    V  + + M  
Sbjct: 737 TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVA 796

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TY ++I   CK   +  A    +++V K        ++ ++ ALCK   L E
Sbjct: 797 KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 856

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +LL  +      P L   +TL+    + G M++A  ++  +   G+ PD  T   L+ 
Sbjct: 857 ASKLLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 916

Query: 476 GFCRADQVEEAVDLLKEI 493
           G       E+A +L+K++
Sbjct: 917 GNLNDTDSEDARNLIKQL 934



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 96/431 (22%), Positives = 184/431 (42%), Gaps = 40/431 (9%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSG---GVPDTI-TYNMMVGGLCKRGQIRSAIALLDE 212
           ++IR ++  +++    ++L     S    GVP  + +++++   LC       A  +L +
Sbjct: 70  DVIRAVLHQNQVGDPKRLLDFFYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQ 129

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           M               +RT + +     ++ FW        P   + + ILI+   +   
Sbjct: 130 M---------------IRTPYSSSSILDSVLFWFRNYGGSSP---VVFDILIDSYKRMGM 171

Query: 273 IARAIEV------------------LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           +  A  V                  L  M  +G  P+  TY  +    C+  + ++A L 
Sbjct: 172 LDEAANVFFVAKNDSILISLIRCNSLRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLT 231

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
              +   G++P+    + L+      G  D V +I D+M        + TYN+LI+GLCK
Sbjct: 232 FEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCK 291

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
           +G +++A      M++  C+P+  T+  ++   C+E  +  AL+LL  +   +  P  ++
Sbjct: 292 FGKMEKAAEILKGMITLGCKPNSRTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVS 351

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y  +I+GL     +  A  L  +M  +G+ P+ + + TLI G+    ++EEA  LL  + 
Sbjct: 352 YGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGRIEEARRLLDGMS 411

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
             G       Y  +I  L K+ K++ A   L  +     KPD   F   +   +  G   
Sbjct: 412 CSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMT 471

Query: 555 EAYKLWQKLIE 565
           EA K + ++++
Sbjct: 472 EAAKYFDEMLD 482


>gi|296087509|emb|CBI34098.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  221 bits (563), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 226/457 (49%), Gaps = 9/457 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +C    +  A +L+D M +RN +P       +I GL     +  A+K+L+ M  SG
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ + Y+ ++ G    G+I  A  LLD MS SG  PD+  YN I+  +   GK ++A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            +  +   +G  P  +T+   I    K   +  A +  D+M   G  P+   Y  L+N  
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K G   +A+ +  +L + G+ P+  T +  +H L   G      K+   + E    P V
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FTY+ LI+G CK G V++A    ++M  K   P+I  YN ++  LCK G +  A +L   
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  +TY+T+IDG  K   + +A  L+ +M   G+ P    +  L+ G C+   
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 480

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E+A++L +E+ ++G     S +  +I G CKS K+  A Q+ + MI+ +  PD   ++T
Sbjct: 481 MEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 539

Query: 543 IVKKVADDGMTEEAYKLWQKLIE--------WKVFEK 571
           ++      G  EEA  L++++ E        + +FEK
Sbjct: 540 VIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEK 576



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 233/473 (49%), Gaps = 18/473 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+      GK+ +AS  +  +  R   PD       I G  +  ++ +A+K    M+ 
Sbjct: 224 NAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLD 283

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +P+   Y +++ G  K G +  A+++   +   G  PDV T +  +  +  NG+ ++
Sbjct: 284 HGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQE 343

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  + +   KG  P + TY+ LI   CKQ  + +A E+ D+M ++G +P+I  YN+LV+
Sbjct: 344 ALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVD 403

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G    A  + + +  +G+EP+S+TY+T++              +   M      P
Sbjct: 404 GLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQP 463

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             F YN L++G CK G +++A+N F +M+ K     + ++NT++   CK   + EA QL 
Sbjct: 464 HSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLF 522

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-----------------NGI 463
             +      P  +TY T+ID   K G ME+A +L+ +M E                  G+
Sbjct: 523 QEMIAKQIMPDHVTYTTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGV 582

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD++T+  +I+  C+ D + EA  L  E+  +G   + + + L+I  LCK + +  A +
Sbjct: 583 KPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASK 642

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
           +L+ M     KP     ST+V+   + G  +EA ++++ +    +    TTL+
Sbjct: 643 LLDEMGELGLKPSLAACSTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLI 695



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/451 (27%), Positives = 223/451 (49%), Gaps = 3/451 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH-FCINLIRGLIRIDRIEKASKVLQI 177
           T N ++   C  GK+  A++++  M      P+   FC+ LI G  R   + +A ++L  
Sbjct: 82  TYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL-LIEGYCREHNMGRALELLDE 140

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M     VP  ++Y  M+ GLC    +  A  LL++M+ SG +P+V+ Y+T++      G+
Sbjct: 141 MEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSTLIMGYASEGR 200

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A          G  P +  Y  +I  + K   +  A   L ++   G  PD VT+ +
Sbjct: 201 IEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGA 260

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
            +    K GK  +A    + +L  G+ PN+  Y  L++     G       I   ++   
Sbjct: 261 FILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRHLHALG 320

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V T +  I+GL K G V  A+  F+++  K   PD+ TY++++   CK+G + +A 
Sbjct: 321 VLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAF 380

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L   +     +P +  YN L+DGL K G +++A  L+  M E G+ PD +T+ T+I G+
Sbjct: 381 ELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGY 440

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+++ V EA  L  E+  +G +  +  Y  ++HG CK   ++ A+ +   M+   +    
Sbjct: 441 CKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFREMLQKGFATTL 500

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + F+T++         +EA +L+Q++I  ++
Sbjct: 501 S-FNTLIDGYCKSCKIQEASQLFQEMIAKQI 530



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 211/456 (46%), Gaps = 35/456 (7%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M  +  +P+ +    +  GL R  R+ +A    + M  +G  PD    + ++ G  + G 
Sbjct: 1   MGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGD 60

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           I   + + D M   G   ++ITYN ++  +   GK ++A    K  +  GC P   T+ +
Sbjct: 61  IDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMITLGCKPNSRTFCL 120

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LIE  C++  + RA+E+LD+M      P  V+Y +++N  C       A  ++  +   G
Sbjct: 121 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 180

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           ++PN + Y+TL+    S G  +   ++LD M+ +  +P +F YN +I+ L K G ++ A 
Sbjct: 181 LKPNVVVYSTLIMGYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 240

Query: 383 NSFNQMVSKNCQPDIVT-----------------------------------YNTVLGAL 407
               ++  +  +PD VT                                   Y  ++   
Sbjct: 241 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 300

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            K G L EAL +   L+     P + T +  I GL K G +++A+ ++ ++ E G+ PD 
Sbjct: 301 FKAGNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 360

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T+ +LI GFC+  +VE+A +L  E+  +G       Y  ++ GLCKS  +  A ++ + 
Sbjct: 361 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 420

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M     +PD   +ST++          EA+ L+ ++
Sbjct: 421 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEM 456



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 106/415 (25%), Positives = 179/415 (43%), Gaps = 53/415 (12%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G L +A  +   +     +PD   C   I GL++  R+++A KV   +   G VPD  TY
Sbjct: 304 GNLMEALSIFRHLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 363

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           + ++ G CK+G++  A  L DEM + G  P++  YN ++  +  +G  ++A   +     
Sbjct: 364 SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 423

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           KG  P  +TY+ +I+  CK   +A A  +  +M  +G  P    YN+LV+  CK+G  + 
Sbjct: 424 KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 483

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ +   +L +G    ++++NTL+             ++   M      P   TY  +I+
Sbjct: 484 AMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 542

Query: 371 GLCKYG-----------------LVDRAINSFNQMVSKNCQPDIVTYNTVL--------- 404
             CK G                 +VD     F +MV+K  +PD VTY  V+         
Sbjct: 543 WHCKAGKMEEANLLFKEMQERNLIVDTVFALFEKMVAKGVKPDEVTYGLVIYAHCKEDNL 602

Query: 405 --------------------------GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
                                      ALCK   L EA +LL  +      P L   +TL
Sbjct: 603 VEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDEMGELGLKPSLAACSTL 662

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           +    + G M++A  ++  +   G+ PD  T   L+ G       E+A +L+K++
Sbjct: 663 VRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLNDTDSEDARNLIKQL 717


>gi|134302847|gb|ABO70667.1| restorer-of-fertility [Raphanus sativus]
          Length = 687

 Score =  221 bits (562), Expect = 9e-55,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 227/457 (49%), Gaps = 12/457 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L   C   ++++A  L   M      P+      L+ GL R  RI +A  +L
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFD 234
             M+  G  P  ITY  +V G+CK+G   SA+ LL +M  VS   P+V+ Y+ I+ ++  
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G+   A   + +   KG  P L TY  +I   C     + A ++L +M     SPD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N   K+GK+ +A  + + +L RG+ PN+ITY++++     +   DA + +  +M 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               SP + T+N LI+G C    +D  +   ++M       D  TYNT++      G LN
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-----------NGI 463
            AL LL  +  S   P ++T +TL+DGL   G ++ A+ ++  M +           NG+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD  T+  LI G     +  EA +L +E+  RG       Y  +I GLCK  ++D A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           + + M S  + P+   F+T++      G  ++  +L+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 221/457 (48%), Gaps = 12/457 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   I+   C +G    A  L+  M   + I P+      +I  L +  R   A  +   
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD  TYN M+ G C  G+   A  LL EM      PDV+TYN ++      GK
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A   + + L +G  P  ITY+ +I+  CKQ  +  A  +   MA +GCSP+++T+N+
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C   + DD + +++ +   G+  ++ TYNTL+H     G  +A   +L  M  + 
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-----------NCQPDIVTYNTVLGA 406
             P + T + L++GLC  G +  A+  F  M                +PD+ TYN ++  
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           L  EG   EA +L   +      P  ITY+++IDGL K+  +++A  ++  M     SP+
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T  TLI G+C+A +V++ ++L  E+G+RG       Y  +I G  K   ++ A+ + +
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            MISS   PD      ++  +      + A  + +KL
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 225/453 (49%), Gaps = 13/453 (2%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDF-HFCINLIRGLIRIDRIEKASKVLQIMVM 180
           K+   F     L DA  L   M R   +P    FC  L+  ++R++R +    + Q M  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFC-KLMGVVVRMERPDLVISLYQKMER 107

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
                D  ++N+++   C   ++  A++   +++  G  PDV+T+ T+L  +    +  +
Sbjct: 108 KQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSE 167

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +       C P ++T+T L+  +C++  I  A+ +LD M  +G  P  +TY ++V+
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 301 FSCKQGKYDDAVLVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
             CK+G   D V  +N  L R ME      PN + Y+ ++ SL   G       +   M 
Sbjct: 228 GMCKKG---DTVSALN--LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E    P +FTYN +I G C  G    A     +M+ +   PD+VTYN ++ A  KEG   
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +L   +      P  ITY+++IDG  K+  ++ A  ++  M   G SP+ IT  TLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C A ++++ ++LL E+ + G     + Y  +IHG      ++ A+ +L+ MISS   
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           PD     T++  + D+G  ++A ++++ + + K
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 209/410 (50%), Gaps = 1/410 (0%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           + L  G   I  +E A  +   M+ S  +P  + +  ++G + +  +    I+L  +M  
Sbjct: 48  LKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMER 107

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
                D+ ++N +++      K   A+  +    + G  P ++T+T L+  +C +  ++ 
Sbjct: 108 KQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSE 167

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ +   M    C P++VT+ +L+N  C++G+  +AV +++ ++  G++P  ITY T++ 
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 336 SLGSRGCWDAVDKILDIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            +  +G   +   +L  M E SH  P V  Y+ +I+ LCK G    A N F +M  K   
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD+ TYN+++   C  G  ++A QLL  +     SP ++TYN LI+   K+G   +A  L
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y +M+  GI P+ IT+ ++I GFC+ ++++ A  +   +  +G       +  +I G C 
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +K++D  +++L  M  +    D T ++T++      G    A  L Q++I
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 200/400 (50%), Gaps = 18/400 (4%)

Query: 112 FVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           F E  EK       T N ++  FCS G+ +DA +L+  M  R   PD      LI   ++
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             +  +A ++   M+  G +P+TITY+ M+ G CK+ ++ +A  +   M+  GC P++IT
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           +NT++       +    +    +    G      TY  LI        +  A+++L +M 
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-----------GMEPNSITYNTL 333
             G  PDIVT ++L++  C  GK  DA+ +   +              G+EP+  TYN L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L + G +   +++ + M      P   TY+ +I+GLCK   +D A   F+ M SK+ 
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P++VT+ T++   CK G +++ L+L   +         ITY TLI G  K G +  A+ 
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           ++ +M+ +G+ PD IT R ++ G    ++++ AV +L+++
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 11/319 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC + +L  A  +  +MA +   P+      LI G     RI+   ++L  M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G V DT TYN ++ G    G + +A+ LL EM  SG  PD++T +T+L  + DNGK 
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 239 KQAIGFWKDQLRK-----------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           K A+  +K   +            G  P + TY ILI  +  +     A E+ ++M   G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD +TY+S+++  CKQ + D+A  + +++ S+   PN +T+ TL++     G  D   
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M          TY  LI G  K G ++ A++ F +M+S    PD +T   +L  L
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661

Query: 408 CKEGMLNEALQLLHLLNGS 426
             +  L  A+ +L  L  S
Sbjct: 662 WSKEELKRAVAMLEKLQMS 680


>gi|356532718|ref|XP_003534918.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 529

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/446 (29%), Positives = 229/446 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC  G++  +  ++  + +    PD      L++GL     ++K+      +
Sbjct: 47  TLNILINCFCHLGQMAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKV 106

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G   D ++Y  ++ GLCK G+ R A+ LL  +      P+V+ YNTI+  +  +   
Sbjct: 107 VAQGFQMDHVSYGTLLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLV 166

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   + +   +G  P  ITYT LI   C    +  A  +LD+M ++  +P +  YN L
Sbjct: 167 NEAYDLYSEMDARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNIL 226

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK+G   +A  ++  +   G++P  +TY+TL+      G      +I   M +   
Sbjct: 227 INALCKEGNVKEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGV 286

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V++YNI+INGLCK   VD A+N   +M+ KN  PD VTYN+++  LCK G +  AL 
Sbjct: 287 NPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALN 346

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L++ ++       ++TY +L+D L K   ++KA  L+ +M E GI P   T+  LI G C
Sbjct: 347 LMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLC 406

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +++ A +L + +  +G  +    Y ++I GLCK    D A+ +   M  +   P+  
Sbjct: 407 KGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAV 466

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            F  I++ + +    ++A KL  ++I
Sbjct: 467 TFEIIIRSLFEKDENDKAEKLLHEMI 492



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 221/455 (48%), Gaps = 8/455 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           D  T N +++  C +G++  +    D ++A+  Q+    +   L+ GL +I     A K+
Sbjct: 79  DTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYG-TLLNGLCKIGETRCAVKL 137

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+++      P+ + YN ++ GLCK   +  A  L  EM   G  PD ITY T++     
Sbjct: 138 LRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFCL 197

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+   A     + + K   P +  Y ILI  +CK+  +  A  +L  M  EG  P +VT
Sbjct: 198 LGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVVT 257

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y++L++  C  G+  +A  + + ++  G+ PN  +YN +++ L        VD+ ++++ 
Sbjct: 258 YSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK---CKRVDEAMNLLR 314

Query: 355 EASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           E  H    P   TYN LI+GLCK G +  A+N  N+M  +    D+VTY ++L ALCK  
Sbjct: 315 EMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQ 374

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L++A  L   +      P + TY  LIDGL K G ++ A  L+  ++  G   D  T+ 
Sbjct: 375 NLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYT 434

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            +I G C+    +EA+ +  ++   G       + ++I  L +  + D A ++L  MI+ 
Sbjct: 435 VMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAK 494

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
                D   + +  +  +D   +  +++  K + W
Sbjct: 495 GLLVLDFKVADVFVQNENDKAEKLLHEMIAKGLLW 529



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 207/422 (49%), Gaps = 16/422 (3%)

Query: 85  LAVNKKLRGLTI---TKKS---HDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           + +N  ++GL +    KKS   HD  +        + D  +   +L   C  G+   A K
Sbjct: 81  ITLNTLMKGLCLKGEVKKSLHFHDKVVAQG----FQMDHVSYGTLLNGLCKIGETRCAVK 136

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L+ ++  R+  P+      +I GL +   + +A  +   M   G  PD ITY  ++ G C
Sbjct: 137 LLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIYGFC 196

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
             GQ+  A +LLDEM +    P V  YN ++  +   G  K+A        ++G  P ++
Sbjct: 197 LLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKPGVV 256

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY+ L++  C    +  A ++   M   G +P++ +YN ++N  CK  + D+A+ ++  +
Sbjct: 257 TYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREM 316

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKY 375
           L + M P+++TYN+L+  L   G    +   L++MNE  H      V TY  L++ LCK 
Sbjct: 317 LHKNMVPDTVTYNSLIDGLCKSG---RITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 373

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
             +D+A   F +M  +  QP + TY  ++  LCK G L  A +L   L    C   + TY
Sbjct: 374 QNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTY 433

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
             +I GL K+G  ++A+ +  +M +NG  P+ +T   +I      D+ ++A  LL E+  
Sbjct: 434 TVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIA 493

Query: 496 RG 497
           +G
Sbjct: 494 KG 495



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 219/420 (52%), Gaps = 3/420 (0%)

Query: 146 RNQIPDFHFCINLIRG-LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
           R+  P   F  N I G L ++ +   A  + + M + G   + +T N+++   C  GQ+ 
Sbjct: 5   RHTPPIIEF--NKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMA 62

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
            + ++L ++   G +PD IT NT+++ +   G+ K+++ F    + +G     ++Y  L+
Sbjct: 63  FSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLL 122

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             +CK      A+++L  +      P++V YN++++  CK    ++A  + + + +RG+ 
Sbjct: 123 NGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIF 182

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P++ITY TL++     G       +LD M   + +P V+ YNILIN LCK G V  A N 
Sbjct: 183 PDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNL 242

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
              M  +  +P +VTY+T++   C  G +  A Q+ H +     +P + +YN +I+GL K
Sbjct: 243 LAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCK 302

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              +++AM L  +M+   + PD +T+ +LI G C++ ++  A++L+ E+  RG       
Sbjct: 303 CKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVT 362

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  ++  LCK++ +D A  +   M     +P    ++ ++  +   G  + A +L+Q L+
Sbjct: 363 YTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLL 422



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 218/443 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           NKIL +     +   A  L   M  +    +F     LI     + ++  +  VL  ++ 
Sbjct: 14  NKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSVLGKILK 73

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PDTIT N ++ GLC +G+++ ++   D++   G + D ++Y T+L  +   G+ + 
Sbjct: 74  LGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCKIGETRC 133

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +    +   P ++ Y  +I+ +CK   +  A ++  +M   G  PD +TY +L+ 
Sbjct: 134 AVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAITYTTLIY 193

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G+   A  +++ ++ + + P    YN L+++L   G       +L +M +    P
Sbjct: 194 GFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVMTKEGIKP 253

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY+ L++G C  G V  A   F+ MV     P++ +YN ++  LCK   ++EA+ LL
Sbjct: 254 GVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLL 313

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +   +  P  +TYN+LIDGL K G +  A+ L  +M   G   D +T+ +L+   C+ 
Sbjct: 314 REMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKN 373

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             +++A  L  ++ +RG +     Y  +I GLCK  ++  A ++ + ++      D   +
Sbjct: 374 QNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTY 433

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++  +  +GM +EA  +  K+
Sbjct: 434 TVMISGLCKEGMFDEALAIKSKM 456



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 111/393 (28%), Positives = 203/393 (51%), Gaps = 10/393 (2%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M++    P  I +N ++G L K  Q  +AI+L  +M V G   + +T N ++      G+
Sbjct: 1   MLLVRHTPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQ 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              +       L+ G  P  IT   L++ +C +  + +++   D +  +G   D V+Y +
Sbjct: 61  MAFSFSVLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGT 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDKILDIMNEA 356
           L+N  CK G+   AV ++  +  R   PN + YNT++  L    C D  V++  D+ +E 
Sbjct: 121 LLNGLCKIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGL----CKDKLVNEAYDLYSEM 176

Query: 357 SHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P   TY  LI G C  G +  A +  ++M+ KN  P +  YN ++ ALCKEG +
Sbjct: 177 DARGIFPDAITYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNV 236

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA  LL ++      P ++TY+TL+DG    G ++ A  ++  M++ G++P+  ++  +
Sbjct: 237 KEAKNLLAVMTKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGVNPNVYSYNIM 296

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+  +V+EA++LL+E+  +        Y  +I GLCKS ++  A+ ++  M   R 
Sbjct: 297 INGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEM-HHRG 355

Query: 534 KPDDTV-FSTIVKKVADDGMTEEAYKLWQKLIE 565
           +P D V +++++  +  +   ++A  L+ K+ E
Sbjct: 356 QPADVVTYTSLLDALCKNQNLDKATALFMKMKE 388



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/280 (29%), Positives = 143/280 (51%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P I+ +N ++    K  +Y  A+ +   +  +G+  N +T N L++     G       
Sbjct: 7   TPPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFS 66

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  + +  + P   T N L+ GLC  G V ++++  +++V++  Q D V+Y T+L  LC
Sbjct: 67  VLGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLC 126

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G    A++LL ++   S  P ++ YNT+IDGL K   + +A  LY +M   GI PD I
Sbjct: 127 KIGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAI 186

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ TLI+GFC   Q+  A  LL E+  +        Y ++I+ LCK   V  A  +L +M
Sbjct: 187 TYTTLIYGFCLLGQLMGAFSLLDEMILKNINPGVYIYNILINALCKEGNVKEAKNLLAVM 246

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
                KP    +ST++      G  + A +++  +++  V
Sbjct: 247 TKEGIKPGVVTYSTLMDGYCLVGEVQNAKQIFHAMVQMGV 286



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 45/180 (25%), Positives = 92/180 (51%)

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P I+ +N +LG+L K      A+ L   +         +T N LI+     G M  +  +
Sbjct: 8   PPIIEFNKILGSLAKMKQYLTAISLSKQMEVKGIRANFVTLNILINCFCHLGQMAFSFSV 67

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            G++++ G  PD IT  TL+ G C   +V++++    ++  +G +M + +Y  +++GLCK
Sbjct: 68  LGKILKLGYQPDTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDHVSYGTLLNGLCK 127

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             +   A+++L ++     +P+  +++TI+  +  D +  EAY L+ ++    +F    T
Sbjct: 128 IGETRCAVKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPDAIT 187


>gi|242067341|ref|XP_002448947.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
 gi|241934790|gb|EES07935.1| hypothetical protein SORBIDRAFT_05g002250 [Sorghum bicolor]
          Length = 797

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 253/486 (52%), Gaps = 7/486 (1%)

Query: 84  VLAVNKKLRGLTITKKSHDP-----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           V++ N  L+G    K++ +       +  S G     +  +   ++  F + G++  A  
Sbjct: 165 VVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVINGFFTEGQVDKAYN 224

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L   M  R   P+      +I GL +   +++A  V Q M+  G  PD  TYN ++ G  
Sbjct: 225 LFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYL 284

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
             G+ +  + +L+EMS  G +PD  TY ++L  + +NG+ ++A  F+   +RKG  P + 
Sbjct: 285 SIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFFDSMIRKGIKPNVA 344

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
            Y ILI     +  ++   ++L+ M   G SPD   +N +     K+   D+A+ + N +
Sbjct: 345 IYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM 404

Query: 319 LSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
             +G+ P+ + +  L+ +L   G   DAV K   +MNE   +P +F +N L+ GLC    
Sbjct: 405 KQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGV-APNIFVFNSLVYGLCTVDK 463

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            ++A   + +M+++  +PD+V +NT+L  LC +G + +A +L+ L+      P +I+Y T
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTT 523

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI G    G +++A      M+  G+ PD+ T+ TL+ G+CRA ++++A  + +E+ + G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y  ++HGL  +++   A ++   MI+S  + +  +++ I+  ++ +   +EA+
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAF 643

Query: 558 KLWQKL 563
           KL+Q L
Sbjct: 644 KLFQSL 649



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 113/492 (22%), Positives = 216/492 (43%), Gaps = 115/492 (23%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIA------------------------------------ 208
           PD  TY++++G  C+ G++    A                                    
Sbjct: 92  PDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMDI 151

Query: 209 LLDEMSVSGCEPDVITYNTILR-------------------------------------- 230
           L+  M   GC PDV++YNT+L+                                      
Sbjct: 152 LIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVIN 211

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA-------------- 276
             F  G+  +A   + + + +G  P ++TYT +I+ +CK   + RA              
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 277 ---------------------IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
                                + +L++M+  G  PD  TY SL+N+ C  G+  +A    
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFFF 331

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           ++++ +G++PN   Y  L+H   ++G    +  +L++M E   SP    +NI+     K 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
            ++D A++ FN+M  +   PD+V +  ++ ALCK G +++A+   + +     +P +  +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA---VDLLKE 492
           N+L+ GL      EKA   Y +M+  GI PD +   T++   C   QV +A   +DL++ 
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +G R + +   +Y  +I G C   ++D A + L++M+S   KPD+  ++T++      G 
Sbjct: 512 VGTRPDVI---SYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 553 TEEAYKLWQKLI 564
            ++AY ++++++
Sbjct: 569 IDDAYGVFREML 580



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 188/392 (47%), Gaps = 4/392 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  + ++G L++   L+++M      PD H    +     +   I++A  +   M   G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD + +  ++  LCK G++  A+   ++M   G  P++  +N+++  +    K+++A 
Sbjct: 409 LSPDVVNFGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAK 468

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            F+ + L +G  P ++ +  ++  +C +  + +A  ++D M   G  PD+++Y +L+   
Sbjct: 469 EFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGH 528

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G+ D+A   ++ +LS G++P+  TYNTLLH     G  D    +   M     +P V
Sbjct: 529 CLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ +++GL        A   +  M++   Q +I  YN +L  L K   ++EA +L   
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L        + T+N +I  L K G  E AM L+  +   G+ PD  T+  +         
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708

Query: 483 VEEAVDLLKEIGKRG----NKMRNSAYRLVIH 510
           +EE  DL   + K G    ++M N+  R ++H
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLH 740



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 187/401 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N I   +  +  + +A  + + M ++   PD      LI  L ++ R++ A    
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNFGALIDALCKLGRVDDAVLKF 436

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+   +N +V GLC   +   A     EM   G  PDV+ +NTIL  +   
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A        R G  P +I+YT LI   C    I  A + LD M   G  PD  TY
Sbjct: 497 GQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTY 556

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  C+ G+ DDA  V   +L  G+ P  +TY+T+LH L +   +    ++   M  
Sbjct: 557 NTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMIT 616

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +     ++ YNI++NGL K   VD A   F  + SK+ Q +I T+N ++GAL K G   +
Sbjct: 617 SGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNED 676

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ L   ++     P + TY  + + L ++G +E+   L+  M ++G +P+      L+ 
Sbjct: 677 AMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVR 736

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
                  +  A   L ++ ++   +  S   ++I  L + +
Sbjct: 737 RLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDE 777



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 145/299 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N IL N C++G++  A +LID+M R    PD      LI G   + RI++A+K L +M+ 
Sbjct: 487 NTILCNLCTKGQVMKAQRLIDLMERVGTRPDVISYTTLIGGHCLVGRIDEAAKSLDVMLS 546

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD  TYN ++ G C+ G+I  A  +  EM  +G  P V+TY+TIL  +F   +F +
Sbjct: 547 VGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSE 606

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + +  G    +  Y I++  + K   +  A ++   +  +    +I T+N ++ 
Sbjct: 607 AKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIG 666

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G+ +DA+ +   + S G+ P+  TY  +  +L   G  +  D +   M ++  +P
Sbjct: 667 ALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTP 726

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
                N L+  L   G + RA    +++  KN   +  T   ++  L ++   + A  L
Sbjct: 727 NSRMLNALVRRLLHRGDITRAGAYLSKLDEKNFSLEASTTAMLISLLSRDEYHHHATSL 785



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 145/305 (47%), Gaps = 49/305 (16%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSL----GSRGCWDAVDKILDIMNEASH------ 358
           DDA+ + + LL+     + I +N LL ++    G R      + ++ + N          
Sbjct: 31  DDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKV 90

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSF---------------NQMVSK------------ 391
           +P + TY+ILI   C+ G ++    +F               NQ++              
Sbjct: 91  TPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAMD 150

Query: 392 ---------NCQPDIVTYNTVLGALCKEGMLNEALQLLHLL---NGSSCSPCLITYNTLI 439
                     C PD+V+YNT+L   C E    EAL+LLH++    G SC P +++Y T+I
Sbjct: 151 ILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATVI 210

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +G   +G ++KA  L+ +MM+ GI P+ +T+ T+I G C+A  V+ A  + +++  +G K
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             N  Y  +IHG     K    +++LE M +   KPD   + +++  + ++G   EA   
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFF 330

Query: 560 WQKLI 564
           +  +I
Sbjct: 331 FDSMI 335



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/202 (22%), Positives = 101/202 (50%), Gaps = 14/202 (6%)

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCK----EGMLNEALQLLHLLNGS------S 427
           +D A+  F+ +++      I+ +N +L A+ +         E+  ++ L N         
Sbjct: 30  LDDALKLFDGLLTHARPASIIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIK 89

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            +P L TY+ LI    + G +E     +G ++++G   ++I    L+ G C A ++ EA+
Sbjct: 90  VTPDLCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLREAM 149

Query: 488 D-LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK---PDDTVFSTI 543
           D L+K + + G      +Y  ++ G C  K+ + A+++L +M  S+ +   P+   ++T+
Sbjct: 150 DILIKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYATV 209

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           +     +G  ++AY L+ ++++
Sbjct: 210 INGFFTEGQVDKAYNLFLEMMD 231


>gi|359494794|ref|XP_002267896.2| PREDICTED: pentatricopeptide repeat-containing protein At3g07290,
           mitochondrial [Vitis vinifera]
          Length = 876

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 220/439 (50%), Gaps = 1/439 (0%)

Query: 128 CSRGKLTDASKLIDIMARR-NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           C R  L +A ++ + M++  N  P+      LI GL    R+E+A ++ Q MV  G  P 
Sbjct: 217 CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS 276

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T TY +++   C  G    A+ +LDEM+   C P+V TY  ++  +   GK ++A G ++
Sbjct: 277 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 336

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             L+ G  P +IT+  LI   CK+  +  A ++L  M    C P+I TYN L+   C+  
Sbjct: 337 KMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVS 396

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K   A L++  ++  G+ P+ +TYN L+      G  +    I + MN A   P  FT+ 
Sbjct: 397 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 456

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI+GLCK G +++A      MV K    D VT+  ++   CK G   +   L   +  +
Sbjct: 457 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 516

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            C     T+N  +D L K   + +A  + G+MM+ G+ P  +TH  LI G CRA +   +
Sbjct: 517 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 576

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + +L+ + + G       Y ++I+GLC + +V+ A  +L  M S    P+   ++ +VK 
Sbjct: 577 LKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 636

Query: 547 VADDGMTEEAYKLWQKLIE 565
               G  + A+++   +++
Sbjct: 637 HVKAGRLDRAFQIVSTMVK 655



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 211/430 (49%), Gaps = 9/430 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G +  A +L+ +M + N  P+      L+ GL R+ +  KA  +L+ +
Sbjct: 349 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 408

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V +G +PD +TYN++V G CK GQ+  A  + + M+ +G EPD  T+  ++  +   G+ 
Sbjct: 409 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 468

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPDIVTY 295
           +QA G     ++KG     +T+T LI+  CK   I +A +V    ++M    C     T+
Sbjct: 469 EQANGILGSMVKKGISLDEVTFTALIDGHCK---IGKAKDVCFLFENMVENRCLTTAHTF 525

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N  ++   K  K ++A  ++  ++  G+ P+ +T+  L+      G      K+L+ M +
Sbjct: 526 NCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 585

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A  SP V+TY I+INGLC  G V+ A      M S    P+  TY  ++ A  K G L+ 
Sbjct: 586 AGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDR 645

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDG--LAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           A Q++  +  + C P    Y+ L+ G  L+      +A+   G +    +S ++  +  L
Sbjct: 646 AFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCL 705

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
                R   V+ A+ +  EI K G    +  Y  ++ GLCK  ++  A Q+ + M+    
Sbjct: 706 SSHVFRLMDVDHALKIRDEIKKCGVPTED-LYNFLVVGLCKEGRIIEADQLTQDMVKHGL 764

Query: 534 KPDDTVFSTI 543
            PD  + S I
Sbjct: 765 FPDKAISSII 774



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 182/397 (45%), Gaps = 1/397 (0%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  V + MV  G V   I Y  +V  LCK G +++A     ++   G   D     +++ 
Sbjct: 155 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 214

Query: 231 TMFDNGKFKQAIG-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                    +A   F K    + C P  +TY+ILI  +C+   +  A ++  +M  +GC 
Sbjct: 215 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 274

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P   TY  L+   C  G  D A+ +++ + ++   PN  TY  L+  L   G  +  + +
Sbjct: 275 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 334

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M +    P + T+N LING CK G V  A    + M   NC+P+I TYN ++  LC+
Sbjct: 335 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 394

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
                +A  LL  +  +   P  +TYN L+DG  K+G +  A  ++  M   G+ PD  T
Sbjct: 395 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFT 454

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              LI G C+  ++E+A  +L  + K+G  +    +  +I G CK  K      + E M+
Sbjct: 455 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV 514

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            +R       F+  +  +  D    EA  +  K++++
Sbjct: 515 ENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 551



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 208/456 (45%), Gaps = 35/456 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  FC  G+L  A  + + M      PD      LI GL ++ R+E+A+ +L
Sbjct: 416 DRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGIL 475

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G   D +T+  ++ G CK G+ +    L + M  + C     T+N  L  +  +
Sbjct: 476 GSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKD 535

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  +A       ++ G  P ++T+TILIE  C+    A ++++L+ M   GCSP++ TY
Sbjct: 536 YKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTY 595

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             ++N  C  G+ ++A  ++ ++ S G+ PN  TY  L+ +    G  D   +I+  M +
Sbjct: 596 TIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 655

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    Y+ L++G                          V  NT +GA         
Sbjct: 656 NGCQPNSHIYSALLSGF-------------------------VLSNTAIGA--------R 682

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL     L+  S S      N L   + +   ++ A+ +  ++ + G+  +D+ +  L+ 
Sbjct: 683 ALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVV 741

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  ++ EA  L +++ K G    + A   +I   CK+ K D  ++ ++L++ +++ P
Sbjct: 742 GLCKEGRIIEADQLTQDMVKHG-LFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVP 800

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
               +  ++  + ++G  +EA KL   L+     E+
Sbjct: 801 SFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEE 836



 Score = 72.4 bits (176), Expect = 7e-10,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 107/221 (48%), Gaps = 9/221 (4%)

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           LD M E     +   Y+ L+  L K  +   A   + +MV++      + Y TV+ ALCK
Sbjct: 124 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 183

Query: 410 EGMLNEA----LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGIS 464
            G +  A     ++L L  G     C     +L+    ++  + +A  ++ +M  E    
Sbjct: 184 NGFVQAAEMFCCKVLRLGFGLDTHVC----TSLVLANCRRDDLGEAFRVFEKMSKEENCR 239

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P+ +T+  LI G C A ++EEA  L +E+ ++G +     Y ++I   C     D A+++
Sbjct: 240 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 299

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           L+ M +    P+   ++ ++ ++  +G  EEA  +++K+++
Sbjct: 300 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 340


>gi|449462483|ref|XP_004148970.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 917

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 128/413 (30%), Positives = 223/413 (53%), Gaps = 14/413 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC  GK   A  L + M      PD      LI  L +  ++ +A+K+L++++  G
Sbjct: 499 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRG 558

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            + D +T   +V GLC + +I  A  L  +M   GC P+V+T  T+++ +  +G  K A+
Sbjct: 559 CILDVVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIAL 618

Query: 243 GFWKDQLRK------GCPPYLITYTILIEQVCKQCGIA-RAIEVLDDMAIEGCSPDIVTY 295
              K+ L         C P  I+Y+I+I+ +CK CG    A E+  +M   G  PD+++Y
Sbjct: 619 ELHKNMLSDTSPYGINCKPNAISYSIIIDGLCK-CGREDEARELFKEMKALGVIPDVISY 677

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            SL++  C+ GK+ DA  + N ++  G++P+  T++ L+  L   G     +++L++M +
Sbjct: 678 TSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQ 737

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TY  L+ GLC    +  A   F +M    C PD+VTY T++  LC+ G +  
Sbjct: 738 RGCIPNTVTYTTLVKGLCMNDRISEATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKT 797

Query: 416 ALQLLHLL------NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           AL+L   +       G++  P +I+Y+ +IDGL K G  ++A  L+ +M   G+ P+ I+
Sbjct: 798 ALELHKKMLSDTGQYGTNFKPDVISYSIIIDGLCKHGREDEARELFKEMKALGVIPNVIS 857

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + +LI GFCR+ ++E+A  L  E+  +G ++    Y ++IHG CK  ++D A+
Sbjct: 858 YTSLIHGFCRSGKLEDAKHLFNEMVDQGVQLNAVTYSVMIHGFCKEGQIDKAL 910



 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 134/448 (29%), Positives = 239/448 (53%), Gaps = 31/448 (6%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C R  +T +S LIDI+ +  ++ +                   A+++L++M+  G + D 
Sbjct: 342 CIRPDVTTSSMLIDILCKEGKVIE-------------------ANELLEVMIQRGCILDI 382

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +TY+ ++ GLC   +I  A  L   M   GC PD ITY T+++ +   G    A+   ++
Sbjct: 383 VTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQE 442

Query: 248 QL----RKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
            L    R G  C P LI+Y+I+I+ +CK      A E+ ++M  +G  PD+++Y +L++ 
Sbjct: 443 MLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHG 502

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  GK++ A  + N +L  G++P+  T + L+  L  +G     +K+L+++ +      
Sbjct: 503 FCLSGKWEKAKCLFNEMLDVGIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILD 562

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL-L 420
           V T   L+ GLC    + +A   F +M    C P++VT  T++  LC+ G +  AL+L  
Sbjct: 563 VVTCTTLVKGLCMKHRISKATQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHK 622

Query: 421 HLLNGSS-----CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           ++L+ +S     C P  I+Y+ +IDGL K G  ++A  L+ +M   G+ PD I++ +LI 
Sbjct: 623 NMLSDTSPYGINCKPNAISYSIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIH 682

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GFCR+ + ++A  L  E+   G +   + + ++I  LCK  KV  A ++LE+MI     P
Sbjct: 683 GFCRSGKWKDAKYLFNEMVDIGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIP 742

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +   ++T+VK +  +    EA +L+ K+
Sbjct: 743 NTVTYTTLVKGLCMNDRISEATQLFMKM 770



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 143/512 (27%), Positives = 263/512 (51%), Gaps = 23/512 (4%)

Query: 83  HVLAVNKKLRGLT-ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           +V  VN+ L  +  I ++ + P + +     +  D  T++ ++   C  GK+ +A++L++
Sbjct: 22  NVKRVNEGLAAMAGIMRRGYIPDIVTYS---IRPDVTTSSMLIDILCKEGKVIEANELLE 78

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           +M +R  I D      LI+GL    RI +A+ +   M   G  PD ITY  ++ GLC+ G
Sbjct: 79  VMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTG 138

Query: 202 QIRSAIALLDEM-SVSG-----CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
            I  A+ L  EM + +G     C+P +I+Y+ I+  +  + +  +A   +K+   +G  P
Sbjct: 139 NINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFKEMKAQGMMP 198

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            +I+YT LI   C      +A  + ++M   G  PD+ T   L++  CK+GK  +A  ++
Sbjct: 199 DVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKEGKVIEANELL 258

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
             ++ RG   + +TY+TL+  L  +       ++   M +    P    Y  L+ GLC+ 
Sbjct: 259 EVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAYGTLMKGLCQT 318

Query: 376 GLVDRAINSFNQMVSKNCQ-------PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           G ++ A++   +M++   Q       PD+ T + ++  LCKEG + EA +LL ++    C
Sbjct: 319 GKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGC 378

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
              ++TY+TLI GL  +  + +A  L+  M + G  PD IT+ TL+ G C+   +  A+ 
Sbjct: 379 ILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQ 438

Query: 489 LLKEI----GKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           L +E+    G+ G K + +  +Y ++I GLCK ++ D A ++ E M +    PD   ++T
Sbjct: 439 LHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTT 498

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           ++      G  E+A  L+ ++++  +    TT
Sbjct: 499 LIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 530



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 137/476 (28%), Positives = 240/476 (50%), Gaps = 28/476 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF-HFCIN--------LIRGLIRID 166
           D  T N ++   C+  ++ +    +  + RR  IPD   + I         LI  L +  
Sbjct: 9   DSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSMLIDILCKEG 68

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           ++ +A+++L++M+  G + D +TY+ ++ GLC   +I  A  L   M   GC PD ITY 
Sbjct: 69  KVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYG 128

Query: 227 TILRTMFDNGKFKQAIGFWKDQL----RKG--CPPYLITYTILIEQVCKQCGIARAIEVL 280
           T+++ +   G    A+   ++ L    R G  C P LI+Y+I+I+ +CK      A E+ 
Sbjct: 129 TLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELF 188

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
            +M  +G  PD+++Y SL++  C  GK++ A  + N +L  G++P+  T   L+      
Sbjct: 189 KEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGVLIDMFCKE 248

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G     +++L++M        + TY+ LI GLC    +  A   F  M    C+PD + Y
Sbjct: 249 GKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLGCRPDAIAY 308

Query: 401 NTVLGALCKEGMLNEALQLLH-LLNGSS------CSPCLITYNTLIDGLAKKGCMEKAMV 453
            T++  LC+ G +N AL L   +LN +S        P + T + LID L K+G + +A  
Sbjct: 309 GTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKEGKVIEANE 368

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L   M++ G   D +T+ TLI G C   ++ EA  L   + K G +     Y  ++ GLC
Sbjct: 369 LLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITYGTLMKGLC 428

Query: 514 KSKKVDMAIQVLELMI--SSRY----KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++  +++A+Q+ + M+  + RY    KP    +S I+  +  D   +EA +L++++
Sbjct: 429 QTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRREDEARELFEEM 484



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 136/507 (26%), Positives = 246/507 (48%), Gaps = 54/507 (10%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T+  ++  FC  GK+ +A++L+++M  R  I D      LI+GL    RI +A+
Sbjct: 231 IQPDVTTSGVLIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEAT 290

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI------------------------- 207
           ++   M   G  PD I Y  ++ GLC+ G+I  A+                         
Sbjct: 291 QLFMSMKKLGCRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTS 350

Query: 208 -----------------ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
                             LL+ M   GC  D++TY+T+++ +    +  +A   +    +
Sbjct: 351 SMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQK 410

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAI----EVLDDMAIEG--CSPDIVTYNSLVNFSCK 304
            GC P  ITY  L++ +C+   I  A+    E+L+D    G  C P +++Y+ +++  CK
Sbjct: 411 LGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCK 470

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             + D+A  +   + ++G+ P+ I+Y TL+H     G W+    + + M +    P V T
Sbjct: 471 DRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVGIQPDVTT 530

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
            ++LI+ LCK G V  A      ++ + C  D+VT  T++  LC +  +++A QL   + 
Sbjct: 531 SSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKATQLFLKMQ 590

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN----GIS--PDDITHRTLIWGFC 478
              C P ++T  TL+ GL + G ++ A+ L+  M+ +    GI+  P+ I++  +I G C
Sbjct: 591 KLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYSIIIDGLC 650

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  + +EA +L KE+   G      +Y  +IHG C+S K   A  +   M+    +PD T
Sbjct: 651 KCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDIGVQPDVT 710

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            FS ++  +  +G   EA +L + +I+
Sbjct: 711 TFSVLIDMLCKEGKVIEANELLEVMIQ 737



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 229/453 (50%), Gaps = 14/453 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+   C   +  +A +L + M  +  +PD      LI G     + EKA  +   M+  G
Sbjct: 464 IIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDVG 523

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  T ++++  LCK+G++  A  LL+ +   GC  DV+T  T+++ +    +  +A 
Sbjct: 524 IQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKAT 583

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV----LDDMAIEG--CSPDIVTYN 296
             +    + GC P ++T   L++ +C+   I  A+E+    L D +  G  C P+ ++Y+
Sbjct: 584 QLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISYS 643

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            +++  CK G+ D+A  +   + + G+ P+ I+Y +L+H     G W     + + M + 
Sbjct: 644 IIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVDI 703

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P V T+++LI+ LCK G V  A      M+ + C P+ VTY T++  LC    ++EA
Sbjct: 704 GVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEA 763

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN------GISPDDITH 470
            QL   +    C P ++TY TL+ GL + G ++ A+ L+ +M+ +         PD I++
Sbjct: 764 TQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISY 823

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             +I G C+  + +EA +L KE+   G      +Y  +IHG C+S K++ A  +   M+ 
Sbjct: 824 SIIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVD 883

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              + +   +S ++     +G  ++A  L+QK+
Sbjct: 884 QGVQLNAVTYSVMIHGFCKEGQIDKA--LFQKM 914



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/504 (26%), Positives = 243/504 (48%), Gaps = 53/504 (10%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T++ ++   C  GK+ +A++L+++M +R  I D      LI+GL    RI +A+
Sbjct: 343 IRPDVTTSSMLIDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEAT 402

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI------------------------- 207
            +   M   G  PD ITY  ++ GLC+ G I  A+                         
Sbjct: 403 WLFMSMQKLGCRPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYS 462

Query: 208 ----------------ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
                            L +EM   G  PDVI+Y T++     +GK+++A   + + L  
Sbjct: 463 IIIDGLCKDRREDEARELFEEMKAQGIMPDVISYTTLIHGFCLSGKWEKAKCLFNEMLDV 522

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P + T ++LI+ +CK+  +  A ++L+ +   GC  D+VT  +LV   C + +   A
Sbjct: 523 GIQPDVTTSSVLIDMLCKKGKVIEANKLLEVVIQRGCILDVVTCTTLVKGLCMKHRISKA 582

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILDIMNEASH-----SPTVFTY 365
             +   +   G  PN +T  TL+  L   G    A++   +++++ S       P   +Y
Sbjct: 583 TQLFLKMQKLGCMPNVVTCATLMKGLCQSGNIKIALELHKNMLSDTSPYGINCKPNAISY 642

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           +I+I+GLCK G  D A   F +M +    PD+++Y +++   C+ G   +A  L + +  
Sbjct: 643 SIIIDGLCKCGREDEARELFKEMKALGVIPDVISYTSLIHGFCRSGKWKDAKYLFNEMVD 702

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P + T++ LID L K+G + +A  L   M++ G  P+ +T+ TL+ G C  D++ E
Sbjct: 703 IGVQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISE 762

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS------SRYKPDDTV 539
           A  L  ++ K G       Y  ++ GLC++  +  A+++ + M+S      + +KPD   
Sbjct: 763 ATQLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVIS 822

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           +S I+  +   G  +EA +L++++
Sbjct: 823 YSIIIDGLCKHGREDEARELFKEM 846



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 205/444 (46%), Gaps = 57/444 (12%)

Query: 178 MVMSGGVPDTITYN--------------------------------------------MM 193
           M ++G  PD+ T+N                                            M+
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
           +  LCK G++  A  LL+ M   GC  D++TY+T+++ +    +  +A   +    + GC
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 254 PPYLITYTILIEQVCKQCGIARAI----EVLDDMAIEG--CSPDIVTYNSLVNFSCKQGK 307
            P  ITY  L++ +C+   I  A+    E+L+D    G  C P +++Y+ +++  CK  +
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D+A  +   + ++GM P+ I+Y +L+H     G W+    + + M +    P V T  +
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTTSGV 240

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LI+  CK G V  A      MV + C  DIVTY+T++  LC +  ++EA QL   +    
Sbjct: 241 LIDMFCKEGKVIEANELLEVMVHRGCILDIVTYSTLIKGLCMKHRISEATQLFMSMKKLG 300

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-------ISPDDITHRTLIWGFCRA 480
           C P  I Y TL+ GL + G +  A+ L+ +M+ +        I PD  T   LI   C+ 
Sbjct: 301 CRPDAIAYGTLMKGLCQTGKINIALHLHQEMLNDTSQYGIKCIRPDVTTSSMLIDILCKE 360

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +V EA +LL+ + +RG  +    Y  +I GLC   ++  A  +   M     +PD   +
Sbjct: 361 GKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGCRPDAITY 420

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
            T++K +   G    A +L Q+++
Sbjct: 421 GTLMKGLCQTGNINIALQLHQEML 444



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 63/207 (30%), Positives = 118/207 (57%), Gaps = 6/207 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T + ++   C  GK+ +A++L+++M +R  IP+      L++GL   DRI +A+
Sbjct: 705 VQPDVTTFSVLIDMLCKEGKVIEANELLEVMIQRGCIPNTVTYTTLVKGLCMNDRISEAT 764

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSG-----CEPDVITYN 226
           ++   M   G +PD +TY  ++ GLC+ G I++A+ L  +M S +G      +PDVI+Y+
Sbjct: 765 QLFMKMQKLGCLPDVVTYGTLMKGLCQTGNIKTALELHKKMLSDTGQYGTNFKPDVISYS 824

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            I+  +  +G+  +A   +K+    G  P +I+YT LI   C+   +  A  + ++M  +
Sbjct: 825 IIIDGLCKHGREDEARELFKEMKALGVIPNVISYTSLIHGFCRSGKLEDAKHLFNEMVDQ 884

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVL 313
           G   + VTY+ +++  CK+G+ D A+ 
Sbjct: 885 GVQLNAVTYSVMIHGFCKEGQIDKALF 911



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 71/237 (29%), Positives = 124/237 (52%), Gaps = 15/237 (6%)

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT---------V 403
           M  A   P  FT+NILIN LC    V+  + +   ++ +   PDIVTY+          +
Sbjct: 1   MRLAGLFPDSFTFNILINCLCNVKRVNEGLAAMAGIMRRGYIPDIVTYSIRPDVTTSSML 60

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +  LCKEG + EA +LL ++    C   ++TY+TLI GL  +  + +A  L+  M + G 
Sbjct: 61  IDILCKEGKVIEANELLEVMIQRGCILDIVTYSTLIKGLCMEHRISEATWLFMSMQKLGC 120

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEI----GKRGNKMRNS--AYRLVIHGLCKSKK 517
            PD IT+ TL+ G C+   +  A+ L +E+    G+ G K + +  +Y ++I GLCK ++
Sbjct: 121 RPDAITYGTLMKGLCQTGNINIALQLHQEMLNDTGRYGIKCKPTLISYSIIIDGLCKDRR 180

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            D A ++ + M +    PD   +++++      G  E+A  L+ ++++  +    TT
Sbjct: 181 EDEARELFKEMKAQGMMPDVISYTSLIHGFCHSGKWEKAKCLFNEMLDVGIQPDVTT 237


>gi|414590917|tpg|DAA41488.1| TPA: hypothetical protein ZEAMMB73_494908 [Zea mays]
          Length = 601

 Score =  221 bits (562), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 144/484 (29%), Positives = 248/484 (51%), Gaps = 14/484 (2%)

Query: 87  VNKKLRGLTITKK-SHDPSLPSSDGPFVENDEKTNNKILQNFCSRG-KLTDASKLIDIMA 144
           +N++LR   +T+  S   +LP         D  + N +L   C RG  L  A  L+  M+
Sbjct: 51  LNRRLRAAPVTEACSLLSALPDV------RDAVSYNIVLAALCRRGGDLRQALSLLADMS 104

Query: 145 RRNQI---PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           R       P+      ++RGL    R ++A  +L+ M  SG   D +TY  ++ GLC   
Sbjct: 105 REAHPAARPNAVSYTMVMRGLCASRRTDEAVALLRSMQASGVRADVVTYGTLIRGLCDAA 164

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++  A+ LL EM  SG  P+VI Y+ +LR    +G+++     +++  R G  P +I +T
Sbjct: 165 ELDGALELLGEMCGSGVHPNVIVYSCLLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFT 224

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
             I+ +CK+  I +A++V D M   G  P++VTYN L+N  CK+G   +A+ + N +  +
Sbjct: 225 GFIDDLCKKGRIGKAVKVKDIMVQRGLEPNVVTYNVLINCLCKEGSVREALALRNEMDDK 284

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILD--IMNEASHSPTVFTYNILINGLCKYGLVD 379
           G+ P+ +TYNTL+  L      D    +L+  I  +    P V T+N +I+GLCK G + 
Sbjct: 285 GVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMR 344

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +AI+    M  + C  ++VTYN ++G   +   +N A+ L+  L  S   P   TY+ LI
Sbjct: 345 QAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYSILI 404

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +G +K   +++A +    M + GI  +   +  L+   C+   +E+A+ L  E+      
Sbjct: 405 NGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMNCG- 463

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +   AY  +++G CKS  +  A Q+L+ M+     PD   +S ++   A  G  EEA ++
Sbjct: 464 LDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEAERV 523

Query: 560 WQKL 563
            +++
Sbjct: 524 LKQM 527



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 202/373 (54%), Gaps = 3/373 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L+ +C  G+  D SK+ + M+R    PD       I  L +  RI KA KV  IMV  G
Sbjct: 191 LLRGYCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRG 250

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TYN+++  LCK G +R A+AL +EM   G  PDV+TYNT++  +    +   A+
Sbjct: 251 LEPNVVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAM 310

Query: 243 GFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           G  ++ ++      P ++T+  +I  +CK   + +AI V + MA  GC  ++VTYN L+ 
Sbjct: 311 GLLEEMIQGDTLVEPDVVTFNSVIHGLCKIGRMRQAISVREMMAERGCMCNLVTYNYLIG 370

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +  K + A+ +++ L+S G+EP+S TY+ L++        D  +  L  M +     
Sbjct: 371 GFLRVHKVNMAMNLMSELISSGLEPDSFTYSILINGFSKLWEVDRAEMFLRTMTQRGIRA 430

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +F Y  L+  LC+ G++++A+  FN+M   NC  D V Y+T++   CK G +  A QLL
Sbjct: 431 ELFHYIPLLAALCQLGMMEQAMVLFNEM-DMNCGLDAVAYSTMMYGACKSGDIKAAKQLL 489

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +     +P  +TY+ LI+  AK G +E+A  +  QM  +G  PD     +LI G+   
Sbjct: 490 QDMLDEGLAPDAVTYSILINMFAKLGDLEEAERVLKQMAASGFVPDVAVFDSLIKGYSAE 549

Query: 481 DQVEEAVDLLKEI 493
            Q+ + +DL+ E+
Sbjct: 550 GQINKILDLIHEM 562



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 70/290 (24%), Positives = 146/290 (50%), Gaps = 3/290 (1%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRID 166
           D   V  D  T N ++       ++  A  L++ M + + +  PD     ++I GL +I 
Sbjct: 282 DDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLEEMIQGDTLVEPDVVTFNSVIHGLCKIG 341

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           R+ +A  V ++M   G + + +TYN ++GG  +  ++  A+ L+ E+  SG EPD  TY+
Sbjct: 342 RMRQAISVREMMAERGCMCNLVTYNYLIGGFLRVHKVNMAMNLMSELISSGLEPDSFTYS 401

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++       +  +A  F +   ++G    L  Y  L+  +C+   + +A+ + ++M + 
Sbjct: 402 ILINGFSKLWEVDRAEMFLRTMTQRGIRAELFHYIPLLAALCQLGMMEQAMVLFNEMDMN 461

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
            C  D V Y++++  +CK G    A  ++ ++L  G+ P+++TY+ L++     G  +  
Sbjct: 462 -CGLDAVAYSTMMYGACKSGDIKAAKQLLQDMLDEGLAPDAVTYSILINMFAKLGDLEEA 520

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           +++L  M  +   P V  ++ LI G    G +++ ++  ++M +KN   D
Sbjct: 521 ERVLKQMAASGFVPDVAVFDSLIKGYSAEGQINKILDLIHEMRAKNVAID 570



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/244 (25%), Positives = 119/244 (48%), Gaps = 4/244 (1%)

Query: 326 NSITYNTLLHSLGSRG--CWDAVDKILDIMNEA--SHSPTVFTYNILINGLCKYGLVDRA 381
           ++++YN +L +L  RG     A+  + D+  EA  +  P   +Y +++ GLC     D A
Sbjct: 75  DAVSYNIVLAALCRRGGDLRQALSLLADMSREAHPAARPNAVSYTMVMRGLCASRRTDEA 134

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +     M +   + D+VTY T++  LC    L+ AL+LL  + GS   P +I Y+ L+ G
Sbjct: 135 VALLRSMQASGVRADVVTYGTLIRGLCDAAELDGALELLGEMCGSGVHPNVIVYSCLLRG 194

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             + G  +    ++ +M   G+ PD I     I   C+  ++ +AV +   + +RG +  
Sbjct: 195 YCRSGRWQDVSKVFEEMSRLGVEPDVIMFTGFIDDLCKKGRIGKAVKVKDIMVQRGLEPN 254

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y ++I+ LCK   V  A+ +   M      PD   ++T++  ++     + A  L +
Sbjct: 255 VVTYNVLINCLCKEGSVREALALRNEMDDKGVAPDVVTYNTLIAGLSGVLEMDGAMGLLE 314

Query: 562 KLIE 565
           ++I+
Sbjct: 315 EMIQ 318


>gi|296088147|emb|CBI35592.3| unnamed protein product [Vitis vinifera]
          Length = 883

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 130/439 (29%), Positives = 220/439 (50%), Gaps = 1/439 (0%)

Query: 128 CSRGKLTDASKLIDIMARR-NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           C R  L +A ++ + M++  N  P+      LI GL    R+E+A ++ Q MV  G  P 
Sbjct: 240 CRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS 299

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T TY +++   C  G    A+ +LDEM+   C P+V TY  ++  +   GK ++A G ++
Sbjct: 300 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 359

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             L+ G  P +IT+  LI   CK+  +  A ++L  M    C P+I TYN L+   C+  
Sbjct: 360 KMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVS 419

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K   A L++  ++  G+ P+ +TYN L+      G  +    I + MN A   P  FT+ 
Sbjct: 420 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 479

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI+GLCK G +++A      MV K    D VT+  ++   CK G   +   L   +  +
Sbjct: 480 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 539

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            C     T+N  +D L K   + +A  + G+MM+ G+ P  +TH  LI G CRA +   +
Sbjct: 540 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 599

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + +L+ + + G       Y ++I+GLC + +V+ A  +L  M S    P+   ++ +VK 
Sbjct: 600 LKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 659

Query: 547 VADDGMTEEAYKLWQKLIE 565
               G  + A+++   +++
Sbjct: 660 HVKAGRLDRAFQIVSTMVK 678



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 133/482 (27%), Positives = 214/482 (44%), Gaps = 57/482 (11%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T   +++  C  G    A K++D MA +  +P+ H    LI  L R  +IE+A+ V + 
Sbjct: 301 RTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRK 360

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT---------- 227
           M+  G  P  IT+N ++ G CK G + SA  LL  M    C+P++ TYN           
Sbjct: 361 MLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSK 420

Query: 228 ------ILRTMFDNGKFKQAI-------GFWKD-QLR-----------KGCPPYLITYTI 262
                 +LR + DNG     +       GF K+ QL             G  P   T+T 
Sbjct: 421 SYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTA 480

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI+ +CK   + +A  +L  M  +G S D VT+ +L++  CK GK  D   +  N++   
Sbjct: 481 LIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENR 540

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
               + T+N  L +LG     +  + +L  M +    P+V T+ ILI G C+ G    ++
Sbjct: 541 CLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSL 600

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
               +M    C P++ TY  ++  LC  G + EA  +L  ++    SP   TY  L+   
Sbjct: 601 KMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAH 660

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF-------------------CRADQV 483
            K G +++A  +   M++NG  P+   +  L+ GF                    R+   
Sbjct: 661 VKAGRLDRAFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSS 720

Query: 484 EEAVD--LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           EE  +  L  EI K G    +  Y  ++ GLCK  ++  A Q+ + M+     PD  + S
Sbjct: 721 EENDNNCLSNEIKKCGVPTED-LYNFLVVGLCKEGRIIEADQLTQDMVKHGLFPDKAISS 779

Query: 542 TI 543
            I
Sbjct: 780 II 781



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 182/397 (45%), Gaps = 1/397 (0%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  V + MV  G V   I Y  +V  LCK G +++A     ++   G   D     +++ 
Sbjct: 178 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 237

Query: 231 TMFDNGKFKQAIG-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                    +A   F K    + C P  +TY+ILI  +C+   +  A ++  +M  +GC 
Sbjct: 238 ANCRRDDLGEAFRVFEKMSKEENCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 297

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P   TY  L+   C  G  D A+ +++ + ++   PN  TY  L+  L   G  +  + +
Sbjct: 298 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 357

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M +    P + T+N LING CK G V  A    + M   NC+P+I TYN ++  LC+
Sbjct: 358 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 417

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
                +A  LL  +  +   P  +TYN L+DG  K+G +  A  ++  M   G+ PD  T
Sbjct: 418 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFT 477

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              LI G C+  ++E+A  +L  + K+G  +    +  +I G CK  K      + E M+
Sbjct: 478 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV 537

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            +R       F+  +  +  D    EA  +  K++++
Sbjct: 538 ENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 574



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 110/458 (24%), Positives = 203/458 (44%), Gaps = 55/458 (12%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  FC  G+L  A  + + M      PD      LI GL ++ R+E+A+ +L
Sbjct: 439 DRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGIL 498

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G   D +T+  ++ G CK G+ +    L + M  + C     T+N  L  +  +
Sbjct: 499 GSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKD 558

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  +A       ++ G  P ++T+TILIE  C+    A ++++L+ M   GCSP++ TY
Sbjct: 559 YKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTY 618

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             ++N  C  G+ ++A  ++ ++ S G+ PN  TY  L+ +    G  D   +I+  M +
Sbjct: 619 TIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 678

Query: 356 ASHSPTVFTYNILING--LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
               P    Y+ L++G  L    +  RA++S   + +++   +    N +   + K G+ 
Sbjct: 679 NGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCLSNEIKKCGVP 738

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            E L                 YN L+ GL K+G + +A  L   M+++G+ PD       
Sbjct: 739 TEDL-----------------YNFLVVGLCKEGRIIEADQLTQDMVKHGLFPD------- 774

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
                                         A   +I   CK+ K D  ++ ++L++ +++
Sbjct: 775 -----------------------------KAISSIIEHYCKTCKYDNCLEFMKLVLDNKF 805

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
            P    +  ++  + ++G  +EA KL   L+     E+
Sbjct: 806 VPSFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEE 843



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/221 (24%), Positives = 107/221 (48%), Gaps = 9/221 (4%)

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           LD M E     +   Y+ L+  L K  +   A   + +MV++      + Y TV+ ALCK
Sbjct: 147 LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 206

Query: 410 EGMLNEA----LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGIS 464
            G +  A     ++L L  G     C     +L+    ++  + +A  ++ +M  E    
Sbjct: 207 NGFVQAAEMFCCKVLRLGFGLDTHVC----TSLVLANCRRDDLGEAFRVFEKMSKEENCR 262

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P+ +T+  LI G C A ++EEA  L +E+ ++G +     Y ++I   C     D A+++
Sbjct: 263 PNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAMKM 322

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           L+ M +    P+   ++ ++ ++  +G  EEA  +++K+++
Sbjct: 323 LDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 363


>gi|356561387|ref|XP_003548963.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 520

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 133/474 (28%), Positives = 247/474 (52%), Gaps = 4/474 (0%)

Query: 95  TITKKSHDPSLPS----SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           ++ K  H P++ S     +   +  D  T + ++  FC  G++  +  ++  + +    P
Sbjct: 19  SLVKMKHYPTVISLSKQMEAKGIVPDLVTLSILINCFCHLGQMAFSFSVLGKILKLGYQP 78

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           +      L++GL     ++K+      +V  G   D ++Y +++ GLCK G+ R AI LL
Sbjct: 79  NTIILNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGILLNGLCKIGETRCAIKLL 138

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
             +      PDV+ Y+TI+  +  +    +A   + +   +G  P +ITYT LI   C  
Sbjct: 139 RTIEDRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLA 198

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             +  A  +L++M ++  +P+I TYN+L++  CK+GK  ++  ++  +  +G++P+ + Y
Sbjct: 199 GQLMEAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIY 258

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           + L+      G      +I  +M +   +P V++YNI+INGLCK   VD A+N   +M+ 
Sbjct: 259 SILMDGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLH 318

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           KN  PD VTY++++  LCK G +   L L   ++       L+TYN+L+DGL K   ++K
Sbjct: 319 KNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDK 378

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+ L+ +M E GI P+  T+  LI G C+  ++++   L + +  +G  +    Y ++I 
Sbjct: 379 AIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMIS 438

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           GLCK    D A+ +   M  +   P+   F  I++ + +    ++A KL  ++I
Sbjct: 439 GLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMI 492



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 209/421 (49%), Gaps = 12/421 (2%)

Query: 121 NKILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +++  C +G++  +    D ++A+  Q+    + I L+ GL +I     A K+L+ + 
Sbjct: 84  NTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYGI-LLNGLCKIGETRCAIKLLRTIE 142

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
                PD + Y+ ++ GLCK   +  A  L  EM+  G  PDVITY T++      G+  
Sbjct: 143 DRSTRPDVVMYSTIIDGLCKDKLVDEAYDLYSEMNARGIFPDVITYTTLICGFCLAGQLM 202

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A G   + + K   P + TY  LI+ +CK+  +  +  +L  M  +G  PD+V Y+ L+
Sbjct: 203 EAFGLLNEMILKNINPNIYTYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILM 262

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSRGCWDAVDKILDIMNEAS 357
           +  C  G+   A  +   ++  G+ P+  +YN +++ L  G R     VD+ ++++ E  
Sbjct: 263 DGYCLVGEVQKAKQIFLVMVQTGVNPDVYSYNIIINGLCKGKR-----VDEAMNLLREML 317

Query: 358 HS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           H    P   TY+ LI+GLCK G +   ++   +M  +    ++VTYN++L  LCK   L+
Sbjct: 318 HKNMIPDTVTYSSLIDGLCKLGRITTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLD 377

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A+ L   +      P   TY  LIDGL K G ++K   L+  ++  G   D  T+  +I
Sbjct: 378 KAIALFMKMKERGIQPNKYTYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMI 437

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+    +EA+ +  ++   G       + ++I  L +  + D A ++L  MI+    
Sbjct: 438 SGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLL 497

Query: 535 P 535
           P
Sbjct: 498 P 498



 Score =  135 bits (341), Expect = 5e-29,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 149/312 (47%), Gaps = 35/312 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK+ ++  L+ +M ++   PD      L+ G   +  ++KA ++  +M
Sbjct: 222 TYNTLIDTLCKEGKVKESKNLLAVMTKKGVKPDVVIYSILMDGYCLVGEVQKAKQIFLVM 281

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V +G  PD  +YN+++ GLCK  ++  A+ LL EM      PD +TY++++  +   G+ 
Sbjct: 282 VQTGVNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRI 341

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
              +   K+   +G P  L+TY  L++ +CK   + +AI +   M   G  P+  TY +L
Sbjct: 342 TTILDLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTAL 401

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G+      +  +LL +G                   C D              
Sbjct: 402 IDGLCKGGRLKKGQALFQHLLVKGY------------------CID-------------- 429

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              V+TY ++I+GLCK G+ D A+   ++M    C P+ VT+  ++ +L ++   ++A +
Sbjct: 430 ---VWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNAVTFEIIIRSLLEKDENDKAEK 486

Query: 419 LLHLLNGSSCSP 430
           LLH +      P
Sbjct: 487 LLHEMIAKGLLP 498



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 107/213 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  + N I+   C   ++ +A  L+  M  +N IPD     +LI GL ++ RI    
Sbjct: 286 VNPDVYSYNIIINGLCKGKRVDEAMNLLREMLHKNMIPDTVTYSSLIDGLCKLGRITTIL 345

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M   G   + +TYN ++ GLCK   +  AIAL  +M   G +P+  TY  ++  +
Sbjct: 346 DLTKEMHHRGQPANLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKYTYTALIDGL 405

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+ K+    ++  L KG    + TYT++I  +CK+     A+ +   M   GC P+ 
Sbjct: 406 CKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKMEDNGCIPNA 465

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
           VT+  ++    ++ + D A  +++ ++++G+ P
Sbjct: 466 VTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLP 498



 Score = 75.1 bits (183), Expect = 8e-11,   Method: Compositional matrix adjust.
 Identities = 45/163 (27%), Positives = 77/163 (47%), Gaps = 8/163 (4%)

Query: 94  LTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH 153
           L +TK+ H    P+        +  T N +L   C    L  A  L   M  R   P+ +
Sbjct: 345 LDLTKEMHHRGQPA--------NLVTYNSLLDGLCKNQNLDKAIALFMKMKERGIQPNKY 396

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
               LI GL +  R++K   + Q +++ G   D  TY +M+ GLCK G    A+A+  +M
Sbjct: 397 TYTALIDGLCKGGRLKKGQALFQHLLVKGYCIDVWTYTVMISGLCKEGMFDEALAMKSKM 456

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
             +GC P+ +T+  I+R++ +  +  +A     + + KG  P+
Sbjct: 457 EDNGCIPNAVTFEIIIRSLLEKDENDKAEKLLHEMIAKGLLPF 499


>gi|359485848|ref|XP_002267947.2| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Vitis vinifera]
          Length = 1011

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 223/462 (48%), Gaps = 1/462 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D +T + +++  C    +  A +L+D M +R   P       +I GL R   ++  +
Sbjct: 386 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 445

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ MVM+G  P+ + Y  ++    K G++  +  +L+ M   G  PDV  YN+++   
Sbjct: 446 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 505

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               + ++A  +  + L +   P   TY   I+   K   +  A    ++M   G  P++
Sbjct: 506 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 565

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y +L+   CK+G   +A  V   +LSR +  +  TY+ L+H L   G       I   
Sbjct: 566 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 625

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + E    P  FTYN LI+G CK G VD+A     +M  K   PDIVTYN ++  LCK G 
Sbjct: 626 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 685

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +  A  L   + G   +P  +TY  ++DG  K      A  L  +M+  G+ PD   +  
Sbjct: 686 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 745

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++   C+ ++ E+A+DL +E+ ++G      ++  +I G CKS K+  A  +LE MI  +
Sbjct: 746 ILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 804

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           + P+   +++++      GM  EA +LW ++ E  V     T
Sbjct: 805 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKT 846



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 220/447 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  F  +G +  A ++ D M       +      L+ G+ +  ++EKA +++Q M
Sbjct: 322 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 381

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD+ TY++++ G C+   +  A  LLDEM      P V+TY+ I+  +   G  
Sbjct: 382 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 441

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           +      ++ +  G  P  + YT L+    K+  +  +  +L+ M  +G  PD+  YNSL
Sbjct: 442 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 501

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK  + ++A   +  +L R + PN+ TY   +      G  +  D+  + M     
Sbjct: 502 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 561

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V  Y  LI G CK G V  A + F  ++S+    D+ TY+ ++  L + G ++EA  
Sbjct: 562 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 621

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   L      P   TYN+LI G  K+G ++KA  L  +M   GI+PD +T+  LI G C
Sbjct: 622 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 681

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A ++E A +L  +I  RG       Y  ++ G CKSK    A Q+LE M+     PD  
Sbjct: 682 KAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 741

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +++ I+     +   E+A  L+Q+++E
Sbjct: 742 IYNVILNFCCKEEKFEKALDLFQEMLE 768



 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 219/445 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L +     K+    K+ D M     +PD +   N+I    ++  ++ A +VL  M  
Sbjct: 184 NSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGE 243

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +TYN+++GGLC+   +  AI L   M   G  PD+ TY+ ++       + ++
Sbjct: 244 KGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSRE 303

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     + +  G  P  ITY  LI+   +Q  I +A  + D+M   G   +++ +N+L+N
Sbjct: 304 AKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLN 363

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK GK + A+ ++  ++ +G+EP+S TY+ L+             ++LD M +   +P
Sbjct: 364 GVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAP 423

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           TV TY+++INGLC+ G +        +MV    +P+ V Y T++ A  KEG + E+  +L
Sbjct: 424 TVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMIL 483

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P +  YN+LI G  K   ME+A     +M+E  + P+  T+   I G+ +A
Sbjct: 484 ERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKA 543

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++E A     E+   G       Y  +I G CK   V  A  V   ++S R   D   +
Sbjct: 544 GEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTY 603

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           S ++  ++ +G   EA+ ++ +L E
Sbjct: 604 SVLIHGLSRNGKMHEAFGIFSELQE 628



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/490 (27%), Positives = 229/490 (46%), Gaps = 36/490 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC   ++ +A   +  M  R   P+ H     I G  +   +E A +    M+ 
Sbjct: 499 NSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLS 558

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +P+   Y  ++ G CK G +  A ++   +       DV TY+ ++  +  NGK  +
Sbjct: 559 CGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHE 618

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A G + +   KG  P   TY  LI   CKQ  + +A ++L++M I+G +PDIVTYN L++
Sbjct: 619 AFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILID 678

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNT----------------LLHSLGSRGC-- 342
             CK G+ + A  + +++  RG+ PN +TY                  LL  +  RG   
Sbjct: 679 GLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPP 738

Query: 343 --------------WDAVDKILDI---MNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
                          +  +K LD+   M E   + TV ++N LI G CK G +  A +  
Sbjct: 739 DAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLL 797

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            +M+ K   P+ VTY +++   CK GM+ EA +L   +   +  P   TY +L+ G    
Sbjct: 798 EEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNI 857

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G M +   L+ +M+  GI PD +T+  +I  +CR   V EA  L  EI  +G  M  +AY
Sbjct: 858 GNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAY 917

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I  LCK ++    +++L  +  S ++      S I +     G  +EA ++ + +++
Sbjct: 918 DALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVK 977

Query: 566 WKVFEKGTTL 575
           +      T+L
Sbjct: 978 FGWVSNTTSL 987



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 217/421 (51%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P    C +L+  L++ +++E   KV   M     +PD  TY  M+   CK G ++ A  +
Sbjct: 178 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 237

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L EM   GC P+++TYN I+  +       +AI   +  + KG  P L TY ILI   C 
Sbjct: 238 LLEMGEKGCSPNLVTYNVIIGGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCM 297

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
           +     A  +L +M   G  P+ +TYN+L++   +QG  + A  + + +++ G+E N I 
Sbjct: 298 EKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLII 357

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           +NTLL+ +   G  +   +I+  M E    P   TY++LI G C+   + RA    ++M 
Sbjct: 358 WNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMK 417

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +   P ++TY+ ++  LC+ G L     +L  +  +   P  + Y TL+   AK+G +E
Sbjct: 418 KRKLAPTVLTYSVIINGLCRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVE 477

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           ++ ++  +M E GI PD   + +LI GFC+A ++EEA   L E+ +R  +     Y   I
Sbjct: 478 ESRMILERMREQGILPDVFCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFI 537

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            G  K+ ++++A +    M+S    P+  +++ +++    +G   EA+ +++ ++  +V 
Sbjct: 538 DGYSKAGEMEIADRYFNEMLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVL 597

Query: 570 E 570
           +
Sbjct: 598 Q 598



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/441 (25%), Positives = 214/441 (48%), Gaps = 1/441 (0%)

Query: 123  ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            +++  C  G +T+A  +   +  R  + D      LI GL R  ++ +A  +   +   G
Sbjct: 571  LIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSELQEKG 630

Query: 183  GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             +P+  TYN ++ G CK+G +  A  LL+EM + G  PD++TYN ++  +   G+ ++A 
Sbjct: 631  LLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGEIERAK 690

Query: 243  GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              + D   +G  P  +TY  +++  CK      A ++L++M + G  PD   YN ++NF 
Sbjct: 691  NLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNVILNFC 750

Query: 303  CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            CK+ K++ A+ +   +L +G   +++++NTL+      G     + +L+ M E    P  
Sbjct: 751  CKEEKFEKALDLFQEMLEKGF-ASTVSFNTLIEGYCKSGKLQEANHLLEEMIEKQFIPNH 809

Query: 363  FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             TY  LI+  CK G++  A   + +M  +N  P   TY ++L      G ++E   L   
Sbjct: 810  VTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNIGNMSEVSALFEE 869

Query: 423  LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
            +      P  +TY  +ID   ++G + +A  L  +++  G+      +  LI   C+ ++
Sbjct: 870  MVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMSVAAYDALIQALCKKEE 929

Query: 483  VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
              E + LL EIG+ G ++      ++  G   +  +D A +VL  M+   +  + T    
Sbjct: 930  FFEVLKLLNEIGESGFRLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGD 989

Query: 543  IVKKVADDGMTEEAYKLWQKL 563
            +V    +   +E++  L +++
Sbjct: 990  LVDGNQNGANSEDSDNLLKQM 1010



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 171/350 (48%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P+ + ++ ++ +    G   +A+  +         P L++   L+  + K   +    +V
Sbjct: 143 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 202

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
            D M      PD+ TY ++++  CK G   DA  V+  +  +G  PN +TYN ++  L  
Sbjct: 203 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLCR 262

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
               D   ++   M +    P ++TY+ILING C       A     +M+    +P+ +T
Sbjct: 263 ARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 322

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           YN ++    ++G + +A ++   +        LI +NTL++G+ K G MEKA+ +  +MM
Sbjct: 323 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 382

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           E G+ PD  T+  LI G CR   +  A +LL E+ KR        Y ++I+GLC+   + 
Sbjct: 383 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 442

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
               +L  M+ +  KP+  V++T++   A +G  EE+  + +++ E  + 
Sbjct: 443 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 492



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 193/411 (46%), Gaps = 13/411 (3%)

Query: 91   LRGLTITKKSHDPSLPSSDGPFVENDEK-------TNNKILQNFCSRGKLTDASKLIDIM 143
            + GL+   K H+     + G F E  EK       T N ++   C +G +  AS+L++ M
Sbjct: 607  IHGLSRNGKMHE-----AFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEM 661

Query: 144  ARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
              +   PD      LI GL +   IE+A  +   +   G  P+ +TY  MV G CK    
Sbjct: 662  CIKGINPDIVTYNILIDGLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNP 721

Query: 204  RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             +A  LL+EM + G  PD   YN IL       KF++A+  +++ L KG     +++  L
Sbjct: 722  TAAFQLLEEMLLRGVPPDAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFAS-TVSFNTL 780

Query: 264  IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
            IE  CK   +  A  +L++M  +   P+ VTY SL++ +CK G   +A  +   +  R +
Sbjct: 781  IEGYCKSGKLQEANHLLEEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNV 840

Query: 324  EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             P + TY +LLH   + G    V  + + M      P   TY ++I+  C+ G V  A  
Sbjct: 841  MPTAKTYTSLLHGYHNIGNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACK 900

Query: 384  SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              ++++ K     +  Y+ ++ ALCK+    E L+LL+ +  S     L T + +  G  
Sbjct: 901  LKDEILVKGMPMSVAAYDALIQALCKKEEFFEVLKLLNEIGESGFRLGLPTCSVIARGFQ 960

Query: 444  KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
              G M++A  +   M++ G   +  +   L+ G       E++ +LLK++ 
Sbjct: 961  IAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDNLLKQMA 1011



 Score =  121 bits (304), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 80/284 (28%), Positives = 147/284 (51%), Gaps = 8/284 (2%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           SP+ V ++ L++   K G   +AV V     +    P+ ++ N+LL  L      +   K
Sbjct: 142 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 201

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + D M      P V+TY  +I+  CK G V  A     +M  K C P++VTYN ++G LC
Sbjct: 202 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVIIGGLC 261

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK----AMVLYGQMMENGIS 464
           +  +L+EA++L   +      P L TY+ LI+G     CMEK    A ++  +M++ G+ 
Sbjct: 262 RARLLDEAIELKRSMVDKGLVPDLYTYDILINGF----CMEKRSREAKLMLLEMIDVGLK 317

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P+ IT+  LI GF R   +E+A  +  E+   G +     +  +++G+CK+ K++ A+++
Sbjct: 318 PEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEI 377

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++ M+    +PD   +S +++          A++L  ++ + K+
Sbjct: 378 MQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKL 421



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 42/176 (23%), Positives = 86/176 (48%)

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           S N  P+ V ++ ++ +  K G L EA+ +          P L++ N+L+  L K   +E
Sbjct: 138 SCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVE 197

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
               ++  M  + + PD  T+  +I   C+   V++A  +L E+G++G       Y ++I
Sbjct: 198 LFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKGCSPNLVTYNVII 257

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            GLC+++ +D AI++   M+     PD   +  ++     +  + EA  +  ++I+
Sbjct: 258 GGLCRARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMID 313


>gi|302772597|ref|XP_002969716.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
 gi|300162227|gb|EFJ28840.1| hypothetical protein SELMODRAFT_92207 [Selaginella moellendorffii]
          Length = 457

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 208/381 (54%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T++YN ++  L K G+        ++M  +GC P+  TY  +LR++    +F++A   ++
Sbjct: 17  TLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFR 76

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
               +GC P + +Y+ILI  +C+   +  A E+L++M   G  P++VTY SL++  CK G
Sbjct: 77  GMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMG 136

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K  +AV + + ++ RG  P+ + YN L+     +G      ++ + M E    PTVFTYN
Sbjct: 137 KLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYN 196

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L++G  + G   R  + F  M+ + C P+I T+N +L   CK G + EA +L   +   
Sbjct: 197 SLLSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSL 256

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            C P +++YNTL+ G+  KG   +A  L  +M+ +G+ PD +++  LI G+ ++  ++ A
Sbjct: 257 GCPPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHA 316

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + L  EI K G +    +Y  +I  LC++ KV  A  V + MI++   PD  V   +V  
Sbjct: 317 IKLFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIG 376

Query: 547 VADDGMTEEAYKLWQKLIEWK 567
           +       E+ +L+Q +++++
Sbjct: 377 LCRGERLTESCELFQAMVKFE 397



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 219/439 (49%), Gaps = 2/439 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           + N +L+     G+        + M     +P+ +    L+R L +  R E+A  V + M
Sbjct: 19  SYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGM 78

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+  +Y++++ GLC+  ++  A  LL+EM   G +P+V+TY ++L  +   GK 
Sbjct: 79  AAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKL 138

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A+  +   + +GCPP  + Y +LI+   K+  +  A  + ++M  +GC P + TYNSL
Sbjct: 139 KEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSL 198

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   ++G++     +  ++L +G  PN  T+N LL      G      ++   M     
Sbjct: 199 LSGFSRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGC 258

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V +YN L+ G+C  G    A     +M+     PDIV+YN ++    K G L+ A++
Sbjct: 259 PPDVVSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIK 318

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L + +  S   P   +Y+T+ID L + G +  A V++  M+ NG +PD      L+ G C
Sbjct: 319 LFYEIPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLC 378

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R +++ E+ +L + + K         Y L+++ LCK+K+ D   ++   +    + PD  
Sbjct: 379 RGERLTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVE 438

Query: 539 VFSTIVKKV--ADDGMTEE 555
           +   I++ +  +DD    E
Sbjct: 439 ISKVILETLRRSDDKEAAE 457



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 110/408 (26%), Positives = 211/408 (51%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+  L +  R +        M+ +G VP+T TY  ++  LC+  +   A ++   M+  G
Sbjct: 23  LLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRFEEARSVFRGMAAQG 82

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C P+V +Y+ ++  +    K  +A     + +  G  P ++TY  L+  +CK   +  A+
Sbjct: 83  CSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSLLSGLCKMGKLKEAV 142

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++   M   GC PD V YN L++   K+G   +A  +   +L +G  P   TYN+LL   
Sbjct: 143 DLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGCIPTVFTYNSLLSGF 202

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             +G +  V  +   M      P +FT+N L++G CK G +  A   F +M S  C PD+
Sbjct: 203 SRKGEFGRVQSLFKDMLRQGCVPNIFTFNNLLDGFCKMGDMVEAHRLFLEMRSLGCPPDV 262

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V+YNT++  +C +G  +EA +LL  +  S   P +++YN LIDG +K G ++ A+ L+ +
Sbjct: 263 VSYNTLMRGMCSKGKPHEAQRLLREMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYE 322

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           + ++G+ PD  ++ T+I   CRA +V  A  + K++   G+    +    ++ GLC+ ++
Sbjct: 323 IPKSGLEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGER 382

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +  + ++ + M+     P    ++ ++ K+     +++  +++ +L E
Sbjct: 383 LTESCELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTE 430



 Score = 99.0 bits (245), Expect = 7e-18,   Method: Compositional matrix adjust.
 Identities = 52/211 (24%), Positives = 103/211 (48%)

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           ++  ++    +YN L+  L K G  D    ++N M+   C P+  TY  +L +LC+    
Sbjct: 9   SQVHYNHGTLSYNYLLEVLAKSGRCDHVYGTYNDMLGAGCVPNTYTYGYLLRSLCQAQRF 68

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA  +   +    CSP + +Y+ LI GL +   +++A  L  +M++ G  P+ +T+ +L
Sbjct: 69  EEARSVFRGMAAQGCSPNVFSYSILIAGLCRGQKVDEAAELLNEMIDGGHQPNVVTYGSL 128

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           + G C+  +++EAVDL   +  RG       Y ++I G  K   +  A ++ E M+    
Sbjct: 129 LSGLCKMGKLKEAVDLFSRMVYRGCPPDGVVYNVLIDGFSKKGDMGEAYRLFEEMLEKGC 188

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            P    +++++   +  G       L++ ++
Sbjct: 189 IPTVFTYNSLLSGFSRKGEFGRVQSLFKDML 219



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 58/222 (26%), Positives = 93/222 (41%), Gaps = 35/222 (15%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N +++  CS+GK  +A +L                                   L
Sbjct: 261 DVVSYNTLMRGMCSKGKPHEAQRL-----------------------------------L 285

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+ SG  PD ++YN+++ G  K G +  AI L  E+  SG EPD  +Y+TI+  +   
Sbjct: 286 REMIRSGVGPDIVSYNILIDGYSKSGALDHAIKLFYEIPKSGLEPDAFSYSTIIDCLCRA 345

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A   +KD +  G  P       L+  +C+   +  + E+   M    C P I  Y
Sbjct: 346 GKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESCELFQAMVKFECVPLIPEY 405

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           N L+   CK  + DD   + + L  RG  P+      +L +L
Sbjct: 406 NLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 55/120 (45%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  + + I+   C  GK+  A  +   M      PD    I L+ GL R +R+ ++ 
Sbjct: 328 LEPDAFSYSTIIDCLCRAGKVGAAFVVFKDMIANGSAPDAAVVIPLVIGLCRGERLTESC 387

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ Q MV    VP    YN+++  LCK  +      +  E++  G  PDV     IL T+
Sbjct: 388 ELFQAMVKFECVPLIPEYNLLMYKLCKAKRSDDVCEIFHELTERGFSPDVEISKVILETL 447


>gi|302775071|ref|XP_002970952.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
 gi|300161663|gb|EFJ28278.1| hypothetical protein SELMODRAFT_441328 [Selaginella moellendorffii]
          Length = 698

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 141/462 (30%), Positives = 233/462 (50%), Gaps = 44/462 (9%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           KT+N +L   C  GK+  A    + + R   +    F I LI GL++   + +A  + Q 
Sbjct: 191 KTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSI-LINGLVKAGMMIQAHSLAQE 249

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
              +G   D  TY  +V  L K  +I+ A+AL+++++ +GC P + TYN +L  +   G+
Sbjct: 250 TTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGR 309

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCK---------------------------- 269
            ++AI   +  +  GC P ++TYT LI+ + K                            
Sbjct: 310 LEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTA 369

Query: 270 ------QCG-IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
                 Q G I +A  V   M   GC PD+VT +++++   K G+   AV +  ++ +RG
Sbjct: 370 LIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 429

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + PN + Y+ L+H L      D   ++L  M +A  +P   TYNILI+GLCK G V+ A 
Sbjct: 430 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 489

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             F++M+   C+PD+ TYN ++  LCK G  + A  +L  ++ S        Y++L+DGL
Sbjct: 490 AFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDMSSSR-----FVYSSLVDGL 544

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K G +E   +L+ +M  +G++ +  T   LI+  C+A++V+EAV L   I K G     
Sbjct: 545 CKSGKLEGGCMLFHEMERSGVA-NSQTRTRLIFHLCKANRVDEAVSLFNAIRKEGMP-HP 602

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            AY  +I  L KS KV+    V + M +  +KPD   ++ ++
Sbjct: 603 YAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALL 643



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 225/486 (46%), Gaps = 42/486 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +T N ++  +C   +  +A  +I     R    DF    +L    + +  + K+ KVL
Sbjct: 153 DVETWNVLITGYCLAREPEEAFAVI-----REMEEDFGVAPSLKTHNLVLHGLCKSGKVL 207

Query: 176 QIMVMSGGVPDTI-----TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
             M     V  ++     T+++++ GL K G +  A +L  E + +GC  D+ TY  I+ 
Sbjct: 208 AAMDHFEAVRRSMPVSAATFSILINGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVN 267

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +  N K ++A+   +     GC P + TY  L+  +CK   +  AI++L  +   GC+P
Sbjct: 268 WLAKNKKIQEAVALMEKITANGCTPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTP 327

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+VTY SL++   K+ +  +A  +   + SRG+  +++ Y  L+  L   G       + 
Sbjct: 328 DVVTYTSLIDGLGKEKRSFEAYKLFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVY 387

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M      P V T + +I+GL K G +  A+  F  M ++   P+ V Y+ ++  LCK 
Sbjct: 388 KTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKA 447

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             ++ AL++L  +  + C+P  ITYN LIDGL K G +E A   + +M+E G  PD  T+
Sbjct: 448 RKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTY 507

Query: 471 RTLIWGFCRADQVEEA-----------------VD-------------LLKEIGKRGNKM 500
             LI G C+A   + A                 VD             L  E+ + G   
Sbjct: 508 NILISGLCKAGNTDAACGVLDDMSSSRFVYSSLVDGLCKSGKLEGGCMLFHEMERSGVAN 567

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
             +  RL+ H LCK+ +VD A+ +    I     P    +++I+  +   G   E   ++
Sbjct: 568 SQTRTRLIFH-LCKANRVDEAVSLFN-AIRKEGMPHPYAYNSIISALIKSGKVNEGQAVY 625

Query: 561 QKLIEW 566
           Q++  W
Sbjct: 626 QEMTRW 631



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 129/455 (28%), Positives = 220/455 (48%), Gaps = 25/455 (5%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-----PDFHFCINLIRGLIRIDRIEKASK 173
           T N +L  F    +  +A  L+     +N++     PD      LI G       E+A  
Sbjct: 121 TGNALLDVFARTKRHREAGNLL-----KNELATIFRPDVETWNVLITGYCLAREPEEAFA 175

Query: 174 VLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAI----ALLDEMSVSGCEPDVITYNTI 228
           V++ M    GV P   T+N+++ GLCK G++ +A+    A+   M VS       T++ +
Sbjct: 176 VIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAA-----TFSIL 230

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +   G   QA    ++    GC   + TYT ++  + K   I  A+ +++ +   GC
Sbjct: 231 INGLVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGC 290

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P I TYN+L+N  CK G+ ++A+ ++  ++  G  P+ +TY +L+  LG         K
Sbjct: 291 TPTIATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYK 350

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M     +     Y  LI GL + G + +A + +  M S  C PD+VT +T++  L 
Sbjct: 351 LFKEMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLS 410

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G +  A+++   +     +P  + Y+ LI GL K   M+ A+ +  QM +   +PD I
Sbjct: 411 KAGRIGAAVRIFKSMEARGLAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTI 470

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  LI G C++  VE A     E+ + G K     Y ++I GLCK+   D A  VL+ M
Sbjct: 471 TYNILIDGLCKSGDVEAARAFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM 530

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            SSR+     V+S++V  +   G  E    L+ ++
Sbjct: 531 SSSRF-----VYSSLVDGLCKSGKLEGGCMLFHEM 560



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/320 (28%), Positives = 150/320 (46%), Gaps = 12/320 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++     GK+  AS +   M     +PD      +I GL +  RI  A ++ + M   G
Sbjct: 370 LIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAGRIGAAVRIFKSMEARG 429

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ + Y+ ++ GLCK  ++  A+ +L +M  + C PD ITYN ++  +  +G  + A 
Sbjct: 430 LAPNEVVYSALIHGLCKARKMDCALEMLAQMKKAFCTPDTITYNILIDGLCKSGDVEAAR 489

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            F+ + L  GC P + TY ILI  +CK      A  VLDDM     S     Y+SLV+  
Sbjct: 490 AFFDEMLEAGCKPDVYTYNILISGLCKAGNTDAACGVLDDM-----SSSRFVYSSLVDGL 544

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS--P 360
           CK GK +   ++ + +   G+  NS T   L+  L      + VD+ + + N       P
Sbjct: 545 CKSGKLEGGCMLFHEMERSGV-ANSQTRTRLIFHLCKA---NRVDEAVSLFNAIRKEGMP 600

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             + YN +I+ L K G V+     + +M ++  +PD VTYN +L  +     ++ A    
Sbjct: 601 HPYAYNSIISALIKSGKVNEGQAVYQEM-TRWWKPDRVTYNALLNGMIGANRMDRAHYYY 659

Query: 421 HLLNGSSCSPCLITYNTLID 440
             + G    P +   + L D
Sbjct: 660 LEMTGRGYVPPVSILHKLAD 679



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 149/312 (47%), Gaps = 35/312 (11%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG-SRGCWDA 345
           G    + T N+L++   +  ++ +A  ++ N L+    P+  T+N L+     +R   +A
Sbjct: 114 GFQHSVHTGNALLDVFARTKRHREAGNLLKNELATIFRPDVETWNVLITGYCLAREPEEA 173

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF-------------------- 385
              I ++  +   +P++ T+N++++GLCK G V  A++ F                    
Sbjct: 174 FAVIREMEEDFGVAPSLKTHNLVLHGLCKSGKVLAAMDHFEAVRRSMPVSAATFSILING 233

Query: 386 --------------NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
                          +  +  C  DI TY  ++  L K   + EA+ L+  +  + C+P 
Sbjct: 234 LVKAGMMIQAHSLAQETTTNGCTIDIHTYTAIVNWLAKNKKIQEAVALMEKITANGCTPT 293

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           + TYN L++GL K G +E+A+ L  ++++NG +PD +T+ +LI G  +  +  EA  L K
Sbjct: 294 IATYNALLNGLCKMGRLEEAIDLLRKIVDNGCTPDVVTYTSLIDGLGKEKRSFEAYKLFK 353

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           E+  RG  +    Y  +I GL ++ K+  A  V + M S    PD    ST++  ++  G
Sbjct: 354 EMASRGLALDTVCYTALIRGLLQTGKIPQASSVYKTMTSHGCVPDVVTLSTMIDGLSKAG 413

Query: 552 MTEEAYKLWQKL 563
               A ++++ +
Sbjct: 414 RIGAAVRIFKSM 425


>gi|152717462|dbj|BAF73723.1| pentatricopeptide repeat protein [Raphanus sativus]
          Length = 687

 Score =  220 bits (561), Expect = 1e-54,   Method: Compositional matrix adjust.
 Identities = 138/457 (30%), Positives = 227/457 (49%), Gaps = 12/457 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C   ++++A  L   M      P+      L+ GL R  RI +A  +L
Sbjct: 148 DVVTFNTLLHGLCVEDRVSEALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFD 234
             M+  G  P  ITY  +V G+CK G   SA+ LL +M  +S   P+V+ Y+ I+ ++  
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCK 267

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G+   A   + +   KG  P L TY  +I   C     + A ++L +M     SPD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N   K+GK+ +A  + + +L RG+ PN+ITY++++     +   DA + +  +M 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               SP + T+N LI+G C    +D  +   ++M       D  TYNT++      G LN
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-----------NGI 463
            AL LL  +  S   P ++T +TL+DGL   G ++ A+ ++  M +           NG+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD  T+  LI G     +  EA +L +E+  RG       Y  +I GLCK  ++D A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           + + M S  + P+   F+T++      G  ++  +L+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604



 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 220/457 (48%), Gaps = 12/457 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   I+   C  G    A  L+  M   + I P+      +I  L +  R   A  +   
Sbjct: 221 TYGTIVDGMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD  TYN M+ G C  G+   A  LL EM      PDV+TYN ++      GK
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A   + + L +G  P  ITY+ +I+  CKQ  +  A  +   MA +GCSP+++T+N+
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C   + DD + +++ +   G+  ++ TYNTL+H     G  +A   +L  M  + 
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-----------NCQPDIVTYNTVLGA 406
             P + T + L++GLC  G +  A+  F  M                +PD+ TYN ++  
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           L  EG   EA +L   +      P  ITY+++IDGL K+  +++A  ++  M     SP+
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T  TLI G+C+A +V++ ++L  E+G+RG       Y  +I G  K   ++ A+ + +
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            MISS   PD      ++  +      + A  + +KL
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/453 (28%), Positives = 224/453 (49%), Gaps = 13/453 (2%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDF-HFCINLIRGLIRIDRIEKASKVLQIMVM 180
           K+   F     L DA  L   M R   +P    FC  L+  ++R++R +    + Q M  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFC-KLMGVVVRMERPDLVISLYQKMER 107

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
                D  ++ +++   C   ++  A++   +++  G  PDV+T+NT+L  +    +  +
Sbjct: 108 KQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSE 167

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +       C P ++T+T L+  +C++  I  A+ +LD M  +G  P  +TY ++V+
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 301 FSCKQGKYDDAVLVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
             CK G   D V  ++  L R ME      PN + Y+ ++ SL   G       +   M 
Sbjct: 228 GMCKIG---DTVSALD--LLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E    P +FTYN +I G C  G    A     +M+ +   PD+VTYN ++ A  KEG   
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +L   +      P  ITY+++IDG  K+  ++ A  ++  M   G SP+ IT  TLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C A ++++ ++LL E+ + G     + Y  +IHG      ++ A+ +L+ MISS   
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           PD     T++  + D+G  ++A ++++ + + K
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 200/400 (50%), Gaps = 18/400 (4%)

Query: 112 FVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           F E  EK       T N ++  FCS G+ +DA +L+  M  R   PD      LI   ++
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             +  +A ++   M+  G +P+TITY+ M+ G CK+ ++ +A  +   M+  GC P++IT
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           +NT++       +    +    +    G      TY  LI        +  A+++L +M 
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-----------GMEPNSITYNTL 333
             G  PDIVT ++L++  C  GK  DA+ +   +              G+EP+  TYN L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L + G +   +++ + M      P   TY+ +I+GLCK   +D A   F+ M SK+ 
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P++VT+ T++   CK G +++ L+L   +         ITY TLI G  K G +  A+ 
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           ++ +M+ +G+ PD IT R ++ G    ++++ AV +L+++
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 206/410 (50%), Gaps = 1/410 (0%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           + L  G   I  +E A  +   M+ S  +P  + +  ++G + +  +    I+L  +M  
Sbjct: 48  LKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMER 107

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
                D+ ++  +++      K   A+  +    + G  P ++T+  L+  +C +  ++ 
Sbjct: 108 KQIRCDIYSFTILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFNTLLHGLCVEDRVSE 167

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ +   M    C P++VT+ +L+N  C++G+  +AV +++ ++  G++P  ITY T++ 
Sbjct: 168 ALNLFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 336 SLGSRGCWDAVDKILDIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            +   G   +   +L  M E SH  P V  Y+ +I+ LCK G    A N F +M  K   
Sbjct: 228 GMCKIGDTVSALDLLRKMEEISHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD+ TYN+++   C  G  ++A QLL  +     SP ++TYN LI+   K+G   +A  L
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y +M+  GI P+ IT+ ++I GFC+ ++++ A  +   +  +G       +  +I G C 
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +K++D  +++L  M  +    D T ++T++      G    A  L Q++I
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 11/319 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC + +L  A  +  +MA +   P+      LI G     RI+   ++L  M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G V DT TYN ++ G    G + +A+ LL EM  SG  PD++T +T+L  + DNGK 
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 239 KQAIGFWKDQLRK-----------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           K A+  +K   +            G  P + TY ILI  +  +     A E+ ++M   G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD +TY+S+++  CKQ + D+A  + +++ S+   PN +T+ TL++     G  D   
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M          TY  LI G  K G ++ A++ F +M+S    PD +T   +L  L
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661

Query: 408 CKEGMLNEALQLLHLLNGS 426
             +  L  A+ +L  L  S
Sbjct: 662 WSKEELKRAVAMLEKLQMS 680


>gi|356524104|ref|XP_003530672.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Glycine max]
          Length = 742

 Score =  220 bits (561), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 226/443 (51%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N IL   C  GK+ +A  L+  M  R  +PD      ++ G  +++++ K  K+++ +  
Sbjct: 256 NIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKVLKLMEELQR 315

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+  TYN ++  LCK G++  A  +L  M      PD + Y T++     +G    
Sbjct: 316 KGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSV 375

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               + +  RK   P  +TYT +I  +C+   +  A ++  +M  +G  PD VTY +L++
Sbjct: 376 EYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALID 435

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+  +A  + N ++ +G+ PN +TY  L+  L   G  D  +++L  M+E    P
Sbjct: 436 GYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQP 495

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN LINGLCK G +++A+    +M      PD +TY T++ A CK G + +A +LL
Sbjct: 496 NVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELL 555

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            ++      P ++T+N L++G    G +E    L   M++ GI P+  T  +L+  +C  
Sbjct: 556 RIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIR 615

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           + +   +++ K +  +G     + Y ++I G CK++ +  A  + + M+   +      +
Sbjct: 616 NNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASY 675

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           ++++K        EEA KL++++
Sbjct: 676 NSLIKGFYKRKKFEEARKLFEEM 698



 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 223/443 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+  +C   +L    KL++ + R+   P+ +   ++I  L +  R+ +A +VL++M    
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD + Y  ++ G  K G +     L DEM      PD +TY +++  +   GK  +A 
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + + L KG  P  +TYT LI+  CK   +  A  + + M  +G +P++VTY +LV+  
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G+ D A  +++ +  +G++PN  TYN L++ L   G  +   K+++ M+ A   P  
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY  +++  CK G + +A      M+ K  QP IVT+N ++   C  GML +  +L+  
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW 592

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   T+N+L+     +  M   + +Y  M   G+ PD  T+  LI G C+A  
Sbjct: 593 MLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKARN 652

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++EA  L KE+ ++G  +  ++Y  +I G  K KK + A ++ E M +  +  +  ++  
Sbjct: 653 MKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIYDI 712

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
            V    ++G  E   +L  + IE
Sbjct: 713 FVDVNYEEGNWENTLELCDEAIE 735



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 112/394 (28%), Positives = 197/394 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T N I+   C  G++ +A +++ +M  +   PD      LI G  +   +    K+ 
Sbjct: 321 NQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISGFGKSGNVSVEYKLF 380

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M     VPD +TY  M+ GLC+ G++  A  L  EM   G +PD +TY  ++      
Sbjct: 381 DEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPDEVTYTALIDGYCKA 440

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K+A       + KG  P ++TYT L++ +CK   +  A E+L +M+ +G  P++ TY
Sbjct: 441 GEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTY 500

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  CK G  + AV ++  +   G  P++ITY T++ +    G      ++L IM +
Sbjct: 501 NALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLD 560

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               PT+ T+N+L+NG C  G+++        M+ K   P+  T+N+++   C    +  
Sbjct: 561 KGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRA 620

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            +++   ++     P   TYN LI G  K   M++A  L+ +M+E G S    ++ +LI 
Sbjct: 621 TIEIYKGMHAQGVVPDTNTYNILIKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIK 680

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           GF +  + EEA  L +E+   G       Y + +
Sbjct: 681 GFYKRKKFEEARKLFEEMRTHGFIAEKEIYDIFV 714



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 104/373 (27%), Positives = 194/373 (52%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           IR+A  +  E S  G   + ++YN IL  +   GK K+A         +G  P +++Y++
Sbjct: 233 IRTAFRVFREYSEVGVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSV 292

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           +++  C+   + + +++++++  +G  P+  TYNS+++F CK G+  +A  V+  + ++ 
Sbjct: 293 IVDGYCQVEQLGKVLKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQR 352

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + P+++ Y TL+   G  G      K+ D M      P   TY  +I+GLC+ G V  A 
Sbjct: 353 IFPDNVVYTTLISGFGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEAR 412

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             F++M+SK  +PD VTY  ++   CK G + EA  L + +     +P ++TY  L+DGL
Sbjct: 413 KLFSEMLSKGLKPDEVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGL 472

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K G ++ A  L  +M E G+ P+  T+  LI G C+   +E+AV L++E+   G     
Sbjct: 473 CKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDT 532

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  ++   CK  ++  A ++L +M+    +P    F+ ++      GM E+  +L + 
Sbjct: 533 ITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKW 592

Query: 563 LIEWKVFEKGTTL 575
           +++  +    TT 
Sbjct: 593 MLDKGIMPNATTF 605



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/425 (28%), Positives = 214/425 (50%), Gaps = 1/425 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC-INLIRGLIRIDRIEKASKVLQIMVMS 181
             Q     G L +A KL D +     +     C + L R     D I  A +V +     
Sbjct: 187 FFQVLVEAGLLLEAGKLFDKLLNYGVLVSVDSCNLFLARLSNSFDGIRTAFRVFREYSEV 246

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   +T++YN+++  LC+ G+++ A +LL +M   G  PDV++Y+ I+       +  + 
Sbjct: 247 GVCWNTVSYNIILHLLCQLGKVKEAHSLLIQMEFRGNVPDVVSYSVIVDGYCQVEQLGKV 306

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   ++  RKG  P   TY  +I  +CK   +  A +VL  M  +   PD V Y +L++ 
Sbjct: 307 LKLMEELQRKGLKPNQYTYNSIISFLCKTGRVVEAEQVLRVMKNQRIFPDNVVYTTLISG 366

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             K G       + + +  + + P+ +TY +++H L   G      K+   M      P 
Sbjct: 367 FGKSGNVSVEYKLFDEMKRKKIVPDFVTYTSMIHGLCQAGKVVEARKLFSEMLSKGLKPD 426

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TY  LI+G CK G +  A +  NQMV K   P++VTY  ++  LCK G ++ A +LLH
Sbjct: 427 EVTYTALIDGYCKAGEMKEAFSLHNQMVEKGLTPNVVTYTALVDGLCKCGEVDIANELLH 486

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++     P + TYN LI+GL K G +E+A+ L  +M   G  PD IT+ T++  +C+  
Sbjct: 487 EMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEMDLAGFFPDTITYTTIMDAYCKMG 546

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ +A +LL+ +  +G +     + ++++G C S  ++   ++++ M+     P+ T F+
Sbjct: 547 EMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLIKWMLDKGIMPNATTFN 606

Query: 542 TIVKK 546
           +++K+
Sbjct: 607 SLMKQ 611



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 66/252 (26%), Positives = 120/252 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G++  A++L+  M+ +   P+      LI GL ++  IE+A K+++ M
Sbjct: 464 TYTALVDGLCKCGEVDIANELLHEMSEKGLQPNVCTYNALINGLCKVGNIEQAVKLMEEM 523

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            ++G  PDTITY  ++   CK G++  A  LL  M   G +P ++T+N ++     +G  
Sbjct: 524 DLAGFFPDTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGML 583

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           +      K  L KG  P   T+  L++Q C +  +   IE+   M  +G  PD  TYN L
Sbjct: 584 EDGERLIKWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNIL 643

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK     +A  +   ++ +G    + +YN+L+     R  ++   K+ + M     
Sbjct: 644 IKGHCKARNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGF 703

Query: 359 SPTVFTYNILIN 370
                 Y+I ++
Sbjct: 704 IAEKEIYDIFVD 715



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 44/197 (22%), Positives = 89/197 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+  +C  G++  A +L+ IM  +   P       L+ G      +E   +++
Sbjct: 531 DTITYTTIMDAYCKMGEMAKAHELLRIMLDKGLQPTIVTFNVLMNGFCMSGMLEDGERLI 590

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G +P+  T+N ++   C R  +R+ I +   M   G  PD  TYN +++     
Sbjct: 591 KWMLDKGIMPNATTFNSLMKQYCIRNNMRATIEIYKGMHAQGVVPDTNTYNILIKGHCKA 650

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              K+A    K+ + KG      +Y  LI+   K+     A ++ ++M   G   +   Y
Sbjct: 651 RNMKEAWFLHKEMVEKGFSLTAASYNSLIKGFYKRKKFEEARKLFEEMRTHGFIAEKEIY 710

Query: 296 NSLVNFSCKQGKYDDAV 312
           +  V+ + ++G +++ +
Sbjct: 711 DIFVDVNYEEGNWENTL 727


>gi|296085044|emb|CBI28459.3| unnamed protein product [Vitis vinifera]
          Length = 973

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 131/462 (28%), Positives = 223/462 (48%), Gaps = 1/462 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D +T + +++  C    +  A +L+D M +R   P       +I GL R   ++  +
Sbjct: 377 VEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQGTN 436

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ MVM+G  P+ + Y  ++    K G++  +  +L+ M   G  PDV  YN+++   
Sbjct: 437 AILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSLIIGF 496

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               + ++A  +  + L +   P   TY   I+   K   +  A    ++M   G  P++
Sbjct: 497 CKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGVLPNV 556

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y +L+   CK+G   +A  V   +LSR +  +  TY+ L+H L   G       I   
Sbjct: 557 GIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFGIFSE 616

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + E    P  FTYN LI+G CK G VD+A     +M  K   PDIVTYN ++  LCK G 
Sbjct: 617 LQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLCKAGE 676

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +  A  L   + G   +P  +TY  ++DG  K      A  L  +M+  G+ PD   +  
Sbjct: 677 IERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAFIYNV 736

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++   C+ ++ E+A+DL +E+ ++G      ++  +I G CKS K+  A  +LE MI  +
Sbjct: 737 ILNFCCKEEKFEKALDLFQEMLEKGFA-STVSFNTLIEGYCKSGKLQEANHLLEEMIEKQ 795

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           + P+   +++++      GM  EA +LW ++ E  V     T
Sbjct: 796 FIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKT 837



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 220/447 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  F  +G +  A ++ D M       +      L+ G+ +  ++EKA +++Q M
Sbjct: 313 TYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEM 372

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD+ TY++++ G C+   +  A  LLDEM      P V+TY+ I+  +   G  
Sbjct: 373 MEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNL 432

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           +      ++ +  G  P  + YT L+    K+  +  +  +L+ M  +G  PD+  YNSL
Sbjct: 433 QGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDVFCYNSL 492

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK  + ++A   +  +L R + PN+ TY   +      G  +  D+  + M     
Sbjct: 493 IIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLSCGV 552

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V  Y  LI G CK G V  A + F  ++S+    D+ TY+ ++  L + G ++EA  
Sbjct: 553 LPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHEAFG 612

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   L      P   TYN+LI G  K+G ++KA  L  +M   GI+PD +T+  LI G C
Sbjct: 613 IFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILIDGLC 672

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A ++E A +L  +I  RG       Y  ++ G CKSK    A Q+LE M+     PD  
Sbjct: 673 KAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPPDAF 732

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +++ I+     +   E+A  L+Q+++E
Sbjct: 733 IYNVILNFCCKEEKFEKALDLFQEMLE 759



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 224/485 (46%), Gaps = 44/485 (9%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC   ++ +A   +  M  R   P+ H     I G  +   +E A +    M+ 
Sbjct: 490 NSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNEMLS 549

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +P+   Y  ++ G CK G +  A ++   +       DV TY+ ++  +  NGK  +
Sbjct: 550 CGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGKMHE 609

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A G + +   KG  P   TY  LI   CKQ  + +A ++L++M I+G +PDIVTYN L++
Sbjct: 610 AFGIFSELQEKGLLPNAFTYNSLISGSCKQGNVDKASQLLEEMCIKGINPDIVTYNILID 669

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNT----------------LLHSLGSRGC-- 342
             CK G+ + A  + +++  RG+ PN +TY                  LL  +  RG   
Sbjct: 670 GLCKAGEIERAKNLFDDIEGRGLTPNCVTYAAMVDGYCKSKNPTAAFQLLEEMLLRGVPP 729

Query: 343 --------------WDAVDKILDI---MNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
                          +  +K LD+   M E   + TV ++N LI G CK G +  A +  
Sbjct: 730 DAFIYNVILNFCCKEEKFEKALDLFQEMLEKGFASTV-SFNTLIEGYCKSGKLQEANHLL 788

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            +M+ K   P+ VTY +++   CK GM+ EA +L   +   +  P   TY +L+ G    
Sbjct: 789 EEMIEKQFIPNHVTYTSLIDHNCKAGMMGEAKRLWLEMQERNVMPTAKTYTSLLHGYHNI 848

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G M +   L+ +M+  GI PD +T+  +I  +CR   V EA  L  EI  +G  M+ S +
Sbjct: 849 GNMSEVSALFEEMVAKGIEPDKMTYYVMIDAYCREGNVMEACKLKDEILVKGMPMK-SGF 907

Query: 506 RL-------VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           RL       +  G   +  +D A +VL  M+   +  + T    +V    +   +E++  
Sbjct: 908 RLGLPTCSVIARGFQIAGNMDEAAEVLRSMVKFGWVSNTTSLGDLVDGNQNGANSEDSDN 967

Query: 559 LWQKL 563
           L +++
Sbjct: 968 LLKQM 972



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/433 (27%), Positives = 206/433 (47%), Gaps = 17/433 (3%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA--- 206
           P    C +L+  L++ +++E   KV   M     +PD  TY  M+   CK G ++ A   
Sbjct: 187 PSLLSCNSLLGDLLKGNKVELFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV 246

Query: 207 -------IALLDE-------MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
                    LLDE       M   G  PD+ TY+ ++       + ++A     + +  G
Sbjct: 247 LLEMGEKARLLDEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVG 306

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P  ITY  LI+   +Q  I +A  + D+M   G   +++ +N+L+N  CK GK + A+
Sbjct: 307 LKPEPITYNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKAL 366

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            ++  ++ +G+EP+S TY+ L+             ++LD M +   +PTV TY+++INGL
Sbjct: 367 EIMQEMMEKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGL 426

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           C+ G +        +MV    +P+ V Y T++ A  KEG + E+  +L  +      P +
Sbjct: 427 CRCGNLQGTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGILPDV 486

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
             YN+LI G  K   ME+A     +M+E  + P+  T+   I G+ +A ++E A     E
Sbjct: 487 FCYNSLIIGFCKAKRMEEARTYLMEMLERRLRPNAHTYGAFIDGYSKAGEMEIADRYFNE 546

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +   G       Y  +I G CK   V  A  V   ++S R   D   +S ++  ++ +G 
Sbjct: 547 MLSCGVLPNVGIYTALIEGHCKEGNVTEAFSVFRFILSRRVLQDVQTYSVLIHGLSRNGK 606

Query: 553 TEEAYKLWQKLIE 565
             EA+ ++ +L E
Sbjct: 607 MHEAFGIFSELQE 619



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 88/350 (25%), Positives = 163/350 (46%), Gaps = 18/350 (5%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P+ + ++ ++ +    G   +A+  +         P L++   L+  + K   +    +V
Sbjct: 152 PNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWKV 211

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
            D M      PD+ TY ++++  CK G   DA  V   LL  G +   +           
Sbjct: 212 FDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRV---LLEMGEKARLL----------- 257

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
               D   ++   M +    P ++TY+ILING C       A     +M+    +P+ +T
Sbjct: 258 ----DEAIELKRSMVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPIT 313

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           YN ++    ++G + +A ++   +        LI +NTL++G+ K G MEKA+ +  +MM
Sbjct: 314 YNALIDGFMRQGDIEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMM 373

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           E G+ PD  T+  LI G CR   +  A +LL E+ KR        Y ++I+GLC+   + 
Sbjct: 374 EKGVEPDSQTYSLLIEGHCRGQNMARAFELLDEMKKRKLAPTVLTYSVIINGLCRCGNLQ 433

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
               +L  M+ +  KP+  V++T++   A +G  EE+  + +++ E  + 
Sbjct: 434 GTNAILREMVMNGLKPNAVVYTTLMTAHAKEGRVEESRMILERMREQGIL 483



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 58/266 (21%), Positives = 117/266 (43%), Gaps = 60/266 (22%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL----------- 407
           SP    +++L++   K G +  A+N F    +   +P +++ N++LG L           
Sbjct: 151 SPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVELFWK 210

Query: 408 ------------------------CKEG-----------------MLNEALQLLHLLNGS 426
                                   CK G                 +L+EA++L   +   
Sbjct: 211 VFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRSMVDK 270

Query: 427 SCSPCLITYNTLIDGLAKKGCMEK----AMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
              P L TY+ LI+G     CMEK    A ++  +M++ G+ P+ IT+  LI GF R   
Sbjct: 271 GLVPDLYTYDILINGF----CMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 326

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E+A  +  E+   G +     +  +++G+CK+ K++ A+++++ M+    +PD   +S 
Sbjct: 327 IEQAFRIKDEMVACGIEANLIIWNTLLNGVCKAGKMEKALEIMQEMMEKGVEPDSQTYSL 386

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           +++          A++L  ++ + K+
Sbjct: 387 LIEGHCRGQNMARAFELLDEMKKRKL 412



 Score = 56.2 bits (134), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 41/192 (21%), Positives = 86/192 (44%), Gaps = 17/192 (8%)

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           S N  P+ V ++ ++ +  K G L EA+ +          P L++ N+L+  L K   +E
Sbjct: 147 SCNGSPNSVIFDMLMDSYRKMGFLVEAVNVFLGPKNFEFRPSLLSCNSLLGDLLKGNKVE 206

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS------ 503
               ++  M  + + PD  T+  +I   C+   V++A  +L E+G++   +  +      
Sbjct: 207 LFWKVFDGMCAHKVLPDVYTYTNMISAHCKVGNVKDAKRVLLEMGEKARLLDEAIELKRS 266

Query: 504 -----------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
                       Y ++I+G C  K+   A  +L  MI    KP+   ++ ++      G 
Sbjct: 267 MVDKGLVPDLYTYDILINGFCMEKRSREAKLMLLEMIDVGLKPEPITYNALIDGFMRQGD 326

Query: 553 TEEAYKLWQKLI 564
            E+A+++  +++
Sbjct: 327 IEQAFRIKDEMV 338


>gi|357160857|ref|XP_003578899.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Brachypodium distachyon]
          Length = 714

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 135/437 (30%), Positives = 216/437 (49%), Gaps = 1/437 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T N ++     +G+L  A++L+DIM    +   F +   LI GL+  D +EKA  +L
Sbjct: 265 NDVTYNVVINGLARKGELEKAAQLVDIMRLSKKASAFTYN-PLITGLLARDFVEKAGALL 323

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G VP  +TYN ++ GL K G   +A    DEM   G  PD+ITYN+++      
Sbjct: 324 LEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEMRAKGLLPDLITYNSLINGYCKA 383

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  KQA+  + D  R G  P ++TY ILI+  C+   +  A  + ++M  E C PD+ TY
Sbjct: 384 GNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRLKEEMTEEDCLPDVCTY 443

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+N SC         +  + +LS+G+EP+   YNT + +  + G      ++ + M  
Sbjct: 444 TILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELTIGAITNAFQLREEMML 503

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              S    TYN+LI+GLCK G +  A   + +MV+   + D VTY  ++ A C+ G L E
Sbjct: 504 RGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIE 563

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  +   +  S  SP ++TY   I    ++G +  A   + +M+E G+ P+++T+  L+ 
Sbjct: 564 AKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMH 623

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             CR  + E A     E+ +RG       Y L+I G CK      AI++   M      P
Sbjct: 624 ALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHP 683

Query: 536 DDTVFSTIVKKVADDGM 552
           D    + + K   +  M
Sbjct: 684 DHCTHNALFKGFGEGHM 700



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 213/456 (46%), Gaps = 40/456 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ--IPDFHFCINLIRGLIRIDRIEK 170
           VE    T N +L +FC  G++  A  L+  M  R    +P+      +I GL R   +EK
Sbjct: 225 VEPSIFTYNTLLDSFCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEK 284

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A++++ IM +S       TYN ++ GL  R  +  A ALL EM   G  P V+TYNT++ 
Sbjct: 285 AAQLVDIMRLSKKA-SAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLI- 342

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV-LDDMAIEGCS 289
               +G FK                                G A A +V  D+M  +G  
Sbjct: 343 ----DGLFKT-------------------------------GNAEAAQVKFDEMRAKGLL 367

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD++TYNSL+N  CK G    A+ +  +L   G+ P  +TYN L+      G  +   ++
Sbjct: 368 PDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDLEGARRL 427

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            + M E    P V TY IL+NG C    +      F++M+SK  +PD   YNT + A   
Sbjct: 428 KEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTRISAELT 487

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G +  A QL   +     S   +TYN LIDGL K G ++ A VL+ +M+ +G+  D +T
Sbjct: 488 IGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVT 547

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  LI   C   ++ EA ++   +   G       Y + IH  C+   + +A      M+
Sbjct: 548 YTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKML 607

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               +P++  ++ ++  +   G TE AY+ + +++E
Sbjct: 608 EEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLE 643



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 119/410 (29%), Positives = 183/410 (44%), Gaps = 36/410 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++    +R  +  A  L+  M     +P       LI GL +    E A      M
Sbjct: 302 TYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVKFDEM 361

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +PD ITYN ++ G CK G ++ A+ L  ++  +G  P V+TYN ++      G  
Sbjct: 362 RAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCRLGDL 421

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVC---------------------KQC------ 271
           + A    ++   + C P + TYTIL+   C                       C      
Sbjct: 422 EGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFAYNTR 481

Query: 272 --------GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
                    I  A ++ ++M + G S D VTYN L++  CK G   DA ++   +++ G+
Sbjct: 482 ISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGL 541

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             + +TY  L+H+   RG       I D M  +  SP+V TY I I+  C+ G +  A  
Sbjct: 542 RLDCVTYTCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYG 601

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +M+ +  +P+ VTYN ++ ALC+ G    A Q  H +      P   TY  LIDG  
Sbjct: 602 WFRKMLEEGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSC 661

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           K+G    A+ LY +M + GI PD  TH  L  GF     + +AV  L+ +
Sbjct: 662 KEGNWVHAIRLYCEMHQKGIHPDHCTHNALFKGFGEG-HMYDAVQYLENV 710



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 175/360 (48%), Gaps = 3/360 (0%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           ++   EM+  G  P V   N +LR + D  ++      + D L+ G  P + TY  L++ 
Sbjct: 179 LSAFQEMARHGVAPFVKECNCVLRVLRDAARWDDMRAVYSDMLQLGVEPSIFTYNTLLDS 238

Query: 267 VCKQCGIARAIEVLDDMAIE--GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
            CK   + +A+ +L DM     GC P+ VTYN ++N   ++G+ + A  +++ ++    +
Sbjct: 239 FCKAGRMDQAVALLKDMEARAAGCLPNDVTYNVVINGLARKGELEKAAQLVD-IMRLSKK 297

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            ++ TYN L+  L +R   +    +L  M      PTV TYN LI+GL K G  + A   
Sbjct: 298 ASAFTYNPLITGLLARDFVEKAGALLLEMENEGIVPTVVTYNTLIDGLFKTGNAEAAQVK 357

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F++M +K   PD++TYN+++   CK G L +AL L   L  +   P ++TYN LIDG  +
Sbjct: 358 FDEMRAKGLLPDLITYNSLINGYCKAGNLKQALCLFGDLKRAGLGPTVLTYNILIDGYCR 417

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G +E A  L  +M E    PD  T+  L+ G C    +        E+  +G +    A
Sbjct: 418 LGDLEGARRLKEEMTEEDCLPDVCTYTILMNGSCMVRNLAMVRIFFDEMLSKGLEPDCFA 477

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y   I        +  A Q+ E M+      D   ++ ++  +   G  ++AY LW K++
Sbjct: 478 YNTRISAELTIGAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMV 537



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 62/223 (27%), Positives = 107/223 (47%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G +T+A +L + M  R    D      LI GL +   ++ A  +   MV  G   D +TY
Sbjct: 489 GAITNAFQLREEMMLRGISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTY 548

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
             ++   C+RG++  A  + D M  SG  P V+TY   + T    G    A G+++  L 
Sbjct: 549 TCLIHAHCERGRLIEAKNIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLE 608

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           +G  P  +TY +L+  +C+      A +   +M   G  P+  TY  L++ SCK+G +  
Sbjct: 609 EGVEPNEVTYNVLMHALCRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVH 668

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           A+ +   +  +G+ P+  T+N L    G    +DAV  + +++
Sbjct: 669 AIRLYCEMHQKGIHPDHCTHNALFKGFGEGHMYDAVQYLENVV 711



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/207 (28%), Positives = 94/207 (45%), Gaps = 1/207 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  T N ++   C  G L DA  L   M       D      LI       R+ +A 
Sbjct: 506 ISSDTVTYNVLIDGLCKTGSLKDAYVLWMKMVTDGLRLDCVTYTCLIHAHCERGRLIEAK 565

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   MV SG  P  +TY + +   C+RG +  A     +M   G EP+ +TYN ++  +
Sbjct: 566 NIFDGMVASGLSPSVVTYTIFIHTYCRRGNLYLAYGWFRKMLEEGVEPNEVTYNVLMHAL 625

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+ + A   + + L +G  P   TYT+LI+  CK+     AI +  +M  +G  PD 
Sbjct: 626 CRMGRTESAYQHFHEMLERGLVPNKYTYTLLIDGSCKEGNWVHAIRLYCEMHQKGIHPDH 685

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLL 319
            T+N+L      +G   DAV  + N++
Sbjct: 686 CTHNALFK-GFGEGHMYDAVQYLENVV 711


>gi|147866209|emb|CAN83683.1| hypothetical protein VITISV_017537 [Vitis vinifera]
          Length = 833

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 129/439 (29%), Positives = 219/439 (49%), Gaps = 1/439 (0%)

Query: 128 CSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           C R  L +A ++ + M++     P+      LI GL    R+E+A ++ Q MV  G  P 
Sbjct: 174 CRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPS 233

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T TY +++   C  G    A+ +LDEM+   C P+V TY  ++  +   GK ++A G ++
Sbjct: 234 TRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFR 293

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             L+ G  P +IT+  LI   CK+  +  A ++L  M    C P+I TYN L+   C+  
Sbjct: 294 KMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVS 353

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K   A L++  ++  G+ P+ +TYN L+      G  +    I + MN A   P  FT+ 
Sbjct: 354 KSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFT 413

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI+GLCK G +++A      MV K    D VT+  ++   CK G   +   L   +  +
Sbjct: 414 ALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVEN 473

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            C     T+N  +D L K   + +A  + G+MM+ G+ P  +TH  LI G CRA +   +
Sbjct: 474 RCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALS 533

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + +L+ + + G       Y ++I+GLC + +V+ A  +L  M S    P+   ++ +VK 
Sbjct: 534 LKMLERMKQAGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKA 593

Query: 547 VADDGMTEEAYKLWQKLIE 565
               G  + A+++   +++
Sbjct: 594 HVKAGRLDRAFQIVSTMVK 612



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 211/430 (49%), Gaps = 9/430 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G +  A +L+ +M + N  P+      L+ GL R+ +  KA  +L+ +
Sbjct: 306 TFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCRVSKSYKAFLLLRRV 365

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V +G +PD +TYN++V G CK GQ+  A  + + M+ +G EPD  T+  ++  +   G+ 
Sbjct: 366 VDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRL 425

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPDIVTY 295
           +QA G     ++KG     +T+T LI+  CK   I +A +V    ++M    C     T+
Sbjct: 426 EQANGILGSMVKKGISLDEVTFTALIDGHCK---IGKAKDVCFLFENMVENRCLTTAHTF 482

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N  ++   K  K ++A  ++  ++  G+ P+ +T+  L+      G      K+L+ M +
Sbjct: 483 NCFLDALGKDYKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQ 542

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A  SP V+TY I+INGLC  G V+ A      M S    P+  TY  ++ A  K G L+ 
Sbjct: 543 AGCSPNVYTYTIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDR 602

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDG--LAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           A Q++  +  + C P    Y+ L+ G  L+      +A+   G +    +S ++  +  L
Sbjct: 603 AFQIVSTMVKNGCQPNSHIYSALLSGFVLSNTAIGARALSSTGDLDARSLSSEENDNNCL 662

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
                R   V+ A+ +  EI K G    +  Y  ++ GLCK  ++  A Q+ + M+    
Sbjct: 663 SSHVFRLMDVDHALKIRDEIKKCGVPTED-LYNFLVVGLCKEGRIIEADQLTQDMVKHGL 721

Query: 534 KPDDTVFSTI 543
            PD  + S I
Sbjct: 722 FPDKAISSII 731



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 109/397 (27%), Positives = 182/397 (45%), Gaps = 1/397 (0%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  V + MV  G V   I Y  +V  LCK G +++A     ++   G   D     +++ 
Sbjct: 112 AFLVYRRMVNEGFVLGGIDYRTVVNALCKNGFVQAAEMFCCKVLRLGFGLDTHVCTSLVL 171

Query: 231 TMFDNGKFKQAIG-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                    +A   F K    + C P  +TY+ILI  +C+   +  A ++  +M  +GC 
Sbjct: 172 ANCRRDDLGEAFRVFEKMSKEESCRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQ 231

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P   TY  L+   C  G  D A+ +++ + ++   PN  TY  L+  L   G  +  + +
Sbjct: 232 PSTRTYTVLIKAKCDIGMTDKAMKMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGV 291

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M +    P + T+N LING CK G V  A    + M   NC+P+I TYN ++  LC+
Sbjct: 292 FRKMLKHGLCPGIITFNALINGYCKEGWVVSAFQLLSVMEKGNCKPNIRTYNELMEGLCR 351

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
                +A  LL  +  +   P  +TYN L+DG  K+G +  A  ++  M   G+ PD  T
Sbjct: 352 VSKSYKAFLLLRRVVDNGLLPDRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFT 411

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              LI G C+  ++E+A  +L  + K+G  +    +  +I G CK  K      + E M+
Sbjct: 412 FTALIDGLCKLGRLEQANGILGSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMV 471

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            +R       F+  +  +  D    EA  +  K++++
Sbjct: 472 ENRCLTTAHTFNCFLDALGKDYKLNEANAMLGKMMKY 508



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/456 (24%), Positives = 208/456 (45%), Gaps = 35/456 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  FC  G+L  A  + + M      PD      LI GL ++ R+E+A+ +L
Sbjct: 373 DRVTYNILVDGFCKEGQLNMAFNIFNSMNSAGLEPDGFTFTALIDGLCKLGRLEQANGIL 432

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G   D +T+  ++ G CK G+ +    L + M  + C     T+N  L  +  +
Sbjct: 433 GSMVKKGISLDEVTFTALIDGHCKIGKAKDVCFLFENMVENRCLTTAHTFNCFLDALGKD 492

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  +A       ++ G  P ++T+TILIE  C+    A ++++L+ M   GCSP++ TY
Sbjct: 493 YKLNEANAMLGKMMKYGLVPSVVTHTILIEGHCRAGETALSLKMLERMKQAGCSPNVYTY 552

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             ++N  C  G+ ++A  ++ ++ S G+ PN  TY  L+ +    G  D   +I+  M +
Sbjct: 553 TIIINGLCNNGRVEEAETILFSMSSFGVSPNHFTYAVLVKAHVKAGRLDRAFQIVSTMVK 612

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    Y+ L++G                          V  NT +GA         
Sbjct: 613 NGCQPNSHIYSALLSGF-------------------------VLSNTAIGA--------R 639

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL     L+  S S      N L   + +   ++ A+ +  ++ + G+  +D+ +  L+ 
Sbjct: 640 ALSSTGDLDARSLSSEENDNNCLSSHVFRLMDVDHALKIRDEIKKCGVPTEDL-YNFLVV 698

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  ++ EA  L +++ K G    + A   +I   CK+ K D  ++ ++L++ +++ P
Sbjct: 699 GLCKEGRIIEADQLTQDMVKHG-LFPDKAISSIIEHYCKTCKYDNCLEFMKLVLDNKFVP 757

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
               +  ++  + ++G  +EA KL   L+     E+
Sbjct: 758 SFASYCWVIHGLRNEGRVQEAQKLVSDLVRHTGIEE 793



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 13/223 (5%)

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           LD M E     +   Y+ L+  L K  +   A   + +MV++      + Y TV+ ALCK
Sbjct: 81  LDGMTELGFRLSYPCYSTLLMCLAKLNMGFVAFLVYRRMVNEGFVLGGIDYRTVVNALCK 140

Query: 410 EGMLNEA-------LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
            G +  A       L+L   L+   C+  L+  N   D L      E   V      E  
Sbjct: 141 NGFVQAAEMFCCKVLRLGFGLDTHVCTS-LVLANCRRDDLG-----EAFRVFEKMSKEES 194

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             P+ +T+  LI G C A ++EEA  L +E+ ++G +     Y ++I   C     D A+
Sbjct: 195 CRPNSVTYSILIHGLCEAGRLEEAFQLKQEMVEKGCQPSTRTYTVLIKAKCDIGMTDKAM 254

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++L+ M +    P+   ++ ++ ++  +G  EEA  +++K+++
Sbjct: 255 KMLDEMATKACVPNVHTYTILIDRLCREGKIEEANGVFRKMLK 297


>gi|357118714|ref|XP_003561096.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At5g39710-like [Brachypodium distachyon]
          Length = 718

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 229/458 (50%), Gaps = 18/458 (3%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGL-IRIDRIEKASKVLQIMVMSGGVPDT 187
           S   L  A +L+  M R    P+ +    L+R L  R  R E    V   M  +G  P+ 
Sbjct: 131 SDASLPSARRLLASMLRDGVAPNVYTYNILVRALCARGQREEALGVVGDDMRGAGCAPNV 190

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +TYN +V   C+ G++ +A  L+  M   G  P ++T+NT++  +   G+ + A   + +
Sbjct: 191 VTYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDE 250

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
             R+G  P  ++Y  L+   CK   +  A+ V  +MA +G  PD+VT+ SL++  C+ G 
Sbjct: 251 MAREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGN 310

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            + AV ++  +  RG+  N  T+  L+      G  D     +  M E    P+V  YN+
Sbjct: 311 LERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNV 370

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING CK G +D A    ++M +K  +PD+VTY+T+L   CK G  + A +L   +    
Sbjct: 371 LINGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKG 430

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P  ITY++LI GL ++  +  A  L+ +M++ G+ PD+ T+ TLI G C+   V++A+
Sbjct: 431 VVPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKAL 490

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS------ 541
            L  E+ K+G       Y ++I GL KS +   A ++L  +      PD+  +       
Sbjct: 491 SLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMHCC 550

Query: 542 ---------TIVKKVADDGMTEEAYKLWQKLIE--WKV 568
                     ++K  +  G+  +A K++Q +++  WK+
Sbjct: 551 RTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKL 588



 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 132/462 (28%), Positives = 229/462 (49%), Gaps = 17/462 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC  G++  A +L+ +M      P       ++ GL +  R+E A K+   M
Sbjct: 192 TYNTLVAAFCRAGEVDAAERLVGVMREGGVRPSLVTFNTVVNGLCKAGRMEDARKMFDEM 251

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD ++YN +V G CK G +  A+A+  EM+  G  PDV+T+ +++  M   G  
Sbjct: 252 AREGLTPDGVSYNTLVSGYCKAGCLHEALAVFAEMAQKGVVPDVVTFTSLIHAMCRAGNL 311

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+        +G      T+T LI+  C+   +  A+  + +M      P +V YN L
Sbjct: 312 ERAVALVGQMRERGLRMNEFTFTALIDGFCRNGFLDDALLAMKEMRECRIQPSVVCYNVL 371

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G+ D+A  +I+ + ++GM+P+ +TY+T+L      G  D+  ++   M +   
Sbjct: 372 INGYCKLGRMDEARELIHEMEAKGMKPDVVTYSTILSGYCKIGDTDSAFELNRKMLKKGV 431

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY+ LI GLC+   +  A   F +M+    QPD  TY T++   CKEG + +AL 
Sbjct: 432 VPDAITYSSLIRGLCEERRLGDACELFEKMLQLGLQPDEFTYTTLIDGHCKEGNVQKALS 491

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P ++TY+ LIDGL+K    ++A  L  ++      PD+I +  L+   C
Sbjct: 492 LHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQRLLFKLYYEDPVPDNIKYEALMH-CC 550

Query: 479 RADQVEEAVDLLKEIGKRGN----------------KMRNSAYRLVIHGLCKSKKVDMAI 522
           R  + +  V LLK    +G                 K+  S Y ++IHG C+   +  A+
Sbjct: 551 RTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDRHWKLDGSVYSVLIHGHCRGGNIMKAL 610

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              + ++   + P+ T   ++V+ + ++GMT EA  + Q+L+
Sbjct: 611 SFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEADNVIQELL 652



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 50/211 (23%), Positives = 91/211 (43%), Gaps = 19/211 (9%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ DE T   ++   C  G +  A  L D M ++  +PD      LI GL +  R ++A 
Sbjct: 466 LQPDEFTYTTLIDGHCKEGNVQKALSLHDEMIKKGVLPDVVTYSVLIDGLSKSARTKEAQ 525

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC-------------- 218
           ++L  +     VPD I Y  ++   C+  + +S +ALL   S+ G               
Sbjct: 526 RLLFKLYYEDPVPDNIKYEALM-HCCRTAEFKSVVALLKGFSMKGLMNQADKVYQSMLDR 584

Query: 219 --EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
             + D   Y+ ++      G   +A+ F K  LR G  P   +   L+  + ++     A
Sbjct: 585 HWKLDGSVYSVLIHGHCRGGNIMKALSFHKQLLRCGFSPNSTSTISLVRGLFEEGMTVEA 644

Query: 277 IEVLDDMAIEGCS-PDIVTYNSLVNFSCKQG 306
             V+ ++ +  CS  D  T  +L++ + K+G
Sbjct: 645 DNVIQEL-LNCCSLADAETSKALIDLNRKEG 674


>gi|221554580|gb|ACM24117.1| PPR protein [Raphanus sativus]
          Length = 688

 Score =  220 bits (560), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 148/509 (29%), Positives = 239/509 (46%), Gaps = 51/509 (10%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L   C   ++++A      M      P+      L+ GL R  RI +A  +L
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFD 234
             M+  G  P  ITY  +V G+CK+G   SA+ LL +M  VS   P+V+ Y+ I+ ++  
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G+   A   + +   KG  P L TY  +I   C     + A ++L +M     SPD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N   K+GK+ +A  + + +L RG+ PN+ITYN+++     +   DA + +  +M 
Sbjct: 328 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 387

Query: 355 EASHSPTVFT-----------------------------------YNILINGLCKYGLVD 379
               SP VFT                                   YN LI+G C  G ++
Sbjct: 388 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 447

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-------------HLLNGS 426
            A++   QM+S    PDIVT NT+L  LC  G L +AL++              H  NG 
Sbjct: 448 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG- 506

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P ++TYN LI GL  +G   +A  LY +M   GI PD IT+ ++I G C+  +++EA
Sbjct: 507 -VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 565

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             +   +G +        +  +I+G CK+ +VD  +++   M       D  ++ T++  
Sbjct: 566 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 625

Query: 547 VADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
               G    A  ++Q++I   V+    T+
Sbjct: 626 FRKVGNINGALDIFQEMISSGVYPDTITI 654



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 137/487 (28%), Positives = 223/487 (45%), Gaps = 47/487 (9%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++ FCS  KL  A      + +    PD      L+ GL   DR+ +A      M  
Sbjct: 118 NILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSEALDFFHQMFE 177

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +   P+ +T+  ++ GLC+ G+I  A+ALLD M   G +P  ITY TI+  M   G    
Sbjct: 178 TTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVDGMCKKGDTVS 237

Query: 241 AIGFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           A+   +         P ++ Y+ +I+ +CK    + A  +  +M  +G  PD+ TYNS++
Sbjct: 238 ALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIFPDLFTYNSMI 297

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C  G++ DA  ++  +L R + P+ +TYN L+++    G +    ++ D M      
Sbjct: 298 VGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAAELYDEMLPRGII 357

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI---------------------- 397
           P   TYN +I+G CK   +D A + F  M +K C PD+                      
Sbjct: 358 PNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMEL 417

Query: 398 -------------VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
                        VTYNT++   C  G LN AL L   +  S   P ++T NTL+DGL  
Sbjct: 418 LHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCD 477

Query: 445 KGCMEKAMVLYGQMME-----------NGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            G ++ A+ ++  M +           NG+ PD +T+  LI G     +  EA +L +E+
Sbjct: 478 NGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEM 537

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
             RG       Y  +I GLCK  ++D A Q+   M S  + P+   F+T++      G  
Sbjct: 538 PHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRV 597

Query: 554 EEAYKLW 560
           ++  +L+
Sbjct: 598 DDGLELF 604



 Score =  211 bits (537), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 227/454 (50%), Gaps = 13/454 (2%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDF-HFCINLIRGLIRIDRIEKASKVLQIMVM 180
           K+   F     L DA  L   M R   +P    FC  L+  ++R++R +    + Q M  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFC-KLMGVVVRMERPDLVISLYQKMER 107

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
                D  ++N+++   C   ++  A++   +++  G  PDV+T+ T+L  +    +  +
Sbjct: 108 KQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSE 167

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+ F+       C P ++T+T L+  +C++  I  A+ +LD M  +G  P  +TY ++V+
Sbjct: 168 ALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 301 FSCKQGKYDDAVLVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
             CK+G   D V  +N  L R ME      PN + Y+ ++ SL   G       +   M 
Sbjct: 228 GMCKKG---DTVSALN--LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E    P +FTYN +I G C  G    A     +M+ +   PD+VTYN ++ A  KEG   
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +L   +      P  ITYN++IDG  K+  ++ A  ++  M   G SPD  T  TLI
Sbjct: 343 EAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLI 402

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C A ++++ ++LL E+ +RG       Y  +IHG C    ++ A+ + + MISS   
Sbjct: 403 DGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVC 462

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           PD    +T++  + D+G  ++A ++++ + + K+
Sbjct: 463 PDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 496



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 139/467 (29%), Positives = 221/467 (47%), Gaps = 48/467 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   I+   C +G    A  L+  M   + I P+      +I  L +  R   A  +   
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD  TYN M+ G C  G+   A  LL EM      PDV+TYN ++      GK
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A   + + L +G  P  ITY  +I+  CKQ  +  A ++   MA +GCSPD+ T+ +
Sbjct: 341 FFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTT 400

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS-----------------LGSR 340
           L++  C   + DD + +++ +  RG+  N++TYNTL+H                  + S 
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSG 460

Query: 341 GCWDAVD------------KILDIMN------------EASH-----SPTVFTYNILING 371
            C D V             K+ D +             +ASH      P V TYNILI G
Sbjct: 461 VCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICG 520

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           L   G    A   + +M  +   PD +TY++++  LCK+  L+EA Q+   +   S SP 
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPN 580

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           ++T+NTLI+G  K G ++  + L+ +M   GI  D I + TLI+GF +   +  A+D+ +
Sbjct: 581 VVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALDIFQ 640

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE-LMISSRYKPDD 537
           E+   G        R ++ G    ++++ A+ +LE L +S  Y+ +D
Sbjct: 641 EMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVGYQLED 687



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/400 (29%), Positives = 202/400 (50%), Gaps = 18/400 (4%)

Query: 112 FVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           F E  EK       T N ++  FCS G+ +DA +L+  M  R   PD      LI   ++
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             +  +A+++   M+  G +P+TITYN M+ G CK+ ++ +A  +   M+  GC PDV T
Sbjct: 338 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 397

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           + T++       +    +    +  R+G     +TY  LI   C    +  A+++   M 
Sbjct: 398 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 457

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-----------GMEPNSITYNTL 333
             G  PDIVT N+L++  C  GK  DA+ +   +              G+EP+ +TYN L
Sbjct: 458 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 517

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L + G +   +++ + M      P   TY+ +I+GLCK   +D A   F  M SK+ 
Sbjct: 518 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF 577

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P++VT+NT++   CK G +++ L+L   +         I Y TLI G  K G +  A+ 
Sbjct: 578 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALD 637

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           ++ +M+ +G+ PD IT R ++ GF   +++E AV +L+++
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 677


>gi|357473123|ref|XP_003606846.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355507901|gb|AES89043.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 624

 Score =  219 bits (559), Expect = 2e-54,   Method: Compositional matrix adjust.
 Identities = 132/441 (29%), Positives = 232/441 (52%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L  +C   K  +A + +++M     IP    C +L+  L+++++I+ A  V + MV   
Sbjct: 153 LLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMN 212

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
                +T+N+M+  LC+ G+ + A   +  M V G +P+V+TYNT++      GKF+ A 
Sbjct: 213 IKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAAS 272

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +K    K   P   TY   I ++CK+  I  A  VL  +   G  P+ VTYN+L++  
Sbjct: 273 KIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGC 332

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +G  D A    + +++RG+  +  TYN L+H+L      +  + ++  M E    P V
Sbjct: 333 CNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDV 392

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYNI ING C+ G   +A++ F++MV KN +P + TY +++    K   ++EA +    
Sbjct: 393 VTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKK 452

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
                  P +I +N LIDG    G +++A  L  +M    + PD++T  TL+ G+CR  +
Sbjct: 453 SIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERK 512

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEEA  LL E+ +RG K  + +Y  +I G  K   +  A++V + M+S  + P    ++ 
Sbjct: 513 VEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTLLTYNA 572

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           +++  +  G  + A +L +++
Sbjct: 573 LIQGYSKIGEADHAEELLREM 593



 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 188/371 (50%), Gaps = 2/371 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C RGK   ASK+   M  +N  PD +   + I  L +  RIE+AS VL  +
Sbjct: 254 TYNTVINGYCLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKL 313

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + SG VP+ +TYN ++ G C +G +  A A  DEM   G    V TYN ++  +F   + 
Sbjct: 314 LESGLVPNAVTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRI 373

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA-RAIEVLDDMAIEGCSPDIVTYNS 297
           ++A    K+   KG  P ++TY I I   C+ CG A +A+ + D+M  +   P + TY S
Sbjct: 374 EEAEDMIKEMREKGVEPDVVTYNIQINGYCR-CGNAKKALSLFDEMVEKNIRPTVETYTS 432

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++   K+ +  +A       +  GM P+ I +N L+      G  D   ++L  M+ A 
Sbjct: 433 LIDVFGKRNRMSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAK 492

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   T+N L+ G C+   V+ A    ++M  +  +PD ++YNT++    K G + +AL
Sbjct: 493 VVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDAL 552

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++   +      P L+TYN LI G +K G  + A  L  +M   GI+PDD T+  +I   
Sbjct: 553 EVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAM 612

Query: 478 CRADQVEEAVD 488
              D + E  D
Sbjct: 613 KTNDDLVENDD 623



 Score =  168 bits (425), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 201/407 (49%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+    +  + ++A + L +M  +  +P T T N ++  L K  +I+ A  + +EM    
Sbjct: 153 LLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAWFVYEEMVKMN 212

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +  ++T+N ++  +   GK+K+A  F       G  P ++TY  +I   C +     A 
Sbjct: 213 IKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGYCLRGKFEAAS 272

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++   M  +   PD  TYNS ++  CK+ + ++A  V+  LL  G+ PN++TYN L+   
Sbjct: 273 KIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNAVTYNALIDGC 332

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            ++G  D      D M       +VFTYN+LI+ L     ++ A +   +M  K  +PD+
Sbjct: 333 CNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKEMREKGVEPDV 392

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTYN  +   C+ G   +AL L   +   +  P + TY +LID   K+  M +A   + +
Sbjct: 393 VTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAEEKFKK 452

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
            ++ G+ PD I    LI G C    ++ A  LLKE+           +  ++ G C+ +K
Sbjct: 453 SIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGYCRERK 512

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           V+ A ++L+ M     KPD   ++T++   +  G  ++A +++ +++
Sbjct: 513 VEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEML 559



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 98/383 (25%), Positives = 197/383 (51%)

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V  T+ +++++   C+  +   A+  L+ M  +   P   T N++L  +    K K A 
Sbjct: 143 NVKTTLVFDLLLSAYCQFRKPDEALECLNLMKENEIIPKTETCNSLLSLLLKLNKIKMAW 202

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +++ ++      ++T+ I+I  +C++    +A + +  M + G  P++VTYN+++N  
Sbjct: 203 FVYEEMVKMNIKSSIVTFNIMINILCREGKWKKAKDFIGHMEVYGVKPNVVTYNTVINGY 262

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +GK++ A  +   +  + ++P+  TYN+ +  L      +    +L  + E+   P  
Sbjct: 263 CLRGKFEAASKIFKTMKDKNLKPDCYTYNSFISRLCKERRIEEASGVLCKLLESGLVPNA 322

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN LI+G C  G +D+A    ++M+++     + TYN ++ AL  E  + EA  ++  
Sbjct: 323 VTYNALIDGCCNKGDLDKAFAYRDEMMNRGIVASVFTYNLLIHALFLEKRIEEAEDMIKE 382

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P ++TYN  I+G  + G  +KA+ L+ +M+E  I P   T+ +LI  F + ++
Sbjct: 383 MREKGVEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNR 442

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + EA +  K+  K G       +  +I G C +  +D A Q+L+ M +++  PD+  F+T
Sbjct: 443 MSEAEEKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNT 502

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           +++    +   EEA KL  ++ E
Sbjct: 503 LMQGYCRERKVEEAKKLLDEMKE 525



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 65/227 (28%), Positives = 111/227 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N  +  +C  G    A  L D M  +N  P      +LI    + +R+ +A 
Sbjct: 388 VEPDVVTYNIQINGYCRCGNAKKALSLFDEMVEKNIRPTVETYTSLIDVFGKRNRMSEAE 447

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +  +  +  G +PD I +N ++ G C  G I  A  LL EM  +   PD +T+NT+++  
Sbjct: 448 EKFKKSIKEGMLPDIIMFNALIDGHCVNGNIDRAFQLLKEMDNAKVVPDEVTFNTLMQGY 507

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K ++A     +   +G  P  I+Y  LI    K+  +  A+EV D+M   G  P +
Sbjct: 508 CRERKVEEAKKLLDEMKERGIKPDHISYNTLISGYSKRGDMKDALEVFDEMLSLGFDPTL 567

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           +TYN+L+    K G+ D A  ++  + S+G+ P+  TY  ++ ++ +
Sbjct: 568 LTYNALIQGYSKIGEADHAEELLREMQSKGITPDDSTYLYVIEAMKT 614



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/132 (34%), Positives = 63/132 (47%), Gaps = 2/132 (1%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLI 163
           L   D   V  DE T N ++Q +C   K+ +A KL+D M  R   PD H   N LI G  
Sbjct: 485 LKEMDNAKVVPDEVTFNTLMQGYCRERKVEEAKKLLDEMKERGIKPD-HISYNTLISGYS 543

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           +   ++ A +V   M+  G  P  +TYN ++ G  K G+   A  LL EM   G  PD  
Sbjct: 544 KRGDMKDALEVFDEMLSLGFDPTLLTYNALIQGYSKIGEADHAEELLREMQSKGITPDDS 603

Query: 224 TYNTILRTMFDN 235
           TY  ++  M  N
Sbjct: 604 TYLYVIEAMKTN 615


>gi|30840221|emb|CAD61285.1| fertility restorer [Raphanus sativus]
 gi|32452380|emb|CAD80165.1| restorer of fertility pentatricopeptide repeat [Raphanus sativus]
 gi|32527602|gb|AAP86198.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
 gi|90903522|gb|ABE02309.1| Rf [Raphanus sativus]
 gi|90903524|gb|ABE02310.1| Rf [Raphanus sativus]
 gi|157931524|gb|ABW04886.1| PPR [Raphanus sativus]
          Length = 687

 Score =  219 bits (559), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 137/457 (29%), Positives = 226/457 (49%), Gaps = 12/457 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L   C   ++++A      M      P+      L+ GL R  RI +A  +L
Sbjct: 148 DVVTFTTLLHGLCVEDRVSEALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALL 207

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFD 234
             M+  G  P  ITY  +V G+CK+G   SA+ LL +M  VS   P+V+ Y+ I+ ++  
Sbjct: 208 DRMMEDGLQPTQITYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCK 267

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G+   A   + +   KG  P L TY  +I   C     + A ++L +M     SPD+VT
Sbjct: 268 DGRHSDAQNLFTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVT 327

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N   K+GK+ +A  + + +L RG+ PN+ITY++++     +   DA + +  +M 
Sbjct: 328 YNALINAFVKEGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMA 387

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               SP + T+N LI+G C    +D  +   ++M       D  TYNT++      G LN
Sbjct: 388 TKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLN 447

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-----------NGI 463
            AL LL  +  S   P ++T +TL+DGL   G ++ A+ ++  M +           NG+
Sbjct: 448 AALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGV 507

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD  T+  LI G     +  EA +L +E+  RG       Y  +I GLCK  ++D A Q
Sbjct: 508 EPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQ 567

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           + + M S  + P+   F+T++      G  ++  +L+
Sbjct: 568 MFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 604



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/457 (29%), Positives = 221/457 (48%), Gaps = 12/457 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   I+   C +G    A  L+  M   + I P+      +I  L +  R   A  +   
Sbjct: 221 TYGTIVDGMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTE 280

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD  TYN M+ G C  G+   A  LL EM      PDV+TYN ++      GK
Sbjct: 281 MQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGK 340

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A   + + L +G  P  ITY+ +I+  CKQ  +  A  +   MA +GCSP+++T+N+
Sbjct: 341 FFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNT 400

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C   + DD + +++ +   G+  ++ TYNTL+H     G  +A   +L  M  + 
Sbjct: 401 LIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSG 460

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-----------NCQPDIVTYNTVLGA 406
             P + T + L++GLC  G +  A+  F  M                +PD+ TYN ++  
Sbjct: 461 LCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISG 520

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           L  EG   EA +L   +      P  ITY+++IDGL K+  +++A  ++  M     SP+
Sbjct: 521 LINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPN 580

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T  TLI G+C+A +V++ ++L  E+G+RG       Y  +I G  K   ++ A+ + +
Sbjct: 581 VVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQ 640

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            MISS   PD      ++  +      + A  + +KL
Sbjct: 641 EMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 226/453 (49%), Gaps = 13/453 (2%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDF-HFCINLIRGLIRIDRIEKASKVLQIMVM 180
           K+   F     L DA  L   M R   +P    FC  L+  ++R++R +    + Q M  
Sbjct: 49  KLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFC-KLMGVVVRMERPDLVISLYQKMER 107

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
                D  ++N+++   C   ++  A++   +++  G  PDV+T+ T+L  +    +  +
Sbjct: 108 KQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSE 167

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+ F+       C P ++T+T L+  +C++  I  A+ +LD M  +G  P  +TY ++V+
Sbjct: 168 ALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 301 FSCKQGKYDDAVLVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
             CK+G   D V  +N  L R ME      PN + Y+ ++ SL   G       +   M 
Sbjct: 228 GMCKKG---DTVSALN--LLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQ 282

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E    P +FTYN +I G C  G    A     +M+ +   PD+VTYN ++ A  KEG   
Sbjct: 283 EKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFF 342

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA +L   +      P  ITY+++IDG  K+  ++ A  ++  M   G SP+ IT  TLI
Sbjct: 343 EAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLI 402

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C A ++++ ++LL E+ + G     + Y  +IHG      ++ A+ +L+ MISS   
Sbjct: 403 DGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLC 462

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           PD     T++  + D+G  ++A ++++ + + K
Sbjct: 463 PDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSK 495



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 209/410 (50%), Gaps = 1/410 (0%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           + L  G   I  +E A  +   M+ S  +P  + +  ++G + +  +    I+L  +M  
Sbjct: 48  LKLQSGFHEIKGLEDAIDLFSDMLRSRPLPSVVDFCKLMGVVVRMERPDLVISLYQKMER 107

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
                D+ ++N +++      K   A+  +    + G  P ++T+T L+  +C +  ++ 
Sbjct: 108 KQIRCDIYSFNILIKCFCSCSKLPFALSTFGKITKLGLHPDVVTFTTLLHGLCVEDRVSE 167

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A++    M    C P++VT+ +L+N  C++G+  +AV +++ ++  G++P  ITY T++ 
Sbjct: 168 ALDFFHQMFETTCRPNVVTFTTLMNGLCREGRIVEAVALLDRMMEDGLQPTQITYGTIVD 227

Query: 336 SLGSRGCWDAVDKILDIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            +  +G   +   +L  M E SH  P V  Y+ +I+ LCK G    A N F +M  K   
Sbjct: 228 GMCKKGDTVSALNLLRKMEEVSHIIPNVVIYSAIIDSLCKDGRHSDAQNLFTEMQEKGIF 287

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD+ TYN+++   C  G  ++A QLL  +     SP ++TYN LI+   K+G   +A  L
Sbjct: 288 PDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVKEGKFFEAEEL 347

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y +M+  GI P+ IT+ ++I GFC+ ++++ A  +   +  +G       +  +I G C 
Sbjct: 348 YDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCG 407

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +K++D  +++L  M  +    D T ++T++      G    A  L Q++I
Sbjct: 408 AKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/400 (28%), Positives = 200/400 (50%), Gaps = 18/400 (4%)

Query: 112 FVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           F E  EK       T N ++  FCS G+ +DA +L+  M  R   PD      LI   ++
Sbjct: 278 FTEMQEKGIFPDLFTYNSMIVGFCSSGRWSDAEQLLQEMLERKISPDVVTYNALINAFVK 337

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             +  +A ++   M+  G +P+TITY+ M+ G CK+ ++ +A  +   M+  GC P++IT
Sbjct: 338 EGKFFEAEELYDEMLPRGIIPNTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLIT 397

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           +NT++       +    +    +    G      TY  LI        +  A+++L +M 
Sbjct: 398 FNTLIDGYCGAKRIDDGMELLHEMTETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMI 457

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-----------GMEPNSITYNTL 333
             G  PDIVT ++L++  C  GK  DA+ +   +              G+EP+  TYN L
Sbjct: 458 SSGLCPDIVTCDTLLDGLCDNGKLKDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNIL 517

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L + G +   +++ + M      P   TY+ +I+GLCK   +D A   F+ M SK+ 
Sbjct: 518 ISGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSF 577

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P++VT+ T++   CK G +++ L+L   +         ITY TLI G  K G +  A+ 
Sbjct: 578 SPNVVTFTTLINGYCKAGRVDDGLELFCEMGRRGIVANAITYITLICGFRKVGNINGALD 637

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           ++ +M+ +G+ PD IT R ++ G    ++++ AV +L+++
Sbjct: 638 IFQEMISSGVYPDTITIRNMLTGLWSKEELKRAVAMLEKL 677



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 94/319 (29%), Positives = 155/319 (48%), Gaps = 11/319 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC + +L  A  +  +MA +   P+      LI G     RI+   ++L  M
Sbjct: 362 TYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPNLITFNTLIDGYCGAKRIDDGMELLHEM 421

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G V DT TYN ++ G    G + +A+ LL EM  SG  PD++T +T+L  + DNGK 
Sbjct: 422 TETGLVADTTTYNTLIHGFYLVGDLNAALDLLQEMISSGLCPDIVTCDTLLDGLCDNGKL 481

Query: 239 KQAIGFWKDQLRK-----------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           K A+  +K   +            G  P + TY ILI  +  +     A E+ ++M   G
Sbjct: 482 KDALEMFKVMQKSKKDLDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRG 541

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD +TY+S+++  CKQ + D+A  + +++ S+   PN +T+ TL++     G  D   
Sbjct: 542 IVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGL 601

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M          TY  LI G  K G ++ A++ F +M+S    PD +T   +L  L
Sbjct: 602 ELFCEMGRRGIVANAITYITLICGFRKVGNINGALDIFQEMISSGVYPDTITIRNMLTGL 661

Query: 408 CKEGMLNEALQLLHLLNGS 426
             +  L  A+ +L  L  S
Sbjct: 662 WSKEELKRAVAMLEKLQMS 680


>gi|242069905|ref|XP_002450229.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
 gi|241936072|gb|EES09217.1| hypothetical protein SORBIDRAFT_05g002220 [Sorghum bicolor]
          Length = 797

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 133/486 (27%), Positives = 252/486 (51%), Gaps = 7/486 (1%)

Query: 84  VLAVNKKLRGLTITKKSHDP-----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           V++ N  L+G    K++ +       +  S G     +  +   ++  F + G++  A  
Sbjct: 165 VVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVINGFFTEGQVDKAYN 224

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L   M  R   P+      +I GL +   +++A  V Q M+  G  PD  TYN ++ G  
Sbjct: 225 LFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKPDNDTYNCLIHGYL 284

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
             G+ +  + +L+EMS  G +PD  TY ++L  + +NG+ ++A   +   +RKG  P + 
Sbjct: 285 SIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLFDSMIRKGIKPNVA 344

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
            Y ILI     +  ++   ++L+ M   G SPD   +N +     K+   D+A+ + N +
Sbjct: 345 IYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKM 404

Query: 319 LSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
             +G+ P+ + Y  L+ +L   G   DAV K   +MNE   +P +F +N L+ GLC    
Sbjct: 405 KQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGV-APNIFVFNSLVYGLCTVDK 463

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            ++A   + +M+++  +PD+V +NT+L  LC +G + +A +L+ L+      P +I+Y T
Sbjct: 464 WEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTT 523

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI G    G +++A      M+  G+ PD+ T+ TL+ G+CRA ++++A  + +E+ + G
Sbjct: 524 LIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNG 583

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y  ++HGL  +++   A ++   MI+S  + +  +++ I+  ++ +   +EA+
Sbjct: 584 ITPGVVTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAF 643

Query: 558 KLWQKL 563
           KL+Q L
Sbjct: 644 KLFQSL 649



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 114/492 (23%), Positives = 216/492 (43%), Gaps = 115/492 (23%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIA------------------------------------ 208
           PD  TY++++G  C+ G++    A                                    
Sbjct: 92  PDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMDI 151

Query: 209 LLDEMSVSGCEPDVITYNTILR-------------------------------------- 230
           L+  M   GC PDV++YNT+L+                                      
Sbjct: 152 LVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVIN 211

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA-------------- 276
             F  G+  +A   + + + +G  P ++TYT +I+ +CK   + RA              
Sbjct: 212 GFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVKP 271

Query: 277 ---------------------IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
                                + +L++M+  G  PD  TY SL+N+ C  G+  +A  + 
Sbjct: 272 DNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFLF 331

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           ++++ +G++PN   Y  L+H   ++G    +  +L++M E   SP    +NI+     K 
Sbjct: 332 DSMIRKGIKPNVAIYGILIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKK 391

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
            ++D A++ FN+M  +   PD+V Y  ++ ALCK G +++A+   + +     +P +  +
Sbjct: 392 AMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVF 451

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA---VDLLKE 492
           N+L+ GL      EKA   Y +M+  GI PD +   T++   C   QV +A   +DL++ 
Sbjct: 452 NSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMER 511

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +G R   +   +Y  +I G C   ++D A + L++M+S   KPD+  ++T++      G 
Sbjct: 512 VGTRPGVI---SYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGR 568

Query: 553 TEEAYKLWQKLI 564
            ++AY ++++++
Sbjct: 569 IDDAYGVFREML 580



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 98/392 (25%), Positives = 187/392 (47%), Gaps = 4/392 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  + ++G L++   L+++M      PD H    +     +   I++A  +   M   G
Sbjct: 349 LIHGYATKGALSEMHDLLNLMVENGLSPDHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQG 408

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD + Y  ++  LCK G++  A+   ++M   G  P++  +N+++  +    K+++A 
Sbjct: 409 LSPDVVNYGALIDALCKLGRVDDAVLKFNQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAK 468

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            F+ + L +G  P ++ +  ++  +C +  + +A  ++D M   G  P +++Y +L+   
Sbjct: 469 EFYFEMLNQGIRPDVVFFNTILCNLCTKGQVMKAQRLIDLMERVGTRPGVISYTTLIGGH 528

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G+ D+A   ++ +LS G++P+  TYNTLLH     G  D    +   M     +P V
Sbjct: 529 CLVGRIDEAAKSLDVMLSVGLKPDEWTYNTLLHGYCRAGRIDDAYGVFREMLRNGITPGV 588

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ +++GL        A   +  M++   Q +I  YN +L  L K   ++EA +L   
Sbjct: 589 VTYSTILHGLFTTRRFSEAKELYLNMITSGKQWNIWIYNIILNGLSKNNCVDEAFKLFQS 648

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L        + T+N +I  L K G  E AM L+  +   G+ PD  T+  +         
Sbjct: 649 LCSKDFQLEITTFNIMIGALFKSGRNEDAMHLFATISSYGLVPDVFTYCLIAENLIEEGY 708

Query: 483 VEEAVDLLKEIGKRG----NKMRNSAYRLVIH 510
           +EE  DL   + K G    ++M N+  R ++H
Sbjct: 709 LEEFDDLFSAMEKSGTTPNSRMLNALVRRLLH 740



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 190/411 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N I   +  +  + +A  + + M ++   PD      LI  L ++ R++ A    
Sbjct: 377 DHHIFNIIFTAYAKKAMIDEAMHIFNKMKQQGLSPDVVNYGALIDALCKLGRVDDAVLKF 436

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+   +N +V GLC   +   A     EM   G  PDV+ +NTIL  +   
Sbjct: 437 NQMMNEGVAPNIFVFNSLVYGLCTVDKWEKAKEFYFEMLNQGIRPDVVFFNTILCNLCTK 496

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A        R G  P +I+YT LI   C    I  A + LD M   G  PD  TY
Sbjct: 497 GQVMKAQRLIDLMERVGTRPGVISYTTLIGGHCLVGRIDEAAKSLDVMLSVGLKPDEWTY 556

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  C+ G+ DDA  V   +L  G+ P  +TY+T+LH L +   +    ++   M  
Sbjct: 557 NTLLHGYCRAGRIDDAYGVFREMLRNGITPGVVTYSTILHGLFTTRRFSEAKELYLNMIT 616

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +     ++ YNI++NGL K   VD A   F  + SK+ Q +I T+N ++GAL K G   +
Sbjct: 617 SGKQWNIWIYNIILNGLSKNNCVDEAFKLFQSLCSKDFQLEITTFNIMIGALFKSGRNED 676

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ L   ++     P + TY  + + L ++G +E+   L+  M ++G +P+      L+ 
Sbjct: 677 AMHLFATISSYGLVPDVFTYCLIAENLIEEGYLEEFDDLFSAMEKSGTTPNSRMLNALVR 736

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
                  +  A   L ++ ++   +  S   ++I  L + +    A  + E
Sbjct: 737 RLLHRGDITRAGAYLCKLDEKNFSLEASTTAMLISLLSRDEYHHHATSLPE 787



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 144/305 (47%), Gaps = 49/305 (16%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSL----GSRGCWDAVDKILDIMNEASH------ 358
           DDA+ + + LL+     + I +N LL ++    G R      + ++ + N          
Sbjct: 31  DDALKLFDGLLTHARPASVIAFNHLLTAVSRVSGRRSSTTESELVVSLFNRMIRECTIKV 90

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSF---------------NQMVSK------------ 391
           +P   TY+ILI   C+ G ++    +F               NQ++              
Sbjct: 91  TPDPCTYSILIGCFCRMGRLEHGFATFGLILKSGWRVNNIVINQLLKGLCDAKRLCEAMD 150

Query: 392 ---------NCQPDIVTYNTVLGALCKEGMLNEALQLLHLL---NGSSCSPCLITYNTLI 439
                     C PD+V+YNT+L   C E    EAL+LLH++    G SC P +++Y  +I
Sbjct: 151 ILVKRMPELGCTPDVVSYNTLLKGFCNEKRAEEALELLHMMADSQGRSCPPNVVSYAIVI 210

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +G   +G ++KA  L+ +MM+ GI P+ +T+ T+I G C+A  V+ A  + +++  +G K
Sbjct: 211 NGFFTEGQVDKAYNLFLEMMDRGIQPNVVTYTTVIDGLCKAQVVDRAEGVFQQMIDKGVK 270

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             N  Y  +IHG     K    +++LE M +   KPD   + +++  + ++G   EA  L
Sbjct: 271 PDNDTYNCLIHGYLSIGKWKEVVRMLEEMSAHGLKPDCYTYGSLLNYLCNNGRCREARFL 330

Query: 560 WQKLI 564
           +  +I
Sbjct: 331 FDSMI 335


>gi|357498921|ref|XP_003619749.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494764|gb|AES75967.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 680

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 236/444 (53%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  G +  A  ++  + +    PD       I+G     +I +A      +V 
Sbjct: 109 NILINCFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVA 168

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D ++Y  ++ GLCK G+ R+A+ LL  +     + DV+ Y+TI+ +M  +     
Sbjct: 169 LGFHLDQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVND 228

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + + +     ++TY+ LI   C    +  AI + + M  E  +PD+ T+N LV+
Sbjct: 229 AFDLYSEMVSRRISSNIVTYSALISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVD 288

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK+G+  +A   +  ++ +G++P+ +TYN+L+         +    IL+ M+    + 
Sbjct: 289 AFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTA 348

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           TV +YNI+ING CK  +VD+A+  F +M  K   P+++TYN+++  LCK G ++ AL+L+
Sbjct: 349 TVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELI 408

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            L++     P +ITY++++D L K   ++KA+ L  ++ + GI P+  T+  LI G C+ 
Sbjct: 409 DLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKG 468

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++E+A ++ +++  +G  +  + Y ++I G C     D A+ +L  M  +   PD   +
Sbjct: 469 GRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITY 528

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
             I+  + D    ++A KL +++I
Sbjct: 529 EIIICSLFDKDENDKAEKLLREMI 552



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 127/506 (25%), Positives = 235/506 (46%), Gaps = 41/506 (8%)

Query: 94  LTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP-DF 152
           +++ KK H    P +   +  +   T+      F +   + DA  L + + R+N  P D 
Sbjct: 16  VSVPKKFHPFQFPENTHFYFIHSFSTST----TFHNNNDVVDAVSLFNCLLRQNPTPPDM 71

Query: 153 HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
            F   ++  L++         + Q M   G  P+ + +N+++   C+ G I  A ++L +
Sbjct: 72  EFG-QILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILINCFCQLGLIPFAFSVLAK 130

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           +   G EPD IT NT ++     G+  QA+ F    +  G     ++Y  LI  +CK   
Sbjct: 131 ILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVSYGTLINGLCKVGE 190

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
              A+E+L  +  +    D+V Y+++++  CK    +DA  + + ++SR +  N +TY+ 
Sbjct: 191 TRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSA 250

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L+      G       + + M   + +P V+T+NIL++  CK G V  A N    M+ + 
Sbjct: 251 LISGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQG 310

Query: 393 CQPDIVTYNT-----------------------------------VLGALCKEGMLNEAL 417
            +PDIVTYN+                                   V+   CK  M+++A+
Sbjct: 311 IKPDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAM 370

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L   ++     P +ITYN+LIDGL K G +  A+ L   M + G  PD IT+ +++   
Sbjct: 371 KLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDAL 430

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+   V++A+ LL ++  +G +     Y ++I GLCK  +++ A  + E ++   Y    
Sbjct: 431 CKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTV 490

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
             ++ +++     G+ +EA  L  K+
Sbjct: 491 NTYTVMIQGFCSHGLFDEALSLLSKM 516



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 108/423 (25%), Positives = 200/423 (47%), Gaps = 43/423 (10%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDA----SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           E D  T N  ++ FC +G++  A     KL+ +    +Q+        LI GL ++    
Sbjct: 137 EPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHLDQVS----YGTLINGLCKVGETR 192

Query: 170 KA--------SKVLQI-MVMSGGVPDT--------------------------ITYNMMV 194
            A         K++Q+ +VM   + D+                          +TY+ ++
Sbjct: 193 AALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLYSEMVSRRISSNIVTYSALI 252

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            G C  G+++ AI L ++M+     PDV T+N ++      G+ K+A       +++G  
Sbjct: 253 SGFCIVGKLKDAIGLFNKMTSENINPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIK 312

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P ++TY  L++  C    +  A  +L+ M+  G +  + +YN ++N  CK    D A+ +
Sbjct: 313 PDIVTYNSLMDGYCLVNEVNMAKSILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKL 372

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
              +  + + PN ITYN+L+  L   G      +++D+M++    P + TY+ +++ LCK
Sbjct: 373 FKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDLMHDRGQQPDIITYSSILDALCK 432

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
             LVD+AI    ++  +  +P++ TY  ++  LCK G L +A  +   L     +  + T
Sbjct: 433 NHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNT 492

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y  +I G    G  ++A+ L  +M +N   PD IT+  +I      D+ ++A  LL+E+ 
Sbjct: 493 YTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMI 552

Query: 495 KRG 497
            RG
Sbjct: 553 TRG 555



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 97/400 (24%), Positives = 180/400 (45%), Gaps = 20/400 (5%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N ++  FC  G++ +A   + +M ++   PD     +L+ G   ++ +  A 
Sbjct: 276 INPDVYTFNILVDAFCKEGRVKEAKNGLAMMMKQGIKPDIVTYNSLMDGYCLVNEVNMAK 335

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  M   G      +YN+++ G CK   +  A+ L  EM      P+VITYN+++  +
Sbjct: 336 SILNTMSHRGVTATVRSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGL 395

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G+   A+        +G  P +ITY+ +++ +CK   + +AI +L  +  +G  P++
Sbjct: 396 CKSGRISYALELIDLMHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNM 455

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY  L++  CK G+ +DA  +  +LL +G      TY  ++    S G +D    +L  
Sbjct: 456 YTYTILIDGLCKGGRLEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSK 515

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT---VLGALCK 409
           M + S  P   TY I+I  L      D+A     +M+++      + Y +      A   
Sbjct: 516 MKDNSCIPDAITYEIIICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPA 575

Query: 410 EGMLNEALQLLH----------LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG--Q 457
             + N++LQ             LL    C  C++T + + D    K     ++++Y    
Sbjct: 576 HFLNNDSLQCTSSQESGNWAKLLLERIYCD-CVLTKSNMRD----KDVECPSVIIYSTCD 630

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
             + G   D  T+  +I GFC     +E++ LL ++   G
Sbjct: 631 WSKQGYILDVNTYTVMIQGFCSHGLFDESLALLSKMEVNG 670



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 82/329 (24%), Positives = 141/329 (42%), Gaps = 45/329 (13%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N ++  FC    +  A KL   M  +   P+     +LI GL +  RI  A +++ +
Sbjct: 351 RSYNIVINGFCKIKMVDQAMKLFKEMHHKQIFPNVITYNSLIDGLCKSGRISYALELIDL 410

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD ITY+ ++  LCK   +  AIALL ++   G  P++ TY  ++  +   G+
Sbjct: 411 MHDRGQQPDIITYSSILDALCKNHLVDKAIALLIKLKDQGIRPNMYTYTILIDGLCKGGR 470

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            + A   ++D L KG    + TYT++I+  C       A+ +L  M    C PD +TY  
Sbjct: 471 LEDARNIFEDLLVKGYNLTVNTYTVMIQGFCSHGLFDEALSLLSKMKDNSCIPDAITYEI 530

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGM----------------EPNSITYNTLLHSLGSR- 340
           ++     + + D A  ++  +++RG+                 P     N  L    S+ 
Sbjct: 531 IICSLFDKDENDKAEKLLREMITRGLLYSFLEYGSWSLSFMAAPAHFLNNDSLQCTSSQE 590

Query: 341 -GCW----------DAVDKILDIMNEASHSPTVF-----------------TYNILINGL 372
            G W          D V    ++ ++    P+V                  TY ++I G 
Sbjct: 591 SGNWAKLLLERIYCDCVLTKSNMRDKDVECPSVIIYSTCDWSKQGYILDVNTYTVMIQGF 650

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
           C +GL D ++   ++M    C PD VTY+
Sbjct: 651 CSHGLFDESLALLSKMEVNGCIPDAVTYD 679



 Score = 86.7 bits (213), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/188 (23%), Positives = 94/188 (50%)

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A++ FN ++ +N  P  + +  +LG+L K    +  L L   +      P  + +N LI+
Sbjct: 54  AVSLFNCLLRQNPTPPDMEFGQILGSLVKSKHYHTVLSLFQKMEYRGIKPNFVNFNILIN 113

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
              + G +  A  +  ++++ G  PD IT  T I GFC   Q+ +A++   ++   G  +
Sbjct: 114 CFCQLGLIPFAFSVLAKILKMGYEPDTITLNTFIKGFCLKGQIHQALNFHDKLVALGFHL 173

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              +Y  +I+GLCK  +   A+++L  +     + D  ++STI+  +  D    +A+ L+
Sbjct: 174 DQVSYGTLINGLCKVGETRAALELLRRVDGKLVQLDVVMYSTIIDSMCKDKNVNDAFDLY 233

Query: 561 QKLIEWKV 568
            +++  ++
Sbjct: 234 SEMVSRRI 241


>gi|115474441|ref|NP_001060817.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|42408384|dbj|BAD09535.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113622786|dbj|BAF22731.1| Os08g0110200 [Oryza sativa Japonica Group]
 gi|125601950|gb|EAZ41275.1| hypothetical protein OsJ_25782 [Oryza sativa Japonica Group]
          Length = 798

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 145/535 (27%), Positives = 255/535 (47%), Gaps = 56/535 (10%)

Query: 78  WSSESHVLAVNKKLRGLTITKKSHD---------PSLPSSDGPFVENDEKTNNKILQNFC 128
           W++++  +  +  L+GL   K++ D         P+L  +   F      + N +L+  C
Sbjct: 127 WTAQA--ITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNAF------SYNILLKGLC 178

Query: 129 SRGKLTDASKLIDIM----ARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV 184
              +   A  L+  M     R    PD      +I GL+R  +++KA  +   M+  G  
Sbjct: 179 DENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYCLFDEMLDQGMS 238

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+ ITYN ++ G C  G+ + AI +  +M   G EPDV+TYNT++  +  NG+  +A   
Sbjct: 239 PNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLCKNGRSMEARKV 298

Query: 245 WKDQLRKGCPP----------------YLIT-------------------YTILIEQVCK 269
           +   ++KG  P                YL+                    + ILI    K
Sbjct: 299 FDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHYIFNILIGAYAK 358

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A+     M  +G  P+IVTY ++++  C+ GK DDA+   + L+S G+ PN + 
Sbjct: 359 HGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRLISEGLTPNGVV 418

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           + TL+H L +   WD  +++   M      P    +N L+N LCK G+V RA N F+ MV
Sbjct: 419 FRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMVTRAKNIFDLMV 478

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
             + Q D++TY T++   C +G ++EA +LL  +      P  +TYNT+I+G  K G +E
Sbjct: 479 RVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTIINGYCKNGRIE 538

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A  L+ QM   G++P  + + T++ G  +  ++  A +L   + K G K+    Y +++
Sbjct: 539 DACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGIKLPIGTYNIIL 598

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            GLC++   D A+++   +    +   +  F+ ++  +   G  +EA  L+  L+
Sbjct: 599 QGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKDLFASLL 653



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 208/406 (51%), Gaps = 5/406 (1%)

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL-LDEMSVSGCEPDV 222
           R   ++ A   L  ++ +G     IT++ ++ GLC   +   A+ + L  M   GC P+ 
Sbjct: 108 RAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRRMPALGCTPNA 167

Query: 223 ITYNTILRTMFDNGKFKQAIGFWK----DQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
            +YN +L+ + D  + +QA+        D  R GCPP +++YT +I  + ++  + +A  
Sbjct: 168 FSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLLREGQLDKAYC 227

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           + D+M  +G SP+ +TYN L++  C  GK  +A+ +   +   G+EP+ +TYNTL+  L 
Sbjct: 228 LFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVVTYNTLMVYLC 287

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
             G      K+ D M +  H P    Y  L++G    G + +     + MV    QPD  
Sbjct: 288 KNGRSMEARKVFDSMVKKGHKPDSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPDHY 347

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
            +N ++GA  K GM++EA+     +      P ++TY T++D L + G ++ AM  + ++
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           +  G++P+ +  RTLI G C  D+ ++A +L  E+  RG       +  +++ LCK   V
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             A  + +LM+    + D   ++T++     DG  +EA KL + ++
Sbjct: 468 TRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMV 513



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 116/477 (24%), Positives = 204/477 (42%), Gaps = 54/477 (11%)

Query: 95  TITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHF 154
           ++ KK H P            D      +L  + + G L    +L+D+M R    PD H+
Sbjct: 301 SMVKKGHKP------------DSSIYGTLLHGYATEGYLVQMHQLLDVMVRNGTQPD-HY 347

Query: 155 CIN-LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD-- 211
             N LI    +   +++A      M   G  P+ +TY  ++  LC+ G++  A++  D  
Sbjct: 348 IFNILIGAYAKHGMVDEAMLAFSKMRQQGLHPNIVTYGTVMDALCRVGKVDDAMSQFDRL 407

Query: 212 ---------------------------------EMSVSGCEPDVITYNTILRTMFDNGKF 238
                                            EM   G  P+ I +NT+L  +   G  
Sbjct: 408 ISEGLTPNGVVFRTLIHGLCACDKWDKAEELAVEMIGRGICPNTIFFNTLLNHLCKEGMV 467

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +   +R      +ITYT LI+  C    +  A ++L+ M ++G  P+ VTYN++
Sbjct: 468 TRAKNIFDLMVRVDVQCDVITYTTLIDGYCLDGKVDEATKLLEGMVLDGVKPNEVTYNTI 527

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G+ +DA  +   + S+G+ P  + Y+T+LH L       A  ++   M +   
Sbjct: 528 INGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAKELYLWMIKCGI 587

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              + TYNI++ GLC+    D A+  F+ +   +      T+N ++ AL K G  +EA  
Sbjct: 588 KLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDALLKGGRHDEAKD 647

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   L      P ++TY  ++  L ++G +E+   L+  + +NG + D      L+    
Sbjct: 648 LFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADSRMLNALVGKLP 707

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           +  +V +A   L +I +    +  S    ++  L  S K D  I      I  +Y+P
Sbjct: 708 QKGEVRKAGVYLSKIDENNFSLEASTAESLVF-LVSSGKYDQHINS----IPEKYRP 759



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/207 (25%), Positives = 103/207 (49%), Gaps = 5/207 (2%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL-LHL 422
           TY+I+I    + G +D A  +  +++        +T++ +L  LC +   ++A+ + L  
Sbjct: 98  TYSIVIGCCSRAGHLDLAFAALGRVIRTGWTAQAITFSPLLKGLCHDKRTSDAMDIALRR 157

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN----GISPDDITHRTLIWGFC 478
           +    C+P   +YN L+ GL  +   ++A+ L   MM +    G  PD +++ T+I G  
Sbjct: 158 MPALGCTPNAFSYNILLKGLCDENRSQQALHLLHTMMADDTRGGCPPDVVSYTTVINGLL 217

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  Q+++A  L  E+  +G       Y  ++HG C S K   AI +   M     +PD  
Sbjct: 218 REGQLDKAYCLFDEMLDQGMSPNCITYNCLLHGYCSSGKPKEAIGIFRKMCRDGVEPDVV 277

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++T++  +  +G + EA K++  +++
Sbjct: 278 TYNTLMVYLCKNGRSMEARKVFDSMVK 304



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 61/276 (22%), Positives = 123/276 (44%), Gaps = 5/276 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +E T N I+  +C  G++ DA  L   MA +   P       ++ GL +  RI  A 
Sbjct: 517 VKPNEVTYNTIINGYCKNGRIEDACSLFRQMASKGVNPGIVIYSTILHGLFQTRRIAAAK 576

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M+  G      TYN+++ GLC+      A+ +   + +        T+N ++  +
Sbjct: 577 ELYLWMIKCGIKLPIGTYNIILQGLCQNNCTDDALRMFHNLCLIDFHLQNRTFNIMIDAL 636

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  +A   +   L +G  P ++TY ++++ + +Q  +    ++   +   GC+ D 
Sbjct: 637 LKGGRHDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTADS 696

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDKILD 351
              N+LV    ++G+   A + ++ +        + T  +L+  L S G +D  ++ I +
Sbjct: 697 RMLNALVGKLPQKGEVRKAGVYLSKIDENNFSLEASTAESLVF-LVSSGKYDQHINSIPE 755

Query: 352 IMNEASHSPTVFTYNI---LINGLCKYGLVDRAINS 384
                + S  VF+      L +    YG+V R  +S
Sbjct: 756 KYRPTAKSRAVFSQKKNPGLFDAAGSYGVVTRLYSS 791


>gi|147857775|emb|CAN80799.1| hypothetical protein VITISV_019809 [Vitis vinifera]
          Length = 1099

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 238/460 (51%), Gaps = 3/460 (0%)

Query: 107 SSDGPF-VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIR 164
           ++DG F  +   +  N IL +  S+  L D  K + +    NQI P+ +    ++ G  +
Sbjct: 148 NADGEFKFKPTLRCYNTILMSL-SKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCK 206

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           I  + +A      +V +G  PDT TY  ++ G C+   + +A  +   M   GC+ + ++
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  ++  + + G+  +A+  + D     C P + TYT+LI  +        A+ + ++M 
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +GC P++ TY  L++  CK+ K D+A  +++ +  +G+ P+ +TYN L+      G  D
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
              +ILD+M   S  P   TYN LI GLCK   V +A+   N+M+ +   P ++TYN+++
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
              CK   L  A +LL L+N +   P   TY+  ID L K+G +E+A  L+  +   G+ 
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
            +++ +  LI G+C+  +++ A  LL+ +        +  Y ++I GLCK KK+  A  +
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +  M++   KP    ++ ++ ++  DG  + A K++  ++
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV 606



 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 224/447 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G + +A      + +    PD     +LI G  R   ++ A +V  IM
Sbjct: 196 TFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIM 255

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G   + ++Y  ++ GLC+ G+I  A+ L  +M+   C P V TY  ++  +  +G+ 
Sbjct: 256 PQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRK 315

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + +   KGC P + TYT+LI+ +CK+  +  A ++L +M+ +G  P +VTYN+L
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G  DDA  +++ + S    PN+ TYN L+  L  +        +L+ M E   
Sbjct: 376 IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP++ TYN LI+G CK   ++ A    + M      PD  TY+  +  LCKEG + EA  
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +         + Y  LIDG  K G ++ A  L  +M+ +   P+  T+  LI G C
Sbjct: 496 LFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLC 555

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +++EA  L+ ++   G K     Y ++I  + K    D A++V   M+S  Y+PD  
Sbjct: 556 KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++  +      GM EE   +  K+ E
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAKMNE 642



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 224/466 (48%), Gaps = 15/466 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           + +T N+++   C + K+  A  L++ M  R   P      +LI G  +++ +E A ++L
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M  +G VPD  TY++ +  LCK G++  A  L D +   G + + + Y  ++      
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A    +  L   C P   TY +LIE +CK+  +  A  ++  M   G  P +VTY
Sbjct: 523 GKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY 582

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+    K G +D A+ V N+++S G +P+  TY   LH+  S+G  + VD ++  MNE
Sbjct: 583 TILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE 642

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TY +LI+G  + GL  RA +    MV   C+P +   + ++  L  E  + E
Sbjct: 643 EGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
               + + + S+ +      +  I  + K    E A+ L+ +M+E+G + D   +  LI 
Sbjct: 703 TRSEIGIDSVSNVN------SVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIA 756

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GFC+ +++EEA  L+  + +RG       Y  ++   CK      A+++++ M+ +   P
Sbjct: 757 GFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLP 816

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL---------IEWKVFEKG 572
               +  +V  +  +G  E+A  ++  L         + WKV   G
Sbjct: 817 LLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 862



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 204/412 (49%), Gaps = 3/412 (0%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGV---PDTITYNMMVGGLCKRGQIRSAIALLDE 212
           I++I+    I+ +    +V + M   G     P    YN ++  L K   I     +  E
Sbjct: 125 ISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLE 184

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           +  +   P++ T+N ++      G   +A  +    ++ G  P   TYT LI   C+  G
Sbjct: 185 LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKG 244

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           +  A EV   M  +GC  + V+Y +L++  C+ G+ ++A+ +  ++      P   TY  
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L+++L   G       + + M E    P V TY +LI+GLCK   +D A    ++M  K 
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             P +VTYN ++   CKEGM+++A ++L L+  +SC P   TYN LI GL KK  + KAM
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  +M+E  +SP  IT+ +LI G C+ + +E A  LL  + + G       Y + I  L
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           CK  +V+ A  + + + +   K ++ +++ ++      G  + AY L ++++
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/442 (25%), Positives = 200/442 (45%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + +E +   ++   C  G++ +A KL   M   N  P       LI  L    R  +A  
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G  P+  TY +++ GLCK  ++  A  +L EMS  G  P V+TYN ++    
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G    A           C P   TY  LI  +CK+  + +A+ +L+ M     SP ++
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYNSL++  CK    + A  +++ +   G+ P+  TY+  + +L   G  +    + D +
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                      Y  LI+G CK G +D A +   +M++  C P+  TYN ++  LCKE  +
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA  L+  +      P ++TY  LI  + K G  + A+ ++  M+  G  PD  T+   
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           +  +     +EE  D++ ++ + G       Y ++I G  +      A   L+ M+ +  
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680

Query: 534 KPDDTVFSTIVKKVADDGMTEE 555
           KP   + S ++K ++ +   +E
Sbjct: 681 KPSLYIVSILIKNLSHENRMKE 702



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/383 (25%), Positives = 179/383 (46%), Gaps = 16/383 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +E     ++  +C  GK+  A  L++ M     +P+ +    LI GL +  ++++AS
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M+  G  P  +TY +++G + K G    A+ + + M   G +PDV TY   L   
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAY 624

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F  G  ++          +G  P L+TYT+LI+   +     RA + L  M   GC P +
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684

Query: 293 VTYNSLV-NFS----CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              + L+ N S     K+ + +  +  ++N+       NS+    +  +L     ++   
Sbjct: 685 YIVSILIKNLSHENRMKETRSEIGIDSVSNV-------NSVDIADVWKTLE----YEIAL 733

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+ + M E   +  V  Y  LI G C+   ++ A    + M  +   P    YN++L   
Sbjct: 734 KLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCC 793

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CK G+  EA++L+  +  +   P L +Y  L+ GL  +G  EKA  ++  ++  G + D+
Sbjct: 794 CKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDE 853

Query: 468 ITHRTLIWGFCRADQVEEAVDLL 490
           +  + LI G  + D V+E  +L+
Sbjct: 854 VAWKVLIDGLLKRDLVDECSELI 876



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 149/309 (48%), Gaps = 3/309 (0%)

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEG---CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           +I+  C    +   +EV   M  +G     P +  YN+++    K    D+   V   LL
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           +  + PN  T+N +++     G     +     + +A   P  FTY  LI G C+   VD
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A   F  M  K CQ + V+Y  ++  LC+ G +NEAL+L   +   +C P + TY  LI
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
             L+  G   +A+ L+ +M E G  P+  T+  LI G C+ ++++EA  +L E+ ++G  
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI 366

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +I G CK   +D A ++L+LM S+   P+   ++ ++  +       +A  L
Sbjct: 367 PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMAL 426

Query: 560 WQKLIEWKV 568
             K++E K+
Sbjct: 427 LNKMLERKL 435



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 93/409 (22%), Positives = 167/409 (40%), Gaps = 64/409 (15%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T +  +   C  G++ +A  L D +  +    +      LI G  ++ +I+ A  +L
Sbjct: 473 DQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLL 532

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+    +P++ TYN+++ GLCK  +++ A +L+ +M   G +P V+TY  ++  M  +
Sbjct: 533 ERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKD 592

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G F  A+  +   +  G  P + TYT  +     Q  +    +V+  M  EG  PD+VTY
Sbjct: 593 GAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPN----SITYNTLLH---------------- 335
             L++   + G    A   +  ++  G +P+    SI    L H                
Sbjct: 653 TVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSV 712

Query: 336 ----SLGSRGCWDAVD-----KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
               S+     W  ++     K+ + M E   +  V  Y  LI G C+   ++ A    +
Sbjct: 713 SNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVH 772

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN---------- 436
            M  +   P    YN++L   CK G+  EA++L+  +  +   P L +Y           
Sbjct: 773 HMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEG 832

Query: 437 -------------------------TLIDGLAKKGCMEKAMVLYGQMME 460
                                     LIDGL K+  +++   L   M E
Sbjct: 833 SNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEE 881



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 65/298 (21%), Positives = 117/298 (39%), Gaps = 31/298 (10%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G    A K+ + M      PD       +        +E+   V+  M   G +PD +TY
Sbjct: 593 GAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNEEGILPDLVTY 652

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ---------- 240
            +++ G  + G    A   L  M  +GC+P +   + +++ +    + K+          
Sbjct: 653 TVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKETRSEIGIDSV 712

Query: 241 -------------------AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
                              A+  ++  +  GC   +  Y  LI   C+Q  +  A  ++ 
Sbjct: 713 SNVNSVDIADVWKTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVH 772

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
            M   G SP    YNSL++  CK G Y +AV +++ ++  G+ P   +Y  L+  L   G
Sbjct: 773 HMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEG 832

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN--CQPDI 397
             +    +   +    ++     + +LI+GL K  LVD      + M  K+   Q DI
Sbjct: 833 SNEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSELIDIMEEKDATAQADI 890


>gi|41152688|dbj|BAD08213.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 762

 Score =  219 bits (558), Expect = 3e-54,   Method: Compositional matrix adjust.
 Identities = 134/477 (28%), Positives = 234/477 (49%), Gaps = 37/477 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   G    A      M  R   PD     ++I  L +   ++KA +VL  MV +G
Sbjct: 202 VINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNG 261

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +P+ +TYN ++ G C   Q + AI  L +M   G EPDV+TYN+++  +  NG+  +A 
Sbjct: 262 VMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEAR 321

Query: 243 GFWKDQLRKGCPPYLITY-----------------------------------TILIEQV 267
             +    ++G  P + TY                                    ILI   
Sbjct: 322 KIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAY 381

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
            KQ  +  A+ V   M   G +P++VTY +++   CK G  DDA+L    ++  G+ PN 
Sbjct: 382 AKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNI 441

Query: 328 ITYNTLLHSLGSRGCWDAVDK-ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           I Y +L+HSL     WD  ++ IL++++      T+F +N +I+  CK G V  +   F+
Sbjct: 442 IVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIF-FNSIIHSHCKEGRVIESEKLFD 500

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            MV    +P+++TY+T++   C  G ++EA +LL  +      P  +TYNTLI+G  +  
Sbjct: 501 LMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVS 560

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            M+ A+ L+ +M+ +G+SP+ IT+  ++ G     +   A +L   I K G ++  S Y 
Sbjct: 561 RMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYN 620

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +++HGLCK+   D A+++ + +  +  + +   F+ ++  +   G  +EA  L+  L
Sbjct: 621 IILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAAL 677



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 228/460 (49%), Gaps = 16/460 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARR----NQIPDFHFCINLIRGLIRIDRIEKASKV 174
           T   +L+  C+  + +DA   +DI+ RR    + +PD   C  L++GL   +R ++A ++
Sbjct: 124 TFTPLLKGLCADKRTSDA---MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALEL 180

Query: 175 LQIMV---MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           L +M      G  PD ++Y  ++ G  K G    A +   EM      PDV+TY++I+  
Sbjct: 181 LHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAA 240

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +       +A+      ++ G  P  +TY  ++   C       AI  L  M  +G  PD
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VTYNSL+++ CK G+  +A  + +++  RG+EP+  TY TLL    ++G    +  +LD
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           +M      P    +NILI    K   VD A+  F++M      P++VTY  V+G LCK G
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +++A+     +     +P +I Y +LI  L      +KA  L  +M++ GI  + I   
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480

Query: 472 TLIWGFCRADQV---EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           ++I   C+  +V   E+  DL+  IG + N +    Y  +I G C + K+D A ++L  M
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI---TYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            S   KPD   ++T++         ++A  L+++++   V
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 218/462 (47%), Gaps = 3/462 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE D  T N ++   C  G+ T+A K+ D M +R   PD      L++G      
Sbjct: 294 SDG--VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  PD   +N+++    K+ ++  A+ +  +M   G  P+V+TY  
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G    A+ +++  + +G  P +I YT LI  +C      +A E++ +M   G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              + + +NS+++  CK+G+  ++  + + ++  G++PN ITY+TL+      G  D   
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P   TYN LING C+   +D A+  F +MVS    P+I+TYN +L  L
Sbjct: 532 KLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
                   A +L   +  S     L TYN ++ GL K    ++A+ ++  +    +  + 
Sbjct: 592 FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 651

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  + +EA DL   +   G       Y L+   L +   ++    +   
Sbjct: 652 RTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSLMAENLIEQGLLEELDDLFLS 711

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           M  +    +  + ++IV+K+   G    A   +  +I+ K F
Sbjct: 712 MEENGCTANSRMLNSIVRKLLQRGDITRA-GTYLSMIDEKHF 752



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 114/422 (27%), Positives = 205/422 (48%), Gaps = 12/422 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + + + RR +    +    L R L  + R   A+ V +   M  +G     P   T
Sbjct: 33  DARHVFEELLRRGRGASIY---GLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHT 89

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C+ G++    A L  +   G   + IT+  +L+ +  + +   A+     ++
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE---GCSPDIVTYNSLVNFSCKQ 305
            +  C P + + TIL++ +C +     A+E+L  MA +   G +PD+V+Y +++N   K+
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G  D A    + +L R + P+ +TY++++ +L      D   ++L  M +    P   TY
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N +++G C       AI    +M S   +PD+VTYN+++  LCK G   EA ++   +  
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P + TY TL+ G A KG + +   L   M+ NGI PD      LI  + + ++V+E
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+ +  ++ + G       Y  VI  LCKS  VD A+   E MI     P+  V+++++ 
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 449

Query: 546 KV 547
            +
Sbjct: 450 SL 451



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 202/431 (46%), Gaps = 35/431 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T   +LQ + ++G L +   L+D+M R    PD H    LI    + +++++A 
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI---- 228
            V   M   G  P+ +TY  ++G LCK G +  A+   ++M   G  P++I Y ++    
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 229 ----------------------LRTMFDN---------GKFKQAIGFWKDQLRKGCPPYL 257
                                 L T+F N         G+  ++   +   +R G  P +
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           ITY+ LI+  C    +  A ++L  M   G  PD VTYN+L+N  C+  + DDA+ +   
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           ++S G+ PN ITYN +L  L       A  ++   + ++     + TYNI+++GLCK  L
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            D A+  F  +   + Q +  T+N ++GAL K G  +EA  L   L+ +   P + TY+ 
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFAALSANGLVPDVRTYSL 691

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           + + L ++G +E+   L+  M ENG + +     +++    +   +  A   L  I ++ 
Sbjct: 692 MAENLIEQGLLEELDDLFLSMEENGCTANSRMLNSIVRKLLQRGDITRAGTYLSMIDEKH 751

Query: 498 NKMRNSAYRLV 508
             +  S   L+
Sbjct: 752 FSLEASTASLL 762



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/144 (20%), Positives = 70/144 (48%), Gaps = 4/144 (2%)

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P + TY  LI    + G ++      G +++ G   + IT   L+ G C   +  +A+D
Sbjct: 84  TPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMD 143

Query: 489 L-LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR---YKPDDTVFSTIV 544
           + L+ + +        +  +++ GLC   +   A+++L +M   R     PD   ++T++
Sbjct: 144 IVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVI 203

Query: 545 KKVADDGMTEEAYKLWQKLIEWKV 568
                +G +++AY  + ++++ ++
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRI 227


>gi|225434273|ref|XP_002276453.1| PREDICTED: pentatricopeptide repeat-containing protein At5g65560
           [Vitis vinifera]
 gi|296084392|emb|CBI24780.3| unnamed protein product [Vitis vinifera]
          Length = 890

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 238/460 (51%), Gaps = 3/460 (0%)

Query: 107 SSDGPF-VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIR 164
           ++DG F  +   +  N IL +  S+  L D  K + +    NQI P+ +    ++ G  +
Sbjct: 148 NADGEFKFKPTLRCYNTILMSL-SKFLLIDEMKTVYLELLNNQISPNIYTFNAMVNGYCK 206

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           I  + +A      +V +G  PDT TY  ++ G C+   + +A  +   M   GC+ + ++
Sbjct: 207 IGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIMPQKGCQRNEVS 266

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  ++  + + G+  +A+  + D     C P + TYT+LI  +        A+ + ++M 
Sbjct: 267 YTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALNLFNEMK 326

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +GC P++ TY  L++  CK+ K D+A  +++ +  +G+ P+ +TYN L+      G  D
Sbjct: 327 EKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMID 386

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
              +ILD+M   S  P   TYN LI GLCK   V +A+   N+M+ +   P ++TYN+++
Sbjct: 387 DAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLI 446

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
              CK   L  A +LL L+N +   P   TY+  ID L K+G +E+A  L+  +   G+ 
Sbjct: 447 HGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVK 506

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
            +++ +  LI G+C+  +++ A  LL+ +        +  Y ++I GLCK KK+  A  +
Sbjct: 507 ANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSL 566

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +  M++   KP    ++ ++ ++  DG  + A K++  ++
Sbjct: 567 VAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMV 606



 Score =  218 bits (555), Expect = 6e-54,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 224/447 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G + +A      + +    PD     +LI G  R   ++ A +V  IM
Sbjct: 196 TFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVDNAYEVFLIM 255

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G   + ++Y  ++ GLC+ G+I  A+ L  +M+   C P V TY  ++  +  +G+ 
Sbjct: 256 PQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRK 315

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + +   KGC P + TYT+LI+ +CK+  +  A ++L +M+ +G  P +VTYN+L
Sbjct: 316 VEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNAL 375

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G  DDA  +++ + S    PN+ TYN L+  L  +        +L+ M E   
Sbjct: 376 IDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKL 435

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP++ TYN LI+G CK   ++ A    + M      PD  TY+  +  LCKEG + EA  
Sbjct: 436 SPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGT 495

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +         + Y  LIDG  K G ++ A  L  +M+ +   P+  T+  LI G C
Sbjct: 496 LFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLC 555

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +++EA  L+ ++   G K     Y ++I  + K    D A++V   M+S  Y+PD  
Sbjct: 556 KEKKMKEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVC 615

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++  +      GM EE   +  K+ E
Sbjct: 616 TYTAFLHAYFSQGMLEEVDDVIAKMNE 642



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 216/462 (46%), Gaps = 18/462 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           + +T N+++   C + K+  A  L++ M  R   P      +LI G  +++ +E A ++L
Sbjct: 403 NTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLL 462

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M  +G VPD  TY++ +  LCK G++  A  L D +   G + + + Y  ++      
Sbjct: 463 SLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKV 522

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A    +  L   C P   TY +LIE +CK+  +  A  ++  M   G  P +VTY
Sbjct: 523 GKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKMLTMGVKPTVVTY 582

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+    K G +D A+ V N+++S G +P+  TY   LH+  S+G  + VD ++  MNE
Sbjct: 583 TILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGMLEEVDDVIAKMNE 642

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TY +LI+G  + GL  RA +    MV   C+P +   + ++  L  E  + E
Sbjct: 643 EGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSILIKNLSHENRMKE 702

Query: 416 ------------------ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
                             AL+L   +    C+  +  Y  LI G  ++  +E+A  L   
Sbjct: 703 TRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHH 762

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M E G+SP +  + +L+   C+     EAV L+  + + G      +Y+L++ GL     
Sbjct: 763 MKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGS 822

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            + A  V   ++S  Y  D+  +  ++  +    + +E  +L
Sbjct: 823 NEKAKAVFHGLLSCGYNYDEVAWKVLIDGLLKRDLVDECSEL 864



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 139/521 (26%), Positives = 228/521 (43%), Gaps = 62/521 (11%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T   ++   C   K+ +A K++  M+ +  IP       LI G  +   I+ A +
Sbjct: 331 EPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYCKEGMIDDAFE 390

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L +M  +   P+T TYN ++ GLCK+ ++  A+ALL++M      P +ITYN+++    
Sbjct: 391 ILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLITYNSLIHGQC 450

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
                + A          G  P   TY++ I+ +CK+  +  A  + D +  +G   + V
Sbjct: 451 KVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSVKAKGVKANEV 510

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y +L++  CK GK D A  ++  +L+    PNS TYN L+  L           ++  M
Sbjct: 511 IYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEASSLVAKM 570

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 PTV TY ILI  + K G  D A+  FN MVS   QPD+ TY   L A   +GML
Sbjct: 571 LTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAYFSQGML 630

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG----------CM--------------- 448
            E   ++  +N     P L+TY  LIDG A+ G          CM               
Sbjct: 631 EEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSLYIVSIL 690

Query: 449 ----------------------------EKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
                                       E A+ L+ +M+E+G + D   +  LI GFC+ 
Sbjct: 691 IKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFEKMVEHGCTIDVSIYGALIAGFCQQ 750

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           +++EEA  L+  + +RG       Y  ++   CK      A+++++ M+ +   P    +
Sbjct: 751 ERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGVYAEAVRLVDAMVENGLLPLLESY 810

Query: 541 STIVKKVADDGMTEEAYKLWQKL---------IEWKVFEKG 572
             +V  +  +G  E+A  ++  L         + WKV   G
Sbjct: 811 KLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKVLIDG 851



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 212/476 (44%), Gaps = 15/476 (3%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + +E +   ++   C  G++ +A KL   M   N  P       LI  L    R  +A  
Sbjct: 261 QRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLIYALSGSGRKVEALN 320

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G  P+  TY +++ GLCK  ++  A  +L EMS  G  P V+TYN ++    
Sbjct: 321 LFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLIPSVVTYNALIDGYC 380

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G    A           C P   TY  LI  +CK+  + +A+ +L+ M     SP ++
Sbjct: 381 KEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMALLNKMLERKLSPSLI 440

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYNSL++  CK    + A  +++ +   G+ P+  TY+  + +L   G  +    + D +
Sbjct: 441 TYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTLCKEGRVEEAGTLFDSV 500

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                      Y  LI+G CK G +D A +   +M++  C P+  TYN ++  LCKE  +
Sbjct: 501 KAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKM 560

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA  L+  +      P ++TY  LI  + K G  + A+ ++  M+  G  PD  T+   
Sbjct: 561 KEASSLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAF 620

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           +  +     +EE  D++ ++ + G       Y ++I G  +      A   L+ M+ +  
Sbjct: 621 LHAYFSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGC 680

Query: 534 KPDDTVFSTIVKKVADDGMTEEA--------------YKLWQKLIEWKVFEKGTTL 575
           KP   + S ++K ++ +   +E               Y++  KL E K+ E G T+
Sbjct: 681 KPSLYIVSILIKNLSHENRMKETRSEIGIDSVSNTLEYEIALKLFE-KMVEHGCTI 735



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/412 (28%), Positives = 204/412 (49%), Gaps = 3/412 (0%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGV---PDTITYNMMVGGLCKRGQIRSAIALLDE 212
           I++I+    I+ +    +V + M   G     P    YN ++  L K   I     +  E
Sbjct: 125 ISMIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLE 184

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           +  +   P++ T+N ++      G   +A  +    ++ G  P   TYT LI   C+  G
Sbjct: 185 LLNNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKG 244

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           +  A EV   M  +GC  + V+Y +L++  C+ G+ ++A+ +  ++      P   TY  
Sbjct: 245 VDNAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTV 304

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L+++L   G       + + M E    P V TY +LI+GLCK   +D A    ++M  K 
Sbjct: 305 LIYALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKG 364

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             P +VTYN ++   CKEGM+++A ++L L+  +SC P   TYN LI GL KK  + KAM
Sbjct: 365 LIPSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAM 424

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  +M+E  +SP  IT+ +LI G C+ + +E A  LL  + + G       Y + I  L
Sbjct: 425 ALLNKMLERKLSPSLITYNSLIHGQCKVNDLESAYRLLSLMNENGLVPDQWTYSVFIDTL 484

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           CK  +V+ A  + + + +   K ++ +++ ++      G  + AY L ++++
Sbjct: 485 CKEGRVEEAGTLFDSVKAKGVKANEVIYTALIDGYCKVGKIDVAYSLLERML 536



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 183/400 (45%), Gaps = 17/400 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +E     ++  +C  GK+  A  L++ M     +P+ +    LI GL +  ++++AS
Sbjct: 505 VKANEVIYTALIDGYCKVGKIDVAYSLLERMLNDACLPNSYTYNVLIEGLCKEKKMKEAS 564

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M+  G  P  +TY +++G + K G    A+ + + M   G +PDV TY   L   
Sbjct: 565 SLVAKMLTMGVKPTVVTYTILIGEMLKDGAFDHALKVFNHMVSLGYQPDVCTYTAFLHAY 624

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F  G  ++          +G  P L+TYT+LI+   +     RA + L  M   GC P +
Sbjct: 625 FSQGMLEEVDDVIAKMNEEGILPDLVTYTVLIDGYARLGLTHRAFDFLKCMVDTGCKPSL 684

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
              + L+    K   +++ +    + +      N++ Y   L             K+ + 
Sbjct: 685 YIVSILI----KNLSHENRMKETRSEIGIDSVSNTLEYEIAL-------------KLFEK 727

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E   +  V  Y  LI G C+   ++ A    + M  +   P    YN++L   CK G+
Sbjct: 728 MVEHGCTIDVSIYGALIAGFCQQERLEEAQGLVHHMKERGMSPSEDIYNSLLDCCCKLGV 787

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             EA++L+  +  +   P L +Y  L+ GL  +G  EKA  ++  ++  G + D++  + 
Sbjct: 788 YAEAVRLVDAMVENGLLPLLESYKLLVCGLYIEGSNEKAKAVFHGLLSCGYNYDEVAWKV 847

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           LI G  + D V+E  +L+  + ++G +     Y L+I GL
Sbjct: 848 LIDGLLKRDLVDECSELIDIMEEKGCQPNPLTYSLLIEGL 887



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/309 (28%), Positives = 149/309 (48%), Gaps = 3/309 (0%)

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEG---CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           +I+  C    +   +EV   M  +G     P +  YN+++    K    D+   V   LL
Sbjct: 127 MIKSCCSIEDVLFVLEVFRKMNADGEFKFKPTLRCYNTILMSLSKFLLIDEMKTVYLELL 186

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           +  + PN  T+N +++     G     +     + +A   P  FTY  LI G C+   VD
Sbjct: 187 NNQISPNIYTFNAMVNGYCKIGNVVEAELYASKIVQAGLHPDTFTYTSLILGHCRNKGVD 246

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A   F  M  K CQ + V+Y  ++  LC+ G +NEAL+L   +   +C P + TY  LI
Sbjct: 247 NAYEVFLIMPQKGCQRNEVSYTNLIHGLCEAGRINEALKLFADMTEDNCCPTVRTYTVLI 306

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
             L+  G   +A+ L+ +M E G  P+  T+  LI G C+ ++++EA  +L E+ ++G  
Sbjct: 307 YALSGSGRKVEALNLFNEMKEKGCEPNVHTYTVLIDGLCKENKMDEARKMLSEMSEKGLI 366

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +I G CK   +D A ++L+LM S+   P+   ++ ++  +       +A  L
Sbjct: 367 PSVVTYNALIDGYCKEGMIDDAFEILDLMESNSCGPNTRTYNELICGLCKKRKVHKAMAL 426

Query: 560 WQKLIEWKV 568
             K++E K+
Sbjct: 427 LNKMLERKL 435


>gi|356529503|ref|XP_003533330.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 546

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 240/452 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  FC  G++T    ++  + +R   PD      LI+GL    +++KA 
Sbjct: 90  IQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKAL 149

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                ++  G   + ++Y  ++ G+CK G  R AI LL ++     +P+V  Y+TI+  +
Sbjct: 150 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 209

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                  +A G + +   KG    ++TY+ LI   C +  +  AI +L++M ++  +P++
Sbjct: 210 CKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNV 269

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN LV+  CK+GK  +A  V+  +L   ++P+ ITY+TL+              + + 
Sbjct: 270 YTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNA 329

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+    +P V TY ILING CK  +VD A+N F +M  KN  P IVTY++++  LCK G 
Sbjct: 330 MSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGR 389

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +     L+  +        +ITY++LIDGL K G +++A+ L+ +M +  I P+  T   
Sbjct: 390 IPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTI 449

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++++A ++ +++  +G  +    Y ++I+G CK   ++ A+ +L  M  + 
Sbjct: 450 LLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNG 509

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+   F TI+  +      ++A KL +++I
Sbjct: 510 CIPNAFTFETIIIALFKKDENDKAEKLLRQMI 541



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 224/443 (50%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           NKIL +F      + A  L   +  +   PD      LI     + +I     VL  ++ 
Sbjct: 63  NKILDSFAKMKHYSTAVSLSHRLELKGIQPDLITLNILINCFCHMGQITFGFSVLAKILK 122

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PDT+T N ++ GLC +GQ++ A+   D++   G + + ++Y T++  +   G  + 
Sbjct: 123 RGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRG 182

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI   +    +   P +  Y+ +I+ +CK   ++ A  +  +M ++G S D+VTY++L+ 
Sbjct: 183 AIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIY 242

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C +GK  +A+ ++N ++ + + PN  TYN L+ +L   G       +L +M +A   P
Sbjct: 243 GFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKP 302

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY+ L++G      V +A + FN M      PD+ TY  ++   CK  M++EAL L 
Sbjct: 303 DVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLF 362

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++  +  P ++TY++LIDGL K G +     L  +M + G   D IT+ +LI G C+ 
Sbjct: 363 KEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKN 422

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             ++ A+ L  ++  +  +     + +++ GLCK  ++  A +V + +++  Y  +   +
Sbjct: 423 GHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTY 482

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++      G+ EEA  +  K+
Sbjct: 483 NVMINGHCKQGLLEEALTMLSKM 505



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/375 (30%), Positives = 194/375 (51%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G    A KL+  +  R   P+      +I  L +   + +A  +   M + G
Sbjct: 170 LINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG 229

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              D +TY+ ++ G C  G+++ AI LL+EM +    P+V TYN ++  +   GK K+A 
Sbjct: 230 ISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAK 289

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 L+    P +ITY+ L++       + +A  V + M++ G +PD+ TY  L+N  
Sbjct: 290 SVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 349

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK    D+A+ +   +  + M P  +TY++L+  L   G    V  ++D M +      V
Sbjct: 350 CKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADV 409

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ LI+GLCK G +DRAI  FN+M  +  +P+I T+  +L  LCK G L +A ++   
Sbjct: 410 ITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQD 469

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L        + TYN +I+G  K+G +E+A+ +  +M +NG  P+  T  T+I    + D+
Sbjct: 470 LLTKGYHLNVYTYNVMINGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDE 529

Query: 483 VEEAVDLLKEIGKRG 497
            ++A  LL+++  RG
Sbjct: 530 NDKAEKLLRQMIARG 544



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 112/405 (27%), Positives = 202/405 (49%), Gaps = 2/405 (0%)

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           I  ++ A      M+     P  I +N ++    K     +A++L   + + G +PD+IT
Sbjct: 37  IQNVDDAVSQFNRMLCMRHTPPIIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLIT 96

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
            N ++      G+           L++G PP  +T   LI+ +C +  + +A+   D + 
Sbjct: 97  LNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVKKALHFHDKLL 156

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +G   + V+Y +L+N  CK G    A+ ++  +  R  +PN   Y+T++ +L       
Sbjct: 157 AQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVS 216

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +   M     S  V TY+ LI G C  G +  AI   N+MV K   P++ TYN ++
Sbjct: 217 EAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTINPNVYTYNILV 276

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            ALCKEG + EA  +L ++  +   P +ITY+TL+DG      ++KA  ++  M   G++
Sbjct: 277 DALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVT 336

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD  T+  LI GFC+   V+EA++L KE+ ++        Y  +I GLCKS ++     +
Sbjct: 337 PDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCKSGRIPYVWDL 396

Query: 525 LELMISSRYKPDDTV-FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++ M   R +P D + +S+++  +  +G  + A  L+ K+ + ++
Sbjct: 397 IDEM-RDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEI 440



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/416 (27%), Positives = 206/416 (49%), Gaps = 2/416 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           D  T N +++  C +G++  A    D ++A+  Q+    +   LI G+ +I     A K+
Sbjct: 128 DTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA-TLINGVCKIGDTRGAIKL 186

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+ +      P+   Y+ ++  LCK   +  A  L  EM+V G   DV+TY+T++     
Sbjct: 187 LRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCI 246

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK K+AIG   + + K   P + TY IL++ +CK+  +  A  VL  M      PD++T
Sbjct: 247 EGKLKEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVIT 306

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y++L++      +   A  V N +   G+ P+  TY  L++        D    +   M+
Sbjct: 307 YSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMH 366

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           + +  P + TY+ LI+GLCK G +    +  ++M  +    D++TY++++  LCK G L+
Sbjct: 367 QKNMVPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLD 426

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A+ L + +      P + T+  L+DGL K G ++ A  ++  ++  G   +  T+  +I
Sbjct: 427 RAIALFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMI 486

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            G C+   +EEA+ +L ++   G       +  +I  L K  + D A ++L  MI+
Sbjct: 487 NGHCKQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIA 542



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 102/385 (26%), Positives = 199/385 (51%)

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           + G  PD IT N+++   C  GQI    ++L ++   G  PD +T NT+++ +   G+ K
Sbjct: 87  LKGIQPDLITLNILINCFCHMGQITFGFSVLAKILKRGYPPDTVTLNTLIKGLCLKGQVK 146

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A+ F    L +G     ++Y  LI  VCK      AI++L  +      P++  Y++++
Sbjct: 147 KALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTII 206

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK     +A  + + +  +G+  + +TY+TL++     G       +L+ M   + +
Sbjct: 207 DALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKLKEAIGLLNEMVLKTIN 266

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P V+TYNIL++ LCK G V  A +    M+    +PD++TY+T++        + +A  +
Sbjct: 267 PNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTLMDGYFLVYEVKKAQHV 326

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            + ++    +P + TY  LI+G  K   +++A+ L+ +M +  + P  +T+ +LI G C+
Sbjct: 327 FNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNMVPGIVTYSSLIDGLCK 386

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           + ++    DL+ E+  RG       Y  +I GLCK+  +D AI +   M     +P+   
Sbjct: 387 SGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIALFNKMKDQEIRPNIFT 446

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLI 564
           F+ ++  +   G  ++A +++Q L+
Sbjct: 447 FTILLDGLCKGGRLKDAQEVFQDLL 471



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 181/355 (50%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG   + + +  + I+   C    +++A  L   M  +    D      LI G     ++
Sbjct: 191 DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIEGKL 250

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           ++A  +L  MV+    P+  TYN++V  LCK G+++ A ++L  M  +  +PDVITY+T+
Sbjct: 251 KEAIGLLNEMVLKTINPNVYTYNILVDALCKEGKVKEAKSVLAVMLKACVKPDVITYSTL 310

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +   F   + K+A   +      G  P + TYTILI   CK   +  A+ +  +M  +  
Sbjct: 311 MDGYFLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKNKMVDEALNLFKEMHQKNM 370

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P IVTY+SL++  CK G+      +I+ +  RG   + ITY++L+  L   G  D    
Sbjct: 371 VPGIVTYSSLIDGLCKSGRIPYVWDLIDEMRDRGQPADVITYSSLIDGLCKNGHLDRAIA 430

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + + M +    P +FT+ IL++GLCK G +  A   F  +++K    ++ TYN ++   C
Sbjct: 431 LFNKMKDQEIRPNIFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLNVYTYNVMINGHC 490

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           K+G+L EAL +L  +  + C P   T+ T+I  L KK   +KA  L  QM+  G+
Sbjct: 491 KQGLLEEALTMLSKMEDNGCIPNAFTFETIIIALFKKDENDKAEKLLRQMIARGL 545


>gi|116309903|emb|CAH66938.1| OSIGBa0116M22.5 [Oryza sativa Indica Group]
          Length = 568

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 127/408 (31%), Positives = 216/408 (52%), Gaps = 16/408 (3%)

Query: 83  HVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDI 142
           H+ +  K  R L + ++   P            +  T N ++  FCSRG++  A  ++  
Sbjct: 163 HLCSAGKPARALELLRQMPRP------------NAVTYNTVIAGFCSRGRVQAALDIMRE 210

Query: 143 MARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKR 200
           M  R  I P+ +    +I G  ++ R+++A KV   M+  G V P+ + YN ++GG C +
Sbjct: 211 MRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQ 270

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G++ +A+   D M   G    V TYN ++  +F +G+  +A    ++   KG    + TY
Sbjct: 271 GKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTY 330

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            ILI   CK+  + +A+E+ ++M+  G    +VTY SL+    K+G+  +   + +  + 
Sbjct: 331 NILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVR 390

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           RG+ P+ + YN L++S  + G  D   +I+  M +   +P   TYN L+ GLC  G VD 
Sbjct: 391 RGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDE 450

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A    ++M  +  QPD+VTYNT++     +G + +AL++ + +     +P L+TYN LI 
Sbjct: 451 ARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQ 510

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           GL K G  + A  +  +M+ENGI+PDD T+ +LI G    D  E A+D
Sbjct: 511 GLCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLTTED--ERAID 556



 Score =  212 bits (539), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 123/397 (30%), Positives = 206/397 (51%), Gaps = 6/397 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L++ CS GK   A +L+  M R N +        +I G     R++ A  +++ M
Sbjct: 156 TFNIMLRHLCSAGKPARALELLRQMPRPNAVT----YNTVIAGFCSRGRVQAALDIMREM 211

Query: 179 VMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNG 236
              GG+ P+  TY  ++ G CK G++  A+ + DEM   G  +P+ + YN ++    D G
Sbjct: 212 RERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCDQG 271

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K   A+ +    + +G    + TY +L+  +        A E++++M  +G + D+ TYN
Sbjct: 272 KLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFTYN 331

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L+N  CK+G    A+ +  N+  RG+    +TY +L+++L  +G     DK+ D     
Sbjct: 332 ILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAVRR 391

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P +  YN LIN     G +DRA     +M  K   PD VTYNT++  LC  G ++EA
Sbjct: 392 GIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVDEA 451

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +L+  +      P L+TYNTLI G + KG ++ A+ +  +MM  G +P  +T+  LI G
Sbjct: 452 RKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALIQG 511

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
            C+  Q ++A +++KE+ + G    +S Y  +I GL 
Sbjct: 512 LCKNGQGDDAENMVKEMVENGITPDDSTYISLIEGLT 548



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/393 (29%), Positives = 208/393 (52%), Gaps = 6/393 (1%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T+N+M+  LC  G+   A+ LL +M      P+ +TYNT++      G+ + A+   +
Sbjct: 154 TTTFNIMLRHLCSAGKPARALELLRQMP----RPNAVTYNTVIAGFCSRGRVQAALDIMR 209

Query: 247 D-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCK 304
           + + R G  P   TY  +I   CK   +  A++V D+M  +G   P+ V YN+L+   C 
Sbjct: 210 EMRERGGIAPNQYTYGTVISGWCKVGRVDEAVKVFDEMLTKGEVKPEAVMYNALIGGYCD 269

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           QGK D A+L  + ++ RG+     TYN L+H+L   G      ++++ M     +  VFT
Sbjct: 270 QGKLDTALLYRDRMVERGVAMTVATYNLLVHALFMDGRGTEAYELVEEMGGKGLALDVFT 329

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YNILING CK G V +A+  F  M  +  +  +VTY +++ AL K+G + E  +L     
Sbjct: 330 YNILINGHCKEGNVKKALEIFENMSRRGVRATVVTYTSLIYALSKKGQVQETDKLFDEAV 389

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P L+ YN LI+  +  G +++A  + G+M +  I+PDD+T+ TL+ G C   +V+
Sbjct: 390 RRGIRPDLVLYNALINSHSTSGNIDRAFEIMGEMEKKRIAPDDVTYNTLMRGLCLLGRVD 449

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  L+ E+ KRG +     Y  +I G      V  A+++   M++  + P    ++ ++
Sbjct: 450 EARKLIDEMTKRGIQPDLVTYNTLISGYSMKGDVKDALRIRNEMMNKGFNPTLLTYNALI 509

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           + +  +G  ++A  + ++++E  +    +T ++
Sbjct: 510 QGLCKNGQGDDAENMVKEMVENGITPDDSTYIS 542


>gi|302774757|ref|XP_002970795.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
 gi|302806735|ref|XP_002985099.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300147309|gb|EFJ13974.1| hypothetical protein SELMODRAFT_121414 [Selaginella moellendorffii]
 gi|300161506|gb|EFJ28121.1| hypothetical protein SELMODRAFT_441332 [Selaginella moellendorffii]
          Length = 543

 Score =  219 bits (557), Expect = 4e-54,   Method: Compositional matrix adjust.
 Identities = 137/483 (28%), Positives = 244/483 (50%), Gaps = 56/483 (11%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT--ITYNMMVGGLCKRGQ 202
           R   I +   C  L+R L++  R  +A ++ +  ++ G   DT  ITYN ++GG CK G 
Sbjct: 62  RGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELL-GQHCDTNHITYNTLIGGFCKAGD 120

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +  A  LL EM   G  PDV+T+++I++ + + G   +A+ ++++ +   C P  + + I
Sbjct: 121 MERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVE--CAPDSVLFNI 178

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L+  +CK   ++ A +++++M+  G  PD+VTYNSL++  CK  + ++A  ++  ++ R 
Sbjct: 179 LVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLETMVKRK 238

Query: 323 MEPNSITYNTLLHSLGSRGCW-----------------------------------DAVD 347
           + PN +TYNTL++     GC                                    D   
Sbjct: 239 VRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSKIDKAC 298

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++L +M +   +P + TYN+LI+GLC  G  + A    ++M  +   PDI+TYN+++G  
Sbjct: 299 EVLHLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYNSLIGIF 358

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C+   + +A Q+ +L+      P  I+Y TL   L K    ++A  L   M + G  P+ 
Sbjct: 359 CRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDAGAIPNL 418

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T  +L+ G C + +++EA  LL  + + G     S Y +++ GLCK+ +VD A +VL +
Sbjct: 419 FTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDAKEVLVM 478

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKL---------------WQKLIEW-KVFEK 571
           M+S   +P  +   TIV  +A +G  + A                  +QKL+E+ KV  +
Sbjct: 479 MVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLEFVKVLRE 538

Query: 572 GTT 574
           G +
Sbjct: 539 GKS 541



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 132/481 (27%), Positives = 238/481 (49%), Gaps = 14/481 (2%)

Query: 78  WSSESHV-------LAVNKKLRGLTITKKSHDPSLPSSD---GPFVENDEKTNNKILQNF 127
           W + SH           N  LR L   ++ H       D   G   + +  T N ++  F
Sbjct: 56  WVTRSHRGESIHNNFTCNCLLRTLVKARRHHQAYQIFRDELLGQHCDTNHITYNTLIGGF 115

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  G +  A +L+  M  R   PD     ++++ L     + +A +  +  V     PD+
Sbjct: 116 CKAGDMERAFQLLAEMKERGHSPDVVTHSSIVQALCNTGNLSRAMQYFRESVECA--PDS 173

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           + +N++V GLCK  Q+  A  +++EMS  G  PDV+TYN+++  +  + + ++A    + 
Sbjct: 174 VLFNILVHGLCKANQLSEARQMIEEMSERGIVPDVVTYNSLIDGLCKSYRMEEARQLLET 233

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            +++   P L+TY  LI   CK      A ++++ M   G  PD+VT+NSL++  C++ K
Sbjct: 234 MVKRKVRPNLVTYNTLIYGYCKTGCTGLAHQLIERMIQSGTHPDVVTFNSLISGFCQKSK 293

Query: 308 YDDAVLVINNLLSRGM-EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
            D A  V+ +L+ +G+  PN +TYN L+  L   G  +   ++L  M+     P + TYN
Sbjct: 294 IDKACEVL-HLMKKGLCAPNLVTYNVLISGLCDAGRANEACELLSEMDGRGILPDIITYN 352

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI   C+   +++A    N MV +   PD ++Y T+  AL K    +EA  LL  +  +
Sbjct: 353 SLIGIFCRNFQIEQAFQIQNLMVERGVIPDGISYCTLAVALLKSERFDEAFALLDNMFDA 412

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P L T+N+L++GL     +++A  L   M   G  P   T+  L+ G C+A +V++A
Sbjct: 413 GAIPNLFTFNSLMEGLCCSRRLDEARHLLAVMRRVGCDPAASTYEVLVTGLCKAGRVDDA 472

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            ++L  +   G +   S+   ++H L +  K D+A+   + ++++  K  D  +  +++ 
Sbjct: 473 KEVLVMMVSEGIQPLVSSSGTIVHTLAREGKQDLALHYFDQVVAAESKACDPSYQKLLEF 532

Query: 547 V 547
           V
Sbjct: 533 V 533


>gi|147862640|emb|CAN81487.1| hypothetical protein VITISV_033285 [Vitis vinifera]
          Length = 1024

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 128/443 (28%), Positives = 220/443 (49%), Gaps = 1/443 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +C    +  A +L+D M +RN +P       +I GL     +  A+K+L+ M  SG
Sbjct: 409 LIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSG 468

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ + Y++++      G+I  A  LLD MS SG  PD+  YN I+  +   GK ++A 
Sbjct: 469 LKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEAS 528

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            +  +   +G  P  +T+   I    K   +  A +  D+M   G  P+   Y  L+N  
Sbjct: 529 TYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGH 588

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K G   +A+ +   L + G+ P+  T +  +H L   G      K+   + E    P V
Sbjct: 589 FKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDV 648

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FTY+ LI+G CK G V++A    ++M  K   P+I  YN ++  LCK G +  A +L   
Sbjct: 649 FTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDG 708

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  +TY+T+IDG  K   + +A  L+ +M   G+ P    +  L+ G C+   
Sbjct: 709 MPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGD 768

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +E+A++L +E+ ++G     S +  +I G CKS K+  A Q+ + MI+ +  PD   ++T
Sbjct: 769 MEKAMNLFREMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTT 827

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++      G  EEA  L++++ E
Sbjct: 828 VIDWHCKAGKMEEANLLFKEMQE 850



 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 127/469 (27%), Positives = 234/469 (49%), Gaps = 5/469 (1%)

Query: 110  GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
            G  ++ D  T    +  +   GK+T+A+K  D M     +P+      LI G  +   + 
Sbjct: 536  GRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLM 595

Query: 170  KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            +A  + + +   G +PD  T +  + GL K G+++ A+ +  E+   G  PDV TY++++
Sbjct: 596  EALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLI 655

Query: 230  RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                  G+ ++A     +   KG  P +  Y  L++ +CK   I RA ++ D M  +G  
Sbjct: 656  SGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLE 715

Query: 290  PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            PD VTY+++++  CK     +A  + + + S+G++P+S  YN L+H     G    ++K 
Sbjct: 716  PDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEG---DMEKA 772

Query: 350  LDIMNEASHS--PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            +++  E       T  ++N LI+G CK   +  A   F +M++K   PD VTY TV+   
Sbjct: 773  MNLFREMLQKGFATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVIDWH 832

Query: 408  CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            CK G + EA  L   +   +     +TY +L+ G  K G   +   L+ +M+  G+ PD+
Sbjct: 833  CKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKPDE 892

Query: 468  ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            +T+  +I+  C+ D + EA  L  E+  +G   + + + L+I  LCK + +  A ++L+ 
Sbjct: 893  VTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLLDE 952

Query: 528  MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
            M     KP     +T+V+   + G  +EA ++++ +    +    TTL+
Sbjct: 953  MGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLI 1001



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/528 (24%), Positives = 236/528 (44%), Gaps = 75/528 (14%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I    C   ++ +A    + M +    PD++ C  LI G +R   I++  ++  +M
Sbjct: 300 TYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVM 359

Query: 179 VMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           V S G+P + ITYN+++ GLCK G++  A  +L  M   GC+P+  T+  ++        
Sbjct: 360 V-SCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHN 418

Query: 238 FKQAIGFWKDQLRK------------------------------------GCPPYLITYT 261
             +A+    D++ K                                    G  P ++ Y+
Sbjct: 419 MGRALELL-DEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYS 477

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           ILI     +  I  A  +LD M+  G +PDI  YN++++   K GK ++A   +  +  R
Sbjct: 478 ILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGR 537

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN----------- 370
           G++P+++T+   +      G      K  D M +    P    Y +LIN           
Sbjct: 538 GLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEA 597

Query: 371 ------------------------GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
                                   GL K G V  A+  F+++  K   PD+ TY++++  
Sbjct: 598 LSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISG 657

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK+G + +A +L   +     +P +  YN L+DGL K G +++A  L+  M E G+ PD
Sbjct: 658 FCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPD 717

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+ T+I G+C+++ V EA  L  E+  +G +  +  Y  ++HG CK   ++ A+ +  
Sbjct: 718 SVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEKAMNLFR 777

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            M+   +    + F+T++         +EA +L+Q++I  ++     T
Sbjct: 778 EMLQKGFATTLS-FNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVT 824



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/494 (25%), Positives = 227/494 (45%), Gaps = 42/494 (8%)

Query: 112 FVENDEKTNNK-------ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
            +E DEK  N        +++  C  G + +A +L   M  +  +P+ +    +  GL R
Sbjct: 251 LIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCR 310

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             R+ +A    + M  +G  PD    + ++ G  + G I   + + D M   G   ++IT
Sbjct: 311 AKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLIT 370

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN ++  +   GK ++A    K  +  GC P   T+ +LIE  C++  + RA+E+LD+M 
Sbjct: 371 YNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIEGYCREHNMGRALELLDEME 430

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
                P  V+Y +++N  C       A  ++  +   G++PN + Y+ L+ +  S G  +
Sbjct: 431 KRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTFSGLKPNVVVYSILIMAYASEGRIE 490

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT----- 399
              ++LD M+ +  +P +F YN +I+ L K G ++ A     ++  +  +PD VT     
Sbjct: 491 EARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEEASTYLLEIQGRGLKPDAVTFGAFI 550

Query: 400 ------------------------------YNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
                                         Y  ++    K G L EAL +   L+     
Sbjct: 551 LGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLINGHFKAGNLMEALSIFRRLHALGVL 610

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P + T +  I GL K G +++A+ ++ ++ E G+ PD  T+ +LI GFC+  +VE+A +L
Sbjct: 611 PDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTYSSLISGFCKQGEVEKAFEL 670

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             E+  +G       Y  ++ GLCKS  +  A ++ + M     +PD   +ST++     
Sbjct: 671 HDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPEKGLEPDSVTYSTMIDGYCK 730

Query: 550 DGMTEEAYKLWQKL 563
                EA+ L+ ++
Sbjct: 731 SENVAEAFSLFHEM 744



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/434 (26%), Positives = 205/434 (47%), Gaps = 1/434 (0%)

Query: 131  GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
            G L +A  +   +     +PD   C   I GL++  R+++A KV   +   G VPD  TY
Sbjct: 592  GNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVPDVFTY 651

Query: 191  NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
            + ++ G CK+G++  A  L DEM + G  P++  YN ++  +  +G  ++A   +     
Sbjct: 652  SSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLFDGMPE 711

Query: 251  KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            KG  P  +TY+ +I+  CK   +A A  +  +M  +G  P    YN+LV+  CK+G  + 
Sbjct: 712  KGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKEGDMEK 771

Query: 311  AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
            A+ +   +L +G    ++++NTL+             ++   M      P   TY  +I+
Sbjct: 772  AMNLFREMLQKGF-ATTLSFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTYTTVID 830

Query: 371  GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
              CK G ++ A   F +M  +N   D VTY +++    K G  +E   L   +      P
Sbjct: 831  WHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVAKGVKP 890

Query: 431  CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
              +TY  +I    K+  + +A  L  +++  G+      H  LI   C+ + + EA  LL
Sbjct: 891  DEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTEASKLL 950

Query: 491  KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
             E+G+ G K   +A   ++    ++ K+D A +V E + S    PD T    +V    +D
Sbjct: 951  DEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVNGNLND 1010

Query: 551  GMTEEAYKLWQKLI 564
              +E+A  L ++L+
Sbjct: 1011 TDSEDARNLIKQLV 1024



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 210/448 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G L  A +++  M  +   P+      +I G+ ++  I++A ++ 
Sbjct: 227 DVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAVELK 286

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G VP+T TY ++  GLC+  ++  A    +EM  +G +PD    + ++      
Sbjct: 287 RSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGFMRE 346

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   + +      +  G P  LITY +LI  +CK   + +A E+L  M   GC P+  T+
Sbjct: 347 GDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNSRTF 406

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+   C++     A+ +++ +  R + P++++Y  +++ L         +K+L+ M  
Sbjct: 407 CLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEKMTF 466

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P V  Y+ILI      G ++ A    + M      PDI  YN ++  L K G + E
Sbjct: 467 SGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGKMEE 526

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A   L  + G    P  +T+   I G +K G M +A   + +M+++G+ P++  +  LI 
Sbjct: 527 ASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTVLIN 586

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G  +A  + EA+ + + +   G           IHGL K+ +V  A++V   +      P
Sbjct: 587 GHFKAGNLMEALSIFRRLHALGVLPDVQTCSAFIHGLLKNGRVQEALKVFSELKEKGLVP 646

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D   +S+++      G  E+A++L  ++
Sbjct: 647 DVFTYSSLISGFCKQGEVEKAFELHDEM 674



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 210/441 (47%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ ++   G L +A+ +  +    + +     C +L++ L++   +E   KV   M+ + 
Sbjct: 164 LIDSYKRMGMLDEAANVFFVAKNDSILISLIRCNSLLKDLLKCGMMELFWKVYNGMLDAK 223

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              D  TY  +VG LCK G +R A  +L EM   G  P+   Y+ ++  M   G   +A+
Sbjct: 224 MGFDVYTYTYLVGALCKTGDLRGAKRVLIEMDEKGLNPNEFIYSLVIEGMCQVGDIDEAV 283

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +    KG  P   TYTI+   +C+   +  A    ++M   G  PD    ++L++  
Sbjct: 284 ELKRSMGEKGLVPNTYTYTIITAGLCRAKRMNEAKLTFEEMQKTGLKPDYNACSALIDGF 343

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            ++G  D+ + + + ++S G+  N ITYN L+H L   G  +   +IL  M      P  
Sbjct: 344 MREGDIDEVLRIKDVMVSCGIPINLITYNVLIHGLCKFGKMEKAAEILKGMVTLGCKPNS 403

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+ +LI G C+   + RA+   ++M  +N  P  V+Y  ++  LC    L+ A +LL  
Sbjct: 404 RTFCLLIEGYCREHNMGRALELLDEMEKRNLVPSAVSYGAMINGLCHCKDLSLANKLLEK 463

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  S   P ++ Y+ LI   A +G +E+A  L   M  +G++PD   +  +I    +A +
Sbjct: 464 MTFSGLKPNVVVYSILIMAYASEGRIEEARRLLDGMSCSGVAPDIFCYNAIISCLSKAGK 523

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +EEA   L EI  RG K     +   I G  K+ K+  A +  + M+     P++ +++ 
Sbjct: 524 MEEASTYLLEIQGRGLKPDAVTFGAFILGYSKTGKMTEAAKYFDEMLDHGLMPNNPLYTV 583

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++      G   EA  ++++L
Sbjct: 584 LINGHFKAGNLMEALSIFRRL 604



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 102/378 (26%), Positives = 183/378 (48%), Gaps = 1/378 (0%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T + ++  FC +G++  A +L D M  +   P+      L+ GL +   I++A K+ 
Sbjct: 647  DVFTYSSLISGFCKQGEVEKAFELHDEMCLKGIAPNIFIYNALVDGLCKSGDIQRARKLF 706

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              M   G  PD++TY+ M+ G CK   +  A +L  EM   G +P    YN ++      
Sbjct: 707  DGMPEKGLEPDSVTYSTMIDGYCKSENVAEAFSLFHEMPSKGVQPHSFVYNALVHGCCKE 766

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            G  ++A+  +++ L+KG    L ++  LI+  CK C I  A ++  +M  +   PD VTY
Sbjct: 767  GDMEKAMNLFREMLQKGFATTL-SFNTLIDGYCKSCKIQEASQLFQEMIAKQIMPDHVTY 825

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             +++++ CK GK ++A L+   +  R +  +++TY +L++     G    V  + + M  
Sbjct: 826  TTVIDWHCKAGKMEEANLLFKEMQERNLIVDTVTYTSLMYGYNKLGQSSEVFALFEKMVA 885

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                P   TY ++I   CK   +  A    +++V K        ++ ++ ALCK   L E
Sbjct: 886  KGVKPDEVTYGLVIYAHCKEDNLVEAFKLRDEVVGKGMLTKGTIHDLLITALCKREDLTE 945

Query: 416  ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            A +LL  +      P L   NTL+    + G M++A  ++  +   G+ PD  T   L+ 
Sbjct: 946  ASKLLDEMGELGLKPSLAACNTLVRSFHEAGKMDEATRVFEGVKSLGLVPDTTTLIDLVN 1005

Query: 476  GFCRADQVEEAVDLLKEI 493
            G       E+A +L+K++
Sbjct: 1006 GNLNDTDSEDARNLIKQL 1023



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 79/337 (23%), Positives = 141/337 (41%), Gaps = 53/337 (15%)

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
           F+  Q + G P +L +++IL  Q+C       A  VL  M     S   +  + L  F  
Sbjct: 93  FYWSQSQMGVPQFLDSFSILAVQLCNSELFGLANGVLTQMIRTPYSSSSILDSVLFWFRN 152

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
             G                   + + ++ L+ S    G  D    +  +    S   ++ 
Sbjct: 153 YGGS------------------SPVVFDILIDSYKRMGMLDEAANVFFVAKNDSILISLI 194

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
             N L+  L K G+++     +N M+      D+ TY  ++GALCK G L  A ++L  +
Sbjct: 195 RCNSLLKDLLKCGMMELFWKVYNGMLDAKMGFDVYTYTYLVGALCKTGDLRGAKRVLIEM 254

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
           +    +P    Y+ +I+G+ + G +++A+ L   M E G+ P+  T+  +  G CRA ++
Sbjct: 255 DEKGLNPNEFIYSLVIEGMCQVGDIDEAVELKRSMGEKGLVPNTYTYTIITAGLCRAKRM 314

Query: 484 EEAVDLLKEIGKRGNK-------------MRNS----------------------AYRLV 508
            EA    +E+ K G K             MR                         Y ++
Sbjct: 315 NEAKLTFEEMQKTGLKPDYNACSALIDGFMREGDIDEVLRIKDVMVSCGIPINLITYNVL 374

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           IHGLCK  K++ A ++L+ M++   KP+   F  +++
Sbjct: 375 IHGLCKFGKMEKAAEILKGMVTLGCKPNSRTFCLLIE 411


>gi|359485438|ref|XP_003633275.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Vitis vinifera]
          Length = 572

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 140/489 (28%), Positives = 238/489 (48%), Gaps = 6/489 (1%)

Query: 95  TITKKSHDPSLPS----SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           +IT+  H  ++ S     D   + ++  T N ++ +FC   +L  A  ++  + +    P
Sbjct: 63  SITRMKHYSTVLSLYKQMDSFGIPHNTYTLNILINSFCHLNRLGFAFSVLGDILKLGYQP 122

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
                  LIRGL    +I +A ++   M   G  PD +TY  ++ GLCK G   +AI  L
Sbjct: 123 STATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFL 182

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
             M    C P V+ Y+TI+ ++  + +  +A+  + D L KG  P   TY+ LI  +C  
Sbjct: 183 RSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCIL 242

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
                AI +   M      PD +T+N+LV+  CK+G    A  V++ ++   ++P+ +TY
Sbjct: 243 GHWKEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTY 302

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N+L+     R        + D M      P+V +Y  LING CK  ++D+A+  F +M  
Sbjct: 303 NSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQ 362

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +   PD VTYNT++  LC  G L +A+ L H +      P L+TY  L D L K   + +
Sbjct: 363 QGLIPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAE 422

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           AMVL   +    + PD   +  ++ G CRA ++E A DL  ++  +G       Y ++I+
Sbjct: 423 AMVLLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMIN 482

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE--WKV 568
           GLC+   +  A ++   M  +   P+   ++ I +    +  T  A +L+Q+++   + +
Sbjct: 483 GLCQQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSI 542

Query: 569 FEKGTTLLA 577
               TTLL 
Sbjct: 543 DVSTTTLLV 551



 Score =  218 bits (555), Expect = 8e-54,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 228/447 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++  C  GK+ +A +L D M      PD      LI GL ++     A + L+ M
Sbjct: 126 TFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIRFLRSM 185

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P  + Y+ ++  LCK  Q+  A++L  +M   G  P+  TY++++  +   G +
Sbjct: 186 EQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLCILGHW 245

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+AI  +   + +   P  +T+  L++ +CK+  + +A  V+D M      PD+VTYNSL
Sbjct: 246 KEAIRLFYAMIHRKIMPDQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSL 305

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C + +    V V + ++ +G  P+ I+Y TL++        D    + + M++   
Sbjct: 306 MDGHCLRSEMGKTVNVFDTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGL 365

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TYN LI+GLC  G +  AI  F++MV     PD+VTY  +   LCK   L EA+ 
Sbjct: 366 IPDTVTYNTLIHGLCHVGRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMV 425

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL ++ G++  P +  Y+ ++DG+ + G +E A  L+ ++   G+ PD  T+  +I G C
Sbjct: 426 LLKVIEGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLC 485

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +   + EA  L  E+ + G       Y L+  G  ++ +   AIQ+ + M+S  +  D +
Sbjct: 486 QQGLLAEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVS 545

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
             + +V+ ++DDG+ +   ++  + ++
Sbjct: 546 TTTLLVEMLSDDGLDQSVKQILCEFVQ 572



 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/432 (28%), Positives = 226/432 (52%), Gaps = 6/432 (1%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGGVP-DTITYN 191
           DA  L + M R    P     ++  + L  I R++  S VL +   + S G+P +T T N
Sbjct: 37  DALSLFNRMLRMRPPPSI---VDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLN 93

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           +++   C   ++  A ++L ++   G +P   T+ T++R +   GK  +A+  +     +
Sbjct: 94  ILINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGE 153

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P ++TY  LI  +CK    + AI  L  M    C P +V Y+++++  CK  +  +A
Sbjct: 154 GFQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEA 213

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + + +++L++G+ PN+ TY++L+H L   G W    ++   M      P   T+N L++ 
Sbjct: 214 LSLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDA 273

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           LCK G+V +A    + M+  + +PD+VTYN+++   C    + + + +   +    C P 
Sbjct: 274 LCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPS 333

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           +I+Y TLI+G  K   M+KAM L+ +M + G+ PD +T+ TLI G C   ++ +A+ L  
Sbjct: 334 VISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFH 393

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           E+   G       YR++   LCK+ ++  A+ +L+++  +   PD  ++S ++  +   G
Sbjct: 394 EMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIYSIVMDGMCRAG 453

Query: 552 MTEEAYKLWQKL 563
             E A  L+ KL
Sbjct: 454 ELEAARDLFSKL 465



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 92/364 (25%), Positives = 182/364 (50%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           I  A++L + M      P ++ ++ +L ++     +   +  +K     G P    T  I
Sbjct: 35  IDDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNI 94

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI   C    +  A  VL D+   G  P   T+ +L+   C +GK  +A+ + + +   G
Sbjct: 95  LINSFCHLNRLGFAFSVLGDILKLGYQPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEG 154

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +P+ +TY TL++ L   G      + L  M + +  PTV  Y+ +I+ LCK   +  A+
Sbjct: 155 FQPDVLTYGTLINGLCKVGNTSTAIRFLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEAL 214

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           + F+ M++K   P+  TY++++  LC  G   EA++L + +      P  +T+NTL+D L
Sbjct: 215 SLFSDMLAKGISPNNFTYSSLIHGLCILGHWKEAIRLFYAMIHRKIMPDQLTFNTLVDAL 274

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+G + KA  +   M+++ + PD +T+ +L+ G C   ++ + V++   + ++G     
Sbjct: 275 CKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVFDTMVRKGCVPSV 334

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            +Y  +I+G CK + +D A+ + E M      PD   ++T++  +   G   +A  L+ +
Sbjct: 335 ISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHVGRLRDAIALFHE 394

Query: 563 LIEW 566
           ++ +
Sbjct: 395 MVVY 398



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/305 (28%), Positives = 151/305 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T N ++   C  G +  A  ++D+M + +  PD     +L+ G      + K   V 
Sbjct: 263 DQLTFNTLVDALCKEGMVVKAHYVVDVMIQSDLKPDVVTYNSLMDGHCLRSEMGKTVNVF 322

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G VP  I+Y  ++ G CK   +  A+ L +EMS  G  PD +TYNT++  +   
Sbjct: 323 DTMVRKGCVPSVISYTTLINGYCKIQIMDKAMGLFEEMSQQGLIPDTVTYNTLIHGLCHV 382

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ + AI  + + +  G  P L+TY IL + +CK   +A A+ +L  +      PDI  Y
Sbjct: 383 GRLRDAIALFHEMVVYGQIPDLVTYRILFDYLCKNHRLAEAMVLLKVIEGTNLDPDIHIY 442

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + +++  C+ G+ + A  + + L S+G+ P+  TY  +++ L  +G      K+   M+E
Sbjct: 443 SIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLLAEASKLFGEMDE 502

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SP   TYN++  G  +     RAI  F +M+S+    D+ T   ++  L  +G+   
Sbjct: 503 NGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLLVEMLSDDGLDQS 562

Query: 416 ALQLL 420
             Q+L
Sbjct: 563 VKQIL 567



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/267 (23%), Positives = 113/267 (42%), Gaps = 35/267 (13%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           DDA+ + N +L     P+ + ++ LL S+     +  V  +   M+        +T NIL
Sbjct: 36  DDALSLFNRMLRMRPPPSIVDFSKLLTSITRMKHYSTVLSLYKQMDSFGIPHNTYTLNIL 95

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN  C    +  A                    +VLG + K G                 
Sbjct: 96  INSFCHLNRLGFAF-------------------SVLGDILKLGY---------------- 120

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P   T+ TLI GL  +G + +A+ L+ +M   G  PD +T+ TLI G C+      A+ 
Sbjct: 121 QPSTATFTTLIRGLCVEGKIGEALQLFDKMTGEGFQPDVLTYGTLINGLCKVGNTSTAIR 180

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
            L+ + +R  +     Y  +I  LCK +++  A+ +   M++    P++  +S+++  + 
Sbjct: 181 FLRSMEQRNCRPTVVVYSTIIDSLCKDRQLTEALSLFSDMLAKGISPNNFTYSSLIHGLC 240

Query: 549 DDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             G  +EA +L+  +I  K+     T 
Sbjct: 241 ILGHWKEAIRLFYAMIHRKIMPDQLTF 267



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 33/128 (25%), Positives = 58/128 (45%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           +G  ++ D    + ++   C  G+L  A  L   ++ +   PD      +I GL +   +
Sbjct: 431 EGTNLDPDIHIYSIVMDGMCRAGELEAARDLFSKLSSKGLHPDVRTYTIMINGLCQQGLL 490

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +ASK+   M  +G  P+  TYN++  G  +  +   AI L  EM   G   DV T   +
Sbjct: 491 AEASKLFGEMDENGCSPNACTYNLITRGFLRNNETLRAIQLFQEMLSRGFSIDVSTTTLL 550

Query: 229 LRTMFDNG 236
           +  + D+G
Sbjct: 551 VEMLSDDG 558


>gi|302799687|ref|XP_002981602.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
 gi|300150768|gb|EFJ17417.1| hypothetical protein SELMODRAFT_114819 [Selaginella moellendorffii]
          Length = 628

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 233/458 (50%), Gaps = 22/458 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T + +L+  C  G+L  A +L+  +       +      +I G  +  R++ A ++ 
Sbjct: 72  DDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIF 131

Query: 176 QIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           + M   GG VPD +T+N ++ GLC   ++  A  L + M+ +GCEP+VI+Y+T+L  +  
Sbjct: 132 KTMSAGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCK 191

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+  +A   W++ + K C P L+ YT  +  +CK   +A A +    M  +G   D V 
Sbjct: 192 AGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVA 251

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +++++   CK+G  ++A                   N ++  L   G  D   K  + M 
Sbjct: 252 FSTVIGILCKKGHAEEA------------------QNQMIEHLCRSGMLDEACKTFEEMI 293

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN---CQPDIVTYNTVLGALCKEG 411
             +H P+   +N LI+ +CK   +   +  F +M S     C P++ TYN ++  LCK  
Sbjct: 294 SRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAK 353

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L+EA +L++ +     SP ++TY+ L+DGL K G +++A  L  +M + G+ PD  T  
Sbjct: 354 QLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDA 413

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +++    +A +V+ A+  L+ +  RG+      Y  ++ GLCK+ ++D AI  L  M+++
Sbjct: 414 SILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAA 473

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           +  PD   ++ I+  +   G    A+ ++Q++++  V 
Sbjct: 474 KCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVL 511



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 213/426 (50%), Gaps = 23/426 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + +L   C  G+L +A +L + M  ++ +PD     + + GL + +R+ +A    + MV 
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242

Query: 181 SGGVPDTITYNMMVGGLCKRGQ-----------------IRSAIALLDEMSVSGCEPDVI 223
            G   D + ++ ++G LCK+G                  +  A    +EM      P   
Sbjct: 243 KGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302

Query: 224 TYNTILRTMFDNGKFKQAIGFW---KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
            +NT++  +  + +    +  +   K      CPP L TY I+++ +CK   +  A E++
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           ++MA  G SPD+VTY++LV+  CK GK D A  ++  +   G+ P+S T  ++L++L   
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G  D     L+ M     +P + TYN L++GLCK G +D AI    +MV+  C PD+ +Y
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             ++ ALC+ G    A  +   +      P  + Y++L+DGLA+ G  + A+ L    + 
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL- 541

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
               PD + H+ ++ G C+A + E+A ++++ +   G       Y  V+ GL K  KVD 
Sbjct: 542 --CKPDFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDK 599

Query: 521 AIQVLE 526
           A Q+++
Sbjct: 600 ARQLVD 605



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 198/436 (45%), Gaps = 56/436 (12%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            TYN  +  L K    + A     +M   G  PD  TY+ +LR +   G+  +A      
Sbjct: 39  FTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQ 98

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM-AIEGCSPDIVTYNSLVNFSCKQG 306
               G    +ITY+++I+  CK   +  A+E+   M A  GC PD+VT+NSL+   C   
Sbjct: 99  LRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSLLKGLCSGE 158

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           +  +A ++   +   G EPN I+Y+TLL  L   G  D   ++ + M E S  P +  Y 
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE---------------- 410
             + GLCK   V  A +   +MV+K  + D V ++TV+G LCK+                
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCR 278

Query: 411 -GMLNEALQ-------------------LLHLLNGSS-------------------CSPC 431
            GML+EA +                   L+H +  S                    C P 
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           L TYN ++D L K   +++A  L  +M   G+SPD +T+  L+ G C+  +++ A DLL+
Sbjct: 339 LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           E+ K G    +     +++ L K+ KVD A+  LE M +    PD   ++T++  +   G
Sbjct: 399 EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAG 458

Query: 552 MTEEAYKLWQKLIEWK 567
             +EA     K++  K
Sbjct: 459 RIDEAITFLAKMVAAK 474



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 95/356 (26%), Positives = 169/356 (47%), Gaps = 6/356 (1%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E+  N+++++ C  G L +A K  + M  RN  P       LI  + +  R+     + Q
Sbjct: 266 EEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQ 325

Query: 177 IMVMSGGV---PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            M         P+  TYN+MV  LCK  Q+  A  L++EM+  G  PDV+TY+ ++  + 
Sbjct: 326 RMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLC 385

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK  +A    ++  ++G  P   T   ++  + K   +  A+  L+ M   G +PD+V
Sbjct: 386 KLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLV 445

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L++  CK G+ D+A+  +  +++    P+  +Y  ++ +L   G       I   M
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEM 505

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P    Y+ L++GL + GL D A+      +   C+PD V +  V+  LCK G  
Sbjct: 506 VKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVVDGLCKAGKA 562

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            +A +++  +  +       TY  ++ GL K G ++KA  L     E   S + ++
Sbjct: 563 EDACEVVERMADAGFPADAFTYINVVRGLRKLGKVDKARQLVDDASETHTSVERLS 618



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 57/413 (13%)

Query: 201 GQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
           G+I + + L D +    G +  V TYN  L  +      + A   ++   R+G PP   T
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 260 YTILIEQVCKQCGIARAIEVLD---------------------------DMAIE------ 286
           Y+I++  +CK   + +A E+L                            D A+E      
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 287 ---GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              GC PD+VT+NSL+   C   +  +A ++   +   G EPN I+Y+TLL  L   G  
Sbjct: 136 AGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           D   ++ + M E S  P +  Y   + GLCK   V  A +   +MV+K  + D V ++TV
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255

Query: 404 LGALCKE-----------------GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +G LCK+                 GML+EA +    +   +  P    +NTLI  + K  
Sbjct: 256 IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315

Query: 447 CMEKAMVLYGQM--MENGISPDDI-THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
            +   ++L+ +M  M+    P ++ T+  ++   C+A Q++EA +L+ E+   G      
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVV 375

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
            Y  ++ GLCK  K+D A  +LE M      PD    ++I+  ++  G  + A
Sbjct: 376 TYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 73/251 (29%), Positives = 127/251 (50%), Gaps = 16/251 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++   C  GKL  A  L++ M++    PD     +++  L +  +++ A   L
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD +TYN ++ GLCK G+I  AI  L +M  + C PDV +Y  I+  +  +
Sbjct: 433 ETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-----GCSP 290
           G+   A   +++ +++G  P  + Y  L++      G+AR    L+D+A+E      C P
Sbjct: 493 GQAAGAHAIFQEMVKRGVLPDTVLYHSLLD------GLAR--NGLEDLALELLKTSLCKP 544

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D V +  +V+  CK GK +DA  V+  +   G   ++ TY  ++  L   G    VDK  
Sbjct: 545 DFVMHKMVVDGLCKAGKAEDACEVVERMADAGFPADAFTYINVVRGLRKLG---KVDKAR 601

Query: 351 DIMNEASHSPT 361
            ++++AS + T
Sbjct: 602 QLVDDASETHT 612



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/211 (29%), Positives = 106/211 (50%), Gaps = 1/211 (0%)

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +  +  +VFTYN  ++ L K      A   F QM  +   PD  TY+ VL  LCK G L+
Sbjct: 31  QKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELD 90

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NGISPDDITHRTL 473
           +A +LL  L  S     +ITY+ +IDG  K   ++ A+ ++  M    G  PD +T  +L
Sbjct: 91  KAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSAGGGCVPDVVTFNSL 150

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           + G C  +++ EA  L + + K G +    +Y  ++ GLCK+ ++D A ++ E M+    
Sbjct: 151 LKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSC 210

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            PD   +++ V  +       EA    +K++
Sbjct: 211 VPDLVAYTSFVTGLCKANRVAEACDCCRKMV 241


>gi|356522850|ref|XP_003530056.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 137/482 (28%), Positives = 246/482 (51%), Gaps = 13/482 (2%)

Query: 95  TITKKSHDPSLPSSDGPF----VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           +  K  H P++ S         ++ D  T N ++  FC  G++  A  ++  + +    P
Sbjct: 72  SFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSVLSKILKWGYQP 131

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D      LI+GL    +++KA      ++  G   D ++Y  ++ G+CK G+ R+AI LL
Sbjct: 132 DTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCKIGETRAAIQLL 191

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
             +     EP+V+ YNTI+  +       +A   + +   KG    ++TY+ +I   C  
Sbjct: 192 RRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTYSAIIHGFCIV 251

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             +  A+  L++M ++  +PD+  YN+LV+   K+GK  +A  V+  ++   ++PN ITY
Sbjct: 252 GKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVKTCLKPNVITY 311

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           NTL+              + + +     +P V++YNI+IN LCK   V+ A+N + +M  
Sbjct: 312 NTLIDGYAKH--------VFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKEMHQ 363

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           KN  P+ VTYN+++  LCK G ++ A  L+  ++       +ITYN+LI+GL K G ++K
Sbjct: 364 KNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQLDK 423

Query: 451 AMVLYGQMMENGISPDDITHRTLIWG-FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           A+ L  +M + GI PD  T   L+ G  C+  +++ A  L +++  +G       Y ++I
Sbjct: 424 AIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLDKGYHPNVYTYNIII 483

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           +G CK   +D A  +   M  S   P+   F  I+  + + G T++A KL  ++I   + 
Sbjct: 484 YGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDKAEKLLCEMIARGLL 543

Query: 570 EK 571
           ++
Sbjct: 544 KR 545



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 210/432 (48%), Gaps = 27/432 (6%)

Query: 77  EWSSESHVLAVNKKLRGLTI---TKKS---HDPSLPSSDGPFVENDEKTNNKILQNFCSR 130
           +W  +   + +   ++GL +    KK+   HD  L          D+ +   ++   C  
Sbjct: 126 KWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG----FRLDQVSYGTLINGVCKI 181

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G+   A +L+  +  R   P+      +I  L +   + +A  +   M + G   + +TY
Sbjct: 182 GETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVTY 241

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           + ++ G C  G++  A+  L+EM +    PDV  YNT++  +   GK K+A       ++
Sbjct: 242 SAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIVK 301

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
               P +ITY  LI+   K         V + + + G +PD+ +YN ++N  CK  + ++
Sbjct: 302 TCLKPNVITYNTLIDGYAKH--------VFNAVGLMGVTPDVWSYNIMINRLCKIKRVEE 353

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRG----CWDAVDKILDIMNEASHSPTVFTYN 366
           A+ +   +  + M PN++TYN+L+  L   G     WD +D+    M++  H   V TYN
Sbjct: 354 ALNLYKEMHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDE----MHDRGHHANVITYN 409

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL-GALCKEGMLNEALQLLHLLNG 425
            LINGLCK G +D+AI   N+M  +  QPD+ T N +L G LCK   L  A  L   L  
Sbjct: 410 SLINGLCKNGQLDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLD 469

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P + TYN +I G  K+G +++A  L  +M ++G SP+ IT + +I       + ++
Sbjct: 470 KGYHPNVYTYNIIIYGHCKEGLLDEAYALQSKMEDSGCSPNAITFKIIICALLEKGETDK 529

Query: 486 AVDLLKEIGKRG 497
           A  LL E+  RG
Sbjct: 530 AEKLLCEMIARG 541



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 115/409 (28%), Positives = 197/409 (48%), Gaps = 28/409 (6%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P  I +N ++    K     + ++L   + +   +PD  T N ++      G+   A   
Sbjct: 61  PPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFSV 120

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
               L+ G  P  +T T LI+ +C +  + +A+   D +  +G   D V+Y +L+N  CK
Sbjct: 121 LSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVCK 180

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            G+   A+ ++  +  R  EPN + YNT++  L  R        +   M+    S  V T
Sbjct: 181 IGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVVT 240

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y+ +I+G C  G +  A+   N+MV K   PD+  YNT++ AL KEG + EA  +L ++ 
Sbjct: 241 YSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVIV 300

Query: 425 GSSCSPCLITYNTLIDGLAKK-----GCM----------------------EKAMVLYGQ 457
            +   P +ITYNTLIDG AK      G M                      E+A+ LY +
Sbjct: 301 KTCLKPNVITYNTLIDGYAKHVFNAVGLMGVTPDVWSYNIMINRLCKIKRVEEALNLYKE 360

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M +  + P+ +T+ +LI G C++ ++  A DL+ E+  RG+      Y  +I+GLCK+ +
Sbjct: 361 MHQKNMVPNTVTYNSLIDGLCKSGRISYAWDLIDEMHDRGHHANVITYNSLINGLCKNGQ 420

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG-MTEEAYKLWQKLIE 565
           +D AI ++  M     +PD    + ++  +   G   + A  L+Q L++
Sbjct: 421 LDKAIALINKMKDQGIQPDMYTLNILLHGLLCKGKRLKNAQGLFQDLLD 469



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 71/269 (26%), Positives = 136/269 (50%), Gaps = 5/269 (1%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P I+ +N +++   K   Y   V +   L  + ++P+  T N L++     G  +    
Sbjct: 60  TPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNILINCFCHLGQINLAFS 119

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  + +  + P   T   LI GLC  G V +A++  ++++++  + D V+Y T++  +C
Sbjct: 120 VLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGFRLDQVSYGTLINGVC 179

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G    A+QLL  ++G    P ++ YNT+ID L K+  + +A  L+ +M   GIS + +
Sbjct: 180 KIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACNLFSEMSVKGISANVV 239

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  +I GFC   ++ EA+  L E+  +        Y  ++  L K  KV  A  VL ++
Sbjct: 240 TYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALHKEGKVKEAKNVLAVI 299

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           + +  KP+   ++T++     DG  +  +
Sbjct: 300 VKTCLKPNVITYNTLI-----DGYAKHVF 323



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 68/248 (27%), Positives = 115/248 (46%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           DDA+   + +L     P  I +N +L S      +  V  +   +   +  P  FT NIL
Sbjct: 45  DDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNIL 104

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN  C  G ++ A +  ++++    QPD VT  T++  LC +G + +AL     L     
Sbjct: 105 INCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQGF 164

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
               ++Y TLI+G+ K G    A+ L  ++      P+ + + T+I   C+   V EA +
Sbjct: 165 RLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEACN 224

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L  E+  +G       Y  +IHG C   K+  A+  L  M+     PD  +++T+V  + 
Sbjct: 225 LFSEMSVKGISANVVTYSAIIHGFCIVGKLTEALGFLNEMVLKAINPDVYIYNTLVDALH 284

Query: 549 DDGMTEEA 556
            +G  +EA
Sbjct: 285 KEGKVKEA 292



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 47/186 (25%), Positives = 91/186 (48%)

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           VD A+  F++M+     P I+ +N +L +  K       + L   L   +  P   T N 
Sbjct: 44  VDDALFQFHRMLCMRHTPPIIQFNKILDSFAKMKHYPTVVSLSRRLELKAIQPDFFTLNI 103

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+     G +  A  +  ++++ G  PD +T  TLI G C   QV++A+    ++  +G
Sbjct: 104 LINCFCHLGQINLAFSVLSKILKWGYQPDTVTLTTLIKGLCLKGQVKKALHFHDKLLAQG 163

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            ++   +Y  +I+G+CK  +   AIQ+L  +     +P+  +++TI+  +    +  EA 
Sbjct: 164 FRLDQVSYGTLINGVCKIGETRAAIQLLRRIDGRLTEPNVVMYNTIIDCLCKRKLVSEAC 223

Query: 558 KLWQKL 563
            L+ ++
Sbjct: 224 NLFSEM 229


>gi|302825350|ref|XP_002994298.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
 gi|300137829|gb|EFJ04642.1| hypothetical protein SELMODRAFT_138440 [Selaginella moellendorffii]
          Length = 577

 Score =  218 bits (556), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 233/448 (52%), Gaps = 6/448 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC  G++  A +L+D M  R    D      LI+GL R  RI++A +  + M    
Sbjct: 5   VINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMGEEC 64

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEM-----SVSGCEPDVITYNTILRTMFDNGK 237
             P+ ITYN +V GLCK  +I   + L D+M     +  GCEPDVI+Y+T++  +    +
Sbjct: 65  S-PNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQR 123

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A  ++K     GC P ++TY+ LI+ +CK   +  A  +L  +  E   P  + YN+
Sbjct: 124 VDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMYYNA 183

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +VN   +QGK  + + ++ ++  +G   N I +N +LH+L      +   +  + + ++ 
Sbjct: 184 VVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 243

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TYN+ ++GLCK G VD A     +MV     PD++TY++++   CK G +++A 
Sbjct: 244 KKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKAD 303

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +   +    C P  +T+ TL+ G ++     +A  ++  M+  G  P   T+  L+   
Sbjct: 304 DVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCV 363

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C AD VE A+++  ++ ++  +   + Y  +I  LC++++VD A + L++M +    P+ 
Sbjct: 364 CGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNG 423

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +   +V+ +   G  +EA  +   ++E
Sbjct: 424 AICHALVEVLCKQGEVDEACSVLDNVVE 451



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 110/457 (24%), Positives = 218/457 (47%), Gaps = 19/457 (4%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  + + ++   C   ++  A +    M      P+     +LI GL ++DR+++A  
Sbjct: 105 EPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYS 164

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L  +     VP  + YN +V G  ++G+    + LL  M   G   ++I +N +L  ++
Sbjct: 165 LLMQLKGEDMVPRAMYYNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALW 224

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            N + ++A  F++  L+ G  P ++TY + +  +CK   +  A  +L +M     +PD++
Sbjct: 225 KNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKVTPDVI 284

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY+S+++  CK G+ D A  V   ++     P+ +T+ TLLH            ++ + M
Sbjct: 285 TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDM 344

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
             A   P + TYN+L++ +C    V+ A+  +++M  K  QPD  TY  ++  LC+   +
Sbjct: 345 VNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCLCRARRV 404

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM-------------------EKAMVL 454
           +EA + L ++   +  P     + L++ L K+G +                   ++A+ +
Sbjct: 405 DEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEPDEAVEV 464

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             QM+  G+ PD+ T+  ++   C  D+V+ A+   +++  RG       Y L+I   C 
Sbjct: 465 IEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLLIGEACS 524

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           +   D A ++ E M+++ + P      T+   + D G
Sbjct: 525 ADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAG 561



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 80/279 (28%), Positives = 152/279 (54%), Gaps = 6/279 (2%)

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +++N  CK G+ D A  +++ +  RG++ + + ++TL+  L  +G  D   +    M 
Sbjct: 2   YTTVINGFCKAGQVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG 61

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQM-----VSKNCQPDIVTYNTVLGALCK 409
           E   SP V TYN ++NGLCK   +D  +  F+ M      S  C+PD+++Y+TV+ ALCK
Sbjct: 62  EEC-SPNVITYNTVVNGLCKANRIDEGLELFDDMEKRYEASHGCEPDVISYSTVIDALCK 120

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              +++A +    +    C+P ++TY++LIDGL K   +++A  L  Q+    + P  + 
Sbjct: 121 AQRVDKAYEYFKRMRAVGCAPNVVTYSSLIDGLCKVDRVDEAYSLLMQLKGEDMVPRAMY 180

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  ++ GF R  +  E ++LL  + ++G  +    +  ++H L K+ + + A Q  E ++
Sbjct: 181 YNAVVNGFKRQGKPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLL 240

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            S  KP+   ++  V  +   G  +EAY++  +++E KV
Sbjct: 241 KSGKKPNVVTYNVAVHGLCKAGKVDEAYRILLEMVESKV 279



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 69/286 (24%), Positives = 117/286 (40%), Gaps = 19/286 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T + I+  FC  G++  A  +   M     IP     + L+ G     +  +A 
Sbjct: 279 VTPDVITYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAF 338

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V + MV +G +P   TYN+++  +C    + SA+ +  +M     +PD  TY  +++ +
Sbjct: 339 RVHEDMVNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDANTYAPLIQCL 398

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ------CGIA------------ 274
               +  +A  F          P       L+E +CKQ      C +             
Sbjct: 399 CRARRVDEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEICKAGEP 458

Query: 275 -RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A+EV++ M ++G  PD  TY +++   C   + D A+     + SRG  P  +TY  L
Sbjct: 459 DEAVEVIEQMVLKGVRPDEATYVAVLRSLCGLDRVDSAIAEFEKMASRGCAPGLVTYTLL 518

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           +    S    D   +I + M  A  +P   T   L + L   G  D
Sbjct: 519 IGEACSADMADDAFRIFEAMVAAGFTPQAQTMRTLSSCLRDAGYQD 564


>gi|302759537|ref|XP_002963191.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
 gi|300168459|gb|EFJ35062.1| hypothetical protein SELMODRAFT_80491 [Selaginella moellendorffii]
          Length = 628

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 233/458 (50%), Gaps = 22/458 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T + +L+  C  G+L  A +L+  +       +      +I G  +  R++ A ++ 
Sbjct: 72  DDFTYSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIF 131

Query: 176 QIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           + M   GG VPD +T+N ++ GLC   ++  A  L + M+ +GCEP+VI+Y+T+L  +  
Sbjct: 132 KTMSSGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCK 191

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+  +A   W++ + K C P L+ YT  +  +CK   +A A +    M  +G   D V 
Sbjct: 192 AGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVA 251

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +++++   CK+G  ++A                   N ++  L   G  D   K  + M 
Sbjct: 252 FSTVIGILCKKGHAEEA------------------QNQMIEHLCRSGMLDEACKTFEEMI 293

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN---CQPDIVTYNTVLGALCKEG 411
             +H P+   +N LI+ +CK   +   +  F +M S     C P++ TYN ++  LCK  
Sbjct: 294 SRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAK 353

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L+EA +L++ +     SP ++TY+ L+DGL K G +++A  L  +M + G+ PD  T  
Sbjct: 354 QLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDA 413

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +++    +A +V+ A+  L+ +  RG+      Y  ++ GLCK+ ++D AI  L  M+++
Sbjct: 414 SILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAA 473

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           +  PD   ++ I+  +   G    A+ ++Q++++  V 
Sbjct: 474 KCTPDVFSYTIIITALCRSGQAAGAHAIFQEMVKRGVL 511



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/426 (28%), Positives = 213/426 (50%), Gaps = 23/426 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + +L   C  G+L +A +L + M  ++ +PD     + + GL + +R+ +A    + MV 
Sbjct: 183 STLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVT 242

Query: 181 SGGVPDTITYNMMVGGLCKRGQ-----------------IRSAIALLDEMSVSGCEPDVI 223
            G   D + ++ ++G LCK+G                  +  A    +EM      P   
Sbjct: 243 KGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAE 302

Query: 224 TYNTILRTMFDNGKFKQAIGFW---KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
            +NT++  +  + +    +  +   K      CPP L TY I+++ +CK   +  A E++
Sbjct: 303 LFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELV 362

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           ++MA  G SPD+VTY++LV+  CK GK D A  ++  +   G+ P+S T  ++L++L   
Sbjct: 363 NEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKA 422

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G  D     L+ M     +P + TYN L++GLCK G +D AI    +MV+  C PD+ +Y
Sbjct: 423 GKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSY 482

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             ++ ALC+ G    A  +   +      P  + Y++L+DGLA+ G  + A+ L    + 
Sbjct: 483 TIIITALCRSGQAAGAHAIFQEMVKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL- 541

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
               PD + H+ ++ G C+A + E+A ++++ +   G       Y  V+ GL K  KVD 
Sbjct: 542 --CKPDFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDK 599

Query: 521 AIQVLE 526
           A Q+++
Sbjct: 600 ARQLVD 605



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 198/436 (45%), Gaps = 56/436 (12%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            TYN  +  L K    + A     +M   G  PD  TY+ +LR +   G+  +A      
Sbjct: 39  FTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLGQ 98

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-EGCSPDIVTYNSLVNFSCKQG 306
               G    +ITY+++I+  CK   +  A+E+   M+   GC PD+VT+NSL+   C   
Sbjct: 99  LRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSGE 158

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           +  +A ++   +   G EPN I+Y+TLL  L   G  D   ++ + M E S  P +  Y 
Sbjct: 159 RMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRLDEACRLWEEMVEKSCVPDLVAYT 218

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE---------------- 410
             + GLCK   V  A +   +MV+K  + D V ++TV+G LCK+                
Sbjct: 219 SFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTVIGILCKKGHAEEAQNQMIEHLCR 278

Query: 411 -GMLNEALQ-------------------LLHLLNGSS-------------------CSPC 431
            GML+EA +                   L+H +  S                    C P 
Sbjct: 279 SGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQRMKSMKEFYCPPN 338

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           L TYN ++D L K   +++A  L  +M   G+SPD +T+  L+ G C+  +++ A DLL+
Sbjct: 339 LETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLCKLGKLDRACDLLE 398

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           E+ K G    +     +++ L K+ KVD A+  LE M +    PD   ++T++  +   G
Sbjct: 399 EMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLVTYNTLLDGLCKAG 458

Query: 552 MTEEAYKLWQKLIEWK 567
             +EA     K++  K
Sbjct: 459 RIDEAITFLAKMVAAK 474



 Score =  151 bits (381), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 96/356 (26%), Positives = 170/356 (47%), Gaps = 6/356 (1%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E+  N+++++ C  G L +A K  + M  RN  P       LI  + +  R+     + Q
Sbjct: 266 EEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSKRLPDGVLLFQ 325

Query: 177 IMVMSGGV---PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            M         P+  TYN+MV  LCK  Q+  A  L++EM+  G  PDV+TY+ ++  + 
Sbjct: 326 RMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVVTYSALVDGLC 385

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK  +A    ++  ++G  P   T   ++  + K   +  A+  L+ M   G +PD+V
Sbjct: 386 KLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHLETMKARGSTPDLV 445

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L++  CK G+ D+A+  +  +++    P+  +Y  ++ +L   G       I   M
Sbjct: 446 TYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRSGQAAGAHAIFQEM 505

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P    Y+ L++GL + GL D A+      +   C+PD V +  VL  LCK G  
Sbjct: 506 VKRGVLPDTVLYHSLLDGLARNGLEDLALELLKTSL---CKPDFVMHKMVLDGLCKAGKA 562

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            +A +++  +  +       TY +++ GL K G ++KA  L     E   S + ++
Sbjct: 563 EDACEVVERMADAGFPADAFTYISVVSGLRKLGKVDKARQLVDDASETHTSVERLS 618



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 111/413 (26%), Positives = 185/413 (44%), Gaps = 57/413 (13%)

Query: 201 GQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
           G+I + + L D +    G +  V TYN  L  +      + A   ++   R+G PP   T
Sbjct: 16  GKISTIVRLFDWLGRQKGYQHSVFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFT 75

Query: 260 YTILIEQVCKQCGIARAIEVLD---------------------------DMAIE------ 286
           Y+I++  +CK   + +A E+L                            D A+E      
Sbjct: 76  YSIVLRGLCKAGELDKAKELLGQLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMS 135

Query: 287 ---GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              GC PD+VT+NSL+   C   +  +A ++   +   G EPN I+Y+TLL  L   G  
Sbjct: 136 SGGGCVPDVVTFNSLLKGLCSGERMSEAFVLFEYMAKAGCEPNVISYSTLLDGLCKAGRL 195

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           D   ++ + M E S  P +  Y   + GLCK   V  A +   +MV+K  + D V ++TV
Sbjct: 196 DEACRLWEEMVEKSCVPDLVAYTSFVTGLCKANRVAEACDCCRKMVTKGSKADAVAFSTV 255

Query: 404 LGALCKE-----------------GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +G LCK+                 GML+EA +    +   +  P    +NTLI  + K  
Sbjct: 256 IGILCKKGHAEEAQNQMIEHLCRSGMLDEACKTFEEMISRNHPPSAELFNTLIHAVCKSK 315

Query: 447 CMEKAMVLYGQM--MENGISPDDI-THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
            +   ++L+ +M  M+    P ++ T+  ++   C+A Q++EA +L+ E+   G      
Sbjct: 316 RLPDGVLLFQRMKSMKEFYCPPNLETYNIMVDNLCKAKQLDEAQELVNEMANYGLSPDVV 375

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
            Y  ++ GLCK  K+D A  +LE M      PD    ++I+  ++  G  + A
Sbjct: 376 TYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYA 428



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/251 (28%), Positives = 128/251 (50%), Gaps = 16/251 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++   C  GKL  A  L++ M++    PD     +++  L +  +++ A   L
Sbjct: 373 DVVTYSALVDGLCKLGKLDRACDLLEEMSKEGVFPDSFTDASILNALSKAGKVDYALSHL 432

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD +TYN ++ GLCK G+I  AI  L +M  + C PDV +Y  I+  +  +
Sbjct: 433 ETMKARGSTPDLVTYNTLLDGLCKAGRIDEAITFLAKMVAAKCTPDVFSYTIIITALCRS 492

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-----GCSP 290
           G+   A   +++ +++G  P  + Y  L++      G+AR    L+D+A+E      C P
Sbjct: 493 GQAAGAHAIFQEMVKRGVLPDTVLYHSLLD------GLAR--NGLEDLALELLKTSLCKP 544

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D V +  +++  CK GK +DA  V+  +   G   ++ TY +++  L   G    VDK  
Sbjct: 545 DFVMHKMVLDGLCKAGKAEDACEVVERMADAGFPADAFTYISVVSGLRKLG---KVDKAR 601

Query: 351 DIMNEASHSPT 361
            ++++AS + T
Sbjct: 602 QLVDDASETHT 612



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 41/131 (31%), Positives = 73/131 (55%), Gaps = 1/131 (0%)

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           + TYN  +D LAK    + A   + QM   G  PDD T+  ++ G C+A ++++A +LL 
Sbjct: 38  VFTYNCFLDALAKANAGQLAYEKFQQMQRRGYPPDDFTYSIVLRGLCKAGELDKAKELLG 97

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS-SRYKPDDTVFSTIVKKVADD 550
           ++ + G K+    Y +VI G CK+ +VD A+++ + M S     PD   F++++K +   
Sbjct: 98  QLRESGVKLNVITYSVVIDGCCKASRVDDALEIFKTMSSGGGCVPDVVTFNSLLKGLCSG 157

Query: 551 GMTEEAYKLWQ 561
               EA+ L++
Sbjct: 158 ERMSEAFVLFE 168


>gi|297797449|ref|XP_002866609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312444|gb|EFH42868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 724

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 132/437 (30%), Positives = 234/437 (53%), Gaps = 9/437 (2%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           ++ +A +L++ M     +PD     ++I GL + DRI +A+K++  M++ G  PD ITY 
Sbjct: 261 RVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYG 320

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            ++ GLCK G++ +A  L   +     +P  + +NT++     +G+   A     D +  
Sbjct: 321 YLMNGLCKIGRVDAAKDLFYRIP----KPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTS 376

Query: 252 -GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P + TY  LI    K+  +  A+EVL DM  +GC P++ +Y  LV+  CK GK D+
Sbjct: 377 YGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDE 436

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  ++N + + G++PN++ +N L+ +           +I   M      P V+T+N LI+
Sbjct: 437 AYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLIS 496

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH--LLNGSSC 428
           GLC+   +  A+     M+S+    + VTYNT++ A  + G + EA +L++  +  GS  
Sbjct: 497 GLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLL 556

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
               ITYN+LI GL + G ++KA  L+ +M+ +G+ P  I+   LI G CR+  VEEAV+
Sbjct: 557 DE--ITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVE 614

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
             KE+  RG+      +  +I+GLC++ +++  + +   + +    PD   ++T++  + 
Sbjct: 615 FQKEMVLRGSTPDIVTFNSLINGLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLC 674

Query: 549 DDGMTEEAYKLWQKLIE 565
             G   +A  L  + IE
Sbjct: 675 KGGFVYDACLLLDEGIE 691



 Score =  209 bits (531), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 227/430 (52%), Gaps = 6/430 (1%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A+   D+++R+     F F + +++ L  ++ ++ A  VL+ M   G VP+++ Y  ++ 
Sbjct: 196 ANVFYDMLSRKIPPTLFTFGV-VMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIH 254

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
            L K  ++  A+ LL+EM + GC PD  T+N ++  +    +  +A       L +G  P
Sbjct: 255 SLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTP 314

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
             ITY  L+  +CK   I R ++   D+      P  V +N+L++     G+ DDA  V+
Sbjct: 315 DDITYGYLMNGLCK---IGR-VDAAKDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVL 370

Query: 316 NNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           ++++ S G+ P+  TYN+L++    +G      ++L  M      P V++Y IL++G CK
Sbjct: 371 SDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCK 430

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G +D A N  N+M +   +P+ V +N ++ A CKE  + EA+++   +    C P + T
Sbjct: 431 LGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYT 490

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           +N+LI GL +   ++ A+ L   M+  G+  + +T+ TLI  F R  +++EA  L+ E+ 
Sbjct: 491 FNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMV 550

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
            +G+ +    Y  +I GLC++ +VD A  + E M+     P     + ++  +   GM E
Sbjct: 551 FQGSLLDEITYNSLIKGLCRAGEVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVE 610

Query: 555 EAYKLWQKLI 564
           EA +  ++++
Sbjct: 611 EAVEFQKEMV 620



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 219/436 (50%), Gaps = 32/436 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCIN--------------- 157
           D +T N ++   C   ++ +A+K+++ M  R   PD   + + +N               
Sbjct: 280 DAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLF 339

Query: 158 -------------LIRGLIRIDRIEKASKVLQIMVMSGG-VPDTITYNMMVGGLCKRGQI 203
                        LI G +   R++ A  VL  MV S G VPD  TYN ++ G  K+G +
Sbjct: 340 YRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLV 399

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A+ +L +M   GC+P+V +Y  ++      GK  +A     +    G  P  + +  L
Sbjct: 400 GLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCL 459

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I   CK+  I  A+E+  +M  +GC PD+ T+NSL++  C+  +   A+ ++ +++S G+
Sbjct: 460 ISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGV 519

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             N++TYNTL+++   RG      K+++ M          TYN LI GLC+ G VD+A +
Sbjct: 520 VANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDKARS 579

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +M+     P  ++ N ++  LC+ GM+ EA++    +     +P ++T+N+LI+GL 
Sbjct: 580 LFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLINGLC 639

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           + G +E  + ++ ++   GI PD +T+ TL+   C+   V +A  LL E  + G    + 
Sbjct: 640 RAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDACLLLDEGIEDGFVPNDR 699

Query: 504 AYRLVIHGLCKSKKVD 519
            + +++  L   + +D
Sbjct: 700 TWSILLQSLVPQETLD 715



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 226/442 (51%), Gaps = 5/442 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C+  ++  A  ++  M +   +P+      LI  L + +R+ +A ++L+ M + G
Sbjct: 217 VMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMG 276

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD  T+N ++ GLCK  +I  A  +++ M + G  PD ITY  ++  +   G+   A 
Sbjct: 277 CVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAA- 335

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNF 301
              KD   +   P  + +  LI        +  A  VL DM    G  PD+ TYNSL+  
Sbjct: 336 ---KDLFYRIPKPTSVIFNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYG 392

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             K+G    A+ V+ ++ ++G +PN  +Y  L+      G  D    +L+ M+     P 
Sbjct: 393 YWKKGLVGLALEVLRDMRNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPN 452

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
              +N LI+  CK   +  A+  F +M  K C+PD+ T+N+++  LC+   +  AL LL 
Sbjct: 453 TVGFNCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLR 512

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +         +TYNTLI+   ++G +++A  L  +M+  G   D+IT+ +LI G CRA 
Sbjct: 513 DMISEGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAG 572

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V++A  L +++ + G    + +  ++I+GLC+S  V+ A++  + M+     PD   F+
Sbjct: 573 EVDKARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFN 632

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
           +++  +   G  E+   +++KL
Sbjct: 633 SLINGLCRAGRIEDGLTMFRKL 654



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 194/381 (50%), Gaps = 5/381 (1%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P   +YN+++  L      + A  +  +M      P + T+  +++ +    +   A+  
Sbjct: 174 PTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALSV 233

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            +D  + GC P  + Y  LI  + K   +  A+++L++M + GC PD  T+N ++   CK
Sbjct: 234 LRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLCK 293

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             + ++A  ++N +L RG  P+ ITY  L++ L   G  DA   +   + +    PT   
Sbjct: 294 FDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPK----PTSVI 349

Query: 365 YNILINGLCKYGLVDRAINSFNQMV-SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           +N LI+G   +G +D A    + MV S    PD+ TYN+++    K+G++  AL++L  +
Sbjct: 350 FNTLIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRDM 409

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
               C P + +Y  L+DG  K G +++A  L  +M  +G+ P+ +    LI  FC+  ++
Sbjct: 410 RNKGCKPNVYSYTILVDGFCKLGKIDEAYNLLNEMSADGLKPNTVGFNCLISAFCKEHRI 469

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            EAV++ +E+ ++G K     +  +I GLC+  ++  A+ +L  MIS     +   ++T+
Sbjct: 470 PEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMISEGVVANTVTYNTL 529

Query: 544 VKKVADDGMTEEAYKLWQKLI 564
           +      G  +EA KL  +++
Sbjct: 530 INAFLRRGEIKEARKLVNEMV 550



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 85/261 (32%), Positives = 145/261 (55%), Gaps = 2/261 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC   ++ +A ++   M R+   PD +   +LI GL  +D I+ A  +L+ M+ 
Sbjct: 457 NCLISAFCKEHRIPEAVEIFREMPRKGCKPDVYTFNSLISGLCEVDEIKHALWLLRDMIS 516

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G V +T+TYN ++    +RG+I+ A  L++EM   G   D ITYN++++ +   G+  +
Sbjct: 517 EGVVANTVTYNTLINAFLRRGEIKEARKLVNEMVFQGSLLDEITYNSLIKGLCRAGEVDK 576

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   ++  LR G  P  I+  ILI  +C+   +  A+E   +M + G +PDIVT+NSL+N
Sbjct: 577 ARSLFEKMLRDGLVPSSISCNILINGLCRSGMVEEAVEFQKEMVLRGSTPDIVTFNSLIN 636

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHS 359
             C+ G+ +D + +   L + G+ P+++TYNTL+  L   G  +DA   +LD   E    
Sbjct: 637 GLCRAGRIEDGLTMFRKLQAEGIPPDTVTYNTLMSWLCKGGFVYDAC-LLLDEGIEDGFV 695

Query: 360 PTVFTYNILINGLCKYGLVDR 380
           P   T++IL+  L     +DR
Sbjct: 696 PNDRTWSILLQSLVPQETLDR 716



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 72/241 (29%), Positives = 119/241 (49%), Gaps = 5/241 (2%)

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           EP   +YN +L  L S  C      +   M      PT+FT+ +++  LC    VD A++
Sbjct: 173 EPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFTFGVVMKALCAVNEVDSALS 232

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               M    C P+ V Y T++ +L K   +NEALQLL  +    C P   T+N +I GL 
Sbjct: 233 VLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMFLMGCVPDAETFNDVILGLC 292

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K   + +A  +  +M+  G +PDDIT+  L+ G C+  +V+ A DL   I K  + + N+
Sbjct: 293 KFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVDAAKDLFYRIPKPTSVIFNT 352

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSR-YKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
               +IHG     ++D A  VL  M++S    PD   +++++      G+   A ++ + 
Sbjct: 353 ----LIHGFVTHGRLDDAKAVLSDMVTSYGIVPDVCTYNSLIYGYWKKGLVGLALEVLRD 408

Query: 563 L 563
           +
Sbjct: 409 M 409



 Score = 78.2 bits (191), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 112/249 (44%), Gaps = 11/249 (4%)

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY----- 375
           +G   +   Y  L+  LGS G +  +D++L  M +      VF  ++ I+ +  Y     
Sbjct: 99  KGYRHSFDVYQVLIGKLGSNGEFKTIDRLLMQMKDEG---IVFKESLFISIMRDYDKAGF 155

Query: 376 -GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G   R +     + S  C+P   +YN VL  L        A  + + +      P L T
Sbjct: 156 PGQTTRLMLEMRNVYS--CEPTFKSYNVVLEILVSGNCHKVAANVFYDMLSRKIPPTLFT 213

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           +  ++  L     ++ A+ +   M ++G  P+ + ++TLI    + ++V EA+ LL+E+ 
Sbjct: 214 FGVVMKALCAVNEVDSALSVLRDMTKHGCVPNSVIYQTLIHSLSKCNRVNEALQLLEEMF 273

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
             G       +  VI GLCK  +++ A +++  M+   + PDD  +  ++  +   G  +
Sbjct: 274 LMGCVPDAETFNDVILGLCKFDRINEAAKMVNRMLIRGFTPDDITYGYLMNGLCKIGRVD 333

Query: 555 EAYKLWQKL 563
            A  L+ ++
Sbjct: 334 AAKDLFYRI 342


>gi|6692112|gb|AAF24577.1|AC007764_19 F22C12.14 [Arabidopsis thaliana]
          Length = 661

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 227/453 (50%), Gaps = 14/453 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++ FC   KL+ +      + +    PD      L+ GL   DRI +A  +   MV 
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204

Query: 181 SGGV----------PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           +G +          P  IT+N ++ GLC  G++  A AL+++M   G   DV+TY TI+ 
Sbjct: 205 TGSLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVN 264

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            M   G  K A+            P ++ Y+ +I+++CK    + A  +  +M  +G +P
Sbjct: 265 GMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAP 324

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           ++ TYN +++  C  G++ DA  ++ +++ R + P+ +T+N L+ +    G     +K+ 
Sbjct: 325 NVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLC 384

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           D M      P   TYN +I G CK+   D A + F+ M S    PD+VT+NT++   C+ 
Sbjct: 385 DEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRA 440

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             ++E +QLL  ++         TYNTLI G  +   +  A  L+ +M+ +G+ PD IT 
Sbjct: 441 KRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITC 500

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             L++GFC  +++EEA++L + I      +   AY ++IHG+CK  KVD A  +   +  
Sbjct: 501 NILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPI 560

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              +PD   ++ ++          +A  L+ K+
Sbjct: 561 HGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 593



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 232/488 (47%), Gaps = 52/488 (10%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCI----------NLIRGLIRI 165
           D  T N +L   C   ++++A  L   M     + D    I           LI GL   
Sbjct: 175 DVVTFNTLLHGLCLEDRISEALALFGYMVETGSLFDQMVEIGLTPVVITFNTLINGLCLE 234

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
            R+ +A+ ++  MV  G   D +TY  +V G+CK G  +SA+ LL +M  +  +PDV+ Y
Sbjct: 235 GRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIY 294

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           + I+  +  +G    A   + + L KG  P + TY  +I+  C     + A  +L DM  
Sbjct: 295 SAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIE 354

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
              +PD++T+N+L++ S K+GK  +A  + + +L R + P+++TYN++++       +D 
Sbjct: 355 REINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDD 414

Query: 346 VDKILDIMNEASHSPTVF---------------------------------TYNILINGL 372
              + D+M  AS     F                                 TYN LI+G 
Sbjct: 415 AKHMFDLM--ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGF 472

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           C+   ++ A + F +M+S    PD +T N +L   C+   L EAL+L  ++  S      
Sbjct: 473 CEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDT 532

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           + YN +I G+ K   +++A  L+  +  +G+ PD  T+  +I GFC    + +A  L  +
Sbjct: 533 VAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHK 592

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD--- 549
           +   G++  NS Y  +I G  K+ ++D +I+++  M S+ +  D    +  +K VAD   
Sbjct: 593 MKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD----AFTIKMVADLIT 648

Query: 550 DGMTEEAY 557
           DG  ++++
Sbjct: 649 DGRLDKSF 656



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 216/439 (49%), Gaps = 14/439 (3%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L DA    D M R         C  +I   +R++R + A  + + M +     +  ++N+
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK------ 246
           ++   C   ++  +++   +++  G +PDV+T+NT+L  +    +  +A+  +       
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVETG 206

Query: 247 ---DQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              DQ+ + G  P +IT+  LI  +C +  +  A  +++ M  +G   D+VTY ++VN  
Sbjct: 207 SLFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGM 266

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G    A+ +++ +    ++P+ + Y+ ++  L   G       +   M E   +P V
Sbjct: 267 CKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNV 326

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FTYN +I+G C +G    A      M+ +   PD++T+N ++ A  KEG L EA +L   
Sbjct: 327 FTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDE 386

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  +TYN++I G  K    + A  ++  M     SPD +T  T+I  +CRA +
Sbjct: 387 MLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTFNTIIDVYCRAKR 442

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V+E + LL+EI +RG     + Y  +IHG C+   ++ A  + + MIS    PD    + 
Sbjct: 443 VDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNI 502

Query: 543 IVKKVADDGMTEEAYKLWQ 561
           ++    ++   EEA +L++
Sbjct: 503 LLYGFCENEKLEEALELFE 521



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 138/303 (45%), Gaps = 5/303 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++      GKL +A KL D M  R   PD     ++I G  + +R + A  + 
Sbjct: 360 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 419

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M      PD +T+N ++   C+  ++   + LL E+S  G   +  TYNT++    + 
Sbjct: 420 DLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 475

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A   +++ +  G  P  IT  IL+   C+   +  A+E+ + + +     D V Y
Sbjct: 476 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 535

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N +++  CK  K D+A  +  +L   G+EP+  TYN ++     +      + +   M +
Sbjct: 536 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 595

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             H P   TYN LI G  K G +D++I   ++M S     D  T   V   L  +G L++
Sbjct: 596 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV-ADLITDGRLDK 654

Query: 416 ALQ 418
           +  
Sbjct: 655 SFS 657



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 134/299 (44%), Gaps = 25/299 (8%)

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           AI +   M I     +I ++N L+   C   K   ++     L   G +P+ +T+NTLLH
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L    C +  D+I       S +  +F Y +    L            F+QMV     P
Sbjct: 185 GL----CLE--DRI-------SEALALFGYMVETGSL------------FDQMVEIGLTP 219

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
            ++T+NT++  LC EG + EA  L++ + G      ++TY T+++G+ K G  + A+ L 
Sbjct: 220 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 279

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M E  I PD + +  +I   C+     +A  L  E+ ++G       Y  +I G C  
Sbjct: 280 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 339

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            +   A ++L  MI     PD   F+ ++     +G   EA KL  +++   +F    T
Sbjct: 340 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 398


>gi|47550658|dbj|BAD20284.1| hypothetical protein [Oryza sativa Indica Group]
          Length = 791

 Score =  218 bits (555), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 134/481 (27%), Positives = 235/481 (48%), Gaps = 37/481 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  +   ++  F   G    A      M  R   PD     ++I  L +   ++KA +VL
Sbjct: 195 DVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVL 254

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV +G +P+ +TYN ++ G C   Q + AI  L +M   G EPDV+TYN+++  +  N
Sbjct: 255 TTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKN 314

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITY----------------------------------- 260
           G+  +A   +    ++G  P + TY                                   
Sbjct: 315 GRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVF 374

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            ILI    KQ  +  A+ V   M   G +P++VTY +++   CK G  DDA+L    ++ 
Sbjct: 375 NILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMID 434

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDK-ILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            G+ PN I Y +L+HSL     WD  ++ IL++++      T+F +N +I+  CK G V 
Sbjct: 435 EGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIF-FNSIIHSHCKEGRVI 493

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            +   F+ MV    +P+++TY+T++   C  G ++EA +LL  +      P  +TYNTLI
Sbjct: 494 ESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLI 553

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +G  +   M+ A+ L+ +M+ +G+SP+ IT+  ++ G     +   A +L   I K G +
Sbjct: 554 NGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQ 613

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +  S Y +++HGLCK+   D A+++ + +  +  + +   F+ ++  +   G  +EA  L
Sbjct: 614 LELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDL 673

Query: 560 W 560
           +
Sbjct: 674 F 674



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/460 (28%), Positives = 228/460 (49%), Gaps = 16/460 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARR----NQIPDFHFCINLIRGLIRIDRIEKASKV 174
           T   +L+  C+  + +DA   +DI+ RR    + +PD   C  L++GL   +R ++A ++
Sbjct: 124 TFTPLLKGLCADKRTSDA---MDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALEL 180

Query: 175 LQIMV---MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           L +M      G  PD ++Y  ++ G  K G    A +   EM      PDV+TY++I+  
Sbjct: 181 LHMMADDRGGGSAPDVVSYTTVINGFFKEGDSDKAYSTYHEMLDRRISPDVVTYSSIIAA 240

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +       +A+      ++ G  P  +TY  ++   C       AI  L  M  +G  PD
Sbjct: 241 LCKGQAMDKAMEVLTTMVKNGVMPNCMTYNSILHGYCSSEQPKEAIGFLKKMRSDGVEPD 300

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VTYNSL+++ CK G+  +A  + +++  RG+EP+  TY TLL    ++G    +  +LD
Sbjct: 301 VVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGALVEMHALLD 360

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           +M      P    +NILI    K   VD A+  F++M      P++VTY  V+G LCK G
Sbjct: 361 LMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGAVIGILCKSG 420

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +++A+     +     +P +I Y +LI  L      +KA  L  +M++ GI  + I   
Sbjct: 421 SVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRGICLNTIFFN 480

Query: 472 TLIWGFCRADQV---EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           ++I   C+  +V   E+  DL+  IG + N +    Y  +I G C + K+D A ++L  M
Sbjct: 481 SIIHSHCKEGRVIESEKLFDLMVRIGVKPNVI---TYSTLIDGYCLAGKMDEATKLLSSM 537

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            S   KPD   ++T++         ++A  L+++++   V
Sbjct: 538 FSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGV 577



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 217/462 (46%), Gaps = 3/462 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE D  T N ++   C  G+ T+A K+ D M +R   PD      L++G      
Sbjct: 294 SDG--VEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTKRGLEPDIATYCTLLQGYATKGA 351

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  PD   +N+++    K+ ++  A+ +  +M   G  P+V+TY  
Sbjct: 352 LVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAMLVFSKMRQHGLNPNVVTYGA 411

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G    A+ +++  + +G  P +I YT LI  +C      +A E++ +M   G
Sbjct: 412 VIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSLCIFDKWDKAEELILEMLDRG 471

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              + + +NS+++  CK+G+  ++  + + ++  G++PN ITY+TL+      G  D   
Sbjct: 472 ICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNVITYSTLIDGYCLAGKMDEAT 531

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K+L  M      P   TYN LING C+   +D A+  F +MVS    P+I+TYN +L  L
Sbjct: 532 KLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 591

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
                   A +L   +  S     L TYN ++ GL K    ++A+ ++  +    +  + 
Sbjct: 592 FHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 651

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T   +I    +  + +EA DL       G       YRL+   +     ++   Q+   
Sbjct: 652 RTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFFS 711

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           M  +    D  + + IV+++   G    A   +  +I+ K F
Sbjct: 712 MEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEKHF 752



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 115/422 (27%), Positives = 205/422 (48%), Gaps = 12/422 (2%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + D + RR +    +    L R L  + R   A+ V +   M  +G     P   T
Sbjct: 33  DARHVFDELLRRGRGASIY---GLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHT 89

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C+ G++    A L  +   G   + IT+  +L+ +  + +   A+     ++
Sbjct: 90  YGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRM 149

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE---GCSPDIVTYNSLVNFSCKQ 305
            +  C P + + TIL++ +C +     A+E+L  MA +   G +PD+V+Y +++N   K+
Sbjct: 150 TELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVINGFFKE 209

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G  D A    + +L R + P+ +TY++++ +L      D   ++L  M +    P   TY
Sbjct: 210 GDSDKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTTMVKNGVMPNCMTY 269

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N +++G C       AI    +M S   +PD+VTYN+++  LCK G   EA ++   +  
Sbjct: 270 NSILHGYCSSEQPKEAIGFLKKMRSDGVEPDVVTYNSLMDYLCKNGRSTEARKIFDSMTK 329

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P + TY TL+ G A KG + +   L   M+ NGI PD      LI  + + ++V+E
Sbjct: 330 RGLEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDE 389

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+ +  ++ + G       Y  VI  LCKS  VD A+   E MI     P+  V+++++ 
Sbjct: 390 AMLVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIH 449

Query: 546 KV 547
            +
Sbjct: 450 SL 451



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 200/439 (45%), Gaps = 35/439 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T   +LQ + ++G L +   L+D+M R    PD H    LI    + +++++A 
Sbjct: 332 LEPDIATYCTLLQGYATKGALVEMHALLDLMVRNGIHPDHHVFNILICAYAKQEKVDEAM 391

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI---- 228
            V   M   G  P+ +TY  ++G LCK G +  A+   ++M   G  P++I Y ++    
Sbjct: 392 LVFSKMRQHGLNPNVVTYGAVIGILCKSGSVDDAMLYFEQMIDEGLTPNIIVYTSLIHSL 451

Query: 229 ----------------------LRTMFDN---------GKFKQAIGFWKDQLRKGCPPYL 257
                                 L T+F N         G+  ++   +   +R G  P +
Sbjct: 452 CIFDKWDKAEELILEMLDRGICLNTIFFNSIIHSHCKEGRVIESEKLFDLMVRIGVKPNV 511

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           ITY+ LI+  C    +  A ++L  M   G  PD VTYN+L+N  C+  + DDA+ +   
Sbjct: 512 ITYSTLIDGYCLAGKMDEATKLLSSMFSVGMKPDCVTYNTLINGYCRVSRMDDALALFKE 571

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           ++S G+ PN ITYN +L  L       A  ++   + ++     + TYNI+++GLCK  L
Sbjct: 572 MVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVGITKSGTQLELSTYNIILHGLCKNNL 631

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            D A+  F  +   + Q +  T+N ++GAL K G  +EA  L    + +   P   TY  
Sbjct: 632 TDEALRMFQNLCLTDLQLETRTFNIMIGALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRL 691

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           + + +  +G +E+   L+  M +NG + D      ++    +  ++  A   L  I ++ 
Sbjct: 692 MAENIIGQGLLEELDQLFFSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKH 751

Query: 498 NKMRNSAYRLVIHGLCKSK 516
             +  S   L I  L   K
Sbjct: 752 FSLEASTASLFIDLLSGGK 770



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 29/144 (20%), Positives = 70/144 (48%), Gaps = 4/144 (2%)

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P + TY  LI    + G ++      G +++ G   + IT   L+ G C   +  +A+D
Sbjct: 84  TPTVHTYGILIGCCCRAGRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMD 143

Query: 489 L-LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR---YKPDDTVFSTIV 544
           + L+ + +        +  +++ GLC   +   A+++L +M   R     PD   ++T++
Sbjct: 144 IVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELLHMMADDRGGGSAPDVVSYTTVI 203

Query: 545 KKVADDGMTEEAYKLWQKLIEWKV 568
                +G +++AY  + ++++ ++
Sbjct: 204 NGFFKEGDSDKAYSTYHEMLDRRI 227


>gi|255556466|ref|XP_002519267.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541582|gb|EEF43131.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 665

 Score =  218 bits (554), Expect = 9e-54,   Method: Compositional matrix adjust.
 Identities = 127/444 (28%), Positives = 222/444 (50%), Gaps = 30/444 (6%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P      +L+  ++  +R +    +   M   G  P+  TYN+++  LCK  ++  A  L
Sbjct: 147 PTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKNNRVDGACKL 206

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI------------------GFWKD---- 247
           L EMS  GCEPDV++Y T++ +M   GK ++A                   GF ++    
Sbjct: 207 LVEMSNKGCEPDVVSYTTVISSMSKLGKVEEARELSIRFQPNVSVYNALINGFCREYKVK 266

Query: 248 --------QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
                    + KG  P +ITY+ +I  +     +  A+ V   M + GCSP++ T+ SL+
Sbjct: 267 EVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLM 326

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
                +G+  +A+ + N +   G EPN + YNTL+H L S G       +   M     S
Sbjct: 327 KGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCS 386

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P V TY  LI+G  K G +  A   +N+M++  C P++V Y +++  LC+  M ++A  L
Sbjct: 387 PNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSL 446

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           +  ++  +C P  +T+NT I GL   G +E A+ L+ QM + G SP+  T+  ++ G  +
Sbjct: 447 IEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLK 506

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
            ++++EA++L+ E+ ++G ++    Y  +  G C   K + A+++L  M+    KPD   
Sbjct: 507 ENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAIT 566

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           ++T+       G  + A +L  KL
Sbjct: 567 YNTLTYAYCMQGKVKTAIQLLDKL 590



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 125/418 (29%), Positives = 214/418 (51%), Gaps = 6/418 (1%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  +   ++ +    GK+ +A +L    + R Q P+      LI G  R  ++++   
Sbjct: 216 EPDVVSYTTVISSMSKLGKVEEAREL----SIRFQ-PNVSVYNALINGFCREYKVKEVFL 270

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L  MV  G  P+ ITY+ ++  L   G +  A+A+  +M V GC P+V T+ ++++  F
Sbjct: 271 LLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYF 330

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+  +A+  W     +G  P ++ Y  LI  +C    +  A+ V   M   GCSP++ 
Sbjct: 331 MRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVS 390

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +L++   K G    A  + N +++ G  PN + Y ++++ L     +     +++ M
Sbjct: 391 TYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKM 450

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +  +  P   T+N  I GLC  G V+ AIN F QM    C P+I TYN VL  L KE  +
Sbjct: 451 STDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRI 510

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EAL+L+  +        L+TYNT+  G    G  E+A+ L G+M+  G+ PD IT+ TL
Sbjct: 511 KEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTL 570

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            + +C   +V+ A+ LL ++   G  +   +AY  ++ G+C    V+ A+  L+ M++
Sbjct: 571 TYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLN 628



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 109/410 (26%), Positives = 201/410 (49%), Gaps = 5/410 (1%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           IN+I    R+   E+A K+   +   G  P    YN ++  +    + +    +   M  
Sbjct: 118 INVINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKR 177

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G EP+V TYN +L+ +  N +   A     +   KGC P +++YT +I  + K   +  
Sbjct: 178 DGKEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEE 237

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A E+          P++  YN+L+N  C++ K  +  L++  ++ +G++PN ITY+T++ 
Sbjct: 238 ARELSIRF-----QPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVIS 292

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           SL   G  +    +   M     SP V+T+  L+ G    G V  A+N +N+M  +  +P
Sbjct: 293 SLSGIGNVELALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEP 352

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           ++V YNT++  LC  G + EA+ +   +  + CSP + TY  LIDG AK G +  A  ++
Sbjct: 353 NVVAYNTLIHGLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIW 412

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +MM NG  P+ + + +++   CR+    +A  L++++           +   I GLC S
Sbjct: 413 NKMMTNGCIPNVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCS 472

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +V+ AI +   M      P+   ++ ++  +  +   +EA +L  ++ E
Sbjct: 473 GRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEMEE 522



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 179/366 (48%), Gaps = 5/366 (1%)

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G    A+ +   +   GC+P V  YN +L  M    +F+     + +  R G  P + TY
Sbjct: 128 GLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTY 187

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            IL++ +CK   +  A ++L +M+ +GC PD+V+Y ++++   K GK ++A       LS
Sbjct: 188 NILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEA-----RELS 242

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
              +PN   YN L++          V  +L  M E    P V TY+ +I+ L   G V+ 
Sbjct: 243 IRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVEL 302

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+  + +M  + C P++ T+ +++      G + EAL + + +      P ++ YNTLI 
Sbjct: 303 ALAVWAKMFVRGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIH 362

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL   G M +A+ +  +M  NG SP+  T+  LI GF +A  +  A ++  ++   G   
Sbjct: 363 GLCSHGKMGEAVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIP 422

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  +++ LC+S     A  ++E M +    P+   F+T +K +   G  E A  L+
Sbjct: 423 NVVVYTSMVNVLCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLF 482

Query: 561 QKLIEW 566
            ++ ++
Sbjct: 483 CQMEQY 488



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 183/378 (48%), Gaps = 9/378 (2%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDNGKFKQAIGFW 245
           +TY +M+  L +   +     LL +M + G  C  D+  +  ++ T    G  +QA+  +
Sbjct: 80  LTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDL--FINVINTYRRVGLAEQALKMF 137

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
                 GC P +  Y  L++ +  +        +  +M  +G  P++ TYN L+   CK 
Sbjct: 138 YRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILLKALCKN 197

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
            + D A  ++  + ++G EP+ ++Y T++ S+   G  +   ++          P V  Y
Sbjct: 198 NRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL-----SIRFQPNVSVY 252

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N LING C+   V        QMV K   P+++TY+TV+ +L   G +  AL +   +  
Sbjct: 253 NALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAVWAKMFV 312

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
             CSP + T+ +L+ G   +G + +A+ ++ +M E G  P+ + + TLI G C   ++ E
Sbjct: 313 RGCSPNVYTFTSLMKGYFMRGRVLEALNIWNRMAEEGFEPNVVAYNTLIHGLCSHGKMGE 372

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           AV +  ++ + G     S Y  +I G  K+  +  A ++   M+++   P+  V++++V 
Sbjct: 373 AVSVSSKMERNGCSPNVSTYGALIDGFAKAGDLVGASEIWNKMMTNGCIPNVVVYTSMVN 432

Query: 546 KVADDGMTEEAYKLWQKL 563
            +    M  +A+ L +K+
Sbjct: 433 VLCRSSMFSQAWSLIEKM 450



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 114/229 (49%), Gaps = 5/229 (2%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C     + A  LI+ M+  N  P+       I+GL    R+E A  +   M   G  P+
Sbjct: 434 LCRSSMFSQAWSLIEKMSTDNCPPNTVTFNTFIKGLCCSGRVECAINLFCQMEQYGCSPN 493

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TYN ++ GL K  +I+ A+ L+ EM   G E +++TYNTI     + GKF++A+    
Sbjct: 494 IKTYNEVLDGLLKENRIKEALELVTEMEEKGMELNLVTYNTIFGGFCNVGKFEEALKLLG 553

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQ 305
             L  G  P  ITY  L    C Q  +  AI++LD ++  G   P++  Y SL+   C Q
Sbjct: 554 KMLVGGVKPDAITYNTLTYAYCMQGKVKTAIQLLDKLSAGGKWVPEVAAYTSLLWGICNQ 613

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNT----LLHSLGSRGCWDAVDKIL 350
              ++AVL ++ +L+ G+  N+ T+N     L +SLG  G    +D IL
Sbjct: 614 IGVEEAVLYLDKMLNEGICLNAATWNALVRGLFNSLGHLGPIHILDDIL 662



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/206 (30%), Positives = 103/206 (50%), Gaps = 3/206 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  ++  C  G++  A  L   M +    P+      ++ GL++ +RI++A +++  M
Sbjct: 461 TFNTFIKGLCCSGRVECAINLFCQMEQYGCSPNIKTYNEVLDGLLKENRIKEALELVTEM 520

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G   + +TYN + GG C  G+   A+ LL +M V G +PD ITYNT+       GK 
Sbjct: 521 EEKGMELNLVTYNTIFGGFCNVGKFEEALKLLGKMLVGGVKPDAITYNTLTYAYCMQGKV 580

Query: 239 KQAIGFWKDQLRKGCP--PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K AI    D+L  G    P +  YT L+  +C Q G+  A+  LD M  EG   +  T+N
Sbjct: 581 KTAIQLL-DKLSAGGKWVPEVAAYTSLLWGICNQIGVEEAVLYLDKMLNEGICLNAATWN 639

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRG 322
           +LV        +   + +++++L+ G
Sbjct: 640 ALVRGLFNSLGHLGPIHILDDILTSG 665



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 63/245 (25%), Positives = 109/245 (44%), Gaps = 5/245 (2%)

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           S+  +   +TY  ++  LG     D V  +L  M     S +   +  +IN   + GL +
Sbjct: 72  SKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDLFINVINTYRRVGLAE 131

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +A+  F ++    CQP +  YN +L A+  E        +   +      P + TYN L+
Sbjct: 132 QALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDGKEPNVYTYNILL 191

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
             L K   ++ A  L  +M   G  PD +++ T+I    +  +VEEA +L   I  + N 
Sbjct: 192 KALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAREL--SIRFQPNV 249

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
              S Y  +I+G C+  KV     +L  M+     P+   +ST++  ++  G  E A  +
Sbjct: 250 ---SVYNALINGFCREYKVKEVFLLLGQMVEKGIDPNVITYSTVISSLSGIGNVELALAV 306

Query: 560 WQKLI 564
           W K+ 
Sbjct: 307 WAKMF 311



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/223 (23%), Positives = 104/223 (46%), Gaps = 9/223 (4%)

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK--NCQPDIVTYNT 402
           A +    I N  +   T  TY I+I  L +   VD       QM  +  +C  D+  +  
Sbjct: 62  ASNYFRSIANSKAFQHTQLTYQIMIEKLGRECDVDGVQYLLQQMKLEGISCSEDL--FIN 119

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           V+    + G+  +AL++ + +    C P +  YN L+D +  +   +    +Y  M  +G
Sbjct: 120 VINTYRRVGLAEQALKMFYRIREFGCQPTVKIYNHLLDAMLSENRFQMIEPIYSNMKRDG 179

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             P+  T+  L+   C+ ++V+ A  LL E+  +G +    +Y  VI  + K  KV+ A 
Sbjct: 180 KEPNVYTYNILLKALCKNNRVDGACKLLVEMSNKGCEPDVVSYTTVISSMSKLGKVEEAR 239

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +     +S R++P+ +V++ ++     +   +E + L  +++E
Sbjct: 240 E-----LSIRFQPNVSVYNALINGFCREYKVKEVFLLLGQMVE 277


>gi|356529513|ref|XP_003533335.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62670,
           mitochondrial-like [Glycine max]
          Length = 794

 Score =  218 bits (554), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 131/452 (28%), Positives = 237/452 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  FC  G++T    ++  + +R   P       LI+GL    +++KA 
Sbjct: 338 IQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKAL 397

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                ++  G   + ++Y  ++ G+CK G  R AI LL ++     +P+V  Y+TI+  +
Sbjct: 398 HFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDAL 457

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                  +A G + +   KG    ++TY+ LI   C    +  AI +L++M ++  +PD+
Sbjct: 458 CKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDV 517

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY  LV+   K+GK  +A  V+  +L   ++P+  TYNTL++             + + 
Sbjct: 518 RTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNA 577

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+    +P V TY ILING CK  +VD A+N F +M  KN  PD VTY++++  LCK G 
Sbjct: 578 MSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGR 637

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++    L+  +        +ITYN+LIDGL K G ++KA+ L+ +M + GI P+  T   
Sbjct: 638 ISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTI 697

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++++A ++ +++  +G  +    Y ++I+G CK   ++ A+ +L  M  + 
Sbjct: 698 LLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENG 757

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+   F  I+  +      ++A KL +++I
Sbjct: 758 CIPNAVTFDIIINALFKKDENDKAEKLLRQMI 789



 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/445 (28%), Positives = 215/445 (48%), Gaps = 1/445 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK+ +A  ++ +M +     +      L+ G   +  ++KA  V   M
Sbjct: 205 TYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAM 264

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G  PD  +YN+M+ G CK  ++  A+ L  EM +S   P +I +N IL +      +
Sbjct: 265 SLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHY 323

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+        KG  P L T  ILI   C    I     VL  +   G  P  VT N+L
Sbjct: 324 STAVSLSHRLELKGIQPDLFTLNILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTL 383

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C +G+   A+   + LL++G + N ++Y TL++ +   G      K+L  ++    
Sbjct: 384 IKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYATLINGVCKIGDTRGAIKLLRKIDGRLT 443

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V  Y+ +I+ LCKY LV  A   F++M  K    D+VTY+T++   C  G L EA+ 
Sbjct: 444 KPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKLKEAIG 503

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL+ +   + +P + TY  L+D L K+G +++A  +   M++  + PD  T+ TL+ G+ 
Sbjct: 504 LLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTLMNGYL 563

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              +V++A  +   +   G       Y ++I+G CKSK VD A+ + + M      PD  
Sbjct: 564 LVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNMVPDTV 623

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            +S++V  +   G     + L  ++
Sbjct: 624 TYSSLVDGLCKSGRISYVWDLIDEM 648



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 110/375 (29%), Positives = 189/375 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G    A KL+  +  R   P+      +I  L +   + +A  +   M + G
Sbjct: 418 LINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKG 477

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              D +TY+ ++ G C  G+++ AI LL+EM +    PDV TY  ++  +   GK K+A 
Sbjct: 478 ISADVVTYSTLIYGFCIVGKLKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAK 537

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 L+    P + TY  L+        + +A  V + M++ G +PD+ TY  L+N  
Sbjct: 538 SVLAVMLKACVKPDVFTYNTLMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGF 597

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK    D+A+ +   +  + M P+++TY++L+  L   G    V  ++D M +      V
Sbjct: 598 CKSKMVDEALNLFKEMHQKNMVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADV 657

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN LI+GLCK G +D+AI  FN+M  +  +P+  T+  +L  LCK G L +A ++   
Sbjct: 658 ITYNSLIDGLCKNGHLDKAIALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQD 717

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L        +  YN +I G  K+G +E+A+ +  +M ENG  P+ +T   +I    + D+
Sbjct: 718 LLTKGYHLDVYIYNVMIYGHCKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDE 777

Query: 483 VEEAVDLLKEIGKRG 497
            ++A  LL+++  RG
Sbjct: 778 NDKAEKLLRQMIARG 792



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 116/419 (27%), Positives = 210/419 (50%), Gaps = 1/419 (0%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
           +R   PD      LI+GL    ++++A      ++  G   + ++Y  ++ G+C+ G  R
Sbjct: 56  KRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLINGVCRIGDTR 115

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           +AI  L ++     +P+V  YNTI+  +       +A G + +   KG    ++TY+ LI
Sbjct: 116 AAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISANVVTYSTLI 175

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
              C    +  A+ +L+ M ++  +P++ TYN LV+  CK+GK  +A  V+  +L   ++
Sbjct: 176 YGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVLAVMLKACVK 235

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            N ITY+TL+              + + M+    +P V +YNI+ING CK   VD+A+N 
Sbjct: 236 SNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKIKRVDKALNL 295

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F +M+     P I+ +N +L +  K    + A+ L H L      P L T N LI+    
Sbjct: 296 FKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTLNILINCFCH 354

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G +     +  ++++ G  P  +T  TLI G C   QV++A+    ++  +G ++   +
Sbjct: 355 MGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVS 414

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           Y  +I+G+CK      AI++L  +     KP+  ++STI+  +    +  EAY L+ ++
Sbjct: 415 YATLINGVCKIGDTRGAIKLLRKIDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEM 473



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 114/413 (27%), Positives = 206/413 (49%), Gaps = 2/413 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N +++  C +G++  A    D ++A+  Q+    +   LI G+ +I     A K+L+ 
Sbjct: 379 TLNTLIKGLCLKGQVKKALHFHDKLLAQGFQLNQVSYA-TLINGVCKIGDTRGAIKLLRK 437

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +      P+   Y+ ++  LCK   +  A  L  EM+V G   DV+TY+T++      GK
Sbjct: 438 IDGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGK 497

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            K+AIG   + + K   P + TYTIL++ + K+  +  A  VL  M      PD+ TYN+
Sbjct: 498 LKEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNT 557

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N      +   A  V N +   G+ P+  TY  L++        D    +   M++ +
Sbjct: 558 LMNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKN 617

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TY+ L++GLCK G +    +  ++M  +    D++TYN+++  LCK G L++A+
Sbjct: 618 MVPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAI 677

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            L + +      P   T+  L+DGL K G ++ A  ++  ++  G   D   +  +I+G 
Sbjct: 678 ALFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGH 737

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           C+   +EEA+ +L ++ + G       + ++I+ L K  + D A ++L  MI+
Sbjct: 738 CKQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIA 790



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 178/355 (50%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG   + + +  + I+   C    +++A  L   M  +    D      LI G   + ++
Sbjct: 439 DGRLTKPNVEMYSTIIDALCKYQLVSEAYGLFSEMTVKGISADVVTYSTLIYGFCIVGKL 498

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           ++A  +L  MV+    PD  TY ++V  L K G+++ A ++L  M  +  +PDV TYNT+
Sbjct: 499 KEAIGLLNEMVLKTINPDVRTYTILVDALGKEGKVKEAKSVLAVMLKACVKPDVFTYNTL 558

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +       + K+A   +      G  P + TYTILI   CK   +  A+ +  +M  +  
Sbjct: 559 MNGYLLVYEVKKAQHVFNAMSLMGVTPDVHTYTILINGFCKSKMVDEALNLFKEMHQKNM 618

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD VTY+SLV+  CK G+      +I+ +  RG   + ITYN+L+  L   G  D    
Sbjct: 619 VPDTVTYSSLVDGLCKSGRISYVWDLIDEMRDRGQPADVITYNSLIDGLCKNGHLDKAIA 678

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + + M +    P  FT+ IL++GLCK G +  A   F  +++K    D+  YN ++   C
Sbjct: 679 LFNKMKDQGIRPNTFTFTILLDGLCKGGRLKDAQEVFQDLLTKGYHLDVYIYNVMIYGHC 738

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           K+G+L EAL +L  +  + C P  +T++ +I+ L KK   +KA  L  QM+  G+
Sbjct: 739 KQGLLEEALTMLSKMEENGCIPNAVTFDIIINALFKKDENDKAEKLLRQMIARGL 793



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/282 (30%), Positives = 153/282 (54%), Gaps = 6/282 (2%)

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
           PP+ +  +I      +    A ++ VL  +   G  PD VT N+L+   C +G+  +A+ 
Sbjct: 31  PPFFLPPSI------QNVDDAVSLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALH 84

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
             + LL++G + N ++Y TL++ +   G   A  K L  ++     P V  YN +I+ LC
Sbjct: 85  FHDKLLAQGFQLNQVSYATLINGVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALC 144

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           KY LV  A   F++M  K    ++VTY+T++   C  G L EAL LL+++   + +P + 
Sbjct: 145 KYQLVSEAYGLFSEMTVKGISANVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVC 204

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TYN L+D L K+G +++A  +   M++  +  + IT+ TL+ G+    +V++A  +   +
Sbjct: 205 TYNILVDALCKEGKVKEAKSVLAVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAM 264

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
              G      +Y ++I+G CK K+VD A+ + + MI SR+ P
Sbjct: 265 SLMGVTPDVHSYNIMINGFCKIKRVDKALNLFKEMILSRFPP 306



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 99/393 (25%), Positives = 178/393 (45%), Gaps = 36/393 (9%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           ++++L ++   G  PD +T NT+++ +   G+ K+A+ F    L +G     ++Y  LI 
Sbjct: 47  SLSVLTKILKRGYPPDTVTLNTLIKGLCLKGQVKEALHFHDKLLAQGFQLNQVSYATLIN 106

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            VC+      AI+ L  +      P++  YN++++  CK     +A  + + +  +G+  
Sbjct: 107 GVCRIGDTRAAIKFLRKIDGRLAKPNVEMYNTIIDALCKYQLVSEAYGLFSEMTVKGISA 166

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL-------- 377
           N +TY+TL++     G       +L++M   + +P V TYNIL++ LCK G         
Sbjct: 167 NVVTYSTLIYGFCIVGKLKEALGLLNVMVLKTINPNVCTYNILVDALCKEGKVKEAKSVL 226

Query: 378 ---------------------------VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
                                      V +A + FN M      PD+ +YN ++   CK 
Sbjct: 227 AVMLKACVKSNVITYSTLMDGYFLVYEVKKAQHVFNAMSLMGVTPDVHSYNIMINGFCKI 286

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             +++AL L   +  S   P +I +N ++D  AK      A+ L  ++   GI PD  T 
Sbjct: 287 KRVDKALNLFKEMILSRFPP-IIQFNKILDSFAKMKHYSTAVSLSHRLELKGIQPDLFTL 345

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             LI  FC   Q+     +L +I KRG          +I GLC   +V  A+   + +++
Sbjct: 346 NILINCFCHMGQITFGFSVLAKILKRGYPPSTVTLNTLIKGLCLKGQVKKALHFHDKLLA 405

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             ++ +   ++T++  V   G T  A KL +K+
Sbjct: 406 QGFQLNQVSYATLINGVCKIGDTRGAIKLLRKI 438


>gi|414864980|tpg|DAA43537.1| TPA: hypothetical protein ZEAMMB73_764503 [Zea mays]
          Length = 649

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 119/450 (26%), Positives = 234/450 (52%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T+N ++      G +  A  L+D MA R   P      ++++GL +  R +KA +V 
Sbjct: 191 DVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVF 250

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      PD  ++N+++GG C+ G+++ A+    EM      PDV++++ ++      
Sbjct: 251 RTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRR 310

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   A  + ++    G  P  + YT++I   C+   ++ A+ V D+M   GC PD+VTY
Sbjct: 311 GEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTY 370

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  CKQ +  DA  ++N +  RG+ P+  T+ TL+H    +G ++   ++ D +  
Sbjct: 371 NTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLR 430

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V TYN LI+G+C+ G + +A   ++ M ++   P+ +TY+ ++ + C++G + +
Sbjct: 431 QRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVED 490

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A   L  +      P + TYN++I G  + G ++K      +M ++ + PD IT  TLI 
Sbjct: 491 AFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIH 550

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+ + + +  A ++   + K   +     Y ++I+G  +   +  A +V + M  S  +P
Sbjct: 551 GYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEP 610

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   + +++      G +++A++L  ++I 
Sbjct: 611 DRYTYMSLINGHVTAGNSKQAFQLHDEMIH 640



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 120/385 (31%), Positives = 199/385 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D ++ N ++  FC  G++ +A K    M  R   PD      LI    R   ++ A 
Sbjct: 258 VAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAG 317

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             L+ M   G VPD + Y M++GG C+ G +  A+ + DEM   GC PDV+TYNT+L  +
Sbjct: 318 AYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGL 377

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +   A     +   +G  P L T+T LI   C+Q     A+++ D +  +   PD+
Sbjct: 378 CKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDV 437

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYNSL++  C++G    A  + +++ +R + PN ITY+ L+ S   +G  +     LD 
Sbjct: 438 VTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDE 497

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +  + P + TYN +I G C+ G V +      +M   N  PD++T+NT++    KE  
Sbjct: 498 MVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEEN 557

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ A  + +++      P  +TYN +I+G +++G M+ A  ++  M ++GI PD  T+ +
Sbjct: 558 MHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDSGIEPDRYTYMS 617

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           LI G   A   ++A  L  E+  RG
Sbjct: 618 LINGHVTAGNSKQAFQLHDEMIHRG 642



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 189/376 (50%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           PD +T+N+++    + G + +AIAL+D M+  G +P ++TYN++L+ +  + +F +A   
Sbjct: 190 PDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEV 249

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           ++   +    P + ++ ILI   C+   +  A++   +M     +PD+V+++ L+    +
Sbjct: 250 FRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSR 309

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           +G+ D A   +  +   G+ P+ + Y  ++      G      ++ D M      P V T
Sbjct: 310 RGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVT 369

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN L+NGLCK   +  A    N+M  +   PD+ T+ T++   C++G    ALQL   L 
Sbjct: 370 YNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLL 429

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P ++TYN+LIDG+ +KG + KA  L+  M    I P+ IT+  LI   C   QVE
Sbjct: 430 RQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVE 489

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +A   L E+ K+GN      Y  +I G C+S  V    Q L+ M      PD   F+T++
Sbjct: 490 DAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLI 549

Query: 545 KKVADDGMTEEAYKLW 560
                +     A+ ++
Sbjct: 550 HGYIKEENMHGAFNVF 565



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 226/450 (50%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T N ++ ++C   +   A  +I  M +R   PD      LI    R   ++ A  
Sbjct: 154 EVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIA 213

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  M   G  P  +TYN ++ GLCK  +   A  +   M      PDV ++N ++    
Sbjct: 214 LVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFC 273

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+ K+A+ F+K+   +   P +++++ LI    ++  +  A   L +M   G  PD V
Sbjct: 274 RVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGV 333

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y  ++   C+ G   +A+ V + ++  G  P+ +TYNTLL+ L  +      +K+L+ M
Sbjct: 334 IYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQHRLLDAEKLLNEM 393

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E   +P + T+  LI+G C+ G  + A+  F+ ++ +  +PD+VTYN+++  +C++G L
Sbjct: 394 EERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTYNSLIDGMCRKGDL 453

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +A +L   ++     P  ITY+ LID   +KG +E A     +M++ G  P+  T+ ++
Sbjct: 454 AKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVKKGNLPNIRTYNSI 513

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G+CR+  V++    L+++ +         +  +IHG  K + +  A  V  +M     
Sbjct: 514 IKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFNTLIHGYIKEENMHGAFNVFNIMEKEMV 573

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +PD   ++ I+   ++ G  ++A ++++ +
Sbjct: 574 RPDAVTYNMIINGFSEQGNMQDAGRVFKGM 603



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 195/399 (48%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A +  ++++ S    +  T N+MV   CK  +   A  ++ EM      PDV+T+N ++ 
Sbjct: 141 AQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGADTVISEMEKRCVFPDVVTHNVLID 200

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
             F  G    AI        +G  P ++TY  +++ +CK     +A EV   M     +P
Sbjct: 201 ARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGLCKHRRFDKAKEVFRTMDQCSVAP 260

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+ ++N L+   C+ G+  +AV     +  R + P+ ++++ L+     RG  D     L
Sbjct: 261 DVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDVVSFSCLIGLFSRRGEMDHAGAYL 320

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M      P    Y ++I G C+ G +  A+   ++MV   C PD+VTYNT+L  LCK+
Sbjct: 321 REMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPDVVTYNTLLNGLCKQ 380

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             L +A +LL+ +     +P L T+ TLI G  ++G  E A+ L+  ++   + PD +T+
Sbjct: 381 HRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFDTLLRQRLRPDVVTY 440

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +LI G CR   + +A +L  ++  R     +  Y ++I   C+  +V+ A   L+ M+ 
Sbjct: 441 NSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKGQVEDAFGFLDEMVK 500

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
               P+   +++I+K     G  ++  +  QK+ +  VF
Sbjct: 501 KGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVF 539



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 103/341 (30%), Positives = 179/341 (52%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           F  RG++  A   +  M     +PD      +I G  R   + +A +V   MV  G +PD
Sbjct: 307 FSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDEMVGFGCLPD 366

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            +TYN ++ GLCK+ ++  A  LL+EM   G  PD+ T+ T++      G F+ A+  + 
Sbjct: 367 VVTYNTLLNGLCKQHRLLDAEKLLNEMEERGVTPDLCTFTTLIHGYCRQGNFENALQLFD 426

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             LR+   P ++TY  LI+ +C++  +A+A E+ DDM      P+ +TY+ L++  C++G
Sbjct: 427 TLLRQRLRPDVVTYNSLIDGMCRKGDLAKANELWDDMHAREILPNHITYSILIDSHCEKG 486

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           + +DA   ++ ++ +G  PN  TYN+++      G      + L  M + +  P + T+N
Sbjct: 487 QVEDAFGFLDEMVKKGNLPNIRTYNSIIKGYCRSGNVKKGQQFLQKMRQDNVFPDLITFN 546

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI+G  K   +  A N FN M  +  +PD VTYN ++    ++G + +A ++   +  S
Sbjct: 547 TLIHGYIKEENMHGAFNVFNIMEKEMVRPDAVTYNMIINGFSEQGNMQDAGRVFKGMGDS 606

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
              P   TY +LI+G    G  ++A  L+ +M+  G +PDD
Sbjct: 607 GIEPDRYTYMSLINGHVTAGNSKQAFQLHDEMIHRGFAPDD 647



 Score = 95.5 bits (236), Expect = 7e-17,   Method: Compositional matrix adjust.
 Identities = 67/304 (22%), Positives = 137/304 (45%), Gaps = 1/304 (0%)

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L+ ++ ++ G +R  E++  +     +P    ++ L+    +  K  +A      LL   
Sbjct: 59  LLLRMSRRRGASRR-EIVSSLLASSPTPQPQVFDLLIRTYTQSRKPREAFEAFRLLLDHR 117

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +   +   N LL  L   G      +   ++  +      +T NI+++  CK    D A 
Sbjct: 118 VPVPASASNALLAVLSRAGWPHLAQEAYRLVLSSDSEVNAYTLNIMVHSYCKTLEFDGAD 177

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
              ++M  +   PD+VT+N ++ A  + G ++ A+ L+  +      P ++TYN+++ GL
Sbjct: 178 TVISEMEKRCVFPDVVTHNVLIDARFRAGDVDAAIALVDSMANRGLKPGIVTYNSVLKGL 237

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K    +KA  ++  M +  ++PD  +   LI GFCR  +V+EAV   KE+  R      
Sbjct: 238 CKHRRFDKAKEVFRTMDQCSVAPDVRSFNILIGGFCRVGEVKEAVKFYKEMQHRYVTPDV 297

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            ++  +I    +  ++D A   L  M      PD  +++ ++      G   EA ++  +
Sbjct: 298 VSFSCLIGLFSRRGEMDHAGAYLREMKGLGLVPDGVIYTMVIGGFCRAGSMSEALRVRDE 357

Query: 563 LIEW 566
           ++ +
Sbjct: 358 MVGF 361


>gi|449469290|ref|XP_004152354.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
 gi|449484425|ref|XP_004156880.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Cucumis sativus]
          Length = 834

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 126/490 (25%), Positives = 235/490 (47%), Gaps = 35/490 (7%)

Query: 90  KLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI 149
           K R +    + +D  +   +G  +  D  T + +++  C +G++ D  KLI+    +  +
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRS---- 205
           P+  F   LI G  +   +E A K+ + + M G +P   T+  +V G CK G   +    
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 206 -------------------------------AIALLDEMSVSGCEPDVITYNTILRTMFD 234
                                          A   L EMS + CEPD++TYNT++     
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+ ++A    +  +R+G  P  +TYT L+   CKQ    +A + L +M+  G   D+++
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMIS 420

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +L++     G+ D A+ + + +++RG+ P++  YN L++ L  +G       +L  M 
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEML 480

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           + + +P  F Y  L++G  ++G +D A   F  ++ K   P +V YN ++    K GM++
Sbjct: 481 DQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMD 540

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A+  +  +  +   P + T++T+IDG  K+  M   + ++G M++    P+ +T+ +LI
Sbjct: 541 NAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQNCKPNVVTYTSLI 600

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+CR  + + A  L   +   G K     Y ++I   CK  K+  A+   ELM+ ++  
Sbjct: 601 NGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAVSYFELMLINKCT 660

Query: 535 PDDTVFSTIV 544
           P+D  F  +V
Sbjct: 661 PNDAAFHYLV 670



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 110/426 (25%), Positives = 207/426 (48%), Gaps = 26/426 (6%)

Query: 153 HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
           HFC    RG      +E+A K+L+  +  G  P+ +TY  +V G CK+G+   A   L E
Sbjct: 357 HFCS---RG-----EVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIE 408

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           MS SG E D+I+Y  ++  +   G+   A+      + +G  P    Y +L+  + K+  
Sbjct: 409 MSTSGLEVDMISYGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGK 468

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           ++ A  +L +M  +  +PD   Y +LV+   + G  D+A  +   ++ +G++P  + YN 
Sbjct: 469 LSMAKVMLTEMLDQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNV 528

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           ++      G  D     +D M  A H P +FT++ +I+G  K   ++  +  F  MV +N
Sbjct: 529 MIKGFSKSGMMDNAILCIDKMRRAHHVPDIFTFSTIIDGYVKQHNMNAVLKIFGLMVKQN 588

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C+P++VTY +++   C++G    A +L  ++      P ++TY+ LI    K+  + KA+
Sbjct: 589 CKPNVVTYTSLINGYCRKGETKMAEKLFSMMRSHGLKPSVVTYSILIGSFCKEAKLGKAV 648

Query: 453 VLYGQMMENGISPDDITHRTLIWGF--CRADQV--------EEAVDLLKEIGKR----GN 498
             +  M+ N  +P+D     L+ GF   +A  V        E +  + ++   R    G 
Sbjct: 649 SYFELMLINKCTPNDAAFHYLVNGFTNTKATAVSREPNNLHENSRSMFEDFFSRMIGDGW 708

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
             + +AY  ++  LC+ + V  A+Q+   M++     D   F  ++  +  +G ++E   
Sbjct: 709 TQKAAAYNCILICLCQQRMVKTALQLRNKMLAFGLCSDAVSFVALIHGICLEGNSKE--- 765

Query: 559 LWQKLI 564
            W+ +I
Sbjct: 766 -WRNMI 770



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 206/445 (46%), Gaps = 40/445 (8%)

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ-IMVMSGGVPDTITYNMMVGGLC 198
           ++ M  +  IP      +++     +  ++KA +V   ++ +   +P T   N ++  L 
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 199 KRGQIRSAIALLDEMSVSGCEPDV----ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
           K  +I +A  L DEM       D+     T + +++ +   G+ +  I   + +  KGC 
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P ++ Y  LI+  CK+  +  A ++   + ++G  P + T+ SLVN  CK G ++   L+
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 315 INNLLSRGM-----------------------------------EPNSITYNTLLHSLGS 339
           +  +  RG+                                   EP+ +TYNTL++   S
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
           RG  +  +K+L+       +P   TY  L++G CK G   +A +   +M +   + D+++
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMIS 420

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  ++  L   G ++ AL +   +      P    YN L++GL KKG +  A V+  +M+
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEML 480

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           +  I+PD   + TL+ GF R   ++EA  L + I ++G       Y ++I G  KS  +D
Sbjct: 481 DQNIAPDAFVYATLVDGFIRHGNLDEAKKLFQLIIEKGLDPGVVGYNVMIKGFSKSGMMD 540

Query: 520 MAIQVLELMISSRYKPDDTVFSTIV 544
            AI  ++ M  + + PD   FSTI+
Sbjct: 541 NAILCIDKMRRAHHVPDIFTFSTII 565



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/364 (23%), Positives = 171/364 (46%), Gaps = 5/364 (1%)

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGCPPYLITYTILIEQVC 268
           L+EM      P     + +L    D G   +A+  +   ++     P       L+  + 
Sbjct: 121 LEEMKTKETIPTREALSDVLCAYADVGLVDKALEVYHGVVKLHNSLPSTYACNSLLNLLV 180

Query: 269 KQCGIARAIEVLDDMAIEGCSPDI----VTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           K   I  A ++ D+M       DI     T + +V   C +G+ +D + +I +   +G  
Sbjct: 181 KHRRIETAHQLYDEMIDRDNGDDICVDNYTTSIMVKGLCLKGRIEDGIKLIESRWGKGCV 240

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN + YNTL+     +G  ++  K+   +      PT+ T+  L+NG CK G+ +     
Sbjct: 241 PNIVFYNTLIDGYCKKGEVESAYKLFKKLKMKGFIPTLQTFGSLVNGFCKMGMFEAIDLL 300

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M  +    ++  YN ++ A  K G   +A   L  ++ + C P L+TYNTLI+    
Sbjct: 301 LLEMKDRGLSVNVQMYNNIIDARYKLGFDIKAKDTLKEMSENCCEPDLVTYNTLINHFCS 360

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           +G +E+A  L  Q +  G++P+ +T+  L+ G+C+  +  +A D L E+   G ++   +
Sbjct: 361 RGEVEEAEKLLEQTIRRGLAPNKLTYTPLVHGYCKQGEYTKATDYLIEMSTSGLEVDMIS 420

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +IHGL  + +VD A+ + + M++    PD  +++ ++  +   G    A  +  +++
Sbjct: 421 YGALIHGLVVAGEVDTALTIRDRMMNRGILPDANIYNVLMNGLFKKGKLSMAKVMLTEML 480

Query: 565 EWKV 568
           +  +
Sbjct: 481 DQNI 484


>gi|224138176|ref|XP_002326537.1| predicted protein [Populus trichocarpa]
 gi|222833859|gb|EEE72336.1| predicted protein [Populus trichocarpa]
          Length = 826

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 134/476 (28%), Positives = 230/476 (48%), Gaps = 35/476 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C   K+ +  KLI+    +  IP+  F   L+ G  +   +E+A+ + + + M G
Sbjct: 211 MVRGLCKERKVEEGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKG 270

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEM----------------------------- 213
            +P T TY +M+ GLCK+   ++   LL EM                             
Sbjct: 271 FLPTTETYGIMINGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVG 330

Query: 214 ------SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
                 + +GCEPD+ TYNT++     +GK  +A    +  +++G  P  ++YT LI   
Sbjct: 331 KTLRWITENGCEPDITTYNTLISGSCRDGKVHEAEELLEHAIKRGLSPNKLSYTPLIHVY 390

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CKQ    RA ++   M  +G   D+V Y +LV+     G+ D A+ V + ++ RG+ P++
Sbjct: 391 CKQGKCLRAFDLFIGMTEKGHPLDLVAYGALVHGLVAAGEVDVALTVRDKMVERGVLPDA 450

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
             YN L++ L  +G   A   +L  M   + S   F    L++G  ++G +D A   F  
Sbjct: 451 NVYNVLMNGLCKKGRLSAAKLLLVEMLHQNLSLDAFVSATLVDGFIRHGKLDEAKKLFEL 510

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
            ++K   P +V YN ++   CK GM+N+AL  +  +     SP   TY+T+IDG  K+  
Sbjct: 511 TIAKGMDPGVVGYNAMIKGYCKFGMMNDALTCVQRMKDGDHSPDEFTYSTIIDGYVKQND 570

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +  A+ L+GQM++    P+ +T+ +LI GFCR      A    +E+   G K     Y +
Sbjct: 571 LHNALKLFGQMVKQKCKPNVVTYTSLINGFCRTGDSSRAEKTFEEMRSSGLKPNVVTYTI 630

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +I   CK  K+  A    ELM+ +R  P+D  F+ ++  + ++  T  + K  + L
Sbjct: 631 LIGCFCKEGKISKACSFFELMLLNRCIPNDVTFNYLINGLTNNLATAVSNKANESL 686



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 64/272 (23%), Positives = 117/272 (43%), Gaps = 38/272 (13%)

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           ++LL  L     +  V+ +L+ M     +PT    + ++      GLV+RA+  ++    
Sbjct: 103 SSLLKLLARCRVFVEVENLLETMKCKDLAPTREALSFVVGAYVDSGLVNRALELYHIAYD 162

Query: 391 -KNCQPDIVTYNTVLGA-----------------------------------LCKEGMLN 414
             N  PD++  N +L A                                   LCKE  + 
Sbjct: 163 IHNYLPDVIACNALLNALIQQKKVEIARKVYEEMVKRDGCWDNYSVCIMVRGLCKERKVE 222

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           E  +L++   G  C P ++ YNTL+DG  K+G +E+A  L+ ++   G  P   T+  +I
Sbjct: 223 EGRKLINDRWGKGCIPNIVFYNTLVDGYWKRGDVERANGLFKELKMKGFLPTTETYGIMI 282

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK-KVDMAIQVLELMISSRY 533
            G C+    +    LL E+ +RG  +    Y  ++    K   K+++  + L  +  +  
Sbjct: 283 NGLCKKCNFKAVDGLLVEMKERGVDVNVQVYNSIVDAQIKHGCKIEVG-KTLRWITENGC 341

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +PD T ++T++     DG   EA +L +  I+
Sbjct: 342 EPDITTYNTLISGSCRDGKVHEAEELLEHAIK 373


>gi|8778650|gb|AAF79658.1|AC025416_32 F5O11.4 [Arabidopsis thaliana]
          Length = 975

 Score =  217 bits (553), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 226/439 (51%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           FC   KL  A   +  + +    P+      LI GL    R+ +A +++  MV  G  PD
Sbjct: 231 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 290

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            IT N +V GLC  G+   A+ L+D+M   GC+P+ +TY  +L  M  +G+   A+   +
Sbjct: 291 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 350

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
               +      + Y+I+I+ +CK   +  A  + ++M ++G + +I+TYN L+   C  G
Sbjct: 351 KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 410

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           ++DD   ++ +++ R + PN +T++ L+ S    G     +++   M     +P   TY 
Sbjct: 411 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 470

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI+G CK   +D+A    + MVSK C P+I T+N ++   CK   +++ L+L   ++  
Sbjct: 471 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 530

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
                 +TYNTLI G  + G +  A  L+ +M+   + P+ +T++ L+ G C   + E+A
Sbjct: 531 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 590

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           +++ ++I K   ++    Y ++IHG+C + KVD A  +   +     KP    ++ ++  
Sbjct: 591 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 650

Query: 547 VADDGMTEEAYKLWQKLIE 565
           +   G   EA  L++K+ E
Sbjct: 651 LCKKGPLSEAELLFRKMEE 669



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 221/445 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C  G++++A +L+D M      PD      L+ GL    +  +A  ++  M
Sbjct: 258 TFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKM 317

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+ +TY  ++  +CK GQ   A+ LL +M     + D + Y+ I+  +  +G  
Sbjct: 318 VEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSL 377

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   + +   KG    +ITY ILI   C         ++L DM     +P++VT++ L
Sbjct: 378 DNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVL 437

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK  +A  +   ++ RG+ P++ITY +L+         D  ++++D+M     
Sbjct: 438 IDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGC 497

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + T+NILING CK   +D  +  F +M  +    D VTYNT++   C+ G LN A +
Sbjct: 498 DPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKE 557

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P ++TY  L+DGL   G  EKA+ ++ ++ ++ +  D   +  +I G C
Sbjct: 558 LFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMC 617

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
            A +V++A DL   +  +G K     Y ++I GLCK   +  A  +   M    + PD  
Sbjct: 618 NASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGW 677

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++ +++    DG   ++ KL ++L
Sbjct: 678 TYNILIRAHLGDGDATKSVKLIEEL 702



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 220/411 (53%), Gaps = 1/411 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L  GL+ I + + A  + + M+ S  +P  I ++ +   + K  Q    +AL  +M + G
Sbjct: 158 LRSGLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKG 216

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              ++ T + ++       K   A       ++ G  P  IT++ LI  +C +  ++ A+
Sbjct: 217 IAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEAL 276

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E++D M   G  PD++T N+LVN  C  GK  +A+L+I+ ++  G +PN++TY  +L+ +
Sbjct: 277 ELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVM 336

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      ++L  M E +       Y+I+I+GLCK+G +D A N FN+M  K    +I
Sbjct: 337 CKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNI 396

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +TYN ++G  C  G  ++  +LL  +     +P ++T++ LID   K+G + +A  L+ +
Sbjct: 397 ITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKE 456

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+  GI+PD IT+ +LI GFC+ + +++A  ++  +  +G       + ++I+G CK+ +
Sbjct: 457 MIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANR 516

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +D  +++   M       D   ++T+++   + G    A +L+Q+++  KV
Sbjct: 517 IDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 567



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/399 (29%), Positives = 204/399 (51%), Gaps = 2/399 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   +L   C  G+   A +L+  M  RN ++    + I +I GL +   ++ A  +   
Sbjct: 328 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI-IIDGLCKHGSLDNAFNLFNE 386

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M M G   + ITYN+++GG C  G+      LL +M      P+V+T++ ++ +    GK
Sbjct: 387 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 446

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A    K+ + +G  P  ITYT LI+  CK+  + +A +++D M  +GC P+I T+N 
Sbjct: 447 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 506

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK  + DD + +   +  RG+  +++TYNTL+      G  +   ++   M    
Sbjct: 507 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 566

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P + TY IL++GLC  G  ++A+  F ++     + DI  YN ++  +C    +++A 
Sbjct: 567 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 626

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            L   L      P + TYN +I GL KKG + +A +L+ +M E+G +PD  T+  LI   
Sbjct: 627 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 686

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
                  ++V L++E+ + G  +  S  ++VI  L   K
Sbjct: 687 LGDGDATKSVKLIEELKRCGFSVDASTIKMVIDMLSDDK 725



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 215/432 (49%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           K  DA  L   M     +P       L   + +  + +    + + M + G   +  T +
Sbjct: 166 KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 225

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           +M+   C+  ++  A + + ++   G EP+ IT++T++  +   G+  +A+      +  
Sbjct: 226 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 285

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P LIT   L+  +C     A A+ ++D M   GC P+ VTY  ++N  CK G+   A
Sbjct: 286 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 345

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + ++  +  R ++ +++ Y+ ++  L   G  D    + + M     +  + TYNILI G
Sbjct: 346 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 405

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
            C  G  D        M+ +   P++VT++ ++ +  KEG L EA +L   +     +P 
Sbjct: 406 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 465

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
            ITY +LIDG  K+  ++KA  +   M+  G  P+  T   LI G+C+A+++++ ++L +
Sbjct: 466 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 525

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           ++  RG       Y  +I G C+  K+++A ++ + M+S +  P+   +  ++  + D+G
Sbjct: 526 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 585

Query: 552 MTEEAYKLWQKL 563
            +E+A ++++K+
Sbjct: 586 ESEKALEIFEKI 597



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 177/376 (47%), Gaps = 35/376 (9%)

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           ++Y   LR+   + K   AI  ++D +     P +I ++ L   + K       + +   
Sbjct: 152 LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 211

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M ++G + ++ T + ++N  C+  K   A   +  ++  G EPN+IT++TL++ L   G 
Sbjct: 212 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 271

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                +++D M E  H P + T N L+NGLC  G    A+   ++MV   CQP+ VTY  
Sbjct: 272 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 331

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           VL  +CK G    A++LL  +   +     + Y+ +IDGL K G ++ A  L+ +M   G
Sbjct: 332 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 391

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG------------------NKMRNS- 503
           I+ + IT+  LI GFC A + ++   LL+++ KR                    K+R + 
Sbjct: 392 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 451

Query: 504 ----------------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
                            Y  +I G CK   +D A Q+++LM+S    P+   F+ ++   
Sbjct: 452 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 511

Query: 548 ADDGMTEEAYKLWQKL 563
                 ++  +L++K+
Sbjct: 512 CKANRIDDGLELFRKM 527



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/289 (24%), Positives = 134/289 (46%), Gaps = 7/289 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T   ++  FC    L  A++++D+M  +   P+      LI G  + +RI+   
Sbjct: 462 IAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGL 521

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + M + G V DT+TYN ++ G C+ G++  A  L  EM      P+++TY  +L  +
Sbjct: 522 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGL 581

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            DNG+ ++A+  ++   +      +  Y I+I  +C    +  A ++   + ++G  P +
Sbjct: 582 CDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGV 641

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN ++   CK+G   +A L+   +   G  P+  TYN L+ +    G      K+++ 
Sbjct: 642 KTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEE 701

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
           +     S    T  ++I+ L      D   N F++    NC      +N
Sbjct: 702 LKRCGFSVDASTIKMVIDMLS-----DDKANYFSKY--HNCSKSTSFWN 743


>gi|50508175|dbj|BAD30981.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50508218|dbj|BAD31653.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 918

 Score =  217 bits (552), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 220/480 (45%), Gaps = 35/480 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G + DA  ++  +      PD     ++I G  R   ++ A +V   M  
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV------------------------- 215
            G  P+T+TY+ ++ GLC  G++  A  L+ EM +                         
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 216 ----------SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                      GCEP+V TY  ++  +  +G  K AIG +    R G  P  +TY  LI 
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            + +   I  A  VL+ M   GCSP+IVTYN ++   C  G    A+LV+NN+L RG   
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N +TYNT++      G   +  +ILD+M +    P  ++Y  LI G CK   ++ A   F
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           N+MV     P+ VTY  ++   CK+  L+ A  LL  +  S C P + TYN LI GL K+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
                A  L   M+E GI P+ +T+  +I G C+      A+++  ++ ++G       Y
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I  L +  KV+ A  +   +      PD+  +  +++     G  E A+    ++I+
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 208/437 (47%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T + ++   C  G++ +A  LI  M     +P  H C   I  L  +   E A +
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G  P+  TY  ++ GLC  G ++ AI L   MS  G  P+ +TYN ++  + 
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +N + K A        R GC P ++TY  +I+  C      +A+ V+++M   G S ++V
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+++   C  G    A+ +++ +   G +P+  +Y  L+         ++   + + M
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P   TY  LI+G CK   +D A +    M    C+P++ TYN ++  L K+   
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A +L  ++      P ++TY  +IDGL K G    A+ ++ +M+E G  P+ +T+ +L
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I    +  +VEEA +L  E+ + G       Y  +I     S KV+ A   L  MI +  
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 534 KPDDTVFSTIVKKVADD 550
           +P    +  ++K + ++
Sbjct: 702 QPTLWTYGVLIKGLKNE 718



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 217/441 (49%), Gaps = 18/441 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I++ +C  G  T A +++D+M      PD      LI G  +I ++E A  +   M
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+ +TY  ++ G CK  ++ +A +LL+ M  SGC P+V TYN ++  +     F
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    K  + +G  P ++TYT +I+ +CK    + A+E+ + M  +GC P+++TY+SL
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    ++GK ++A  +   L   G+ P+ ITY  ++ +    G  +     L  M +A  
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 359 SPTVFTYNILINGL-CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            PT++TY +LI GL  +Y L D+ + +   +V  NC     T +       ++ +   + 
Sbjct: 702 QPTLWTYGVLIKGLKNEYLLADQRLAALPDVV-PNCSFGYQTTD-------QDAVSVMSA 753

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L  L  G S        N L+  L+  G   +A  L G M+  G+ PD   + +L+   
Sbjct: 754 KLAELDPGLSVQ----VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            R   V+ A+ + K +  +G ++  + Y+ +I  LC+  +   A    E M+   + PDD
Sbjct: 810 LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 869

Query: 538 TVFSTIVKKVADDGMTEEAYK 558
                +V+ V  DG+  + YK
Sbjct: 870 -----VVQAVLIDGLLRDGYK 885



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 199/408 (48%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           I+LI+     + + +    L ++  SG       Y+ ++  L + G   + +     M  
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 208

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G +P+++ YN ++  +  +G    A    K        P   TYT +I   C++  +  
Sbjct: 209 EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDS 268

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A++V + MA EGC P+ VTY++L+N  C  G+ ++A  +I  ++  G+ P + T    + 
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           +L   GC++   ++   M      P V+TY  LI+GLC  GL+  AI  F++M      P
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           + VTYN ++  L +   +  A  +L+L+  + CSP ++TYN +I G    G  +KAM++ 
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M++ G S + +T+ T+I G+C +     A+ +L  +   G K    +Y  +I G CK 
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            K++ A  +   M+     P++  ++ ++     D   + A  L + +
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 198/442 (44%), Gaps = 38/442 (8%)

Query: 162 LIRIDRIEKASKVL---QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
           LI + R+   + V+     M+  G  P+ + YN ++  LCK G +  A  ++ ++  S  
Sbjct: 187 LIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEM 246

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
            PD  TY +++           A+  +    ++GC P  +TY+ LI  +C    +  A +
Sbjct: 247 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           ++ +M + G  P   T    +   C  G Y+DA  +  ++ ++G EPN  TY  L+  L 
Sbjct: 307 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI- 397
             G       +   M+     P   TYN LIN L +   +  A    N M    C P+I 
Sbjct: 367 VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426

Query: 398 ----------------------------------VTYNTVLGALCKEGMLNEALQLLHLL 423
                                             VTYNT++   C  G    AL++L L+
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
               C P   +Y  LI G  K   ME A  L+ +M+++G+ P+++T+  LI G+C+ +++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           + A  LL+ + + G +     Y ++IHGL K      A ++ ++MI     P+   ++ +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           +  +  +G T  A +++ K+IE
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIE 628



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 157/336 (46%), Gaps = 2/336 (0%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S DG F   +  T N ++       ++  A  ++++M R    P+      +I+G   + 
Sbjct: 382 SRDGVF--PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
             +KA  V+  M+  G   + +TYN ++ G C  G   SA+ +LD M   GC+PD  +Y 
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++       K + A G + + +  G  P  +TYT LI+  CK   +  A  +L+ M   
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GC P++ TYN L++   KQ  +  A  +   ++  G+ PN +TY  ++  L   G     
Sbjct: 560 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLA 619

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            ++ + M E    P + TY+ LI  L + G V+ A N F ++      PD +TY  ++ A
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 679

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
               G +  A   L  +  + C P L TY  LI GL
Sbjct: 680 YIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 162/363 (44%), Gaps = 30/363 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T   ++  +C   KL  A+ L++ M R    P+      LI GL + +    A ++ 
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M+  G  P+ +TY  M+ GLCK G    A+ + ++M   GC P+++TY++++R +   
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 648

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK ++A   + +  R G  P  ITY  +IE       +  A   L  M   GC P + TY
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 708

Query: 296 NSLVNF--------------------SCKQGKY---DDAVLVINNLLSRGMEP--NSITY 330
             L+                      +C  G      DAV V++  L+  ++P  +    
Sbjct: 709 GVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQ 767

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N L+ +L + G W   +++L  M      P    YN L+  L +   VD A+  F  M +
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG---- 446
           + C+  +  Y  ++ ALC+     EA      +   + +P  +    LIDGL + G    
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 447 CME 449
           CME
Sbjct: 888 CME 890



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 105/274 (38%), Gaps = 24/274 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +++     GK+ +A  L   + R   IPD    + +I   I   ++E A   L  M
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 179 VMSGGVPDTITYNMMVGGL--------------------CKRGQIRSAIALLDEMSVSGC 218
           + +G  P   TY +++ GL                    C  G   +    +  MS    
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 756

Query: 219 EPD----VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           E D    V   N ++  +   G++ +A       + +G  P    Y  L+  + +   + 
Sbjct: 757 ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+ V   M+ +GC   +  Y  L+   C+  +  +A +   N+L R   P+ +    L+
Sbjct: 817 LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             L   G  D   + L IM    + P+   Y IL
Sbjct: 877 DGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 38.9 bits (89), Expect = 6.8,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 4/182 (2%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCIN----LIRGLIRIDRIEKASKVLQIMVMSGG 183
           CS G  T     + +M+ +    D    +     L+  L    R  +A+++L  M+  G 
Sbjct: 736 CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 795

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            PD   YN ++  L +   +  A+ +   MS  GCE  +  Y  ++  +    + K+A  
Sbjct: 796 CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 855

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +++ L +   P  +   +LI+ + +       +E L  M      P    Y  L   + 
Sbjct: 856 TFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREAS 915

Query: 304 KQ 305
           K+
Sbjct: 916 KK 917


>gi|42408237|dbj|BAD09394.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|215678545|dbj|BAG92200.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 624

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 132/447 (29%), Positives = 223/447 (49%), Gaps = 9/447 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQ----IPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           +L+  C R + +DA   +DI+ RR       PD      L++GL      ++A  +L IM
Sbjct: 140 LLKGLCDRRRTSDA---MDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIM 196

Query: 179 V-MSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
               G  P D + Y  ++ GL + GQ+  A +L D M   G  PDV+TY++I+  +    
Sbjct: 197 ADHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQ 256

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
              +A   +   ++ G  P  I YT L+   C       AI +   M   G  PD+VTY 
Sbjct: 257 AMDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYT 316

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L+++ CK GK  +A  + ++L+ RG +P+S TY TLLH   + G    +  +LD+M + 
Sbjct: 317 ALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKK 376

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
                   +N+++    K+  VD A+  F+ M  +   PDIV Y TVL  LC  G +++A
Sbjct: 377 GMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDA 436

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           L   + L     +P ++ + TLI GL      +K   L  +M++ GI  D I    ++  
Sbjct: 437 LSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGN 496

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C+  +V EA +L   + + G +   + Y  +I G C   K+D A+++L +M+ +  KP 
Sbjct: 497 LCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPS 556

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D  ++TI+   + +G  E+   L +++
Sbjct: 557 DVTYNTIINGYSQNGRIEDGLTLLREM 583



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 204/407 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++      G+L  A  L D M  R   PD     ++I  L +   ++KA++V   MV +G
Sbjct: 213 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 272

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD I Y  +V G C  G+ + AI +  +M   G EPDV+TY  ++  +  NGK  +A 
Sbjct: 273 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 332

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +   +++G  P   TY  L+     +  +    ++LD M  +G       +N ++   
Sbjct: 333 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 392

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K  K D+A+LV +N+  +G+ P+ + Y T+L  L + G  D      + +     +P +
Sbjct: 393 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 452

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             +  LI+GLC     D+      +M+ +    D + +N ++G LCK+G + EA  L  L
Sbjct: 453 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 512

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   TYNTLIDG    G M++AM L G M+ NG+ P D+T+ T+I G+ +  +
Sbjct: 513 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR 572

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +E+ + LL+E+  +G       Y +++ GL ++ +   A ++   MI
Sbjct: 573 IEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 619



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/298 (28%), Positives = 158/298 (53%), Gaps = 6/298 (2%)

Query: 274 ARAIEVLDDMAIEGC---SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           A AI + + M   G    +P+I TY  ++    + G+ D A   +  +++ G+  + I +
Sbjct: 78  AVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRMSPILF 137

Query: 331 NTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           + LL  L   R   DA+D +L  M E    P +F+Y IL+ GLC      +A++  + M 
Sbjct: 138 SPLLKGLCDRRRTSDAMDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMA 197

Query: 390 SKN--CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
                C  D+V Y TV+  L +EG L++A  L   +     SP ++TY+++I  L+K   
Sbjct: 198 DHKGRCPLDVVAYTTVINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQA 257

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           M+KA  ++ +M++NG+ PD I + +L+ G+C + + +EA+ + K++ + G +     Y  
Sbjct: 258 MDKATQVFTRMVKNGVMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTA 317

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++  LCK+ K   A ++ + ++   +KPD T + T++   A +G   E + L   +++
Sbjct: 318 LMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMK 375



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 143/307 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T   ++   C  GK T+A K+ D + +R   PD      L+ G      + +  
Sbjct: 308 VEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMH 367

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L +M+  G       +NM++G   K  ++  A+ +   M   G  PD++ Y T+L  +
Sbjct: 368 DLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDIL 427

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A+  +     +G  P ++ +T LI  +C      +  E+  +M   G   D 
Sbjct: 428 CTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDT 487

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + +N+++   CK+G+  +A  + + ++  G+EPN+ TYNTL+      G  D   K+L +
Sbjct: 488 IFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGV 547

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P+  TYN +ING  + G ++  +    +M  K   P IVTY  +L  L + G 
Sbjct: 548 MVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGR 607

Query: 413 LNEALQL 419
              A +L
Sbjct: 608 TVAAKEL 614


>gi|242092012|ref|XP_002436496.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
 gi|241914719|gb|EER87863.1| hypothetical protein SORBIDRAFT_10g003720 [Sorghum bicolor]
          Length = 698

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 131/461 (28%), Positives = 234/461 (50%), Gaps = 15/461 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC  G++  A +L+D+M      P+     +++ G+ +  R+E A KV   M
Sbjct: 194 TYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM 253

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PD ++YN +VGG CK G    A+++  EM+  G  PDV+T+ +++  M   G  
Sbjct: 254 VKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNL 313

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+G  ++   +G     IT+T LI+  CK+  +  A+  + +M      P +V YN+L
Sbjct: 314 ERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVREMRQCRIQPSVVCYNAL 373

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C  G+ D+A  ++  + ++G++P+ +TY+T+L +    G   +  ++   M E   
Sbjct: 374 INGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGV 433

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY+ LI  LC+   +  A   F  M+S   QPD VTY +++   CKEG +  AL 
Sbjct: 434 LPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALS 493

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL----- 473
           L   +  +   P ++TY+ LI+GL+K    ++A  L  ++      P +I +  L     
Sbjct: 494 LHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRCCR 553

Query: 474 ----------IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
                     + GFC    + EA  + + I  R   +  S Y ++IHG C+   V  A+ 
Sbjct: 554 NAELKSVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREGNVMKALS 613

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             + M+   + P+ T   ++++ + + GM  EA ++ Q+L+
Sbjct: 614 FHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLL 654



 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 228/454 (50%), Gaps = 19/454 (4%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           S   L  A +  D M      P+ +    L+R L      ++A  VL+ M  +G  P+ +
Sbjct: 134 SDASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSVLRDMRGAGCDPNAV 193

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TYN +V   C+ G++  A  L+D M   G +P+++T+N+++  +   G+ + A   + + 
Sbjct: 194 TYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNGICKAGRMEDARKVFDEM 253

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +++G  P  ++Y  L+   CK      A+ V  +M  +G  PD+VT+ SL++  CK G  
Sbjct: 254 VKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPDVVTFTSLIHVMCKAGNL 313

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI--MNEASHSPTVFTYN 366
           + AV ++  +  RG++ N IT+  L+     +G  D  D +L +  M +    P+V  YN
Sbjct: 314 ERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLD--DALLAVREMRQCRIQPSVVCYN 371

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LING C  G +D A     +M +K  +PD+VTY+T+L A CK G  + A QL   +  +
Sbjct: 372 ALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLEN 431

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P  ITY++LI  L ++  +  A VL+  M+  G+ PD++T+ +LI G C+   VE A
Sbjct: 432 GVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERA 491

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS----- 541
           + L  E+ K G       Y ++I+GL KS +   A ++L  +      P +  +      
Sbjct: 492 LSLHDEMVKAGVLPDVVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALMRC 551

Query: 542 ----------TIVKKVADDGMTEEAYKLWQKLIE 565
                      ++K     G+  EA K++Q +++
Sbjct: 552 CRNAELKSVLALLKGFCMKGLMNEADKVYQSILD 585



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 183/348 (52%), Gaps = 1/348 (0%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P V+ YN +L  + D      A  F+   L  G  P + TY IL+  +C +     A
Sbjct: 118 GYAPSVLAYNAVLLALSD-ASLPSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 176

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + VL DM   GC P+ VTYN+LV   C+ G+ D A  +++ +   G++PN +T+N++++ 
Sbjct: 177 LSVLRDMRGAGCDPNAVTYNTLVAAFCRAGEVDRAERLVDMMREGGLKPNLVTFNSVVNG 236

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           +   G  +   K+ D M +   +P   +YN L+ G CK G    A++ F +M  K   PD
Sbjct: 237 ICKAGRMEDARKVFDEMVKEGLAPDGVSYNTLVGGYCKVGCSHEALSVFAEMTRKGIMPD 296

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +VT+ +++  +CK G L  A+ L+  +         IT+  LIDG  KKG ++ A++   
Sbjct: 297 VVTFTSLIHVMCKAGNLERAVGLVREMRERGLQMNEITFTALIDGFCKKGFLDDALLAVR 356

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M +  I P  + +  LI G+C   +++EA +L++E+  +G K     Y  ++   CK+ 
Sbjct: 357 EMRQCRIQPSVVCYNALINGYCMVGRMDEARELVREMEAKGVKPDVVTYSTILSAYCKNG 416

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               A Q+ + M+ +   PD   +S++++ + ++    +A+ L++ +I
Sbjct: 417 DTHSAFQLNQQMLENGVLPDAITYSSLIRVLCEEKRLGDAHVLFKNMI 464



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 102/386 (26%), Positives = 184/386 (47%), Gaps = 22/386 (5%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           ++ +E T   ++  FC +G L DA   +  M R+ +I     C N LI G   + R+++A
Sbjct: 328 LQMNEITFTALIDGFCKKGFLDDALLAVREM-RQCRIQPSVVCYNALINGYCMVGRMDEA 386

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            ++++ M   G  PD +TY+ ++   CK G   SA  L  +M  +G  PD ITY++++R 
Sbjct: 387 RELVREMEAKGVKPDVVTYSTILSAYCKNGDTHSAFQLNQQMLENGVLPDAITYSSLIRV 446

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           + +  +   A   +K+ +  G  P  +TYT LI+  CK+  + RA+ + D+M   G  PD
Sbjct: 447 LCEEKRLGDAHVLFKNMISLGLQPDEVTYTSLIDGHCKEGNVERALSLHDEMVKAGVLPD 506

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VTY+ L+N   K  +  +A  ++  L      P +I Y+ L+     R C +A  K   
Sbjct: 507 VVTYSVLINGLSKSARTKEAQRLLFKLYHEEPVPANIKYDALM-----RCCRNAELK--- 558

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
                       +   L+ G C  GL++ A   +  ++ +N   D   Y+ ++   C+EG
Sbjct: 559 ------------SVLALLKGFCMKGLMNEADKVYQSILDRNWNLDGSVYSVLIHGHCREG 606

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            + +AL     +     +P   +  +LI GL +KG + +A  +  Q++      D    +
Sbjct: 607 NVMKALSFHKQMLQCGFAPNSTSTISLIRGLFEKGMVVEADQVIQQLLNCCSLADAEASK 666

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRG 497
            LI    +   V+  +D+L  + + G
Sbjct: 667 ALIDLNLKEGNVDAVLDVLHGMARDG 692


>gi|218200911|gb|EEC83338.1| hypothetical protein OsI_28730 [Oryza sativa Indica Group]
 gi|258644730|dbj|BAI39975.1| putative fertility restorer homologue [Oryza sativa Indica Group]
          Length = 918

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 220/480 (45%), Gaps = 35/480 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G + DA  ++  +      PD     ++I G  R   ++ A +V   M  
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV------------------------- 215
            G  P+T+TY+ ++ GLC  G++  A  L+ EM +                         
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 216 ----------SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                      GCEP+V TY  ++  +  +G  K AIG +    R G  P  +TY  LI 
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            + +   I  A  VL+ M   GCSP+IVTYN ++   C  G    A+LV+NN+L RG   
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N +TYNT++      G   +  +ILD+M +    P  ++Y  LI G CK   ++ A   F
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           N+MV     P+ VTY  ++   CK+  L+ A  LL  +  S C P + TYN LI GL K+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
                A  L   M+E GI P+ +T+  +I G C+      A+++  ++ ++G       Y
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I  L +  KV+ A  +   +      PD+  +  +++     G  E A+    ++I+
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 208/437 (47%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T + ++   C  G++ +A  LI  M     +P  H C   I  L  +   E A +
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G  P+  TY  ++ GLC  G ++ AI L   MS  G  P+ +TYN ++  + 
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +N + K A        R GC P ++TY  +I+  C      +A+ V+++M   G S ++V
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+++   C  G    A+ +++ +   G +P+  +Y  L+         ++   + + M
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P   TY  LI+G CK   +D A +    M    C+P++ TYN ++  L K+   
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A +L  ++      P ++TY  +IDGL K G    A+ ++ +M+E G  P+ +T+ +L
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I    +  +VEEA +L  E+ + G       Y  +I     S KV+ A   L  MI +  
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 534 KPDDTVFSTIVKKVADD 550
           +P    +  ++K + ++
Sbjct: 702 QPTLWTYGVLIKGLKNE 718



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 217/441 (49%), Gaps = 18/441 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I++ +C  G  T A +++D+M      PD      LI G  +I ++E A  +   M
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+ +TY  ++ G CK  ++ +A +LL+ M  SGC P+V TYN ++  +     F
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    K  + +G  P ++TYT +I+ +CK    + A+E+ + M  +GC P+++TY+SL
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    ++GK ++A  +   L   G+ P+ ITY  ++ +    G  +     L  M +A  
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 359 SPTVFTYNILINGL-CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            PT++TY +LI GL  +Y L D+ + +   +V  NC     T +       ++ +   + 
Sbjct: 702 QPTLWTYGVLIKGLKNEYLLADQRLAALPDVV-PNCSFGYQTTD-------QDAVSVMSA 753

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L  L  G S        N L+  L+  G   +A  L G M+  G+ PD   + +L+   
Sbjct: 754 KLAELDPGLSVQ----VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            R   V+ A+ + K +  +G ++  + Y+ +I  LC+  +   A    E M+   + PDD
Sbjct: 810 LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 869

Query: 538 TVFSTIVKKVADDGMTEEAYK 558
                +V+ V  DG+  + YK
Sbjct: 870 -----VVQAVLIDGLLRDGYK 885



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/408 (25%), Positives = 199/408 (48%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           I+LI+     + + +    L ++  SG       Y+ ++  L + G   + +     M  
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 208

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G +P+++ YN ++  +  +G    A    K        P   TYT +I   C++  +  
Sbjct: 209 EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDS 268

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A++V + MA EGC P+ VTY++L+N  C  G+ ++A  +I  ++  G+ P + T    + 
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           +L   GC++   ++   M      P V+TY  LI+GLC  G++  AI  F++M      P
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGILKVAIGLFHRMSRDGVFP 388

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           + VTYN ++  L +   +  A  +L+L+  + CSP ++TYN +I G    G  +KAM++ 
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M++ G S + +T+ T+I G+C +     A+ +L  +   G K    +Y  +I G CK 
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            K++ A  +   M+     P++  ++ ++     D   + A  L + +
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 198/442 (44%), Gaps = 38/442 (8%)

Query: 162 LIRIDRIEKASKVL---QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
           LI + R+   + V+     M+  G  P+ + YN ++  LCK G +  A  ++ ++  S  
Sbjct: 187 LIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEM 246

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
            PD  TY +++           A+  +    ++GC P  +TY+ LI  +C    +  A +
Sbjct: 247 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           ++ +M + G  P   T    +   C  G Y+DA  +  ++ ++G EPN  TY  L+  L 
Sbjct: 307 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI- 397
             G       +   M+     P   TYN LIN L +   +  A    N M    C P+I 
Sbjct: 367 VSGILKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426

Query: 398 ----------------------------------VTYNTVLGALCKEGMLNEALQLLHLL 423
                                             VTYNT++   C  G    AL++L L+
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
               C P   +Y  LI G  K   ME A  L+ +M+++G+ P+++T+  LI G+C+ +++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           + A  LL+ + + G +     Y ++IHGL K      A ++ ++MI     P+   ++ +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           +  +  +G T  A +++ K+IE
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIE 628



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 157/336 (46%), Gaps = 2/336 (0%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S DG F   +  T N ++       ++  A  ++++M R    P+      +I+G   + 
Sbjct: 382 SRDGVF--PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
             +KA  V+  M+  G   + +TYN ++ G C  G   SA+ +LD M   GC+PD  +Y 
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++       K + A G + + +  G  P  +TYT LI+  CK   +  A  +L+ M   
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GC P++ TYN L++   KQ  +  A  +   ++  G+ PN +TY  ++  L   G     
Sbjct: 560 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLA 619

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            ++ + M E    P + TY+ LI  L + G V+ A N F ++      PD +TY  ++ A
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 679

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
               G +  A   L  +  + C P L TY  LI GL
Sbjct: 680 YIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  128 bits (321), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 162/363 (44%), Gaps = 30/363 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T   ++  +C   KL  A+ L++ M R    P+      LI GL + +    A ++ 
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M+  G  P+ +TY  M+ GLCK G    A+ + ++M   GC P+++TY++++R +   
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 648

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK ++A   + +  R G  P  ITY  +IE       +  A   L  M   GC P + TY
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 708

Query: 296 NSLVNF--------------------SCKQGKY---DDAVLVINNLLSRGMEP--NSITY 330
             L+                      +C  G      DAV V++  L+  ++P  +    
Sbjct: 709 GVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQ 767

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N L+ +L + G W   +++L  M      P    YN L+  L +   VD A+  F  M +
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG---- 446
           + C+  +  Y  ++ ALC+     EA      +   + +P  +    LIDGL + G    
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 447 CME 449
           CME
Sbjct: 888 CME 890



 Score = 65.5 bits (158), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 105/274 (38%), Gaps = 24/274 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +++     GK+ +A  L   + R   IPD    + +I   I   ++E A   L  M
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 179 VMSGGVPDTITYNMMVGGL--------------------CKRGQIRSAIALLDEMSVSGC 218
           + +G  P   TY +++ GL                    C  G   +    +  MS    
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 756

Query: 219 EPD----VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           E D    V   N ++  +   G++ +A       + +G  P    Y  L+  + +   + 
Sbjct: 757 ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+ V   M+ +GC   +  Y  L+   C+  +  +A +   N+L R   P+ +    L+
Sbjct: 817 LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             L   G  D   + L IM    + P+   Y IL
Sbjct: 877 DGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 38.9 bits (89), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 4/182 (2%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCIN----LIRGLIRIDRIEKASKVLQIMVMSGG 183
           CS G  T     + +M+ +    D    +     L+  L    R  +A+++L  M+  G 
Sbjct: 736 CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 795

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            PD   YN ++  L +   +  A+ +   MS  GCE  +  Y  ++  +    + K+A  
Sbjct: 796 CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 855

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +++ L +   P  +   +LI+ + +       +E L  M      P    Y  L   + 
Sbjct: 856 TFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREAS 915

Query: 304 KQ 305
           K+
Sbjct: 916 KK 917


>gi|224079730|ref|XP_002305930.1| predicted protein [Populus trichocarpa]
 gi|222848894|gb|EEE86441.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  217 bits (552), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 122/391 (31%), Positives = 207/391 (52%), Gaps = 6/391 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL ++ +  +A ++   MV  G  PD  TY  ++ GLCK G+   A  L  +M  +G
Sbjct: 51  LINGLGKVGKFAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAG 110

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+ +V+TY+T++ ++    +  +A+  +     K   P + TYT LI+ +C       A 
Sbjct: 111 CQLNVVTYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEAS 170

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L++M      P++VT+N LV+  CK+GK   A  V+  +   G+EP+ +TYN+L++  
Sbjct: 171 ALLNEMTSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGY 230

Query: 338 GSRGCWDAV---DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                W  V    K+ D+M      P VF+Y+ILING CK   +D A   FN+M+ +   
Sbjct: 231 SM---WTEVVEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGST 287

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+ V+YNT++  LC+ G L EA  L   ++ +   P L TY  L+DG  K+G + KA  L
Sbjct: 288 PNNVSYNTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRL 347

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +  M    + P+ + +  L+   C++  +++A +L  E+   G +     Y  +I+GLCK
Sbjct: 348 FRAMQSTYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCK 407

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
              +D A++    M      PD+  ++ I++
Sbjct: 408 EGLLDEALEAFRNMEDDGCPPDEFSYNVIIR 438



 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 115/406 (28%), Positives = 208/406 (51%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI    ++ R++    VL   +  G  P  +T+  ++ GL K G+   A+ L D+M   G
Sbjct: 16  LINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGKFAQAVELFDDMVARG 75

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+PD  TY TI+  +   G+   A G +K     GC   ++TY+ LI  +CK   +  A+
Sbjct: 76  CQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEAL 135

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++   M  +  SP I TY SL+   C   ++ +A  ++N + S  + PN +T+N L+ + 
Sbjct: 136 DIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTF 195

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G   A + +L  M E    P V TYN L+ G   +  V  A   F+ M++K C+PD+
Sbjct: 196 CKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDV 255

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            +Y+ ++   CK   ++EA QL + +     +P  ++YNTLI GL + G + +A  L+  
Sbjct: 256 FSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKN 315

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M  NG  P+  T+  L+ GFC+   + +A  L + +     K     Y ++++ +CKS  
Sbjct: 316 MHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGN 375

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +  A ++   +     +P+  +++TI+  +  +G+ +EA + ++ +
Sbjct: 376 LKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNM 421



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 114/382 (29%), Positives = 190/382 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T   I+   C  G+   A+ L   M       +      LI  L +  R+ +A  + 
Sbjct: 79  DDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYSTLIHSLCKYRRVNEALDIF 138

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M      P   TY  ++ GLC   + + A ALL+EM+     P+V+T+N ++ T    
Sbjct: 139 SYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLNIMPNVVTFNVLVDTFCKE 198

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A G  K     G  P ++TY  L+        +  A ++ D M  +GC PD+ +Y
Sbjct: 199 GKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEARKLFDVMITKGCKPDVFSY 258

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+N  CK  + D+A  + N ++ +G  PN+++YNTL+H L   G       +   M+ 
Sbjct: 259 SILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGLCQLGRLREAQDLFKNMHT 318

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             + P ++TY IL++G CK G + +A   F  M S   +P++V YN ++ A+CK G L +
Sbjct: 319 NGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNLVMYNILVNAMCKSGNLKD 378

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   L      P +  Y T+I+GL K+G +++A+  +  M ++G  PD+ ++  +I 
Sbjct: 379 ARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEAFRNMEDDGCPPDEFSYNVIIR 438

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           GF +      AV L+ E+  RG
Sbjct: 439 GFLQHKDESRAVHLIGEMRDRG 460



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 204/387 (52%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M ++G  P+T T N+++   C+  ++    ++L +    G +P ++T+ T++  +   GK
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F QA+  + D + +GC P   TYT +I  +CK    A A  +   M   GC  ++VTY++
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  CK  + ++A+ + + + ++ + P   TY +L+  L +   W     +L+ M   +
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V T+N+L++  CK G V  A      M     +PD+VTYN+++        + EA 
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEVVEAR 240

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L  ++    C P + +Y+ LI+G  K   +++A  L+ +M+  G +P+++++ TLI G 
Sbjct: 241 KLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLIHGL 300

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  ++ EA DL K +   GN      Y +++ G CK   +  A ++   M S+  KP+ 
Sbjct: 301 CQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLKPNL 360

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
            +++ +V  +   G  ++A +L+ +L 
Sbjct: 361 VMYNILVNAMCKSGNLKDARELFSELF 387



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 180/348 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++ + C   ++ +A  +   M  ++  P      +LI+GL    R ++AS +L  M
Sbjct: 117 TYSTLIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEM 176

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                +P+ +T+N++V   CK G++ +A  +L  M+  G EPDV+TYN+++       + 
Sbjct: 177 TSLNIMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGVEPDVVTYNSLMYGYSMWTEV 236

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +   + KGC P + +Y+ILI   CK   I  A ++ ++M  +G +P+ V+YN+L
Sbjct: 237 VEARKLFDVMITKGCKPDVFSYSILINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTL 296

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C+ G+  +A  +  N+ + G  PN  TY  LL     +G      ++   M     
Sbjct: 297 IHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYL 356

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +  YNIL+N +CK G +  A   F+++     QP++  Y T++  LCKEG+L+EAL+
Sbjct: 357 KPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALE 416

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
               +    C P   +YN +I G  +     +A+ L G+M + G   D
Sbjct: 417 AFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITD 464



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 70/263 (26%), Positives = 126/263 (47%), Gaps = 16/263 (6%)

Query: 76  DEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTD 135
           D +  E  VLA    L+  T+T+   +P            D  T N ++  +    ++ +
Sbjct: 193 DTFCKEGKVLAAEGVLK--TMTEMGVEP------------DVVTYNSLMYGYSMWTEVVE 238

Query: 136 ASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           A KL D+M  +   PD F + I LI G  +  RI++A ++   M+  G  P+ ++YN ++
Sbjct: 239 ARKLFDVMITKGCKPDVFSYSI-LINGYCKAKRIDEAKQLFNEMIHQGSTPNNVSYNTLI 297

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            GLC+ G++R A  L   M  +G  P++ TY  +L      G   +A   ++        
Sbjct: 298 HGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQSTYLK 357

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P L+ Y IL+  +CK   +  A E+  ++ + G  P++  Y +++N  CK+G  D+A+  
Sbjct: 358 PNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDEALEA 417

Query: 315 INNLLSRGMEPNSITYNTLLHSL 337
             N+   G  P+  +YN ++   
Sbjct: 418 FRNMEDDGCPPDEFSYNVIIRGF 440



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/216 (29%), Positives = 98/216 (45%)

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M  A  SP   T NILIN  C+   VD   +   + +    QP IVT+ T++  L K G 
Sbjct: 1   MELAGLSPNTCTLNILINCFCQLQRVDLGFSVLAKGIKLGLQPTIVTFTTLINGLGKVGK 60

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             +A++L   +    C P   TY T+I+GL K G    A  L+ +M E G   + +T+ T
Sbjct: 61  FAQAVELFDDMVARGCQPDDYTYTTIINGLCKIGETALAAGLFKKMEEAGCQLNVVTYST 120

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI   C+  +V EA+D+   +  +        Y  +I GLC   +   A  +L  M S  
Sbjct: 121 LIHSLCKYRRVNEALDIFSYMKAKDISPTIFTYTSLIQGLCNFSRWKEASALLNEMTSLN 180

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             P+   F+ +V     +G    A  + + + E  V
Sbjct: 181 IMPNVVTFNVLVDTFCKEGKVLAAEGVLKTMTEMGV 216



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 44/174 (25%), Positives = 84/174 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G+L +A  L   M     +P+ +    L+ G  +   + KA ++ + M  
Sbjct: 294 NTLIHGLCQLGRLREAQDLFKNMHTNGNLPNLYTYAILLDGFCKQGYLGKAFRLFRAMQS 353

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +   P+ + YN++V  +CK G ++ A  L  E+ V G +P+V  Y TI+  +   G   +
Sbjct: 354 TYLKPNLVMYNILVNAMCKSGNLKDARELFSELFVIGLQPNVQIYTTIINGLCKEGLLDE 413

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           A+  +++    GCPP   +Y ++I    +    +RA+ ++ +M   G   D  T
Sbjct: 414 ALEAFRNMEDDGCPPDEFSYNVIIRGFLQHKDESRAVHLIGEMRDRGFITDAGT 467


>gi|356548144|ref|XP_003542463.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 756

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 139/505 (27%), Positives = 245/505 (48%), Gaps = 43/505 (8%)

Query: 94  LTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKL-TDASKLIDIMARRNQI-PD 151
           LT+ ++ H   +P         DE T    L+ + +   L  + + L  +M R   + PD
Sbjct: 112 LTLLRQMHSSKIPV--------DESTFLIFLETYATSHHLHAEINPLFLLMERDFAVKPD 163

Query: 152 FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD 211
             F    +  L++ ++++    +   MV     PD  T+N+++  LCK  Q+R AI +L+
Sbjct: 164 TRFYNVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLE 223

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP----------------- 254
           +M   G  PD  T+ T+++   +    + A+   +  +  GC                  
Sbjct: 224 DMPNYGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEG 283

Query: 255 ----------------PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
                           P  +T+  L+  +C+   I + +E++D M  +G   D+ TYNSL
Sbjct: 284 RIEEALRFIYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSL 343

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G+ D+AV ++++++SR  EPN++TYNTL+ +L      +A  ++  ++     
Sbjct: 344 ISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGV 403

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V T+N LI GLC     + A+  F +M  K C PD  TY+ ++ +LC E  L EAL 
Sbjct: 404 LPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALM 463

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +  S C+  ++ YNTLIDGL K   +  A  ++ QM   G+S   +T+ TLI G C
Sbjct: 464 LLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLC 523

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           ++ +VEEA  L+ ++   G K     Y  ++   C+   +  A  +++ M  +  +PD  
Sbjct: 524 KSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIV 583

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            + T++  +   G  + A KL + +
Sbjct: 584 TYGTLIGGLCKAGRVDVASKLLRSV 608



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 224/452 (49%), Gaps = 5/452 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKV 174
           DEKT   ++Q F     +  A ++ ++M     ++      + L+ GL +  RIE+A + 
Sbjct: 233 DEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNV-LVNGLCKEGRIEEALRF 291

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             I    G  PD +T+N +V GLC+ G I+  + ++D M   G E DV TYN+++  +  
Sbjct: 292 --IYEEEGFCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLISGLCK 349

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+  +A+      + + C P  +TY  LI  +CK+  +  A E+   +  +G  PD+ T
Sbjct: 350 LGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLPDVCT 409

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +NSL+   C     + A+ +   +  +G +P+  TY+ L+ SL S         +L  M 
Sbjct: 410 FNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLCSERRLKEALMLLKEME 469

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            +  +  V  YN LI+GLCK   V  A + F+QM         VTYNT++  LCK   + 
Sbjct: 470 LSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSVTYNTLINGLCKSKRVE 529

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA QL+  +      P   TY T++    ++G +++A  +   M  NG  PD +T+ TLI
Sbjct: 530 EAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNMTLNGCEPDIVTYGTLI 589

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+A +V+ A  LL+ +  +G  +   AY  VI  LCK K+   A+++   M+     
Sbjct: 590 GGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRTKEAMRLFREMMEKGDP 649

Query: 535 PDDTVFSTIVKKVAD-DGMTEEAYKLWQKLIE 565
           PD   +  + + + +  G  +EA     +++E
Sbjct: 650 PDVITYKIVFRGLCNGGGPIQEAVDFTVEMLE 681



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 206/423 (48%), Gaps = 4/423 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++   C  G++ +A +++  M  R+  P+      LI  L + + +E A++
Sbjct: 334 ELDVYTYNSLISGLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATE 393

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + +++   G +PD  T+N ++ GLC       A+ L +EM   GC+PD  TY+ ++ ++ 
Sbjct: 394 LARVLTSKGVLPDVCTFNSLIQGLCLTSNREIAMELFEEMKEKGCDPDEFTYSILIESLC 453

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              + K+A+   K+    GC   ++ Y  LI+ +CK   +  A ++ D M + G S   V
Sbjct: 454 SERRLKEALMLLKEMELSGCARNVVVYNTLIDGLCKNNRVGDAEDIFDQMEMLGVSRSSV 513

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L+N  CK  + ++A  +++ ++  G++P+  TY T+L     +G       I+  M
Sbjct: 514 TYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAADIVQNM 573

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P + TY  LI GLCK G VD A      +  K        YN V+ ALCK    
Sbjct: 574 TLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQALCKRKRT 633

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAK-KGCMEKAMVLYGQMMENGISPDDITHRT 472
            EA++L   +      P +ITY  +  GL    G +++A+    +M+E GI P+  +   
Sbjct: 634 KEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPEFPSFGF 693

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L  G C     +  + L+  + ++G   ++     +I G  K +K + A+  L  ++  R
Sbjct: 694 LAEGLCSLSMEDTLIQLINMVMEKGRFSQSETS--IIRGFLKIQKFNDALANLGAIL-DR 750

Query: 533 YKP 535
            KP
Sbjct: 751 KKP 753



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 89/390 (22%), Positives = 174/390 (44%), Gaps = 15/390 (3%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS---GCEPDVITYNTILRTMFDNGKFKQ 240
           +P   + + ++  L ++    SA++L    S        P V  ++ +LR +   G F  
Sbjct: 53  LPPDFSPSQLLDLLRRQPDSSSALSLFQWASAQPNYSAHPSV--FHELLRQLARAGSFDS 110

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL-----DDMAIEGCSPDIVTY 295
            +   +       P    T+ I +E       +   I  L      D A++   PD   Y
Sbjct: 111 MLTLLRQMHSSKIPVDESTFLIFLETYATSHHLHAEINPLFLLMERDFAVK---PDTRFY 167

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N  ++   K  K      + + +++  + P+  T+N L+ +L           +L+ M  
Sbjct: 168 NVALSLLVKANKLKLVETLHSKMVADAVPPDVSTFNILIRALCKAHQLRPAILMLEDMPN 227

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   T+  L+ G  +   V+ A+     MV   C+   V+ N ++  LCKEG + E
Sbjct: 228 YGLRPDEKTFTTLMQGFIEEADVEGALRIKELMVESGCELTSVSVNVLVNGLCKEGRIEE 287

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL+ ++   G    P  +T+N L++GL + G +++ + +   M+E G   D  T+ +LI 
Sbjct: 288 ALRFIYEEEG--FCPDQVTFNALVNGLCRTGHIKQGLEMMDFMLEKGFELDVYTYNSLIS 345

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  +++EAV++L  +  R  +     Y  +I  LCK   V+ A ++  ++ S    P
Sbjct: 346 GLCKLGEIDEAVEILHHMVSRDCEPNTVTYNTLIGTLCKENHVEAATELARVLTSKGVLP 405

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   F+++++ +      E A +L++++ E
Sbjct: 406 DVCTFNSLIQGLCLTSNREIAMELFEEMKE 435



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 54/211 (25%), Positives = 106/211 (50%), Gaps = 1/211 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V     T N ++   C   ++ +A++L+D M      PD      +++   +   I++A+
Sbjct: 508 VSRSSVTYNTLINGLCKSKRVEEAAQLMDQMIMEGLKPDKFTYTTMLKYFCQQGDIKRAA 567

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++Q M ++G  PD +TY  ++GGLCK G++  A  LL  + + G       YN +++ +
Sbjct: 568 DIVQNMTLNGCEPDIVTYGTLIGGLCKAGRVDVASKLLRSVQMKGMVLTPQAYNPVIQAL 627

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG-IARAIEVLDDMAIEGCSPD 291
               + K+A+  +++ + KG PP +ITY I+   +C   G I  A++   +M  +G  P+
Sbjct: 628 CKRKRTKEAMRLFREMMEKGDPPDVITYKIVFRGLCNGGGPIQEAVDFTVEMLEKGILPE 687

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
             ++  L    C     D  + +IN ++ +G
Sbjct: 688 FPSFGFLAEGLCSLSMEDTLIQLINMVMEKG 718


>gi|302816541|ref|XP_002989949.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
 gi|300142260|gb|EFJ08962.1| hypothetical protein SELMODRAFT_130917 [Selaginella moellendorffii]
          Length = 447

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 140/435 (32%), Positives = 225/435 (51%), Gaps = 28/435 (6%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P+ H    LIRG  +  ++ +A  V   M  SG +P+  T N ++ GLC+ GQ+ SA+ L
Sbjct: 23  PNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALKL 82

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
             EM      P   ++N +LR  F  G+   AI F+K+    G  P L +Y IL+  +  
Sbjct: 83  FREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGVEPDLESYHILLSALSD 139

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +A A  +   M    CSPDI+TYN L++  CK G+  +A  ++  +L  G EPN  T
Sbjct: 140 SGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFT 196

Query: 330 YNTLLHSLGSRGCWDAVDKILDI------MNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           Y+ +++      C+  +DK+ +       M E++  P   T+N LI G CK G+++ AI 
Sbjct: 197 YSIIIN------CYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIK 250

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKE-GMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
            F +M    C+  IVTYNT++ +LCK+ G +  A+ L + L G+  +P ++TYN+LI G 
Sbjct: 251 LFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGF 310

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
           +++      + L   M   G  PD IT+  LI G C A++VE+A  L   +    N    
Sbjct: 311 SERA--NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQRLFNGMACAPNV--- 365

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           + +  +I GLC  KKV+ A  +L+ M +    PD T F+TI+      G   +A ++ + 
Sbjct: 366 TTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKAGAMHDAREVMKD 421

Query: 563 LIEWKVFEKGTTLLA 577
           +++   +    T  A
Sbjct: 422 MLKHGFYPNTYTTYA 436



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/403 (30%), Positives = 202/403 (50%), Gaps = 18/403 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +  T N +L   C  G+++ A KL   M     +P       L+RG     R   A +  
Sbjct: 59  NASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFF 115

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  SG  PD  +Y++++  L   G++  A AL   M+   C PD++TYN ++      
Sbjct: 116 KEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKI 172

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A    K+ L+ G  P + TY+I+I   CK   +  A EV   M    C P+ VT+
Sbjct: 173 GQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTF 232

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR--GCWDAVDKILDIM 353
           N+L+   CK G  +DA+ +   +   G +   +TYNTL+ SL  +  G + AVD + + +
Sbjct: 233 NTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVD-LFNKL 291

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
             A  +PT+ TYN LI G  +    +  +     M ++ C+PD++TYN ++  LC    +
Sbjct: 292 EGAGLTPTIVTYNSLIQGFSERA--NDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRV 349

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +A +L    NG +C+P + T+N LI GL  +  +E+A  +  +M     +PD  T  T+
Sbjct: 350 EDAQRLF---NGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRM----TAPDMTTFNTI 402

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           I  FC+A  + +A +++K++ K G          + HG+  SK
Sbjct: 403 ILAFCKAGAMHDAREVMKDMLKHGFYPNTYTTYALAHGIQSSK 445



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 167/310 (53%), Gaps = 15/310 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D ++ + +L      G++ +A  L   M     I  ++    L+ G  +I +  +A 
Sbjct: 123 VEPDLESYHILLSALSDSGRMAEAHALFSAMTCSPDIMTYNV---LMDGYCKIGQTYEAQ 179

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +++ ++ +G  P+  TY++++   CK  ++  A  +  +M  S C P+ +T+NT++   
Sbjct: 180 SLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGF 239

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ-CGIARAIEVLDDMAIEGCSPD 291
              G  + AI  + +  + GC   ++TY  LI+ +CK+  G+  A+++ + +   G +P 
Sbjct: 240 CKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPT 299

Query: 292 IVTYNSLVN-FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           IVTYNSL+  FS    + +D + ++ ++ + G +P+ ITYN L+  L S    + V+   
Sbjct: 300 IVTYNSLIQGFS---ERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSA---NRVEDAQ 353

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
            + N  + +P V T+N LI GLC    V+ A N  ++M +    PD+ T+NT++ A CK 
Sbjct: 354 RLFNGMACAPNVTTFNFLIRGLCAQKKVEEARNILDRMTA----PDMTTFNTIILAFCKA 409

Query: 411 GMLNEALQLL 420
           G +++A +++
Sbjct: 410 GAMHDAREVM 419



 Score =  126 bits (317), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 140/276 (50%), Gaps = 7/276 (2%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P+  TYN L+   CK G+   AV V +++ S G+ PN+ T NTLL  L   G   +  K
Sbjct: 22  APNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALK 81

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M      PT  ++NIL+ G   + +  RAI  F +M +   +PD+ +Y+ +L AL 
Sbjct: 82  LFREMQAGPFLPTSASHNILLRG---FFMAGRAIEFFKEMKASGVEPDLESYHILLSALS 138

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G + EA  L   +   +CSP ++TYN L+DG  K G   +A  L  ++++ G  P+  
Sbjct: 139 DSGRMAEAHALFSAM---TCSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVF 195

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  +I  +C+ D+VEEA ++  ++ +         +  +I G CK+  ++ AI++   M
Sbjct: 196 TYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEM 255

Query: 529 ISSRYKPDDTVFSTIVKKVADD-GMTEEAYKLWQKL 563
                K     ++T++  +    G    A  L+ KL
Sbjct: 256 EKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKL 291



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 90/187 (48%), Gaps = 6/187 (3%)

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D+A+  F ++++    P+  TYN ++   CK G +++A+ +   +  S   P   T NTL
Sbjct: 7   DQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTL 66

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           + GL + G M  A+ L+ +M      P   +H  L+ GF  A +   A++  KE+   G 
Sbjct: 67  LLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGR---AIEFFKEMKASGV 123

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +    +Y +++  L  S ++  A  +   M  S   PD   ++ ++      G T EA  
Sbjct: 124 EPDLESYHILLSALSDSGRMAEAHALFSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQS 180

Query: 559 LWQKLIE 565
           L +++++
Sbjct: 181 LMKEILK 187


>gi|356532716|ref|XP_003534917.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 527

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 235/452 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T N ++  FC  G++T +  ++  + +    P+      L++GL     ++K+ 
Sbjct: 41  IEPDLFTLNILINCFCHLGQMTFSFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSL 100

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                +V  G   D ++Y  ++ GLCK G+ RSA+ LL  +      P+V+ YNTI+  +
Sbjct: 101 HFHDKVVAQGFQMDQVSYATLLNGLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGL 160

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +    +A   + +   +G  P +ITY+ LI   C    +  A  +L++M ++  +P++
Sbjct: 161 CKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNV 220

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY  L++  CK+GK  +A  ++  +   G++PN ++YNTL+      G      ++   
Sbjct: 221 YTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHT 280

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +   +P V++YNI+I+ LCK   VD A+N   +++ KN  P+ VTY++++   CK G 
Sbjct: 281 MVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGR 340

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +  AL LL  +        ++TY +L+D L K   ++KA  L+ +M E GI P+  T+  
Sbjct: 341 ITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTA 400

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C+  + + A  L + +  +G ++    Y ++I GLCK   +D A+ +   M  + 
Sbjct: 401 LIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENG 460

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             PD   F  I++ + +    ++A KL  ++I
Sbjct: 461 CIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMI 492



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 113/419 (26%), Positives = 219/419 (52%), Gaps = 1/419 (0%)

Query: 146 RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRS 205
           R+  P   F   ++  L+++     A  + + M + G  PD  T N+++   C  GQ+  
Sbjct: 5   RDTPPIMEFN-KIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTF 63

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           +  +L ++   G +P+ IT NT+++ +   G+ K+++ F    + +G     ++Y  L+ 
Sbjct: 64  SFTVLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLN 123

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            +CK      A+++L  +      P++V YN++++  CK    ++A  + + + +RG+ P
Sbjct: 124 GLCKIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFP 183

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N ITY+TL++     G       +L+ M   + +P V+TY IL++ LCK G V  A N  
Sbjct: 184 NVITYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLL 243

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
             M  +  +P++V+YNT++   C  G +  A Q+ H +     +P + +YN +ID L K 
Sbjct: 244 AVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKS 303

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             +++AM L  +++   + P+ +T+ +LI GFC+  ++  A+DLLKE+  RG       Y
Sbjct: 304 KRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTY 363

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             ++  LCK++ +D A  +   M     +P+   ++ ++  +   G  + A KL+Q L+
Sbjct: 364 TSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLL 422



 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/416 (28%), Positives = 213/416 (51%), Gaps = 8/416 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N +++  C +G++  +    D ++A+  Q+    +   L+ GL +I     A K+L++
Sbjct: 82  TLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYA-TLLNGLCKIGETRSALKLLRM 140

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +      P+ + YN ++ GLCK   +  A  L  EM   G  P+VITY+T++      G+
Sbjct: 141 IEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLIYGFCLAGQ 200

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A G   + + K   P + TYTIL++ +CK+  +  A  +L  M  EG  P++V+YN+
Sbjct: 201 LMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNT 260

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C  G+  +A  + + ++ +G+ PN  +YN ++  L        VD+ ++++ E  
Sbjct: 261 LMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKS---KRVDEAMNLLREVL 317

Query: 358 HS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           H    P   TY+ LI+G CK G +  A++   +M  +    D+VTY ++L ALCK   L+
Sbjct: 318 HKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCKNQNLD 377

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A  L   +      P   TY  LIDGL K G  + A  L+  ++  G   +  T+  +I
Sbjct: 378 KATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWTYNVMI 437

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            G C+   ++EA+ +  ++ + G       + ++I  L +  + D A ++L  MI+
Sbjct: 438 SGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIRSLFEKDQNDKAEKLLHEMIA 493



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 224/446 (50%), Gaps = 2/446 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMV 179
           NKI+ +         A  L   M  +   PD  F +N LI     + ++  +  VL  ++
Sbjct: 14  NKIVGSLVKMKHYPTAISLFKQMQVKGIEPDL-FTLNILINCFCHLGQMTFSFTVLGKIL 72

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  P+TIT N ++ GLC +G+++ ++   D++   G + D ++Y T+L  +   G+ +
Sbjct: 73  KLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLCKIGETR 132

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            A+   +    +   P ++ Y  +I+ +CK   +  A ++  +M   G  P+++TY++L+
Sbjct: 133 SALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVITYSTLI 192

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C  G+  +A  ++N ++ + + PN  TY  L+ +L   G       +L +M +    
Sbjct: 193 YGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVMTKEGVK 252

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P V +YN L++G C  G V  A   F+ MV K   P++ +YN ++  LCK   ++EA+ L
Sbjct: 253 PNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGVNPNVYSYNIMIDRLCKSKRVDEAMNL 312

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +   +  P  +TY++LIDG  K G +  A+ L  +M   G   D +T+ +L+   C+
Sbjct: 313 LREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYHRGQPADVVTYTSLLDALCK 372

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              +++A  L  ++ +RG +     Y  +I GLCK  +   A ++ + ++    + +   
Sbjct: 373 NQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKNAQKLFQHLLVKGCRINVWT 432

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++ ++  +  +GM +EA  +  K+ E
Sbjct: 433 YNVMISGLCKEGMLDEALAMKSKMEE 458



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 86/280 (30%), Positives = 146/280 (52%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P I+ +N +V    K   Y  A+ +   +  +G+EP+  T N L++     G       
Sbjct: 7   TPPIMEFNKIVGSLVKMKHYPTAISLFKQMQVKGIEPDLFTLNILINCFCHLGQMTFSFT 66

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  + +  + P   T N L+ GLC  G V ++++  +++V++  Q D V+Y T+L  LC
Sbjct: 67  VLGKILKLGYQPNTITLNTLMKGLCLKGEVKKSLHFHDKVVAQGFQMDQVSYATLLNGLC 126

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G    AL+LL ++   S  P ++ YNT+IDGL K   + +A  LY +M   GI P+ I
Sbjct: 127 KIGETRSALKLLRMIEDRSTRPNVVMYNTIIDGLCKDKLVNEAYDLYSEMDARGIFPNVI 186

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ TLI+GFC A Q+ EA  LL E+  +        Y +++  LCK  KV  A  +L +M
Sbjct: 187 TYSTLIYGFCLAGQLMEAFGLLNEMILKNINPNVYTYTILMDALCKEGKVKEAKNLLAVM 246

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
                KP+   ++T++      G  + A +++  +++  V
Sbjct: 247 TKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKGV 286



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 71/270 (26%), Positives = 132/270 (48%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  GK+ +A  L+ +M +    P+      L+ G   I  ++ A ++   MV  G
Sbjct: 226 LMDALCKEGKVKEAKNLLAVMTKEGVKPNVVSYNTLMDGYCLIGEVQNAKQMFHTMVQKG 285

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  +YN+M+  LCK  ++  A+ LL E+      P+ +TY++++      G+   A+
Sbjct: 286 VNPNVYSYNIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSAL 345

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              K+   +G P  ++TYT L++ +CK   + +A  +   M   G  P+  TY +L++  
Sbjct: 346 DLLKEMYHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGL 405

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G++ +A  +  +LL +G   N  TYN ++  L   G  D    +   M E    P  
Sbjct: 406 CKGGRHKNAQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDA 465

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKN 392
            T+ I+I  L +    D+A    ++M++K+
Sbjct: 466 VTFEIIIRSLFEKDQNDKAEKLLHEMIAKD 495



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/203 (25%), Positives = 101/203 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C   ++ +A  L+  +  +N +P+     +LI G  ++ RI  A  +L+ M  
Sbjct: 294 NIMIDRLCKSKRVDEAMNLLREVLHKNMVPNTVTYSSLIDGFCKLGRITSALDLLKEMYH 353

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D +TY  ++  LCK   +  A AL  +M   G +P+  TY  ++  +   G+ K 
Sbjct: 354 RGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPNKYTYTALIDGLCKGGRHKN 413

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   ++  L KGC   + TY ++I  +CK+  +  A+ +   M   GC PD VT+  ++ 
Sbjct: 414 AQKLFQHLLVKGCRINVWTYNVMISGLCKEGMLDEALAMKSKMEENGCIPDAVTFEIIIR 473

Query: 301 FSCKQGKYDDAVLVINNLLSRGM 323
              ++ + D A  +++ ++++ +
Sbjct: 474 SLFEKDQNDKAEKLLHEMIAKDL 496


>gi|32527604|gb|AAP86199.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 686

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 241/509 (47%), Gaps = 55/509 (10%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L   C   ++++A  L   + R    PD      L+ GL R  R+ +A  +L
Sbjct: 150 DVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALL 205

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFD 234
             MV +G  PD ITY   V G+CK G   SA+ LL +M  +S  +P+V+ Y+ I+  +  
Sbjct: 206 DRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCK 265

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G+   +   + +   KG  P ++TY  +I   C     + A  +L +M     SP++VT
Sbjct: 266 DGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVT 325

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N   K+GK+ +A  + + +L RG+ PN+ITYN+++     +   DA + +  +M 
Sbjct: 326 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385

Query: 355 EASHSPTVFT-----------------------------------YNILINGLCKYGLVD 379
               SP VFT                                   YN LI+G C  G ++
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 445

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-------------HLLNGS 426
            A++   QM+S    PDIVT NT+L  LC  G L +AL++              H  NG 
Sbjct: 446 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG- 504

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P ++TYN LI GL  +G   +A  LY +M   GI PD IT+ ++I G C+  +++EA
Sbjct: 505 -VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             +   +G +        +  +I+G CK+ +VD  +++   M       D  ++ T++  
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 547 VADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
               G    A  ++Q++I   V+    T+
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITI 652



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 138/473 (29%), Positives = 227/473 (47%), Gaps = 48/473 (10%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKA 171
           ++ D+ T    +   C  G    A  L+  M   + I P+      +I GL +  R   +
Sbjct: 213 LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDS 272

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M   G  P+ +TYN M+GG C  G+  +A  LL EM      P+V+TYN ++  
Sbjct: 273 HNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               GKF +A   + + L +G  P  ITY  +I+  CKQ  +  A ++   MA +GCSPD
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS--------------- 336
           + T+ +L++  C   + DD + +++ +  RG+  N++TYNTL+H                
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452

Query: 337 --LGSRGCWDAVD------------KILDIMN------------EASH-----SPTVFTY 365
             + S  C D V             K+ D +             +ASH      P V TY
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           NILI GL   G    A   + +M  +   PD +TY++++  LCK+  L+EA Q+   +  
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
            S SP ++T+NTLI+G  K G ++  + L+ +M   GI  D I + TLI+GF +   +  
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE-LMISSRYKPDD 537
           A+D+ +E+   G        R ++ G    ++++ A+ +LE L +S  Y+ +D
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQMSVGYQLED 685



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 221/485 (45%), Gaps = 51/485 (10%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ FCS  KL  A      + +    PD      L+ GL    R+ +A  +   +    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +T+  ++ GLC+ G++  A+ALLD M  +G +PD ITY T +  M   G    A+
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 243 GFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +         P ++ Y+ +I+ +CK    + +  +  +M  +G  P+IVTYN ++  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G++  A  ++  +L R + PN +TYN L+++    G +    ++ D M      P 
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI------------------------ 397
             TYN +I+G CK   +D A + F  M +K C PD+                        
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 398 -----------VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
                      VTYNT++   C  G LN AL L   +  S   P ++T NTL+DGL   G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 447 CMEKAMVLYGQMME-----------NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
            ++ A+ ++  M +           NG+ PD +T+  LI G     +  EA +L +E+  
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           RG       Y  +I GLCK  ++D A Q+   M S  + P+   F+T++      G  ++
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597

Query: 556 AYKLW 560
             +L+
Sbjct: 598 GLELF 602



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/442 (27%), Positives = 218/442 (49%), Gaps = 15/442 (3%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L DA  L   M R   +P       L+  ++R++R +    + Q M       D  ++ +
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFNKLMGAVVRMERPDLVISLYQKMERKQIRCDIYSFTI 121

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++   C   ++  A++   +++  G  PDV+T+ T+L  +  + +  +A+    D   + 
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL----DLFHQI 177

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
           C P ++T+T L+  +C++  +  A+ +LD M   G  PD +TY + V+  CK G   D V
Sbjct: 178 CRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG---DTV 234

Query: 313 LVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             +N  L R ME      PN + Y+ ++  L   G       +   M +    P + TYN
Sbjct: 235 SALN--LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYN 292

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +I G C  G    A     +M+ +   P++VTYN ++ A  KEG   EA +L   +   
Sbjct: 293 CMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPR 352

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P  ITYN++IDG  K+  ++ A  ++  M   G SPD  T  TLI G+C A ++++ 
Sbjct: 353 GIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDG 412

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           ++LL E+ +RG       Y  +IHG C    ++ A+ + + MISS   PD    +T++  
Sbjct: 413 MELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDG 472

Query: 547 VADDGMTEEAYKLWQKLIEWKV 568
           + D+G  ++A ++++ + + K+
Sbjct: 473 LCDNGKLKDALEMFKAMQKSKM 494



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/400 (28%), Positives = 201/400 (50%), Gaps = 18/400 (4%)

Query: 112 FVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           F+E  +K       T N ++  FC  G+ + A +L+  M  R   P+      LI   ++
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             +  +A+++   M+  G +P+TITYN M+ G CK+ ++ +A  +   M+  GC PDV T
Sbjct: 336 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           + T++       +    +    +  R+G     +TY  LI   C    +  A+++   M 
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS-----------RGMEPNSITYNTL 333
             G  PDIVT N+L++  C  GK  DA+ +   +              G+EP+ +TYN L
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L + G +   +++ + M      P   TY+ +I+GLCK   +D A   F  M SK+ 
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF 575

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P++VT+NT++   CK G +++ L+L   +         I Y TLI G  K G +  A+ 
Sbjct: 576 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALD 635

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           ++ +M+ +G+ PD IT R ++ GF   +++E AV +L+++
Sbjct: 636 IFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL 675


>gi|83744086|gb|ABC42329.1| PPR protein [Oryza sativa Indica Group]
          Length = 761

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 145/495 (29%), Positives = 240/495 (48%), Gaps = 12/495 (2%)

Query: 77  EWSSESHVLAVNKKLRGLTITKKSHDP-SLP----SSDGPFVENDEKTNNKILQNFCSRG 131
           E S    V +    L+GL    +S +   LP       G     D  +   ++  F   G
Sbjct: 151 ELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEG 210

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
               A      M  R   PD     ++I  L +   ++KA +VL  MV +G +P+  TY 
Sbjct: 211 DSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYT 270

Query: 192 MMVGGLCKRGQIRSAIALL-----DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            ++ G C  GQ + AI  L     D +   G EPD+ TY T+L+     G          
Sbjct: 271 SIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLD 330

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             +R G  P    Y ILI    KQ  +  A+ V   M  +G +PD VTY +++   CK G
Sbjct: 331 LMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSG 390

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK-ILDIMNEASHSPTVFTY 365
           + +DA+L    ++  G+ P +I YN+L+H L +   W+  ++ IL++++      T+F +
Sbjct: 391 RVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIF-F 449

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N +I+  CK G V  +   F+ MV    +PDI+TY+T++   C  G ++EA++LL  +  
Sbjct: 450 NSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVS 509

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P  +TY TLI+G  K   M  A+VL+ +M  +G+SPD IT+  ++ G  +  +   
Sbjct: 510 VGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAA 569

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A +L   I + G ++  S Y +++HGLCK+K  D A+++ + +     K +   F+ ++ 
Sbjct: 570 AKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMID 629

Query: 546 KVADDGMTEEAYKLW 560
            +   G   EA  L+
Sbjct: 630 ALLKVGRNGEAKDLF 644



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 216/452 (47%), Gaps = 44/452 (9%)

Query: 158 LIRGLIRIDRIEKASK-VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-- 214
           L++GL    R   A   VL+ M     +PD  +  +++ GLC   + + A+ L   M+  
Sbjct: 128 LLKGLCADKRTSDAMDIVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADG 187

Query: 215 -VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              G  PDV++Y T++   F  G   +A   + + L +   P ++TY+ +I  +CK   +
Sbjct: 188 RGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAM 247

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI----- 328
            +A+EVL  M   G  P+  TY S+++  C  G+  +A+  +  + S G+EP+ +     
Sbjct: 248 DKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIA 307

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TY TLL    ++G    +  +LD+M      P  + YNILI    K G VD A+  F++M
Sbjct: 308 TYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKM 367

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA----- 443
             +   PD VTY  V+G LCK G + +A+     +     SP  I YN+LI GL      
Sbjct: 368 RQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKW 427

Query: 444 ------------------------------KKGCMEKAMVLYGQMMENGISPDDITHRTL 473
                                         K+G + ++  L+  M+  G+ PD IT+ TL
Sbjct: 428 ERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTL 487

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G+C A +++EA+ LL  +   G K     YR +I+G CK  ++  A+ + + M SS  
Sbjct: 488 IDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGV 547

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            PD   ++ I++ +     T  A +L+ ++ E
Sbjct: 548 SPDIITYNIILQGLFQTRRTAAAKELYVRITE 579



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 124/450 (27%), Positives = 226/450 (50%), Gaps = 10/450 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARR---NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           +L+  C   +  +A +L  +MA        PD      +I G  +     KA      M+
Sbjct: 164 LLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGDSGKAYSTYHEML 223

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
                PD +TY+ ++  LCK   +  A+ +L  M  +G  P+  TY +I+     +G+ K
Sbjct: 224 DRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTSIMHGYCSSGQPK 283

Query: 240 QAIGFWKDQLRK------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +AIGF K ++R       G  P + TY  L++    +  +     +LD M   G  PD  
Sbjct: 284 EAIGFLK-KVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPDHY 342

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            YN L+    KQGK D+A+LV + +  +G+ P+++TY  ++  L   G  +      + M
Sbjct: 343 VYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQM 402

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +   SP    YN LI+GLC     +RA     +M+ +    + + +N+++ + CKEG +
Sbjct: 403 IDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRV 462

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            E+ +L  L+      P +ITY+TLIDG    G M++AM L   M+  G+ P+ +T+RTL
Sbjct: 463 IESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTL 522

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G+C+  ++ +A+ L KE+   G       Y +++ GL ++++   A ++   +  S  
Sbjct: 523 INGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGT 582

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + + + ++ I+  +  + +T++A +++Q L
Sbjct: 583 QIELSTYNIILHGLCKNKLTDDALRMFQNL 612



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 114/424 (26%), Positives = 203/424 (47%), Gaps = 9/424 (2%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P  H    LI    R DR++     L  +V  G   + IT+  ++ GLC   +   A+ +
Sbjct: 85  PTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDI 144

Query: 210 -LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF---WKDQLRKGCPPYLITYTILIE 265
            L  M+   C PDV +   +L+ + D  + ++A+       D    G  P +++YT +I 
Sbjct: 145 VLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVIN 204

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
              K+    +A     +M     SPD+VTY+S++   CK    D A+ V+ +++  G+ P
Sbjct: 205 GFFKEGDSGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMP 264

Query: 326 NSITYNTLLHSLGSRG-CWDAVDKILDIMNEASH----SPTVFTYNILINGLCKYGLVDR 380
           N  TY +++H   S G   +A+  +  + ++        P + TY  L+ G    G +  
Sbjct: 265 NCRTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVG 324

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                + MV     PD   YN ++ A  K+G ++EA+ +   +     +P  +TY  +I 
Sbjct: 325 MHALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIG 384

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
            L K G +E AM+ + QM++ G+SP +I + +LI G C  ++ E A +L+ E+  RG  +
Sbjct: 385 ILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICL 444

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               +  +I   CK  +V  + ++ +LM+    KPD   +ST++      G  +EA KL 
Sbjct: 445 NTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLL 504

Query: 561 QKLI 564
             ++
Sbjct: 505 SGMV 508



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/456 (24%), Positives = 215/456 (47%), Gaps = 7/456 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           +E D  T   +LQ + ++G L     L+D+M R    PD H+  N LI    +  ++++A
Sbjct: 302 LEPDIATYCTLLQGYATKGALVGMHALLDLMVRNGIHPD-HYVYNILICAYAKQGKVDEA 360

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             V   M   G  PD +TY  ++G LCK G++  A+   ++M   G  P  I YN+++  
Sbjct: 361 MLVFSKMRQQGLNPDAVTYGAVIGILCKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHG 420

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +    K+++A     + L +G     I +  +I+  CK+  +  + ++ D M   G  PD
Sbjct: 421 LCTCNKWERAEELILEMLDRGICLNTIFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPD 480

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           I+TY++L++  C  GK D+A+ +++ ++S G++PN++TY TL++             +  
Sbjct: 481 IITYSTLIDGYCLAGKMDEAMKLLSGMVSVGLKPNTVTYRTLINGYCKISRMGDALVLFK 540

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M  +  SP + TYNI++ GL +      A   + ++     Q ++ TYN +L  LCK  
Sbjct: 541 EMESSGVSPDIITYNIILQGLFQTRRTAAAKELYVRITESGTQIELSTYNIILHGLCKNK 600

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           + ++AL++   L          T+N +ID L K G   +A  L+     NG+ P+  T+R
Sbjct: 601 LTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYR 660

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            +         +EE   L   +   G  + +     ++  L +  ++  A   L ++   
Sbjct: 661 LMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEK 720

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
            +  + +  S  +     D ++   Y+ + + +  K
Sbjct: 721 HFSLEASTASLFI-----DLLSGGKYQEYHRFLPEK 751



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 111/457 (24%), Positives = 204/457 (44%), Gaps = 6/457 (1%)

Query: 118 KTNNKILQNFCSRGKLTDASKLI-----DIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +T   I+  +CS G+  +A   +     D +      PD      L++G      +    
Sbjct: 267 RTYTSIMHGYCSSGQPKEAIGFLKKVRSDGVEPDGLEPDIATYCTLLQGYATKGALVGMH 326

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L +MV +G  PD   YN+++    K+G++  A+ +  +M   G  PD +TY  ++  +
Sbjct: 327 ALLDLMVRNGIHPDHYVYNILICAYAKQGKVDEAMLVFSKMRQQGLNPDAVTYGAVIGIL 386

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G+ + A+ +++  + +G  P  I Y  LI  +C      RA E++ +M   G   + 
Sbjct: 387 CKSGRVEDAMLYFEQMIDEGLSPGNIVYNSLIHGLCTCNKWERAEELILEMLDRGICLNT 446

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + +NS+++  CK+G+  ++  + + ++  G++P+ ITY+TL+      G  D   K+L  
Sbjct: 447 IFFNSIIDSHCKEGRVIESEKLFDLMVRIGVKPDIITYSTLIDGYCLAGKMDEAMKLLSG 506

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P   TY  LING CK   +  A+  F +M S    PDI+TYN +L  L +   
Sbjct: 507 MVSVGLKPNTVTYRTLINGYCKISRMGDALVLFKEMESSGVSPDIITYNIILQGLFQTRR 566

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
              A +L   +  S     L TYN ++ GL K    + A+ ++  +    +  +  T   
Sbjct: 567 TAAAKELYVRITESGTQIELSTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNI 626

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I    +  +  EA DL       G       YRL+   +     ++   Q+   M  + 
Sbjct: 627 MIDALLKVGRNGEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNG 686

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
              D  + + IV+++   G    A   +  +I+ K F
Sbjct: 687 CTVDSGMLNFIVRELLQRGEITRA-GTYLSMIDEKHF 722



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/269 (25%), Positives = 116/269 (43%), Gaps = 41/269 (15%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH--SPTVFTYN 366
           +DA  V + LL RG   +    N  L  +       AV +   +    +   +PTV TY 
Sbjct: 32  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 91

Query: 367 ILINGLCKYGLVDRAINSFNQMVSK----------------------------------- 391
           ILI   C+   +D    +   +V K                                   
Sbjct: 92  ILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMDIVLRRMTE 151

Query: 392 -NCQPDIVTYNTVLGALCKEGMLNEALQLLHLL---NGSSCSPCLITYNTLIDGLAKKGC 447
            +C PD+ +   +L  LC E    EAL+L H++    G   +P +++Y T+I+G  K+G 
Sbjct: 152 LSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVINGFFKEGD 211

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
             KA   Y +M++  ISPD +T+ ++I   C+   +++A+++L  + K G       Y  
Sbjct: 212 SGKAYSTYHEMLDRRISPDVVTYSSIIAALCKGQAMDKAMEVLTSMVKNGVMPNCRTYTS 271

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           ++HG C S +   AI  L+ + S   +PD
Sbjct: 272 IMHGYCSSGQPKEAIGFLKKVRSDGVEPD 300



 Score = 42.7 bits (99), Expect = 0.54,   Method: Compositional matrix adjust.
 Identities = 27/144 (18%), Positives = 67/144 (46%), Gaps = 4/144 (2%)

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P + TY  LI    +   ++      G +++ G   + IT   L+ G C   +  +A+D
Sbjct: 84  TPTVHTYAILIGCCCRADRLDLGFAALGNVVKKGFRVEAITFTPLLKGLCADKRTSDAMD 143

Query: 489 L-LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR---YKPDDTVFSTIV 544
           + L+ + +        +  +++ GLC   +   A+++  +M   R     PD   ++T++
Sbjct: 144 IVLRRMTELSCMPDVFSCTILLKGLCDENRSQEALELPHMMADGRGGGSAPDVVSYTTVI 203

Query: 545 KKVADDGMTEEAYKLWQKLIEWKV 568
                +G + +AY  + ++++ ++
Sbjct: 204 NGFFKEGDSGKAYSTYHEMLDRRI 227


>gi|255541015|ref|XP_002511572.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550687|gb|EEF52174.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 735

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 134/441 (30%), Positives = 231/441 (52%), Gaps = 12/441 (2%)

Query: 119 TNNKILQNFCSRG-------KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           T N  +Q  C +G       K+ +A   +  M  +   PD      +I G  ++ +I+ A
Sbjct: 253 TFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDA 312

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           S++L+     G VPD  TY  ++ G+C+ G I  A+AL +E    G +P ++ YNT+++ 
Sbjct: 313 SRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKG 372

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   G   +A+    D  ++G  P + TY ++I  +CK   ++ A  +L+    +G  PD
Sbjct: 373 LSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPD 432

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           I T+N+L++  CK+ K D+A+ +++++ S G+ P+ ITYN++L+ L      + V +   
Sbjct: 433 IFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFK 492

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           ++ E    P + TYNILI  LCK   V  A++   ++ ++   PD V++ TV+   C  G
Sbjct: 493 MIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNG 552

Query: 412 MLNEALQLLHLLNGS-SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
            L+EA QL   +         + TYN +I+  ++K  M+ A  L+ +M + G  PD  T+
Sbjct: 553 DLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCDPDSYTY 612

Query: 471 RTLIWGFCRADQVEEAVD-LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           R +I GFC+   V    D LLKEI + G     + +  VI+ LC   +V  A+ ++ LM+
Sbjct: 613 RVMIDGFCKVGNVNSGYDFLLKEI-EIGFVPSLTTFGRVINCLCVQHRVHEAVGIVHLMV 671

Query: 530 SSRYKPDD--TVFSTIVKKVA 548
            +   P+   T+F    K VA
Sbjct: 672 RTGVVPEAVVTIFDADKKAVA 692



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 236/482 (48%), Gaps = 42/482 (8%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           ++N+  +GK+ +A  + + M   N  P       ++  L+      +A KV   M   G 
Sbjct: 83  MRNYGRKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGI 142

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            PD  T+ + +   C+  +  +A+ LL+ M   GCE + + Y T++   ++     +A  
Sbjct: 143 APDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYE 202

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +   LR G  P++ T+  L+  +CK+  +    ++L+ +   G  P++ T+N  +   C
Sbjct: 203 LFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLC 262

Query: 304 KQG-------KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG--------------- 341
           ++G       K  +A   ++ ++++G+EP+  TYNT+++     G               
Sbjct: 263 RKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFK 322

Query: 342 ----------------CWDA-VDKILDIMNEA---SHSPTVFTYNILINGLCKYGLVDRA 381
                           C D  +D  L +  EA      P++  YN LI GL + GLV +A
Sbjct: 323 GFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKA 382

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +   N M  +   PDI TYN V+  LCK G +++A  LL+        P + T+NTLIDG
Sbjct: 383 LQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDG 442

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K+  M+ A+ +   M  +G++PD IT+ +++ G C+A + E+ ++  K I ++G    
Sbjct: 443 YCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPN 502

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y ++I  LCK++KV  A+ +LE + +    PD   F T++    ++G  +EAY+L++
Sbjct: 503 IITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVISGFCNNGDLDEAYQLFR 562

Query: 562 KL 563
           ++
Sbjct: 563 RM 564



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/461 (27%), Positives = 217/461 (47%), Gaps = 8/461 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F       +A +L + M R    P       L+  L +   +++  K+L  ++ +G
Sbjct: 187 VISGFYEENYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNG 246

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIA-------LLDEMSVSGCEPDVITYNTILRTMFDN 235
             P+  T+N+ + GLC++G +  A +        L +M   G EPD  TYNTI+      
Sbjct: 247 VCPNLFTFNIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKV 306

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK + A    KD   KG  P   TY  LI  VC+   I  A+ + ++   +G  P IV Y
Sbjct: 307 GKIQDASRILKDAKFKGFVPDEFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLY 366

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+    +QG    A+ ++N++   GM P+  TYN +++ L   GC    + +L+    
Sbjct: 367 NTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIA 426

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             + P +FT+N LI+G CK   +D AI   + M S    PD++TYN++L  LCK     +
Sbjct: 427 KGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPED 486

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            ++   ++    C P +ITYN LI+ L K   + +A+ L  ++   G+ PD ++  T+I 
Sbjct: 487 VMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLEEIRNRGLIPDPVSFGTVIS 546

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
           GFC    ++EA  L + + ++       A Y ++I+   +   +DMA ++   M      
Sbjct: 547 GFCNNGDLDEAYQLFRRMEQQYRICHTVATYNIMINAFSEKLDMDMAQKLFHEMGDKGCD 606

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           PD   +  ++      G     Y    K IE       TT 
Sbjct: 607 PDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLTTF 647



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 109/409 (26%), Positives = 201/409 (49%), Gaps = 42/409 (10%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           ++G+++ A+ + + M    CEP + +YN I+  + + G F QA   +     +G  P + 
Sbjct: 88  RKGKVQEAVDVFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVYLRMKHEGIAPDVC 147

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T+TI I+  C+      A+ +L++M  +GC  + V Y ++++   ++    +A  + N +
Sbjct: 148 TFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEENYQVEAYELFNKM 207

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L  G+ P+  T+N L+H L  +G     +K+L+ + +    P +FT+NI I GLC+ G++
Sbjct: 208 LRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTFNIFIQGLCRKGVL 267

Query: 379 D-------RAINSFNQMVSKNCQPDIVTYNTVLGA------------------------- 406
           +        A N  ++MV+K  +PD  TYNT++                           
Sbjct: 268 EGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPD 327

Query: 407 ----------LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
                     +C++G ++ AL L     G    P ++ YNTLI GL+++G + KA+ L  
Sbjct: 328 EFTYCSLIIGVCQDGDIDHALALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMN 387

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M + G+SPD  T+  +I G C+   V +A +LL     +G       +  +I G CK  
Sbjct: 388 DMSKEGMSPDIWTYNLVINGLCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRL 447

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K+D AI +L+ M S    PD   +++I+  +      E+  + ++ ++E
Sbjct: 448 KMDNAIGILDSMWSHGVTPDVITYNSILNGLCKAAKPEDVMETFKMIME 496



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/389 (29%), Positives = 196/389 (50%), Gaps = 7/389 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKA 171
           +E D+ T N I+  +   GK+ DAS+++     +  +PD F +C +LI G+ +   I+ A
Sbjct: 289 LEPDDFTYNTIIYGYSKVGKIQDASRILKDAKFKGFVPDEFTYC-SLIIGVCQDGDIDHA 347

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             + +  +  G  P  + YN ++ GL ++G +  A+ L+++MS  G  PD+ TYN ++  
Sbjct: 348 LALFEEALGKGLKPSIVLYNTLIKGLSQQGLVLKALQLMNDMSKEGMSPDIWTYNLVING 407

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   G    A       + KG  P + T+  LI+  CK+  +  AI +LD M   G +PD
Sbjct: 408 LCKMGCVSDANNLLNAAIAKGYLPDIFTFNTLIDGYCKRLKMDNAIGILDSMWSHGVTPD 467

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKIL 350
           ++TYNS++N  CK  K +D +     ++ +G  PN ITYN L+ SL  +R   +A+D + 
Sbjct: 468 VITYNSILNGLCKAAKPEDVMETFKMIMEKGCLPNIITYNILIESLCKARKVTEALDLLE 527

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN--CQPDIVTYNTVLGALC 408
           +I N     P   ++  +I+G C  G +D A   F +M  +   C   + TYN ++ A  
Sbjct: 528 EIRNRGL-IPDPVSFGTVISGFCNNGDLDEAYQLFRRMEQQYRICHT-VATYNIMINAFS 585

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           ++  ++ A +L H +    C P   TY  +IDG  K G +        + +E G  P   
Sbjct: 586 EKLDMDMAQKLFHEMGDKGCDPDSYTYRVMIDGFCKVGNVNSGYDFLLKEIEIGFVPSLT 645

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           T   +I   C   +V EAV ++  + + G
Sbjct: 646 TFGRVINCLCVQHRVHEAVGIVHLMVRTG 674



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 71/303 (23%), Positives = 143/303 (47%), Gaps = 23/303 (7%)

Query: 275 RAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYD-------DAVLVINNLLSRGMEPN 326
           +A+ + + +  E G     +TY  ++      G++D       +  L ++N L  G+   
Sbjct: 22  KALSIFNSVKKEDGFKHTFLTYKRMIEKLGFHGEFDAMERVLMEMRLNVDNSLLEGV--- 78

Query: 327 SITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
              Y + + + G +G   +AVD + + M+  +  P++F+YN ++N L +YG  ++A   +
Sbjct: 79  ---YVSAMRNYGRKGKVQEAVD-VFERMDFYNCEPSIFSYNAIMNILVEYGYFNQAHKVY 134

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            +M  +   PD+ T+   + + C+      AL+LL+ +    C    + Y T+I G  ++
Sbjct: 135 LRMKHEGIAPDVCTFTIRIKSFCRTKRPLAALRLLNNMPSQGCELNAVVYCTVISGFYEE 194

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
               +A  L+ +M+  GI P   T   L+   C+   ++E   LL ++ K G       +
Sbjct: 195 NYQVEAYELFNKMLRLGIFPHIATFNKLMHILCKKGHLQEGEKLLNKVLKNGVCPNLFTF 254

Query: 506 RLVIHGLCK-------SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
            + I GLC+       + KV  A   L  M++   +PDD  ++TI+   +  G  ++A +
Sbjct: 255 NIFIQGLCRKGVLEGANSKVVEAENYLHKMVNKGLEPDDFTYNTIIYGYSKVGKIQDASR 314

Query: 559 LWQ 561
           + +
Sbjct: 315 ILK 317


>gi|449529622|ref|XP_004171797.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 618

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 228/451 (50%), Gaps = 6/451 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N++L         +    L + M      PD      L   L  ++R+ +A   +  ++ 
Sbjct: 95  NRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAAMAGILR 154

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +P+ +TY  ++ GLC   +I  A  L   M   GC P+ +TY T+++ +   G    
Sbjct: 155 RGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNI 214

Query: 241 AIGFWKDQLRKG------CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           A+   K+ L         C P +ITY+I+I+ +CK      A E+ ++M  +G  PD+++
Sbjct: 215 ALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVIS 274

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y++L++  C  GK+D +  + + ++ +G++P+ +T++ L+ +L   G      K+L++M 
Sbjct: 275 YSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMI 334

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P + TYN LI+G C  G ++ A   F  M SK  +PD ++Y T++   CK   + 
Sbjct: 335 QRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYCKTWKVK 394

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA+ L + +     SP + TY TL+ GL +KG +  A  L+G M   G+S +   +   +
Sbjct: 395 EAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFL 454

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+ D + EA++L  E+     K+    Y  +I GLCK+ K++ A ++ E +     +
Sbjct: 455 DGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQ 514

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   ++ ++      G  + A  L++K+ E
Sbjct: 515 PDVVTYNIMIHGFCKVGQVDNANILFEKMEE 545



 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 233/453 (51%), Gaps = 7/453 (1%)

Query: 123 ILQN-FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           IL N  C+  ++++A   +  + RR  IP+      LI+GL    RI +A+++   M   
Sbjct: 131 ILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKL 190

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEM----SVSG--CEPDVITYNTILRTMFDN 235
           G  P+ +TY  ++ GLC+ G +  A+ L  EM    S  G  C+P VITY+ I+  +   
Sbjct: 191 GCTPNAVTYGTLIKGLCQTGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKV 250

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A   +++   +G  P +I+Y+ LI   C      ++  + D+M  +G  PD+VT+
Sbjct: 251 GREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTF 310

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L++  CK+GK  +A  ++  ++ RG+ PN ITYN+L+      G  ++  ++   M  
Sbjct: 311 SVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPS 370

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   +Y  LING CK   V  A+N +N+M+     P++ TY T+L  L ++G + +
Sbjct: 371 KGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGD 430

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L  ++     S     Y   +DGL K  C+ +AM L+ ++       +   +  LI 
Sbjct: 431 AKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLID 490

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+A ++E A +L +++ + G +     Y ++IHG CK  +VD A  + E M  +   P
Sbjct: 491 GLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTP 550

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           D   ++T++    +    EE  KL  K+++  V
Sbjct: 551 DIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDV 583



 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 117/376 (31%), Positives = 200/376 (53%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I GL ++ R ++A ++ + M   G +PD I+Y+ ++ G C  G+   +  L DEM   G
Sbjct: 243 IIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQG 302

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +PD++T++ ++ T+   GK  +A    +  +++G  P LITY  LI+  C    +  A 
Sbjct: 303 VQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAR 362

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E+   M  +G  PD ++Y +L+N  CK  K  +A+ + N +L  G  PN  TY TLL  L
Sbjct: 363 ELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGL 422

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             +G      K+  +M     S     Y I ++GLCK   +  A+  FN++ S N + +I
Sbjct: 423 FQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNI 482

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
             Y+ ++  LCK G L  A +L   L+     P ++TYN +I G  K G ++ A +L+ +
Sbjct: 483 ENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEK 542

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M ENG +PD I + TL+ GFC  +++EE + LL ++ ++      ++  +V+  LCK +K
Sbjct: 543 MEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEK 602

Query: 518 VDMAIQVLELMISSRY 533
               + +L      R+
Sbjct: 603 YKKFVDLLPKFPVQRH 618



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 243/480 (50%), Gaps = 17/480 (3%)

Query: 97  TKKSHDPS--LPSSDGPFVENDEKTNNKILQNF---CSRGKLT--DASKLIDIMARRNQI 149
           T  +H P+  LP++       +E + +  L  F   C  G +T   A    D+M R + I
Sbjct: 33  TSSTHHPNPILPAA----FNREEISFHHPLSLFLRNCKTGNITAIQAFHFFDLMMRSHPI 88

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P       L+ GL +I+   +   +   M ++G  PD  T +++   LC   ++  A+A 
Sbjct: 89  PPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSPDLFTLSILANCLCNVNRVSEALAA 148

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           +  +   G  P+V+TY T+++ +    +  +A   +    + GC P  +TY  LI+ +C+
Sbjct: 149 MAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQ 208

Query: 270 QCGIARAI----EVLDDMAIEG--CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
              +  A+    E+L+D +  G  C P ++TY+ +++  CK G+ D+A  +   + ++GM
Sbjct: 209 TGNVNIALKLHKEMLNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGM 268

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ I+Y+TL+H     G WD    + D M +    P + T+++LI+ LCK G V  A  
Sbjct: 269 IPDVISYSTLIHGFCCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKK 328

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               M+ +   P+++TYN+++   C  G LN A +L   +      P  I+Y TLI+G  
Sbjct: 329 LLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLINGYC 388

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K   +++AM LY +M++ G SP+  T+ TL+ G  +  +V +A  L   +   G    + 
Sbjct: 389 KTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQ 448

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y + + GLCK+  +  A+++   + S  +K +   +S ++  +   G  E A++L++KL
Sbjct: 449 IYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKL 508



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/455 (29%), Positives = 236/455 (51%), Gaps = 16/455 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++  C   ++++A++L   M +    P+      LI+GL +   +  A K+ + M
Sbjct: 163 TYTTLIKGLCMEHRISEATRLFLRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEM 222

Query: 179 VMSG---GV---PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +      GV   P  ITY++++ GLCK G+   A  L +EM   G  PDVI+Y+T++   
Sbjct: 223 LNDASQYGVNCKPGVITYSIIIDGLCKVGREDEAKELFEEMKAQGMIPDVISYSTLIHGF 282

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK+ Q+   + + + +G  P ++T+++LI+ +CK+  +  A ++L+ M   G  P++
Sbjct: 283 CCAGKWDQSKHLFDEMVDQGVQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNL 342

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TYNSL++  C  G  + A  +  ++ S+G+EP+ I+Y TL++  G    W  V + +++
Sbjct: 343 ITYNSLIDGFCMVGDLNSARELFLSMPSKGLEPDEISYTTLIN--GYCKTWK-VKEAMNL 399

Query: 353 MNE---ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            NE      SP V TY  L+ GL + G V  A   F  M +     +   Y   L  LCK
Sbjct: 400 YNEMLQVGKSPNVTTYGTLLKGLFQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCK 459

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              L EA++L + L   +    +  Y+ LIDGL K G +E A  L+ ++ + G+ PD +T
Sbjct: 460 NDCLFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVT 519

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  +I GFC+  QV+ A  L +++ + G      AY  ++ G C+  K++  I++L  M+
Sbjct: 520 YNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMV 579

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                P+    + +V  +  D    E YK +  L+
Sbjct: 580 QKDVSPNAASCTIVVDMLCKD----EKYKKFVDLL 610



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 153/308 (49%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T + ++   C  GK+T+A KL+++M +R  +P+     +LI G   +  +  A 
Sbjct: 303 VQPDMVTFSVLIDTLCKEGKVTEAKKLLEVMIQRGIVPNLITYNSLIDGFCMVGDLNSAR 362

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M   G  PD I+Y  ++ G CK  +++ A+ L +EM   G  P+V TY T+L+ +
Sbjct: 363 ELFLSMPSKGLEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGL 422

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F  GK   A   +      G       Y I ++ +CK   +  A+E+ +++       +I
Sbjct: 423 FQKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNI 482

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y+ L++  CK GK + A  +   L   G++P+ +TYN ++H     G  D  + + + 
Sbjct: 483 ENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEK 542

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E   +P +  YN L+ G C+   ++  I   ++MV K+  P+  +   V+  LCK+  
Sbjct: 543 MEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAASCTIVVDMLCKDEK 602

Query: 413 LNEALQLL 420
             + + LL
Sbjct: 603 YKKFVDLL 610



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/226 (23%), Positives = 115/226 (50%), Gaps = 3/226 (1%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           S+PS     +E DE +   ++  +C   K+ +A  L + M +  + P+      L++GL 
Sbjct: 367 SMPSKG---LEPDEISYTTLINGYCKTWKVKEAMNLYNEMLQVGKSPNVTTYGTLLKGLF 423

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           +  ++  A K+  +M   G   ++  Y + + GLCK   +  A+ L +E+     + ++ 
Sbjct: 424 QKGKVGDAKKLFGVMKTYGVSANSQIYGIFLDGLCKNDCLFEAMELFNELKSYNFKLNIE 483

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
            Y+ ++  +   GK + A   ++   ++G  P ++TY I+I   CK   +  A  + + M
Sbjct: 484 NYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNIMIHGFCKVGQVDNANILFEKM 543

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              GC+PDI+ YN+L+   C+  K ++ + +++ ++ + + PN+ +
Sbjct: 544 EENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKDVSPNAAS 589



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 83/154 (53%), Gaps = 6/154 (3%)

Query: 139 LIDIMARRNQIPDFHFCIN------LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L + M   N++  ++F +N      LI GL +  ++E A ++ + +   G  PD +TYN+
Sbjct: 463 LFEAMELFNELKSYNFKLNIENYSCLIDGLCKAGKLETAWELFEKLSQEGLQPDVVTYNI 522

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           M+ G CK GQ+ +A  L ++M  +GC PD+I YNT+L    +  K ++ I      ++K 
Sbjct: 523 MIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVIKLLHKMVQKD 582

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
             P   + TI+++ +CK     + +++L    ++
Sbjct: 583 VSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPVQ 616



 Score = 64.7 bits (156), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/159 (27%), Positives = 72/159 (45%), Gaps = 2/159 (1%)

Query: 408 CKEGMLN--EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           CK G +   +A     L+  S   P + ++N L+ GLAK     +   LY +M   G+SP
Sbjct: 65  CKTGNITAIQAFHFFDLMMRSHPIPPISSFNRLLGGLAKINHYSQLFSLYNEMRLAGLSP 124

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D  T   L    C  ++V EA+  +  I +RG       Y  +I GLC   ++  A ++ 
Sbjct: 125 DLFTLSILANCLCNVNRVSEALAAMAGILRRGYIPNVVTYTTLIKGLCMEHRISEATRLF 184

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             M      P+   + T++K +   G    A KL ++++
Sbjct: 185 LRMQKLGCTPNAVTYGTLIKGLCQTGNVNIALKLHKEML 223



 Score = 41.2 bits (95), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 26/103 (25%), Positives = 49/103 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  FC  G++ +A+ L + M      PD      L+ G    +++E+  
Sbjct: 513 LQPDVVTYNIMIHGFCKVGQVDNANILFEKMEENGCTPDIIAYNTLLCGFCEGNKLEEVI 572

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           K+L  MV     P+  +  ++V  LCK  + +  + LL +  V
Sbjct: 573 KLLHKMVQKDVSPNAASCTIVVDMLCKDEKYKKFVDLLPKFPV 615


>gi|15221282|ref|NP_172694.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122242333|sp|Q0WKV3.1|PPR36_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g12300, mitochondrial; Flags: Precursor
 gi|110741411|dbj|BAF02254.1| hypothetical protein [Arabidopsis thaliana]
 gi|332190743|gb|AEE28864.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 637

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/439 (28%), Positives = 226/439 (51%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           FC   KL  A   +  + +    P+      LI GL    R+ +A +++  MV  G  PD
Sbjct: 133 FCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPD 192

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            IT N +V GLC  G+   A+ L+D+M   GC+P+ +TY  +L  M  +G+   A+   +
Sbjct: 193 LITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLR 252

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
               +      + Y+I+I+ +CK   +  A  + ++M ++G + +I+TYN L+   C  G
Sbjct: 253 KMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAG 312

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           ++DD   ++ +++ R + PN +T++ L+ S    G     +++   M     +P   TY 
Sbjct: 313 RWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYT 372

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI+G CK   +D+A    + MVSK C P+I T+N ++   CK   +++ L+L   ++  
Sbjct: 373 SLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLR 432

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
                 +TYNTLI G  + G +  A  L+ +M+   + P+ +T++ L+ G C   + E+A
Sbjct: 433 GVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKA 492

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           +++ ++I K   ++    Y ++IHG+C + KVD A  +   +     KP    ++ ++  
Sbjct: 493 LEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGG 552

Query: 547 VADDGMTEEAYKLWQKLIE 565
           +   G   EA  L++K+ E
Sbjct: 553 LCKKGPLSEAELLFRKMEE 571



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 125/450 (27%), Positives = 223/450 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T + ++   C  G++++A +L+D M      PD      L+ GL    +  +A  
Sbjct: 155 EPNTITFSTLINGLCLEGRVSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAML 214

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  P+ +TY  ++  +CK GQ   A+ LL +M     + D + Y+ I+  + 
Sbjct: 215 LIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLC 274

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +G    A   + +   KG    +ITY ILI   C         ++L DM     +P++V
Sbjct: 275 KHGSLDNAFNLFNEMEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVV 334

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T++ L++   K+GK  +A  +   ++ RG+ P++ITY +L+         D  ++++D+M
Sbjct: 335 TFSVLIDSFVKEGKLREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLM 394

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P + T+NILING CK   +D  +  F +M  +    D VTYNT++   C+ G L
Sbjct: 395 VSKGCDPNIRTFNILINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 454

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           N A +L   +      P ++TY  L+DGL   G  EKA+ ++ ++ ++ +  D   +  +
Sbjct: 455 NVAKELFQEMVSRKVPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNII 514

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C A +V++A DL   +  +G K     Y ++I GLCK   +  A  +   M    +
Sbjct: 515 IHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGH 574

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            PD   ++ +++    DG   ++ KL ++L
Sbjct: 575 APDGWTYNILIRAHLGDGDATKSVKLIEEL 604



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 219/408 (53%), Gaps = 1/408 (0%)

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
           GL+ I + + A  + + M+ S  +P  I ++ +   + K  Q    +AL  +M + G   
Sbjct: 63  GLVDI-KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAH 121

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           ++ T + ++       K   A       ++ G  P  IT++ LI  +C +  ++ A+E++
Sbjct: 122 NLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELV 181

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           D M   G  PD++T N+LVN  C  GK  +A+L+I+ ++  G +PN++TY  +L+ +   
Sbjct: 182 DRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKS 241

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G      ++L  M E +       Y+I+I+GLCK+G +D A N FN+M  K    +I+TY
Sbjct: 242 GQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITY 301

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N ++G  C  G  ++  +LL  +     +P ++T++ LID   K+G + +A  L+ +M+ 
Sbjct: 302 NILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIH 361

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            GI+PD IT+ +LI GFC+ + +++A  ++  +  +G       + ++I+G CK+ ++D 
Sbjct: 362 RGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDD 421

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            +++   M       D   ++T+++   + G    A +L+Q+++  KV
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKV 469



 Score =  196 bits (498), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/395 (29%), Positives = 203/395 (51%), Gaps = 2/395 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   +L   C  G+   A +L+  M  RN ++    + I +I GL +   ++ A  +   
Sbjct: 230 TYGPVLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSI-IIDGLCKHGSLDNAFNLFNE 288

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M M G   + ITYN+++GG C  G+      LL +M      P+V+T++ ++ +    GK
Sbjct: 289 MEMKGITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGK 348

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A    K+ + +G  P  ITYT LI+  CK+  + +A +++D M  +GC P+I T+N 
Sbjct: 349 LREAEELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNI 408

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK  + DD + +   +  RG+  +++TYNTL+      G  +   ++   M    
Sbjct: 409 LINGYCKANRIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRK 468

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P + TY IL++GLC  G  ++A+  F ++     + DI  YN ++  +C    +++A 
Sbjct: 469 VPPNIVTYKILLDGLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAW 528

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            L   L      P + TYN +I GL KKG + +A +L+ +M E+G +PD  T+  LI   
Sbjct: 529 DLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAH 588

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
                  ++V L++E+ + G  +  S  ++VI  L
Sbjct: 589 LGDGDATKSVKLIEELKRCGFSVDASTIKMVIDML 623



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 108/437 (24%), Positives = 218/437 (49%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           K  DA  L   M     +P       L   + +  + +    + + M + G   +  T +
Sbjct: 68  KADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQMELKGIAHNLYTLS 127

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           +M+   C+  ++  A + + ++   G EP+ IT++T++  +   G+  +A+      +  
Sbjct: 128 IMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGRVSEALELVDRMVEM 187

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P LIT   L+  +C     A A+ ++D M   GC P+ VTY  ++N  CK G+   A
Sbjct: 188 GHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGPVLNVMCKSGQTALA 247

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + ++  +  R ++ +++ Y+ ++  L   G  D    + + M     +  + TYNILI G
Sbjct: 248 MELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKGITTNIITYNILIGG 307

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
            C  G  D        M+ +   P++VT++ ++ +  KEG L EA +L   +     +P 
Sbjct: 308 FCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAEELHKEMIHRGIAPD 367

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
            ITY +LIDG  K+  ++KA  +   M+  G  P+  T   LI G+C+A+++++ ++L +
Sbjct: 368 TITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELFR 427

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           ++  RG       Y  +I G C+  K+++A ++ + M+S +  P+   +  ++  + D+G
Sbjct: 428 KMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDNG 487

Query: 552 MTEEAYKLWQKLIEWKV 568
            +E+A ++++K+ + K+
Sbjct: 488 ESEKALEIFEKIEKSKM 504



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 177/376 (47%), Gaps = 35/376 (9%)

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           ++Y   LR+   + K   AI  ++D +     P +I ++ L   + K       + +   
Sbjct: 54  LSYRERLRSGLVDIKADDAIDLFRDMIHSRPLPTVIDFSRLFSAIAKTKQYDLVLALCKQ 113

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M ++G + ++ T + ++N  C+  K   A   +  ++  G EPN+IT++TL++ L   G 
Sbjct: 114 MELKGIAHNLYTLSIMINCFCRCRKLCLAFSAMGKIIKLGYEPNTITFSTLINGLCLEGR 173

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                +++D M E  H P + T N L+NGLC  G    A+   ++MV   CQP+ VTY  
Sbjct: 174 VSEALELVDRMVEMGHKPDLITINTLVNGLCLSGKEAEAMLLIDKMVEYGCQPNAVTYGP 233

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           VL  +CK G    A++LL  +   +     + Y+ +IDGL K G ++ A  L+ +M   G
Sbjct: 234 VLNVMCKSGQTALAMELLRKMEERNIKLDAVKYSIIIDGLCKHGSLDNAFNLFNEMEMKG 293

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG------------------NKMRNS- 503
           I+ + IT+  LI GFC A + ++   LL+++ KR                    K+R + 
Sbjct: 294 ITTNIITYNILIGGFCNAGRWDDGAKLLRDMIKRKINPNVVTFSVLIDSFVKEGKLREAE 353

Query: 504 ----------------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
                            Y  +I G CK   +D A Q+++LM+S    P+   F+ ++   
Sbjct: 354 ELHKEMIHRGIAPDTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGY 413

Query: 548 ADDGMTEEAYKLWQKL 563
                 ++  +L++K+
Sbjct: 414 CKANRIDDGLELFRKM 429



 Score =  109 bits (273), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 69/275 (25%), Positives = 130/275 (47%), Gaps = 4/275 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  FC    L  A++++D+M  +   P+      LI G  + +RI+   ++ 
Sbjct: 367 DTITYTSLIDGFCKENHLDKANQMVDLMVSKGCDPNIRTFNILINGYCKANRIDDGLELF 426

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M + G V DT+TYN ++ G C+ G++  A  L  EM      P+++TY  +L  + DN
Sbjct: 427 RKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLDGLCDN 486

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ ++A+  ++   +      +  Y I+I  +C    +  A ++   + ++G  P + TY
Sbjct: 487 GESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTY 546

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N ++   CK+G   +A L+   +   G  P+  TYN L+ +    G      K+++ +  
Sbjct: 547 NIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKR 606

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
              S    T  ++I+ L       R   SF  M+S
Sbjct: 607 CGFSVDASTIKMVIDMLSD----GRLKKSFLDMLS 637



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 64/262 (24%), Positives = 118/262 (45%), Gaps = 14/262 (5%)

Query: 76  DEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTD 135
           D +  E+H+   N+ +    +  K  DP++            +T N ++  +C   ++ D
Sbjct: 376 DGFCKENHLDKANQMVD--LMVSKGCDPNI------------RTFNILINGYCKANRIDD 421

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
             +L   M+ R  + D      LI+G   + ++  A ++ Q MV     P+ +TY +++ 
Sbjct: 422 GLELFRKMSLRGVVADTVTYNTLIQGFCELGKLNVAKELFQEMVSRKVPPNIVTYKILLD 481

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
           GLC  G+   A+ + +++  S  E D+  YN I+  M +  K   A   +     KG  P
Sbjct: 482 GLCDNGESEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKP 541

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            + TY I+I  +CK+  ++ A  +   M  +G +PD  TYN L+      G    +V +I
Sbjct: 542 GVKTYNIMIGGLCKKGPLSEAELLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLI 601

Query: 316 NNLLSRGMEPNSITYNTLLHSL 337
             L   G   ++ T   ++  L
Sbjct: 602 EELKRCGFSVDASTIKMVIDML 623



 Score = 39.3 bits (90), Expect = 6.4,   Method: Compositional matrix adjust.
 Identities = 30/130 (23%), Positives = 56/130 (43%), Gaps = 1/130 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    N I+   C+  K+ DA  L   +  +   P       +I GL +   + +A 
Sbjct: 504 MELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPGVKTYNIMIGGLCKKGPLSEAE 563

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M   G  PD  TYN+++      G    ++ L++E+   G   D  T   ++  M
Sbjct: 564 LLFRKMEEDGHAPDGWTYNILIRAHLGDGDATKSVKLIEELKRCGFSVDASTIKMVI-DM 622

Query: 233 FDNGKFKQAI 242
             +G+ K++ 
Sbjct: 623 LSDGRLKKSF 632


>gi|357439843|ref|XP_003590199.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355479247|gb|AES60450.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 123/453 (27%), Positives = 241/453 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++++  T N ++ ++C   ++  A  +   + +    PD      LIRGL    +++++ 
Sbjct: 80  IQSNYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESL 139

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                +V  G   D ++Y  ++ GLCK GQ   A+ LL ++    C PDV+ YNTI+  +
Sbjct: 140 NFHDRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGL 199

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +   + A   + +   K   P ++TYT LI   C    + +A  +L++M ++  +P++
Sbjct: 200 CKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNV 259

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+N+LV+  CK+GK  +A  ++  ++  G+ P+  TYN L+              + +I
Sbjct: 260 CTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNI 319

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +   +  V +Y+++I+GL K  ++D A++ F  M ++N  PD+V Y++++  LCK G 
Sbjct: 320 MAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGR 379

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +N AL+ +  ++     P +ITY +LID L K   ++KA+ L  ++ + GI  +  T+  
Sbjct: 380 INSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNI 439

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++ +A  + +++  +G+ +    Y ++I+GLCK    D A+ +L  M    
Sbjct: 440 LVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKMEDKG 499

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             PD   + TI+    +  M ++A KL +++I+
Sbjct: 500 CVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 223/473 (47%), Gaps = 35/473 (7%)

Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
           +F S   L DA    + M R    P       ++  L++         + Q M + G   
Sbjct: 23  HFHSLPNLNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQS 82

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + IT N+++   C   QI SA ++  ++   G +PD+ITY T++R +  NG+ K+++ F 
Sbjct: 83  NYITLNILINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFH 142

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
              + +G     ++Y  LI  +CK      A+ +L  +  E C PD+V YN++++  CK 
Sbjct: 143 DRLVSQGIKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKD 202

Query: 306 -----------------------------------GKYDDAVLVINNLLSRGMEPNSITY 330
                                              G+ D A  ++N ++ + + PN  T+
Sbjct: 203 KLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQLDKAFGLLNEMVLKNVNPNVCTF 262

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           NTL+  L   G       ++ +M +    P VFTYN L++G        +A N FN M  
Sbjct: 263 NTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNALMDGYFLVKEAGKAKNVFNIMAQ 322

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
                D+ +Y+ ++  L K  ML+EA+ L   +   +  P ++ Y++LIDGL K G +  
Sbjct: 323 MGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENVIPDVVAYSSLIDGLCKSGRINS 382

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+    +M + G  P+ IT+ +LI   C++ QV++A+ LLK+I  +G +     Y +++ 
Sbjct: 383 ALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIALLKKIKDQGIQANMYTYNILVD 442

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           GLCK  ++  A +V + ++   +  D   +S ++  +  + + +EA  L  K+
Sbjct: 443 GLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLCKESLFDEALTLLSKM 495



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 105/352 (29%), Positives = 178/352 (50%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           +G     D    N I+   C    + DA  L   M  +   P+     +LI G   + ++
Sbjct: 181 EGEICRPDVVMYNTIIDGLCKDKLVRDAFDLYCEMFEKRVFPNVVTYTSLIYGFCIVGQL 240

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           +KA  +L  MV+    P+  T+N +V GLCK G++R A +L+  M   G  PDV TYN +
Sbjct: 241 DKAFGLLNEMVLKNVNPNVCTFNTLVDGLCKEGKMREAKSLVAVMMKEGVGPDVFTYNAL 300

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +   F   +  +A   +    + G    + +Y+++I  + K   +  A+++ + M  E  
Sbjct: 301 MDGYFLVKEAGKAKNVFNIMAQMGVTCDVHSYSVMISGLSKMKMLDEAMDLFEGMRNENV 360

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD+V Y+SL++  CK G+ + A+  ++ +  RG  PN ITY +L+ +L      D    
Sbjct: 361 IPDVVAYSSLIDGLCKSGRINSALKYVDEMHDRGQPPNVITYTSLIDALCKSHQVDKAIA 420

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  + +      ++TYNIL++GLCK G +  A   F  ++ K    D+VTY+ ++  LC
Sbjct: 421 LLKKIKDQGIQANMYTYNILVDGLCKDGRLTDAQKVFQDLLMKGHNVDVVTYSIMINGLC 480

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           KE + +EAL LL  +    C P  I Y T+I+   +K   +KA  L  +M++
Sbjct: 481 KESLFDEALTLLSKMEDKGCVPDAIAYETIINAFFEKDMNDKAEKLLREMID 532



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 53/197 (26%), Positives = 102/197 (51%)

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           ++ AI+SFN+M+     P I+ +  +LG+L K       + L   +         IT N 
Sbjct: 30  LNDAIDSFNRMLRMRPPPPIIKFGKILGSLVKTKHYPIVIHLFQRMELHGIQSNYITLNI 89

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+       +  A  ++ ++++ G  PD IT+ TLI G C   QV+E+++    +  +G
Sbjct: 90  LINSYCHLRQINSAFSVFAKILKLGYQPDIITYTTLIRGLCLNGQVKESLNFHDRLVSQG 149

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K+ + +Y  +I+GLCK  +   A+++L  +     +PD  +++TI+  +  D +  +A+
Sbjct: 150 IKLDHVSYGTLINGLCKIGQTGPALRLLRKIEGEICRPDVVMYNTIIDGLCKDKLVRDAF 209

Query: 558 KLWQKLIEWKVFEKGTT 574
            L+ ++ E +VF    T
Sbjct: 210 DLYCEMFEKRVFPNVVT 226


>gi|32527606|gb|AAP86200.1| pentatricopeptide repeat-containing protein [Raphanus sativus]
          Length = 654

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/471 (29%), Positives = 224/471 (47%), Gaps = 57/471 (12%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +L   C   ++++A  L   M + N +        L+ GL R  R+ +A  +L  M
Sbjct: 150 TFSTLLHGLCVEDRISEALDLFHQMCKPNVVT----FTTLMNGLCREGRVVEAVALLDRM 205

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS--------------------VSG- 217
           +  G  P+ ITY  +V G+CK G   SA+ LL +M                     ++G 
Sbjct: 206 LEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGF 265

Query: 218 ---------------------CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
                                  PDV+TYN ++      GKF +A   + + L +G  P 
Sbjct: 266 CSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPS 325

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
            ITY+ +I+  CKQ  +  A  +   MA +GCSPDI+T+N+L+   C+  + DD + +++
Sbjct: 326 TITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 385

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +   G+  N+ITY TL+H     G  +A   +L  M  +   P V T N L++GLC  G
Sbjct: 386 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNG 445

Query: 377 LVDRAINSFNQMVSK-----------NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
            +  A+  F  M                +PD+ TYN ++  L  EG   EA +L   +  
Sbjct: 446 KLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPH 505

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P  ITYN++I GL K+  +++A  ++  M     SP+ +T  TLI G+C+A +V++
Sbjct: 506 RGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKAGRVDD 565

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            ++L  E+G+RG       Y  +IHG  K   ++ A+ + + M++S   PD
Sbjct: 566 GLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPD 616



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 134/456 (29%), Positives = 225/456 (49%), Gaps = 22/456 (4%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ FCS  KL  A      + +    P       L+ GL   DRI +A  +   M    
Sbjct: 119 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISEALDLFHQMCK-- 176

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +T+  ++ GLC+ G++  A+ALLD M   G +P+ ITY TI+  M   G    A+
Sbjct: 177 --PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 234

Query: 243 GFWK--DQLRKGCPPYLI----TYTILIEQVCKQCGIARAIEVLDDM-AIEGCSPDIVTY 295
              +  +++    P  +I      T +I   C     + A ++L +M   +  SPD+VTY
Sbjct: 235 NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTY 294

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N   K+GK+ +A  + + +L RG+ P++ITY++++     +   DA + +  +M  
Sbjct: 295 NALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMAT 354

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SP + T+N LI G C+   VD  I   ++M       + +TY T++   C+ G LN 
Sbjct: 355 KGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNA 414

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-----------NGIS 464
           A  LL  +  S   P ++T NTL+DGL   G ++ A+ ++  M +           NG+ 
Sbjct: 415 AQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVE 474

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD  T+  LI G     +  EA +L +E+  RG       Y  VIHGLCK  ++D A Q+
Sbjct: 475 PDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQM 534

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            + M S  + P+   F+T++      G  ++  +L+
Sbjct: 535 FDSMGSKSFSPNVVTFTTLINGYCKAGRVDDGLELF 570



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/383 (29%), Positives = 198/383 (51%), Gaps = 12/383 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           ++  FCS G+ ++A +L+  M  R +I PD      LI   ++  +  +A ++   M+  
Sbjct: 261 MINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPR 320

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G +P TITY+ M+ G CK+ ++ +A  +   M+  GC PD+IT+NT++       +    
Sbjct: 321 GIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDG 380

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           I    +    G     ITYT LI   C+   +  A ++L +M   G  P++VT N+L++ 
Sbjct: 381 IKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDG 440

Query: 302 SCKQGKYDDAVLVINNLLS-----------RGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            C  GK  DA+ +   +              G+EP+  TYN L+  L + G +   +++ 
Sbjct: 441 LCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELY 500

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           + M      P   TYN +I+GLCK   +D A   F+ M SK+  P++VT+ T++   CK 
Sbjct: 501 EEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSMGSKSFSPNVVTFTTLINGYCKA 560

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G +++ L+L   +         ITY TLI G  K G +  A+ ++ +MM +G+ PD IT 
Sbjct: 561 GRVDDGLELFCEMGRRGIVANAITYITLIHGFRKVGNINGALDIFQEMMASGVYPDTITI 620

Query: 471 RTLIWGFCRADQVEEAVDLLKEI 493
           R ++ G    ++++ AV +L+++
Sbjct: 621 RNMLTGLWSKEELKRAVAMLEDL 643



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 217/420 (51%), Gaps = 11/420 (2%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           + L  G   I  +E A  +   MV S  +P  I +  ++G + + G++   I+L  +M +
Sbjct: 47  LKLRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFCKLMGVVVRMGRLDVVISLHRKMEM 106

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
                +  ++  +++      K   A+  +    + G  P ++T++ L+  +C +  I+ 
Sbjct: 107 RRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISE 166

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+++   M    C P++VT+ +L+N  C++G+  +AV +++ +L  G++PN ITY T++ 
Sbjct: 167 ALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 222

Query: 336 SLGSRGCWDAVDKILDIMNEASH-SPTVFTYNI-----LINGLCKYGLVDRAINSFNQMV 389
            +   G   +   +L  M E SH  P V  + +     +ING C  G    A     +M+
Sbjct: 223 GMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLLQEML 282

Query: 390 S-KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             K   PD+VTYN ++ A  KEG   EA +L   +      P  ITY+++IDG  K+  +
Sbjct: 283 ERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCKQNRL 342

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           + A  ++  M   G SPD IT  TLI G+CRA +V++ + LL E+ + G       Y  +
Sbjct: 343 DAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTL 402

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           IHG C+   ++ A  +L+ M+SS   P+    +T++  + D+G  ++A ++++ + + K+
Sbjct: 403 IHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKM 462



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 120/465 (25%), Positives = 226/465 (48%), Gaps = 32/465 (6%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           K+   F     L DA  L   M R   +P    FC  L+  ++R+ R++    + + M M
Sbjct: 48  KLRSGFHEIKGLEDAIDLFGDMVRSRPLPSVIDFC-KLMGVVVRMGRLDVVISLHRKMEM 106

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
                +  ++ +++   C   ++  A++   +++  G  P V+T++T+L  +    +  +
Sbjct: 107 RRVPCNAYSFTILMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFSTLLHGLCVEDRISE 166

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    D   + C P ++T+T L+  +C++  +  A+ +LD M  +G  P+ +TY ++V+
Sbjct: 167 AL----DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVD 222

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC----------WDAVDKIL 350
             CK G    A+    NLL +  E + I  N ++  L  R C          W    ++L
Sbjct: 223 GMCKMGDTVSAL----NLLRKMEEVSHIKPNVVIWPLERRTCMINGFCSSGRWSEAQQLL 278

Query: 351 DIMNEASH-SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
             M E    SP V TYN LIN   K G    A   +++M+ +   P  +TY++++   CK
Sbjct: 279 QEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEMLPRGIIPSTITYSSMIDGFCK 338

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +  L+ A  + +L+    CSP +IT+NTLI G  +   ++  + L  +M E G+  + IT
Sbjct: 339 QNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTIT 398

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + TLI GFC+   +  A DLL+E+   G          ++ GLC + K+  A+++ + M 
Sbjct: 399 YTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQ 458

Query: 530 SSRY-----------KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            S+            +PD   ++ ++  + ++G   EA +L++++
Sbjct: 459 KSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEELYEEM 503



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 199/400 (49%), Gaps = 22/400 (5%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P  +T++ ++ GLC   +I  A+ L  +M    C+P+V+T+ T++  +   G+  +A
Sbjct: 143 GFHPTVVTFSTLLHGLCVEDRISEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEA 198

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA-IEGCSPDIVTY----- 295
           +      L  G  P  ITY  +++ +CK      A+ +L  M  +    P++V +     
Sbjct: 199 VALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIKPNVVIWPLERR 258

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
             ++N  C  G++ +A  ++  +L R  + P+ +TYN L+++    G +   +++ D M 
Sbjct: 259 TCMINGFCSSGRWSEAQQLLQEMLERKKISPDVVTYNALINAFVKEGKFFEAEELYDEML 318

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P+  TY+ +I+G CK   +D A + F  M +K C PDI+T+NT++   C+   ++
Sbjct: 319 PRGIIPSTITYSSMIDGFCKQNRLDAAEHMFYLMATKGCSPDIITFNTLIAGYCRAKRVD 378

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           + ++LLH +  +      ITY TLI G  + G +  A  L  +M+ +G+ P+ +T  TL+
Sbjct: 379 DGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMVSSGVCPNVVTCNTLL 438

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNS-----------AYRLVIHGLCKSKKVDMAIQ 523
            G C   ++++A+++ K + K    +  S            Y ++I GL    K   A +
Sbjct: 439 DGLCDNGKLKDALEMFKAMQKSKMDIDASHPFNGVEPDVQTYNILISGLINEGKFLEAEE 498

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + E M      PD   +++++  +      +EA +++  +
Sbjct: 499 LYEEMPHRGIVPDTITYNSVIHGLCKQSRLDEATQMFDSM 538


>gi|242082678|ref|XP_002441764.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
 gi|241942457|gb|EES15602.1| hypothetical protein SORBIDRAFT_08g002022 [Sorghum bicolor]
          Length = 695

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 230/454 (50%), Gaps = 6/454 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKA 171
           V  + +T N IL       +     +L D++     +P+ F F I +I  L +   + +A
Sbjct: 165 VPPNTRTCNHILLRLARNRQGGLVRRLFDLLP----VPNVFTFNI-VIDFLCKEGELVEA 219

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M   G  PD +TYN ++ G  K G +     L+ EM  SGC  DV+TYN ++  
Sbjct: 220 RALFVRMKAMGCSPDVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINC 279

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G+ ++A  ++ +  R+G    ++T++  ++  CK+  +  A+++   M + G  P+
Sbjct: 280 FSKFGRMEKAYSYFGEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPN 339

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
             TY SLV+ +CK G+ DDA+++++ ++ +G+ PN +TY  ++  L   G     D +L 
Sbjct: 340 EFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLS 399

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           +M           Y  LI+G       +RA++  NQM +K  + D+  Y T++  LCK+ 
Sbjct: 400 LMERGGVKANELLYTTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQ 459

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            ++EA  LLH + G    P  + Y T++D L K G   +A+ L  +++++G  P+ +T+ 
Sbjct: 460 KVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYC 519

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            LI G C+A  + EA+    ++ + G      AY  +I G CK   ++ A+ ++  MI  
Sbjct: 520 ALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDK 579

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               D  V+++++         ++A+ L  K+IE
Sbjct: 580 GMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIE 613



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 212/448 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +   G L +  +L+  M +     D      LI    +  R+EKA    
Sbjct: 234 DVVTYNSLIDGYGKCGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYF 293

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G V + +T++  V   CK G ++ A+ L  +M V G  P+  TY +++      
Sbjct: 294 GEMKRQGVVANVVTFSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKA 353

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   AI    + + +G  P ++TYT++++ +CK+  +A A  VL  M   G   + + Y
Sbjct: 354 GRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAEADNVLSLMERGGVKANELLY 413

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++        + A+ ++N + ++GME +   Y TL+  L      D    +L  M  
Sbjct: 414 TTLIHGHFMNNNSERALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAG 473

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    Y  +++ L K G    A+   ++++    QP++VTY  ++  LCK G ++E
Sbjct: 474 CGLRPNTVIYTTIMDALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISE 533

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+   + +      P +  Y  LIDG  K G + KAM L  +M++ G+S D + + +LI 
Sbjct: 534 AISHFNKMRELGLDPNVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLID 593

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+ +   +++A  L  ++ + G ++    Y   I G C    +  A  VL  MI +   P
Sbjct: 594 GYMKQANLQDAFALKTKMIESGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITP 653

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D TV++ +++K    G  EEA  L  ++
Sbjct: 654 DKTVYNCLIRKYQKLGNMEEASSLQNEM 681



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 83/267 (31%), Positives = 139/267 (52%), Gaps = 6/267 (2%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P +V  ++L++     G  DDAV  +  +    + PN+ T N +L  L        V ++
Sbjct: 134 PSVV--DTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRL 191

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            D++      P VFT+NI+I+ LCK G +  A   F +M +  C PD+VTYN+++    K
Sbjct: 192 FDLLP----VPNVFTFNIVIDFLCKEGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGK 247

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G L E  QL+  +  S C+  ++TYN LI+  +K G MEKA   +G+M   G+  + +T
Sbjct: 248 CGDLEEVEQLVSEMRKSGCAADVVTYNALINCFSKFGRMEKAYSYFGEMKRQGVVANVVT 307

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             T +  FC+   V+EA+ L  ++  RG       Y  ++ G CK+ ++D AI +L+ M+
Sbjct: 308 FSTFVDAFCKEGLVQEAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMV 367

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEA 556
                P+   ++ +V  +  +G   EA
Sbjct: 368 HQGLVPNVVTYTVMVDGLCKEGKVAEA 394



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 73/296 (24%), Positives = 129/296 (43%), Gaps = 37/296 (12%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A  L++ M  +    D      LI GL +  ++++A  +L  M   G  P+T+ Y  ++ 
Sbjct: 429 ALDLLNQMKNKGMELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMD 488

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
            L K G+   A+ALL ++  SG +P+V+TY  ++  +   G   +AI  +      G  P
Sbjct: 489 ALFKAGKESEAVALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDP 548

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            +  YT LI+  CK   + +A+ ++++M  +G S D V Y SL++   KQ    DA  + 
Sbjct: 549 NVQAYTALIDGFCKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALK 608

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
             ++  G++                         LD+          + Y   I+G C  
Sbjct: 609 TKMIESGLQ-------------------------LDL----------YCYTCFISGFCNM 633

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG--SSCS 429
            ++  A    ++M+     PD   YN ++    K G + EA  L + +    SSC+
Sbjct: 634 NMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNEMESVLSSCT 689



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 57/249 (22%), Positives = 105/249 (42%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      ++   C   K+ +A  L+  MA     P+      ++  L +  +  +A 
Sbjct: 441 MELDVSLYGTLIWGLCKDQKVDEAKSLLHKMAGCGLRPNTVIYTTIMDALFKAGKESEAV 500

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  ++ SG  P+ +TY  ++ GLCK G I  AI+  ++M   G +P+V  Y  ++   
Sbjct: 501 ALLHKILDSGFQPNVVTYCALIDGLCKAGSISEAISHFNKMRELGLDPNVQAYTALIDGF 560

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A+    + + KG     + YT LI+   KQ  +  A  +   M   G   D+
Sbjct: 561 CKIGSLNKAMHLMNEMIDKGMSLDKVVYTSLIDGYMKQANLQDAFALKTKMIESGLQLDL 620

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y   ++  C      +A  V++ ++  G+ P+   YN L+      G  +    + + 
Sbjct: 621 YCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTVYNCLIRKYQKLGNMEEASSLQNE 680

Query: 353 MNEASHSPT 361
           M     S T
Sbjct: 681 MESVLSSCT 689


>gi|224123734|ref|XP_002330195.1| predicted protein [Populus trichocarpa]
 gi|222871651|gb|EEF08782.1| predicted protein [Populus trichocarpa]
          Length = 529

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 121/402 (30%), Positives = 214/402 (53%), Gaps = 3/402 (0%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  L+ GL++         V + M+      + I++N++V GLCK G++  A  ++++M 
Sbjct: 123 CNPLLSGLVKESENGDMEFVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMK 182

Query: 215 VSGCEPDVITYNTILR---TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           V G  P+VITYNT++     M   GK  +A    K+ + KG  P  +TY ILI+  CK  
Sbjct: 183 VWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDE 242

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            ++ A+ V  +M  +G  P++VTYN L+N  C  GK D+AV + + ++S  +EPN +T+N
Sbjct: 243 NVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHN 302

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            L++        +    + + M +    P   TY  LI+  CK G ++ A   +N M+ +
Sbjct: 303 VLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDR 362

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              P++ TYN ++  LC++G +  A  L++ +     S  ++TYN LID L KKG   KA
Sbjct: 363 GIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKA 422

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           + L  +M E G++P  +T+ TL+ G+CR   +  A+ +   + ++G +     + ++I G
Sbjct: 423 VKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKG 482

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            C   +++ A  +L  M+     P+ T +  I +++ + G  
Sbjct: 483 FCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 118/371 (31%), Positives = 208/371 (56%), Gaps = 4/371 (1%)

Query: 141 DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           +++ R+ ++    F I ++ GL ++ ++ +A  V++ M + G  P+ ITYN ++ G CK 
Sbjct: 145 EMIKRKIELNVISFNI-VVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKM 203

Query: 201 GQI---RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           G+I     A A+L EM   G  P+ +TYN ++     +     A+  + +  R+G  P +
Sbjct: 204 GRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNV 263

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +TY ILI  +C    +  A+ + D M      P++VT+N L+N  CK    ++A+ + N+
Sbjct: 264 VTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFND 323

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +  +G++PN++TY TL+ +    G  +    + ++M +    P V TYN LI GLC+ G 
Sbjct: 324 MEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGD 383

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           V  A +  N+MVSK    D+VTYN ++ +LCK+G   +A++LL  +     +P  +TYNT
Sbjct: 384 VKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNT 443

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           L+DG  ++G +  A+++  +M   G   + +TH  LI GFC   ++E+A  LL E+ +RG
Sbjct: 444 LMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERG 503

Query: 498 NKMRNSAYRLV 508
                + Y ++
Sbjct: 504 LVPNRTTYEII 514



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 184/356 (51%), Gaps = 3/356 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRG---LIRIDRIEKASKVLQI 177
           N ++   C  GKL  A  +I+ M      P+      LI G   + RI ++ KA  +L+ 
Sbjct: 159 NIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGYCKMGRIGKMYKADAILKE 218

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV  G  P+ +TYN+++ G CK   +  A+ +  EM   G  P+V+TYN ++  +  +GK
Sbjct: 219 MVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGK 278

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+      +     P ++T+ +LI   CK   +  AI + +DM  +G  P+ +TY +
Sbjct: 279 VDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTT 338

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  CK G+ +DA  + N ++ RG+ P   TYN L+  L  +G   A   +++ M    
Sbjct: 339 LIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKK 398

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            S  V TYNILI+ LCK G   +A+   ++M  K   P  VTYNT++   C+EG L  AL
Sbjct: 399 LSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAAL 458

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +   +        ++T+N LI G   KG +E A  L  +M+E G+ P+  T+  +
Sbjct: 459 IVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEII 514



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 208/430 (48%), Gaps = 9/430 (2%)

Query: 154 FCIN------LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI 207
           FC+N      L+   +R  +I +  +  +     G     I+ N ++ GL K  +     
Sbjct: 81  FCVNSILADMLVLAFVRNLKILRGFEAFKRAGDYGFKLSLISCNPLLSGLVKESENGDME 140

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
            +  EM     E +VI++N ++  +   GK  +A    +D    G  P +ITY  LI+  
Sbjct: 141 FVYREMIKRKIELNVISFNIVVNGLCKVGKLNRAGDVIEDMKVWGVSPNVITYNTLIDGY 200

Query: 268 CKQCGIAR---AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           CK   I +   A  +L +M  +G  P+ VTYN L++  CK      A+ V   +  +G+ 
Sbjct: 201 CKMGRIGKMYKADAILKEMVAKGICPNEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLR 260

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN +TYN L++ L S G  D    + D M  +   P V T+N+LING CK   V+ AIN 
Sbjct: 261 PNVVTYNILINGLCSDGKVDEAVALRDQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINL 320

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           FN M  +   P+ +TY T++ A CK+G + +A  L +++      P + TYN LI GL +
Sbjct: 321 FNDMEKQGVDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCR 380

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           KG ++ A  L  +M+   +S D +T+  LI   C+  +  +AV LL E+ ++G    +  
Sbjct: 381 KGDVKAARSLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVT 440

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  ++ G C+   +  A+ V   M     + +    + ++K     G  E+A  L  +++
Sbjct: 441 YNTLMDGYCREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEML 500

Query: 565 EWKVFEKGTT 574
           E  +    TT
Sbjct: 501 ERGLVPNRTT 510



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 80/298 (26%), Positives = 152/298 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++  FC    ++ A ++   M R+   P+      LI GL    ++++A  + 
Sbjct: 227 NEVTYNILIDGFCKDENVSGAMRVFGEMQRQGLRPNVVTYNILINGLCSDGKVDEAVALR 286

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV S   P+ +T+N+++ G CK   +  AI L ++M   G +P+ +TY T++     +
Sbjct: 287 DQMVSSDLEPNVVTHNVLINGFCKNKTVNEAINLFNDMEKQGVDPNAMTYTTLIDAYCKD 346

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ + A   +   + +G  P + TY  LI  +C++  +  A  ++++M  +  S D+VTY
Sbjct: 347 GRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAARSLMNEMVSKKLSADVVTY 406

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  CK+G+   AV +++ +  +G+ P+ +TYNTL+      G   A   +   M  
Sbjct: 407 NILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGYCREGNLRAALIVRTRMER 466

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 V T+N+LI G C  G ++ A    N+M+ +   P+  TY  +   + ++G +
Sbjct: 467 KGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNRTTYEIIKEEMMEKGFV 524



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 55/183 (30%), Positives = 92/183 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T   ++  +C  G++ DA  L ++M  R   P+      LI GL R   ++ A 
Sbjct: 329 VDPNAMTYTTLIDAYCKDGRMEDAFALYNMMIDRGIFPEVSTYNCLIAGLCRKGDVKAAR 388

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV      D +TYN+++  LCK+G+ R A+ LLDEM   G  P  +TYNT++   
Sbjct: 389 SLMNEMVSKKLSADVVTYNILIDSLCKKGESRKAVKLLDEMFEKGLNPSHVTYNTLMDGY 448

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G  + A+       RKG    ++T+ +LI+  C +  +  A  +L++M   G  P+ 
Sbjct: 449 CREGNLRAALIVRTRMERKGKQANVVTHNVLIKGFCLKGRLEDANGLLNEMLERGLVPNR 508

Query: 293 VTY 295
            TY
Sbjct: 509 TTY 511


>gi|9502388|gb|AAF88095.1|AC025417_23 T12C24.15 [Arabidopsis thaliana]
          Length = 735

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 231/444 (52%), Gaps = 1/444 (0%)

Query: 123 ILQNFCSR-GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           I+ N C R  KL+ A   +  + +    PD      LI GL    R+ +A +++  MV  
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P  IT N +V GLC  G++  A+ L+D M  +G +P+ +TY  +L+ M  +G+   A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   +    +      + Y+I+I+ +CK   +  A  + ++M I+G   DI+ Y +L+  
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G++DD   ++ +++ R + P+ + ++ L+      G     +++   M +   SP 
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TY  LI+G CK   +D+A +  + MVSK C P+I T+N ++   CK  ++++ L+L  
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++        +TYNTLI G  + G +E A  L+ +M+   + PD ++++ L+ G C   
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           + E+A+++ ++I K   ++    Y ++IHG+C + KVD A  +   +     KPD   ++
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++  +   G   EA  L++K+ E
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEE 555



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 221/450 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + ++   C  G++++A +L+D M      P       L+ GL    ++  A  
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV +G  P+ +TY  ++  +CK GQ   A+ LL +M     + D + Y+ I+  + 
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +G    A   + +   KG    +I YT LI   C         ++L DM     +PD+V
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            +++L++   K+GK  +A  +   ++ RG+ P+++TY +L+         D  + +LD+M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P + T+NILING CK  L+D  +  F +M  +    D VTYNT++   C+ G L
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             A +L   +      P +++Y  L+DGL   G  EKA+ ++ ++ ++ +  D   +  +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C A +V++A DL   +  +G K     Y ++I GLCK   +  A  +   M    +
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            P+   ++ +++    +G   ++ KL +++
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEI 588



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 126/473 (26%), Positives = 224/473 (47%), Gaps = 19/473 (4%)

Query: 77  EWSSESHVLAVNKKLRGLTITKKSHDPSL---PSSDGPFVENDEKTNNKILQNFCSRGKL 133
           E   +  ++ +N  + GL +  K  D  L      +  F  N E T   +L+  C  G+ 
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN-EVTYGPVLKVMCKSGQT 228

Query: 134 TDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
             A +L+  M  R  ++    + I +I GL +   ++ A  +   M + G   D I Y  
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSI-IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++ G C  G+      LL +M      PDV+ ++ ++      GK ++A    K+ +++G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P  +TYT LI+  CK+  + +A  +LD M  +GC P+I T+N L+N  CK    DD +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            +   +  RG+  +++TYNTL+      G  +   ++   M      P + +Y IL++GL
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           C  G  ++A+  F ++     + DI  YN ++  +C    +++A  L   L      P +
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
            TYN +I GL KKG + +A +L+ +M E+G SP+  T+  LI          ++  L++E
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           I + G  +  S  R              A+  L  M+ + ++PD   F+T+++
Sbjct: 588 IKRCGFSVDASTLRF-------------ALSTLARMLKAGHEPDVFTFTTLLR 627



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 206/400 (51%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A  + Q M  S   P  I ++ +   + +  Q    + L  +M + G   ++ T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +       K   A       ++ G  P  +T++ LI  +C +  ++ A+E++D M   G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P ++T N+LVN  C  GK  DAVL+I+ ++  G +PN +TY  +L  +   G      +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M E         Y+I+I+GLCK G +D A N FN+M  K  + DI+ Y T++   C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G  ++  +LL  +     +P ++ ++ LID   K+G + +A  L+ +M++ GISPD +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +LI GFC+ +Q+++A  +L  +  +G       + ++I+G CK+  +D  +++   M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
                  D   ++T+++   + G  E A +L+Q+++  +V
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 213/439 (48%), Gaps = 19/439 (4%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
           R +L D S+L  ++AR  Q   +   ++L +                 M + G   +  T
Sbjct: 69  RPRLIDFSRLFSVVARTKQ---YDLVLDLCKQ----------------MELKGIAHNLYT 109

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
            ++M+   C+  ++  A + + ++   G EPD +T++T++  +   G+  +A+      +
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
             G  P LIT   L+  +C    ++ A+ ++D M   G  P+ VTY  ++   CK G+  
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A+ ++  +  R ++ +++ Y+ ++  L   G  D    + + M        +  Y  LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
            G C  G  D        M+ +   PD+V ++ ++    KEG L EA +L   +     S
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  +TY +LIDG  K+  ++KA  +   M+  G  P+  T   LI G+C+A+ +++ ++L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            +++  RG       Y  +I G C+  K+++A ++ + M+S R +PD   +  ++  + D
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 550 DGMTEEAYKLWQKLIEWKV 568
           +G  E+A ++++K+ + K+
Sbjct: 470 NGEPEKALEIFEKIEKSKM 488



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 200/408 (49%), Gaps = 25/408 (6%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           F   GKL +A +L   M +R   PD     +LI G  + ++++KA+ +L +MV  G  P+
Sbjct: 327 FVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPN 386

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             T+N+++ G CK   I   + L  +MS+ G   D +TYNT+++   + GK + A   ++
Sbjct: 387 IRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQ 446

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           + + +   P +++Y IL++ +C      +A+E+ + +       DI  YN +++  C   
Sbjct: 447 EMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNAS 506

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K DDA  +  +L  +G++P+  TYN ++  L  +G     D +   M E  HSP   TYN
Sbjct: 507 KVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYN 566

Query: 367 ILINGLCKYG-------LVDR---------------AINSFNQMVSKNCQPDIVTYNTVL 404
           ILI      G       L++                A+++  +M+    +PD+ T+ T+L
Sbjct: 567 ILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLL 626

Query: 405 GALCKE--GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
              C E    + +A  L   +      P ++TYNT+I GL     + +   +  QM E G
Sbjct: 627 RPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERG 686

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
             P+ +T  T I G C+ D    A+ LL+++ +  N+   +  +++IH
Sbjct: 687 CQPNAVTKSTFISGLCKQDLHGSAILLLRKM-ENDNEDVTTKKKILIH 733



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 122/465 (26%), Positives = 198/465 (42%), Gaps = 59/465 (12%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+   C  G L +A  L + M  +    D      LIRG     R +  +K+L+ M+   
Sbjct: 253 IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRK 312

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD + ++ ++    K G++R A  L  EM   G  PD +TY +++       +  +A 
Sbjct: 313 ITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKAN 372

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 + KGC P + T+ ILI   CK   I   +E+   M++ G   D VTYN+L+   
Sbjct: 373 HMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGF 432

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ GK + A  +   ++SR + P+ ++Y  LL  L   G  +   +I + + ++     +
Sbjct: 433 CELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDI 492

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             YNI+I+G+C    VD A + F  +  K  +PD+ TYN ++G LCK+G L+EA  L   
Sbjct: 493 GIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRK 552

Query: 423 LNGSSCSPCLITYNTLI-----DGLAKKG------------------------------- 446
           +     SP   TYN LI     +G A K                                
Sbjct: 553 MEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDASTLRFALSTLARMLK 612

Query: 447 -----------------CMEK------AMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                            C+E+      A  L+  M   G  P+ +T+ T+I G    + +
Sbjct: 613 AGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNMKAMGYKPNVVTYNTVIKGLLNGNMI 672

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            +   +L ++ +RG +         I GLCK      AI +L  M
Sbjct: 673 SQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLHGSAILLLRKM 717



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 175/376 (46%), Gaps = 35/376 (9%)

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           ++Y   LR+   + K   A+  +++  R    P LI ++ L   V +       +++   
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M ++G + ++ T + ++N  C+  K   A   +  ++  G EP+++T++TL++ L   G 
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                +++D M E  H PT+ T N L+NGLC  G V  A+   ++MV    QP+ VTY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           VL  +CK G    A++LL  +         + Y+ +IDGL K G ++ A  L+ +M   G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 463 ISPDDITHRTLIWGFCRA-----------------------------------DQVEEAV 487
              D I + TLI GFC A                                    ++ EA 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +L KE+ +RG       Y  +I G CK  ++D A  +L+LM+S    P+   F+ ++   
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 548 ADDGMTEEAYKLWQKL 563
               + ++  +L++K+
Sbjct: 398 CKANLIDDGLELFRKM 413



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 90/368 (24%), Positives = 157/368 (42%), Gaps = 59/368 (16%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T   ++  FC   +L  A+ ++D+M  +   P+      LI G  + + I+   
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + M + G V DT+TYN ++ G C+ G++  A  L  EM      PD+++Y  +L  +
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            DNG+ ++A+  ++   +      +  Y I+I  +C    +  A ++   + ++G  PD+
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG----------- 341
            TYN ++   CK+G   +A L+   +   G  PN  TYN L+ +    G           
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587

Query: 342 ---CWDAVD--------KILDIMNEASHSPTVFT-------------------------- 364
              C  +VD          L  M +A H P VFT                          
Sbjct: 588 IKRCGFSVDASTLRFALSTLARMLKAGHEPDVFTFTTLLRPFCLEENASVYDAPTLFKNM 647

Query: 365 -----------YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                      YN +I GL    ++ +     +QM  + CQP+ VT +T +  LCK+ + 
Sbjct: 648 KAMGYKPNVVTYNTVIKGLLNGNMISQVPGVLDQMFERGCQPNAVTKSTFISGLCKQDLH 707

Query: 414 NEALQLLH 421
             A+ LL 
Sbjct: 708 GSAILLLR 715



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 70/262 (26%), Positives = 138/262 (52%)

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K DDAV +   +      P  I ++ L   +     +D V  +   M     +  ++T +
Sbjct: 52  KEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLS 111

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           I+IN  C+   +  A ++  +++    +PD VT++T++  LC EG ++EAL+L+  +   
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P LIT N L++GL   G +  A++L  +M+E G  P+++T+  ++   C++ Q   A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           ++LL+++ +R  K+    Y ++I GLCK   +D A  +   M    +K D  +++T+++ 
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 547 VADDGMTEEAYKLWQKLIEWKV 568
               G  ++  KL + +I+ K+
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKI 313


>gi|238908350|emb|CAZ40335.1| non restoring pentatricopeptide repeat [Raphanus sativus]
          Length = 683

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 147/509 (28%), Positives = 241/509 (47%), Gaps = 55/509 (10%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L   C   ++++A  L   + R    PD      L+ GL R  R+ +A  +L
Sbjct: 150 DVVTFTTLLHGLCLDHRVSEALDLFHQICR----PDVLTFTTLMNGLCREGRVVEAVALL 205

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFD 234
             MV +G  PD ITY   V G+CK G   SA+ LL +M  +S  +P+V+ Y+ I+  +  
Sbjct: 206 DRMVENGLQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCK 265

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G+   +   + +   KG  P ++TY  +I   C     + A  +L +M     SP++VT
Sbjct: 266 DGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVT 325

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L+N   K+GK+ +A  + + +L RG+ PN+ITYN+++     +   DA + +  +M 
Sbjct: 326 YNALINAFVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMA 385

Query: 355 EASHSPTVFT-----------------------------------YNILINGLCKYGLVD 379
               SP VFT                                   YN LI+G C  G ++
Sbjct: 386 TKGCSPDVFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLN 445

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-------------HLLNGS 426
            A++   QM+S    PDIVT NT+L  LC  G L +AL++              H  NG 
Sbjct: 446 AALDLSQQMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNG- 504

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P ++TYN LI GL  +G   +A  LY +M   GI PD IT+ ++I G C+  +++EA
Sbjct: 505 -VEPDVLTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEA 563

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             +   +G +        +  +I+G CK+ +VD  +++   M       D  ++ T++  
Sbjct: 564 TQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYG 623

Query: 547 VADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
               G    A  ++Q++I   V+    T+
Sbjct: 624 FRKVGNINGALDIFQEMISSGVYPDTITI 652



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 137/472 (29%), Positives = 226/472 (47%), Gaps = 49/472 (10%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKA 171
           ++ D+ T    +   C  G    A  L+  M   + I P+      +I GL +  R   +
Sbjct: 213 LQPDQITYGTFVDGMCKMGDTVSALNLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDS 272

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M   G  P+ +TYN M+GG C  G+  +A  LL EM      P+V+TYN ++  
Sbjct: 273 HNLFIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINA 332

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               GKF +A   + + L +G  P  ITY  +I+  CKQ  +  A ++   MA +GCSPD
Sbjct: 333 FVKEGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPD 392

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS--------------- 336
           + T+ +L++  C   + DD + +++ +  RG+  N++TYNTL+H                
Sbjct: 393 VFTFTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQ 452

Query: 337 --LGSRGCWDAVD------------KILDIMN------------EASH-----SPTVFTY 365
             + S  C D V             K+ D +             +ASH      P V TY
Sbjct: 453 QMISSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTY 512

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           NILI GL   G    A   + +M  +   PD +TY++++  LCK+  L+EA Q+   +  
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGS 572

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
            S SP ++T+NTLI+G  K G ++  + L+ +M   GI  D I + TLI+GF +   +  
Sbjct: 573 KSFSPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNING 632

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           A+D+ +E+   G        R ++ G    ++++ A+ +LE +   RY+ +D
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDL--QRYQLED 682



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 221/485 (45%), Gaps = 51/485 (10%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ FCS  KL  A      + +    PD      L+ GL    R+ +A  +   +    
Sbjct: 122 LIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEALDLFHQICR-- 179

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +T+  ++ GLC+ G++  A+ALLD M  +G +PD ITY T +  M   G    A+
Sbjct: 180 --PDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMGDTVSAL 237

Query: 243 GFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +         P ++ Y+ +I+ +CK    + +  +  +M  +G  P+IVTYN ++  
Sbjct: 238 NLLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIVTYNCMIGG 297

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G++  A  ++  +L R + PN +TYN L+++    G +    ++ D M      P 
Sbjct: 298 FCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEMLPRGIIPN 357

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI------------------------ 397
             TYN +I+G CK   +D A + F  M +K C PD+                        
Sbjct: 358 TITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRIDDGMELLH 417

Query: 398 -----------VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
                      VTYNT++   C  G LN AL L   +  S   P ++T NTL+DGL   G
Sbjct: 418 EMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTLLDGLCDNG 477

Query: 447 CMEKAMVLYGQMME-----------NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
            ++ A+ ++  M +           NG+ PD +T+  LI G     +  EA +L +E+  
Sbjct: 478 KLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           RG       Y  +I GLCK  ++D A Q+   M S  + P+   F+T++      G  ++
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSFSPNVVTFNTLINGYCKAGRVDD 597

Query: 556 AYKLW 560
             +L+
Sbjct: 598 GLELF 602



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 221/445 (49%), Gaps = 21/445 (4%)

Query: 133 LTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
           L DA  L   M R   +P   DF+    L+  ++R++R +    + Q M       D  +
Sbjct: 62  LEDAIDLFSDMLRSRPLPSVIDFN---KLMGAVVRMERPDLVISLYQKMERKQIRCDIYS 118

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           + +++   C   ++  A++   +++  G  PDV+T+ T+L  +  + +  +A+    D  
Sbjct: 119 FTILIKCFCSCSKLPFALSTFGKLTKLGLHPDVVTFTTLLHGLCLDHRVSEAL----DLF 174

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            + C P ++T+T L+  +C++  +  A+ +LD M   G  PD +TY + V+  CK G   
Sbjct: 175 HQICRPDVLTFTTLMNGLCREGRVVEAVALLDRMVENGLQPDQITYGTFVDGMCKMG--- 231

Query: 310 DAVLVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           D V  +N  L R ME      PN + Y+ ++  L   G       +   M +    P + 
Sbjct: 232 DTVSALN--LLRKMEEISHIKPNVVIYSAIIDGLCKDGRHSDSHNLFIEMQDKGIFPNIV 289

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN +I G C  G    A     +M+ +   P++VTYN ++ A  KEG   EA +L   +
Sbjct: 290 TYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVKEGKFFEAAELYDEM 349

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P  ITYN++IDG  K+  ++ A  ++  M   G SPD  T  TLI G+C A ++
Sbjct: 350 LPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFTFTTLIDGYCGAKRI 409

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           ++ ++LL E+ +RG       Y  +IHG C    ++ A+ + + MISS   PD    +T+
Sbjct: 410 DDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMISSGVCPDIVTCNTL 469

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKV 568
           +  + D+G  ++A ++++ + + K+
Sbjct: 470 LDGLCDNGKLKDALEMFKAMQKSKM 494



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 202/402 (50%), Gaps = 18/402 (4%)

Query: 112 FVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           F+E  +K       T N ++  FC  G+ + A +L+  M  R   P+      LI   ++
Sbjct: 276 FIEMQDKGIFPNIVTYNCMIGGFCISGRWSAAQRLLQEMLERKISPNVVTYNALINAFVK 335

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             +  +A+++   M+  G +P+TITYN M+ G CK+ ++ +A  +   M+  GC PDV T
Sbjct: 336 EGKFFEAAELYDEMLPRGIIPNTITYNSMIDGFCKQDRLDAAEDMFYLMATKGCSPDVFT 395

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           + T++       +    +    +  R+G     +TY  LI   C    +  A+++   M 
Sbjct: 396 FTTLIDGYCGAKRIDDGMELLHEMPRRGLVANTVTYNTLIHGFCLVGDLNAALDLSQQMI 455

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS-----------RGMEPNSITYNTL 333
             G  PDIVT N+L++  C  GK  DA+ +   +              G+EP+ +TYN L
Sbjct: 456 SSGVCPDIVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDLDASHPFNGVEPDVLTYNIL 515

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L + G +   +++ + M      P   TY+ +I+GLCK   +D A   F  M SK+ 
Sbjct: 516 ICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFVSMGSKSF 575

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P++VT+NT++   CK G +++ L+L   +         I Y TLI G  K G +  A+ 
Sbjct: 576 SPNVVTFNTLINGYCKAGRVDDGLELFCEMGRRGIVADAIIYITLIYGFRKVGNINGALD 635

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           ++ +M+ +G+ PD IT R ++ GF   +++E AV +L+++ +
Sbjct: 636 IFQEMISSGVYPDTITIRNMLTGFWSKEELERAVAMLEDLQR 677


>gi|34015232|gb|AAQ56425.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|34015270|gb|AAQ56462.1| putative fertility restorer [Oryza sativa Japonica Group]
          Length = 1007

 Score =  216 bits (550), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 137/480 (28%), Positives = 220/480 (45%), Gaps = 35/480 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G + DA  ++  +      PD     ++I G  R   ++ A +V   M  
Sbjct: 219 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 278

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV------------------------- 215
            G  P+T+TY+ ++ GLC  G++  A  L+ EM +                         
Sbjct: 279 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 338

Query: 216 ----------SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                      GCEP+V TY  ++  +  +G  K AIG +    R G  P  +TY  LI 
Sbjct: 339 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 398

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            + +   I  A  VL+ M   GCSP+IVTYN ++   C  G    A+LV+NN+L RG   
Sbjct: 399 ILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 458

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N +TYNT++      G   +  +ILD+M +    P  ++Y  LI G CK   ++ A   F
Sbjct: 459 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 518

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           N+MV     P+ VTY  ++   CK+  L+ A  LL  +  S C P + TYN LI GL K+
Sbjct: 519 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 578

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
                A  L   M+E GI P+ +T+  +I G C+      A+++  ++ ++G       Y
Sbjct: 579 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 638

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I  L +  KV+ A  +   +      PD+  +  +++     G  E A+    ++I+
Sbjct: 639 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 698



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 117/437 (26%), Positives = 208/437 (47%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T + ++   C  G++ +A  LI  M     +P  H C   I  L  +   E A +
Sbjct: 282 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 341

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G  P+  TY  ++ GLC  G ++ AI L   MS  G  P+ +TYN ++  + 
Sbjct: 342 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 401

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +N + K A        R GC P ++TY  +I+  C      +A+ V+++M   G S ++V
Sbjct: 402 ENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 461

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+++   C  G    A+ +++ +   G +P+  +Y  L+         ++   + + M
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P   TY  LI+G CK   +D A +    M    C+P++ TYN ++  L K+   
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A +L  ++      P ++TY  +IDGL K G    A+ ++ +M+E G  P+ +T+ +L
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I    +  +VEEA +L  E+ + G       Y  +I     S KV+ A   L  MI +  
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 534 KPDDTVFSTIVKKVADD 550
           +P    +  ++K + ++
Sbjct: 702 QPTLWTYGVLIKGLKNE 718



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 217/441 (49%), Gaps = 18/441 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I++ +C  G  T A +++D+M      PD      LI G  +I ++E A  +   M
Sbjct: 462 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 521

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+ +TY  ++ G CK  ++ +A +LL+ M  SGC P+V TYN ++  +     F
Sbjct: 522 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 581

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    K  + +G  P ++TYT +I+ +CK    + A+E+ + M  +GC P+++TY+SL
Sbjct: 582 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 641

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    ++GK ++A  +   L   G+ P+ ITY  ++ +    G  +     L  M +A  
Sbjct: 642 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 701

Query: 359 SPTVFTYNILINGL-CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            PT++TY +LI GL  +Y L D+ + +   +V  NC     T +       ++ +   + 
Sbjct: 702 QPTLWTYGVLIKGLKNEYLLADQRLAALPDVV-PNCSFGYQTTD-------QDAVSVMSA 753

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L  L  G S        N L+  L+  G   +A  L G M+  G+ PD   + +L+   
Sbjct: 754 KLAELDPGLSVQ----VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 809

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            R   V+ A+ + K +  +G ++  + Y+ +I  LC+  +   A    E M+   + PDD
Sbjct: 810 LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 869

Query: 538 TVFSTIVKKVADDGMTEEAYK 558
                +V+ V  DG+  + YK
Sbjct: 870 -----VVQAVLIDGLLRDGYK 885



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 199/408 (48%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           I+LI+     + + +    L ++  SG       Y+ ++  L + G   + +     M  
Sbjct: 149 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 208

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G +P+++ YN ++  +  +G    A    K        P   TYT +I   C++  +  
Sbjct: 209 EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDS 268

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A++V + MA EGC P+ VTY++L+N  C  G+ ++A  +I  ++  G+ P + T    + 
Sbjct: 269 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 328

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           +L   GC++   ++   M      P V+TY  LI+GLC  GL+  AI  F++M      P
Sbjct: 329 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 388

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           + VTYN ++  L +   +  A  +L+L+  + CSP ++TYN +I G    G  +KAM++ 
Sbjct: 389 NTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILGDPKKAMLVM 448

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M++ G S + +T+ T+I G+C +     A+ +L  +   G K    +Y  +I G CK 
Sbjct: 449 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 508

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            K++ A  +   M+     P++  ++ ++     D   + A  L + +
Sbjct: 509 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 556



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 112/442 (25%), Positives = 198/442 (44%), Gaps = 38/442 (8%)

Query: 162 LIRIDRIEKASKVL---QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
           LI + R+   + V+     M+  G  P+ + YN ++  LCK G +  A  ++ ++  S  
Sbjct: 187 LIHLSRLGMTAAVMDRYHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEM 246

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
            PD  TY +++           A+  +    ++GC P  +TY+ LI  +C    +  A +
Sbjct: 247 SPDTFTYTSMILGHCRKHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFD 306

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           ++ +M + G  P   T    +   C  G Y+DA  +  ++ ++G EPN  TY  L+  L 
Sbjct: 307 LIREMILHGILPTAHTCTGPIIALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLC 366

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI- 397
             G       +   M+     P   TYN LIN L +   +  A    N M    C P+I 
Sbjct: 367 VSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIV 426

Query: 398 ----------------------------------VTYNTVLGALCKEGMLNEALQLLHLL 423
                                             VTYNT++   C  G    AL++L L+
Sbjct: 427 TYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLM 486

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
               C P   +Y  LI G  K   ME A  L+ +M+++G+ P+++T+  LI G+C+ +++
Sbjct: 487 RDGGCKPDEWSYTELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKL 546

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           + A  LL+ + + G +     Y ++IHGL K      A ++ ++MI     P+   ++ +
Sbjct: 547 DTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAM 606

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           +  +  +G T  A +++ K+IE
Sbjct: 607 IDGLCKNGSTSLALEMFNKMIE 628



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 157/336 (46%), Gaps = 2/336 (0%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S DG F   +  T N ++       ++  A  ++++M R    P+      +I+G   + 
Sbjct: 382 SRDGVF--PNTVTYNALINILVENRRIKYAFVVLNLMGRNGCSPNIVTYNEMIKGYCILG 439

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
             +KA  V+  M+  G   + +TYN ++ G C  G   SA+ +LD M   GC+PD  +Y 
Sbjct: 440 DPKKAMLVMNNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYT 499

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++       K + A G + + +  G  P  +TYT LI+  CK   +  A  +L+ M   
Sbjct: 500 ELICGFCKISKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRS 559

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GC P++ TYN L++   KQ  +  A  +   ++  G+ PN +TY  ++  L   G     
Sbjct: 560 GCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLA 619

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            ++ + M E    P + TY+ LI  L + G V+ A N F ++      PD +TY  ++ A
Sbjct: 620 LEMFNKMIEQGCLPNLLTYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEA 679

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
               G +  A   L  +  + C P L TY  LI GL
Sbjct: 680 YIMSGKVEHAFNFLGRMIKAGCQPTLWTYGVLIKGL 715



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 162/363 (44%), Gaps = 30/363 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T   ++  +C   KL  A+ L++ M R    P+      LI GL + +    A ++ 
Sbjct: 529 NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 588

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M+  G  P+ +TY  M+ GLCK G    A+ + ++M   GC P+++TY++++R +   
Sbjct: 589 KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 648

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK ++A   + +  R G  P  ITY  +IE       +  A   L  M   GC P + TY
Sbjct: 649 GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 708

Query: 296 NSLVNF--------------------SCKQGKY---DDAVLVINNLLSRGMEP--NSITY 330
             L+                      +C  G      DAV V++  L+  ++P  +    
Sbjct: 709 GVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQ 767

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N L+ +L + G W   +++L  M      P    YN L+  L +   VD A+  F  M +
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG---- 446
           + C+  +  Y  ++ ALC+     EA      +   + +P  +    LIDGL + G    
Sbjct: 828 QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 887

Query: 447 CME 449
           CME
Sbjct: 888 CME 890



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 105/274 (38%), Gaps = 24/274 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +++     GK+ +A  L   + R   IPD    + +I   I   ++E A   L  M
Sbjct: 637 TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 696

Query: 179 VMSGGVPDTITYNMMVGGL--------------------CKRGQIRSAIALLDEMSVSGC 218
           + +G  P   TY +++ GL                    C  G   +    +  MS    
Sbjct: 697 IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 756

Query: 219 EPD----VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           E D    V   N ++  +   G++ +A       + +G  P    Y  L+  + +   + 
Sbjct: 757 ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 816

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+ V   M+ +GC   +  Y  L+   C+  +  +A +   N+L R   P+ +    L+
Sbjct: 817 LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 876

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             L   G  D   + L IM    + P+   Y IL
Sbjct: 877 DGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 910



 Score = 45.8 bits (107), Expect = 0.064,   Method: Compositional matrix adjust.
 Identities = 41/174 (23%), Positives = 71/174 (40%), Gaps = 6/174 (3%)

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N +V  L   G+   A  LL  M   G  PD   YN++L ++        A+G +K    
Sbjct: 768 NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 827

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
           +GC  +L  Y    E +C  C + R  E     ++M +   +PD V    L++   + G 
Sbjct: 828 QGCEVHLNGYK---ELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGY 884

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            D  +  ++ + +R   P+   Y  L      +  W  V   +  +  A+ S +
Sbjct: 885 KDLCMEFLHIMETRRYMPSFHIYTILAREASKKRSWKHVAGCITKVKRATCSTS 938



 Score = 38.9 bits (89), Expect = 8.3,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 4/182 (2%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCIN----LIRGLIRIDRIEKASKVLQIMVMSGG 183
           CS G  T     + +M+ +    D    +     L+  L    R  +A+++L  M+  G 
Sbjct: 736 CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 795

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            PD   YN ++  L +   +  A+ +   MS  GCE  +  Y  ++  +    + K+A  
Sbjct: 796 CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 855

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +++ L +   P  +   +LI+ + +       +E L  M      P    Y  L   + 
Sbjct: 856 TFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREAS 915

Query: 304 KQ 305
           K+
Sbjct: 916 KK 917


>gi|302793330|ref|XP_002978430.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
 gi|300153779|gb|EFJ20416.1| hypothetical protein SELMODRAFT_108734 [Selaginella moellendorffii]
          Length = 475

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/381 (30%), Positives = 202/381 (53%), Gaps = 4/381 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++Q  C  G++  A  L++ M +R   PD      LI  L + D+I++A + LQ M
Sbjct: 51  TCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 110

Query: 179 --VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDN 235
              +S       +YN ++  LCK  ++  A A+   M S     PDV++Y+ ++      
Sbjct: 111 NRTISTRASSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKI 170

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A   +K  +   C P + TY   +  + ++  IA A  V ++M   GCSPD++TY
Sbjct: 171 DELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITY 230

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++      K+D A  +   ++SRG  PN++TYN LLH L      D   ++   M E
Sbjct: 231 STLIHGFSLARKHDQAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVE 290

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TY  L+ G C  G +++A+  F++MVSK   PD+V YN +L    + G   E
Sbjct: 291 RGCDPDKVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGE 350

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGISPDDITHRTLI 474
           A QL  ++    C P  +++N +IDGL+K   ++ A+ ++ +M  ++G SPD +T+ +LI
Sbjct: 351 ARQLFQVMVSRECKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLI 410

Query: 475 WGFCRADQVEEAVDLLKEIGK 495
           +G C   ++ EA+ + KEI +
Sbjct: 411 FGLCGEQRLSEAMKVFKEIDR 431



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/328 (31%), Positives = 172/328 (52%), Gaps = 2/328 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIM-ARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +L + C   K+  A  +   M + R+ +PD      LI G  +ID + +A K+ + M+
Sbjct: 125 NSLLNSLCKAKKVHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 184

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
               VP+  TYN  + GL ++G+I  A  + +EM  +GC PDVITY+T++       K  
Sbjct: 185 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHD 244

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           QA   ++  + +GC P  +TY  L+  +CK+     A E+   M   GC PD VTY +L+
Sbjct: 245 QAHELFEAMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLL 304

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C  GK + AV V + ++S+G +P+ + YN LL      G      ++  +M      
Sbjct: 305 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECK 364

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQ 418
           P   ++NI+I+GL K   +D A+  F +M   + C PD+VTYN+++  LC E  L+EA++
Sbjct: 365 PDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMK 424

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +   ++    SP    +N L++ +   G
Sbjct: 425 VFKEIDRLKLSPDPHAFNVLLEAMYAAG 452



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/418 (28%), Positives = 210/418 (50%), Gaps = 7/418 (1%)

Query: 158 LIRGLIRIDRIEKA---SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
            + GL +  +IE+A    + +Q  + S   P + T + ++  LCK G++ SA++LL+ M 
Sbjct: 17  FLGGLCKSGKIEQAFEACRTMQESLSSSQPPSSGTCHSVIQELCKAGRVDSALSLLETMI 76

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR--KGCPPYLITYTILIEQVCKQCG 272
             G  PD+ T++ ++  +    K ++A  F +   R          +Y  L+  +CK   
Sbjct: 77  KRGYCPDMATHSMLINELCKADKIQEAQEFLQGMNRTISTRASSCFSYNSLLNSLCKAKK 136

Query: 273 IARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
           + +A  +   M  E    PD+V+Y+ L++  CK  +   A  +   ++     PN  TYN
Sbjct: 137 VHQAFAIFSTMVSERSVVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYN 196

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
             L+ L  +G       + + M  A  SP V TY+ LI+G       D+A   F  M+S+
Sbjct: 197 AFLNGLMRKGRIADAQGVYEEMISAGCSPDVITYSTLIHGFSLARKHDQAHELFEAMISR 256

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
            C+P+ VTYN +L  LCKE   +EA +L   +    C P  +TY TL+ G    G +E+A
Sbjct: 257 GCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDKVTYTTLLYGFCNVGKIEQA 316

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           + ++ +M+  G  PD + +  L+ GF RA +  EA  L + +  R  K    ++ ++I G
Sbjct: 317 VEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEARQLFQVMVSRECKPDTVSHNIMIDG 376

Query: 512 LCKSKKVDMAIQVLELMISSR-YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           L K+K++D A++V E M       PD   +++++  +  +    EA K+++++   K+
Sbjct: 377 LSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKL 434


>gi|359473479|ref|XP_002267299.2| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Vitis
           vinifera]
          Length = 829

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 219/439 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  G +  A     +M +   +PD +    L+ GL     +E+A +    M  
Sbjct: 274 NALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMEN 333

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TYN++  G    G I  A  ++  M ++G  PD++TY  ++      G  ++
Sbjct: 334 HGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEE 393

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           +    +  L +G    ++TYT+L+  +CK   I  A+ +L +M + G  PD++TY+ L++
Sbjct: 394 SFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIH 453

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK+G  ++A+ +   + S+ + PNS   + ++  L  +G         D + ++  + 
Sbjct: 454 GLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAE 513

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +  YNI+I+G  K G +  A+ S+ Q++ K   P IVT+N+++   CK+G L EA++LL
Sbjct: 514 EIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLL 573

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P  +TY TL++G  ++G M     +  +M    I P  IT+  ++ G C+ 
Sbjct: 574 DTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKE 633

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++ E+V LLK +  RG       Y  VI   CK+  +  A Q+   M+    +P    +
Sbjct: 634 GRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTY 693

Query: 541 STIVKKVADDGMTEEAYKL 559
           + ++  +   G  ++A +L
Sbjct: 694 NVLINGLCVYGNLKDADRL 712



 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 228/453 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  +E TN  ++   C + +L DA   +         P       L+ G  ++  ++ A 
Sbjct: 231 VPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGSVDVAK 290

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
               +M+  G +PD  +YN+++ GLC  G +  A+   ++M   G EPD++TYN +    
Sbjct: 291 SFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGF 350

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A    +  L  G  P L+TYTILI   C+   I  + ++ + M  +G    I
Sbjct: 351 RILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSI 410

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  L++  CK G+ D+AV++++ +   G++P+ +TY+ L+H L  RG  +   ++ + 
Sbjct: 411 VTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAIELYEE 470

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P  F  + +I+GL + G +  A   F+ +   +   +I+ YN ++    K G 
Sbjct: 471 MCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGN 530

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA++    +     SP ++T+N+LI G  KKG + +A+ L   +  +G+ P  +T+ T
Sbjct: 531 IGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTT 590

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G+C    +    D+L E+  +  K     Y +V+ GLCK  ++  ++Q+L+ M +  
Sbjct: 591 LMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARG 650

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             PD   ++T+++        ++A++L  ++++
Sbjct: 651 LFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQ 683



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 218/444 (49%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N +   F   G ++ A K++  M      PD      LI G  ++  IE++ 
Sbjct: 336 VEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESF 395

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+ + M+  G     +TY +++  LCK G+I  A+ LL EM V G +PD++TY+ ++  +
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGL 455

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G  ++AI  +++   K   P     + +I  + ++  I+ A    D +     + +I
Sbjct: 456 CKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEI 515

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + YN +++   K G   +AV     ++ +G+ P  +T+N+L++    +G      K+LD 
Sbjct: 516 ILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDT 575

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +      PT  TY  L+NG C+ G +    +  ++M +K  +P  +TY  V+  LCKEG 
Sbjct: 576 IKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGR 635

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+E++QLL  +      P  ITYNT+I    K   ++KA  L+ QM+++ + P  +T+  
Sbjct: 636 LHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNV 695

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C    +++A  LL  +  +  ++   AY  +I   C    V  A+     M+   
Sbjct: 696 LINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERG 755

Query: 533 YKPDDTVFSTIVKKVADDGMTEEA 556
           ++     +S ++ ++    +  +A
Sbjct: 756 FEVSIRDYSAVINRLCKRNLITDA 779



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 213/438 (48%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  G + ++ KL + M  +           L+  L +  RI++A  +L  M + G  PD 
Sbjct: 386 CQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDL 445

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +TY++++ GLCKRG +  AI L +EM      P+    + I+  +F+ G   +A  ++  
Sbjct: 446 LTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDS 505

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
             +      +I Y I+I+   K   I  A+     +  +G SP IVT+NSL+   CK+GK
Sbjct: 506 VTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGK 565

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
             +AV +++ +   G+ P S+TY TL++     G   ++  +L  M   +  PT  TY +
Sbjct: 566 LAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTV 625

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           ++ GLCK G +  ++     M ++   PD +TYNTV+ + CK   L +A QL + +   S
Sbjct: 626 VVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHS 685

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P  +TYN LI+GL   G ++ A  L   + +  I    + + T+I   C    V+ A+
Sbjct: 686 LQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNAL 745

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
               ++ +RG ++    Y  VI+ LCK   +  A     +M++    PD  +   ++   
Sbjct: 746 VFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAF 805

Query: 548 ADDGMTEEAYKLWQKLIE 565
              G     ++++  +I+
Sbjct: 806 HRSGDPNSVFEIFAMMIK 823



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/432 (27%), Positives = 204/432 (47%), Gaps = 36/432 (8%)

Query: 179 VMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           + + GVP +  T  +++ GLC++ +++ A+  L E       P V+++N ++      G 
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A  F+   ++ G  P + +Y IL+  +C    +  A+E  +DM   G  PDIVTYN 
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNI 345

Query: 298 LVN-----------------------------------FSCKQGKYDDAVLVINNLLSRG 322
           L N                                     C+ G  +++  +   +LS+G
Sbjct: 346 LANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           ++ + +TY  LL SL   G  D    +L  M      P + TY++LI+GLCK G V+ AI
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEEAI 465

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             + +M SK   P+    + ++  L ++G ++EA      +  S  +  +I YN +IDG 
Sbjct: 466 ELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGY 525

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
           AK G + +A+  Y Q++E GISP  +T  +LI+GFC+  ++ EAV LL  I   G    +
Sbjct: 526 AKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTS 585

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +++G C+   +     +L  M +   KP    ++ +VK +  +G   E+ +L + 
Sbjct: 586 VTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKY 645

Query: 563 LIEWKVFEKGTT 574
           +    +F    T
Sbjct: 646 MYARGLFPDQIT 657



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 176/382 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++   C RG + +A +L + M  +   P+   C  +I GL     I +A    
Sbjct: 444 DLLTYSVLIHGLCKRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYF 503

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +  S    + I YN+M+ G  K G I  A+    ++   G  P ++T+N+++      
Sbjct: 504 DSVTKSDVAEEIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKK 563

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A+         G  P  +TYT L+   C++  +    ++L +M  +   P  +TY
Sbjct: 564 GKLAEAVKLLDTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITY 623

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             +V   CK+G+  ++V ++  + +RG+ P+ ITYNT++ S           ++ + M +
Sbjct: 624 TVVVKGLCKEGRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQ 683

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            S  P+  TYN+LINGLC YG +  A      +  ++ +   V Y T++ A C +G +  
Sbjct: 684 HSLQPSPVTYNVLINGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQN 743

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL   H +        +  Y+ +I+ L K+  +  A   +  M+ +GI PD      ++ 
Sbjct: 744 ALVFFHQMVERGFEVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLN 803

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
            F R+       ++   + K G
Sbjct: 804 AFHRSGDPNSVFEIFAMMIKCG 825



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 94/380 (24%), Positives = 178/380 (46%), Gaps = 3/380 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + + ++M+     +   +  A+ +L +M V   +  + TYN++L  +            +
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDV---Y 223

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            +    G P    T  ILI+ +C+Q  +  A+  L +   E   P +V++N+L++  CK 
Sbjct: 224 NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKM 283

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G  D A      ++  G+ P+  +YN LLH L   G  +   +  + M      P + TY
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           NIL NG    GL+  A     +M+     PD+VTY  ++   C+ G + E+ +L   +  
Sbjct: 344 NILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLS 403

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
                 ++TY  L+  L K G +++A++L  +M   G+ PD +T+  LI G C+   VEE
Sbjct: 404 QGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEE 463

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A++L +E+  +     +     +I GL +   +  A    + +  S    +  +++ ++ 
Sbjct: 464 AIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMID 523

Query: 546 KVADDGMTEEAYKLWQKLIE 565
             A  G   EA + ++++IE
Sbjct: 524 GYAKLGNIGEAVRSYKQIIE 543



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 92/349 (26%), Positives = 164/349 (46%)

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
           +E+  SG   +  T   ++  +    + + A+ F ++   +   P ++++  L+   CK 
Sbjct: 224 NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKM 283

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             +  A      M   G  PD+ +YN L++  C  G  ++A+   N++ + G+EP+ +TY
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N L +     G      K++  M     +P + TY ILI G C+ G ++ +     +M+S
Sbjct: 344 NILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLS 403

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +  +  IVTY  +L +LCK G ++EA+ LLH +      P L+TY+ LI GL K+G +E+
Sbjct: 404 QGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKRGAVEE 463

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+ LY +M    I P+      +I G      + EA      + K         Y ++I 
Sbjct: 464 AIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMID 523

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           G  K   +  A++  + +I     P    F++++      G   EA KL
Sbjct: 524 GYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKL 572



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/296 (29%), Positives = 151/296 (51%), Gaps = 4/296 (1%)

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +V +++   G   +  T   L++  C+Q +  DAV  +         P+ +++N L+   
Sbjct: 221 DVYNEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGF 280

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D       +M +    P V++YNIL++GLC  G ++ A+   N M +   +PDI
Sbjct: 281 CKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDI 340

Query: 398 VTYNTVLGALCKEGMLNEALQLLH--LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           VTYN +       G+++ A +++   LLNG   +P L+TY  LI G  + G +E++  L 
Sbjct: 341 VTYNILANGFRILGLISGAWKVVQRMLLNG--LNPDLVTYTILICGHCQMGNIEESFKLK 398

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M+  G+    +T+  L+   C++ +++EAV LL E+   G K     Y ++IHGLCK 
Sbjct: 399 EKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSVLIHGLCKR 458

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
             V+ AI++ E M S R  P+  V S I+  + + G   EA   +  + +  V E+
Sbjct: 459 GAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEE 514


>gi|224136310|ref|XP_002326829.1| predicted protein [Populus trichocarpa]
 gi|222835144|gb|EEE73579.1| predicted protein [Populus trichocarpa]
          Length = 664

 Score =  216 bits (550), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 141/469 (30%), Positives = 229/469 (48%), Gaps = 17/469 (3%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRN----QIPDFHFCINLIRGLIRIDRIEK 170
           +D ++   +L      G L  A   +  + RR+    +I D  FC  L+R         +
Sbjct: 57  HDSRSYFMMLDILGRNGNLNIARNFLFSIERRSNGSVKIED-RFCNTLLRSYGNAGLFNE 115

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTIL 229
           A K+  +M  SG  P  IT+N ++  L KRG+   A ++ DEM    G  PD  T+N ++
Sbjct: 116 AIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAHSVFDEMCGTYGVTPDTYTFNILI 175

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA--IEG 287
           R    N    +   F+K+  R  C P ++TY  L++ +C+   +  A  V+  M   ++ 
Sbjct: 176 RGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKD 235

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
            SPD+VTY +LV   C + + D+A++V   ++SRG++PN ITYNTL+  L     +D + 
Sbjct: 236 LSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIK 295

Query: 348 KIL-DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           +IL   +      P   TYN L+N  C  G  D A+  F +M     QPD  TY+ ++  
Sbjct: 296 EILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRN 355

Query: 407 LCKEGMLNEALQLLH-------LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           LC+ G    A QL         LL    C+P +  YN + D L K G   KA  ++ Q+M
Sbjct: 356 LCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLM 415

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           + G + D  +++TLI G C+    E    LL  + +R        Y L+I+G  +  +  
Sbjct: 416 KKG-TQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPI 474

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +A + LE M+ S Y P  +VF +I+ ++  +    E+      +I+ K+
Sbjct: 475 LAYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKI 523



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 126/466 (27%), Positives = 223/466 (47%), Gaps = 16/466 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +++  N +L+++ + G   +A KL  +M      P      +L+  L++  R   A 
Sbjct: 93  VKIEDRFCNTLLRSYGNAGLFNEAIKLFSLMKSSGVSPSVITFNSLLLILLKRGRTNMAH 152

Query: 173 KVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            V   M  + GV PDT T+N+++ G CK   +        EMS   CEPDV+TYNT++  
Sbjct: 153 SVFDEMCGTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFNCEPDVVTYNTLVDG 212

Query: 232 MFDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           +   GK + A    K  ++K     P ++TYT L+   C +  I  A+ V ++M   G  
Sbjct: 213 LCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLK 272

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLS-RGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           P+ +TYN+L+   C+  K+D    ++   +  RG  P++ TYNTL+++    G +D   K
Sbjct: 273 PNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALK 332

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-------CQPDIVTYN 401
           +   M E    P   TY++LI  LC+ G  +RA   F+++  ++       C P +  YN
Sbjct: 333 MFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYN 392

Query: 402 TVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
            +   LCK G  ++A ++   L   G+   P   +Y TLI G  K+G  E    L   M+
Sbjct: 393 PIFDFLCKNGKTHKAERVFRQLMKKGTQDPP---SYKTLIIGHCKEGTFEAGYKLLLFML 449

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
                PD  T+  LI GF +  +   A   L+ + K     + S +  ++  L K+    
Sbjct: 450 RRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSILSELLKNDFAR 509

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +   + LMI  + + +  + +  ++ +   G+  +A+++ + L +
Sbjct: 510 ESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYD 555



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 106/427 (24%), Positives = 180/427 (42%), Gaps = 43/427 (10%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ--IPDFHFCINLIRGLIRIDRIEKA 171
           E D  T N ++   C  GK+  A  ++  M ++ +   PD      L+RG      I++A
Sbjct: 200 EPDVVTYNTLVDGLCRAGKVRIAHNVVKGMVKKMKDLSPDVVTYTTLVRGYCMKQEIDEA 259

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD-EMSVSGCEPDVITYNTILR 230
             V + MV  G  P+ ITYN ++ GLC+  +      +L   +   G  PD  TYNT++ 
Sbjct: 260 LVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEILGGAVGGRGFVPDTCTYNTLMN 319

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE---- 286
              D G F +A+  +K        P   TY++LI  +C++    RA ++ D ++ E    
Sbjct: 320 AQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQRGDFERAEQLFDKLSDEDILL 379

Query: 287 ---GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              GC+P +  YN + +F CK GK   A  V   L+ +G + +  +Y TL+      G +
Sbjct: 380 RDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKGTQ-DPPSYKTLIIGHCKEGTF 438

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           +A  K+L  M    + P   TY +LING  + G    A  +  +M+  +  P    ++++
Sbjct: 439 EAGYKLLLFMLRRDYVPDFETYVLLINGFLQKGEPILAYKTLERMLKSSYLPKTSVFHSI 498

Query: 404 LGALCKEGMLNEALQL-------------------LHLLNGSSC-------------SPC 431
           L  L K     E+                      + LL GS               +  
Sbjct: 499 LSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMRLLFGSGLRIKAFQIVELLYDNGY 558

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           ++    LI  + + G +  A  +    +E G + D      +I G C+  +  EA  L  
Sbjct: 559 MVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDINVCNVVIEGLCKMKRPLEAFGLYY 618

Query: 492 EIGKRGN 498
            + ++ N
Sbjct: 619 MLVEKSN 625



 Score = 72.4 bits (176), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 97/420 (23%), Positives = 164/420 (39%), Gaps = 80/420 (19%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +++ +C + ++ +A  + + M  R   P+      LI+GL  + + +K  ++L
Sbjct: 239 DVVTYTTLVRGYCMKQEIDEALVVFEEMVSRGLKPNDITYNTLIKGLCEVQKFDKIKEIL 298

Query: 176 QIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              V   G VPDT TYN ++   C  G    A+ +  +M     +PD  TY+ ++R +  
Sbjct: 299 GGAVGGRGFVPDTCTYNTLMNAQCDAGNFDEALKMFKKMKELKVQPDSATYSVLIRNLCQ 358

Query: 235 NGKFKQAIGFW-----KDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
            G F++A   +     +D L +  GC P +  Y  + + +CK     +A  V   +  +G
Sbjct: 359 RGDFERAEQLFDKLSDEDILLRDDGCTPLVAAYNPIFDFLCKNGKTHKAERVFRQLMKKG 418

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDA-------------------VLVINNLLSRGMEPNSI 328
            + D  +Y +L+   CK+G ++                     VL+IN  L +G EP  +
Sbjct: 419 -TQDPPSYKTLIIGHCKEGTFEAGYKLLLFMLRRDYVPDFETYVLLINGFLQKG-EP-IL 475

Query: 329 TYNTL--------------LHSLGS--------RGCWDAV-----DKILDIMNEASHSPT 361
            Y TL               HS+ S        R     V      KI   +N ++H+  
Sbjct: 476 AYKTLERMLKSSYLPKTSVFHSILSELLKNDFARESASFVVLMIDRKIRQNINLSTHTMR 535

Query: 362 VF--------TYNI---------------LINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
           +          + I               LI  +C+ G +  A    +  + K    DI 
Sbjct: 536 LLFGSGLRIKAFQIVELLYDNGYMVDMEELIGFICQNGKLLDAQKMLSFCLEKGHNVDIN 595

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
             N V+  LCK     EA  L ++L   S    L     L   L   G  E+A  +  +M
Sbjct: 596 VCNVVIEGLCKMKRPLEAFGLYYMLVEKSNHQQLSCLEGLRTALEAGGRSEEAKFVSKRM 655


>gi|449454139|ref|XP_004144813.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
 gi|449524964|ref|XP_004169491.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Cucumis sativus]
          Length = 611

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 214/401 (53%), Gaps = 3/401 (0%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  L+  L++ +       V + M+     P+ IT+N ++ GLCK G++  A  ++D+M 
Sbjct: 198 CNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMK 257

Query: 215 VSGCEPDVITYNTILR---TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           V G  P+V+TYNT++     M   GK  +A    K+ +     P  +T+ +LI+  CK  
Sbjct: 258 VWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDE 317

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            ++ A++V ++M  +G  P +VTYNSLVN  C +GK ++A ++++ +LS  ++PN ITYN
Sbjct: 318 NLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYN 377

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            L++    +   +   ++ D + +   +P V T+N L++G CK+G ++ A      M+ K
Sbjct: 378 ALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEK 437

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              P+  TYN ++   C+EG + E   LL+ +         +TYN LI    +K   +KA
Sbjct: 438 GFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKA 497

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             L  +M++ G+ P  +T+  L+ G+C    +  A++L K++ K G       Y ++I G
Sbjct: 498 ARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQG 557

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
            C+  K++ A  +L  M+     P+ T +  I +++ + G 
Sbjct: 558 YCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGF 598



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 190/363 (52%), Gaps = 12/363 (3%)

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           V++ N +L  +    +F      +K+ +R+   P LIT+  +I  +CK   + +A +V+D
Sbjct: 195 VLSCNPLLSALVKENEFGGVEFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVD 254

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQG---KYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           DM + G  P++VTYN+L++  CK G   K   A  ++  ++   + PNS+T+N L+    
Sbjct: 255 DMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFC 314

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
                 A  K+ + M      PTV TYN L+NGLC  G ++ A    ++M+S N +P+++
Sbjct: 315 KDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVI 374

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           TYN ++   CK+ +L EA +L   +     +P +IT+NTL+ G  K G ME+A +L   M
Sbjct: 375 TYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVM 434

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           +E G  P+  T+  LI GFCR  ++EE  +LL E+  RG K     Y ++I   C+ K+ 
Sbjct: 435 LEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEP 494

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL---------WQKLIEWKVF 569
             A ++++ M+    KP    ++ ++     +G    A  L         W  ++ + V 
Sbjct: 495 KKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVL 554

Query: 570 EKG 572
            +G
Sbjct: 555 IQG 557



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/358 (30%), Positives = 188/358 (52%), Gaps = 3/358 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRG---LIRIDRIEKASKVL 175
           T N ++   C  GKL  A  ++D M      P+      LI G   + R+ ++ KA  +L
Sbjct: 232 TFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGRVGKMYKADAIL 291

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV +   P+++T+N+++ G CK   + +A+ + +EM   G +P V+TYN+++  + + 
Sbjct: 292 KEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNE 351

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A     + L     P +ITY  LI   CK+  +  A E+ D++  +G +P+++T+
Sbjct: 352 GKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITF 411

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK GK ++A L+   +L +G  PN+ TYN L+      G  + V  +L+ M  
Sbjct: 412 NTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQC 471

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                   TYNILI+  C+     +A    ++M+ K  +P  +TYN +L   C EG L  
Sbjct: 472 RGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRA 531

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           AL L   +        ++TYN LI G  +KG +E A  L  +M+E G+ P+  T+  +
Sbjct: 532 ALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEII 589



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/369 (29%), Positives = 194/369 (52%), Gaps = 3/369 (0%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M RR   P+      +I GL ++ ++ KA  V+  M + G  P+ +TYN ++ G CK G+
Sbjct: 221 MIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDGYCKMGR 280

Query: 203 I---RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
           +     A A+L EM  +   P+ +T+N ++     +     A+  +++   +G  P ++T
Sbjct: 281 VGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVT 340

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           Y  L+  +C +  +  A  +LD+M      P+++TYN+L+N  CK+   ++A  + +N+ 
Sbjct: 341 YNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARELFDNIG 400

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            +G+ PN IT+NTLLH     G  +    +  +M E    P   TYN LI G C+ G ++
Sbjct: 401 KQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKME 460

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
              N  N+M  +  + D VTYN ++ A C++    +A +L+  +      P  +TYN L+
Sbjct: 461 EVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILL 520

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +G   +G +  A+ L  QM + G   + +T+  LI G+CR  ++E+A  LL E+ ++G  
Sbjct: 521 NGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLI 580

Query: 500 MRNSAYRLV 508
              + Y ++
Sbjct: 581 PNRTTYEII 589



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 206/431 (47%), Gaps = 9/431 (2%)

Query: 153 HFCIN-LIRGLIRIDRIEKASKVLQIMVMSGGVP-----DTITYNMMVGGLCKRGQIRSA 206
            FC N +I  ++ +  +E +  VL +               ++ N ++  L K  +    
Sbjct: 155 QFCANSIIADMLVLAYVENSKTVLGLEAFKRAGDYRYKLSVLSCNPLLSALVKENEFGGV 214

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
             +  EM      P++IT+NT++  +   GK  +A     D    G  P ++TY  LI+ 
Sbjct: 215 EFVYKEMIRRKISPNLITFNTVINGLCKVGKLNKAGDVVDDMKVWGFWPNVVTYNTLIDG 274

Query: 267 VCKQCGIAR---AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
            CK   + +   A  +L +M     SP+ VT+N L++  CK      A+ V   + S+G+
Sbjct: 275 YCKMGRVGKMYKADAILKEMVENKVSPNSVTFNVLIDGFCKDENLSAALKVFEEMQSQGL 334

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           +P  +TYN+L++ L + G  +    +LD M  ++  P V TYN LING CK  L++ A  
Sbjct: 335 KPTVVTYNSLVNGLCNEGKLNEAKVLLDEMLSSNLKPNVITYNALINGYCKKKLLEEARE 394

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F+ +  +   P+++T+NT+L   CK G + EA  L  ++      P   TYN LI G  
Sbjct: 395 LFDNIGKQGLTPNVITFNTLLHGYCKFGKMEEAFLLQKVMLEKGFLPNASTYNCLIVGFC 454

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           ++G ME+   L  +M   G+  D +T+  LI  +C   + ++A  L+ E+  +G K  + 
Sbjct: 455 REGKMEEVKNLLNEMQCRGVKADTVTYNILISAWCEKKEPKKAARLIDEMLDKGLKPSHL 514

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y ++++G C    +  A+ + + M       +   ++ +++     G  E+A  L  ++
Sbjct: 515 TYNILLNGYCMEGNLRAALNLRKQMEKEGRWANVVTYNVLIQGYCRKGKLEDANGLLNEM 574

Query: 564 IEWKVFEKGTT 574
           +E  +    TT
Sbjct: 575 LEKGLIPNRTT 585



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/295 (30%), Positives = 146/295 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC    L+ A K+ + M  +   P      +L+ GL    ++ +A  +L  M
Sbjct: 305 TFNVLIDGFCKDENLSAALKVFEEMQSQGLKPTVVTYNSLVNGLCNEGKLNEAKVLLDEM 364

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + S   P+ ITYN ++ G CK+  +  A  L D +   G  P+VIT+NT+L      GK 
Sbjct: 365 LSSNLKPNVITYNALINGYCKKKLLEEARELFDNIGKQGLTPNVITFNTLLHGYCKFGKM 424

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A    K  L KG  P   TY  LI   C++  +     +L++M   G   D VTYN L
Sbjct: 425 EEAFLLQKVMLEKGFLPNASTYNCLIVGFCREGKMEEVKNLLNEMQCRGVKADTVTYNIL 484

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C++ +   A  +I+ +L +G++P+ +TYN LL+     G   A   +   M +   
Sbjct: 485 ISAWCEKKEPKKAARLIDEMLDKGLKPSHLTYNILLNGYCMEGNLRAALNLRKQMEKEGR 544

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
              V TYN+LI G C+ G ++ A    N+M+ K   P+  TY  +   + ++G L
Sbjct: 545 WANVVTYNVLIQGYCRKGKLEDANGLLNEMLEKGLIPNRTTYEIIKEEMMEKGFL 599


>gi|8493575|gb|AAF75798.1|AC011000_1 Contains multiple PPR Repeats PF|01535 [Arabidopsis thaliana]
          Length = 514

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 133/491 (27%), Positives = 226/491 (46%), Gaps = 46/491 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR-------------- 164
           T   ++   C  G++  A  L+D M      PD      ++ G+ +              
Sbjct: 12  TFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKM 71

Query: 165 ---------------IDRI------EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
                          +DR+       KA  +   M   G  P+ +TYN M+ G C  G+ 
Sbjct: 72  DESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKW 131

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A  LL +M     +PDV+T++ ++      GK   A   +++ LR+   P  ITY+ +
Sbjct: 132 SDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSM 191

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ-----------GKYDDAV 312
           I+  CK   +  A  + D M  +GCSPDI+T N+L++  C+            G  + A 
Sbjct: 192 IDGFCKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQ 251

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            +   ++S G+ P+ +T NTLL  L   G  +   ++  +  ++       T NI+ING+
Sbjct: 252 DLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGM 311

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK   VD A + FN +     + D+VTYN ++G   KEG    A  +   +      P  
Sbjct: 312 CKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPST 371

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           +TYN+++DG  K+  +E+A  +   M+  G SPD +T  TLI G+C+A +V++ ++L  E
Sbjct: 372 VTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSE 431

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + +RG       Y  +IHG CK   ++ A  + E M+SS   PD   F +++  +     
Sbjct: 432 MCQRGLVADTITYNALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAE 491

Query: 553 TEEAYKLWQKL 563
            ++   + + L
Sbjct: 492 LQKGLTMLEDL 502



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/419 (28%), Positives = 211/419 (50%), Gaps = 11/419 (2%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+ GL R  R+ +A  ++  MV  G  PD +TY  +V G+CK G   SA+ +L +M  S 
Sbjct: 16  LMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGDTVSALNMLRKMDESQ 75

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            + +V+ Y+ I+  +  +G   +A   + +   KG  P ++TY  +I+  C     + A 
Sbjct: 76  IKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAE 135

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++L DM      PD+VT+++L+N   K+GK   A  +   +L R + P +ITY++++   
Sbjct: 136 QLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRNIFPTTITYSSMIDGF 195

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILIN-----------GLCKYGLVDRAINSFN 386
                 +    + D+M     SP + T N LI+           G C+ G V+ A + F 
Sbjct: 196 CKHSRLEDAKHMFDLMVSKGCSPDIITLNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQ 255

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M+S    PDIVT NT+L  LC+ G L +AL++  +   S       T N +I+G+ K  
Sbjct: 256 EMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKVFQKSKMDLDTATCNIIINGMCKGN 315

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +++A  L+  +  NG+  D +T+  LI  F +      A D+  E+  +G       Y 
Sbjct: 316 KVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYN 375

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++ G CK  +++ A Q+++ M+S    PD   FST++K     G  ++  +L+ ++ +
Sbjct: 376 SMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQ 434



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/402 (28%), Positives = 199/402 (49%), Gaps = 18/402 (4%)

Query: 112 FVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           F E  EK       T N ++  +CS GK +DA +L+  M  RN  PD      LI   ++
Sbjct: 103 FTEMHEKGIFPNVLTYNCMIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVK 162

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             ++  A ++ + M+     P TITY+ M+ G CK  ++  A  + D M   GC PD+IT
Sbjct: 163 EGKVSGAEELYREMLRRNIFPTTITYSSMIDGFCKHSRLEDAKHMFDLMVSKGCSPDIIT 222

Query: 225 YNTIL-------RTMFDN----GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
            NT++       R +       G    A   +++ +  G  P ++T   L+  +C+   +
Sbjct: 223 LNTLIDGCCRAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKL 282

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            +A+E+           D  T N ++N  CK  K D+A  + N+L   G+E + +TYN L
Sbjct: 283 EKALEMFKVFQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNIL 342

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +      G +   + I   M      P+  TYN +++G CK   ++ A    + MVS+ C
Sbjct: 343 IGVFVKEGNFLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGC 402

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD+VT++T++   CK G +++ L+L   +         ITYN LI G  K G +  A  
Sbjct: 403 SPDVVTFSTLIKGYCKAGRVDDGLELFSEMCQRGLVADTITYNALIHGFCKVGDLNGAQD 462

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           ++ +M+ +G+ PD IT R+++ G C   ++++ + +L+++ K
Sbjct: 463 IFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGLTMLEDLQK 504



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 149/309 (48%), Gaps = 35/309 (11%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +    ++  FC  G +  A  L   M      PD   C  L+ GL    ++EKA ++ ++
Sbjct: 232 RAKRHLIHGFCQVGNVNVAQDLFQEMISNGVSPDIVTCNTLLAGLCENGKLEKALEMFKV 291

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
              S    DT T N+++ G+CK  ++  A  L + + V+G E DV+TYN ++      G 
Sbjct: 292 FQKSKMDLDTATCNIIINGMCKGNKVDEAWDLFNSLPVNGVETDVVTYNILIGVFVKEGN 351

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A   + + L KG  P  +TY  +++  CKQ  +  A +++D M  EGCSPD+VT+++
Sbjct: 352 FLRAEDIYLEMLCKGIIPSTVTYNSMVDGFCKQNRLEEARQMVDSMVSEGCSPDVVTFST 411

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   CK G+ DD + + + +  RG+  ++ITY                           
Sbjct: 412 LIKGYCKAGRVDDGLELFSEMCQRGLVADTITY--------------------------- 444

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
                   N LI+G CK G ++ A + F +MVS    PD +T+ ++L  LC +  L + L
Sbjct: 445 --------NALIHGFCKVGDLNGAQDIFEEMVSSGVCPDTITFRSMLAGLCTKAELQKGL 496

Query: 418 QLLHLLNGS 426
            +L  L  S
Sbjct: 497 TMLEDLQKS 505



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 47/187 (25%), Positives = 90/187 (48%)

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           MV   C  ++VT+ T++  LC+EG + +AL L+  +      P  +TY T+++G+ K G 
Sbjct: 1   MVETGCPANVVTFTTLMNGLCREGRVLQALALVDRMVEEGHQPDAVTYGTIVNGMCKLGD 60

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
              A+ +  +M E+ I  + + +  ++   C+     +A ++  E+ ++G       Y  
Sbjct: 61  TVSALNMLRKMDESQIKANVVIYSAIVDRLCKDGNHIKAQNIFTEMHEKGIFPNVLTYNC 120

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +I G C   K   A Q+L  MI     PD   FS ++     +G    A +L+++++   
Sbjct: 121 MIDGYCSYGKWSDAEQLLRDMIERNIDPDVVTFSALINAFVKEGKVSGAEELYREMLRRN 180

Query: 568 VFEKGTT 574
           +F    T
Sbjct: 181 IFPTTIT 187


>gi|147810269|emb|CAN75824.1| hypothetical protein VITISV_004157 [Vitis vinifera]
          Length = 1512

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/451 (30%), Positives = 226/451 (50%), Gaps = 3/451 (0%)

Query: 114  ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
            E D  T   +++       + DA +L D M ++  + D      LI GL +  +   A K
Sbjct: 1013 EPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIK 1072

Query: 174  VLQIMVMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + +   M G    D  TY M++  LCK G    A+ +  EM  +G  PDV+ Y++++  +
Sbjct: 1073 LHE--KMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 1130

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               G+ K+A+ F+K+   +G    + TY  LI  + +          L+ M   G SPD 
Sbjct: 1131 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 1190

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             T+  L++  CK+GK  +A  ++  +  +G EP+ +TYNTL++ L   G  +   K+ + 
Sbjct: 1191 FTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 1250

Query: 353  MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
            + +      VF+YNILING CK   +D A   F +M  K  +P  VTYNT++GALC+ G 
Sbjct: 1251 LADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGR 1310

Query: 413  LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            +  A +L   +        L TY  L+DGL K G +E+AM L+  + +    P+      
Sbjct: 1311 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSI 1370

Query: 473  LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
            L+ G CRA ++EEA     EI K G +    AY ++I+GLC    +  A+++L  M    
Sbjct: 1371 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 1430

Query: 533  YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              PD   F+ I++ +  +    EA +L +++
Sbjct: 1431 CLPDSITFNVIIQNLLKENEIHEAIQLLEEM 1461



 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 220/429 (51%), Gaps = 1/429 (0%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D KT   ++   C   K   A KL + M    +   F + + +I  L +     +A  + 
Sbjct: 1050 DAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGM-IIDALCKDGMTTEALDMF 1108

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              M+ +G +PD + Y+ ++ GLC+ G+++ A+    EM   G   DV TYN+++  +   
Sbjct: 1109 SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA 1168

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            G +K+   F    + +G  P   T+TILI+ +CK+  +  A ++L+ M  +G  PDI+TY
Sbjct: 1169 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTY 1228

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            N+L+N  C  G+ +DA  +  +L  RG++ N  +YN L++        D   +  + M  
Sbjct: 1229 NTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRP 1288

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                P+  TYN LI  LC+ G V  A   F +M +      + TY  +L  LCK G L E
Sbjct: 1289 KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEE 1348

Query: 416  ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            A+ L   +  +   P +  ++ L+DG+ + G +E+A   + ++ +NG+ PD I +  LI 
Sbjct: 1349 AMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILIN 1408

Query: 476  GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            G C    + EAV LL ++ ++G    +  + ++I  L K  ++  AIQ+LE M +  + P
Sbjct: 1409 GLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSP 1468

Query: 536  DDTVFSTIV 544
            D+ V S ++
Sbjct: 1469 DEAVTSMLL 1477



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 117/382 (30%), Positives = 199/382 (52%), Gaps = 1/382 (0%)

Query: 182  GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
            G  PD +T   +V G+     I  A+ L DEM+  G   D  TY  ++  +    K   A
Sbjct: 1011 GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLA 1070

Query: 242  IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
            I    ++++  C   + TY ++I+ +CK      A+++  +M   G  PD+V Y+SL++ 
Sbjct: 1071 IKL-HEKMKGNCKGDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 1129

Query: 302  SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             C+ G+  +A+     +  RG+  +  TYN+L+H L   G W  V   L++M +   SP 
Sbjct: 1130 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 1189

Query: 362  VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             FT+ ILI+GLCK G V  A      M  K  +PDI+TYNT++  LC  G L +A +L  
Sbjct: 1190 AFTFTILIDGLCKEGKVGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 1249

Query: 422  LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
             L        + +YN LI+G  K   +++A   + +M   G+ P  +T+ TLI   C++ 
Sbjct: 1250 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSG 1309

Query: 482  QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            +V  A  L  E+   G  ++ S Y +++ GLCK+  ++ A+ + + +  + +KP+  VFS
Sbjct: 1310 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFS 1369

Query: 542  TIVKKVADDGMTEEAYKLWQKL 563
             ++  +   G  EEA+K + ++
Sbjct: 1370 ILLDGMCRAGKLEEAWKQFDEI 1391



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 226/460 (49%), Gaps = 6/460 (1%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            ++ D  T N ++   CS   +     +     +R   PD      L++G+   + I  A 
Sbjct: 977  IQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAV 1036

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++   M   G + D  TY +++ GLCK  +   AI L ++M    C+ DV TY  I+  +
Sbjct: 1037 QLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMK-GNCKGDVFTYGMIIDAL 1095

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              +G   +A+  + + +  G  P ++ Y+ L++ +C+   +  A+E   +M   G S D+
Sbjct: 1096 CKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADV 1155

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             TYNSL++   + G + +    +N ++ RG  P++ T+  L+  L   G      +IL++
Sbjct: 1156 YTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILEL 1215

Query: 353  MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
            M      P + TYN L+NGLC  G ++ A   F  +  +  + ++ +YN ++   CK+  
Sbjct: 1216 MRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQK 1275

Query: 413  LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            ++EA +    +      P  +TYNTLI  L + G +  A  L+ +M   G      T+  
Sbjct: 1276 IDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV 1335

Query: 473  LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
            L+ G C+   +EEA+DL + I K  +K     + +++ G+C++ K++ A +  + +  + 
Sbjct: 1336 LLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNG 1395

Query: 533  YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
             +PD   ++ ++  + + GM  EA KL      W++ EKG
Sbjct: 1396 LEPDTIAYNILINGLCNKGMLSEAVKLL-----WQMEEKG 1430



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 94/323 (29%), Positives = 164/323 (50%), Gaps = 2/323 (0%)

Query: 109  DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDR 167
            +G  +  D  T N ++      G   + +  +++M  R   PD F F I LI GL +  +
Sbjct: 1147 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI-LIDGLCKEGK 1205

Query: 168  IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
            + +A ++L++M   G  PD +TYN ++ GLC  GQ+  A  L + ++  G + +V +YN 
Sbjct: 1206 VGEAQQILELMRHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 1265

Query: 228  ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
            ++     + K  +A  F+++   KG  P  +TY  LI  +C+   +  A ++  +M   G
Sbjct: 1266 LINGYCKDQKIDEAFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 1325

Query: 288  CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
                + TY  L++  CK G  ++A+ +  ++     +PN   ++ LL  +   G  +   
Sbjct: 1326 QFLKLSTYCVLLDGLCKNGHLEEAMDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 1385

Query: 348  KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            K  D +++    P    YNILINGLC  G++  A+    QM  K C PD +T+N ++  L
Sbjct: 1386 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 1445

Query: 408  CKEGMLNEALQLLHLLNGSSCSP 430
             KE  ++EA+QLL  +   + SP
Sbjct: 1446 LKENEIHEAIQLLEEMRNRNFSP 1468



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 106/400 (26%), Positives = 177/400 (44%), Gaps = 38/400 (9%)

Query: 198  CKRGQIR--SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
            C+ G I+   AI L D    S   P   T+N +L ++   G +      ++     G  P
Sbjct: 920  CRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYSTVFPMYRKINDVGIQP 979

Query: 256  YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
             L T  ILI   C    +     V       G  PD VT  +LV     +    DAV + 
Sbjct: 980  DLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLVKGVWMENGIPDAVQLF 1039

Query: 316  NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
            + +  +G+  ++ TY  L++ L          K+ + M + +    VFTY ++I+ LCK 
Sbjct: 1040 DEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDALCKD 1098

Query: 376  GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
            G+   A++ F++M+     PD+V Y++++  LC+ G L EAL+    + G   S  + TY
Sbjct: 1099 GMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTY 1158

Query: 436  NTLIDGLAKKGCMEKAMVLYGQMMENGISPDD---------------------------- 467
            N+LI GL++ G  ++       M++ G SPD                             
Sbjct: 1159 NSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMRH 1218

Query: 468  -------ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
                   +T+ TL+ G C   Q+E+A  L + +  RG K+   +Y ++I+G CK +K+D 
Sbjct: 1219 KGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDE 1278

Query: 521  AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            A +  E M     KP    ++T++  +   G    A KL+
Sbjct: 1279 AFRFFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLF 1318



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 77/312 (24%), Positives = 135/312 (43%), Gaps = 38/312 (12%)

Query: 287  GCSPDIVTYNSLVNFSCKQG--KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            G    +  +   V   C+ G  K +DA+ + +  L     P + T+N LL S+   G + 
Sbjct: 904  GTKASLSPFERYVRDQCRFGIIKLNDAIKLFDRSLCSEPMPCTDTFNHLLASVAKLGYYS 963

Query: 345  AVDKILDIMNEASHSPTVFTYNILINGLC----------------KYGL----------- 377
             V  +   +N+    P ++T NILI+  C                K G            
Sbjct: 964  TVFPMYRKINDVGIQPDLYTLNILIHCCCSLRAVGCGFGVFGGFLKRGFEPDAVTVTTLV 1023

Query: 378  --------VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
                    +  A+  F++M  K    D  TY  ++  LCK      A++L   + G +C 
Sbjct: 1024 KGVWMENGIPDAVQLFDEMTKKGLLGDAKTYGILINGLCKARKTGLAIKLHEKMKG-NCK 1082

Query: 430  PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
              + TY  +ID L K G   +A+ ++ +M+  GI PD + + +L+ G CR  +++EA++ 
Sbjct: 1083 GDVFTYGMIIDALCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEF 1142

Query: 490  LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             KE+  RG       Y  +IHGL ++         L LM+   + PD   F+ ++  +  
Sbjct: 1143 FKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCK 1202

Query: 550  DGMTEEAYKLWQ 561
            +G   EA ++ +
Sbjct: 1203 EGKVGEAQQILE 1214



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 53/205 (25%), Positives = 102/205 (49%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N ++   C  G++  A KL   M    Q         L+ GL +   +E+A  + Q +
Sbjct: 1297 TYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAMDLFQSI 1356

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              +   P+   +++++ G+C+ G++  A    DE+S +G EPD I YN ++  + + G  
Sbjct: 1357 KKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGML 1416

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             +A+        KGC P  IT+ ++I+ + K+  I  AI++L++M     SPD    + L
Sbjct: 1417 SEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSML 1476

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGM 323
            +  +    ++  A++ + N L +G+
Sbjct: 1477 LCLASFDPQWHAALVSLPNALQKGV 1501


>gi|449520325|ref|XP_004167184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 229/444 (51%), Gaps = 8/444 (1%)

Query: 128 CSRGKLT--DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
           C  G +T   A     +M R    P      +L+ GL +I    +   +   M +SG   
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D  T N+++  LC   ++R   A    +   G  P+++TYNT+++ +    +  +A   +
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAI----EVLDDMAIE--GCSPDIVTYNSLV 299
               + GC P ++TY  LI+ +C    I  A+    E+L+D++     C P+++TYN +V
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK G+ D+A  +   + ++GM P+ I+YN+L+H     G W+   ++LD M +    
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQGLQ 282

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P + T+N+LI+ LCK G V  A      M+     PD+VTYN+++   C  G LN A +L
Sbjct: 283 PDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAREL 342

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +    C P +I+YN LI+G +K   +E+AM LY +M+  G  P+ IT+ +L+ G   
Sbjct: 343 FVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFL 402

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A +V++A  L   +   G    +  Y + + GLCK+  +  A+++   + SS +K +   
Sbjct: 403 AGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIEN 462

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
            + ++  +   G  E A++L++KL
Sbjct: 463 LNCLIDGLCKAGKLETAWELFEKL 486



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 238/462 (51%), Gaps = 6/462 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  T N +L   C+  +L +       + RR   P+      LI+GL    RI +A+
Sbjct: 100 LSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEAT 159

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM--SVS----GCEPDVITYN 226
           ++   M   G  PD +TY  ++ GLC  G I  A+ L  EM   +S     C+P+VITYN
Sbjct: 160 RLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYN 219

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            I+  +   G+  +A   +++   +G  P +I+Y  LI   C       +  +LD+M  +
Sbjct: 220 IIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQ 279

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G  PD+VT+N L++  CK+GK  +A  ++  ++  G+ P+ +TYN+L+      G  ++ 
Sbjct: 280 GLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSA 339

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            ++   M      P V +YN+LING  K   V+ A+  +N+M+    +P+++TY+++L  
Sbjct: 340 RELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKG 399

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           +   G +++A +L  ++     +    TY   +DGL K  C+ +AM L+ ++  +    +
Sbjct: 400 IFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLE 459

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
                 LI G C+A ++E A +L +++   G++     Y ++IHG C+  +VD A  +++
Sbjct: 460 IENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQ 519

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            M ++   PD   ++T+++   +    EE  +L  ++ +  V
Sbjct: 520 KMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDV 561



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 116/368 (31%), Positives = 195/368 (52%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           ++ GL ++ R ++A ++ + M   G +P  I+YN ++ G C  G+   +  LLDEM   G
Sbjct: 221 IVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCAGKWEESKRLLDEMLDQG 280

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +PD++T+N ++ T+   GK  +A       +  G  P L+TY  LIE  C    +  A 
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAR 340

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E+   M  +GC PD+++YN L+N   K  K ++A+ + N +L  G  PN ITY++LL  +
Sbjct: 341 ELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI 400

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D   K+  +M     +   +TY I ++GLCK   +  A+  F ++ S N + +I
Sbjct: 401 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEI 460

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
              N ++  LCK G L  A +L   L+     P ++TY  +I G  ++G ++KA VL  +
Sbjct: 461 ENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQK 520

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M  NG +PD IT+ TL+ GF  ++++EE V LL  + ++          +V+  L K +K
Sbjct: 521 MEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK 580

Query: 518 VDMAIQVL 525
               + +L
Sbjct: 581 YQECLHLL 588



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 223/451 (49%), Gaps = 6/451 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C   ++++A++L   M +    PD      LI+GL     I  A K+ Q M
Sbjct: 141 TYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEM 200

Query: 179 VMS------GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +           P+ ITYN++V GLCK G+   A  L +EM   G  P +I+YN+++   
Sbjct: 201 LNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGF 260

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK++++     + L +G  P ++T+ +LI+ +CK+  +  A ++L  M   G  PD+
Sbjct: 261 CCAGKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDL 320

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYNSL+   C  G  + A  +  ++ S+G EP+ I+YN L++        +   K+ + 
Sbjct: 321 VTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNE 380

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P V TY+ L+ G+   G VD A   F+ M +     +  TY   L  LCK   
Sbjct: 381 MLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDC 440

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L EA++L   L  S+    +   N LIDGL K G +E A  L+ ++   G  P+ +T+  
Sbjct: 441 LFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTI 500

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I GFCR  QV++A  L++++   G       Y  ++ G  +S K++  +Q+L  M    
Sbjct: 501 MIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKD 560

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             PD    S +V  ++ D   +E   L  + 
Sbjct: 561 VSPDAITCSIVVDMLSKDEKYQECLHLLPRF 591



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 110/404 (27%), Positives = 197/404 (48%), Gaps = 29/404 (7%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A     +M+ S   P   ++N ++ GL K        +L ++M +SG   D  T N +L 
Sbjct: 53  ALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILLN 112

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            + +  + ++    +   LR+G  P ++TY  LI+ +C +  I+ A  +   M   GC+P
Sbjct: 113 CLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCTP 172

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+VTY +L+   C  G  + A+ +   +L      N I+                     
Sbjct: 173 DVVTYGTLIKGLCGTGNINIALKLHQEML------NDIS--------------------- 205

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
               E +  P V TYNI+++GLCK G  D A   F +M ++   P I++YN+++   C  
Sbjct: 206 --RYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPSIISYNSLIHGFCCA 263

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G   E+ +LL  +      P ++T+N LID L K+G + +A  L G M+E+GI PD +T+
Sbjct: 264 GKWEESKRLLDEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTY 323

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +LI GFC    +  A +L   +  +G +    +Y ++I+G  K+ KV+ A+++   M+ 
Sbjct: 324 NSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLL 383

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
              +P+   + +++K +   G  ++A KL+  +    + E   T
Sbjct: 384 VGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYT 427



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 84/308 (27%), Positives = 149/308 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++   C  GK+ +A KL+ +M     +PD     +LI G   +  +  A 
Sbjct: 281 LQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSAR 340

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M   G  PD I+YN+++ G  K  ++  A+ L +EM + G  P+VITY+++L+ +
Sbjct: 341 ELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGI 400

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F  GK   A   +      G      TY I ++ +CK   +  A+++  ++       +I
Sbjct: 401 FLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEI 460

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
              N L++  CK GK + A  +   L + G EPN +TY  ++H     G  D  + ++  
Sbjct: 461 ENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQK 520

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M     +P + TYN L+ G  +   ++  +   ++M  K+  PD +T + V+  L K+  
Sbjct: 521 MEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEK 580

Query: 413 LNEALQLL 420
             E L LL
Sbjct: 581 YQECLHLL 588



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 6/208 (2%)

Query: 83  HVLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +V+  +  L+G+ +  K  D     S+  + G  +  +  T    L   C    L +A K
Sbjct: 389 NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG--IAENSYTYGIFLDGLCKNDCLFEAMK 446

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L   +   N   +      LI GL +  ++E A ++ + +   G  P+ +TY +M+ G C
Sbjct: 447 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 506

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           + GQ+  A  L+ +M  +GC PD+ITYNT++R  +++ K ++ +       +K   P  I
Sbjct: 507 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 566

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIE 286
           T +I+++ + K       + +L    I+
Sbjct: 567 TCSIVVDMLSKDEKYQECLHLLPRFPIQ 594


>gi|18391414|ref|NP_563911.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75167758|sp|Q9ASZ8.1|PPR37_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g12620
 gi|13605505|gb|AAK32746.1|AF361578_1 At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|24111307|gb|AAN46777.1| At1g12620/T12C24_25 [Arabidopsis thaliana]
 gi|332190781|gb|AEE28902.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 621

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 231/444 (52%), Gaps = 1/444 (0%)

Query: 123 ILQNFCSR-GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           I+ N C R  KL+ A   +  + +    PD      LI GL    R+ +A +++  MV  
Sbjct: 112 IMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEM 171

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P  IT N +V GLC  G++  A+ L+D M  +G +P+ +TY  +L+ M  +G+   A
Sbjct: 172 GHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALA 231

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   +    +      + Y+I+I+ +CK   +  A  + ++M I+G   DI+ Y +L+  
Sbjct: 232 MELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRG 291

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G++DD   ++ +++ R + P+ + ++ L+      G     +++   M +   SP 
Sbjct: 292 FCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPD 351

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TY  LI+G CK   +D+A +  + MVSK C P+I T+N ++   CK  ++++ L+L  
Sbjct: 352 TVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFR 411

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++        +TYNTLI G  + G +E A  L+ +M+   + PD ++++ L+ G C   
Sbjct: 412 KMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNG 471

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           + E+A+++ ++I K   ++    Y ++IHG+C + KVD A  +   +     KPD   ++
Sbjct: 472 EPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYN 531

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++  +   G   EA  L++K+ E
Sbjct: 532 IMIGGLCKKGSLSEADLLFRKMEE 555



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 120/450 (26%), Positives = 221/450 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + ++   C  G++++A +L+D M      P       L+ GL    ++  A  
Sbjct: 139 EPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVL 198

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV +G  P+ +TY  ++  +CK GQ   A+ LL +M     + D + Y+ I+  + 
Sbjct: 199 LIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLC 258

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +G    A   + +   KG    +I YT LI   C         ++L DM     +PD+V
Sbjct: 259 KDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVV 318

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            +++L++   K+GK  +A  +   ++ RG+ P+++TY +L+         D  + +LD+M
Sbjct: 319 AFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLM 378

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P + T+NILING CK  L+D  +  F +M  +    D VTYNT++   C+ G L
Sbjct: 379 VSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGVVADTVTYNTLIQGFCELGKL 438

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             A +L   +      P +++Y  L+DGL   G  EKA+ ++ ++ ++ +  D   +  +
Sbjct: 439 EVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALEIFEKIEKSKMELDIGIYNII 498

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C A +V++A DL   +  +G K     Y ++I GLCK   +  A  +   M    +
Sbjct: 499 IHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLCKKGSLSEADLLFRKMEEDGH 558

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            P+   ++ +++    +G   ++ KL +++
Sbjct: 559 SPNGCTYNILIRAHLGEGDATKSAKLIEEI 588



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 206/400 (51%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A  + Q M  S   P  I ++ +   + +  Q    + L  +M + G   ++ T + +
Sbjct: 54  DDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQMELKGIAHNLYTLSIM 113

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +       K   A       ++ G  P  +T++ LI  +C +  ++ A+E++D M   G 
Sbjct: 114 INCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMVEMGH 173

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P ++T N+LVN  C  GK  DAVL+I+ ++  G +PN +TY  +L  +   G      +
Sbjct: 174 KPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAME 233

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M E         Y+I+I+GLCK G +D A N FN+M  K  + DI+ Y T++   C
Sbjct: 234 LLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFC 293

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G  ++  +LL  +     +P ++ ++ LID   K+G + +A  L+ +M++ GISPD +
Sbjct: 294 YAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTV 353

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +LI GFC+ +Q+++A  +L  +  +G       + ++I+G CK+  +D  +++   M
Sbjct: 354 TYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKM 413

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
                  D   ++T+++   + G  E A +L+Q+++  +V
Sbjct: 414 SLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRV 453



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/440 (27%), Positives = 212/440 (48%), Gaps = 6/440 (1%)

Query: 77  EWSSESHVLAVNKKLRGLTITKKSHDPSL---PSSDGPFVENDEKTNNKILQNFCSRGKL 133
           E   +  ++ +N  + GL +  K  D  L      +  F  N E T   +L+  C  G+ 
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPN-EVTYGPVLKVMCKSGQT 228

Query: 134 TDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
             A +L+  M  R  ++    + I +I GL +   ++ A  +   M + G   D I Y  
Sbjct: 229 ALAMELLRKMEERKIKLDAVKYSI-IIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTT 287

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++ G C  G+      LL +M      PDV+ ++ ++      GK ++A    K+ +++G
Sbjct: 288 LIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRG 347

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P  +TYT LI+  CK+  + +A  +LD M  +GC P+I T+N L+N  CK    DD +
Sbjct: 348 ISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGL 407

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            +   +  RG+  +++TYNTL+      G  +   ++   M      P + +Y IL++GL
Sbjct: 408 ELFRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGL 467

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           C  G  ++A+  F ++     + DI  YN ++  +C    +++A  L   L      P +
Sbjct: 468 CDNGEPEKALEIFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDV 527

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
            TYN +I GL KKG + +A +L+ +M E+G SP+  T+  LI          ++  L++E
Sbjct: 528 KTYNIMIGGLCKKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEE 587

Query: 493 IGKRGNKMRNSAYRLVIHGL 512
           I + G  +  S  ++V+  L
Sbjct: 588 IKRCGFSVDASTVKMVVDML 607



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/431 (25%), Positives = 210/431 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK++DA  LID M      P+      +++ + +  +   A ++L+ M
Sbjct: 179 TLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTALAMELLRKM 238

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                  D + Y++++ GLCK G + +A  L +EM + G + D+I Y T++R     G++
Sbjct: 239 EERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLIRGFCYAGRW 298

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
                  +D +++   P ++ ++ LI+   K+  +  A E+  +M   G SPD VTY SL
Sbjct: 299 DDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGISPDTVTYTSL 358

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+ + D A  +++ ++S+G  PN  T+N L++        D   ++   M+    
Sbjct: 359 IDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLELFRKMSLRGV 418

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TYN LI G C+ G ++ A   F +MVS+  +PDIV+Y  +L  LC  G   +AL+
Sbjct: 419 VADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCDNGEPEKALE 478

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +  S     +  YN +I G+     ++ A  L+  +   G+ PD  T+  +I G C
Sbjct: 479 IFEKIEKSKMELDIGIYNIIIHGMCNASKVDDAWDLFCSLPLKGVKPDVKTYNIMIGGLC 538

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +   + EA  L +++ + G+      Y ++I           + +++E +    +  D +
Sbjct: 539 KKGSLSEADLLFRKMEEDGHSPNGCTYNILIRAHLGEGDATKSAKLIEEIKRCGFSVDAS 598

Query: 539 VFSTIVKKVAD 549
               +V  ++D
Sbjct: 599 TVKMVVDMLSD 609



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 213/439 (48%), Gaps = 19/439 (4%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
           R +L D S+L  ++AR  Q   +   ++L +                 M + G   +  T
Sbjct: 69  RPRLIDFSRLFSVVARTKQ---YDLVLDLCKQ----------------MELKGIAHNLYT 109

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
            ++M+   C+  ++  A + + ++   G EPD +T++T++  +   G+  +A+      +
Sbjct: 110 LSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGRVSEALELVDRMV 169

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
             G  P LIT   L+  +C    ++ A+ ++D M   G  P+ VTY  ++   CK G+  
Sbjct: 170 EMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGPVLKVMCKSGQTA 229

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A+ ++  +  R ++ +++ Y+ ++  L   G  D    + + M        +  Y  LI
Sbjct: 230 LAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKGFKADIIIYTTLI 289

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
            G C  G  D        M+ +   PD+V ++ ++    KEG L EA +L   +     S
Sbjct: 290 RGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAEELHKEMIQRGIS 349

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  +TY +LIDG  K+  ++KA  +   M+  G  P+  T   LI G+C+A+ +++ ++L
Sbjct: 350 PDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGYCKANLIDDGLEL 409

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            +++  RG       Y  +I G C+  K+++A ++ + M+S R +PD   +  ++  + D
Sbjct: 410 FRKMSLRGVVADTVTYNTLIQGFCELGKLEVAKELFQEMVSRRVRPDIVSYKILLDGLCD 469

Query: 550 DGMTEEAYKLWQKLIEWKV 568
           +G  E+A ++++K+ + K+
Sbjct: 470 NGEPEKALEIFEKIEKSKM 488



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/376 (26%), Positives = 175/376 (46%), Gaps = 35/376 (9%)

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           ++Y   LR+   + K   A+  +++  R    P LI ++ L   V +       +++   
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M ++G + ++ T + ++N  C+  K   A   +  ++  G EP+++T++TL++ L   G 
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                +++D M E  H PT+ T N L+NGLC  G V  A+   ++MV    QP+ VTY  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           VL  +CK G    A++LL  +         + Y+ +IDGL K G ++ A  L+ +M   G
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 463 ISPDDITHRTLIWGFCRA-----------------------------------DQVEEAV 487
              D I + TLI GFC A                                    ++ EA 
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKITPDVVAFSALIDCFVKEGKLREAE 337

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +L KE+ +RG       Y  +I G CK  ++D A  +L+LM+S    P+   F+ ++   
Sbjct: 338 ELHKEMIQRGISPDTVTYTSLIDGFCKENQLDKANHMLDLMVSKGCGPNIRTFNILINGY 397

Query: 548 ADDGMTEEAYKLWQKL 563
               + ++  +L++K+
Sbjct: 398 CKANLIDDGLELFRKM 413



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 72/276 (26%), Positives = 142/276 (51%)

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V+Y   +       K DDAV +   +      P  I ++ L   +     +D V  +   
Sbjct: 38  VSYRERLRSGIVDIKEDDAVDLFQEMTRSRPRPRLIDFSRLFSVVARTKQYDLVLDLCKQ 97

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M     +  ++T +I+IN  C+   +  A ++  +++    +PD VT++T++  LC EG 
Sbjct: 98  MELKGIAHNLYTLSIMINCCCRCRKLSLAFSAMGKIIKLGYEPDTVTFSTLINGLCLEGR 157

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EAL+L+  +      P LIT N L++GL   G +  A++L  +M+E G  P+++T+  
Sbjct: 158 VSEALELVDRMVEMGHKPTLITLNALVNGLCLNGKVSDAVLLIDRMVETGFQPNEVTYGP 217

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++   C++ Q   A++LL+++ +R  K+    Y ++I GLCK   +D A  +   M    
Sbjct: 218 VLKVMCKSGQTALAMELLRKMEERKIKLDAVKYSIIIDGLCKDGSLDNAFNLFNEMEIKG 277

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +K D  +++T+++     G  ++  KL + +I+ K+
Sbjct: 278 FKADIIIYTTLIRGFCYAGRWDDGAKLLRDMIKRKI 313


>gi|302755296|ref|XP_002961072.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
 gi|300172011|gb|EFJ38611.1| hypothetical protein SELMODRAFT_75621 [Selaginella moellendorffii]
          Length = 628

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 138/500 (27%), Positives = 249/500 (49%), Gaps = 19/500 (3%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDPSLPSSD---GPFVENDEKTNNKILQNFCSRGKLTDAS 137
           E  ++  N  + GL +  +  D  L   +     F  N    +  ++ N C R +L  A 
Sbjct: 77  EPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYSTLVIWN-CRRRRLDQAR 135

Query: 138 KLIDIMARRNQIPDFHFCINLIRGL--IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
            LI  M  R  + +    I+ I G    R        +    M+ SG +PD +TYN  + 
Sbjct: 136 GLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDGDEMIESGRIPDVVTYNTFIS 195

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
           GLCK G++   + +L+EM   G  PDV+T+ +I+  +    +   A   +K  L +GC P
Sbjct: 196 GLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVP 255

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAI--EGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
             +TY+I+++ + +   +    EVL+ M     GC  ++ T+N+ +   C+ GK+  A  
Sbjct: 256 DSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALCRSGKFPLAKN 315

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRG----CWDAVDKILDIMNEASHSPTVFTYNILI 369
           ++  ++  G  PN ++YN ++  L   G     W    K+LD        P V  +N LI
Sbjct: 316 ILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLD---SGCCKPDVIFFNTLI 372

Query: 370 NGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           +G CK G + +A     +M +KN C PD+VTYNT++    K G L +A  LL  +    C
Sbjct: 373 SGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQEMQAVGC 432

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P ++TY  LI+G AK G  E+A  L+ +M   G  PD IT+ T++  F +A  + +A  
Sbjct: 433 KPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAGMMSKAEG 492

Query: 489 LLKEIGKRGNKMRNSA--YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + +++  + +     A  YR++I G C+++  +  + +L+ M +  +  D   ++ ++ K
Sbjct: 493 VYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYTYNVLIAK 552

Query: 547 VAD-DGMTEEAYKLWQKLIE 565
           +A+ + +  +A  ++Q++++
Sbjct: 553 LAETEEVPSKALAVYQQMLD 572



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/398 (30%), Positives = 203/398 (51%), Gaps = 12/398 (3%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  +G     +TY  ++ GLCK G + +A ALL +M+ +GC P+V+TY  ++  +    +
Sbjct: 1   MAANGYDASVVTYTTLIDGLCKSGDLDAAQALLQKMADAGCAPNVVTYTALIDGLCKARR 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              AI   K  LR GC P L+TY  LI  +C    +  A  VL ++   G +P+ +TY++
Sbjct: 61  PHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQELVRNGFAPNHITYST 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC----WDAVDKILDIM 353
           LV ++C++ + D A  +I  ++ RG   N + Y   +       C    ++  D   D M
Sbjct: 121 LVIWNCRRRRLDQARGLIREMILRGSVCNLVVYIDCIFGFCEARCQSSRYECRDG--DEM 178

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E+   P V TYN  I+GLCK G +D+ +    +M      PD+VT+ +++  LCK   +
Sbjct: 179 IESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRI 238

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA--MVLYGQMMENGISPDDITHR 471
           ++A Q+   +    C P  +TY+ ++D L++   ++    ++ + Q M+ G   +  TH 
Sbjct: 239 DDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHN 298

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
             I   CR+ +   A ++L  + + G+     +Y  VI GLCKS  VD A ++   M+ S
Sbjct: 299 AFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDS 358

Query: 532 R-YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              KPD   F+T++      G   +A++L   LIE K 
Sbjct: 359 GCCKPDVIFFNTLISGFCKAGRLSQAHQL---LIEMKA 393



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 121/425 (28%), Positives = 203/425 (47%), Gaps = 42/425 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N  +   C  GKL    ++++ M R    PD     ++I GL + +RI+ A +V 
Sbjct: 186 DVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGIPPDVVTFCSIISGLCKANRIDDAFQVF 245

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV--SGCEPDVITYNTILRTMF 233
           + M+  G VPD++TY++M+  L +  ++ +   +L+ M    +GC  +V T+N  +  + 
Sbjct: 246 KGMLERGCVPDSLTYSIMLDNLSRANRLDTVDEVLEHMQAMKAGCVMEVYTHNAFIGALC 305

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC-SPDI 292
            +GKF  A       +  G  P L++Y  +I+ +CK   +  A ++   M   GC  PD+
Sbjct: 306 RSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDV 365

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGM-EPNSITYNTLLHSLGSRGCWDAVDKILD 351
           + +N+L++  CK G+   A  ++  + ++ +  P+ +TYNTL+      G       +L 
Sbjct: 366 IFFNTLISGFCKAGRLSQAHQLLIEMKAKNICVPDVVTYNTLIDGQSKFGSLKQAKLLLQ 425

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M      P V TY  LING  K+G+ + A + F++M +K C PDI+TYNTVL A  K G
Sbjct: 426 EMQAVGCKPNVVTYAALINGYAKHGMYEEAESLFDEMSAKGCFPDIITYNTVLSAFSKAG 485

Query: 412 MLNEALQLLHLLNG--SSCSPCLITYNTLIDGLAKKGCME-------------------- 449
           M+++A  +   L    S CSP  ITY  LIDG  +    E                    
Sbjct: 486 MMSKAEGVYQQLKNKTSYCSPDAITYRILIDGYCRAEDTEQGLTLLQEMTARGWSCDSYT 545

Query: 450 ----------------KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
                           KA+ +Y QM++    P      +L+  F R   V  A  +++E+
Sbjct: 546 YNVLIAKLAETEEVPSKALAVYQQMLDQDCVPSASIFNSLVRLFLRTGDVNSARSMVQEM 605

Query: 494 GKRGN 498
            ++G+
Sbjct: 606 NEKGH 610


>gi|224123318|ref|XP_002319049.1| predicted protein [Populus trichocarpa]
 gi|222857425|gb|EEE94972.1| predicted protein [Populus trichocarpa]
          Length = 585

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 121/432 (28%), Positives = 211/432 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +L   CS+ K+ DA KL D + +    P       +I+GL +I     A ++L+ M
Sbjct: 143 TFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKM 202

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD + YN ++  LCK  +   A+    EM   G  P+V+TY++IL    + G+ 
Sbjct: 203 EEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQL 262

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +K  + +   P  +T+TIL++ +CK+  I  A  V + M   G  PD  TY++L
Sbjct: 263 NEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSAL 322

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C Q + D+A  + + ++ +G  P+   YN L++        +    +L  M +   
Sbjct: 323 MDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDL 382

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   TY+ L+ G C+ G    A   F +M S    PD +TY+ +L  LCK G L+EA +
Sbjct: 383 TPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFR 442

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +  S   P +  YN LI G+   G +E A  L+  +   GI P  +T+  +I G  
Sbjct: 443 LLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLL 502

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +     EA ++ +++   G    +  Y + I G  ++     A++++E M+   +  D +
Sbjct: 503 KEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMVGRGFSADSS 562

Query: 539 VFSTIVKKVADD 550
            F  ++   ++D
Sbjct: 563 TFQMLLDLESND 574



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 220/446 (49%), Gaps = 2/446 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR--IEKASKVLQIM 178
           NK+L +   +   +    L   M   N  P+ +    LI  L   +R  +  A   L  M
Sbjct: 73  NKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKM 132

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P  +T+  ++ GLC + +I  A+ L DE+   G  P +ITY TI++ +   G  
Sbjct: 133 FKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHT 192

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+   K    KGC P ++ Y  +I+ +CK      A+    +M  +G  P++VTY+S+
Sbjct: 193 TNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSI 252

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  G+ ++A  +   ++ R + PN++T+  L+  L   G      ++ ++M E   
Sbjct: 253 LHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGV 312

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  +TY+ L++G C    +D A   F+ MV K   P +  YN ++   CK   LNEA  
Sbjct: 313 EPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKT 372

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +     +P  +TY+TL+ G  + G  + A  L+ +M   G+ PD IT+  L+ G C
Sbjct: 373 LLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLC 432

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +   ++EA  LLK + +   +     Y ++I G+C   K++ A ++   +     +P   
Sbjct: 433 KHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVV 492

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++ ++  +  +G++ EA ++++K++
Sbjct: 493 TYTVMISGLLKEGLSNEACEMFRKMV 518



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 205/407 (50%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+ GL    +I  A K+   +   G  P  ITY  ++ GLCK G   +A+ LL +M   G
Sbjct: 147 LLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKG 206

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+PDV+ YNT++ ++  + +  +A+ F+ + + +G PP ++TY+ ++   C    +  A 
Sbjct: 207 CKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEAT 266

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +   M      P+ VT+  LV+  CK+G   +A  V   +   G+EP++ TY+ L+   
Sbjct: 267 SLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGY 326

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             +   D   K+ DIM     +P+V  YNILING CK   ++ A    ++M  ++  PD 
Sbjct: 327 CLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDT 386

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTY+T++   C+ G    A +L   +      P  ITY+ L+DGL K G +++A  L   
Sbjct: 387 VTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGLCKHGHLDEAFRLLKA 446

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M E+ I P    +  LI G C   ++E A +L   +  +G +     Y ++I GL K   
Sbjct: 447 MQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSVVTYTVMISGLLKEGL 506

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            + A ++   M+ +   P+   ++  ++    +G    A +L ++++
Sbjct: 507 SNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEEMV 553



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 97/387 (25%), Positives = 195/387 (50%), Gaps = 2/387 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           +P  + +N ++G L K+    + I+L  +M +S   P+V T   ++  +  + +      
Sbjct: 66  LPPVVVFNKLLGSLVKKKHYSTVISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFA 125

Query: 244 F--WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           F       + G  P  +T+  L+  +C +  I  A+++ D++   G +P ++TY +++  
Sbjct: 126 FSALGKMFKLGLQPTHVTFGTLLNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKG 185

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK G   +A+ ++  +  +G +P+ + YNT++ SL      +        M +    P 
Sbjct: 186 LCKIGHTTNALQLLKKMEEKGCKPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPN 245

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TY+ +++G C  G ++ A + F QM+ +N  P+ VT+  ++  LCKEGM+ EA ++  
Sbjct: 246 VVTYSSILHGFCNLGQLNEATSLFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFE 305

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           ++  +   P   TY+ L+DG   +  M++A  L+  M+  G +P    +  LI G C++ 
Sbjct: 306 MMTENGVEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSR 365

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ EA  LL E+  R        Y  ++ G C++ +  +A ++ + M S    PD   +S
Sbjct: 366 RLNEAKTLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYS 425

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKV 568
            ++  +   G  +EA++L + + E K+
Sbjct: 426 ILLDGLCKHGHLDEAFRLLKAMQESKI 452



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 113/396 (28%), Positives = 190/396 (47%), Gaps = 10/396 (2%)

Query: 185 PDTITYNMMVGGLCKR----GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           P +IT     GG C        +  A+A  +++      P V+ +N +L ++     +  
Sbjct: 32  PSSITN----GGFCSNYNNLHSVADAVASFNQLLGIRPLPPVVVFNKLLGSLVKKKHYST 87

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCK--QCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            I   K        P + T TILI  +C   +  +  A   L  M   G  P  VT+ +L
Sbjct: 88  VISLCKQMDLSNIRPNVYTLTILINCLCHSNRDHVHFAFSALGKMFKLGLQPTHVTFGTL 147

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C + K  DAV + + +   G  P+ ITY T++  L   G      ++L  M E   
Sbjct: 148 LNGLCSKAKIIDAVKLFDEIGKMGFAPSLITYTTIIKGLCKIGHTTNALQLLKKMEEKGC 207

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V  YN +I+ LCK    + A+  F++MV +   P++VTY+++L   C  G LNEA  
Sbjct: 208 KPDVVAYNTVIDSLCKDRRANEAMYFFSEMVDQGIPPNVVTYSSILHGFCNLGQLNEATS 267

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   + G +  P  +T+  L+DGL K+G + +A  ++  M ENG+ PD  T+  L+ G+C
Sbjct: 268 LFKQMIGRNVMPNTVTFTILVDGLCKEGMILEARRVFEMMTENGVEPDAYTYSALMDGYC 327

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              Q++EA  L   +  +G       Y ++I+G CKS++++ A  +L  M      PD  
Sbjct: 328 LQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAKTLLSEMYDRDLTPDTV 387

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            +ST+++     G  + A KL++++  + +     T
Sbjct: 388 TYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSIT 423



 Score =  115 bits (287), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 123/258 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T + ++  +C + ++ +A KL DIM  +   P       LI G  +  R+ +A 
Sbjct: 312 VEPDAYTYSALMDGYCLQSQMDEAQKLFDIMVGKGFAPSVRVYNILINGHCKSRRLNEAK 371

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  M      PDT+TY+ ++ G C+ G+ + A  L  EM   G  PD ITY+ +L  +
Sbjct: 372 TLLSEMYDRDLTPDTVTYSTLMQGFCQAGRPQVAQKLFKEMCSYGLLPDSITYSILLDGL 431

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G   +A    K        P++  Y ILI+ +C    +  A E+  ++ ++G  P +
Sbjct: 432 CKHGHLDEAFRLLKAMQESKIEPHICIYNILIQGMCNFGKLEAARELFSNLFVKGIQPSV 491

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  +++   K+G  ++A  +   ++  G  PNS TYN  +      G      ++++ 
Sbjct: 492 VTYTVMISGLLKEGLSNEACEMFRKMVVNGCLPNSCTYNVAIQGFLRNGDPSNAVRLIEE 551

Query: 353 MNEASHSPTVFTYNILIN 370
           M     S    T+ +L++
Sbjct: 552 MVGRGFSADSSTFQMLLD 569


>gi|15229026|ref|NP_190450.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75183419|sp|Q9M302.1|PP270_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At3g48810
 gi|7576219|emb|CAB87909.1| putative protein [Arabidopsis thaliana]
 gi|332644937|gb|AEE78458.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 659

 Score =  216 bits (549), Expect = 3e-53,   Method: Compositional matrix adjust.
 Identities = 139/460 (30%), Positives = 225/460 (48%), Gaps = 34/460 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD--------------------------F 152
           T N +L+  C   K+  A KL+  M+ +   PD                          F
Sbjct: 183 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERF 242

Query: 153 HFCIN----LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
              ++    LI GL +    + A ++++ MV  G  P+ I+Y+ ++  LC  GQI  A +
Sbjct: 243 EPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFS 302

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK-GCPPYLITYTILIEQV 267
            L +M   GC P++ T +++++  F  G    A+  W   +R  G  P ++ Y  L++  
Sbjct: 303 FLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGF 362

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C    I +A+ V   M   GCSP+I TY SL+N   K+G  D AV + N +L+ G  PN 
Sbjct: 363 CSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNV 422

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           + Y  ++ +L     +   + +++IM++ + +P+V T+N  I GLC  G +D A   F Q
Sbjct: 423 VVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQ 482

Query: 388 MVSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           M  ++ C P+IVTYN +L  L K   + EA  L   +          TYNTL+ G    G
Sbjct: 483 MEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAG 542

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI--GKRGNKMRNSA 504
               A+ L G+MM +G SPD+IT   +I  +C+  + E A  +L  +  G+R  +    +
Sbjct: 543 LPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVIS 602

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           Y  VI GLC+S   +  + +LE MIS+   P    +S ++
Sbjct: 603 YTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLI 642



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 129/459 (28%), Positives = 223/459 (48%), Gaps = 35/459 (7%)

Query: 136 ASKLIDIMARRNQI---PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           A + +++  R  +    P      +++  L+  +RI+    V + M   G  P+  TYN+
Sbjct: 127 AERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 186

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG---------------- 236
           ++  LCK  ++  A  LL EMS  GC PD ++Y T++ +M + G                
Sbjct: 187 LLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVV 246

Query: 237 --------------KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
                          +K A    ++ + KG  P +I+Y+ LI  +C    I  A   L  
Sbjct: 247 SVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQ 306

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRG 341
           M   GC P+I T +SLV     +G   DA+ + N ++   G++PN + YNTL+    S G
Sbjct: 307 MLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHG 366

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
                  +   M E   SP + TY  LING  K G +D A+  +N+M++  C P++V Y 
Sbjct: 367 NIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYT 426

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-ME 460
            ++ ALC+     EA  L+ +++  +C+P + T+N  I GL   G ++ A  ++ QM  +
Sbjct: 427 NMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 486

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           +   P+ +T+  L+ G  +A+++EEA  L +EI  RG +  +S Y  ++HG C +    +
Sbjct: 487 HRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGI 546

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           A+Q++  M+     PD+   + I+      G  E A ++
Sbjct: 547 ALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQM 585



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 110/445 (24%), Positives = 212/445 (47%), Gaps = 36/445 (8%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +IR L    +++    +LQ M + G       +  ++    + G    A+ +   +   G
Sbjct: 82  MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 141

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+P V  YN +L T+    + +     ++D  R G  P + TY +L++ +CK   +  A 
Sbjct: 142 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 201

Query: 278 EVLDDMAIEGCSPDIVT------------------------------YNSLVNFSCKQGK 307
           ++L +M+ +GC PD V+                              YN+L+N  CK+  
Sbjct: 202 KLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAERFEPVVSVYNALINGLCKEHD 261

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           Y  A  ++  ++ +G+ PN I+Y+TL++ L + G  +     L  M +    P ++T + 
Sbjct: 262 YKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSS 321

Query: 368 LINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           L+ G    G    A++ +NQM+     QP++V YNT++   C  G + +A+ +   +   
Sbjct: 322 LVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEI 381

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            CSP + TY +LI+G AK+G ++ A+ ++ +M+ +G  P+ + +  ++   CR  + +EA
Sbjct: 382 GCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMVEALCRHSKFKEA 441

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS-RYKPDDTVFSTIVK 545
             L++ + K         +   I GLC + ++D A +V   M    R  P+   ++ ++ 
Sbjct: 442 ESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQHRCPPNIVTYNELLD 501

Query: 546 KVADDGMTEEAYKLWQKL----IEW 566
            +A     EEAY L +++    +EW
Sbjct: 502 GLAKANRIEEAYGLTREIFMRGVEW 526



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/368 (28%), Positives = 169/368 (45%), Gaps = 18/368 (4%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-P 185
            C+ G++  A   +  M +R   P+ +   +L++G         A  +   M+   G+ P
Sbjct: 291 LCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQP 350

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + + YN +V G C  G I  A+++   M   GC P++ TY +++      G    A+  W
Sbjct: 351 NVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIW 410

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
              L  GC P ++ YT ++E +C+      A  +++ M+ E C+P + T+N+ +   C  
Sbjct: 411 NKMLTSGCCPNVVVYTNMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDA 470

Query: 306 GKYDDAVLVINNLLSRGM-EPNSITYNTLLHSLGSRG----CWDAVDKILDIMNEASHSP 360
           G+ D A  V   +  +    PN +TYN LL  L         +    +I     E S S 
Sbjct: 471 GRLDWAEKVFRQMEQQHRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSS- 529

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN L++G C  GL   A+    +M+     PD +T N ++ A CK+G    A Q+L
Sbjct: 530 ---TYNTLLHGSCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQML 586

Query: 421 HLLNGSSCS-----PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            L+   SC      P +I+Y  +I GL +  C E  ++L  +M+  GI P   T   LI 
Sbjct: 587 DLV---SCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643

Query: 476 GFCRADQV 483
            F   D V
Sbjct: 644 CFILDDIV 651



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 179/375 (47%), Gaps = 10/375 (2%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDNGKFKQAIGFW 245
           +T+ +M+  L   GQ+ S   LL +M + G  C  D+  + +++      G  ++A+  +
Sbjct: 77  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL--FISVISVYRQVGLAERAVEMF 134

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
                 GC P +  Y  +++ +  +  I     V  DM  +G  P++ TYN L+   CK 
Sbjct: 135 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 194

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
            K D A  ++  + ++G  P++++Y T++ S+   G      ++ +        P V  Y
Sbjct: 195 NKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGRELAE-----RFEPVVSVY 249

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N LINGLCK      A     +MV K   P++++Y+T++  LC  G +  A   L  +  
Sbjct: 250 NALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLINVLCNSGQIELAFSFLTQMLK 309

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGFCRADQVE 484
             C P + T ++L+ G   +G    A+ L+ QM+   G+ P+ + + TL+ GFC    + 
Sbjct: 310 RGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIV 369

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +AV +   + + G       Y  +I+G  K   +D A+ +   M++S   P+  V++ +V
Sbjct: 370 KAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVYIWNKMLTSGCCPNVVVYTNMV 429

Query: 545 KKVADDGMTEEAYKL 559
           + +      +EA  L
Sbjct: 430 EALCRHSKFKEAESL 444



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 160/366 (43%), Gaps = 52/366 (14%)

Query: 241 AIGFWKD----QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVT 294
           A+ F+K      L K  P   +T+ ++I ++     +     +L  M ++G  CS D+  
Sbjct: 59  ALHFFKSIANSNLFKHTP---LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL-- 113

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           + S+++   + G  + AV +   +   G +P+   YN +L +L        +  +   M 
Sbjct: 114 FISVISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMK 173

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P VFTYN+L+  LCK   VD A     +M +K C PD V+Y TV+ ++C+ G++ 
Sbjct: 174 RDGFEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVK 233

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           E  +L          P +  YN LI+GL K+   + A  L  +M+E GISP+ I++ TLI
Sbjct: 234 EGREL-----AERFEPVVSVYNALINGLCKEHDYKGAFELMREMVEKGISPNVISYSTLI 288

Query: 475 WGFCRADQVEEAVDLLKEIGKRG----------------------------NKMRNS--- 503
              C + Q+E A   L ++ KRG                            N+M      
Sbjct: 289 NVLCNSGQIELAFSFLTQMLKRGCHPNIYTLSSLVKGCFLRGTTFDALDLWNQMIRGFGL 348

Query: 504 -----AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                AY  ++ G C    +  A+ V   M      P+   + +++   A  G  + A  
Sbjct: 349 QPNVVAYNTLVQGFCSHGNIVKAVSVFSHMEEIGCSPNIRTYGSLINGFAKRGSLDGAVY 408

Query: 559 LWQKLI 564
           +W K++
Sbjct: 409 IWNKML 414



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 3/216 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C   K  +A  LI+IM++ N  P        I+GL    R++ A KV + M    
Sbjct: 428 MVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQH 487

Query: 183 GVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
             P + +TYN ++ GL K  +I  A  L  E+ + G E    TYNT+L    + G    A
Sbjct: 488 RCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSSSTYNTLLHGSCNAGLPGIA 547

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI--EGCSPDIVTYNSLV 299
           +      +  G  P  IT  ++I   CKQ    RA ++LD ++       PD+++Y +++
Sbjct: 548 LQLVGKMMVDGKSPDEITMNMIILAYCKQGKAERAAQMLDLVSCGRRKWRPDVISYTNVI 607

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
              C+    +D V+++  ++S G+ P+  T++ L++
Sbjct: 608 WGLCRSNCREDGVILLERMISAGIVPSIATWSVLIN 643



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 61/283 (21%), Positives = 124/283 (43%), Gaps = 16/283 (5%)

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD- 344
           EGCS  +     L+ F           L +N+LL+       I    ++  L    C   
Sbjct: 5   EGCSLLLKVQKPLIPFVLNTN------LNVNHLLTESPNHAEIKELDVVKRLRQESCVPL 58

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK--NCQPDIVTYNT 402
           A+     I N      T  T+ ++I  L   G VD       QM  +  +C  D+  + +
Sbjct: 59  ALHFFKSIANSNLFKHTPLTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL--FIS 116

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           V+    + G+   A+++ + +    C P +  YN ++D L  +  ++   ++Y  M  +G
Sbjct: 117 VISVYRQVGLAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDG 176

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             P+  T+  L+   C+ ++V+ A  LL E+  +G      +Y  VI  +C+   V    
Sbjct: 177 FEPNVFTYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPDAVSYTTVISSMCEVGLVKEGR 236

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++ E     R++P  +V++ ++  +  +   + A++L ++++E
Sbjct: 237 ELAE-----RFEPVVSVYNALINGLCKEHDYKGAFELMREMVE 274



 Score = 47.0 bits (110), Expect = 0.031,   Method: Compositional matrix adjust.
 Identities = 53/188 (28%), Positives = 83/188 (44%), Gaps = 31/188 (16%)

Query: 20  LQWCS---RQVSLQHGVVNNHRTQFYSQLRDLGAGRNVSLKCRGLPGNVCIDRVNEVDQD 76
           L W     RQ+  QH    N  T  Y++L D  A  N   +  GL   + +  V      
Sbjct: 473 LDWAEKVFRQMEQQHRCPPNIVT--YNELLDGLAKANRIEEAYGLTREIFMRGV------ 524

Query: 77  EWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFV--------ENDEKTNNKILQNFC 128
           EWSS ++    N  L G      S +  LP      V          DE T N I+  +C
Sbjct: 525 EWSSSTY----NTLLHG------SCNAGLPGIALQLVGKMMVDGKSPDEITMNMIILAYC 574

Query: 129 SRGKLTDASKLIDIMA--RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            +GK   A++++D+++  RR   PD     N+I GL R +  E    +L+ M+ +G VP 
Sbjct: 575 KQGKAERAAQMLDLVSCGRRKWRPDVISYTNVIWGLCRSNCREDGVILLERMISAGIVPS 634

Query: 187 TITYNMMV 194
             T+++++
Sbjct: 635 IATWSVLI 642


>gi|242092708|ref|XP_002436844.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
 gi|241915067|gb|EER88211.1| hypothetical protein SORBIDRAFT_10g009870 [Sorghum bicolor]
          Length = 755

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 234/444 (52%), Gaps = 2/444 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  F   G++  A  L   M  +   P+      +I GL +   +++A  V Q M+ 
Sbjct: 165 NTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQVVDRAKGVFQQMID 224

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD  TYN ++ G    G+ +  + +L+EMS  G EPD ITY  +L  +  NG+ ++
Sbjct: 225 RGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYALLLDYLCKNGRCRE 284

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A  F+    RKG  P +  Y IL+     +  ++     LD M   G SP+   +N +  
Sbjct: 285 ARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNGVSPNRRIFNIMFC 344

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHS 359
              K+   ++A+ + N +  +G+ P+ +++  L+ +L   G   DAV +   ++NE   +
Sbjct: 345 AYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRVDDAVLQFNQMINEGV-T 403

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P +F ++ L+ GLC  G  ++A   F +++ +    D V +NT++  LC EG + EA +L
Sbjct: 404 PNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTLMCNLCNEGRVMEAQRL 463

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           + L+      P +I+YNTL+ G    G +++A  L   M+ NG+ P++ T+  L+ G+C+
Sbjct: 464 IDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTILLRGYCK 523

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A +V++A  L +E+  +G     + Y  ++HGL ++ +   A ++   MI+SR K D   
Sbjct: 524 ARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYT 583

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           ++ I+  +  +   +EA+K++++L
Sbjct: 584 YNIILNGLCKNNFVDEAFKMFRRL 607



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 216/456 (47%), Gaps = 8/456 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T   +L   C  G+  +A    D M R+   PD      L+ G      + +  
Sbjct: 262 LEPDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMH 321

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             L +MV +G  P+   +N+M     K+  I  A+ + ++M   G  PDV+++  ++  +
Sbjct: 322 SFLDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDAL 381

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A+  +   + +G  P +  ++ L+  +C      +A E+  ++  +G   D 
Sbjct: 382 CKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDA 441

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V +N+L+   C +G+  +A  +I+ ++  G+ PN I+YNTL+      G  D   K+LD+
Sbjct: 442 VFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDV 501

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P  FTY IL+ G CK   VD A + F +M+ K   P + TYNT+L  L + G 
Sbjct: 502 MVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGR 561

Query: 413 LNEALQL-LHLLNGSSCSPC-LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
            +EA +L L+++N  S + C + TYN +++GL K   +++A  ++ ++       D +T 
Sbjct: 562 FSEANELYLNMIN--SRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTF 619

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             +I    +  + E+A+DL   I   G       YRL+   L +   +     +   M  
Sbjct: 620 NIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEK 679

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEA----YKLWQK 562
           S   P+  + + +V+++   G    A    YKL +K
Sbjct: 680 SGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEK 715



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 108/401 (26%), Positives = 190/401 (47%), Gaps = 4/401 (0%)

Query: 113 VENDEKTNNKILQ-NFCSRGK---LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           V N    N +I    FC+  K   + +A  + + M ++   PD      LI  L ++ R+
Sbjct: 328 VGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCKLGRV 387

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A      M+  G  P+   ++ +V GLC  G+   A  L  E+   G   D + +NT+
Sbjct: 388 DDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVFFNTL 447

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  + + G+  +A       +R G  P +I+Y  L+   C    I  A ++LD M   G 
Sbjct: 448 MCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAAKLLDVMVSNGL 507

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P+  TY  L+   CK  + DDA  +   +L +G+ P   TYNT+LH L   G +   ++
Sbjct: 508 KPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGLFQTGRFSEANE 567

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M  +     ++TYNI++NGLCK   VD A   F ++ SK+ Q D VT+N ++GAL 
Sbjct: 568 LYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDSVTFNIMIGALL 627

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G   +A+ L   ++     P ++TY  + + L ++G + +   L+  M ++G +P+  
Sbjct: 628 KGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSAMEKSGTAPNSH 687

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
               L+        +  A   L ++ ++   +  S   ++I
Sbjct: 688 MLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLI 728



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 176/389 (45%), Gaps = 36/389 (9%)

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
           S   P+  TY+ ++      G+ +     +   L+ G    +I  + L++ +C    +  
Sbjct: 84  SKVAPNACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDE 143

Query: 276 AIEVLD-DMAIEGCSPDIVTYNSLVNFSCKQGK--------------------------- 307
           A ++L   M+  GC PD+V YN+++N   ++G+                           
Sbjct: 144 ATDILLLRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVI 203

Query: 308 --------YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
                    D A  V   ++ RG++P++ TYN L+H   S G W  V ++L+ M+     
Sbjct: 204 DGLCKAQVVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLE 263

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   TY +L++ LCK G    A   F+ M  K  +PD+  Y  +L     +G L+E    
Sbjct: 264 PDCITYALLLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSF 323

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L L+ G+  SP    +N +    AKK  +E+AM ++ +M + G+SPD ++   LI   C+
Sbjct: 324 LDLMVGNGVSPNRRIFNIMFCAYAKKAMIEEAMHIFNKMRQQGLSPDVVSFGALIDALCK 383

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             +V++AV    ++   G       +  +++GLC   K + A ++   ++      D   
Sbjct: 384 LGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQGICVDAVF 443

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           F+T++  + ++G   EA +L   +I   V
Sbjct: 444 FNTLMCNLCNEGRVMEAQRLIDLMIRVGV 472



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 168/367 (45%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G++ DA    + M      P+     +L+ GL  + + EKA ++   ++  G
Sbjct: 377 LIDALCKLGRVDDAVLQFNQMINEGVTPNIFVFSSLVYGLCTVGKWEKAEELFFEVLDQG 436

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              D + +N ++  LC  G++  A  L+D M   G  P+VI+YNT++      G+  +A 
Sbjct: 437 ICVDAVFFNTLMCNLCNEGRVMEAQRLIDLMIRVGVRPNVISYNTLVAGHCLTGRIDEAA 496

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 +  G  P   TYTIL+   CK   +  A  +  +M ++G +P + TYN++++  
Sbjct: 497 KLLDVMVSNGLKPNEFTYTILLRGYCKARRVDDAYSLFREMLMKGVTPVVATYNTILHGL 556

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            + G++ +A  +  N+++   + +  TYN +L+ L      D   K+   +         
Sbjct: 557 FQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVDEAFKMFRRLCSKDPQLDS 616

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+NI+I  L K G  + A++ F  + +    PD+VTY  +   L +EG L E   L   
Sbjct: 617 VTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIAENLIEEGSLGEFDGLFSA 676

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  S  +P     N L+  L  +G + +A V   ++ E   S +  T   LI  + R + 
Sbjct: 677 MEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFSLEASTTSMLISLYSRGEY 736

Query: 483 VEEAVDL 489
              A  L
Sbjct: 737 QPHAKSL 743



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 87/331 (26%), Positives = 154/331 (46%), Gaps = 7/331 (2%)

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQ-CGIA--RAIEVLDDMAIEGCS---PDIV 293
           +A+  + + L    P  +  +  L+  V +  C  A  R + +   MA E  S   P+  
Sbjct: 32  EALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNAC 91

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDI 352
           TY+ L+   C+ G+ +        +L  G   N I  + LL  L  ++   +A D +L  
Sbjct: 92  TYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLLR 151

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+E    P V  YN +ING  + G V++A N F +M+ +   P++VTY TV+  LCK  +
Sbjct: 152 MSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQV 211

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ A  +   +      P   TYN LI G    G  ++ + +  +M  +G+ PD IT+  
Sbjct: 212 VDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYAL 271

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+   C+  +  EA      + ++G K   + Y +++HG      +      L+LM+ + 
Sbjct: 272 LLDYLCKNGRCREARLFFDSMFRKGIKPDVAIYAILLHGYATKGALSEMHSFLDLMVGNG 331

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             P+  +F+ +    A   M EEA  ++ K+
Sbjct: 332 VSPNRRIFNIMFCAYAKKAMIEEAMHIFNKM 362



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/271 (26%), Positives = 139/271 (51%), Gaps = 12/271 (4%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH------SPTV 362
           D+A+ + + LL      +   +N LL  +   GC  A ++++ +    +       +P  
Sbjct: 31  DEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPNA 90

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ILI   C+ G ++    +F  ++    + +++  + +L  LC    ++EA  +L L
Sbjct: 91  CTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILLL 150

Query: 423 -LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++   C P ++ YNT+I+G  ++G +EKA  L+ +MM+ GI P+ +T+ T+I G C+A 
Sbjct: 151 RMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGIPPNVVTYTTVIDGLCKAQ 210

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            V+ A  + +++  RG K  N  Y  +IHG   + K    +Q+LE M +   +PD   ++
Sbjct: 211 VVDRAKGVFQQMIDRGVKPDNGTYNCLIHGYLSTGKWKEVVQMLEEMSTHGLEPDCITYA 270

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
            ++  +  +G   EA     +L    +F KG
Sbjct: 271 LLLDYLCKNGRCREA-----RLFFDSMFRKG 296



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/251 (26%), Positives = 117/251 (46%), Gaps = 2/251 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N ++   C  G++ +A+KL+D+M      P +F + I L+RG  +  R++ A  + + M+
Sbjct: 480 NTLVAGHCLTGRIDEAAKLLDVMVSNGLKPNEFTYTI-LLRGYCKARRVDDAYSLFREML 538

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           M G  P   TYN ++ GL + G+   A  L   M  S  + D+ TYN IL  +  N    
Sbjct: 539 MKGVTPVVATYNTILHGLFQTGRFSEANELYLNMINSRTKCDIYTYNIILNGLCKNNFVD 598

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A   ++    K      +T+ I+I  + K      A+++   ++  G  PD+VTY  + 
Sbjct: 599 EAFKMFRRLCSKDPQLDSVTFNIMIGALLKGGRKEDAMDLFATISAYGLVPDVVTYRLIA 658

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
               ++G   +   + + +   G  PNS   N L+  L  RG        L  ++E + S
Sbjct: 659 ENLIEEGSLGEFDGLFSAMEKSGTAPNSHMLNALVRRLLHRGDISRAGVYLYKLDEKNFS 718

Query: 360 PTVFTYNILIN 370
               T ++LI+
Sbjct: 719 LEASTTSMLIS 729



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 7/163 (4%)

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM---EKAMVLYGQMME---NGISPD 466
           L+EAL+L   L   +    +  +N L+  +++ GC    E+ + L+ +M     + ++P+
Sbjct: 30  LDEALKLFDELLHCARPASVRAFNQLLTVVSRAGCSSASERVVSLFTRMARECSSKVAPN 89

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             T+  LI  FCR  ++E        I K G ++       ++ GLC +K+VD A  +L 
Sbjct: 90  ACTYSILIGCFCRMGRLEHGFAAFGLILKTGWRVNVIVISQLLKGLCDAKRVDEATDILL 149

Query: 527 LMISSRYKPDDTV-FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           L +S    P D V ++T++     +G  E+AY L+ ++++  +
Sbjct: 150 LRMSEFGCPPDVVAYNTVINGFFREGQVEKAYNLFLEMMDQGI 192


>gi|302757529|ref|XP_002962188.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
 gi|300170847|gb|EFJ37448.1| hypothetical protein SELMODRAFT_60915 [Selaginella moellendorffii]
          Length = 535

 Score =  216 bits (549), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 123/493 (24%), Positives = 239/493 (48%), Gaps = 47/493 (9%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L      G+L+DA            +  F+    L+RG    D  E  + +L+ M  
Sbjct: 1   NSLLLALVRGGQLSDALGFFQSSISEPNVSSFNI---LLRGFAARDDFEVVNALLREMKA 57

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE-------PDVITYNTILRTMF 233
            G   +  T+ +++  LC R  +  A++  +  +   C        PD +TY  I+  +F
Sbjct: 58  RGITSNGATHGVILSALCARRDLDKAVSYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLF 117

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G +   + +++  +   C P L+TYT+L++ +CK   + RA +V ++M  +G  PDI+
Sbjct: 118 KAGNYDAGLEYYEKMVASKCEPTLLTYTVLVDGLCKAHKVERACDVFEEMIRKGHKPDII 177

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG------------ 341
            Y+SL++   K G+ D+A  +++ +++RG  P ++ Y +++  L   G            
Sbjct: 178 AYSSLIDGLSKAGRVDEARKLVDLMIARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEM 237

Query: 342 --------------------CWDAVDKILDIMNEASH---SPTVFTYNILINGLCKYGLV 378
                                   V++   +M E +    +P   +Y + I  L   G  
Sbjct: 238 RRRRLRPRVDTYSFIVTGYIGMGKVEEAFAVMEEMADRDCAPDTISYTMFIEALYSIGRR 297

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + A   F  MV K C+PD+ TY  ++   CKEG +  A  +L L++ ++  P    Y  +
Sbjct: 298 EEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMI 357

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +DG  K   +E+A+ LY +++++GI P  +T+ T+I   C+  +++EA++LL+E+ +R  
Sbjct: 358 MDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKE 417

Query: 499 KMRNS--AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           ++  S   Y ++IHGL K    + A  +L  MI +   PD   ++++++ +A  G    A
Sbjct: 418 ELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRA 477

Query: 557 YKLWQKLIEWKVF 569
            +L +++++  +F
Sbjct: 478 MELLEEMLKAGIF 490



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/513 (25%), Positives = 236/513 (46%), Gaps = 49/513 (9%)

Query: 80  SESHVLAVNKKLRGLTITKKSH--DPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDAS 137
           SE +V + N  LRG          +  L       + ++  T+  IL   C+R  L  A 
Sbjct: 25  SEPNVSSFNILLRGFAARDDFEVVNALLREMKARGITSNGATHGVILSALCARRDLDKAV 84

Query: 138 KLIDIMARRN-------QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
              +             + PD      ++ GL +    +   +  + MV S   P  +TY
Sbjct: 85  SYFNSRTEEACRLFEAIEAPDSVTYTAIVDGLFKAGNYDAGLEYYEKMVASKCEPTLLTY 144

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
            ++V GLCK  ++  A  + +EM   G +PD+I Y++++  +   G+  +A       + 
Sbjct: 145 TVLVDGLCKAHKVERACDVFEEMIRKGHKPDIIAYSSLIDGLSKAGRVDEARKLVDLMIA 204

Query: 251 KGCPPYLITYTILIEQVCKQCG------------------------------------IA 274
           +G PP  + YT ++  +CK CG                                    + 
Sbjct: 205 RGPPPTAVAYTSIVAGLCK-CGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVE 263

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A  V+++MA   C+PD ++Y   +      G+ ++A  V   ++ +G +P+  TY  ++
Sbjct: 264 EAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIII 323

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            +    G   A   +L +M++A+  P  + Y ++++G  K   ++ A+  + +++     
Sbjct: 324 DNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGIL 383

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLN--GSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           P  VTYNTV+ ALCK   ++EAL+LL  +        P ++TY+ +I GL K G  E+A 
Sbjct: 384 PSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAF 443

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  +M++NG+ PD  T+ +LI     A +V  A++LL+E+ K G    +  Y  ++  L
Sbjct: 444 DLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIFPDDHTYGTLVQIL 503

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           C+S  VD A  +L+ M+ + + P++  F  + K
Sbjct: 504 CRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEK 535


>gi|145326646|ref|NP_001077770.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332196072|gb|AEE34193.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  215 bits (548), Expect = 4e-53,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 227/458 (49%), Gaps = 19/458 (4%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++ FC   KL+ +      + +    PD      L+ GL   DRI +A  +   MV 
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204

Query: 181 SGGV---------------PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           +G +               P  IT+N ++ GLC  G++  A AL+++M   G   DV+TY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
            TI+  M   G  K A+            P ++ Y+ +I+++CK    + A  +  +M  
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +G +P++ TYN +++  C  G++ DA  ++ +++ R + P+ +T+N L+ +    G    
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
            +K+ D M      P   TYN +I G CK+   D A + F+ M S    PD+VT+NT++ 
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIID 440

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             C+   ++E +QLL  ++         TYNTLI G  +   +  A  L+ +M+ +G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D IT   L++GFC  +++EEA++L + I      +   AY ++IHG+CK  KVD A  + 
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             +     +PD   ++ ++          +A  L+ K+
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 219/456 (48%), Gaps = 38/456 (8%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           +A  L D M      P       LI GL    R+ +A+ ++  MV  G   D +TY  +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            G+CK G  +SA+ LL +M  +  +PDV+ Y+ I+  +  +G    A   + + L KG  
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P + TY  +I+  C     + A  +L DM     +PD++T+N+L++ S K+GK  +A  +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF----------- 363
            + +L R + P+++TYN++++       +D    + D+M  AS     F           
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM--ASPDVVTFNTIIDVYCRAK 446

Query: 364 ----------------------TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
                                 TYN LI+G C+   ++ A + F +M+S    PD +T N
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            +L   C+   L EAL+L  ++  S      + YN +I G+ K   +++A  L+  +  +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G+ PD  T+  +I GFC    + +A  L  ++   G++  NS Y  +I G  K+ ++D +
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 522 IQVLELMISSRYKPDDTVF---STIVKKVADDGMTE 554
           I+++  M S+ +  D         I+ +V+D+ + E
Sbjct: 627 IELISEMRSNGFSGDAFTIKMAEEIICRVSDEEIIE 662



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 180/392 (45%), Gaps = 6/392 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+   C  G    A  L+  M   +  PD      +I  L +      A  + 
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+  TYN M+ G C  G+   A  LL +M      PDV+T+N ++      
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A     + L +   P  +TY  +I   CK      A  + D MA    SPD+VT+
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTF 435

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++  C+  + D+ + ++  +  RG+  N+ TYNTL+H        +A   +   M  
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   T NIL+ G C+   ++ A+  F  +       D V YN ++  +CK   ++E
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   L      P + TYN +I G   K  +  A VL+ +M +NG  PD+ T+ TLI 
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           G  +A +++++++L+ E+  R N     A+ +
Sbjct: 616 GCLKAGEIDKSIELISEM--RSNGFSGDAFTI 645



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 217/460 (47%), Gaps = 51/460 (11%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L DA    D M R         C  +I   +R++R + A  + + M +     +  ++N+
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++   C   ++  +++   +++  G +PDV+T+NT+L  +    +  +A+  +       
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFG------ 200

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
              Y++           + G   A+ + D M   G +P ++T+N+L+N  C +G+  +A 
Sbjct: 201 ---YMV-----------ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            ++N ++ +G+  + +TY T+++ +   G   +   +L  M E    P V  Y+ +I+ L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G    A   F++M+ K   P++ TYN ++   C  G  ++A +LL  +     +P +
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF--------------- 477
           +T+N LI    K+G + +A  L  +M+   I PD +T+ ++I+GF               
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426

Query: 478 ----------------CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
                           CRA +V+E + LL+EI +RG     + Y  +IHG C+   ++ A
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             + + MIS    PD    + ++    ++   EEA +L++
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 20/299 (6%)

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           AI +   M I     +I ++N L+   C   K   ++     L   G +P+ +T+NTLLH
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L    C +  D+I       S +  +F Y      + + G ++ A+  F+QMV     P
Sbjct: 185 GL----CLE--DRI-------SEALALFGY------MVETGFLE-AVALFDQMVEIGLTP 224

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
            ++T+NT++  LC EG + EA  L++ + G      ++TY T+++G+ K G  + A+ L 
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M E  I PD + +  +I   C+     +A  L  E+ ++G       Y  +I G C  
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            +   A ++L  MI     PD   F+ ++     +G   EA KL  +++   +F    T
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403


>gi|356551942|ref|XP_003544331.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 545

 Score =  215 bits (548), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 236/452 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N I+  FC  G++  A   +  + +    P+      L++GL    ++++A 
Sbjct: 89  VEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEAL 148

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +    ++  G     I+Y +++ G+CK G+ R+AI LL  +      P+V+ Y+ I+  +
Sbjct: 149 RFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRL 208

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +    +A   + + + KG  P ++TY+IL+   C    + RAI++L++M +E  +PDI
Sbjct: 209 CKDTLVDEAYDLYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDI 268

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY  LV+  CK+GK  +A  V+  ++   +  + + Y+TL+         +   ++   
Sbjct: 269 YTYTILVDALCKEGKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYT 328

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +   +P V  Y+I+INGLCK   VD A+N F ++  KN  PD VTY +++  LCK G 
Sbjct: 329 MTQMGVTPDVHCYSIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGR 388

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++    L   +      P +ITYN LID L K G +++A+ L+ +M +  I P+  T   
Sbjct: 389 ISYVWDLFDEMLDRGQPPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTI 448

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  +++ A++  +++  +G  +    Y ++I+GLCK   +D A+ +   M  + 
Sbjct: 449 LLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCKEGLLDEALALQSRMEDNG 508

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              D   F  +++   D    ++A KL +++I
Sbjct: 509 CISDAVTFEIMIRAFFDKDENDKAEKLVREMI 540



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 195/380 (51%), Gaps = 10/380 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G+   A +L+  + R +  P+      +I  L +   +++A  +   MV  G
Sbjct: 169 LINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLYTEMVGKG 228

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TY+++V G C  GQ+  AI LL+EM +    PD+ TY  ++  +   GK K+A 
Sbjct: 229 ISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAE 288

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 ++      ++ Y+ L++  C    +  A  V   M   G +PD+  Y+ ++N  
Sbjct: 289 NVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGL 348

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG----CWDAVDKILDIMNEASH 358
           CK  + D+A+ +   +  + M P+++TY +L+  L   G     WD  D++LD       
Sbjct: 349 CKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLD----RGQ 404

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TYN LI+ LCK G +DRAI  FN+M  +  +P++ T+  +L  LCK G L  AL+
Sbjct: 405 PPDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPNVYTFTILLDGLCKVGRLKNALE 464

Query: 419 LLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
               LL    C   + TY  +I+GL K+G +++A+ L  +M +NG   D +T   +I  F
Sbjct: 465 FFQDLLTKGYCLN-VRTYTVMINGLCKEGLLDEALALQSRMEDNGCISDAVTFEIMIRAF 523

Query: 478 CRADQVEEAVDLLKEIGKRG 497
              D+ ++A  L++E+  RG
Sbjct: 524 FDKDENDKAEKLVREMIARG 543



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 192/383 (50%), Gaps = 8/383 (2%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P T  +N ++  L    +  +AI+L  +M +S  EPD  T N I+      G+   A   
Sbjct: 56  PHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSG 115

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
               L+ G  P  IT   L++ +C +  +  A+   D +  +G     ++Y  L+N  CK
Sbjct: 116 VSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCK 175

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDKILDIMNE---ASHSP 360
            G+   A+ ++  +    + PN + Y+ ++     R C D  VD+  D+  E      SP
Sbjct: 176 IGETRAAIRLLRRIERWSIRPNVVIYSMII----DRLCKDTLVDEAYDLYTEMVGKGISP 231

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY+IL++G C  G ++RAI+  N+MV +N  PDI TY  ++ ALCKEG + EA  +L
Sbjct: 232 DVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVKEAENVL 291

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            ++  +  +  ++ Y+TL+DG      +  A  ++  M + G++PD   +  +I G C+ 
Sbjct: 292 AVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMINGLCKI 351

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +V+EA++L +EI ++        Y  +I  LCKS ++     + + M+     PD   +
Sbjct: 352 KRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQPPDVITY 411

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++  +  +G  + A  L+ K+
Sbjct: 412 NNLIDALCKNGHLDRAIALFNKM 434



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 92/360 (25%), Positives = 180/360 (50%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A++  + M      P    +N IL ++ +  ++  AI  +K        P   T  I+I 
Sbjct: 42  AVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIIN 101

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             C    +  A   +  +   G  P+ +T N+L+   C +GK  +A+   + +L++G   
Sbjct: 102 CFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRL 161

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           + I+Y  L++ +   G   A  ++L  +   S  P V  Y+++I+ LCK  LVD A + +
Sbjct: 162 SGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYDLY 221

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            +MV K   PD+VTY+ ++   C  G LN A+ LL+ +   + +P + TY  L+D L K+
Sbjct: 222 TEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKE 281

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G +++A  +   M++  ++ D + + TL+ G+C  ++V  A  +   + + G       Y
Sbjct: 282 GKVKEAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCY 341

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++I+GLCK K+VD A+ + E +      PD   +++++  +   G     + L+ ++++
Sbjct: 342 SIMINGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLD 401



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 92/354 (25%), Positives = 169/354 (47%), Gaps = 35/354 (9%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T + ++  FC  G+L  A  L++ M   N  PD +    L+  L +  +++
Sbjct: 226 GKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALCKEGKVK 285

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A  VL +MV +    D + Y+ ++ G C   ++ +A  +   M+  G  PDV  Y+ ++
Sbjct: 286 EAENVLAVMVKACVNLDVVVYSTLMDGYCLVNEVNNAKRVFYTMTQMGVTPDVHCYSIMI 345

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +    +  +A+  +++  +K   P  +TYT LI+ +CK   I+   ++ D+M   G  
Sbjct: 346 NGLCKIKRVDEALNLFEEIHQKNMVPDTVTYTSLIDCLCKSGRISYVWDLFDEMLDRGQP 405

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD++TYN+L++  CK G  D A+ + N +  + + PN                       
Sbjct: 406 PDVITYNNLIDALCKNGHLDRAIALFNKMKDQAIRPN----------------------- 442

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
                       V+T+ IL++GLCK G +  A+  F  +++K    ++ TY  ++  LCK
Sbjct: 443 ------------VYTFTILLDGLCKVGRLKNALEFFQDLLTKGYCLNVRTYTVMINGLCK 490

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           EG+L+EAL L   +  + C    +T+  +I     K   +KA  L  +M+  G+
Sbjct: 491 EGLLDEALALQSRMEDNGCISDAVTFEIMIRAFFDKDENDKAEKLVREMIARGL 544



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 78/271 (28%), Positives = 126/271 (46%), Gaps = 35/271 (12%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           DDAV   N++      P++  +N +L SL +   +     +   M  +   P  FT NI+
Sbjct: 40  DDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNII 99

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH------- 421
           IN  C +G V  A +  ++++    QP+ +T NT++  LC EG + EAL+          
Sbjct: 100 INCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGF 159

Query: 422 ---------LLNGS-------------------SCSPCLITYNTLIDGLAKKGCMEKAMV 453
                    L+NG                    S  P ++ Y+ +ID L K   +++A  
Sbjct: 160 RLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPNVVIYSMIIDRLCKDTLVDEAYD 219

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           LY +M+  GISPD +T+  L+ GFC   Q+  A+DLL E+           Y +++  LC
Sbjct: 220 LYTEMVGKGISPDVVTYSILVSGFCIVGQLNRAIDLLNEMVLENINPDIYTYTILVDALC 279

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           K  KV  A  VL +M+ +    D  V+ST++
Sbjct: 280 KEGKVKEAENVLAVMVKACVNLDVVVYSTLM 310



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/208 (24%), Positives = 99/208 (47%), Gaps = 11/208 (5%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           SHS    T+N            D A++ FN M   +  P    +N +L +L        A
Sbjct: 29  SHSLPPLTHN-----------ADDAVSQFNHMFHVHPTPHTFHFNKILISLVNVKRYPTA 77

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           + L   +  S   P   T N +I+     G +  A     ++++ G  P+ IT  TL+ G
Sbjct: 78  ISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFSGVSKILKLGYQPNTITLNTLMKG 137

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C   +V+EA+    ++  +G ++   +Y ++I+G+CK  +   AI++L  +     +P+
Sbjct: 138 LCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVCKIGETRAAIRLLRRIERWSIRPN 197

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             ++S I+ ++  D + +EAY L+ +++
Sbjct: 198 VVIYSMIIDRLCKDTLVDEAYDLYTEMV 225



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 32/140 (22%), Positives = 61/140 (43%)

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P    +N ++  L        A+ LY QM  + + PD  T   +I  FC   QV  A  
Sbjct: 55  TPHTFHFNKILISLVNVKRYPTAISLYKQMELSEVEPDYFTLNIIINCFCHFGQVVLAFS 114

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
            + +I K G +        ++ GLC   KV  A++  + +++  ++     +  ++  V 
Sbjct: 115 GVSKILKLGYQPNTITLNTLMKGLCLEGKVKEALRFHDKVLAQGFRLSGISYGILINGVC 174

Query: 549 DDGMTEEAYKLWQKLIEWKV 568
             G T  A +L +++  W +
Sbjct: 175 KIGETRAAIRLLRRIERWSI 194


>gi|302815701|ref|XP_002989531.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
 gi|300142709|gb|EFJ09407.1| hypothetical protein SELMODRAFT_130008 [Selaginella moellendorffii]
          Length = 436

 Score =  215 bits (547), Expect = 5e-53,   Method: Compositional matrix adjust.
 Identities = 120/367 (32%), Positives = 195/367 (53%), Gaps = 1/367 (0%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  G   +A KL+  M  +           +I  L +++R+E+A ++++ M      PD
Sbjct: 55  LCKVGNFDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMARYAP-PD 113

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            +TY  +V  LCK  +I  A+A ++EM+  G +PD   YN +L  +    K ++A   ++
Sbjct: 114 ALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFE 173

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             +++   P ++TY  LI  +CK   I  A E+  +MA +G  P  V+YN+L++  CK+ 
Sbjct: 174 KMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKK 233

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
               A  V + ++     PN +TY TL+  L   G   A  ++LD M +   +P V TY+
Sbjct: 234 DLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYS 293

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI+G CK   VD A     QMV++   P +VTYN +L +LC+   L +A +L   +   
Sbjct: 294 CLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQR 353

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            C P ++TYNTL+  L     ++ A  LY +M+  G  PD IT+ TL WG  RA +V EA
Sbjct: 354 RCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEA 413

Query: 487 VDLLKEI 493
            +L++++
Sbjct: 414 QELMEKM 420



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/421 (28%), Positives = 215/421 (51%), Gaps = 1/421 (0%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           MA R  IP       +  G  +  R+E+  +V Q MV +G       Y +++  LCK G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
              A  LL  M +   +   I Y+TI+  +    + ++A     +++ +  PP  +TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELI-EKMARYAPPDALTYGP 119

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           ++E++CK   I  A+  +++MA  G  PD   YN +++  C++ K ++A L+   ++ + 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + PN +TYNTL++ L      +   ++   M    + PT  +YN LI+G CK   +  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           + F++MV  NC P++VTY T++  L K G +  A ++L  +     +P + TY+ LIDG 
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K   +++A  L  QM+  GI+P  +T+  L+   CRAD++E+A  L + + +R      
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  ++  LC  K++D A ++   MI+    PD   + T+   +   G   EA +L +K
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVHEAQELMEK 419

Query: 563 L 563
           +
Sbjct: 420 M 420



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/387 (27%), Positives = 194/387 (50%), Gaps = 1/387 (0%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M +   +P   T+N +  G  K G++     +   M  +G       Y  ++  +   G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A         K      I Y+ +I  +CK   +  A E+++ MA     PD +TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGP 119

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +V   CK  + DDA+  +  + +RG++P++  YN +L  L      +    + + M +  
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +P V TYN LINGLCK   ++ A   F +M  K   P  V+YNT++   CK+  L  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +   +  S+C P ++TY TLIDGL+K G ++ A  +   M++ G++P+  T+  LI GF
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  +V+EA  LL+++  +G       Y ++++ LC++ K++ A ++   M   R  P  
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRRCHPTV 359

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
             ++T+++ +      + A++L+ ++I
Sbjct: 360 VTYNTLLRALCHHKQLDGAHRLYAEMI 386



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 169/319 (52%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           +   D  T   I++  C   ++ DA   ++ MA R   PD      ++ GL + +++E+A
Sbjct: 109 YAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEA 168

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             + + MV     P+ +TYN ++ GLCK  +I +A  L  EM+  G  P  ++YNT++  
Sbjct: 169 RLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDG 228

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
                    A   +   +R  C P ++TYT LI+ + K   +  A EVLD M  +G +P+
Sbjct: 229 FCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPN 288

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           + TY+ L++  CK  + D+A  ++  ++++G+ P  +TYN LL+SL      +   K+  
Sbjct: 289 VATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFR 348

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M +    PTV TYN L+  LC +  +D A   + +M++K C PD +TY+T+   L + G
Sbjct: 349 GMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAG 408

Query: 412 MLNEALQLLHLLNGSSCSP 430
            ++EA +L+  +  +  +P
Sbjct: 409 KVHEAQELMEKMKLTKRNP 427



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 93/355 (26%), Positives = 179/355 (50%), Gaps = 1/355 (0%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           M++    P   T+NT+       G+ +Q    ++  +  G       Y ILI  +CK   
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
              A ++L  M ++      + Y++++N+ CK  + ++A  +I  + +R   P+++TY  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKM-ARYAPPDALTYGP 119

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           ++  L      D     ++ M      P  F YN +++GLC+   V+ A   F +MV + 
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             P++VTYNT++  LCK   +  A +L   + G    P  ++YNTLIDG  KK  +  A 
Sbjct: 180 INPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCKKKDLVAAK 239

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            ++ +M+ +   P+ +T+ TLI G  ++ +V+ A ++L  + K+G     + Y  +I G 
Sbjct: 240 DVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVATYSCLIDGF 299

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           CK ++VD A ++LE M++    P    ++ ++  +      E+A+KL++ + + +
Sbjct: 300 CKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMAQRR 354



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 45/181 (24%), Positives = 87/181 (48%), Gaps = 1/181 (0%)

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M  +   P   T+NTV     K G L +  ++   +  +  +     Y  LI  L K G 
Sbjct: 1   MALRRVIPGAATFNTVADGFAKAGRLEQVKEVYQGMVEAGYTLRASGYGILISCLCKVGN 60

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            ++A  L   M         I + T+I   C+ ++VEEA +L++++  R        Y  
Sbjct: 61  FDEAYKLLHTMRLKRFKRKAIAYSTIINWLCKLNRVEEARELIEKMA-RYAPPDALTYGP 119

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           ++  LCK+K++D A+  +E M +   KPD  +++ ++  +  +   EEA  L++K+++ +
Sbjct: 120 IVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMVKQR 179

Query: 568 V 568
           +
Sbjct: 180 I 180


>gi|297796945|ref|XP_002866357.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297312192|gb|EFH42616.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 907

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 117/428 (27%), Positives = 227/428 (53%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A +L D M      PD +    +IR L  +  + +A +++  M  +G   + + YN+++ 
Sbjct: 211 AMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLID 270

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
           GLCK+ ++  A+ +  +++    +PDV+TY T++  +    +F+  +    + LR    P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSP 330

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
                + L+E + K+  +  A+ ++  +A  G SP+I  YN+L++  CK   +D+A L+ 
Sbjct: 331 SEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLF 390

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           + +   G+ PN +TY+ L+     RG  D     L  M +    P+V+ YN LING CK+
Sbjct: 391 DRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKF 450

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G +  A +   +M++K  +P +VTY +++G  C +G +N+AL+L H + G    P + T+
Sbjct: 451 GDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTF 510

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
            TL+ GL + G +  A+ L+ +M E  + P+ +T+  +I G+C    + +A + L E+ +
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIE 570

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           +G      +YR +IHGLC + +   A   ++ +     + ++  ++ ++     +G  EE
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630

Query: 556 AYKLWQKL 563
           A  + Q +
Sbjct: 631 ALSVCQDM 638



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/429 (29%), Positives = 214/429 (49%), Gaps = 6/429 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +CS+GK+  A +L   M  +  +P  +    L+ GL R   I  A K+   M
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEM 533

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+ +TYN+M+ G C+ G +  A   L+EM   G  PD  +Y  ++  +   G+ 
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCLTGQA 593

Query: 239 KQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            +A  F  D L KG C    I YT L+   C++  +  A+ V  DM + G   D+V Y  
Sbjct: 594 SEAKVFV-DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVCYGV 652

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++ S K       + ++  +  RG++P+ + Y +++ +    G +     I D+M    
Sbjct: 653 LIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE-GMLNEA 416
             P   TY  +INGLCK G V+ A    ++M   N  P+ VTY   L  L K  G + +A
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILTKGVGDMKKA 772

Query: 417 LQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           ++L + +L G   +    TYN LI G  ++G ME+A  L  +M+ +G+SPD IT+ T+I 
Sbjct: 773 VELHNAILKGLLANTA--TYNMLIRGFCRQGRMEEASELITRMIGDGVSPDCITYTTMIS 830

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             CR + V++A++L   + ++G +    AY  +IHG C + ++  A ++   M+    KP
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLKP 890

Query: 536 DDTVFSTIV 544
           +     T +
Sbjct: 891 NTETSETTI 899



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 221/482 (45%), Gaps = 37/482 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC RGKL  A   +  M      P  +   +LI G  +   I  A  ++  M
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEM 463

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +     P  +TY  ++GG C +G+I  A+ L  EM+  G  P + T+ T+L  +F  G  
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLI 523

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A+  + +       P  +TY ++IE  C++  +++A E L++M  +G  PD  +Y  L
Sbjct: 524 RDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPL 583

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS----------------LGSRG- 341
           ++  C  G+  +A + ++ L     E N I Y  LLH                 +G RG 
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGV 643

Query: 342 -----CWDAV--------DK-----ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
                C+  +        D+     +L  M++    P    Y  +I+   K G    A  
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            ++ M+++ C P+ VTY  V+  LCK G +NEA  L   +   +  P  +TY   +D L 
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKMRPGNSVPNQVTYGCFLDILT 763

Query: 444 KK-GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
           K  G M+KA+ L+  +++ G+  +  T+  LI GFCR  ++EEA +L+  +   G     
Sbjct: 764 KGVGDMKKAVELHNAILK-GLLANTATYNMLIRGFCRQGRMEEASELITRMIGDGVSPDC 822

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +I  LC+   V  AI++   M     +PD   ++T++      G   +A +L  +
Sbjct: 823 ITYTTMISELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882

Query: 563 LI 564
           ++
Sbjct: 883 ML 884



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 119/454 (26%), Positives = 209/454 (46%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  ++ D  T   ++   C   +     ++ID M R    P      +L+ GL +  ++E
Sbjct: 290 GKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVE 349

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A  +++ +   G  P+   YN ++  LCK      A  L D M   G  P+ +TY+ ++
Sbjct: 350 EALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILI 409

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                 GK   A+ F  + +  G  P +  Y  LI   CK   I+ A  ++ +M  +   
Sbjct: 410 DMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLE 469

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P +VTY SL+   C +GK + A+ + + +  +G+ P+  T+ TLL  L   G      K+
Sbjct: 470 PTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKL 529

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M E +  P   TYN++I G C+ G + +A    N+M+ K   PD  +Y  ++  LC 
Sbjct: 530 FTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIEKGIVPDTYSYRPLIHGLCL 589

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G  +EA   +  L+  +C    I Y  L+ G  ++G +E+A+ +   M   G+  D + 
Sbjct: 590 TGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQDMGLRGVDLDLVC 649

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  LI G  +    +  + LLKE+  RG K  +  Y  +I    K+     A  + +LMI
Sbjct: 650 YGVLIDGSLKHKDRKVFLGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMI 709

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +    P++  ++ ++  +   G   EA  L  K+
Sbjct: 710 NEGCVPNEVTYTAVINGLCKAGFVNEAEILCSKM 743



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 103/409 (25%), Positives = 201/409 (49%), Gaps = 1/409 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           LI+  +R  R+     V ++M+    + P+  T + ++ GL K      A+ L D+M   
Sbjct: 162 LIQHYVRSRRVLDGVLVFKMMMTKVSLLPEVRTLSALLHGLVKFRHFGLAMELFDDMINV 221

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  PDV  Y  ++R++ +     +A          GC   ++ Y +LI+ +CK+  +  A
Sbjct: 222 GIRPDVYIYTGVIRSLCELKDLSRAKEMIVQMEATGCDVNIVPYNVLIDGLCKKQKVWEA 281

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + +  D+A +   PD+VTY +LV   CK  +++  + +I+ +L     P+    ++L+  
Sbjct: 282 VGIKKDLAGKELKPDVVTYCTLVCGLCKVQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEG 341

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L  RG  +    ++  + E   SP +F YN LI+ LCK    D A   F++M      P+
Sbjct: 342 LRKRGKVEEALNLVKRVAEFGVSPNIFVYNALIDSLCKGRNFDEAELLFDRMGKIGLCPN 401

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            VTY+ ++   C+ G L+ AL  L  +      P +  YN+LI+G  K G +  A  L  
Sbjct: 402 DVTYSILIDMFCRRGKLDTALSFLGEMIDMGLKPSVYPYNSLINGHCKFGDISAAESLMA 461

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M+   + P  +T+ +L+ G+C   ++ +A+ L  E+  +G       +  ++ GL ++ 
Sbjct: 462 EMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIVPSIYTFTTLLSGLFRAG 521

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +  A+++   M     KP+   ++ +++   ++G   +A++   ++IE
Sbjct: 522 LIRDAVKLFTEMAEWNVKPNRVTYNVMIEGYCEEGNMSKAFEFLNEMIE 570



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 93/349 (26%), Positives = 174/349 (49%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P+V T + +L  +     F  A+  + D +  G  P +  YT +I  +C+   ++RA E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFDDMINVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           +  M   GC  +IV YN L++  CK+ K  +AV +  +L  + ++P+ +TY TL+  L  
Sbjct: 250 IVQMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKELKPDVVTYCTLVCGLCK 309

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
              ++   +++D M     SP+    + L+ GL K G V+ A+N   ++      P+I  
Sbjct: 310 VQEFEVGLEMIDEMLRLRFSPSEAAVSSLVEGLRKRGKVEEALNLVKRVAEFGVSPNIFV 369

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           YN ++ +LCK    +EA  L   +      P  +TY+ LID   ++G ++ A+   G+M+
Sbjct: 370 YNALIDSLCKGRNFDEAELLFDRMGKIGLCPNDVTYSILIDMFCRRGKLDTALSFLGEMI 429

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           + G+ P    + +LI G C+   +  A  L+ E+  +  +     Y  ++ G C   K++
Sbjct: 430 DMGLKPSVYPYNSLINGHCKFGDISAAESLMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            A+++   M      P    F+T++  +   G+  +A KL+ ++ EW V
Sbjct: 490 KALRLYHEMTGKGIVPSIYTFTTLLSGLFRAGLIRDAVKLFTEMAEWNV 538


>gi|297830278|ref|XP_002883021.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328861|gb|EFH59280.1| hypothetical protein ARALYDRAFT_479138 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 504

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 136/475 (28%), Positives = 229/475 (48%), Gaps = 6/475 (1%)

Query: 94  LTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP--- 150
           L I+     P+L      F         KIL+N     +  +A  L   M     +P   
Sbjct: 24  LQISNHGASPTLSLCGFCFWIRAFSNYRKILRNGLHNLQFNEALDLFTRMVHSRPLPSIV 83

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           DF   +++I  + R D +    + +QI+ +S   P   T N+++  +C+  Q   A   L
Sbjct: 84  DFTRLLSVIAKMKRFDVVISLFEQMQILGIS---PVLYTCNIVMNCVCRSSQPCRASCFL 140

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
            +M   G EPD++T+ ++L       + + A+  +   +  G  P ++TYT LI  +CK 
Sbjct: 141 GKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKN 200

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             +  A+E+ + M   G  P++VTYNSLV+  C+ G++ DA  ++ +++ RG++PN IT+
Sbjct: 201 RHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITF 260

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
             L+ +    G      ++  +M + S  P VFTY  LINGLC YG +D A   F  M S
Sbjct: 261 TALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMES 320

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
               P+ VTY T++   CK   + +  ++ + ++        ITY  LI G    G  + 
Sbjct: 321 NGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDV 380

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A  ++ QM      PD  T+  L+ G C    VE+A+ + K + KR   +    Y ++I 
Sbjct: 381 AQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQ 440

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           G+CK  KV+ A  +   + S   KP+   ++T++      G   EA  L++K+ E
Sbjct: 441 GMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKE 495



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 117/379 (30%), Positives = 188/379 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   +   AS  +  M +    PD     +L+ G    +RIE A  +   +
Sbjct: 119 TCNIVMNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQI 178

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+ +TY  ++  LCK   +  A+ + ++M  +G  P+V+TYN+++  + + G++
Sbjct: 179 VGMGFRPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRW 238

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    +D +++G  P +IT+T LI+   K   I  A E+   M      PD+ TY +L
Sbjct: 239 SDAAWLLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTAL 298

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C  G+ D+A  +   + S G  PN +TY TL+H        +   KI   M++   
Sbjct: 299 INGLCTYGRLDEARQMFYLMESNGYYPNEVTYTTLIHGFCKSKRVEDGTKIFYEMSQKGL 358

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TY +LI G C  G  D A   FNQM S+   PDI TYN +L  LC  G + +AL 
Sbjct: 359 VANTITYTVLIQGYCLVGRPDVAQEVFNQMGSRRAPPDIRTYNVLLDGLCYNGYVEKALM 418

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +        ++TY  +I G+ K G +E A  L+  +   G+ P+ IT+ T+I GFC
Sbjct: 419 IFKYMRKREMDINIVTYTIIIQGMCKVGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 478

Query: 479 RADQVEEAVDLLKEIGKRG 497
           R   + EA  L K++ + G
Sbjct: 479 RRGFIHEADALFKKMKEDG 497



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/354 (29%), Positives = 173/354 (48%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   +L  FC   ++ DA  L D +      P+      LI  L +   +  A +
Sbjct: 149 EPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGFRPNVVTYTTLIHCLCKNRHLNHAVE 208

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M  +G  P+ +TYN +V GLC+ G+   A  LL +M   G +P+VIT+  ++    
Sbjct: 209 IFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAWLLRDMMKRGIQPNVITFTALIDAFV 268

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK  +A   +K  ++    P + TYT LI  +C    +  A ++   M   G  P+ V
Sbjct: 269 KVGKIMEAKELYKVMIQMSVYPDVFTYTALINGLCTYGRLDEARQMFYLMESNGYYPNEV 328

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +L++  CK  + +D   +   +  +G+  N+ITY  L+      G  D   ++ + M
Sbjct: 329 TYTTLIHGFCKSKRVEDGTKIFYEMSQKGLVANTITYTVLIQGYCLVGRPDVAQEVFNQM 388

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P + TYN+L++GLC  G V++A+  F  M  +    +IVTY  ++  +CK G +
Sbjct: 389 GSRRAPPDIRTYNVLLDGLCYNGYVEKALMIFKYMRKREMDINIVTYTIIIQGMCKVGKV 448

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +A  L   L      P +ITY T+I G  ++G + +A  L+ +M E+G  P++
Sbjct: 449 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGFIHEADALFKKMKEDGFLPNE 502



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/234 (23%), Positives = 107/234 (45%), Gaps = 3/234 (1%)

Query: 347 DKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           ++ LD+     HS   P++  +  L++ + K    D  I+ F QM      P + T N V
Sbjct: 64  NEALDLFTRMVHSRPLPSIVDFTRLLSVIAKMKRFDVVISLFEQMQILGISPVLYTCNIV 123

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +  +C+      A   L  +      P L+T+ +L+ G      +E A+ L+ Q++  G 
Sbjct: 124 MNCVCRSSQPCRASCFLGKMMKLGFEPDLVTFTSLLHGFCHWNRIEDALALFDQIVGMGF 183

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P+ +T+ TLI   C+   +  AV++  ++G  G +     Y  ++ GLC+  +   A  
Sbjct: 184 RPNVVTYTTLIHCLCKNRHLNHAVEIFNQMGDNGIRPNVVTYNSLVSGLCEIGRWSDAAW 243

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           +L  M+    +P+   F+ ++      G   EA +L++ +I+  V+    T  A
Sbjct: 244 LLRDMMKRGIQPNVITFTALIDAFVKVGKIMEAKELYKVMIQMSVYPDVFTYTA 297


>gi|357494039|ref|XP_003617308.1| Auxin response factor [Medicago truncatula]
 gi|355518643|gb|AET00267.1| Auxin response factor [Medicago truncatula]
          Length = 948

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 128/409 (31%), Positives = 206/409 (50%), Gaps = 32/409 (7%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D +T N ++   C  G++ +A+KL D M  R+   D      L+ GL R+ ++++A  
Sbjct: 267 EPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEARA 326

Query: 174 VL--------------------------------QIMVMSGGVPDTITYNMMVGGLCKRG 201
           +L                                + MV++G  PD  T+N+M+ GLCK+G
Sbjct: 327 MLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGLCKKG 386

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
            + SA+  LDEM   G EP+VITY  ++      G F++A         KG     + Y 
Sbjct: 387 YLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNTVGYN 446

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            LI  +CK   I  A+++  +M+ +GC PDI T+NSL+   CK  K ++A+ +  ++L  
Sbjct: 447 CLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRDMLLE 506

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G+  N++TYNTL+H+          DK++  M          TYN LI  LCK G  ++ 
Sbjct: 507 GVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNITYNGLIKALCKTGATEKC 566

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +    QM  +   P I + N ++ + C+ G +N+ALQ L  +     +P ++TYN+LI+G
Sbjct: 567 LGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDMIQRGLTPDIVTYNSLING 626

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
           L K G  ++A+ L+  +   GI PD +T+ TLI  +C      +A  LL
Sbjct: 627 LCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLFNDACQLL 675



 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/424 (28%), Positives = 216/424 (50%), Gaps = 5/424 (1%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M  R   P  +    +++    ++ ++ A  +L+ M   G VP++I Y M++  L +  +
Sbjct: 191 MLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNR 250

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +  A+ LL+EM + GCEPDV T+N ++  +   G+  +A       L +      +    
Sbjct: 251 VNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGY 310

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-LVINNLLSR 321
           L+  +C+   +  A  +L  +     +P+ V YN+L+N     G++++A  L+  N++  
Sbjct: 311 LMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIA 366

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G EP++ T+N ++  L  +G   +  + LD M +    P V TY ILI+G CK G  + A
Sbjct: 367 GFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEA 426

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
               N M +K    + V YN ++GALCK+G + +ALQ+   ++   C P + T+N+LI G
Sbjct: 427 SKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYG 486

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L K   ME+A+ LY  M+  G+  + +T+ TLI  F R + +++A  L+ E+  RG  + 
Sbjct: 487 LCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLD 546

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           N  Y  +I  LCK+   +  + ++E M      P     + ++      G   +A +  +
Sbjct: 547 NITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLR 606

Query: 562 KLIE 565
            +I+
Sbjct: 607 DMIQ 610



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 122/441 (27%), Positives = 231/441 (52%), Gaps = 5/441 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++       ++ +A KL++ M      PD     ++I GL +  RI +A+K+   M++  
Sbjct: 241 LIHALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRD 300

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              D +    ++ GLC+ G++  A A+L ++      P+ + YNT++     +G+F++A 
Sbjct: 301 FTADALIQGYLMHGLCRMGKVDEARAMLSKIP----NPNTVLYNTLINGYVVSGRFEEAK 356

Query: 243 GF-WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +K+ +  G  P   T+ I+I+ +CK+  +  A+E LD+M  +G  P+++TY  L++ 
Sbjct: 357 DLLYKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDG 416

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CKQG +++A  V+N++ ++G+  N++ YN L+ +L   G      ++   M+     P 
Sbjct: 417 FCKQGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPD 476

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           ++T+N LI GLCK   ++ A+  +  M+ +    + VTYNT++ A  +  ++ +A +L+ 
Sbjct: 477 IYTFNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVG 536

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +    C    ITYN LI  L K G  EK + L  QM    I P   +   LI  FCR  
Sbjct: 537 EMRFRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTG 596

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V +A+  L+++ +RG       Y  +I+GLCK  +   A+ +   + +    PD   ++
Sbjct: 597 KVNDALQFLRDMIQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYN 656

Query: 542 TIVKKVADDGMTEEAYKLWQK 562
           T++ +   +G+  +A +L  K
Sbjct: 657 TLISRYCYEGLFNDACQLLFK 677



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 207/400 (51%), Gaps = 5/400 (1%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  V   M+  G  P   T+ +++   C   ++ SA +LL +M+  GC P+ I Y  ++ 
Sbjct: 184 APNVFYDMLSRGISPTVYTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIH 243

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            + +N +  +A+   ++    GC P + T+  +I  +CK   I  A ++ D M +   + 
Sbjct: 244 ALSENNRVNEAMKLLEEMFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTA 303

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKI 349
           D +    L++  C+ GK D+A      +LS+   PN++ YNTL++     G ++ A D +
Sbjct: 304 DALIQGYLMHGLCRMGKVDEA----RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLL 359

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M  A   P  FT+NI+I+GLCK G +  A+   ++MV K  +P+++TY  ++   CK
Sbjct: 360 YKNMVIAGFEPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCK 419

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +G   EA ++++ ++    S   + YN LI  L K G ++ A+ +YG+M   G  PD  T
Sbjct: 420 QGHFEEASKVVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYT 479

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             +LI+G C+ D++EEA+ L +++   G       Y  +IH   + + +  A +++  M 
Sbjct: 480 FNSLIYGLCKNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMR 539

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
                 D+  ++ ++K +   G TE+   L +++   ++F
Sbjct: 540 FRGCPLDNITYNGLIKALCKTGATEKCLGLIEQMFGEEIF 579



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 110/331 (33%), Positives = 176/331 (53%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++   C +G L  A + +D M ++   P+      LI G  +    E+ASK
Sbjct: 369 EPDAFTFNIMIDGLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASK 428

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V+  M   G   +T+ YN ++G LCK G+I+ A+ +  EMS  GC+PD+ T+N+++  + 
Sbjct: 429 VVNSMSAKGLSLNTVGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLC 488

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            N K ++A+G ++D L +G     +TY  LI    +   I +A +++ +M   GC  D +
Sbjct: 489 KNDKMEEALGLYRDMLLEGVIANTVTYNTLIHAFLRLELIQQADKLVGEMRFRGCPLDNI 548

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN L+   CK G  +  + +I  +    + P+  + N L++S    G  +   + L  M
Sbjct: 549 TYNGLIKALCKTGATEKCLGLIEQMFGEEIFPSINSCNILINSFCRTGKVNDALQFLRDM 608

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +   +P + TYN LINGLCK G    A+N FN + +K   PD VTYNT++   C EG+ 
Sbjct: 609 IQRGLTPDIVTYNSLINGLCKMGRFQEALNLFNGLQAKGIHPDAVTYNTLISRYCYEGLF 668

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           N+A QLL     +   P  IT++ LI+   K
Sbjct: 669 NDACQLLFKGVSNGFIPNEITWSILINYFVK 699



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 197/422 (46%), Gaps = 6/422 (1%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
           +R  I  FH    LI  L  +   +   K+L+ M   G V     + +++    K G   
Sbjct: 87  QRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYGKAGLPG 146

Query: 205 SAIALLDEMSVSGC-EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
            A  LL +M    C EP   +YN +L  +      K A   + D L +G  P + T+ ++
Sbjct: 147 QATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTVYTFGVV 206

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           ++  C    +  A  +L DM   GC P+ + Y  L++   +  + ++A+ ++  +   G 
Sbjct: 207 MKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEEMFLMGC 266

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           EP+  T+N ++H L   G      K+ D M     +        L++GLC+ G VD A  
Sbjct: 267 EPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGKVDEA-- 324

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL-LNGSSCSPCLITYNTLIDGL 442
               M+SK   P+ V YNT++      G   EA  LL+  +  +   P   T+N +IDGL
Sbjct: 325 --RAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMIDGL 382

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            KKG +  A+    +M++ G  P+ IT+  LI GFC+    EEA  ++  +  +G  +  
Sbjct: 383 CKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKVVNSMSAKGLSLNT 442

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +I  LCK  K+  A+Q+   M S   KPD   F++++  +  +   EEA  L++ 
Sbjct: 443 VGYNCLIGALCKDGKIQDALQMYGEMSSKGCKPDIYTFNSLIYGLCKNDKMEEALGLYRD 502

Query: 563 LI 564
           ++
Sbjct: 503 ML 504



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/349 (23%), Positives = 148/349 (42%), Gaps = 33/349 (9%)

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
           F K  L++G       Y +LI+++          ++L  M  EGC      +  ++ +  
Sbjct: 81  FEKAGLQRGYIHSFHVYYLLIDKLGNVGEFKMIDKLLKQMKDEGCVFKESLFILIMRYYG 140

Query: 304 KQGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           K G    A  L+++       EP   +YN +L  L +  C      +   M     SPTV
Sbjct: 141 KAGLPGQATRLLLDMWGVYCFEPTFKSYNVVLEILVAGNCPKVAPNVFYDMLSRGISPTV 200

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +T+ +++   C    VD A +    M    C P+ + Y  ++ AL +   +NEA++LL  
Sbjct: 201 YTFGVVMKAFCMVNEVDSACSLLRDMTKHGCVPNSIIYQMLIHALSENNRVNEAMKLLEE 260

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +    C P + T+N +I GL K G + +A  L+ +M+    + D +    L+ G CR  +
Sbjct: 261 MFLMGCEPDVQTFNDVIHGLCKAGRIHEAAKLHDRMLLRDFTADALIQGYLMHGLCRMGK 320

Query: 483 VEEAVDLLKEIGKRGNKMRNS--------------------------------AYRLVIH 510
           V+EA  +L +I      + N+                                 + ++I 
Sbjct: 321 VDEARAMLSKIPNPNTVLYNTLINGYVVSGRFEEAKDLLYKNMVIAGFEPDAFTFNIMID 380

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           GLCK   +  A++ L+ M+   ++P+   ++ ++      G  EEA K+
Sbjct: 381 GLCKKGYLVSALEFLDEMVKKGFEPNVITYTILIDGFCKQGHFEEASKV 429


>gi|359473390|ref|XP_002268680.2| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
          Length = 748

 Score =  215 bits (547), Expect = 6e-53,   Method: Compositional matrix adjust.
 Identities = 131/443 (29%), Positives = 216/443 (48%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C  G+L    KLI+ M  +   P+ +    +I  L +  ++ +A +VL+ M+  G
Sbjct: 294 VINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEG 353

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD + Y  ++ G CK G + SA  L DEM      PD ITY  ++  +   G+  +A 
Sbjct: 354 IAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEAD 413

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + + + K   P  +TYT LI+  CK+  +  A  + + M   G +P+IVTY +L +  
Sbjct: 414 KLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGL 473

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G+ D A  +++ +  +G+E N  TYN+L++ L   G  D   K++  M  A   P  
Sbjct: 474 CKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDA 533

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY  L++  CK   + RA     QM+ +  QP +VT+N ++   C  GML +  +LL  
Sbjct: 534 VTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKW 593

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   TYN+LI     +  M     +Y  M   G+ PD  T+  LI G C+A  
Sbjct: 594 MLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARN 653

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++EA  L +++  +G  +  S+Y  +I G  K KK   A ++ E M       D  +++ 
Sbjct: 654 MKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNI 713

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
                 D+G  E   +L  + IE
Sbjct: 714 FADINYDEGKMELTLELCDEAIE 736



 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 219/443 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I  + C  G++ +A +L+  M  R  IPD      +I G  ++  +++  K+++ M +
Sbjct: 257 NIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVGELQRVLKLIEEMQI 316

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+  TYN ++  LCK G++  A  +L EM   G  PD + Y T++      G    
Sbjct: 317 KGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSS 376

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + +  ++   P  ITYT +I  +C+   +  A ++  +M  +   PD VTY +L++
Sbjct: 377 AYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALID 436

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK+GK  +A  + N +L  G+ PN +TY  L   L   G  D  +++L  M       
Sbjct: 437 GYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLEL 496

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            ++TYN L+NGLCK G +D+A+     M      PD VTY T++ A CK   +  A +LL
Sbjct: 497 NIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELL 556

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++T+N L++G    G +E    L   M+E GI P+  T+ +LI  +C  
Sbjct: 557 RQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIR 616

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           + +    ++ + +  +G     + Y ++I G CK++ +  A  +   M+   +    + +
Sbjct: 617 NNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSY 676

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++K         EA +L++++
Sbjct: 677 NALIKGFYKRKKFLEARELFEQM 699



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/450 (29%), Positives = 223/450 (49%), Gaps = 11/450 (2%)

Query: 108 SDGPFVE----------NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN 157
           S G FVE          +D +  +   Q     G L +A KL D M     +     C  
Sbjct: 163 SFGHFVEQLIYTYKDWGSDPRVFDIFFQVLVEAGMLDEARKLFDKMLNYGLLISVDSCNL 222

Query: 158 LIRGLIR-IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
            I  L   +D I+ A KV       G   +T +YN++   LC+ G++  A  LL +M + 
Sbjct: 223 FISHLSEDLDGIKIALKVFVEFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELR 282

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           GC PDVI+Y+T++      G+ ++ +   ++   KG  P   TY  +I  +CK   +A A
Sbjct: 283 GCIPDVISYSTVINGYCQVGELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEA 342

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             VL +M  EG +PD V Y +L++  CK G    A  + + +  R + P+ ITY  ++  
Sbjct: 343 ERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICG 402

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G     DK+   M      P   TY  LI+G CK G +  A +  NQM+     P+
Sbjct: 403 LCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPN 462

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           IVTY  +   LCK G ++ A +LLH +        + TYN+L++GL K G +++A+ L  
Sbjct: 463 IVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMK 522

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M   G  PD +T+ TL+  +C++ ++  A +LL+++  R  +     + ++++G C S 
Sbjct: 523 DMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSG 582

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            ++   ++L+ M+     P+ T +++++K+
Sbjct: 583 MLEDGEKLLKWMLEKGIMPNATTYNSLIKQ 612



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 215/423 (50%), Gaps = 6/423 (1%)

Query: 148 QIPDFHFCIN------LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           + P+   C N      +   L ++ R+ +A ++L  M + G +PD I+Y+ ++ G C+ G
Sbjct: 243 EFPEVGVCWNTASYNIITHSLCQLGRVVEAHQLLLQMELRGCIPDVISYSTVINGYCQVG 302

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           +++  + L++EM + G +P+  TYN ++  +   GK  +A    ++ + +G  P  + YT
Sbjct: 303 ELQRVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYT 362

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            LI+  CK   ++ A  + D+M     SPD +TY +++   C+ G+  +A  + + ++ +
Sbjct: 363 TLIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCK 422

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            +EP+ +TY  L+      G       + + M +   +P + TY  L +GLCK G VD A
Sbjct: 423 RLEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTA 482

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
               ++M  K  + +I TYN+++  LCK G +++A++L+  +  +   P  +TY TL+D 
Sbjct: 483 NELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDA 542

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K   M +A  L  QM++  + P  +T   L+ GFC +  +E+   LLK + ++G    
Sbjct: 543 YCKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPN 602

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            + Y  +I   C    +    ++   M +    PD   ++ ++K        +EA+ L +
Sbjct: 603 ATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHR 662

Query: 562 KLI 564
            ++
Sbjct: 663 DMV 665



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 161/360 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T   ++   C  G++ +A KL   M  +   PD      LI G  +  ++++A 
Sbjct: 389 ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAF 448

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M+  G  P+ +TY  +  GLCK G++ +A  LL EM   G E ++ TYN+++  +
Sbjct: 449 SLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGL 508

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   QA+   KD    G  P  +TYT L++  CK   + RA E+L  M      P +
Sbjct: 509 CKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTV 568

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VT+N L+N  C  G  +D   ++  +L +G+ PN+ TYN+L+     R    A  +I   
Sbjct: 569 VTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRG 628

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P   TYNILI G CK   +  A      MV K     + +YN ++    K   
Sbjct: 629 MCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKK 688

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             EA +L   +           YN   D    +G ME  + L  + +E  +  D  T  T
Sbjct: 689 FLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 748


>gi|414586743|tpg|DAA37314.1| TPA: hypothetical protein ZEAMMB73_981845 [Zea mays]
          Length = 524

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 124/396 (31%), Positives = 208/396 (52%), Gaps = 6/396 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L++ C+ GK   A +L+  M R N +        +I G     R++ A +V++ M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPRPNAVT----YNTVIAGFCARGRVQAALEVMREM 173

Query: 179 VMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNG 236
              GG+ PD  TY  ++ G CK G++  A+ + DEM   G   P  + YN ++    D G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDVG 233

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K   A+ + +D +++G    + TY +L+  +      + A  VL++M   G SPD+ TYN
Sbjct: 234 KLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTYN 293

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L+N  CK+G    A+ V   +  +G+   ++TY +L++    +G     D++ ++  + 
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVKK 353

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P V  YN LIN  C  G ++RA     +M  K   PD +TYNT++   C  G L+EA
Sbjct: 354 GIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDEA 413

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             L+  +      P L++YNTLI G + KG ++ A+ +  +MM+ G +P  +T+  LI G
Sbjct: 414 RTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQG 473

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            C+  Q ++A +L+KE+  +G    +S Y  +I GL
Sbjct: 474 LCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGL 509



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 120/402 (29%), Positives = 204/402 (50%), Gaps = 14/402 (3%)

Query: 83  HVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDI 142
           H+ A  K +R L + ++   P            +  T N ++  FC+RG++  A +++  
Sbjct: 125 HLCATGKPVRALELLRQMPRP------------NAVTYNTVIAGFCARGRVQAALEVMRE 172

Query: 143 MARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKR 200
           M  R  I PD +    LI G  +I R+E A KV   M+  G V P  + YN ++GG C  
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCDV 232

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G++  A+   ++M   G    V TYN ++  +F + +   A    ++  + G  P + TY
Sbjct: 233 GKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFTY 292

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            ILI   CK+    +A+EV ++M+ +G     VTY SL+    ++G+  +   + N  + 
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAVK 352

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +G+ P+ + YN L++S  + G  +   +I+  M +    P   TYN L+ G C  G +D 
Sbjct: 353 KGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLDE 412

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A    ++M  +  QPD+V+YNT++     +G + +AL++   +     +P L+TYN LI 
Sbjct: 413 ARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALIQ 472

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           GL K    + A  L  +M+  GI+PDD T+ +LI G    D+
Sbjct: 473 GLCKIRQGDDAENLMKEMVAKGITPDDSTYISLIEGLTTEDE 514



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 201/393 (51%), Gaps = 6/393 (1%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T+N+M+  LC  G+   A+ LL +M      P+ +TYNT++      G+ + A+   +
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMR 171

Query: 247 D-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCK 304
           + + R G  P   TY  LI   CK   +  A++V D+M  +G  +P  V YN+L+   C 
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAVKVFDEMLTKGEVAPSAVMYNALIGGYCD 231

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            GK D A+    +++ RG+     TYN L+H+L           +L+ M +   SP VFT
Sbjct: 232 VGKLDVALQYREDMVQRGIAMTVATYNLLMHALFMDARASDAYAVLEEMQKNGFSPDVFT 291

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YNILING CK G   +A+  F +M  K  +   VTY +++    ++G + E  +L ++  
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSQKGVRATAVTYTSLIYVFSRKGQVQETDRLFNVAV 351

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P ++ YN LI+     G ME+A  +  +M +  I PDD+T+ TL+ GFC   +++
Sbjct: 352 KKGIRPDVVMYNALINSHCTGGDMERAYEIMAEMEKKRIPPDDMTYNTLMRGFCLLGRLD 411

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  L+ E+ KRG +    +Y  +I G      +  A++V + M+   + P    ++ ++
Sbjct: 412 EARTLIDEMTKRGIQPDLVSYNTLISGYSMKGDIKDALRVRDEMMDKGFNPTLMTYNALI 471

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           + +      ++A  L ++++   +    +T ++
Sbjct: 472 QGLCKIRQGDDAENLMKEMVAKGITPDDSTYIS 504


>gi|326506436|dbj|BAJ86536.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 616

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 131/504 (25%), Positives = 236/504 (46%), Gaps = 45/504 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  +  T   I+++ C+RG + DA  ++D M  R        C  ++    R      A 
Sbjct: 104 VPPNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRSAV 163

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           + LQ++   G   D+   N++V  +C++G +   + LL ++   GCEPD+++YN +L+ +
Sbjct: 164 RALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLKGL 223

Query: 233 FDNGKFKQAIGFWKDQLR----------KGCPPYLITYTILIEQVCKQ------------ 270
               ++        + +R           GC P L  Y  +I+ +CK             
Sbjct: 224 CMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDILSR 283

Query: 271 --------------------CGIAR---AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
                               C   R   A ++L +M  E C  D VT+N LV+F C+ G 
Sbjct: 284 MPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQNGL 343

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D  + ++  +L  G  P+ ITY T+++     G  D    +L  M+     P   +Y I
Sbjct: 344 VDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISYTI 403

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           ++ GLC+      A    + M+ + C P+ VT+NT++  +CK+G+  +A++LL  +  + 
Sbjct: 404 VLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLVNG 463

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           CSP LI+Y+T+IDGL K G  E+A+ L   M+  GI+P+ I + ++     R  + ++ +
Sbjct: 464 CSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDKII 523

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            +   I     +   + Y  VI  LCK  + D AI     M+S+   P+++ ++ +++ +
Sbjct: 524 QMFDSIQDATVRSDAALYNAVISSLCKRWETDRAIDFFAYMVSNGCMPNESTYTILIRGL 583

Query: 548 ADDGMTEEAYKLWQKLIEWKVFEK 571
           A +G+  EA  L  +L   +   K
Sbjct: 584 ASEGLVREAQDLLSELCSRRAVRK 607



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/493 (26%), Positives = 238/493 (48%), Gaps = 51/493 (10%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++++ C+ G+  DA++ +D       +  ++    +I G  R  ++  A ++   + +
Sbjct: 48  SALIRSLCAAGRTADAARALDTAGDAAGVVAYN---AMIAGYCRAGQVAAARRLAAAVPV 104

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P+  TY  +V  LC RG I  A+ +LDEM + GC       + IL      G F+ 
Sbjct: 105 P---PNAYTYFPIVRSLCARGLIADALTVLDEMPLRGCAATPPMCHVILEAACRGGGFRS 161

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +    KGC        +++  +C+Q  +   +E+L  +   GC PDIV+YN+++ 
Sbjct: 162 AVRALQVLHAKGCTLDSGNCNLVVSAICEQGCVDEGVELLRKLPSFGCEPDIVSYNAVLK 221

Query: 301 FSCKQGKYDD------------------------------AVL-----------VINNLL 319
             C   ++DD                              A +           V N++L
Sbjct: 222 GLCMAKRWDDVEELMVEMVRVHEALSQMPEHGCTPDLRMYATIIDGICKDGHHEVANDIL 281

Query: 320 SR----GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           SR    G++PN + YNT+L  L S   W+  + +L  M +        T+NIL++  C+ 
Sbjct: 282 SRMPSYGLKPNVVCYNTVLKGLCSAERWEEAEDLLAEMFQEDCPLDDVTFNILVDFFCQN 341

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           GLVDR I    QM+   C PD++TY TV+   CKEG+++EA+ LL  ++   C P  I+Y
Sbjct: 342 GLVDRVIELLEQMLEHGCIPDVITYTTVINGFCKEGLVDEAVMLLKNMSACGCKPNTISY 401

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
             ++ GL +      A  L   M++ G  P+ +T  TLI   C+    E+A++LLK++  
Sbjct: 402 TIVLKGLCRAERWVDAQELISHMIQQGCLPNPVTFNTLINFMCKKGLAEQAIELLKQMLV 461

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G      +Y  VI GL K+ K + A+++L +MI+    P+  ++S++   ++ +G T++
Sbjct: 462 NGCSPDLISYSTVIDGLGKAGKTEEALELLNVMINKGITPNTIIYSSMASALSREGRTDK 521

Query: 556 AYKLWQKLIEWKV 568
             +++  + +  V
Sbjct: 522 IIQMFDSIQDATV 534


>gi|296081530|emb|CBI20053.3| unnamed protein product [Vitis vinifera]
          Length = 634

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 205/394 (52%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GKL  A + I  M      P+      +I G      IE A ++L  M
Sbjct: 229 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 288

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G  PD+ TY  ++ G+CK G++  A  L D+M   G  P+ +TYNT++    + G  
Sbjct: 289 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 348

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A  +  + ++KG  P + TY +L+  +  +  +  A +++ +M  +G  PD +TYN L
Sbjct: 349 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 408

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   + G    A  + N +LS+G+EP  +TY +L++ L  R      D + + + +   
Sbjct: 409 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 468

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP V  +N +++G C  G V+RA     +M  K+  PD VT+NT++   C+EG + EA  
Sbjct: 469 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 528

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +      P  I+YNTLI G  ++G ++ A  +  +M+  G +P  +T+  LI   C
Sbjct: 529 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 588

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           +  + + A +LLKE+  +G    +S Y  +I G+
Sbjct: 589 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 622



 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 225/450 (50%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C   +  +A K   +M  +  +P    C +++   ++++R+E A  +   M         
Sbjct: 168 CELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTV 227

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            T+N+MV  LCK G+++ A   +  M   G +P+V++YNTI+      G  + A      
Sbjct: 228 YTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDA 287

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
              KG  P   TY  LI  +CK+  +  A  + D M   G  P+ VTYN+L++  C +G 
Sbjct: 288 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 347

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            + A    + ++ +G+ P+  TYN L+H+L   G     D ++  M +    P   TYNI
Sbjct: 348 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 407

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING  + G   +A +  N+M+SK  +P  VTY +++  L +   + EA  L   +    
Sbjct: 408 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 467

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            SP +I +N ++DG    G +E+A +L  +M    + PD++T  TL+ G CR  +VEEA 
Sbjct: 468 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 527

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            LL E+ +RG K  + +Y  +I G  +   +  A +V + M+S  + P    ++ ++K +
Sbjct: 528 MLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCL 587

Query: 548 ADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
             +   + A +L ++++   +    +T L+
Sbjct: 588 CKNQEGDLAEELLKEMVNKGISPDDSTYLS 617



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 128/445 (28%), Positives = 230/445 (51%), Gaps = 13/445 (2%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMAR---RNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           +T N +L  F    ++  A  L   M R    + +  F+  +N+   L +  +++KA + 
Sbjct: 193 ETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTVYTFNIMVNV---LCKEGKLKKAREF 249

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           +  M   G  P+ ++YN ++ G   RG I  A  +LD M V G EPD  TY +++  M  
Sbjct: 250 IGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCK 309

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+ ++A G +   +  G  P  +TY  LI+  C +  + RA    D+M  +G  P + T
Sbjct: 310 EGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVST 369

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN LV+    +G+  +A  +I  +  +G+ P++ITYN L++  G   C +A  K  D+ N
Sbjct: 370 YNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN--GYSRCGNA-KKAFDLHN 426

Query: 355 E---ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           E       PT  TY  LI  L +   +  A + F +++ +   PD++ +N ++   C  G
Sbjct: 427 EMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANG 486

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +  A  LL  ++  S  P  +T+NTL+ G  ++G +E+A +L  +M   GI PD I++ 
Sbjct: 487 NVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYN 546

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           TLI G+ R   +++A  +  E+   G       Y  +I  LCK+++ D+A ++L+ M++ 
Sbjct: 547 TLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNK 606

Query: 532 RYKPDDTVFSTIVKKVAD-DGMTEE 555
              PDD+ + ++++ + + D + E+
Sbjct: 607 GISPDDSTYLSLIEGMGNVDTLVED 631



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 192/380 (50%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           V  +I ++++V   C+  +   A      M   G  P + T N +L       + + A  
Sbjct: 154 VKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWV 213

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            + +  R      + T+ I++  +CK+  + +A E +  M   G  P++V+YN++++   
Sbjct: 214 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 273

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
            +G  + A  +++ +  +G+EP+S TY +L+  +   G  +    + D M E    P   
Sbjct: 274 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 333

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN LI+G C  G ++RA +  ++MV K   P + TYN ++ AL  EG + EA  ++  +
Sbjct: 334 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 393

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P  ITYN LI+G ++ G  +KA  L+ +M+  GI P  +T+ +LI+   R +++
Sbjct: 394 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 453

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA DL ++I  +G       +  ++ G C +  V+ A  +L+ M      PD+  F+T+
Sbjct: 454 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 513

Query: 544 VKKVADDGMTEEAYKLWQKL 563
           ++    +G  EEA  L  ++
Sbjct: 514 MQGRCREGKVEEARMLLDEM 533



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 144/311 (46%)

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           I + +L+   C+      A +    M  +G  P I T N +++   K  + + A ++   
Sbjct: 158 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 217

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +    +     T+N +++ L   G      + +  M      P V +YN +I+G    G 
Sbjct: 218 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 277

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           ++ A    + M  K  +PD  TY +++  +CKEG L EA  L   +      P  +TYNT
Sbjct: 278 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 337

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LIDG   KG +E+A     +M++ GI P   T+  L+       ++ EA D++KE+ K+G
Sbjct: 338 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 397

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y ++I+G  +      A  +   M+S   +P    +++++  ++     +EA 
Sbjct: 398 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 457

Query: 558 KLWQKLIEWKV 568
            L++K+++  V
Sbjct: 458 DLFEKILDQGV 468



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 112/224 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +   G    A  L + M  +   P      +LI  L R +R+++A  + 
Sbjct: 401 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 460

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + ++  G  PD I +N MV G C  G +  A  LL EM      PD +T+NT+++     
Sbjct: 461 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 520

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK ++A     +  R+G  P  I+Y  LI    ++  I  A  V D+M   G +P ++TY
Sbjct: 521 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 580

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           N+L+   CK  + D A  ++  ++++G+ P+  TY +L+  +G+
Sbjct: 581 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 624



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 63/129 (48%), Gaps = 2/129 (1%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLI 163
           L   D   V  DE T N ++Q  C  GK+ +A  L+D M RR   PD H   N LI G  
Sbjct: 495 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD-HISYNTLISGYG 553

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           R   I+ A +V   M+  G  P  +TYN ++  LCK  +   A  LL EM   G  PD  
Sbjct: 554 RRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDS 613

Query: 224 TYNTILRTM 232
           TY +++  M
Sbjct: 614 TYLSLIEGM 622


>gi|18407969|ref|NP_564822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806279|sp|Q9SH60.2|PP103_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g64100
 gi|332196071|gb|AEE34192.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 666

 Score =  214 bits (546), Expect = 7e-53,   Method: Compositional matrix adjust.
 Identities = 129/458 (28%), Positives = 227/458 (49%), Gaps = 19/458 (4%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++ FC   KL+ +      + +    PD      L+ GL   DRI +A  +   MV 
Sbjct: 145 NILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALFGYMVE 204

Query: 181 SGGV---------------PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           +G +               P  IT+N ++ GLC  G++  A AL+++M   G   DV+TY
Sbjct: 205 TGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTY 264

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
            TI+  M   G  K A+            P ++ Y+ +I+++CK    + A  +  +M  
Sbjct: 265 GTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLE 324

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +G +P++ TYN +++  C  G++ DA  ++ +++ R + P+ +T+N L+ +    G    
Sbjct: 325 KGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFE 384

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
            +K+ D M      P   TYN +I G CK+   D A + F+ M S    PD+VT+NT++ 
Sbjct: 385 AEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIID 440

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             C+   ++E +QLL  ++         TYNTLI G  +   +  A  L+ +M+ +G+ P
Sbjct: 441 VYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCP 500

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D IT   L++GFC  +++EEA++L + I      +   AY ++IHG+CK  KVD A  + 
Sbjct: 501 DTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLF 560

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             +     +PD   ++ ++          +A  L+ K+
Sbjct: 561 CSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKM 598



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 42/459 (9%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           +A  L D M      P       LI GL    R+ +A+ ++  MV  G   D +TY  +V
Sbjct: 209 EAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIV 268

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            G+CK G  +SA+ LL +M  +  +PDV+ Y+ I+  +  +G    A   + + L KG  
Sbjct: 269 NGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIA 328

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P + TY  +I+  C     + A  +L DM     +PD++T+N+L++ S K+GK  +A  +
Sbjct: 329 PNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKL 388

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF----------- 363
            + +L R + P+++TYN++++       +D    + D+M  AS     F           
Sbjct: 389 CDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLM--ASPDVVTFNTIIDVYCRAK 446

Query: 364 ----------------------TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
                                 TYN LI+G C+   ++ A + F +M+S    PD +T N
Sbjct: 447 RVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCN 506

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            +L   C+   L EAL+L  ++  S      + YN +I G+ K   +++A  L+  +  +
Sbjct: 507 ILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIH 566

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G+ PD  T+  +I GFC    + +A  L  ++   G++  NS Y  +I G  K+ ++D +
Sbjct: 567 GVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKS 626

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVAD---DGMTEEAY 557
           I+++  M S+ +  D    +  +K VAD   DG  ++++
Sbjct: 627 IELISEMRSNGFSGD----AFTIKMVADLITDGRLDKSF 661



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 180/392 (45%), Gaps = 6/392 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+   C  G    A  L+  M   +  PD      +I  L +      A  + 
Sbjct: 260 DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 319

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+  TYN M+ G C  G+   A  LL +M      PDV+T+N ++      
Sbjct: 320 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 379

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A     + L +   P  +TY  +I   CK      A  + D MA    SPD+VT+
Sbjct: 380 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTF 435

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++  C+  + D+ + ++  +  RG+  N+ TYNTL+H        +A   +   M  
Sbjct: 436 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 495

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   T NIL+ G C+   ++ A+  F  +       D V YN ++  +CK   ++E
Sbjct: 496 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 555

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   L      P + TYN +I G   K  +  A VL+ +M +NG  PD+ T+ TLI 
Sbjct: 556 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 615

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           G  +A +++++++L+ E+  R N     A+ +
Sbjct: 616 GCLKAGEIDKSIELISEM--RSNGFSGDAFTI 645



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 217/460 (47%), Gaps = 51/460 (11%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L DA    D M R         C  +I   +R++R + A  + + M +     +  ++N+
Sbjct: 87  LDDAIDFFDYMVRSRPFYTAVDCNKVIGVFVRMNRPDVAISLYRKMEIRRIPLNIYSFNI 146

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++   C   ++  +++   +++  G +PDV+T+NT+L  +    +  +A+  +       
Sbjct: 147 LIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLHGLCLEDRISEALALF------- 199

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
              Y++           + G   A+ + D M   G +P ++T+N+L+N  C +G+  +A 
Sbjct: 200 --GYMV-----------ETGFLEAVALFDQMVEIGLTPVVITFNTLINGLCLEGRVLEAA 246

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            ++N ++ +G+  + +TY T+++ +   G   +   +L  M E    P V  Y+ +I+ L
Sbjct: 247 ALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRL 306

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G    A   F++M+ K   P++ TYN ++   C  G  ++A +LL  +     +P +
Sbjct: 307 CKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDV 366

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF--------------- 477
           +T+N LI    K+G + +A  L  +M+   I PD +T+ ++I+GF               
Sbjct: 367 LTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDL 426

Query: 478 ----------------CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
                           CRA +V+E + LL+EI +RG     + Y  +IHG C+   ++ A
Sbjct: 427 MASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAA 486

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             + + MIS    PD    + ++    ++   EEA +L++
Sbjct: 487 QDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFE 526



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 138/303 (45%), Gaps = 5/303 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++      GKL +A KL D M  R   PD     ++I G  + +R + A  + 
Sbjct: 365 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 424

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M      PD +T+N ++   C+  ++   + LL E+S  G   +  TYNT++    + 
Sbjct: 425 DLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 480

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A   +++ +  G  P  IT  IL+   C+   +  A+E+ + + +     D V Y
Sbjct: 481 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 540

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N +++  CK  K D+A  +  +L   G+EP+  TYN ++     +      + +   M +
Sbjct: 541 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 600

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             H P   TYN LI G  K G +D++I   ++M S     D  T   V   L  +G L++
Sbjct: 601 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV-ADLITDGRLDK 659

Query: 416 ALQ 418
           +  
Sbjct: 660 SFS 662



 Score =  110 bits (274), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 139/299 (46%), Gaps = 20/299 (6%)

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           AI +   M I     +I ++N L+   C   K   ++     L   G +P+ +T+NTLLH
Sbjct: 125 AISLYRKMEIRRIPLNIYSFNILIKCFCDCHKLSFSLSTFGKLTKLGFQPDVVTFNTLLH 184

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L    C +  D+I       S +  +F Y      + + G ++ A+  F+QMV     P
Sbjct: 185 GL----CLE--DRI-------SEALALFGY------MVETGFLE-AVALFDQMVEIGLTP 224

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
            ++T+NT++  LC EG + EA  L++ + G      ++TY T+++G+ K G  + A+ L 
Sbjct: 225 VVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLL 284

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M E  I PD + +  +I   C+     +A  L  E+ ++G       Y  +I G C  
Sbjct: 285 SKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSF 344

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            +   A ++L  MI     PD   F+ ++     +G   EA KL  +++   +F    T
Sbjct: 345 GRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVT 403


>gi|255548724|ref|XP_002515418.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545362|gb|EEF46867.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1113

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 136/483 (28%), Positives = 229/483 (47%), Gaps = 36/483 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           KT + ++     R        L++ M      P+ +     IR L R  RI++A ++++ 
Sbjct: 230 KTFSALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKR 289

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD +TY +++  LC  G++  A+ L  +M  S  +PD +TY T+L    D G 
Sbjct: 290 MEDDGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGD 349

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +   FW +    G  P +IT+TIL+  +CK   I  A  +LD M  +G  P++ TYN+
Sbjct: 350 LGRVKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNT 409

Query: 298 LVNFSCKQGKYDDAVLVINNLLS-----------------------------------RG 322
           L++   +  + DDA+ + NN+ +                                   RG
Sbjct: 410 LISGLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRG 469

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + PN +  N  L+SL   G       I + +     +P   TYN+++    K G VD AI
Sbjct: 470 IAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAI 529

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
              + M    C+PDI+  N+++  L K G ++EA ++   L     +P ++TYNTLI GL
Sbjct: 530 ELLSDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGL 589

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+G +++AM L+  M  NG  P+ IT  T++   C+ D+V+ A+ +L ++         
Sbjct: 590 GKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDV 649

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             +  +IHGL   K+V  AI +   M      PD     T++  V  +G+ E+A+K+ + 
Sbjct: 650 LTFNTIIHGLVIEKRVSDAIWLFHQM-KKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAED 708

Query: 563 LIE 565
            + 
Sbjct: 709 FVH 711



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 184/380 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C+ GKL DA +L   M   +  PD    I ++        + +  +  
Sbjct: 298 DVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGRVKEFW 357

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD IT+ ++V  LCK G I  A  LLD M   G  P++ TYNT++  +   
Sbjct: 358 SEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRV 417

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +   A+  + +    G  P   TY + I+   K     +A+E  + M I G +P+IV  
Sbjct: 418 NRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVAC 477

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+ +    + G+  +A ++ N L S G+ P+S+TYN ++      G  D   ++L  M+E
Sbjct: 478 NASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSE 537

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P +   N LIN L K G VD A   F ++      P +VTYNT++  L KEG +  
Sbjct: 538 NQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQR 597

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A++L   + G+ C P  IT+NT++D L K   ++ A+ +  +M      PD +T  T+I 
Sbjct: 598 AMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIH 657

Query: 476 GFCRADQVEEAVDLLKEIGK 495
           G     +V +A+ L  ++ K
Sbjct: 658 GLVIEKRVSDAIWLFHQMKK 677



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 122/486 (25%), Positives = 220/486 (45%), Gaps = 38/486 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G + +A  L+D+M ++  +P+ H    LI GL+R++R++ A  + 
Sbjct: 368 DVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLISGLLRVNRLDDALDLF 427

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G VP   TY + +    K G+   A+   ++M + G  P+++  N  L ++ + 
Sbjct: 428 NNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAPNIVACNASLYSLAEM 487

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ ++A   +      G  P  +TY ++++   K   +  AIE+L DM+   C PDI+  
Sbjct: 488 GRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVI 547

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NSL+N   K G+ D+A  +   L    + P  +TYNTL+  LG  G      ++   M  
Sbjct: 548 NSLINTLYKAGRVDEAWKMFCRLKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTG 607

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   T+N +++ LCK   VD A+    +M + NC PD++T+NT++  L  E  +++
Sbjct: 608 NGCPPNTITFNTILDCLCKNDEVDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSD 667

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL---------------YGQMME 460
           A+ L H +     +P  +T  TL+ G+ K G ME A  +               + + + 
Sbjct: 668 AIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLM 726

Query: 461 NGISPDDITHRTLIWG---------------------FCRADQVEEAVDLLKEIGKR-GN 498
            GI     T +T+++G                      C+  Q   A  +     K  G 
Sbjct: 727 GGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGV 786

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           K    +Y  +I G       +MA  +   M ++   PD   ++ ++      G   E ++
Sbjct: 787 KPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFE 846

Query: 559 LWQKLI 564
           L++++I
Sbjct: 847 LYEQMI 852



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 221/463 (47%), Gaps = 4/463 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRI 165
           ++ PFV +  +T N +L+      ++ D   + ++M  +NQI   D +  + + +GL   
Sbjct: 115 AEMPFVVHTTETCNHMLEILRIHRRVGDMVVVFNLM--QNQIIKRDLNTYLIIFKGLFIR 172

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
             + +       M  +G   +  +YN ++  L + G  R A+ +   M + G +P + T+
Sbjct: 173 GGLRQTPFAFGKMREAGFHLNAYSYNGLIHLLLQSGLCREALEMYRRMVLEGLKPSLKTF 232

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           + ++         +      ++    G  P + TYTI I  + +   I  A  ++  M  
Sbjct: 233 SALMVATGKRRDTETVKSLLEEMESLGLKPNIYTYTICIRVLGRAGRIDEACRIMKRMED 292

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +GC PD+VTY  L++  C  GK DDA+ +   + +   +P+ +TY T+L      G    
Sbjct: 293 DGCGPDVVTYTVLIDALCTAGKLDDAMELFVKMKASSHKPDRVTYITMLDKFSDCGDLGR 352

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
           V +    M    ++P V T+ IL+N LCK G +D A +  + M  +   P++ TYNT++ 
Sbjct: 353 VKEFWSEMEADGYAPDVITFTILVNALCKAGNIDEAFHLLDVMRKQGVLPNLHTYNTLIS 412

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            L +   L++AL L + +      P   TY   ID   K G  +KA+  + +M   GI+P
Sbjct: 413 GLLRVNRLDDALDLFNNMETLGVVPTAYTYILFIDFYGKSGRSDKALETFEKMKIRGIAP 472

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           + +     ++      ++ EA  +   +   G    +  Y +++    K+ +VD AI++L
Sbjct: 473 NIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTYNMMMKCYSKAGQVDEAIELL 532

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             M  ++ +PD  V ++++  +   G  +EA+K++ +L + K+
Sbjct: 533 SDMSENQCEPDIIVINSLINTLYKAGRVDEAWKMFCRLKDMKL 575



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 124/463 (26%), Positives = 202/463 (43%), Gaps = 3/463 (0%)

Query: 84   VLAVNKKLRGLTITKKSHDPS-LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLI-D 141
            VL  N  + GL I K+  D   L       +  D  T   +L      G + DA K+  D
Sbjct: 649  VLTFNTIIHGLVIEKRVSDAIWLFHQMKKMLTPDCVTLCTLLPGVVKNGLMEDAFKIAED 708

Query: 142  IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
             + R     D  F  +L+ G++     EK       +V      D      ++  LCK  
Sbjct: 709  FVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMPIIKVLCKHK 768

Query: 202  QIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
            Q   A ++    +   G +P + +YN ++         + A   + +    GC P + TY
Sbjct: 769  QALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNAGCAPDVFTY 828

Query: 261  TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
             +L++   K   I    E+ + M    C P+ +T+N ++    K    D A+ +  +L+S
Sbjct: 829  NLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKALDLFYDLVS 888

Query: 321  RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
                P   TY  LL  L   G  +   ++ + M +    P    YNILING  K G V+ 
Sbjct: 889  GDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILINGFGKTGDVNT 948

Query: 381  AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
            A   F +MV +  +PD+ +Y +++G LC+ G +++AL     L  +      I YN +ID
Sbjct: 949  ACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLDSIAYNLMID 1008

Query: 441  GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
            GL +   +E+A+ LY +M   GI+PD  T+ +LI     A  VE+A  L +E+   G + 
Sbjct: 1009 GLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYEELQFIGLEP 1068

Query: 501  RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
                Y  +I G   S   D A  V + M+     P+   F+ +
Sbjct: 1069 NVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGCSPNTGTFAQL 1111



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 215/482 (44%), Gaps = 38/482 (7%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N ++      G++  A +L   M      P+      ++  L + D ++ A K+L  M
Sbjct: 581  TYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDEVDLALKMLYKM 640

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 +PD +T+N ++ GL    ++  AI L  +M      PD +T  T+L  +  NG  
Sbjct: 641  TTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMK-KMLTPDCVTLCTLLPGVVKNGLM 699

Query: 239  KQAIG----------------FWKDQLRKGCPPYLITYTIL------------------- 263
            + A                  FW+D +           TIL                   
Sbjct: 700  EDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILFGDRLVCGRVCKDGSVLMP 759

Query: 264  -IEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
             I+ +CK      A  V      E G  P + +YN L+         + A  +   + + 
Sbjct: 760  IIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFLGVHNDEMAWNLFTEMKNA 819

Query: 322  GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            G  P+  TYN LL + G  G  + + ++ + M  +S  P   T+NI+I  L K   +D+A
Sbjct: 820  GCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTITHNIIIANLVKSNSLDKA 879

Query: 382  INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
            ++ F  +VS +  P   TY  +L  L K G L EA +L   +    C P    YN LI+G
Sbjct: 880  LDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEMVDYGCRPNNAIYNILING 939

Query: 442  LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
              K G +  A  L+ +M+  GI PD  ++ +L+   C A +V++A+   +++ + G  + 
Sbjct: 940  FGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRVDDALHYFEKLKQTGLYLD 999

Query: 502  NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            + AY L+I GL +S +++ A+ + + M S    PD   +++++  +   GM E+A KL++
Sbjct: 1000 SIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSLILNLGVAGMVEQAGKLYE 1059

Query: 562  KL 563
            +L
Sbjct: 1060 EL 1061



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 118/483 (24%), Positives = 222/483 (45%), Gaps = 58/483 (12%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G+   A +  + M  R   P+   C   +  L  + R+ +A  +   +  +G  PD++TY
Sbjct: 453 GRSDKALETFEKMKIRGIAPNIVACNASLYSLAEMGRLREAKVIFNRLKSNGLAPDSVTY 512

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           NMM+    K GQ+  AI LL +MS + CEPD+I  N+++ T++  G+  +A   WK   R
Sbjct: 513 NMMMKCYSKAGQVDEAIELLSDMSENQCEPDIIVINSLINTLYKAGRVDEA---WKMFCR 569

Query: 251 ---KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
                  P ++TY  LI  + K+  + RA+E+   M   GC P+ +T+N++++  CK  +
Sbjct: 570 LKDMKLAPTVVTYNTLIAGLGKEGQVQRAMELFASMTGNGCPPNTITFNTILDCLCKNDE 629

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLG-----SRGCW--DAVDKILDIMNEASHSP 360
            D A+ ++  + +    P+ +T+NT++H L      S   W    + K+L        +P
Sbjct: 630 VDLALKMLYKMTTMNCMPDVLTFNTIIHGLVIEKRVSDAIWLFHQMKKML--------TP 681

Query: 361 TVFTYNILINGLCKYGLVDRA-------INSFNQMVSKNCQPDIV--------TYNTVL- 404
              T   L+ G+ K GL++ A       ++     V +    D++        T  T+L 
Sbjct: 682 DCVTLCTLLPGVVKNGLMEDAFKIAEDFVHRLGVYVDRRFWEDLMGGILTQAGTEKTILF 741

Query: 405 ------GALCKEGML-----------NEALQ----LLHLLNGSSCSPCLITYNTLIDGLA 443
                 G +CK+G +            +AL      +         P L +YN LI+G  
Sbjct: 742 GDRLVCGRVCKDGSVLMPIIKVLCKHKQALVAQSVFIRFTKELGVKPTLESYNFLIEGFL 801

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
                E A  L+ +M   G +PD  T+  L+    ++ ++ E  +L +++     K    
Sbjct: 802 GVHNDEMAWNLFTEMKNAGCAPDVFTYNLLLDAHGKSGKINELFELYEQMICSSCKPNTI 861

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            + ++I  L KS  +D A+ +   ++S  + P    +  ++  +   G  EEA +L++++
Sbjct: 862 THNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEM 921

Query: 564 IEW 566
           +++
Sbjct: 922 VDY 924



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 67/252 (26%), Positives = 116/252 (46%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T+N I+ N      L  A  L   +   +  P       L+ GL++  R+E+A ++ + M
Sbjct: 862  THNIIIANLVKSNSLDKALDLFYDLVSGDFSPTPCTYGPLLDGLLKSGRLEEAKELFEEM 921

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            V  G  P+   YN+++ G  K G + +A  L   M   G  PD+ +Y +++  + + G+ 
Sbjct: 922  VDYGCRPNNAIYNILINGFGKTGDVNTACELFKRMVREGIRPDLKSYTSLVGCLCEAGRV 981

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
              A+ +++   + G     I Y ++I+ + +   I  A+ + D+M   G +PD+ TYNSL
Sbjct: 982  DDALHYFEKLKQTGLYLDSIAYNLMIDGLGRSHRIEEALTLYDEMQSRGINPDLFTYNSL 1041

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            +      G  + A  +   L   G+EPN  TYN L+      G  D+   +   M     
Sbjct: 1042 ILNLGVAGMVEQAGKLYEELQFIGLEPNVFTYNALIRGYSMSGNSDSAYAVYKRMMVGGC 1101

Query: 359  SPTVFTYNILIN 370
            SP   T+  L N
Sbjct: 1102 SPNTGTFAQLPN 1113


>gi|449438705|ref|XP_004137128.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 225/468 (48%), Gaps = 35/468 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++++ C   +  +A +    M  +  +P    C +L+   ++++R E A  +   M    
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
                 T+N+M+  LCK G+++ A   +  M  SG +P+++TYNTI+     +G+ + A 
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                  R+   P   TY  LI  +CKQ  +  A ++ ++M  +G  P  V YN+L++  
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +G  D A    + +L +G+ P   TYN+L+H+L      D  + ++  + E   SP  
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYNILING C+     +A    ++M++   +P   TY ++L  L K+  + EA  L   
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P +I +N LIDG      ++ A  L   M    + PD++T  T++ G CR  +
Sbjct: 457 ITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516

Query: 483 VEEAVDLLKEIGKRGNK------------------------MRNS-----------AYRL 507
           VEEA +L  E+ +RG K                        +RN             Y  
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           ++ GLCK+++ D+A ++L+ M+S    PDDT + T+++ +A   + +E
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 112/396 (28%), Positives = 191/396 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GKL  A   +  M      P+      ++ G     R+E A  +L  M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 PD+ TY  ++ G+CK+G++  A  + +EM   G  P  + YNT++    + G  
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  +  + L+KG  P + TY  LI  +  +     A  ++ ++  +G SPD +TYN L
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C+      A L+ + +L+ G++P   TY +LLH L  +      D +   +     
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V  +N LI+G C    V  A      M      PD VT+NT++   C+EG + EA +
Sbjct: 463 LPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P  I++NTLI G +++G ++ A  +  +M++ G +P  +T+  L+ G C
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +  + + A +LLKE+  +G    ++ Y  +I G+ K
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 188/367 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+  +CS G++  A  ++  M R+   PD     +LI G+ +  R+E+ASK+ + M
Sbjct: 258 TYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM 317

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P  + YN ++ G C +G +  A A  DEM   G  P + TYN+++  +F   + 
Sbjct: 318 VQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRT 377

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A    K+   KG  P  ITY ILI   C+     +A  + D+M   G  P   TY SL
Sbjct: 378 DEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSL 437

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+ +  +A  +   + S G+ P+ I +N L+    S        ++L  M+    
Sbjct: 438 LHVLSKKNRMKEADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   T+N ++ G C+ G V+ A   F++M  +  +PD +++NT++    + G + +A +
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           + + +  +  +P ++TYN L+ GL K    + A  L  +M+  G++PDD T+ TLI G  
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617

Query: 479 RADQVEE 485
           + +  +E
Sbjct: 618 KVNIPDE 624



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 215/438 (49%), Gaps = 9/438 (2%)

Query: 132 KLTDASKL---IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG---GVP 185
           KL+DA  L   I I+AR   +P     ++L++  +         ++ + +  S    G  
Sbjct: 93  KLSDARTLCLAIVIVAR---LPSPKPALHLLKQALGGGTTNSIREIFEFLAASRDRLGFK 149

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
            +I ++ ++   C   +   A      M   G  P + T N++L       + + A   +
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            +  R      + T+ I+I  +CK+  + +A + +  M   G  P+IVTYN++V+  C  
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G+ + A  ++  +  + +EP+S TY +L+  +  +G  +   KI + M +    P+   Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N LI+G C  G +D A    ++M+ K   P + TYN+++ AL  E   +EA  ++  +  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
              SP  ITYN LI+G  +    +KA +L+ +M+ +GI P   T+ +L+    + ++++E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A DL K+I   G       +  +I G C +  V  A ++L+ M   +  PD+  F+TI++
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 546 KVADDGMTEEAYKLWQKL 563
               +G  EEA +L+ ++
Sbjct: 510 GHCREGKVEEARELFDEM 527



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 80/299 (26%), Positives = 130/299 (43%), Gaps = 35/299 (11%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC++G L  AS   D M ++   P      +LI  L    R ++A  +++ +  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP-------------------- 220
            G  PD ITYN+++ G C+    + A  L DEM  SG +P                    
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 221 ---------------DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                          DVI +N ++     N   K A    KD  R   PP  +T+  +++
Sbjct: 450 ADDLFKKITSEGVLPDVIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             C++  +  A E+ D+M   G  PD +++N+L++   ++G   DA  V N +L  G  P
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
             +TYN L+  L      D  +++L  M     +P   TY  LI G+ K  + D   N+
Sbjct: 570 TVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKNT 628



 Score = 75.9 bits (185), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           V  DE T N I+Q  C  GK+ +A +L D M RR   PD H   N LI G  R   I+ A
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD-HISFNTLISGYSRRGDIKDA 555

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
            +V   M+ +G  P  +TYN +V GLCK  +   A  LL EM   G  PD  TY T++ 
Sbjct: 556 FRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIE 614



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 79/168 (47%)

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           + ++ ++ + C     +EA +  + +      P + T N+L+    K    E A VLY +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M    I     T   +I   C+  ++++A D +  +   G K     Y  ++HG C S +
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           V+ A  +L  M   + +PD   + +++  +   G  EEA K+++++++
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ 319


>gi|297737176|emb|CBI26377.3| unnamed protein product [Vitis vinifera]
          Length = 572

 Score =  214 bits (546), Expect = 8e-53,   Method: Compositional matrix adjust.
 Identities = 127/429 (29%), Positives = 221/429 (51%), Gaps = 1/429 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D KT   ++   C   K   A KL + M    +   F + + +I  L +     +A  + 
Sbjct: 111 DAKTYGILINGLCKARKTGLAIKLHEKMKGNCKGDVFTYGM-IIDSLCKDGMTTEALDMF 169

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ +G +PD + Y+ ++ GLC+ G+++ A+    EM   G   DV TYN+++  +   
Sbjct: 170 SEMIGAGILPDVVVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRA 229

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G +K+   F    + +G  P   T+TILI+ +CK+  +  A ++L+ M  +G  PDI+TY
Sbjct: 230 GLWKEVTWFLNLMVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTY 289

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  C  G+ +DA  +  +L  RG++ N  +YN L++        D   ++ + M  
Sbjct: 290 NTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRP 349

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P+  TYN LI  LC+ G V  A   F +M +      + TY  +L  LCK G L E
Sbjct: 350 KGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEE 409

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ L   +  +   P +  ++ L+DG+ + G +E+A   + ++ +NG+ PD I +  LI 
Sbjct: 410 AIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILIN 469

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C    + EAV LL ++ ++G    +  + ++I  L K  ++  AIQ+LE M +  + P
Sbjct: 470 GLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSP 529

Query: 536 DDTVFSTIV 544
           D+ V S ++
Sbjct: 530 DEAVTSMLL 538



 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 119/382 (31%), Positives = 200/382 (52%), Gaps = 1/382 (0%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD +T   +V G+     I  A+ L DEM+  G   D  TY  ++  +    K   A
Sbjct: 72  GFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLA 131

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           I    ++++  C   + TY ++I+ +CK      A+++  +M   G  PD+V Y+SL++ 
Sbjct: 132 IKL-HEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDG 190

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+ G+  +A+     +  RG+  +  TYN+L+H L   G W  V   L++M +   SP 
Sbjct: 191 LCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPD 250

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            FT+ ILI+GLCK G V  A      M  K  +PDI+TYNT++  LC  G L +A +L  
Sbjct: 251 AFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFE 310

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L        + +YN LI+G  K   +++A  L+ +M   G+ P  +T+ TLI   C++ 
Sbjct: 311 SLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSG 370

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V  A  L  E+   G  ++ S Y +++ GLCK+  ++ AI + + +  + +KP+  VFS
Sbjct: 371 RVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFS 430

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
            ++  +   G  EEA+K + ++
Sbjct: 431 ILLDGMCRAGKLEEAWKQFDEI 452



 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 137/451 (30%), Positives = 224/451 (49%), Gaps = 3/451 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   +++       + DA +L D M  +    D      LI GL +  +   A K
Sbjct: 74  EPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTGLAIK 133

Query: 174 VLQIMVMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           + +   M G    D  TY M++  LCK G    A+ +  EM  +G  PDV+ Y++++  +
Sbjct: 134 LHE--KMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLMDGL 191

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+ K+A+ F+K+   +G    + TY  LI  + +          L+ M   G SPD 
Sbjct: 192 CRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDA 251

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+  L++  CK+GK  +A  ++  +  +G EP+ +TYNTL++ L   G  +   K+ + 
Sbjct: 252 FTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFES 311

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + +      VF+YNILING CK   +D A   F +M  K  +P  VTYNT++GALC+ G 
Sbjct: 312 LADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGR 371

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +  A +L   +        L TY  L+DGL K G +E+A+ L+  + +    P+      
Sbjct: 372 VRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSI 431

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G CRA ++EEA     EI K G +    AY ++I+GLC    +  A+++L  M    
Sbjct: 432 LLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKG 491

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             PD   F+ I++ +  +    EA +L +++
Sbjct: 492 CLPDSITFNVIIQNLLKENEIHEAIQLLEEM 522



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 116/428 (27%), Positives = 217/428 (50%), Gaps = 6/428 (1%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
           +R   PD      L++G+   + I  A ++   M   G   D  TY +++ GLCK  +  
Sbjct: 70  KRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKTG 129

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
            AI L ++M    C+ DV TY  I+ ++  +G   +A+  + + +  G  P ++ Y+ L+
Sbjct: 130 LAIKLHEKMK-GNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSLM 188

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           + +C+   +  A+E   +M   G S D+ TYNSL++   + G + +    +N ++ RG  
Sbjct: 189 DGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFS 248

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P++ T+  L+  L   G      +IL++M+     P + TYN L+NGLC  G ++ A   
Sbjct: 249 PDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKL 308

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F  +  +  + ++ +YN ++   CK+  ++EA +L   +      P  +TYNTLI  L +
Sbjct: 309 FESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQ 368

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G +  A  L+ +M   G      T+  L+ G C+   +EEA+DL + I K  +K     
Sbjct: 369 SGRVRTAQKLFVEMQTCGQFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEV 428

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + +++ G+C++ K++ A +  + +  +  +PD   ++ ++  + + GM  EA KL     
Sbjct: 429 FSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLL---- 484

Query: 565 EWKVFEKG 572
            W++ EKG
Sbjct: 485 -WQMEEKG 491



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 160/315 (50%), Gaps = 1/315 (0%)

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           L++G  P  +T T L++ V  + GI  A+++ D+M  +G   D  TY  L+N  CK  K 
Sbjct: 69  LKRGFEPDAVTVTTLVKGVWMENGIPDAVQLFDEMTEKGLFGDAKTYGILINGLCKARKT 128

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             A+  ++  +    + +  TY  ++ SL   G       +   M  A   P V  Y+ L
Sbjct: 129 GLAI-KLHEKMKGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDVVVYSSL 187

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           ++GLC++G +  A+  F +M  +    D+ TYN+++  L + G+  E    L+L+     
Sbjct: 188 MDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGF 247

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           SP   T+  LIDGL K+G + +A  +   M   G  PD +T+ TL+ G C   Q+E+A  
Sbjct: 248 SPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATK 307

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L + +  RG K+   +Y ++I+G CK +K+D A ++ E M     KP    ++T++  + 
Sbjct: 308 LFESLADRGIKLNVFSYNILINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALC 367

Query: 549 DDGMTEEAYKLWQKL 563
             G    A KL+ ++
Sbjct: 368 QSGRVRTAQKLFVEM 382



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/323 (28%), Positives = 163/323 (50%), Gaps = 2/323 (0%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDR 167
           +G  +  D  T N ++      G   + +  +++M  R   PD F F I LI GL +  +
Sbjct: 208 EGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNLMVDRGFSPDAFTFTI-LIDGLCKEGK 266

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +A ++L++M   G  PD +TYN ++ GLC  GQ+  A  L + ++  G + +V +YN 
Sbjct: 267 VGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQLEDATKLFESLADRGIKLNVFSYNI 326

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++     + K  +A   +++   KG  P  +TY  LI  +C+   +  A ++  +M   G
Sbjct: 327 LINGYCKDQKIDEAFRLFEEMRPKGLKPSTVTYNTLIGALCQSGRVRTAQKLFVEMQTCG 386

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
               + TY  L++  CK G  ++A+ +  ++     +PN   ++ LL  +   G  +   
Sbjct: 387 QFLKLSTYCVLLDGLCKNGHLEEAIDLFQSIKKTEHKPNIEVFSILLDGMCRAGKLEEAW 446

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           K  D +++    P    YNILINGLC  G++  A+    QM  K C PD +T+N ++  L
Sbjct: 447 KQFDEISKNGLEPDTIAYNILINGLCNKGMLSEAVKLLWQMEEKGCLPDSITFNVIIQNL 506

Query: 408 CKEGMLNEALQLLHLLNGSSCSP 430
            KE  ++EA+QLL  +   + SP
Sbjct: 507 LKENEIHEAIQLLEEMRNRNFSP 529



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 88/253 (34%), Positives = 135/253 (53%), Gaps = 13/253 (5%)

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCW------DAVDKILDIMNEASHSPTVFTYNILINGL 372
           L RG EP+++T  TL+     +G W      DAV ++ D M E        TY ILINGL
Sbjct: 69  LKRGFEPDAVTVTTLV-----KGVWMENGIPDAV-QLFDEMTEKGLFGDAKTYGILINGL 122

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK      AI    +M   NC+ D+ TY  ++ +LCK+GM  EAL +   + G+   P +
Sbjct: 123 CKARKTGLAIKLHEKM-KGNCKGDVFTYGMIIDSLCKDGMTTEALDMFSEMIGAGILPDV 181

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           + Y++L+DGL + G +++A+  + +M   GIS D  T+ +LI G  RA   +E    L  
Sbjct: 182 VVYSSLMDGLCRFGRLKEALEFFKEMEGRGISADVYTYNSLIHGLSRAGLWKEVTWFLNL 241

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +  RG       + ++I GLCK  KV  A Q+LELM     +PD   ++T++  +   G 
Sbjct: 242 MVDRGFSPDAFTFTILIDGLCKEGKVGEAQQILELMHHKGKEPDILTYNTLMNGLCLVGQ 301

Query: 553 TEEAYKLWQKLIE 565
            E+A KL++ L +
Sbjct: 302 LEDATKLFESLAD 314



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 54/206 (26%), Positives = 105/206 (50%), Gaps = 2/206 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH-FCINLIRGLIRIDRIEKASKVLQI 177
           T N ++   C  G++  A KL   M    Q      +C+ L+ GL +   +E+A  + Q 
Sbjct: 358 TYNTLIGALCQSGRVRTAQKLFVEMQTCGQFLKLSTYCV-LLDGLCKNGHLEEAIDLFQS 416

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +  +   P+   +++++ G+C+ G++  A    DE+S +G EPD I YN ++  + + G 
Sbjct: 417 IKKTEHKPNIEVFSILLDGMCRAGKLEEAWKQFDEISKNGLEPDTIAYNILINGLCNKGM 476

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+        KGC P  IT+ ++I+ + K+  I  AI++L++M     SPD    + 
Sbjct: 477 LSEAVKLLWQMEEKGCLPDSITFNVIIQNLLKENEIHEAIQLLEEMRNRNFSPDEAVTSM 536

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGM 323
           L+  +    ++  A++ + N L +G+
Sbjct: 537 LLCLASFDPQWHAALVSLPNALQKGV 562


>gi|255583247|ref|XP_002532388.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527912|gb|EEF30000.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 676

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 124/418 (29%), Positives = 209/418 (50%), Gaps = 1/418 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           NL+   +  D +  A  V  +M   G   + ++Y  ++ GLC+ G++   I +  +M   
Sbjct: 10  NLVEANLNND-VNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGINIFKKMRED 68

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
            C P V TY  I+  +F++G+  +AI  + +   +GC P + TYT++I  +CK+  +   
Sbjct: 69  DCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEG 128

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +LD+M  +G  P + TYN+L++  CK+G  + A  +++ + S    PN  TYN L+  
Sbjct: 129 RRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICG 188

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +        +L  M E+  +P+V TYN LI+G CK G +D A    N M      PD
Sbjct: 189 FCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPD 248

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             TY+  +  LCK+G + EA  L + L         + Y  LIDG  K G M+ A  L  
Sbjct: 249 QWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLD 308

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M+     P+  T+  LI G C+  +V+EA+ L++ + ++G K     Y ++I  + K  
Sbjct: 309 RMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEG 368

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             D A ++L+ M+SS Y+PD  +++  +      G  +EA  +   + E  V     T
Sbjct: 369 DFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALT 426



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 112/381 (29%), Positives = 203/381 (53%), Gaps = 9/381 (2%)

Query: 193 MVGGLCKRGQ---------IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           MV G CK G          + SA ++ + M   GC  + ++Y  ++  + + G+  + I 
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVSYTNLIHGLCEVGRVDEGIN 60

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +K      C P + TYT+++  + +      AI +  +M   GC P+I TY  ++N  C
Sbjct: 61  IFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMC 120

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K+ K ++   +++ ++ +G+ P+  TYN L+      G  +A  +ILD+M+  S +P   
Sbjct: 121 KETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNER 180

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN LI G C+   V RA+   ++M+     P +VTYN+++   CK G L+ A +LL+L+
Sbjct: 181 TYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLM 240

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
           N +   P   TY+  ID L KKG +E+A VL+  + E GI  +++ +  LI G+C+A ++
Sbjct: 241 NENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKM 300

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           ++A  LL  +        +S Y  +I GLCK +KV  A+ ++E MI    K     ++ +
Sbjct: 301 DDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTIL 360

Query: 544 VKKVADDGMTEEAYKLWQKLI 564
           +  +  +G  + A+++  +++
Sbjct: 361 IVAMLKEGDFDYAHRILDQMV 381



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 120/456 (26%), Positives = 218/456 (47%), Gaps = 17/456 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMA-------------RRNQIPDFHFCINLIRGLIRIDRIE 169
           ++  +C  G L +A+   D+ +             RRN++       NLI GL  + R++
Sbjct: 1   MVNGYCKLGNLVEANLNNDVNSAFSVFNMMPKKGCRRNEVS----YTNLIHGLCEVGRVD 56

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +   + + M      P   TY ++V  L + G+   AI L  EM   GCEP++ TY  ++
Sbjct: 57  EGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMI 116

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             M    K ++      + + KG  P + TY  LI+  CK+  +  A E+LD M    C+
Sbjct: 117 NAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCN 176

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P+  TYN L+   C++     A+ +++ +L   + P+ +TYN+L+H     G  D+  ++
Sbjct: 177 PNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRL 236

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L++MNE    P  +TY++ I+ LCK G ++ A   FN +  K  + + V Y  ++   CK
Sbjct: 237 LNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCK 296

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G +++A  LL  +    C P   TYN LIDGL K+  +++A++L   M++ G+     T
Sbjct: 297 AGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPT 356

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  LI    +    + A  +L ++   G +     Y   IH  C    +  A  ++ +M 
Sbjct: 357 YTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMF 416

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                PD   ++ ++      G+   A+ + +++ +
Sbjct: 417 ERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFD 452



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 114/440 (25%), Positives = 201/440 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E +   ++   C  G++ +   +   M   +  P       ++  L    R  +A  + 
Sbjct: 38  NEVSYTNLIHGLCEVGRVDEGINIFKKMREDDCYPTVRTYTVIVHALFESGRRMEAINLF 97

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+  TY +M+  +CK  ++     +LDEM   G  P V TYN ++      
Sbjct: 98  SEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDEMVEKGLVPSVPTYNALIDGYCKE 157

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  + A           C P   TY  LI   C++  + RA+ +L  M     +P +VTY
Sbjct: 158 GMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKMLESRLTPSVVTY 217

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NSL++  CK G  D A  ++N +   G+ P+  TY+  + +L  +G  +  + + + + E
Sbjct: 218 NSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSLKE 277

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                    Y  LI+G CK G +D A +  ++M++++C P+  TYN ++  LCKE  + E
Sbjct: 278 KGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKVQE 337

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL L+  +        + TY  LI  + K+G  + A  +  QM+ +G  PD   +   I 
Sbjct: 338 ALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAFIH 397

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            FC    ++EA D++  + +RG       Y LVI        ++ A  VL+ M  +   P
Sbjct: 398 AFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGCDP 457

Query: 536 DDTVFSTIVKKVADDGMTEE 555
               +S ++K +  + +T++
Sbjct: 458 SHHTYSCLIKHLLKEELTKK 477



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 120/454 (26%), Positives = 206/454 (45%), Gaps = 18/454 (3%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T   I+      G+  +A  L   M  R   P+ H    +I  + +  ++E+  ++L  
Sbjct: 75  RTYTVIVHALFESGRRMEAINLFSEMRERGCEPNIHTYTVMINAMCKETKLEEGRRILDE 134

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV  G VP   TYN ++ G CK G + +A  +LD M  + C P+  TYN ++        
Sbjct: 135 MVEKGLVPSVPTYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKN 194

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+      L     P ++TY  LI   CK   +  A  +L+ M   G  PD  TY+ 
Sbjct: 195 VHRAMALLSKMLESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSV 254

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
            ++  CK+G+ ++A ++ N+L  +G++ N + Y  L+      G  D  + +LD M    
Sbjct: 255 FIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTED 314

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TYN LI+GLCK   V  A+     M+ K  +  + TY  ++ A+ KEG  + A 
Sbjct: 315 CLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAH 374

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++L  +  S   P +  Y   I     +G +++A  +   M E G+ PD +T+  +I  +
Sbjct: 375 RILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAY 434

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD- 536
                +  A D+LK +   G    +  Y  +I  L K +            ++ +YK   
Sbjct: 435 GGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEE------------LTKKYKNVA 482

Query: 537 --DTVFSTIVKKVADDGMT---EEAYKLWQKLIE 565
             D++ +     VAD       E A +L++K++E
Sbjct: 483 LCDSIPNVFFADVADVWKMMKFETALELFEKMLE 516



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 121/500 (24%), Positives = 216/500 (43%), Gaps = 64/500 (12%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G +  A +++D+M   +  P+      LI G  R   + +A  +L  M
Sbjct: 146 TYNALIDGYCKEGMVEAAQEILDLMHSNSCNPNERTYNELICGFCRKKNVHRAMALLSKM 205

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + S   P  +TYN ++ G CK G + SA  LL+ M+ +G  PD  TY+  + T+   G+ 
Sbjct: 206 LESRLTPSVVTYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRI 265

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A   +     KG     + YT LI+  CK   +  A  +LD M  E C P+  TYN+L
Sbjct: 266 EEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNAL 325

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+ K  +A+L++ +++ +G++    TY  L+ ++   G +D   +ILD M  + +
Sbjct: 326 IDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGY 385

Query: 359 SPTVFTYNILINGLCK-----------------------------------YGLVDRAIN 383
            P V+ Y   I+  C                                     GL++ A +
Sbjct: 386 QPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFD 445

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGM-----------------------------LN 414
              +M    C P   TY+ ++  L KE +                               
Sbjct: 446 VLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFE 505

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            AL+L   +    CSP + TY  LI GL K G +  A  L+  M E G+SP +  + +L+
Sbjct: 506 TALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLL 565

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              C      +AV L+  + + G+     +  ++  GL +    + A  V   ++   Y 
Sbjct: 566 NCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYN 625

Query: 535 PDDTVFSTIVKKVADDGMTE 554
            D+  +  ++  +  +G+++
Sbjct: 626 DDEVAWKILIDGLLKNGLSD 645



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/439 (25%), Positives = 197/439 (44%), Gaps = 29/439 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G L  A +L+++M     +PD       I  L +  RIE+A+ +   +
Sbjct: 216 TYNSLIHGQCKIGYLDSAYRLLNLMNENGVVPDQWTYSVFIDTLCKKGRIEEANVLFNSL 275

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G   + + Y  ++ G CK G++  A +LLD M    C P+  TYN ++  +    K 
Sbjct: 276 KEKGIKANEVIYTALIDGYCKAGKMDDANSLLDRMLTEDCLPNSSTYNALIDGLCKERKV 335

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+   +  ++KG    + TYTILI  + K+     A  +LD M   G  PD+  Y + 
Sbjct: 336 QEALLLMESMIQKGLKCTVPTYTILIVAMLKEGDFDYAHRILDQMVSSGYQPDVYIYTAF 395

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C +G   +A  +++ +  RG+ P+++TY  ++ + G  G  +    +L  M +   
Sbjct: 396 IHAFCTRGNIKEAEDMMSMMFERGVMPDALTYTLVIDAYGGLGLLNPAFDVLKRMFDTGC 455

Query: 359 SPTVFTYNILINGLCKYGLVDR-----------------------------AINSFNQMV 389
            P+  TY+ LI  L K  L  +                             A+  F +M+
Sbjct: 456 DPSHHTYSCLIKHLLKEELTKKYKNVALCDSIPNVFFADVADVWKMMKFETALELFEKML 515

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
              C P+I TY  ++  LCK G L  A +L   +N    SP    YN+L++   + G   
Sbjct: 516 EHGCSPNINTYAKLIIGLCKVGRLGVAQKLFDHMNERGVSPSEAIYNSLLNCCCELGIYG 575

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A+ L G MME+G  P   +   L  G       E+A  +   + + G      A++++I
Sbjct: 576 DAVRLVGAMMEHGHLPLLESLNVLFCGLYEEGSKEKAKVVFSNLLQCGYNDDEVAWKILI 635

Query: 510 HGLCKSKKVDMAIQVLELM 528
            GL K+   D   ++L +M
Sbjct: 636 DGLLKNGLSDGCSELLGVM 654



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 103/426 (24%), Positives = 191/426 (44%), Gaps = 29/426 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T +  +   C +G++ +A+ L + +  +    +      LI G  +  +++ A+ +L
Sbjct: 248 DQWTYSVFIDTLCKKGRIEEANVLFNSLKEKGIKANEVIYTALIDGYCKAGKMDDANSLL 307

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+    +P++ TYN ++ GLCK  +++ A+ L++ M   G +  V TY  ++  M   
Sbjct: 308 DRMLTEDCLPNSSTYNALIDGLCKERKVQEALLLMESMIQKGLKCTVPTYTILIVAMLKE 367

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G F  A       +  G  P +  YT  I   C +  I  A +++  M   G  PD +TY
Sbjct: 368 GDFDYAHRILDQMVSSGYQPDVYIYTAFIHAFCTRGNIKEAEDMMSMMFERGVMPDALTY 427

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC------------- 342
             +++     G  + A  V+  +   G +P+  TY+ L+  L                  
Sbjct: 428 TLVIDAYGGLGLLNPAFDVLKRMFDTGCDPSHHTYSCLIKHLLKEELTKKYKNVALCDSI 487

Query: 343 ----------------WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
                           ++   ++ + M E   SP + TY  LI GLCK G +  A   F+
Sbjct: 488 PNVFFADVADVWKMMKFETALELFEKMLEHGCSPNINTYAKLIIGLCKVGRLGVAQKLFD 547

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M  +   P    YN++L   C+ G+  +A++L+  +      P L + N L  GL ++G
Sbjct: 548 HMNERGVSPSEAIYNSLLNCCCELGIYGDAVRLVGAMMEHGHLPLLESLNVLFCGLYEEG 607

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
             EKA V++  +++ G + D++  + LI G  +    +   +LL  +  RG ++    YR
Sbjct: 608 SKEKAKVVFSNLLQCGYNDDEVAWKILIDGLLKNGLSDGCSELLGVMEARGCQIHPQTYR 667

Query: 507 LVIHGL 512
           ++I GL
Sbjct: 668 MLIEGL 673


>gi|225447872|ref|XP_002269015.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Vitis vinifera]
          Length = 656

 Score =  214 bits (545), Expect = 9e-53,   Method: Compositional matrix adjust.
 Identities = 120/394 (30%), Positives = 205/394 (52%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GKL  A + I  M      P+      +I G      IE A ++L  M
Sbjct: 251 TFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAM 310

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G  PD+ TY  ++ G+CK G++  A  L D+M   G  P+ +TYNT++    + G  
Sbjct: 311 RVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDL 370

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A  +  + ++KG  P + TY +L+  +  +  +  A +++ +M  +G  PD +TYN L
Sbjct: 371 ERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNIL 430

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   + G    A  + N +LS+G+EP  +TY +L++ L  R      D + + + +   
Sbjct: 431 INGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGV 490

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP V  +N +++G C  G V+RA     +M  K+  PD VT+NT++   C+EG + EA  
Sbjct: 491 SPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARM 550

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +      P  I+YNTLI G  ++G ++ A  +  +M+  G +P  +T+  LI   C
Sbjct: 551 LLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLC 610

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           +  + + A +LLKE+  +G    +S Y  +I G+
Sbjct: 611 KNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGM 644



 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 127/450 (28%), Positives = 225/450 (50%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C   +  +A K   +M  +  +P    C +++   ++++R+E A  +   M         
Sbjct: 190 CELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAEMFRLRISSTV 249

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            T+N+MV  LCK G+++ A   +  M   G +P+V++YNTI+      G  + A      
Sbjct: 250 YTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDA 309

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
              KG  P   TY  LI  +CK+  +  A  + D M   G  P+ VTYN+L++  C +G 
Sbjct: 310 MRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGD 369

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            + A    + ++ +G+ P+  TYN L+H+L   G     D ++  M +    P   TYNI
Sbjct: 370 LERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNI 429

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING  + G   +A +  N+M+SK  +P  VTY +++  L +   + EA  L   +    
Sbjct: 430 LINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQG 489

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            SP +I +N ++DG    G +E+A +L  +M    + PD++T  TL+ G CR  +VEEA 
Sbjct: 490 VSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEAR 549

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            LL E+ +RG K  + +Y  +I G  +   +  A +V + M+S  + P    ++ ++K +
Sbjct: 550 MLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCL 609

Query: 548 ADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
             +   + A +L ++++   +    +T L+
Sbjct: 610 CKNQEGDLAEELLKEMVNKGISPDDSTYLS 639



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 120/408 (29%), Positives = 216/408 (52%), Gaps = 10/408 (2%)

Query: 152 FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD 211
           F+  +N+   L +  +++KA + +  M   G  P+ ++YN ++ G   RG I  A  +LD
Sbjct: 252 FNIMVNV---LCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILD 308

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
            M V G EPD  TY +++  M   G+ ++A G +   +  G  P  +TY  LI+  C + 
Sbjct: 309 AMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKG 368

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            + RA    D+M  +G  P + TYN LV+    +G+  +A  +I  +  +G+ P++ITYN
Sbjct: 369 DLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYN 428

Query: 332 TLLHSLGSRGCWDAVDKILDIMNE---ASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            L++  G   C +A  K  D+ NE       PT  TY  LI  L +   +  A + F ++
Sbjct: 429 ILIN--GYSRCGNA-KKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKI 485

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           + +   PD++ +N ++   C  G +  A  LL  ++  S  P  +T+NTL+ G  ++G +
Sbjct: 486 LDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKV 545

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E+A +L  +M   GI PD I++ TLI G+ R   +++A  +  E+   G       Y  +
Sbjct: 546 EEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTYNAL 605

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD-DGMTEE 555
           I  LCK+++ D+A ++L+ M++    PDD+ + ++++ + + D + E+
Sbjct: 606 IKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGNVDTLVED 653



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 192/380 (50%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           V  +I ++++V   C+  +   A      M   G  P + T N +L       + + A  
Sbjct: 176 VKSSIVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWV 235

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            + +  R      + T+ I++  +CK+  + +A E +  M   G  P++V+YN++++   
Sbjct: 236 LYAEMFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYS 295

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
            +G  + A  +++ +  +G+EP+S TY +L+  +   G  +    + D M E    P   
Sbjct: 296 SRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAV 355

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN LI+G C  G ++RA +  ++MV K   P + TYN ++ AL  EG + EA  ++  +
Sbjct: 356 TYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEM 415

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P  ITYN LI+G ++ G  +KA  L+ +M+  GI P  +T+ +LI+   R +++
Sbjct: 416 RKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRM 475

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA DL ++I  +G       +  ++ G C +  V+ A  +L+ M      PD+  F+T+
Sbjct: 476 KEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTL 535

Query: 544 VKKVADDGMTEEAYKLWQKL 563
           ++    +G  EEA  L  ++
Sbjct: 536 MQGRCREGKVEEARMLLDEM 555



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 100/358 (27%), Positives = 171/358 (47%), Gaps = 35/358 (9%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+  + SRG +  A +++D M  +   PD +   +LI G+ +  R+E+AS +   MV 
Sbjct: 288 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 347

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-------SVS----------------- 216
            G VP+ +TYN ++ G C +G +  A +  DEM       SVS                 
Sbjct: 348 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 407

Query: 217 -----------GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                      G  PD ITYN ++      G  K+A     + L KG  P  +TYT LI 
Sbjct: 408 ADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIY 467

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            + ++  +  A ++ + +  +G SPD++ +N++V+  C  G  + A +++  +  + + P
Sbjct: 468 VLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPP 527

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           + +T+NTL+      G  +    +LD M      P   +YN LI+G  + G +  A    
Sbjct: 528 DEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVR 587

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
           ++M+S    P ++TYN ++  LCK    + A +LL  +     SP   TY +LI+G+ 
Sbjct: 588 DEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMG 645



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 77/311 (24%), Positives = 144/311 (46%)

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           I + +L+   C+      A +    M  +G  P I T N +++   K  + + A ++   
Sbjct: 180 IVFDLLVRVCCELRRADEAFKCFYMMKEKGIVPKIETCNDMLSLFLKLNRMEMAWVLYAE 239

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +    +     T+N +++ L   G      + +  M      P V +YN +I+G    G 
Sbjct: 240 MFRLRISSTVYTFNIMVNVLCKEGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGN 299

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           ++ A    + M  K  +PD  TY +++  +CKEG L EA  L   +      P  +TYNT
Sbjct: 300 IEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNT 359

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LIDG   KG +E+A     +M++ GI P   T+  L+       ++ EA D++KE+ K+G
Sbjct: 360 LIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKG 419

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y ++I+G  +      A  +   M+S   +P    +++++  ++     +EA 
Sbjct: 420 IIPDAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEAD 479

Query: 558 KLWQKLIEWKV 568
            L++K+++  V
Sbjct: 480 DLFEKILDQGV 490



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/224 (29%), Positives = 112/224 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +   G    A  L + M  +   P      +LI  L R +R+++A  + 
Sbjct: 423 DAITYNILINGYSRCGNAKKAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 482

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + ++  G  PD I +N MV G C  G +  A  LL EM      PD +T+NT+++     
Sbjct: 483 EKILDQGVSPDVIMFNAMVDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 542

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK ++A     +  R+G  P  I+Y  LI    ++  I  A  V D+M   G +P ++TY
Sbjct: 543 GKVEEARMLLDEMKRRGIKPDHISYNTLISGYGRRGDIKDAFRVRDEMLSIGFNPTLLTY 602

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           N+L+   CK  + D A  ++  ++++G+ P+  TY +L+  +G+
Sbjct: 603 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 646



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 48/129 (37%), Positives = 63/129 (48%), Gaps = 2/129 (1%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLI 163
           L   D   V  DE T N ++Q  C  GK+ +A  L+D M RR   PD H   N LI G  
Sbjct: 517 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKRRGIKPD-HISYNTLISGYG 575

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           R   I+ A +V   M+  G  P  +TYN ++  LCK  +   A  LL EM   G  PD  
Sbjct: 576 RRGDIKDAFRVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDS 635

Query: 224 TYNTILRTM 232
           TY +++  M
Sbjct: 636 TYLSLIEGM 644


>gi|359487666|ref|XP_002277942.2| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Vitis vinifera]
          Length = 609

 Score =  214 bits (545), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/398 (29%), Positives = 211/398 (53%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  ++  L++  RI     V + M+      + +T+++++ GLCK G+ + A  ++++M 
Sbjct: 197 CNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMK 256

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G  P VITYNTI+      GK  +A    K+ + K   P  IT+ ILI+  C+   + 
Sbjct: 257 AWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVT 316

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A +V ++M  +G  P++VTYNSL+N  C  GK D+A+ + + +   G++PN +TYN L+
Sbjct: 317 AAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALI 376

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           +    +       ++LD + +   +P V T+N LI+   K G +D A    + M+     
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P++ TYN ++   C+EG + EA +L   + G+     L+TYN L+D L KKG   KA+ L
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             +M E G++P  +T+  LI G+ R      A+++   + K+G +     Y ++I G C 
Sbjct: 497 LDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCN 556

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
             K++ A ++L  M+     P+ T +  +  ++ + G 
Sbjct: 557 KGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGF 594



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 194/376 (51%)

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           S G  ++I  +M+V    K G++  A+   D     G     ++ N +L ++   G+   
Sbjct: 153 SWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGV 212

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               +K+ +R+     ++T+ ++I  +CK     +A +V++DM   G SP ++TYN++++
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK GK   A  ++  ++++ + PN IT+N L+          A  K+ + M      P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN LINGLC  G +D A+   ++M     +P++VTYN ++   CK+ ML EA ++L
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +     +P +IT+NTLID   K G M+ A +L   M++ G+ P+  T+  LI GFCR 
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             V+EA  L KE+   G K     Y +++  LCK  +   A+++L+ M      P    +
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTY 512

Query: 541 STIVKKVADDGMTEEA 556
           + ++     +G +  A
Sbjct: 513 NALIDGYFREGNSTAA 528



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 178/351 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  GK   A  +++ M      P       +I G  +  ++ KA  +L+ MV   
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ IT+N+++ G C+   + +A  + +EM   G +P+V+TYN+++  +  NGK  +A+
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G        G  P ++TY  LI   CK+  +  A E+LDD+   G +P+++T+N+L++  
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K G+ DDA L+ + +L  G+ PN  TYN L+      G      K+   M        +
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADL 474

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYNIL++ LCK G   +A+   ++M      P  +TYN ++    +EG    AL +  L
Sbjct: 475 VTYNILVDALCKKGETRKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTL 534

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +        ++TYN LI G   KG +E+A  L  +M+E G+ P+  T+  L
Sbjct: 535 MEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 585



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 193/384 (50%)

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N M+  L K G+I    ++  EM       +V+T++ ++  +   GKF++A    +D   
Sbjct: 198 NPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKA 257

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P +ITY  +I+  CK   + +A  +L +M  +   P+ +T+N L++  C+      
Sbjct: 258 WGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTA 317

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  V   +  +G++PN +TYN+L++ L S G  D    + D M+     P V TYN LIN
Sbjct: 318 AKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALIN 377

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G CK  ++  A    + +  +   P+++T+NT++ A  K G +++A  L  ++  +   P
Sbjct: 378 GFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCP 437

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            + TYN LI G  ++G +++A  L  +M  NG+  D +T+  L+   C+  +  +AV LL
Sbjct: 438 NVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLL 497

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+ + G    +  Y  +I G  +      A+ V  LM     + +   ++ ++K   + 
Sbjct: 498 DEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKGFCNK 557

Query: 551 GMTEEAYKLWQKLIEWKVFEKGTT 574
           G  EEA +L  +++E  +    TT
Sbjct: 558 GKLEEANRLLNEMLEKGLIPNRTT 581



 Score =  152 bits (383), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 93/342 (27%), Positives = 160/342 (46%), Gaps = 2/342 (0%)

Query: 74  DQDEWSSESHVLAVNKKLRGLTITKK--SHDPSLPSSDGPFVENDEKTNNKILQNFCSRG 131
           D   W     V+  N  + G     K    D  L       +  +E T N ++  FC   
Sbjct: 254 DMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
            +T A K+ + M R+   P+     +LI GL    ++++A  +   M   G  P+ +TYN
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYN 373

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            ++ G CK+  ++ A  +LD++   G  P+VIT+NT++      G+   A       L  
Sbjct: 374 ALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P + TY  LI   C++  +  A ++  +M   G   D+VTYN LV+  CK+G+   A
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           V +++ +   G+ P+ +TYN L+      G   A   +  +M +      + TYN+LI G
Sbjct: 494 VRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVLIKG 553

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            C  G ++ A    N+M+ K   P+  TY+ +   + ++G +
Sbjct: 554 FCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 595



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/312 (25%), Positives = 159/312 (50%), Gaps = 1/312 (0%)

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           GC   +I   +L+    K   +  A+E  D     G     ++ N ++    K+G+    
Sbjct: 155 GCANSIIV-DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             V   ++ R +  N +T++ +++ L   G +     +++ M     SP+V TYN +I+G
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
            CK G + +A     +MV+K   P+ +T+N ++   C++  +  A ++   +      P 
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           ++TYN+LI+GL   G +++A+ L  +M   G+ P+ +T+  LI GFC+   ++EA ++L 
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           +IGKRG       +  +I    K+ ++D A  +  +M+ +   P+ + ++ ++     +G
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREG 453

Query: 552 MTEEAYKLWQKL 563
             +EA KL +++
Sbjct: 454 NVKEARKLAKEM 465



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 63/229 (27%), Positives = 118/229 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC +  L +A +++D + +R   P+      LI    +  R++ A  +  +M
Sbjct: 371 TYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMM 430

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G  P+  TYN ++ G C+ G ++ A  L  EM  +G + D++TYN ++  +   G+ 
Sbjct: 431 LDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGET 490

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+    +    G  P  +TY  LI+   ++     A+ V   M  +G   +IVTYN L
Sbjct: 491 RKAVRLLDEMFEVGLNPSHLTYNALIDGYFREGNSTAALNVRTLMEKKGRRANIVTYNVL 550

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           +   C +GK ++A  ++N +L +G+ PN  TY+ L   +  +G    +D
Sbjct: 551 IKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDID 599



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 137/282 (48%), Gaps = 1/282 (0%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GC+  I+  + LV    K G+ D A+   +     G   ++++ N +L SL   G    V
Sbjct: 155 GCANSIIV-DMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGVV 213

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           + +   M        V T++++INGLCK G   +A +    M +    P ++TYNT++  
Sbjct: 214 ESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDG 273

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK G + +A  LL  +      P  IT+N LIDG  +   +  A  ++ +M   G+ P+
Sbjct: 274 YCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPN 333

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+ +LI G C   +++EA+ L  ++   G K     Y  +I+G CK K +  A ++L+
Sbjct: 334 VVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLD 393

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            +      P+   F+T++      G  ++A+ L   +++  V
Sbjct: 394 DIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGV 435



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 21/250 (8%)

Query: 331 NTLLHSLGSRGCWDAVDKIL---------------------DIMNEASHSPTVFTYNILI 369
           +T+ HSL   G W   + I+                     D   +     +  + N ++
Sbjct: 142 STIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPML 201

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
             L K G +    + + +M+ +    ++VT++ V+  LCK G   +A  ++  +     S
Sbjct: 202 VSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFS 261

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P +ITYNT+IDG  K G M KA  L  +M+   I P++IT   LI GFCR + V  A  +
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            +E+ ++G +     Y  +I+GLC + K+D A+ + + M     KP+   ++ ++     
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 550 DGMTEEAYKL 559
             M +EA ++
Sbjct: 382 KKMLKEAREM 391


>gi|119638441|gb|ABL85032.1| auxin efflux carrier [Brachypodium sylvaticum]
          Length = 895

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 232/470 (49%), Gaps = 35/470 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +   G + +A++++ +MA     P    C  L++ L+R D +E   K+   M  +G
Sbjct: 179 LVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELLWKLKGFMEGAG 238

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD  TY+  +   CK     +A  + +EM    C  + +TYN ++  +  +G  ++A 
Sbjct: 239 ILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 298

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           GF ++ +  G  P   TY  L+  +CK   +  A  +LD+M+  G  P+IV Y +LV+  
Sbjct: 299 GFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGF 358

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL------------ 350
            K+GK  +A  ++  ++S G++PN I Y+ L+  L   G      K+L            
Sbjct: 359 MKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDT 418

Query: 351 --------------------DIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQ 387
                               +++NE  +S   P V++Y I+INGLC+ G    A N   +
Sbjct: 419 FTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEE 478

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M+S+  +P+   Y  ++    KEG ++ A + L  +  ++  P L  YN+LI GL+  G 
Sbjct: 479 MISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGR 538

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           ME+A   Y Q+ + G+ PD+ T+  LI G+C+   +E+A  LL+++   G K     Y  
Sbjct: 539 MEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTD 598

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           ++ G  KS   +    +L+ M+ S  KPD+ ++  +++ ++     E A+
Sbjct: 599 LLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 648



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 131/445 (29%), Positives = 220/445 (49%), Gaps = 5/445 (1%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDR 167
           +G  +  D  T +  ++  C       A K+ + M RR+  + +  + + +I GL R   
Sbjct: 235 EGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNV-MISGLCRSGA 293

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +E+A    + MV  G  PD  TY  ++ GLCK  +++ A ALLDEMS SG +P+++ Y T
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++      GK  +A    K+ +  G  P  I Y  LI  +CK   + RA ++L +M   G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD  TYN L+    +Q   D A  ++N + + G+ PN  +Y  +++ L   G      
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            +L+ M      P  F Y  LI G  K G +  A  +  +M   N  PD+  YN+++  L
Sbjct: 474 NLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGL 533

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
              G + EA +    +      P   TY+ LI G  K G +EKA  L  QM+ +G+ P+ 
Sbjct: 534 STVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNA 593

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T+  L+ G+ +++  E+   +L+ +   G+K  N  Y +VI  L +S+ +++A  VL  
Sbjct: 594 DTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 653

Query: 528 MISSRYKPDDTVFSTIVK---KVAD 549
           +  +   PD  ++S+++    K+AD
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIAD 678



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 135/521 (25%), Positives = 227/521 (43%), Gaps = 71/521 (13%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   GK  +A  ++  M      P+     NLIRGL +I ++ +ASK+L+ M+  G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PDT TYN ++ G  ++     A  LL+EM  SG  P+V +Y  ++  +  NG+ K+A 
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV--- 299
              ++ + +G  P    Y  LI    K+  I+ A E L+ M      PD+  YNSL+   
Sbjct: 474 NLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGL 533

Query: 300 ------------------------NFS--------CKQGKYDDAVLVINNLLSRGMEPNS 327
                                    F+        CK G  + A  ++  +L+ G++PN+
Sbjct: 534 STVGRMEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNA 593

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI-------------------- 367
            TY  LL        ++ V  IL  M  +   P    Y I                    
Sbjct: 594 DTYTDLLEGYFKSNDYEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 653

Query: 368 ---------------LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
                          LI+GLCK   +++A+   ++M  +  +P IV YN ++   C+ G 
Sbjct: 654 VEKNGLVPDLHIYSSLISGLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 713

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ A  +   +      P  +TY  LIDG  K G +  A  LY +M++ GI+PD   +  
Sbjct: 714 ISRARNVFDSILAKGLVPNCVTYTALIDGNCKNGDITDAFDLYKEMLDRGIAPDAFVYNV 773

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L  G   A  +E+A+ L +E+  RG     S +  ++HG CK  K+    ++L +M+   
Sbjct: 774 LATGCSDAADLEQALFLTEEMFNRGYA-NVSLFNTLVHGFCKRGKLQETEKLLHVMMDRE 832

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
             P+      +V +    G   EA++++ +L + K  +  T
Sbjct: 833 IVPNAQTVEKVVSEFGKAGKLGEAHRVFAELQQKKASQSAT 873



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 115/450 (25%), Positives = 213/450 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C   +L +A  L+D M+     P+      L+ G ++  +  +A  +L
Sbjct: 312 DAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDIL 371

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+ +G  P+ I Y+ ++ GLCK GQ+  A  LL EM   G  PD  TYN +++  F  
Sbjct: 372 KEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQ 431

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A     +    G  P + +Y I+I  +C+      A  +L++M  EG  P+   Y
Sbjct: 432 HDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMY 491

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+    K+G    A   +  +    + P+   YN+L+  L + G  +  ++    + +
Sbjct: 492 APLIIGHSKEGNISLACEALEKMTKANVHPDLFCYNSLIKGLSTVGRMEEAEEYYAQVQK 551

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P  FTY+ LI+G CK G +++A     QM++   +P+  TY  +L    K     +
Sbjct: 552 RGLVPDEFTYSGLIHGYCKTGNLEKADQLLRQMLNSGLKPNADTYTDLLEGYFKSNDYEK 611

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
              +L  + GS   P    Y  +I  L++   ME A ++  ++ +NG+ PD   + +LI 
Sbjct: 612 VSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS 671

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+   +E+AV LL E+ K G +     Y  +I G C+S  +  A  V + +++    P
Sbjct: 672 GLCKIADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLVP 731

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +   ++ ++     +G   +A+ L++++++
Sbjct: 732 NCVTYTALIDGNCKNGDITDAFDLYKEMLD 761



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 139/286 (48%)

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G  PD+ TY++ +   CK   +D A  V   +  R    N +TYN ++  L   G 
Sbjct: 234 MEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGA 293

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            +      + M +   SP  FTY  L+NGLCK   +  A    ++M     +P+IV Y T
Sbjct: 294 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPNIVVYGT 353

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++    KEG   EA  +L  +  +   P  I Y+ LI GL K G + +A  L  +M++ G
Sbjct: 354 LVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLKEMIKVG 413

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + PD  T+  L+ G  +    + A +LL E+   G      +Y ++I+GLC++ +   A 
Sbjct: 414 LRPDTFTYNPLMQGHFQQHDKDGAFELLNEMRNSGILPNVYSYGIMINGLCQNGESKEAG 473

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            +LE MIS   KP+  +++ ++   + +G    A +  +K+ +  V
Sbjct: 474 NLLEEMISEGLKPNAFMYAPLIIGHSKEGNISLACEALEKMTKANV 519



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 81/291 (27%), Positives = 137/291 (47%), Gaps = 1/291 (0%)

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           I RAI+  D  +    SP     + LV+   K G   +A  V+  +   G+ P     N 
Sbjct: 155 IQRAIQDTDHRS-RSPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNG 213

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           LL  L      + + K+   M  A   P V+TY+  I   CK    D A   F +M  ++
Sbjct: 214 LLKDLLRADAMELLWKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRD 273

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C  + VTYN ++  LC+ G + EA      +     SP   TY  L++GL K   +++A 
Sbjct: 274 CAMNEVTYNVMISGLCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAK 333

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  +M  +G+ P+ + + TL+ GF +  +  EA D+LKE+   G +     Y  +I GL
Sbjct: 334 ALLDEMSCSGLKPNIVVYGTLVDGFMKEGKTAEAFDILKEMISAGVQPNKIMYDNLIRGL 393

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           CK  ++  A ++L+ MI    +PD   ++ +++        + A++L  ++
Sbjct: 394 CKIGQLGRASKLLKEMIKVGLRPDTFTYNPLMQGHFQQHDKDGAFELLNEM 444



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 97/212 (45%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           S SP+    ++L++   K G V  A      M      P     N +L  L +   +   
Sbjct: 168 SPSPSTAVLDVLVDTYKKTGSVRNAAQVVLMMADLGLAPTRRCCNGLLKDLLRADAMELL 227

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +L   + G+   P + TY+T I+   K    + A  ++ +M     + +++T+  +I G
Sbjct: 228 WKLKGFMEGAGILPDVYTYSTFIEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISG 287

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            CR+  VEEA    +E+   G       Y  +++GLCK  ++  A  +L+ M  S  KP+
Sbjct: 288 LCRSGAVEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGSRLKEAKALLDEMSCSGLKPN 347

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             V+ T+V     +G T EA+ + +++I   V
Sbjct: 348 IVVYGTLVDGFMKEGKTAEAFDILKEMISAGV 379


>gi|297835244|ref|XP_002885504.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331344|gb|EFH61763.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 618

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 232/453 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E++  T N ++  FC + KL  A  ++    +    P+      LI G     R+ +A 
Sbjct: 100 IEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAV 159

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV     P+ +T N ++ GLC +G++  A+ L+D M   GCE + ITY  +L  M
Sbjct: 160 ALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRM 219

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G    A+  ++    +     ++ Y+I+I+ +CK   +  A+ + ++M ++G   D+
Sbjct: 220 CKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADV 279

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V Y+S++   C  G++DD   ++  ++ R + PN +T++ L+      G      ++ + 
Sbjct: 280 VAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNE 339

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M     +P   TY+ LI+G CK   +  A    + MVSK C+P+IVTY+ ++ + CK   
Sbjct: 340 MVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKR 399

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++  ++L   ++        +TYNTL+ G  + G +  A  L+ +M+  G+ P  +T+  
Sbjct: 400 VDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGI 459

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C   ++++A+++ +++ K    +    Y ++IHG+C + KVD A  +   +    
Sbjct: 460 LLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCSLSVKG 519

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KPD   ++ ++  +   G   EA  L++K+ E
Sbjct: 520 VKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKE 552



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 199/397 (50%), Gaps = 2/397 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKAS 172
           E +E T   +L   C  G    A  L   M  R+ +     + I +I  L +   ++ A 
Sbjct: 206 EANEITYGPVLNRMCKSGNTALALDLFRKMEERSIKASVVQYSI-VIDSLCKDGNLDDAL 264

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M M G   D + Y+ ++GGLC  G+      +L EM      P+V+T++ ++   
Sbjct: 265 SLFNEMEMKGIKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVF 324

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK  +A   + + + +G  P  ITY+ LI+  CK+  +  A ++LD M  +GC P+I
Sbjct: 325 VKEGKLLEAKELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNI 384

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY+ L+N  CK  + D+ + +   + S+G+  +++TYNTL+      G  +   ++   
Sbjct: 385 VTYSILINSYCKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQE 444

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P+V TY IL++GLC  G + +A+  F +M        I  YN ++  +C    
Sbjct: 445 MVSRGVPPSVVTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASK 504

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +++A  L   L+     P ++TYN +I GL KKG + +A +L+ +M E+G +P D T+  
Sbjct: 505 VDDAWSLFCSLSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNI 564

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           LI        V  +V+L++E+  RG     S  ++V+
Sbjct: 565 LIRAHLGGSGVISSVELIEEMKMRGFAADASTIKMVV 601



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/438 (25%), Positives = 215/438 (49%), Gaps = 36/438 (8%)

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
           G++ I ++ +A  + + M+ S  +P  I ++ +   + +R +    +    EM ++G E 
Sbjct: 44  GIVDI-KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEH 102

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           ++ T N ++       K   A       L+ G  P  IT++ LI   C +  ++ A+ ++
Sbjct: 103 NMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALV 162

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           D M      P++VT N+L+N  C +G+  +A+++I+ ++  G E N ITY  +L+ +   
Sbjct: 163 DRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKS 222

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G       +   M E S   +V  Y+I+I+ LCK G +D A++ FN+M  K  + D+V Y
Sbjct: 223 GNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAY 282

Query: 401 NTVLGALC-----------------------------------KEGMLNEALQLLHLLNG 425
           ++++G LC                                   KEG L EA +L + +  
Sbjct: 283 SSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAKELYNEMVA 342

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
              +P  ITY++LIDG  K+  + +A  +   M+  G  P+ +T+  LI  +C+A +V+ 
Sbjct: 343 RGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSYCKAKRVDN 402

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
            + L  EI  +G       Y  ++ G C+S K+++A ++ + M+S    P    +  ++ 
Sbjct: 403 GMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSVVTYGILLD 462

Query: 546 KVADDGMTEEAYKLWQKL 563
            + D+G  ++A ++++K+
Sbjct: 463 GLCDNGELQKALEIFEKM 480



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/370 (26%), Positives = 166/370 (44%), Gaps = 40/370 (10%)

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           ++Y   LR    + K  +AI  ++  ++    P LI ++ L   V ++      +    +
Sbjct: 35  VSYKERLRNGIVDIKVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKE 94

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M + G   ++ T N ++N  C++ K   A  V+   L  G EPN+IT++TL++     G 
Sbjct: 95  MDLNGIEHNMYTMNIMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGR 154

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                 ++D M E  + P V T N LINGLC  G V  A+   ++MV   C+ + +TY  
Sbjct: 155 VSEAVALVDRMVEMKYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGP 214

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           VL  +CK G    AL L   +   S    ++ Y+ +ID L K G ++ A+ L+ +M   G
Sbjct: 215 VLNRMCKSGNTALALDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKG 274

Query: 463 ISPDDITHRTLIWGFC-----------------------------------RADQVEEAV 487
           I  D + + ++I G C                                   +  ++ EA 
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV--- 544
           +L  E+  RG       Y  +I G CK  ++  A Q+L+LM+S   +P+   +S ++   
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSY 394

Query: 545 --KKVADDGM 552
              K  D+GM
Sbjct: 395 CKAKRVDNGM 404



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 140/294 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    + I+   C+ G+  D +K++  M  RN IP+      LI   ++  ++ +A 
Sbjct: 275 IKADVVAYSSIIGGLCNDGRWDDGAKMLREMIGRNIIPNVVTFSALIDVFVKEGKLLEAK 334

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   MV  G  PDTITY+ ++ G CK  ++  A  +LD M   GCEP+++TY+ ++ + 
Sbjct: 335 ELYNEMVARGIAPDTITYSSLIDGFCKENRLGEANQMLDLMVSKGCEPNIVTYSILINSY 394

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +    +  + +   KG     +TY  L++  C+   +  A E+  +M   G  P +
Sbjct: 395 CKAKRVDNGMRLFCEISSKGLVADTVTYNTLVQGFCQSGKLNVAKELFQEMVSRGVPPSV 454

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  L++  C  G+   A+ +   +    M      YN ++H + +    D    +   
Sbjct: 455 VTYGILLDGLCDNGELQKALEIFEKMQKSRMILGIGIYNIIIHGMCNASKVDDAWSLFCS 514

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           ++     P V TYN++I GLCK G +  A   F +M    C P   TYN ++ A
Sbjct: 515 LSVKGVKPDVLTYNVMIGGLCKKGSLSEADMLFRKMKEDGCAPSDCTYNILIRA 568



 Score =  108 bits (270), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 138/271 (50%)

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K ++A+ +  +++     P+ I ++ L  ++  R  +D V      M+       ++T N
Sbjct: 49  KVNEAIDLFESMIQSRPLPSLIDFSKLFSAVARRKEYDLVLGFCKEMDLNGIEHNMYTMN 108

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           I+IN  C+   +  A +   + +    +P+ +T++T++   C EG ++EA+ L+  +   
Sbjct: 109 IMINCFCRKRKLLFAFSVVGRALKFGFEPNTITFSTLINGFCLEGRVSEAVALVDRMVEM 168

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P ++T NTLI+GL  KG + +A+VL  +M++ G   ++IT+  ++   C++     A
Sbjct: 169 KYRPNVVTVNTLINGLCLKGRVTEALVLIDRMVKYGCEANEITYGPVLNRMCKSGNTALA 228

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           +DL +++ +R  K     Y +VI  LCK   +D A+ +   M     K D   +S+I+  
Sbjct: 229 LDLFRKMEERSIKASVVQYSIVIDSLCKDGNLDDALSLFNEMEMKGIKADVVAYSSIIGG 288

Query: 547 VADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           + +DG  ++  K+ +++I   +     T  A
Sbjct: 289 LCNDGRWDDGAKMLREMIGRNIIPNVVTFSA 319


>gi|449523421|ref|XP_004168722.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Cucumis sativus]
          Length = 628

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 128/468 (27%), Positives = 224/468 (47%), Gaps = 35/468 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++++ C   +  +A +    M  +  +P    C +L+   ++++R E A  +   M    
Sbjct: 157 LIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAEMFRLR 216

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
                 T+N+M+  LCK G+++ A   +  M  SG +P+++TYNTI+     +G+ + A 
Sbjct: 217 IKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAAD 276

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                  R+   P   TY  LI  +CKQ  +  A ++ ++M  +G  P  V YN+L++  
Sbjct: 277 AILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGF 336

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +G  D A    + +L +G+ P   TYN+L+H+L      D  + ++  + E   SP  
Sbjct: 337 CNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDA 396

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYNILING C+     +A    ++M++   +P   TY ++L  L K+  + EA  L   
Sbjct: 397 ITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKK 456

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  I +N LIDG      ++ A  L   M    + PD++T  T++ G CR  +
Sbjct: 457 ITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGK 516

Query: 483 VEEAVDLLKEIGKRGNK------------------------MRNS-----------AYRL 507
           VEEA +L  E+ +RG K                        +RN             Y  
Sbjct: 517 VEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNA 576

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           ++ GLCK+++ D+A ++L+ M+S    PDDT + T+++ +A   + +E
Sbjct: 577 LVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDE 624



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 111/396 (28%), Positives = 190/396 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GKL  A   +  M      P+      ++ G     R+E A  +L  M
Sbjct: 223 TFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGRVEAADAILTTM 282

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 PD+ TY  ++ G+CK+G++  A  + +EM   G  P  + YNT++    + G  
Sbjct: 283 KRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIYNTLIDGFCNKGNL 342

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  +  + L+KG  P + TY  LI  +  +     A  ++ ++  +G SPD +TYN L
Sbjct: 343 DMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQEKGISPDAITYNIL 402

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C+      A L+ + +L+ G++P   TY +LLH L  +      D +   +     
Sbjct: 403 INGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKEADDLFKKITSEGV 462

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    +N LI+G C    V  A      M      PD VT+NT++   C+EG + EA +
Sbjct: 463 LPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQGHCREGKVEEARE 522

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P  I++NTLI G +++G ++ A  +  +M++ G +P  +T+  L+ G C
Sbjct: 523 LFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNPTVLTYNALVQGLC 582

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +  + + A +LLKE+  +G    ++ Y  +I G+ K
Sbjct: 583 KNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAK 618



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 108/367 (29%), Positives = 189/367 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+  +CS G++  A  ++  M R+   PD     +LI G+ +  R+E+ASK+ + M
Sbjct: 258 TYNTIVHGYCSSGRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEM 317

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P  + YN ++ G C +G +  A A  DEM   G  P + TYN+++  +F   + 
Sbjct: 318 VQKGLRPSAVIYNTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRT 377

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A    K+   KG  P  ITY ILI   C+     +A  + D+M   G  P   TY SL
Sbjct: 378 DEAECMIKEIQEKGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSL 437

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+ +  +A  +   + S G+ P++I +N L+    S        ++L  M+    
Sbjct: 438 LHVLSKKNRMKEADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKV 497

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   T+N ++ G C+ G V+ A   F++M  +  +PD +++NT++    + G + +A +
Sbjct: 498 PPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFR 557

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           + + +  +  +P ++TYN L+ GL K    + A  L  +M+  G++PDD T+ TLI G  
Sbjct: 558 VRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIA 617

Query: 479 RADQVEE 485
           + +  +E
Sbjct: 618 KVNIPDE 624



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/438 (26%), Positives = 215/438 (49%), Gaps = 9/438 (2%)

Query: 132 KLTDASKL---IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG---GVP 185
           KL+DA  L   I I+AR   +P     ++L+R  +         ++ + +  S    G  
Sbjct: 93  KLSDARTLCLAIVIVAR---LPSPKPALHLLRQALGGGTTNSIREIFEFLAASRDRLGFK 149

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
            +I ++ ++   C   +   A      M   G  P + T N++L       + + A   +
Sbjct: 150 SSIVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLY 209

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            +  R      + T+ I+I  +CK+  + +A + +  M   G  P+IVTYN++V+  C  
Sbjct: 210 AEMFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSS 269

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G+ + A  ++  +  + +EP+S TY +L+  +  +G  +   KI + M +    P+   Y
Sbjct: 270 GRVEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQKGLRPSAVIY 329

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N LI+G C  G +D A    ++M+ K   P + TYN+++ AL  E   +EA  ++  +  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
              SP  ITYN LI+G  +    +KA +L+ +M+ +GI P   T+ +L+    + ++++E
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A DL K+I   G       +  +I G C +  V  A ++L+ M   +  PD+  F+TI++
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 546 KVADDGMTEEAYKLWQKL 563
               +G  EEA +L+ ++
Sbjct: 510 GHCREGKVEEARELFDEM 527



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/299 (27%), Positives = 131/299 (43%), Gaps = 35/299 (11%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC++G L  AS   D M ++   P      +LI  L    R ++A  +++ +  
Sbjct: 330 NTLIDGFCNKGNLDMASAYKDEMLKKGISPTMSTYNSLIHALFMEQRTDEAECMIKEIQE 389

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT--------- 231
            G  PD ITYN+++ G C+    + A  L DEM  SG +P   TY ++L           
Sbjct: 390 KGISPDAITYNILINGYCRCANAKKAFLLHDEMLASGIKPTKKTYTSLLHVLSKKNRMKE 449

Query: 232 ------------------MFD--------NGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                             MF+        N   K A    KD  R   PP  +T+  +++
Sbjct: 450 ADDLFKKITSEGVLPDAIMFNALIDGHCSNSNVKGAFELLKDMDRMKVPPDEVTFNTIMQ 509

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             C++  +  A E+ D+M   G  PD +++N+L++   ++G   DA  V N +L  G  P
Sbjct: 510 GHCREGKVEEARELFDEMKRRGIKPDHISFNTLISGYSRRGDIKDAFRVRNEMLDTGFNP 569

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
             +TYN L+  L      D  +++L  M     +P   TY  LI G+ K  + D   N+
Sbjct: 570 TVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIEGIAKVNIPDENKNT 628



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 49/119 (41%), Positives = 62/119 (52%), Gaps = 2/119 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           V  DE T N I+Q  C  GK+ +A +L D M RR   PD H   N LI G  R   I+ A
Sbjct: 497 VPPDEVTFNTIMQGHCREGKVEEARELFDEMKRRGIKPD-HISFNTLISGYSRRGDIKDA 555

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
            +V   M+ +G  P  +TYN +V GLCK  +   A  LL EM   G  PD  TY T++ 
Sbjct: 556 FRVRNEMLDTGFNPTVLTYNALVQGLCKNQEGDLAEELLKEMVSKGMTPDDTTYFTLIE 614



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 38/168 (22%), Positives = 79/168 (47%)

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           + ++ ++ + C     +EA +  + +      P + T N+L+    K    E A VLY +
Sbjct: 152 IVFDYLIKSCCDMNRADEAFECFYTMKEKGVLPTIETCNSLLSLFLKLNRTEAAWVLYAE 211

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M    I     T   +I   C+  ++++A D +  +   G K     Y  ++HG C S +
Sbjct: 212 MFRLRIKSSVYTFNIMINVLCKEGKLKKAKDFVGHMETSGVKPNIVTYNTIVHGYCSSGR 271

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           V+ A  +L  M   + +PD   + +++  +   G  EEA K+++++++
Sbjct: 272 VEAADAILTTMKRQKIEPDSFTYGSLISGMCKQGRLEEASKIFEEMVQ 319


>gi|413949109|gb|AFW81758.1| hypothetical protein ZEAMMB73_033635 [Zea mays]
          Length = 691

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 119/396 (30%), Positives = 201/396 (50%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +  A +    M+  G  P+  TYN+++  LC RG  + A+++L +M  +GC P+V+TYNT
Sbjct: 131 LTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVVTYNT 190

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++   F  G+   A       L  G  P L+T+  ++  +CK   +  A +V D+M  EG
Sbjct: 191 LVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEMMREG 250

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
            +PD V+YN+LV   CK G   +A+ V   +  +G+ P+ +T+ +L+H +   G  +   
Sbjct: 251 LAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNLEWAV 310

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            ++  M E        T+  LI+G CK G +D A+ +   M     +P +V YN ++   
Sbjct: 311 TLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGMRQCRIKPSVVCYNALINGY 370

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C  G ++EA +LLH +      P ++TY+T+I    K      A  L  QM+E G+ PD 
Sbjct: 371 CMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDA 430

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           IT+ +LI   C   ++ +A  L K + K G +     Y  +I G CK   V+ A+ + + 
Sbjct: 431 ITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDK 490

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M+ +   PD   +S ++  ++      EA +L  KL
Sbjct: 491 MVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKL 526



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 131/454 (28%), Positives = 227/454 (50%), Gaps = 19/454 (4%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           S   LT A +  D M      P+ +    LIR L      ++A  +L+ M  +G  P+ +
Sbjct: 127 SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEALSILRDMRGAGCGPNVV 186

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TYN +V    + G++  A  L+  M   G +P+++T+N+++  M   GK + A   + + 
Sbjct: 187 TYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 246

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +R+G  P  ++Y  L+   CK      A+ V  +M  +G  PD+VT+ SL++  CK G  
Sbjct: 247 MREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL 306

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI--MNEASHSPTVFTYN 366
           + AV ++  +  RG++ N +T+  L+     +G  D  D +L +  M +    P+V  YN
Sbjct: 307 EWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD--DALLAVRGMRQCRIKPSVVCYN 364

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LING C  G +D A    ++M +K  +PD+VTY+T++ A CK    + A +L   +   
Sbjct: 365 ALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK 424

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P  ITY++LI  L ++  +  A VL+  M++ G+ PD+ T+ +LI G C+   VE A
Sbjct: 425 GVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERA 484

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS----- 541
           + L  ++ K G       Y ++I+GL KS +   A Q+L  +      P +T +      
Sbjct: 485 LSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHC 544

Query: 542 ----------TIVKKVADDGMTEEAYKLWQKLIE 565
                      ++K     G+  EA K++Q +++
Sbjct: 545 CRKAELKSVLALLKGFCMKGLMNEADKVYQSMLD 578



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 144/536 (26%), Positives = 255/536 (47%), Gaps = 59/536 (11%)

Query: 84  VLAVNKKL-----RGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           VLA N  L       LT  ++  D  L  SDG  V  +  T N +++  C RG   +A  
Sbjct: 116 VLAYNAVLLALSDASLTSARRFFDSML--SDG--VAPNVYTYNILIRALCGRGHRKEALS 171

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           ++  M      P+      L+    R   ++ A +++ +M+  G  P+ +T+N MV G+C
Sbjct: 172 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNGMC 231

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K G++  A  + DEM   G  PD ++YNT++      G   +A+  + +  +KG  P ++
Sbjct: 232 KAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 291

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T+T LI  +CK   +  A+ ++  M   G   + VT+ +L++  CK+G  DDA+L +  +
Sbjct: 292 TFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 351

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
               ++P+ + YN L++     G  D   ++L  M      P V TY+ +I+  CK    
Sbjct: 352 RQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 411

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A     QM+ K   PD +TY++++  LC+E  L++A  L   +      P   TY +L
Sbjct: 412 HSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 471

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF--------------------- 477
           IDG  K+G +E+A+ L+ +M++ G+ PD +T+  LI G                      
Sbjct: 472 IDGHCKEGNVERALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEEP 531

Query: 478 -------------CRADQVEEAVDLLKEIGKRG-----NKM------RN-----SAYRLV 508
                        CR  +++  + LLK    +G     +K+      RN     S Y ++
Sbjct: 532 IPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVL 591

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           IHG C++  V  A+   + M+   + P+ T   ++++ + ++GM  EA ++ Q+L+
Sbjct: 592 IHGHCRAGNVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLL 647



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 180/349 (51%), Gaps = 1/349 (0%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P V+ YN +L  + D      A  F+   L  G  P + TY ILI  +C +     A
Sbjct: 111 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + +L DM   GC P++VTYN+LV    + G+ D A  ++  +L  G++PN +T+N++++ 
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           +   G  +   K+ D M     +P   +YN L+ G CK G    A++ F +M  K   PD
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +VT+ +++  +CK G L  A+ L+  +         +T+  LIDG  KKG ++ A++   
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 349

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M +  I P  + +  LI G+C   +++EA +LL E+  +G K     Y  +I   CK+ 
Sbjct: 350 GMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 409

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               A ++ + M+     PD   +S++++ + ++    +A+ L++ +I+
Sbjct: 410 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCEEKRLSDAHVLFKNMIK 458



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 96/325 (29%), Positives = 173/325 (53%), Gaps = 5/325 (1%)

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P ++ Y  ++  +     +  A    D M  +G +P++ TYN L+   C +G   +A
Sbjct: 111 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILIRALCGRGHRKEA 169

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + ++ ++   G  PN +TYNTL+ +    G  D  ++++ +M +    P + T+N ++NG
Sbjct: 170 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMLDGGLKPNLVTFNSMVNG 229

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           +CK G ++ A   F++M+ +   PD V+YNT++G  CK G  +EAL +   +      P 
Sbjct: 230 MCKAGKMEDARKVFDEMMREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 289

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           ++T+ +LI  + K G +E A+ L  QM E G+  +++T   LI GFC+   +++A  LL 
Sbjct: 290 VVTFTSLIHVMCKAGNLEWAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA--LLA 347

Query: 492 EIGKRGNKMRNSA--YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             G R  +++ S   Y  +I+G C   ++D A ++L  M +   KPD   +STI+     
Sbjct: 348 VRGMRQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 407

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTT 574
           +  T  A++L Q+++E  V     T
Sbjct: 408 NCDTHSAFELNQQMLEKGVLPDAIT 432



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 101/386 (26%), Positives = 175/386 (45%), Gaps = 22/386 (5%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           ++ +E T   ++  FC +G L DA   +  M R+ +I     C N LI G   + R+++A
Sbjct: 321 LQMNEVTFTALIDGFCKKGFLDDALLAVRGM-RQCRIKPSVVCYNALINGYCMVGRMDEA 379

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            ++L  M   G  PD +TY+ ++   CK     SA  L  +M   G  PD ITY++++R 
Sbjct: 380 RELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRV 439

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           + +  +   A   +K+ ++ G  P   TYT LI+  CK+  + RA+ + D M   G  PD
Sbjct: 440 LCEEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVERALSLHDKMVKAGVLPD 499

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VTY+ L+N   K  +  +A  ++  L      P +  Y+ L+H      C  A  K   
Sbjct: 500 VVTYSVLINGLSKSARAMEAQQLLFKLYHEEPIPANTKYDALMHC-----CRKAELK--- 551

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
                       +   L+ G C  GL++ A   +  M+ +N   D   Y+ ++   C+ G
Sbjct: 552 ------------SVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVLIHGHCRAG 599

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            + +AL     +     +P   +  +LI GL + G + +A  +  Q++      D    +
Sbjct: 600 NVMKALSFHKQMLQRGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNCCSLADAEASK 659

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRG 497
            LI        V+  +D+L  + K G
Sbjct: 660 ALIDLNLNEGNVDAVLDVLHGMAKDG 685


>gi|326489757|dbj|BAK01859.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 746

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 233/454 (51%), Gaps = 8/454 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  +C RG+L +A KL+D MA +    +     ++I  L    ++  A +VL
Sbjct: 286 DVVTYGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVL 345

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M M G   D + +  ++ G C +G + +A  L +EM   G   D +T+  ++  +   
Sbjct: 346 EDMTMHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRA 405

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K+A    ++ + KG    ++TYT+LI+  CK+  +  A  V ++M     +P++VTY
Sbjct: 406 GELKEADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTY 465

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L +  CKQG    A  +++ + ++G+E N  TYN+L++ L   G  +   +I+  M  
Sbjct: 466 TALSDGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEA 525

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A H   V+TY  LI+ LCK G  DRA N   +M+ K  +P I TYN ++   C  G +  
Sbjct: 526 AGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEG 585

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM----VLYGQMMENGISPDDITHR 471
             +LL  +   +  P ++TYN+L+    K+ C++K M     +Y  M    ++P++ T+ 
Sbjct: 586 GKKLLEWMLEKNVRPNVVTYNSLM----KQYCIDKNMKSTTEIYKGMHSQEVAPNENTYN 641

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            LI G C+A  ++EA+   +E+ ++G ++  S+Y  +I  L K KK   A    + M + 
Sbjct: 642 ILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSALIRLLNKKKKFSEARVFFDKMRNE 701

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               +  V+S  +    ++   E    L  +L+E
Sbjct: 702 GLTAEPDVYSFYMDISFNEDNLESTITLCDELVE 735



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 217/445 (48%), Gaps = 3/445 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           ++N +L+   S G+L DA +  D M+     PD      ++ G      +E A K+L  M
Sbjct: 257 SHNILLKALLSAGRLKDACQHFDEMS---SPPDVVTYGTMVHGYCVRGELENAVKLLDEM 313

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G   +   Y  ++  LC +GQ+  A+ +L++M++ G   D + + T++      G  
Sbjct: 314 AAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDL 373

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   +++  ++G     +T+T LI  +C+   +  A  VL +M  +G   D+VTY  L
Sbjct: 374 AAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVL 433

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G   +A  V N ++ R + PN +TY  L   L  +G   A +++L  M     
Sbjct: 434 IDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGL 493

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              V+TYN LINGLCK+G +++A+    +M +   + D+ TY T++  LCK G  + A  
Sbjct: 494 ELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHN 553

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +      P + TYN L++G    G +E    L   M+E  + P+ +T+ +L+  +C
Sbjct: 554 MLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYC 613

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
               ++   ++ K +  +      + Y ++I G CK++ +  A+   + MI    +   +
Sbjct: 614 IDKNMKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTAS 673

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            +S +++ +       EA   + K+
Sbjct: 674 SYSALIRLLNKKKKFSEARVFFDKM 698



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/390 (26%), Positives = 192/390 (49%), Gaps = 7/390 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E++      ++   C++G+++DA ++++ M       D      +I G      +  A 
Sbjct: 318 LESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSKGDLAAAR 377

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + M   G   D +T+  ++ GLC+ G+++ A  +L EM   G + DV+TY  ++   
Sbjct: 378 RLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTYTVLIDGY 437

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A     + + +   P ++TYT L + +CKQ  +  A E+L +M  +G   ++
Sbjct: 438 CKRGNMVEAFRVHNEMVGRRVAPNVVTYTALSDGLCKQGDVRAANELLHEMCNKGLELNV 497

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYNSL+N  CK G  + A+ ++  + + G   +  TY TL+ +L   G +D    +L  
Sbjct: 498 YTYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQE 557

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +    P++ TYN+L+NG C  G V+        M+ KN +P++VTYN+++   C +  
Sbjct: 558 MLDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKN 617

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +    ++   ++    +P   TYN LI G  K   M++A+  + +M+E G+     ++  
Sbjct: 618 MKSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSA 677

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
           LI    +  +  EA           +KMRN
Sbjct: 678 LIRLLNKKKKFSEARVFF-------DKMRN 700



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/369 (26%), Positives = 186/369 (50%), Gaps = 7/369 (1%)

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
           R  +  AIAL  E+     + +V ++N +L+ +   G+ K A   + +      PP ++T
Sbjct: 237 RLPLDEAIALFRELP----DKNVCSHNILLKALLSAGRLKDACQHFDEM---SSPPDVVT 289

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           Y  ++   C +  +  A+++LD+MA +G   +   Y S++   C +G+  DA+ V+ ++ 
Sbjct: 290 YGTMVHGYCVRGELENAVKLLDEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMT 349

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
             G+  +++ + T++    S+G   A  ++ + M +   +    T+  LINGLC+ G + 
Sbjct: 350 MHGVALDAVVFTTVISGFCSKGDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELK 409

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A     +MV K    D+VTY  ++   CK G + EA ++ + + G   +P ++TY  L 
Sbjct: 410 EADRVLQEMVDKGLDVDVVTYTVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTALS 469

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DGL K+G +  A  L  +M   G+  +  T+ +LI G C+   +E+A+ ++ E+   G++
Sbjct: 470 DGLCKQGDVRAANELLHEMCNKGLELNVYTYNSLINGLCKFGNLEQAMRIMTEMEAAGHR 529

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +I  LCKS + D A  +L+ M+    KP    ++ ++      G  E   KL
Sbjct: 530 TDVYTYTTLIDTLCKSGEFDRAHNMLQEMLDKGIKPSIATYNVLMNGFCMSGRVEGGKKL 589

Query: 560 WQKLIEWKV 568
            + ++E  V
Sbjct: 590 LEWMLEKNV 598



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 84/337 (24%), Positives = 147/337 (43%), Gaps = 30/337 (8%)

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD-------IVTYNSLVNFSCKQG 306
           P  L  + I      ++ G ARAI V    A+   SP        I TY +   FS    
Sbjct: 148 PHLLQCFAIAAHLAVREPGTARAILV---RALRFPSPHRHFVEQFIFTYKA---FSSDPA 201

Query: 307 KYDDAVL------VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
            +D  +L      ++  L   G+ P+  + N +L  L        +D+ + +  E     
Sbjct: 202 SFDLLLLCLPSAELLRRLRQYGLSPSPESCNAVLSRL-------PLDEAIALFRELPDK- 253

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V ++NIL+  L   G +  A   F++M S    PD+VTY T++   C  G L  A++LL
Sbjct: 254 NVCSHNILLKALLSAGRLKDACQHFDEMSSP---PDVVTYGTMVHGYCVRGELENAVKLL 310

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +           Y ++I  L  KG +  A+ +   M  +G++ D +   T+I GFC  
Sbjct: 311 DEMAAKGLESNATVYTSVIALLCNKGQVSDALRVLEDMTMHGVALDAVVFTTVISGFCSK 370

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             +  A  L +E+ KRG       +  +I+GLC++ ++  A +VL+ M+      D   +
Sbjct: 371 GDLAAARRLFEEMQKRGLAADRVTHTALINGLCRAGELKEADRVLQEMVDKGLDVDVVTY 430

Query: 541 STIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           + ++      G   EA+++  +++  +V     T  A
Sbjct: 431 TVLIDGYCKRGNMVEAFRVHNEMVGRRVAPNVVTYTA 467



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 56/240 (23%), Positives = 106/240 (44%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G L  A +++  M       D +    LI  L +    ++A  +LQ M
Sbjct: 499 TYNSLINGLCKFGNLEQAMRIMTEMEAAGHRTDVYTYTTLIDTLCKSGEFDRAHNMLQEM 558

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P   TYN+++ G C  G++     LL+ M      P+V+TYN++++    +   
Sbjct: 559 LDKGIKPSIATYNVLMNGFCMSGRVEGGKKLLEWMLEKNVRPNVVTYNSLMKQYCIDKNM 618

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K     +K    +   P   TY ILI+  CK   +  A+    +M  +G      +Y++L
Sbjct: 619 KSTTEIYKGMHSQEVAPNENTYNILIKGHCKARNMKEALYFHQEMIEKGLRLTASSYSAL 678

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K+ K+ +A +  + + + G+      Y+  +    +    ++   + D + EASH
Sbjct: 679 IRLLNKKKKFSEARVFFDKMRNEGLTAEPDVYSFYMDISFNEDNLESTITLCDELVEASH 738


>gi|115438490|ref|NP_001043552.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|21104680|dbj|BAB93270.1| fertility restorer homologue-like [Oryza sativa Japonica Group]
 gi|113533083|dbj|BAF05466.1| Os01g0611900 [Oryza sativa Japonica Group]
 gi|125571150|gb|EAZ12665.1| hypothetical protein OsJ_02580 [Oryza sativa Japonica Group]
 gi|215767882|dbj|BAH00111.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 800

 Score =  214 bits (544), Expect = 1e-52,   Method: Compositional matrix adjust.
 Identities = 121/417 (29%), Positives = 222/417 (53%), Gaps = 1/417 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+GL+  D++ K +  L   +   G+PD  TYN+++  LC+R +IR A+ L ++M+ +G
Sbjct: 358 VIKGLLN-DKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETG 416

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P ++TY+++L     NG   +A+  + +   KG  P ++TYT L++    +    +A 
Sbjct: 417 VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAY 476

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L +M   G S +  TYN+L+N  C  G+  +   ++    + G  P ++TYN++++  
Sbjct: 477 ALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGF 536

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G   +   +   M      P + TY   I+G CK    D A+   N +  K  +PDI
Sbjct: 537 IKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDI 596

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
             YN+++   C+EG ++ ALQ+L L+      P +  YN+ I G      ME+A+ LY +
Sbjct: 597 AAYNSLIFGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEK 656

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M++ GI  D  T+ TLI GF +   V  A+ L  E+  +GN   +  +  + HGLC++  
Sbjct: 657 MIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGD 716

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +D A ++L+ M     +P+  +++ ++     +G  +EA++L  +++E K+    TT
Sbjct: 717 IDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 128/470 (27%), Positives = 223/470 (47%), Gaps = 36/470 (7%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G   DA +L D M      PD   C   I  L ++    +A  VL+ M  +G VP   T+
Sbjct: 191 GMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTF 250

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N +V  L K G++  A+ + DE+  +G +  V+   T++       + ++A+  +++ LR
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR 310

Query: 251 KGCPPYLITYTILIE------------QVCKQC-----------------GIAR------ 275
            G  P  +TYT+LI             ++C+Q                  G+        
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKD 370

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ +  +MA  G  PD  TYN L+++ C++ K  +A+ +   +   G++P  +TY++LL 
Sbjct: 371 AVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLL 429

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                GC D   K+   M     +P V TY  L+ G       D+A     +M       
Sbjct: 430 CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSC 489

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +  TYNT++  LC  G + E  ++L         P  +TYN++I+G  K G M  A  +Y
Sbjct: 490 NDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVY 549

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            QM   GI P+ +T+ + I G+C+    + A+ +L ++  +G +   +AY  +I G C+ 
Sbjct: 550 QQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGFCQE 609

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +  A+QVL LM+     P+ +V+++ +    +  M EEA +L++K+I+
Sbjct: 610 GNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIK 659



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 190/388 (48%), Gaps = 3/388 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           ++R   +    + A ++   M  S   PD    ++ +  LCK      A+ +L +M  +G
Sbjct: 183 VMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAG 242

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P   T+N+++  +   G+ ++A+    + L  G    ++  T L+   C Q  + +A+
Sbjct: 243 FVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKAL 302

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++ ++   +G  P  VTY  L+    ++G  + A  +   +   G+ P++  +N ++  L
Sbjct: 303 DIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362

Query: 338 GSRGCW-DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
            +   W DAV    ++ +  S  P  FTYNILI+ LC+   +  A+N + +M     +P 
Sbjct: 363 LNDKLWKDAVSLFKEMAD--SGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPY 420

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           IVTY+++L   C  G ++EA++L   + G   +P ++TY TL+ G   K   +KA  L  
Sbjct: 421 IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLA 480

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M +NG+S +D T+ TLI G C   +V E  ++LK     G       Y  +I+G  K+ 
Sbjct: 481 EMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAG 540

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIV 544
            +  A  V + M +    P+   +++ +
Sbjct: 541 MMGSAFAVYQQMCAKGIPPNIVTYTSFI 568



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 175/390 (44%), Gaps = 42/390 (10%)

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           EM   G   D   ++ ++R  F  G +  A+  + +       P     ++ I  +CK  
Sbjct: 167 EMRGKGRPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
              RA+ VL  M   G  P   T+NS+V+   K G+ ++A+ + + LL+ G + + +   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 332 TLLHSLGSRGCWD-AVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRA------ 381
           TL+H      C    V K LDI  E       PT  TY +LI G  + G+ ++A      
Sbjct: 287 TLMHGY----CLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQ 342

Query: 382 ---------INSFNQMV-------------------SKNCQPDIVTYNTVLGALCKEGML 413
                     N FN ++                   + +  PD  TYN ++  LC+   +
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKI 402

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EAL L   +N +   P ++TY++L+      GCM++A+ LY +M   G +P+ +T+ TL
Sbjct: 403 REALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL 462

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           + G       ++A  LL E+ + G    +  Y  +I+GLC   +V    ++L+   +  +
Sbjct: 463 MKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            P    +++I+      GM   A+ ++Q++
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 132/293 (45%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  ++ T N ++   C  G++ +  +++        +P      ++I G I+   +  A 
Sbjct: 487 VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAF 546

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V Q M   G  P+ +TY   + G CK      A+ +L+++   G  PD+  YN+++   
Sbjct: 547 AVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIFGF 606

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+      L+ G  P +  Y   I        +  A+ + + M  EG   D 
Sbjct: 607 CQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRLYEKMIKEGIDLDT 666

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY +L++   K G    A+ + + ++++G  P+ IT+  L H L   G  D   K+LD 
Sbjct: 667 ATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
           MN     P V  YN+LING  + G +  A    ++M+ +   PD  TY+ ++G
Sbjct: 727 MNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVG 779



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 128/286 (44%), Gaps = 1/286 (0%)

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G +PD  +   L+  + +     DA+ ++  +  +G   ++  ++ ++ +    G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGRPLDAWMFDVVMRACFKEGM 192

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           +D   ++ D M  +   P     ++ I  LCK    +RA+    +M      P   T+N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           V+  L K G + EAL +   L  +     ++   TL+ G   +  + KA+ ++ + + +G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + P D+T+  LI G       E+A +L +++   G     + + +VI GL   K    A+
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            + + M  S   PD   ++ ++  +       EA  LW+K+ E  V
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417


>gi|302820627|ref|XP_002991980.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
 gi|300140222|gb|EFJ06948.1| hypothetical protein SELMODRAFT_162081 [Selaginella moellendorffii]
          Length = 509

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 226/449 (50%), Gaps = 3/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T   +++ FC   ++  A  L+  M      P      +LIR L  ++  +KA ++ 
Sbjct: 51  DDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIF 110

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+     PD   Y +++G LCK  ++  A +  + M  SGC PD +TY  ++ ++F  
Sbjct: 111 HQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKA 170

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K++Q    +++ L KG  P L+TY  ++   CK   I +A+ ++  +   G SP    Y
Sbjct: 171 CKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLY 230

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  CK  ++D+A  +    ++ G   + I Y + +  L   G  D    +   M E
Sbjct: 231 STLIDGLCKHDRHDEARELFE--MAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIE 288

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A  +P   +YN++I  LCK   V  A    +Q + + C P +     ++  LCK   + E
Sbjct: 289 AGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEE 348

Query: 416 ALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           A  +L  +L     +P ++TY+ +IDGL K   ++ A V+  +M   G  PD +T+  +I
Sbjct: 349 ACVILERMLETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAII 408

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             FC+  +++EA +L + + +RG  +   AY ++I G C++ KVD AI ++E M     +
Sbjct: 409 DAFCKVGRLDEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQ 468

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           P+    STIV  +  +   EEA  L +K+
Sbjct: 469 PNVVSLSTIVDGLCKESRVEEARLLMEKM 497



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/379 (26%), Positives = 186/379 (49%), Gaps = 3/379 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           +T T N ++      G  R A  +  +  V+   PD  TY T++R      +  QA+   
Sbjct: 16  NTYTCNSLLEVFVNDGCHREAYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLL 75

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            +    G  P ++T+  LI ++C+     +A+++   M      PD   Y  ++   CK 
Sbjct: 76  GEMKAAGITPTIVTFGSLIRKLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKI 135

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
            K D A      ++  G  P+ +TY  L+HSL     W+   +I + M    HSP + TY
Sbjct: 136 NKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTY 195

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
             ++NG CK G +D+A++   ++      P    Y+T++  LCK    +EA +L  +  G
Sbjct: 196 ATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAAG 255

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
                 +I Y + I GL K G +++A  ++ +M+E G +PD +++  +I+  C+ ++V E
Sbjct: 256 DVQD--VIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSE 313

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK-PDDTVFSTIV 544
           A +L+ +  +R          +++ GLCKS++V+ A  +LE M+ +  + P    +S ++
Sbjct: 314 AKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSAVI 373

Query: 545 KKVADDGMTEEAYKLWQKL 563
             +      ++AY + QK+
Sbjct: 374 DGLCKADRLDDAYVVLQKM 392



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 88/310 (28%), Positives = 160/310 (51%), Gaps = 3/310 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G++  A  L+  +    + P       LI GL + DR ++A ++ ++ 
Sbjct: 194 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMA 253

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G V D I Y   + GLCK G++  A A+  +M  +GC PD ++YN I+ ++  + + 
Sbjct: 254 --AGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 311

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNS 297
            +A       + + C P +   T+L++ +CK   +  A  +L+ M   G  +P +VTY++
Sbjct: 312 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLETGDRAPSVVTYSA 371

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  CK  + DDA +V+  +   G  P+ +TY  ++ +    G  D   ++   M+E  
Sbjct: 372 VIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERG 431

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +  V  YNILI G C+   VD AI    +M  +  QP++V+ +T++  LCKE  + EA 
Sbjct: 432 CALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTIVDGLCKESRVEEAR 491

Query: 418 QLLHLLNGSS 427
            L+  +N  S
Sbjct: 492 LLMEKMNFES 501



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 92/380 (24%), Positives = 172/380 (45%), Gaps = 34/380 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D      ++ + C   KL  A+   + M +   +PD      L+  L +  + E+  
Sbjct: 118 VKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLPDKVTYTVLVHSLFKACKWEQGH 177

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP------------ 220
           ++ + M+  G  P+ +TY  +V G CK G+I  A++L+  +  +G  P            
Sbjct: 178 QIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGL 237

Query: 221 ---------------------DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
                                DVI Y + +  +   GK  +A       +  GC P  ++
Sbjct: 238 CKHDRHDEARELFEMAAGDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVS 297

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           Y ++I  +CK   ++ A E++D      C P +     LV+  CK  + ++A +++  +L
Sbjct: 298 YNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERML 357

Query: 320 SRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             G   P+ +TY+ ++  L      D    +L  M  A   P V TY  +I+  CK G +
Sbjct: 358 ETGDRAPSVVTYSAVIDGLCKADRLDDAYVVLQKMRRAGCVPDVVTYTAIIDAFCKVGRL 417

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A   F +M  + C  D+V YN ++   C+   ++EA+ ++  + G    P +++ +T+
Sbjct: 418 DEARELFQRMHERGCALDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRGIQPNVVSLSTI 477

Query: 439 IDGLAKKGCMEKAMVLYGQM 458
           +DGL K+  +E+A +L  +M
Sbjct: 478 VDGLCKESRVEEARLLMEKM 497



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 86/292 (29%), Positives = 139/292 (47%), Gaps = 2/292 (0%)

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A  V  D  +    PD  TY +L+   CK  +   AV ++  + + G+ P  +T+ +L+ 
Sbjct: 36  AYRVFKDELVTLFRPDDFTYGTLIRGFCKAEQIPQAVNLLGEMKAAGITPTIVTFGSLIR 95

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L      D   +I   M +    P  F Y ++I  LCK   +D A + F +MV   C P
Sbjct: 96  KLCELNFTDKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFERMVQSGCLP 155

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D VTY  ++ +L K     +  Q+   +     SP L+TY T+++G  K G +++A+ L 
Sbjct: 156 DKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLM 215

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            ++   G SP    + TLI G C+ D+ +EA +L +     G+      Y   I GLCK+
Sbjct: 216 RRLKGTGRSPSGSLYSTLIDGLCKHDRHDEARELFEMAA--GDVQDVIVYTSFISGLCKA 273

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
            K+D A  V   MI +   PD   ++ I+  +  D    EA +L  + +E K
Sbjct: 274 GKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERK 325


>gi|359474768|ref|XP_002270963.2| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic [Vitis vinifera]
          Length = 1022

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 225/445 (50%), Gaps = 4/445 (0%)

Query: 123 ILQNFCSRGK---LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           ++  +C++ +     +A  +   +A +   P    C  L+  L++ + +EK+  V + M 
Sbjct: 247 LIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM- 305

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  PD   ++  +   CK G++  AI L  +M   G  P+V+TYN ++  +  +G   
Sbjct: 306 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 365

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A  F +  ++ G    LITY++LI  + K      A  VL +   +G +P+ V YN+L+
Sbjct: 366 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 425

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK G   DA+ +  +++S+G+ PNS+T N+++      G  +  + IL+ M     S
Sbjct: 426 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 485

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
                +  +I+ LC     + A+    +M+ +N +P+     T++G LCKEG  ++A++L
Sbjct: 486 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 545

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              L        L+T N LI GL K G M++A+ L  +M+E G   D IT+ TLI G C+
Sbjct: 546 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK 605

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             +VEE   L  E+ K+G +     Y L+IHG+C+  K+D A+ +     S    P+   
Sbjct: 606 EGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYT 665

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLI 564
           +  ++         EE  KL+ +L+
Sbjct: 666 YGVMIDGYCKADKIEEGEKLFTELL 690



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 221/444 (49%), Gaps = 6/444 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E   N ++  +C  G L DA ++   M  +   P+     ++I+G  +I ++E+A  +L
Sbjct: 417 NEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECIL 476

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G   +   +  ++  LC   +  SA+  L EM +    P+     T++  +   
Sbjct: 477 EEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKE 536

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+  W   L KG    L+T   LI  +CK   +  A+ +L  M   G   D +TY
Sbjct: 537 GKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITY 596

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK+GK ++   +   ++ +G+EP++ TYN L+H +   G    +D+ +++ NE
Sbjct: 597 NTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIG---KLDEAVNLWNE 653

Query: 356 ASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
                  P V+TY ++I+G CK   ++     F +++++N + + V YNT++ A C+ G 
Sbjct: 654 CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 713

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             EA +L   +      P   TY++LI G+   G ME A  L  +M + G+ P+ + +  
Sbjct: 714 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA 773

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G+C+  Q+++ V++L+E+           Y ++I G  KS  +  A ++L  M+   
Sbjct: 774 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 833

Query: 533 YKPDDTVFSTIVKKVADDGMTEEA 556
             PD   ++ +      +G  EE 
Sbjct: 834 IVPDTVTYNVLTNGFCKEGKIEEG 857



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/481 (25%), Positives = 223/481 (46%), Gaps = 35/481 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G L +A +  + M +            LI GL+++++  +A+ VL+  
Sbjct: 350 TYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKET 409

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN------------ 226
           +  G  P+ + YN ++ G CK G +  A+ +  +M   G  P+ +T N            
Sbjct: 410 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 469

Query: 227 -----------------------TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                                  TI+  +  N +F+ A+ F ++ L +   P     T L
Sbjct: 470 EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTL 529

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           +  +CK+   + A+E+   +  +G   ++VT N+L++  CK G   +AV ++  +L RG 
Sbjct: 530 VGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 589

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             + ITYNTL+      G  +   K+   M +    P  FTYN+LI+G+C+ G +D A+N
Sbjct: 590 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVN 649

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            +N+  S++  P++ TY  ++   CK   + E  +L   L   +     + YNTLI    
Sbjct: 650 LWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 709

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           + G   +A  L+  M   GI P   T+ +LI G C   ++E+A  L+ E+ K G      
Sbjct: 710 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVV 769

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I G CK  ++D  + VL+ M S    P+   ++ ++   +  G  + A KL  ++
Sbjct: 770 CYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 829

Query: 564 I 564
           +
Sbjct: 830 V 830



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 211/431 (48%), Gaps = 2/431 (0%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           FC  GK+ DA +L   M +    P+     NLI GL +   +++A +  + MV  G    
Sbjct: 323 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 382

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            ITY++++ GL K  +   A ++L E    G  P+ + YNT++      G    A+    
Sbjct: 383 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 442

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           D + KG  P  +T   +I+  CK   + +A  +L++M   G S +   + +++++ C   
Sbjct: 443 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 502

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW-DAVDKILDIMNEASHSPTVFTY 365
           +++ A+  +  +L R M PN     TL+  L   G   DAV+    ++ E      + T 
Sbjct: 503 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL-EKGFGANLVTT 561

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N LI+GLCK G +  A+    +M+ +    D +TYNT++   CKEG + E  +L   +  
Sbjct: 562 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 621

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P   TYN LI G+ + G +++A+ L+ +     + P+  T+  +I G+C+AD++EE
Sbjct: 622 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 681

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
              L  E+  +  ++ +  Y  +I   C++     A ++ + M S    P    +S+++ 
Sbjct: 682 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 741

Query: 546 KVADDGMTEEA 556
            + + G  E+A
Sbjct: 742 GMCNIGRMEDA 752



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 177/354 (50%), Gaps = 7/354 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  GK +DA +L   +  +    +      LI GL +   +++A ++L+ M+  G
Sbjct: 529 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 588

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V D ITYN ++ G CK G++     L  EM   G EPD  TYN ++  M   GK  +A+
Sbjct: 589 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 648

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             W +   +   P + TY ++I+  CK   I    ++  ++  +    + V YN+L+   
Sbjct: 649 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 708

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G   +A  + +++ S+G+ P + TY++L+H + + G  +    ++D M +    P V
Sbjct: 709 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 768

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y  LI G CK G +D+ +N   +M S +  P+ +TY  ++    K G +  A +LLH 
Sbjct: 769 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 828

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI---SPDDITHRTL 473
           + G    P  +TYN L +G  K+G +E+  +L     E+G+   SP  + H   
Sbjct: 829 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGKLL----AEDGVGFNSPLFLIHEAF 878



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 195/402 (48%), Gaps = 41/402 (10%)

Query: 202 QIRSAIALLDEMSVSG---CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           +I SA+A L+E+  SG      D++ +  +  T F N  F+ AIG ++    KG  P + 
Sbjct: 223 EIASAMADLNEVGESGVAVAAVDLLIH--VYCTQFRNVGFRNAIGVFRFLANKGVFPTVK 280

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T T L+  + K   + ++  V + M  +G SPD+  +++ +N  CK GK +DA+ +  ++
Sbjct: 281 TCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDM 339

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G+ PN +TYN L+H L   G  D   +  + M +   + T+ TY++LINGL K    
Sbjct: 340 EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 399

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + A +   + + K   P+ V YNT++   CK G L +AL++   +     +P  +T N++
Sbjct: 400 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 459

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGIS---------------------------------- 464
           I G  K G ME+A  +  +M+  G S                                  
Sbjct: 460 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 519

Query: 465 -PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P+D    TL+ G C+  +  +AV+L   + ++G          +IHGLCK+  +  A++
Sbjct: 520 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 579

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +L+ M+   +  D   ++T++     +G  EE +KL  ++++
Sbjct: 580 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 621



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 57/229 (24%), Positives = 113/229 (49%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T N ++   C  GKL +A  L +    R+ +P+ +    +I G  + D+IE+  
Sbjct: 624 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 683

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+   ++      +++ YN ++   C+ G    A  L D+M   G  P   TY++++  M
Sbjct: 684 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 743

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            + G+ + A     +  ++G  P ++ YT LI   CK   + + + VL +M+     P+ 
Sbjct: 744 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 803

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +TY  +++   K G    A  +++ ++ +G+ P+++TYN L +     G
Sbjct: 804 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEG 852



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 1/195 (0%)

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           AI  F  + +K   P + T   +L +L K   L ++  +   +     SP +  ++T I+
Sbjct: 263 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAIN 321

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
              K G +E A+ L+  M + G+SP+ +T+  LI G C+   ++EA    +++ K G   
Sbjct: 322 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 381

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y ++I+GL K +K + A  VL+  +   + P++ V++T++      G   +A ++ 
Sbjct: 382 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 441

Query: 561 QKLIEWKVFEKGTTL 575
             ++   +     TL
Sbjct: 442 GDMVSKGINPNSVTL 456



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 43/140 (30%), Positives = 70/140 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C+ G++ DA  LID M +   +P+      LI G  ++ +++K   VLQ M
Sbjct: 735 TYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEM 794

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+ ITY +M+ G  K G +++A  LL EM   G  PD +TYN +       GK 
Sbjct: 795 SSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKI 854

Query: 239 KQAIGFWKDQLRKGCPPYLI 258
           ++     +D +    P +LI
Sbjct: 855 EEGKLLAEDGVGFNSPLFLI 874


>gi|413950074|gb|AFW82723.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 643

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 222/459 (48%), Gaps = 30/459 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C   ++  A K++D MAR+   PD      ++  L ++DR+++A++VL  M
Sbjct: 161 TYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM 220

Query: 179 ------------------------------VMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
                                         V  G  P+ ITY  +V   CK G++R A A
Sbjct: 221 PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACA 280

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           +L  M ++GC P+V+T+  ++R +FD+G+   A+  W+  + +G  P  ++Y ILI  +C
Sbjct: 281 ILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLC 340

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
               +  A  +L+ M   GC P++ TY++L++   K G    A+ + N++   G +PN +
Sbjct: 341 SVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVV 400

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            Y  ++     +  ++    ++D M   +  P   T+N LI  LC    V RA+  F++M
Sbjct: 401 VYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM 460

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
               C P+  TYN ++  L +EG   +AL ++  +        L+TYNT++ GL +    
Sbjct: 461 RRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 520

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +AMV  G+M+  GI P+  T   +I  +C+  +V  A  +L  +           Y ++
Sbjct: 521 REAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTIL 580

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +  LC   K+  A+  L  M+     P+   ++ +V+ V
Sbjct: 581 MAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 189/376 (50%), Gaps = 2/376 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I+  FC  G+L  A  ++  M      P+      L+RGL    R+  A  + + M
Sbjct: 261 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 320

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P T++YN+++ GLC  G ++ A ++L+ M   GC P+V TY+T++      G  
Sbjct: 321 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 380

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI  W D  R GC P ++ YT +++  CK+    +A  ++D M +E C P+ VT+N+L
Sbjct: 381 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 440

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEAS 357
           +   C   +   A+ V + +   G  PN  TYN L+H L   G C DA+  + + M    
Sbjct: 441 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE-MQSHG 499

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
              ++ TYN +++GLC+  +   A+    +M+ +  QP+  T++ ++ A CKEG +  A 
Sbjct: 500 IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA 559

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L  +N  +C   ++ Y  L+  L  +  +  AM    +M+  GI P+ +T   L+ G 
Sbjct: 560 WMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 619

Query: 478 CRADQVEEAVDLLKEI 493
            R     E  D ++ I
Sbjct: 620 FRNLGCIEPSDFIQHI 635



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 196/402 (48%), Gaps = 30/402 (7%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM-----FDNG--- 236
           P+  TYN++V  LC+  ++ +A  +LDEM+  GC PD +TY TI+  +      D     
Sbjct: 157 PNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEV 216

Query: 237 ----------------------KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
                                 + ++      D + +G  P +ITYT +++  CK   + 
Sbjct: 217 LAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELR 276

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A  +L  M I GC+P++VT+ +LV      G+  DA+ +   +++ G  P++++YN L+
Sbjct: 277 MACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILI 336

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
             L S G       IL+ M +    P V TY+ LI+G  K G +  AI+ +N M    C+
Sbjct: 337 RGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCK 396

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P++V Y  ++   CK+ M N+A  L+  +   +C P  +T+NTLI  L     + +A+ +
Sbjct: 397 PNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGV 456

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M  +G  P+  T+  LI G  R     +A+ ++ E+   G ++    Y  V+ GLC+
Sbjct: 457 FHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQ 516

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           ++    A+  +  MI    +P+   FS I+     +G    A
Sbjct: 517 TRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMA 558



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 105/398 (26%), Positives = 177/398 (44%), Gaps = 32/398 (8%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C    + + + + D M   G  P+V TYN ++R +  N +   A     +  RKGCPP  
Sbjct: 135 CGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARKGCPPDD 194

Query: 258 ITYTILIEQVCKQCGIARAIEVL------------------------------DDMAIEG 287
           +TY  ++  +CK   +  A EVL                               DM   G
Sbjct: 195 VTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVSDMVGRG 254

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAV 346
             P+++TY ++V+  CK G+   A  ++  ++  G  PN +T+  L+  L   G   DA+
Sbjct: 255 LQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDAL 314

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           D +   M     +P+  +YNILI GLC  G +  A +  N M    C P++ TY+T++  
Sbjct: 315 D-MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDG 373

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
             K G L  A+ + + ++ S C P ++ Y  ++D   KK    +A  L  +M+     P+
Sbjct: 374 FSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPN 433

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T  TLI   C   +V  A+ +  E+ + G       Y  +IHGL +      A+ ++ 
Sbjct: 434 TVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVT 493

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            M S   +     ++T+V  +    M+ EA     K+I
Sbjct: 494 EMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMI 531



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 150/311 (48%), Gaps = 5/311 (1%)

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
           PP   + T    + C +  +   + V D+M  +G  P++ TYN LV   C+  +   A  
Sbjct: 121 PPSRGSTTTSSTRCCGENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARK 180

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           +++ +  +G  P+ +TY T++  L      D +D+  +++  A+  P   +YN ++  LC
Sbjct: 181 MLDEMARKGCPPDDVTYATIVSVLCK---LDRLDEATEVL--AAMPPVAASYNAIVLALC 235

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           +   +    +  + MV +  QP+++TY T++ A CK G L  A  +L  +  + C+P ++
Sbjct: 236 REFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVV 295

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           T+  L+ GL   G +  A+ ++  M+  G +P  +++  LI G C    ++ A  +L  +
Sbjct: 296 TFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSM 355

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            + G       Y  +I G  K+  +  AI +   M  S  KP+  V++ +V       M 
Sbjct: 356 EQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMF 415

Query: 554 EEAYKLWQKLI 564
            +A  L  K++
Sbjct: 416 NQAKSLIDKML 426


>gi|15238562|ref|NP_200798.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171023|sp|Q9FJE6.1|PP437_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At5g59900
 gi|9757911|dbj|BAB08358.1| unnamed protein product [Arabidopsis thaliana]
 gi|332009866|gb|AED97249.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 907

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 115/433 (26%), Positives = 229/433 (52%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A +L + M      PD +    +IR L  +  + +A +++  M  +G   + + YN+++ 
Sbjct: 211 AMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEMIAHMEATGCDVNIVPYNVLID 270

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
           GLCK+ ++  A+ +  +++    +PDV+TY T++  +    +F+  +    + L     P
Sbjct: 271 GLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLCLRFSP 330

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
                + L+E + K+  I  A+ ++  +   G SP++  YN+L++  CK  K+ +A L+ 
Sbjct: 331 SEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLF 390

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           + +   G+ PN +TY+ L+     RG  D     L  M +     +V+ YN LING CK+
Sbjct: 391 DRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKF 450

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G +  A     +M++K  +P +VTY +++G  C +G +N+AL+L H + G   +P + T+
Sbjct: 451 GDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTF 510

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
            TL+ GL + G +  A+ L+ +M E  + P+ +T+  +I G+C    + +A + LKE+ +
Sbjct: 511 TTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTE 570

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           +G      +YR +IHGLC + +   A   ++ +     + ++  ++ ++     +G  EE
Sbjct: 571 KGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEE 630

Query: 556 AYKLWQKLIEWKV 568
           A  + Q++++  V
Sbjct: 631 ALSVCQEMVQRGV 643



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 224/444 (50%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C + K+ +A  +   +A ++  PD      L+ GL ++   E   +++  M+ 
Sbjct: 266 NVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCKVQEFEIGLEMMDEMLC 325

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P     + +V GL KRG+I  A+ L+  +   G  P++  YN ++ ++    KF +
Sbjct: 326 LRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHE 385

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   +    + G  P  +TY+ILI+  C++  +  A+  L +M   G    +  YNSL+N
Sbjct: 386 AELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLIN 445

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G    A   +  ++++ +EP  +TY +L+    S+G  +   ++   M     +P
Sbjct: 446 GHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAP 505

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +++T+  L++GL + GL+  A+  FN+M   N +P+ VTYN ++   C+EG +++A + L
Sbjct: 506 SIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFL 565

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P   +Y  LI GL   G   +A V    + +     ++I +  L+ GFCR 
Sbjct: 566 KEMTEKGIVPDTYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCRE 625

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++EEA+ + +E+ +RG  +    Y ++I G  K K   +   +L+ M     KPDD ++
Sbjct: 626 GKLEEALSVCQEMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIY 685

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           ++++   +  G  +EA+ +W  +I
Sbjct: 686 TSMIDAKSKTGDFKEAFGIWDLMI 709



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 210/427 (49%), Gaps = 6/427 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +CS+GK+  A +L   M  +   P  +    L+ GL R   I  A K+   M
Sbjct: 474 TYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEM 533

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+ +TYN+M+ G C+ G +  A   L EM+  G  PD  +Y  ++  +   G+ 
Sbjct: 534 AEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPLIHGLCLTGQA 593

Query: 239 KQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            +A  F  D L KG C    I YT L+   C++  +  A+ V  +M   G   D+V Y  
Sbjct: 594 SEAKVFV-DGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGVDLDLVCYGV 652

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++ S K         ++  +  RG++P+ + Y +++ +    G +     I D+M    
Sbjct: 653 LIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFGIWDLMINEG 712

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEA 416
             P   TY  +INGLCK G V+ A    ++M   +  P+ VTY   L  L K E  + +A
Sbjct: 713 CVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILTKGEVDMQKA 772

Query: 417 LQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           ++L + +L G   +    TYN LI G  ++G +E+A  L  +M+ +G+SPD IT+ T+I 
Sbjct: 773 VELHNAILKGLLANTA--TYNMLIRGFCRQGRIEEASELITRMIGDGVSPDCITYTTMIN 830

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             CR + V++A++L   + ++G +    AY  +IHG C + ++  A ++   M+     P
Sbjct: 831 ELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNEMLRQGLIP 890

Query: 536 DDTVFST 542
           ++    T
Sbjct: 891 NNKTSRT 897



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 125/482 (25%), Positives = 215/482 (44%), Gaps = 37/482 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC RGKL  A   +  M         +   +LI G  +   I  A   +  M
Sbjct: 404 TYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEM 463

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +     P  +TY  ++GG C +G+I  A+ L  EM+  G  P + T+ T+L  +F  G  
Sbjct: 464 INKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLI 523

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A+  + +       P  +TY ++IE  C++  +++A E L +M  +G  PD  +Y  L
Sbjct: 524 RDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPDTYSYRPL 583

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG--------CWDAVDKIL 350
           ++  C  G+  +A + ++ L     E N I Y  LLH     G        C + V + +
Sbjct: 584 IHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQEMVQRGV 643

Query: 351 DI---------------------------MNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           D+                           M++    P    Y  +I+   K G    A  
Sbjct: 644 DLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTGDFKEAFG 703

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            ++ M+++ C P+ VTY  V+  LCK G +NEA  L   +   S  P  +TY   +D L 
Sbjct: 704 IWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKMQPVSSVPNQVTYGCFLDILT 763

Query: 444 KKGC-MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
           K    M+KA+ L+  +++ G+  +  T+  LI GFCR  ++EEA +L+  +   G     
Sbjct: 764 KGEVDMQKAVELHNAILK-GLLANTATYNMLIRGFCRQGRIEEASELITRMIGDGVSPDC 822

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +I+ LC+   V  AI++   M     +PD   ++T++      G   +A +L  +
Sbjct: 823 ITYTTMINELCRRNDVKKAIELWNSMTEKGIRPDRVAYNTLIHGCCVAGEMGKATELRNE 882

Query: 563 LI 564
           ++
Sbjct: 883 ML 884



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 110/407 (27%), Positives = 194/407 (47%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +L+ GL +  +IE+A  +++ +V  G  P+   YN ++  LCK  +   A  L D M   
Sbjct: 337 SLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFVYNALIDSLCKGRKFHEAELLFDRMGKI 396

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P+ +TY+ ++      GK   A+ F  + +  G    +  Y  LI   CK   I+ A
Sbjct: 397 GLRPNDVTYSILIDMFCRRGKLDTALSFLGEMVDTGLKLSVYPYNSLINGHCKFGDISAA 456

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
              + +M  +   P +VTY SL+   C +GK + A+ + + +  +G+ P+  T+ TLL  
Sbjct: 457 EGFMAEMINKKLEPTVVTYTSLMGGYCSKGKINKALRLYHEMTGKGIAPSIYTFTTLLSG 516

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G      K+ + M E +  P   TYN++I G C+ G + +A     +M  K   PD
Sbjct: 517 LFRAGLIRDAVKLFNEMAEWNVKPNRVTYNVMIEGYCEEGDMSKAFEFLKEMTEKGIVPD 576

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             +Y  ++  LC  G  +EA   +  L+  +C    I Y  L+ G  ++G +E+A+ +  
Sbjct: 577 TYSYRPLIHGLCLTGQASEAKVFVDGLHKGNCELNEICYTGLLHGFCREGKLEEALSVCQ 636

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M++ G+  D + +  LI G  +    +    LLKE+  RG K  +  Y  +I    K+ 
Sbjct: 637 EMVQRGVDLDLVCYGVLIDGSLKHKDRKLFFGLLKEMHDRGLKPDDVIYTSMIDAKSKTG 696

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
               A  + +LMI+    P++  ++ ++  +   G   EA  L  K+
Sbjct: 697 DFKEAFGIWDLMINEGCVPNEVTYTAVINGLCKAGFVNEAEVLCSKM 743



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/349 (25%), Positives = 174/349 (49%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P+V T + +L  +     F  A+  + D +  G  P +  YT +I  +C+   ++RA E+
Sbjct: 190 PEVRTLSALLHGLVKFRHFGLAMELFNDMVSVGIRPDVYIYTGVIRSLCELKDLSRAKEM 249

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           +  M   GC  +IV YN L++  CK+ K  +AV +  +L  + ++P+ +TY TL++ L  
Sbjct: 250 IAHMEATGCDVNIVPYNVLIDGLCKKQKVWEAVGIKKDLAGKDLKPDVVTYCTLVYGLCK 309

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
              ++   +++D M     SP+    + L+ GL K G ++ A+N   ++V     P++  
Sbjct: 310 VQEFEIGLEMMDEMLCLRFSPSEAAVSSLVEGLRKRGKIEEALNLVKRVVDFGVSPNLFV 369

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           YN ++ +LCK    +EA  L   +      P  +TY+ LID   ++G ++ A+   G+M+
Sbjct: 370 YNALIDSLCKGRKFHEAELLFDRMGKIGLRPNDVTYSILIDMFCRRGKLDTALSFLGEMV 429

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           + G+      + +LI G C+   +  A   + E+  +  +     Y  ++ G C   K++
Sbjct: 430 DTGLKLSVYPYNSLINGHCKFGDISAAEGFMAEMINKKLEPTVVTYTSLMGGYCSKGKIN 489

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            A+++   M      P    F+T++  +   G+  +A KL+ ++ EW V
Sbjct: 490 KALRLYHEMTGKGIAPSIYTFTTLLSGLFRAGLIRDAVKLFNEMAEWNV 538


>gi|297836398|ref|XP_002886081.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331921|gb|EFH62340.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 743

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 234/455 (51%), Gaps = 8/455 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N IL+    +G+L+D   L+  M R   +P+     NL+ G  ++  +++A 
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAF 295

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +++++M  +  +PD  TYN+++ G+C  G IR  + L+D M     +PDV+TYNT++   
Sbjct: 296 QIVELMKQTNILPDLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGC 355

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG---IARAIEVLDDMAIEGCS 289
           F+ G   +A    +     G  P  +T+ I ++ +CK+     + R ++ L +M   G S
Sbjct: 356 FELGLSLEAKKLMEQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEM--HGFS 413

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PDIVTY++L+    K G    A+ ++  +  +G++ N+IT NT+L +L      D    +
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNL 473

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           LD  ++  +     TY  LI G  +   V++A   +++M      P + T+N+++G LC 
Sbjct: 474 LDSAHKRGYIVDEVTYGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCH 533

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G    A++    L  S   P   T+N++I G  K+G +EKA   Y + +++   PD+ T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593

Query: 470 HRTLIWGFCRADQVEEAVDLLKE-IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
              L+ G C+    E+A++     I +R  ++    Y  +I   CK KK+  A  +L  M
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLITER--EVDTVTYNTMISAFCKDKKLKEAYDLLSEM 651

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              R +PD   +++I+  + +DG   EA +L +K 
Sbjct: 652 EEKRLEPDRFTYNSIITSLMEDGKLSEADELLKKF 686



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 219/447 (48%), Gaps = 5/447 (1%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR---IEKASKVLQIMVM 180
           L  +   GK   A ++   M R    P+   C  L+ GL+R      I  A +V   MV 
Sbjct: 138 LSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASAREVFDDMVK 197

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFK 239
            G   D  T+N++V G C  G++  A+ +L+ M S     PD +TYNTIL+ M   G+  
Sbjct: 198 IGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILKAMSKKGRLS 257

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
                  D  R G  P  +TY  L+   CK   +  A ++++ M      PD+ TYN L+
Sbjct: 258 DVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILPDLCTYNILI 317

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  C  G   + + +++ + S  ++P+ +TYNTL+      G      K+++ M      
Sbjct: 318 NGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLMEQMENDGVK 377

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQ 418
           P   T+NI +  LCK    +       ++V  +   PDIVTY+T++ A  K G L+ AL+
Sbjct: 378 PNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  +         IT NT++D L K+  +++A  L     + G   D++T+ TLI G+ 
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMGYF 497

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R ++VE+A ++  E+ +       + +  +I GLC   K ++A++  + +  S   PDD 
Sbjct: 498 REEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDC 557

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            F++I+     +G  E+A++ + + I+
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIK 584



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 109/396 (27%), Positives = 184/396 (46%), Gaps = 40/396 (10%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK---QCGIARA 276
           P    ++  L      GK   A+  ++  +R    P L+T   L+  + +      IA A
Sbjct: 129 PSKALFDIALSAYLHAGKPHVALQVFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSIASA 188

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLH 335
            EV DDM   G S D+ T+N LVN  C +GK +DA+ ++  ++S   + P+++TYNT+L 
Sbjct: 189 REVFDDMVKIGVSLDVKTFNVLVNGYCLEGKLEDALGMLERMVSEFNVNPDNVTYNTILK 248

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           ++  +G    V  +L  M      P   TYN L+ G CK G +  A      M   N  P
Sbjct: 249 AMSKKGRLSDVKDLLLDMKRNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNILP 308

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D+ TYN ++  +C  G + E L+L+ ++      P ++TYNTLIDG  + G   +A  L 
Sbjct: 309 DLCTYNILINGVCNAGSIREGLELMDVMKSLKLQPDVVTYNTLIDGCFELGLSLEAKKLM 368

Query: 456 GQMMENGI------------------------------------SPDDITHRTLIWGFCR 479
            QM  +G+                                    SPD +T+ TLI  + +
Sbjct: 369 EQMENDGVKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLK 428

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              +  A+++++E+G++G KM       ++  LCK +KVD A  +L+      Y  D+  
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVT 488

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           + T++     +   E+A+++W ++   K+    TT 
Sbjct: 489 YGTLIMGYFREEKVEKAFEMWDEMKRIKITPTVTTF 524



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 86/314 (27%), Positives = 153/314 (48%), Gaps = 2/314 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDAS-KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           V+ ++ T+N  L+  C   K  + + K+ +++      PD      LI+  +++  +  A
Sbjct: 376 VKPNQVTHNISLKWLCKEEKREEVTRKVKELVEMHGFSPDIVTYHTLIKAYLKVGDLSGA 435

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            ++++ M   G   +TIT N ++  LCK  ++  A  LLD     G   D +TY T++  
Sbjct: 436 LEMMREMGQKGIKMNTITLNTILDALCKERKVDEAHNLLDSAHKRGYIVDEVTYGTLIMG 495

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
            F   K ++A   W +  R    P + T+  LI  +C       A+E  D++A  G  PD
Sbjct: 496 YFREEKVEKAFEMWDEMKRIKITPTVTTFNSLIGGLCHHGKTELAMEKFDELAESGLLPD 555

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
             T+NS++   CK+G+ + A    N  +    +P++ T N LL+ L   G  +      +
Sbjct: 556 DCTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALNFFN 615

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            +       TV TYN +I+  CK   +  A +  ++M  K  +PD  TYN+++ +L ++G
Sbjct: 616 TLITEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKRLEPDRFTYNSIITSLMEDG 674

Query: 412 MLNEALQLLHLLNG 425
            L+EA +LL   +G
Sbjct: 675 KLSEADELLKKFSG 688


>gi|147858101|emb|CAN78867.1| hypothetical protein VITISV_041982 [Vitis vinifera]
          Length = 962

 Score =  213 bits (543), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 236/482 (48%), Gaps = 35/482 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++     +GK+ +A  ++  + + +  PD     +LI G  R   ++ A  V   M
Sbjct: 242 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 301

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM------------------------- 213
           V  G  P+++TY+ ++ GLC  G++  A+ +L+EM                         
Sbjct: 302 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 361

Query: 214 ----------SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                        GC P+V TY  ++  +   GK + AIG +   L++G  P  +TY  L
Sbjct: 362 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 421

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I ++C     + A+++   M   G   +  TYN ++   C  G  + A+++   +L  G 
Sbjct: 422 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 481

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P  +TYNTL++   ++G  +   ++LD+M E    P  +TYN L++G  K+G ++ A  
Sbjct: 482 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 541

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +MV     P+ V+Y T++    K+G ++ AL LL  +    C+P + +YN +I+GL+
Sbjct: 542 YFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLS 601

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K+    +A  +  +M E G+ P+ IT+ TLI G CR  + + A  +  ++ KR       
Sbjct: 602 KENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 661

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I+GLC+  K D A  +L+ M      PD+  F++++      G  + A+ L +++
Sbjct: 662 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 721

Query: 564 IE 565
           ++
Sbjct: 722 VD 723



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 141/510 (27%), Positives = 240/510 (47%), Gaps = 60/510 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G+ + A K+   M     + +      +I+GL     IEKA  + + M
Sbjct: 417 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 476

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G +P  +TYN ++ G   +G + +A  LLD M  +GCEPD  TYN ++      GK 
Sbjct: 477 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 536

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A  ++++ +  G  P  ++YT LI+   K   +  A+ +L+ M   GC+P++ +YN++
Sbjct: 537 ESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAV 596

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   K+ ++ +A  + + +  +G+ PN ITY TL+  L   G      KI   M +   
Sbjct: 597 INGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 656

Query: 359 SPTVFTYNILINGLCKYGLVDRA----------------------INSF----------- 385
            P ++TY+ LI GLC+ G  D A                      I+ F           
Sbjct: 657 LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFL 716

Query: 386 --NQMVSKNCQPDIVTYNTVLGALCKEGMLNE---ALQ---------------------L 419
              +MV   C+P+  TY+ +L  L KE +L E   A+Q                     L
Sbjct: 717 LLRRMVDVGCKPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNL 776

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  ++   C P L TY+TL+ GL +KG   +A  L   M E G  PD   + +L+   C+
Sbjct: 777 LARMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCK 836

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             +V+ A+ +   I  +G ++  S YR +I  LCK+ +V+ A  + + M+   +  D+ V
Sbjct: 837 NLEVDHALKIFHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIV 896

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           ++ +V  +  +G  +   KL   ++E K F
Sbjct: 897 WTVLVDGLLKEGELDLCMKLLH-IMESKNF 925



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 198/388 (51%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C+     +A +L+  M +R   P+      LI GL R+ ++E A  +   M+  G VP+
Sbjct: 355 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 414

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T+TYN ++  LC  G+  +A+ +   M   G   +  TYN I++ +   G  ++A+  ++
Sbjct: 415 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 474

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             L+ G  P ++TY  LI     +  +  A  +LD M   GC PD  TYN LV+   K G
Sbjct: 475 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 534

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K + A      ++  G+ PN ++Y TL+      G  D    +L+ M E   +P V +YN
Sbjct: 535 KLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYN 594

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +INGL K      A    ++M  +   P+++TY T++  LC+ G    A ++ H +   
Sbjct: 595 AVINGLSKENRFSEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 654

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            C P L TY++LI GL ++G  ++A +L  +M   G++PD++T  +LI GF    +++ A
Sbjct: 655 KCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHA 714

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             LL+ +   G K     Y +++ GL K
Sbjct: 715 FLLLRRMVDVGCKPNYRTYSVLLKGLQK 742



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/469 (25%), Positives = 229/469 (48%), Gaps = 24/469 (5%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  + ++G + +A++L+D+M      PD      L+ G  +  ++E AS   Q M
Sbjct: 487 TYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEM 546

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+ ++Y  ++ G  K G++  A++LL+ M   GC P+V +YN ++  +    +F
Sbjct: 547 VECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRF 606

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A         +G  P +ITYT LI+ +C+      A ++  DM    C P++ TY+SL
Sbjct: 607 SEAEKICDKMAEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSL 666

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C++GK D+A +++  +  +G+ P+ +T+ +L+      G  D    +L  M +   
Sbjct: 667 IYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDVGC 726

Query: 359 SPTVFTYNILINGLCKYGLV--------DRAINSFN----------------QMVSKNCQ 394
            P   TY++L+ GL K  L+          A+ SF+                +M    C+
Sbjct: 727 KPNYRTYSVLLKGLQKECLLLEEKVAVQHEAVYSFSPHEKDVNFEIVSNLLARMSEIGCE 786

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P + TY+T++  LC++G   EA QL+  +      P    Y +L+    K   ++ A+ +
Sbjct: 787 PTLDTYSTLVSGLCRKGRFYEAEQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKI 846

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +  +   G       +R LI   C+A QVEEA  L   + ++        + +++ GL K
Sbjct: 847 FHSIEAKGFQLHLSIYRALICALCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLK 906

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             ++D+ +++L +M S  + P+   +  + ++++  G + E+  L  KL
Sbjct: 907 EGELDLCMKLLHIMESKNFTPNIQTYVILGRELSRIGKSIESEPLADKL 955



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 200/411 (48%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  L+  L + + +E A  + + M+ SG  P  +T+N ++  L K+G++R A  +L ++ 
Sbjct: 208 CNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIF 267

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
                PDV TY +++     N     A G +   +++GC P  +TY+ LI  +C +  + 
Sbjct: 268 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 327

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+++L++M  +G  P + TY   +   C     ++A+ ++  +  RG  PN  TY  L+
Sbjct: 328 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 387

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
             L   G  +    +   M +    P   TYN LIN LC  G    A+  F+ M      
Sbjct: 388 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSL 447

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            +  TYN ++  LC  G + +A+ L   +      P ++TYNTLI+G   KG +  A  L
Sbjct: 448 ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL 507

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              M ENG  PD+ T+  L+ GF +  ++E A    +E+ + G      +Y  +I G  K
Sbjct: 508 LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSK 567

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             KVD+A+ +LE M      P+   ++ ++  ++ +    EA K+  K+ E
Sbjct: 568 DGKVDIALSLLERMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMAE 618



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 206/416 (49%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P  H  I +I+     + I + +  L  +   G      + N ++  L K   +  A  L
Sbjct: 168 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 227

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
             +M  SG +P ++T+NT++  +   GK ++A        +    P + TYT LI   C+
Sbjct: 228 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 287

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A  V D M  EGC P+ VTY++L+N  C +G+ D+A+ ++  ++ +G+EP   T
Sbjct: 288 NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYT 347

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y   + +L +    +   +++  M +    P V TY  LI+GL + G ++ AI  +++M+
Sbjct: 348 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 407

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +   P+ VTYN ++  LC  G  + AL++ H + G        TYN +I GL   G +E
Sbjct: 408 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 467

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KAMVL+ +M++ G  P  +T+ TLI G+     V  A  LL  + + G +     Y  ++
Sbjct: 468 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 527

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            G  K  K++ A    + M+     P+   ++T++   + DG  + A  L +++ E
Sbjct: 528 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTTLIDGHSKDGKVDIALSLLERMEE 583


>gi|186510147|ref|NP_188293.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75274280|sp|Q9LUR2.1|PP238_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At3g16710, mitochondrial; Flags: Precursor
 gi|11994626|dbj|BAB02763.1| unnamed protein product [Arabidopsis thaliana]
 gi|332642334|gb|AEE75855.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 507

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 132/448 (29%), Positives = 224/448 (50%), Gaps = 8/448 (1%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIM 178
           KIL+N     +  DA  L   M     +P   DF   +++I  + R D +    + +QI+
Sbjct: 53  KILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112

Query: 179 VMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
               G+P  + T N+++  +C   Q   A   L +M   G EPD++T+ ++L       +
Sbjct: 113 ----GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNR 168

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            + AI  +   L  G  P ++TYT LI  +CK   +  A+E+ + M   G  P++VTYN+
Sbjct: 169 IEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNA 228

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           LV   C+ G++ DA  ++ +++ R +EPN IT+  L+ +    G      ++ ++M + S
Sbjct: 229 LVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMS 288

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P VFTY  LINGLC YGL+D A   F  M    C P+ V Y T++   CK   + + +
Sbjct: 289 VYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGM 348

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++ + ++        ITY  LI G    G  + A  ++ QM      PD  T+  L+ G 
Sbjct: 349 KIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGL 408

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C   +VE+A+ + + + KR   +    Y ++I G+CK  KV+ A  +   + S   KP+ 
Sbjct: 409 CCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNV 468

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             ++T++      G+  EA  L++K+ E
Sbjct: 469 ITYTTMISGFCRRGLIHEADSLFKKMKE 496



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 187/388 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   +   AS  +  M +    PD     +L+ G    +RIE A  +   +
Sbjct: 120 TCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQI 179

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+ +TY  ++  LCK   +  A+ L ++M  +G  P+V+TYN ++  + + G++
Sbjct: 180 LGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRW 239

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    +D +++   P +IT+T LI+   K   +  A E+ + M      PD+ TY SL
Sbjct: 240 GDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSL 299

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C  G  D+A  +   +   G  PN + Y TL+H        +   KI   M++   
Sbjct: 300 INGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGV 359

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TY +LI G C  G  D A   FNQM S+   PDI TYN +L  LC  G + +AL 
Sbjct: 360 VANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALM 419

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +        ++TY  +I G+ K G +E A  L+  +   G+ P+ IT+ T+I GFC
Sbjct: 420 IFEYMRKREMDINIVTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFC 479

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYR 506
           R   + EA  L K++ + G     S Y+
Sbjct: 480 RRGLIHEADSLFKKMKEDGFLPNESVYK 507



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 175/358 (48%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   +L  +C   ++ DA  L D +      P+      LIR L +   +  A +
Sbjct: 150 EPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVE 209

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M  +G  P+ +TYN +V GLC+ G+   A  LL +M     EP+VIT+  ++    
Sbjct: 210 LFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFV 269

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK  +A   +   ++    P + TY  LI  +C    +  A ++   M   GC P+ V
Sbjct: 270 KVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEV 329

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y +L++  CK  + +D + +   +  +G+  N+ITY  L+      G  D   ++ + M
Sbjct: 330 IYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQM 389

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +     P + TYN+L++GLC  G V++A+  F  M  +    +IVTY  ++  +CK G +
Sbjct: 390 SSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINIVTYTIIIQGMCKLGKV 449

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +A  L   L      P +ITY T+I G  ++G + +A  L+ +M E+G  P++  ++
Sbjct: 450 EDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKKMKEDGFLPNESVYK 507



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 94/378 (24%), Positives = 175/378 (46%), Gaps = 41/378 (10%)

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           +Y  ILR    N +F  A+  +   +     P +I +T L+  + K       I + + M
Sbjct: 50  SYRKILRNGLHNLQFNDALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQM 109

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
            I G  P + T N +++  C   +   A   +  ++  G EP+ +T+ +LL+       W
Sbjct: 110 QILGIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCH---W 166

Query: 344 DAVDKILDIMNE---ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           + ++  + + ++       P V TY  LI  LCK   ++ A+  FNQM +   +P++VTY
Sbjct: 167 NRIEDAIALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTY 226

Query: 401 NTVLGALC-----------------------------------KEGMLNEALQLLHLLNG 425
           N ++  LC                                   K G L EA +L +++  
Sbjct: 227 NALVTGLCEIGRWGDAAWLLRDMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQ 286

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
            S  P + TY +LI+GL   G +++A  ++  M  NG  P+++ + TLI GFC++ +VE+
Sbjct: 287 MSVYPDVFTYGSLINGLCMYGLLDEARQMFYLMERNGCYPNEVIYTTLIHGFCKSKRVED 346

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
            + +  E+ ++G       Y ++I G C   + D+A +V   M S R  PD   ++ ++ 
Sbjct: 347 GMKIFYEMSQKGVVANTITYTVLIQGYCLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLD 406

Query: 546 KVADDGMTEEAYKLWQKL 563
            +  +G  E+A  +++ +
Sbjct: 407 GLCCNGKVEKALMIFEYM 424



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 67/253 (26%), Positives = 121/253 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T   ++  F   GKL +A +L ++M + +  PD     +LI GL     +++A 
Sbjct: 254 IEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVYPDVFTYGSLINGLCMYGLLDEAR 313

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++  +M  +G  P+ + Y  ++ G CK  ++   + +  EMS  G   + ITY  +++  
Sbjct: 314 QMFYLMERNGCYPNEVIYTTLIHGFCKSKRVEDGMKIFYEMSQKGVVANTITYTVLIQGY 373

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A   +     +  PP + TY +L++ +C    + +A+ + + M       +I
Sbjct: 374 CLVGRPDVAQEVFNQMSSRRAPPDIRTYNVLLDGLCCNGKVEKALMIFEYMRKREMDINI 433

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  ++   CK GK +DA  +  +L S+GM+PN ITY T++     RG     D +   
Sbjct: 434 VTYTIIIQGMCKLGKVEDAFDLFCSLFSKGMKPNVITYTTMISGFCRRGLIHEADSLFKK 493

Query: 353 MNEASHSPTVFTY 365
           M E    P    Y
Sbjct: 494 MKEDGFLPNESVY 506



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 56/223 (25%), Positives = 104/223 (46%), Gaps = 3/223 (1%)

Query: 350 LDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           LD+     HS   P++  +  L++ + K    D  I+ F QM      P + T N V+  
Sbjct: 68  LDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQILGIPPLLCTCNIVMHC 127

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           +C       A   L  +      P L+T+ +L++G      +E A+ L+ Q++  G  P+
Sbjct: 128 VCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDAIALFDQILGMGFKPN 187

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+ TLI   C+   +  AV+L  ++G  G++     Y  ++ GLC+  +   A  +L 
Sbjct: 188 VVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTGLCEIGRWGDAAWLLR 247

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            M+  R +P+   F+ ++      G   EA +L+  +I+  V+
Sbjct: 248 DMMKRRIEPNVITFTALIDAFVKVGKLMEAKELYNVMIQMSVY 290



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/202 (23%), Positives = 98/202 (48%), Gaps = 1/202 (0%)

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           IL NGL      D A++ F +MV     P I+ +  +L  + K    +  + L   +   
Sbjct: 54  ILRNGLHNLQFND-ALDLFTRMVHSRPLPSIIDFTRLLSVIAKMNRYDVVISLFEQMQIL 112

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P L T N ++  +       +A    G+MM+ G  PD +T  +L+ G+C  +++E+A
Sbjct: 113 GIPPLLCTCNIVMHCVCLSSQPCRASCFLGKMMKLGFEPDLVTFTSLLNGYCHWNRIEDA 172

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + L  +I   G K     Y  +I  LCK++ ++ A+++   M ++  +P+   ++ +V  
Sbjct: 173 IALFDQILGMGFKPNVVTYTTLIRCLCKNRHLNHAVELFNQMGTNGSRPNVVTYNALVTG 232

Query: 547 VADDGMTEEAYKLWQKLIEWKV 568
           + + G   +A  L + +++ ++
Sbjct: 233 LCEIGRWGDAAWLLRDMMKRRI 254


>gi|6633829|gb|AAF19688.1|AC009519_22 F1N19.15 [Arabidopsis thaliana]
          Length = 1048

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 226/444 (50%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+   F    +  DA  L   M     +P       L+     + R E      Q M + 
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   D  ++ +++   C+  ++  A+++L +M   G EP ++T+ ++L       +   A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
                  ++ G  P ++ Y  LI+ +CK   +  A+E+L++M  +G   D+VTYN+L+  
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G++ DA  ++ +++ R + P+ +T+  L+     +G  D   ++   M ++S  P 
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TYN +INGLC +G +  A  +F+ M SK C P++VTYNT++   CK  M++E ++L  
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++    +  + TYNTLI G  + G +  A+ ++  M+   ++PD ITH  L+ G C   
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++E A+    ++ +    +   AY ++IHGLCK+ KV+ A ++   +     KPD   ++
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++  +  +G   EA +L +++ E
Sbjct: 461 IMILGLCKNGPRREADELIRRMKE 484



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 201/385 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  +   ++  FC   +L+ A  ++  M +    P      +L+ G   ++RI  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++ +MV SG  P+ + YN ++ GLCK G++  A+ LL+EM   G   DV+TYNT+L  +
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G++  A    +D +++   P ++T+T LI+   KQ  +  A E+  +M      P+ 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYNS++N  C  G+  DA    + + S+G  PN +TYNTL+         D   K+   
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+    +  +FTYN LI+G C+ G +  A++ F  MVS+   PDI+T+  +L  LC  G 
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +  AL     +  S     ++ YN +I GL K   +EKA  L+ ++   G+ PD  T+  
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           +I G C+     EA +L++ + + G
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEG 486



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/437 (27%), Positives = 216/437 (49%), Gaps = 6/437 (1%)

Query: 132  KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTI 188
            K  DA  L   M +   IP     ++  R L  I ++ K   V+ +   M   G   D  
Sbjct: 584  KFDDAFSLFCEMLQSRPIPSI---VDFTRVLTVIAKMNKFDIVIYLYHKMENLGISHDLY 640

Query: 189  TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
            ++ +++   C+  ++  A+ALL +M   G  P ++T  ++L       +F++A+      
Sbjct: 641  SFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSM 700

Query: 249  LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
               G  P ++ Y  +I  +CK   +  A+EV   M  +G   D VTYN+L++     G++
Sbjct: 701  DGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRW 760

Query: 309  DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             DA  ++ +++ R ++PN I +  L+ +    G       +   M   S  P VFTYN L
Sbjct: 761  TDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSL 820

Query: 369  INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
            ING C +G +  A   F+ MVSK C PD+VTYNT++   CK   + + ++L   +     
Sbjct: 821  INGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGL 880

Query: 429  SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
                 TYNTLI G  + G +  A  ++ +M++ G+SPD +T+  L+   C   ++E+A+ 
Sbjct: 881  VGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALV 940

Query: 489  LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
            +++++ K    +    Y ++I GLC++ K+  A  +   +     KPD   + T++  + 
Sbjct: 941  MVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLC 1000

Query: 549  DDGMTEEAYKLWQKLIE 565
              G+  EA KL +++ E
Sbjct: 1001 RKGLQREADKLCRRMKE 1017



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 107/342 (31%), Positives = 180/342 (52%), Gaps = 2/342 (0%)

Query: 157  NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
            +L+ G  + +R ++A  ++  M   G VP+ + YN ++ GLCK   + +A+ +   M   
Sbjct: 679  SLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKK 738

Query: 217  GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
            G   D +TYNT++  + ++G++  A    +D +++   P +I +T LI+   K+  +  A
Sbjct: 739  GIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEA 798

Query: 277  IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
              +  +M      P++ TYNSL+N  C  G   DA  + + ++S+G  P+ +TYNTL+  
Sbjct: 799  RNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITG 858

Query: 337  L-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               S+   D + K+   M         FTYN LI+G C+ G ++ A   FN+MV     P
Sbjct: 859  FCKSKRVEDGM-KLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSP 917

Query: 396  DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
            DIVTYN +L  LC  G + +AL ++  L  S     +ITYN +I GL +   +++A  L+
Sbjct: 918  DIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWCLF 977

Query: 456  GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
              +   G+ PD I + T+I G CR     EA  L + + + G
Sbjct: 978  RSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDG 1019



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 104/349 (29%), Positives = 168/349 (48%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T   +L  FC   +  +A  L+D M     +P+      +I GL +   +  A +V   M
Sbjct: 676  TLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCM 735

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
               G   D +TYN ++ GL   G+   A  LL +M     +P+VI +  ++ T    G  
Sbjct: 736  EKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 795

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             +A   +K+ +R+   P + TY  LI   C    +  A  + D M  +GC PD+VTYN+L
Sbjct: 796  LEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTL 855

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            +   CK  + +D + +   +  +G+  ++ TYNTL+H     G  +   K+ + M +   
Sbjct: 856  ITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 915

Query: 359  SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            SP + TYNIL++ LC  G +++A+     +       DI+TYN ++  LC+   L EA  
Sbjct: 916  SPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAWC 975

Query: 419  LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            L   L      P  I Y T+I GL +KG   +A  L  +M E+G  P +
Sbjct: 976  LFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1024



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 102/368 (27%), Positives = 181/368 (49%)

Query: 178  MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            M+  G  P  +T   ++ G C+  + + A++L+D M   G  P+V+ YNT++  +  N  
Sbjct: 665  MMKLGFRPSIVTLGSLLNGFCQGNRFQEAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRD 724

Query: 238  FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
               A+  +    +KG     +TY  LI  +        A  +L DM      P+++ + +
Sbjct: 725  LNNALEVFYCMEKKGIRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTA 784

Query: 298  LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
            L++   K+G   +A  +   ++ R + PN  TYN+L++     GC      + D+M    
Sbjct: 785  LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 844

Query: 358  HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
              P V TYN LI G CK   V+  +  F +M  +    D  TYNT++   C+ G LN A 
Sbjct: 845  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904

Query: 418  QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            ++ + +     SP ++TYN L+D L   G +EKA+V+   + ++ +  D IT+  +I G 
Sbjct: 905  KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964

Query: 478  CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            CR D+++EA  L + + ++G K    AY  +I GLC+      A ++   M    + P +
Sbjct: 965  CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1024

Query: 538  TVFSTIVK 545
             ++   ++
Sbjct: 1025 RIYDETLR 1032



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 119/501 (23%), Positives = 221/501 (44%), Gaps = 47/501 (9%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T N I+   C  G+L DA K  D+MA +   P+      LI G  +   +++  
Sbjct: 277 VDPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGM 336

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+ Q M   G   D  TYN ++ G C+ G++R A+ +   M      PD+IT+  +L  +
Sbjct: 337 KLFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGL 396

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG+ + A+  + D         ++ Y I+I  +CK   + +A E+   + +EG  PD 
Sbjct: 397 CVNGEIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDA 456

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRG-----------MEPNSITYNTLLHSLGSRG 341
            TY  ++   CK G   +A  +I  +   G           +E +S +   +  SL  R 
Sbjct: 457 RTYTIMILGLCKNGPRREADELIRRMKEEGIICQMNAEDDHLEEHSSSNKEI--SLSLRE 514

Query: 342 CWDA-------VDKILDIMNEASHSPTVFTYNILI--------------NGLCKYGL--- 377
            W+        + +++ I   +S    V  + +L+              +G   +     
Sbjct: 515 IWERSKSNPFWMQRLIPIAFSSSVKGFVRRHYLLLERGNNPETSLSRSFSGASHHHHYRE 574

Query: 378 ----------VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
                      D A + F +M+     P IV +  VL  + K    +  + L H +    
Sbjct: 575 RLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKMENLG 634

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            S  L ++  LI    +   +  A+ L G+MM+ G  P  +T  +L+ GFC+ ++ +EAV
Sbjct: 635 ISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQEAV 694

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L+  +   G       Y  VI+GLCK++ ++ A++V   M     + D   ++T++  +
Sbjct: 695 SLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLISGL 754

Query: 548 ADDGMTEEAYKLWQKLIEWKV 568
           ++ G   +A +L + +++ K+
Sbjct: 755 SNSGRWTDAARLLRDMVKRKI 775



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 170/345 (49%), Gaps = 1/345 (0%)

Query: 225 YNTILRTMFDNG-KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           Y   LRT F +  +F+ A   + + +     P ++ +T L+            I     M
Sbjct: 38  YREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM 97

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
            + G S D+ ++  L++  C+  +   A+ V+  ++  G EP+ +T+ +LLH        
Sbjct: 98  ELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRI 157

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
                ++ +M ++ + P V  YN LI+GLCK G ++ A+   N+M  K    D+VTYNT+
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           L  LC  G  ++A ++L  +   S +P ++T+  LID   K+G +++A  LY +M+++ +
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P+++T+ ++I G C   ++ +A      +  +G       Y  +I G CK + VD  ++
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + + M    +  D   ++T++      G    A  ++  ++  +V
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 95/374 (25%), Positives = 167/374 (44%), Gaps = 35/374 (9%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y   LR      KF  A   + + L+    P ++ +T ++  + K       I +   M 
Sbjct: 572 YRERLRNELHCIKFDDAFSLFCEMLQSRPIPSIVDFTRVLTVIAKMNKFDIVIYLYHKME 631

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             G S D+ ++  L++  C+  +   A+ ++  ++  G  P+ +T  +LL+       + 
Sbjct: 632 NLGISHDLYSFTILIHCFCRCSRLSLALALLGKMMKLGFRPSIVTLGSLLNGFCQGNRFQ 691

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               ++D M+     P V  YN +INGLCK   ++ A+  F  M  K  + D VTYNT++
Sbjct: 692 EAVSLVDSMDGFGFVPNVVIYNTVINGLCKNRDLNNALEVFYCMEKKGIRADAVTYNTLI 751

Query: 405 GAL-----------------------------------CKEGMLNEALQLLHLLNGSSCS 429
             L                                    KEG L EA  L   +   S  
Sbjct: 752 SGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEARNLYKEMIRRSVV 811

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P + TYN+LI+G    GC+  A  ++  M+  G  PD +T+ TLI GFC++ +VE+ + L
Sbjct: 812 PNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 871

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             E+  +G       Y  +IHG C++ K+++A +V   M+     PD   ++ ++  + +
Sbjct: 872 FCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDIVTYNILLDCLCN 931

Query: 550 DGMTEEAYKLWQKL 563
           +G  E+A  + + L
Sbjct: 932 NGKIEKALVMVEDL 945



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 141/307 (45%), Gaps = 35/307 (11%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            +  D  T N ++    + G+ TDA++L+  M +R   P+  F   LI   ++   + +A 
Sbjct: 740  IRADAVTYNTLISGLSNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAR 799

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             + + M+    VP+  TYN ++ G C  G +  A  + D M   GC PDV+TYNT++   
Sbjct: 800  NLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKGCFPDVVTYNTLITGF 859

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              + + +  +  + +   +G      TY  LI   C+   +  A +V + M   G SPDI
Sbjct: 860  CKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVSPDI 919

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            VTYN L++  C  GK + A++++ +L    M+ + IT                       
Sbjct: 920  VTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIIT----------------------- 956

Query: 353  MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
                        YNI+I GLC+   +  A   F  +  K  +PD + Y T++  LC++G+
Sbjct: 957  ------------YNIIIQGLCRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGL 1004

Query: 413  LNEALQL 419
              EA +L
Sbjct: 1005 QREADKL 1011



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 68/244 (27%), Positives = 118/244 (48%)

Query: 123  ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            ++  F   G L +A  L   M RR+ +P+     +LI G      +  A  +  +MV  G
Sbjct: 785  LIDTFVKEGNLLEARNLYKEMIRRSVVPNVFTYNSLINGFCIHGCLGDAKYMFDLMVSKG 844

Query: 183  GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              PD +TYN ++ G CK  ++   + L  EM+  G   D  TYNT++      GK   A 
Sbjct: 845  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTYQGLVGDAFTYNTLIHGYCQAGKLNVAQ 904

Query: 243  GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +   +  G  P ++TY IL++ +C    I +A+ +++D+       DI+TYN ++   
Sbjct: 905  KVFNRMVDCGVSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGL 964

Query: 303  CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            C+  K  +A  +  +L  +G++P++I Y T++  L  +G     DK+   M E    P+ 
Sbjct: 965  CRTDKLKEAWCLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSE 1024

Query: 363  FTYN 366
              Y+
Sbjct: 1025 RIYD 1028



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 4/300 (1%)

Query: 58  CRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSD--GPFVEN 115
           C+    N+ ++ +NE+++    ++  V+  N  L GL  + +  D +    D     +  
Sbjct: 187 CKNGELNIALELLNEMEKKGLGAD--VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  F  +G L +A +L   M + +  P+     ++I GL    R+  A K  
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M   G  P+ +TYN ++ G CK   +   + L   MS  G   D+ TYNT++      
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK + A+  +   + +   P +IT+ IL+  +C    I  A+   DDM        IV Y
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N +++  CK  K + A  +   L   G++P++ TY  ++  L   G     D+++  M E
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/121 (28%), Positives = 57/121 (47%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            V  D  T N +L   C+ GK+  A  +++ + +     D      +I+GL R D++++A 
Sbjct: 915  VSPDIVTYNILLDCLCNNGKIEKALVMVEDLQKSEMDVDIITYNIIIQGLCRTDKLKEAW 974

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             + + +   G  PD I Y  M+ GLC++G  R A  L   M   G  P    Y+  LR  
Sbjct: 975  CLFRSLTRKGVKPDAIAYITMISGLCRKGLQREADKLCRRMKEDGFMPSERIYDETLRDH 1034

Query: 233  F 233
            +
Sbjct: 1035 Y 1035


>gi|115487378|ref|NP_001066176.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|77553036|gb|ABA95832.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113648683|dbj|BAF29195.1| Os12g0152600 [Oryza sativa Japonica Group]
 gi|125535802|gb|EAY82290.1| hypothetical protein OsI_37500 [Oryza sativa Indica Group]
 gi|125578525|gb|EAZ19671.1| hypothetical protein OsJ_35247 [Oryza sativa Japonica Group]
          Length = 716

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 213/446 (47%), Gaps = 2/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++     +G+L  A++L+D M    +   F F   LI G      +EKA  +   M
Sbjct: 270 TYNVVINGLARKGELEKAAQLVDRMRMSKKASAFTFN-PLITGYFARGSVEKAGALQLEM 328

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VP  +TYN ++ G+ + G + +A     EM   G  PD+ITYN+++      G  
Sbjct: 329 ENEGIVPTVVTYNTIIHGMFRSGNVEAARMKFVEMRAMGLLPDLITYNSLINGYCKAGNL 388

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A+  + D  R G  P ++TY IL++  C+   +  A     +M  +GC PD+ TY  L
Sbjct: 389 KEALWLFGDLKRAGLAPSVLTYNILLDGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTIL 448

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N S K           + +LS+G++P+   YNT + +    G      ++ ++M     
Sbjct: 449 MNGSRKVRNLAMVREFFDEMLSKGLQPDCFAYNTRISAELILGSTSEAFQLTEVMISRGI 508

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S    TYNI ++GLCK G +  A   + +MVS   QPD +TY  ++ A C+ G L EA  
Sbjct: 509 SSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPDCITYTCLIHAHCERGRLREARD 568

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +  S   P  +TY   I    ++G +  A   + +M+E G+ P+++T+  LI   C
Sbjct: 569 IFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALC 628

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  +   A     E+ +RG       Y L+I G CK    + AI++   M      PD  
Sbjct: 629 RMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIHPDHC 688

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
             + + K   D+G ++ A +  + ++
Sbjct: 689 THNALFKGF-DEGQSKHAIQYMENVV 713



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/411 (28%), Positives = 204/411 (49%), Gaps = 3/411 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
            L+    R  R+++A+K+L+ M    G  +P  +TYN+++ GL ++G++  A  L+D M 
Sbjct: 236 TLLDSFFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDRMR 295

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           +S  +    T+N ++   F  G  ++A     +   +G  P ++TY  +I  + +   + 
Sbjct: 296 MSK-KASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVE 354

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A     +M   G  PD++TYNSL+N  CK G   +A+ +  +L   G+ P+ +TYN LL
Sbjct: 355 AARMKFVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILL 414

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                 G  +   +    M E    P V TY IL+NG  K   +      F++M+SK  Q
Sbjct: 415 DGYCRLGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQ 474

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD   YNT + A    G  +EA QL  ++     S   +TYN  +DGL K G ++ A VL
Sbjct: 475 PDCFAYNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVL 534

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M+ +G+ PD IT+  LI   C   ++ EA D+   +   G       Y + IH  C+
Sbjct: 535 WMKMVSDGLQPDCITYTCLIHAHCERGRLREARDIFDGMLVSGLPPSAVTYTVFIHAYCR 594

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +  A    + M+    +P++  ++ ++  +   G T  AY+ + +++E
Sbjct: 595 RGNLYSAYGWFQKMLEEGVRPNEVTYNVLIHALCRMGRTNLAYQHFHEMLE 645



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/360 (26%), Positives = 176/360 (48%), Gaps = 3/360 (0%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           +A   EM+  G  P +   N +LR + D  ++      + + L+ G  P ++TY  L++ 
Sbjct: 181 LAAFREMAHHGVPPFIKECNLVLRALRDEARWDDMRSVYAEMLQLGIEPSIVTYNTLLDS 240

Query: 267 VCKQCGIARAIEVLDDMAIE--GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             ++  + +A ++L +M     GC P  VTYN ++N   ++G+ + A  +++  +    +
Sbjct: 241 FFREGRVDQAAKLLREMEARPGGCLPSDVTYNVVINGLARKGELEKAAQLVDR-MRMSKK 299

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            ++ T+N L+    +RG  +    +   M      PTV TYN +I+G+ + G V+ A   
Sbjct: 300 ASAFTFNPLITGYFARGSVEKAGALQLEMENEGIVPTVVTYNTIIHGMFRSGNVEAARMK 359

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F +M +    PD++TYN+++   CK G L EAL L   L  +  +P ++TYN L+DG  +
Sbjct: 360 FVEMRAMGLLPDLITYNSLINGYCKAGNLKEALWLFGDLKRAGLAPSVLTYNILLDGYCR 419

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G +E+A     +M+E G  PD  T+  L+ G  +   +    +   E+  +G +    A
Sbjct: 420 LGDLEEARRFKQEMVEQGCQPDVSTYTILMNGSRKVRNLAMVREFFDEMLSKGLQPDCFA 479

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y   I           A Q+ E+MIS     D   ++  +  +   G  ++AY LW K++
Sbjct: 480 YNTRISAELILGSTSEAFQLTEVMISRGISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMV 539



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/210 (28%), Positives = 95/210 (45%), Gaps = 7/210 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN---LIRGLIRIDRIE 169
           + +D  T N  L   C  G L DA  L   M      PD   CI    LI       R+ 
Sbjct: 508 ISSDTVTYNIFLDGLCKSGNLKDAYVLWMKMVSDGLQPD---CITYTCLIHAHCERGRLR 564

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A  +   M++SG  P  +TY + +   C+RG + SA     +M   G  P+ +TYN ++
Sbjct: 565 EARDIFDGMLVSGLPPSAVTYTVFIHAYCRRGNLYSAYGWFQKMLEEGVRPNEVTYNVLI 624

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G+   A   + + L +G  P   TYT+LI+  CK+     AI +  +M   G  
Sbjct: 625 HALCRMGRTNLAYQHFHEMLERGLSPNKYTYTLLIDGNCKEGNWEEAIRLYSEMHQHGIH 684

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           PD  T+N+L      +G+   A+  + N++
Sbjct: 685 PDHCTHNALFK-GFDEGQSKHAIQYMENVV 713


>gi|356529489|ref|XP_003533323.1| PREDICTED: pentatricopeptide repeat-containing protein At1g12300,
           mitochondrial-like [Glycine max]
          Length = 550

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 122/402 (30%), Positives = 213/402 (52%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           +C  G +  A  ++ ++ +R    +      +++GL     + KA +    +V  G + D
Sbjct: 123 YCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLD 182

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            +TY  ++ GLCK G  R A  LL +M      P+V+ YN I+  +  +G   +A   + 
Sbjct: 183 EVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYS 242

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           D + +G  P + TYT LI   C          +L DM     + ++ TYN L++  CK+G
Sbjct: 243 DVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKG 302

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
               A  + N ++ RG  P+ +T+NTL+             K+ D   E   +P V++YN
Sbjct: 303 MLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYN 362

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           ILI G CK   +D A++ FN+M  K   P+IVTY++++  LCK G ++ A +L   ++  
Sbjct: 363 ILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDG 422

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
             SP +ITYN ++D L K   ++KA+ L+  M E G++P+  ++  LI G+C++ +++EA
Sbjct: 423 GPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEA 482

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           ++L +E+ +R     +  Y  +I GLCKS ++  A ++  +M
Sbjct: 483 MNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVM 524



 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 134/507 (26%), Positives = 246/507 (48%), Gaps = 40/507 (7%)

Query: 91  LRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           L   T T+  +  S  S    F  + +K N K    F     + DA  L   +   + +P
Sbjct: 20  LYAATTTRLRYAISKFSVFLRFFSDSQKQNAKKKSGF---DAIDDAVALFTRLITMHPLP 76

Query: 151 DFHFCINLIRG-LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
                 N+I G ++++     A  + + M + G  P  +T ++++   C  G +  A ++
Sbjct: 77  SV-VEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVTLSILINCYCHLGHMGFAFSV 135

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L  +   G + + IT  TI++ +  NG+ ++A+ F    + +G     +TY  LI  +CK
Sbjct: 136 LGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVVAQGFLLDEVTYGTLINGLCK 195

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
                 A E+L  M  +   P++V YN +V+  CK G   +A  + ++++ RG++P+  T
Sbjct: 196 IGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFT 255

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y  L+H     G W  V ++L  M + + +  V+TYNILI+ LCK G++ +A +  N M+
Sbjct: 256 YTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMI 315

Query: 390 SKNCQPDIVTYNTVLGALC-----------------------------------KEGMLN 414
            +  +PD+VT+NT++   C                                   K   ++
Sbjct: 316 ERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRID 375

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EAL L + +N    +P ++TY++LIDGL K G +  A  L+  + + G SP+ IT+  ++
Sbjct: 376 EALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIML 435

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              C+   V++A++L   + +RG     S+Y ++I+G CKSK++D A+ + E M      
Sbjct: 436 DALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLV 495

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           PD   ++ ++  +   G    A++L+ 
Sbjct: 496 PDSVTYNCLIDGLCKSGRISHAWELFN 522



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 106/368 (28%), Positives = 178/368 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T   ++   C  G   +A +L+  M  +   P+      ++ GL +   + +A  + 
Sbjct: 182 DEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLY 241

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +V  G  PD  TY  ++ G C  GQ R    LL +M       +V TYN ++  +   
Sbjct: 242 SDVVGRGIDPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKK 301

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A       + +G  P L+T+  L+   C    +  A ++ D  A  G +PD+ +Y
Sbjct: 302 GMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSY 361

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+   CK  + D+A+ + N +  + + PN +TY++L+  L   G      ++   +++
Sbjct: 362 NILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHD 421

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SP V TYNI+++ LCK  LVD+AI  FN M  +   P++ +YN ++   CK   ++E
Sbjct: 422 GGPSPNVITYNIMLDALCKIQLVDKAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDE 481

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ L   ++  +  P  +TYN LIDGL K G +  A  L+  M + G   D IT+  L  
Sbjct: 482 AMNLFEEMHRRNLVPDSVTYNCLIDGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFD 541

Query: 476 GFCRADQV 483
            F +   V
Sbjct: 542 AFSKIQHV 549



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 107/411 (26%), Positives = 201/411 (48%), Gaps = 7/411 (1%)

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
            D I+ A  +   ++    +P  + +NM++G + K     +AI+L  +M + G  P ++T
Sbjct: 56  FDAIDDAVALFTRLITMHPLPSVVEFNMILGSIVKMKHYPTAISLSKQMGLRGITPSIVT 115

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
            + ++      G    A       L++G     IT T +++ +C    + +A+E  D + 
Sbjct: 116 LSILINCYCHLGHMGFAFSVLGMVLKRGYQLNAITLTTIMKGLCINGEVRKALEFHDSVV 175

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CW 343
            +G   D VTY +L+N  CK G   +A  +++ +  + + PN + YN ++  L   G   
Sbjct: 176 AQGFLLDEVTYGTLINGLCKIGLTREAFELLHKMEGQVVRPNVVIYNMIVDGLCKDGLVT 235

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           +A D   D++      P VFTY  LI+G C  G           MV +N   ++ TYN +
Sbjct: 236 EARDLYSDVVGRGI-DPDVFTYTCLIHGFCGLGQWREVTRLLCDMVDRNVNLNVYTYNIL 294

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + ALCK+GML +A  + +L+      P L+T+NTL+ G      + +A  L+    E GI
Sbjct: 295 IDALCKKGMLGKAHDMRNLMIERGQRPDLVTFNTLMSGYCLYNDVVEARKLFDTFAECGI 354

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           +PD  ++  LI G+C+ ++++EA+ L  ++  +        Y  +I GLCKS ++  A +
Sbjct: 355 TPDVWSYNILIIGYCKNNRIDEALSLFNKMNYKKLAPNIVTYSSLIDGLCKSGRISYAWE 414

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +   +      P+   ++ ++  +    + ++A +L+  +     FE+G T
Sbjct: 415 LFSAIHDGGPSPNVITYNIMLDALCKIQLVDKAIELFNLM-----FERGLT 460



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 105/340 (30%), Positives = 170/340 (50%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L   +G  V  +    N I+   C  G +T+A  L   +  R   PD      LI G   
Sbjct: 206 LHKMEGQVVRPNVVIYNMIVDGLCKDGLVTEARDLYSDVVGRGIDPDVFTYTCLIHGFCG 265

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           + +  + +++L  MV      +  TYN+++  LCK+G +  A  + + M   G  PD++T
Sbjct: 266 LGQWREVTRLLCDMVDRNVNLNVYTYNILIDALCKKGMLGKAHDMRNLMIERGQRPDLVT 325

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           +NT++          +A   +      G  P + +Y ILI   CK   I  A+ + + M 
Sbjct: 326 FNTLMSGYCLYNDVVEARKLFDTFAECGITPDVWSYNILIIGYCKNNRIDEALSLFNKMN 385

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +  +P+IVTY+SL++  CK G+   A  + + +   G  PN ITYN +L +L      D
Sbjct: 386 YKKLAPNIVTYSSLIDGLCKSGRISYAWELFSAIHDGGPSPNVITYNIMLDALCKIQLVD 445

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
              ++ ++M E   +P V +YNILING CK   +D A+N F +M  +N  PD VTYN ++
Sbjct: 446 KAIELFNLMFERGLTPNVSSYNILINGYCKSKRIDEAMNLFEEMHRRNLVPDSVTYNCLI 505

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             LCK G ++ A +L ++++       +ITYN L D  +K
Sbjct: 506 DGLCKSGRISHAWELFNVMHDGGPPVDVITYNILFDAFSK 545


>gi|357125910|ref|XP_003564632.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 1 [Brachypodium distachyon]
 gi|357125912|ref|XP_003564633.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like isoform 2 [Brachypodium distachyon]
          Length = 704

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 126/450 (28%), Positives = 232/450 (51%), Gaps = 3/450 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T N +L++ C RG L  A  L D +  R   PD      L+ G ++ +R++ A  +L  
Sbjct: 160 QTYNIMLRSLCVRGDLDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDE 219

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNG 236
           M      PD + YN ++GG  + G+   A+ + +++    G  P++ TYN +L  +   G
Sbjct: 220 MPSYEVQPDAVCYNALLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLG 279

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
            FK+A   W+  +     P +ITY  +I  +C+   +  A  V  +M   G  PD+V YN
Sbjct: 280 MFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYN 339

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN-E 355
           SL+   C  G+  +A    +++   G+  N  +YN +L  L   G  D    + +++  +
Sbjct: 340 SLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELLEKD 398

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            S SP + T++ +I+GLC+ G  ++++    +  +   + D  +Y++++  LCK+G L++
Sbjct: 399 DSLSPDMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDD 458

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A++L   ++  S  P    YN LI+G  +      A+ +Y QM EN  SP  IT+ TLI 
Sbjct: 459 AVKLYEKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIH 518

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+A++  EA    +E+ ++G  +  + Y  +I GLC+ KK+D A+ +   ++    + 
Sbjct: 519 GLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQT 578

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D  + + ++  +   G  +EA +L  ++ E
Sbjct: 579 DVVMHNILIHGLCSAGKVDEASQLLSEMKE 608



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 231/455 (50%), Gaps = 8/455 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKV 174
           D  T + ++  F    +L +A  L+D M      PD   C N L+ G  R    EKA +V
Sbjct: 193 DRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPD-AVCYNALLGGCFRNGEFEKAMRV 251

Query: 175 LQIMVM-SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            + +V   G  P+  TYN+M+ GLCK G  + A  + + M  +  +PD+ITY T++  + 
Sbjct: 252 WEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLC 311

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +     A   + + ++ G  P ++ Y  L++  C    +  A +  D M++ G   ++ 
Sbjct: 312 RSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVT 370

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSR--GMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +YN ++      G  D A   +  LL +   + P+ +T++T++H L  +G  +   +IL+
Sbjct: 371 SYNIMLKGLFDGGMVDKAT-DLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILE 429

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
               +      F+Y+ +I+GLCK G +D A+  + ++   + +P+   YN ++   C+  
Sbjct: 430 EARTSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQAS 489

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             ++A+++   +  + CSP  ITYNTLI GL K     +A     +M+E G   D  T+ 
Sbjct: 490 KFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYG 549

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL-ELMIS 530
           +LI G CR  +++ A+ L  +I  +G +     + ++IHGLC + KVD A Q+L E+   
Sbjct: 550 SLIRGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEK 609

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +   P+   ++T++    + G  ++A  LW  ++E
Sbjct: 610 NNCCPNVVTYNTLMDGFYETGCFDKAASLWMAILE 644



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 217/465 (46%), Gaps = 36/465 (7%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           P    +  T N +L   C  G   +A  + + M   N  PD      +I GL R   ++ 
Sbjct: 259 PGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVANNHQPDMITYGTMIHGLCRSTDVDS 318

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A++V   M+ +G VPD + YN ++ G C  G++  A    D MSVSG   +V +YN +L+
Sbjct: 319 AARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEAWKFWDSMSVSGIR-NVTSYNIMLK 377

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +FD G   +A   W+                L+E+              DD      SP
Sbjct: 378 GLFDGGMVDKATDLWE----------------LLEK--------------DD----SLSP 403

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+VT++++++  C++G  + ++ ++    + G E +  +Y++++  L   G  D   K+ 
Sbjct: 404 DMVTFSTMIHGLCEKGFANKSLQILEEARTSGKELDEFSYSSMISGLCKDGRLDDAVKLY 463

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           + ++  S  P    YN LING C+      AI  ++QM   +C P  +TYNT++  LCK 
Sbjct: 464 EKISMDSFKPNSHIYNALINGFCQASKFSDAIRVYSQMAENDCSPTTITYNTLIHGLCKA 523

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
               EA +    +    C   + TY +LI GL +   ++ A+ L+ Q+++ G+  D + H
Sbjct: 524 EKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDVVMH 583

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKSKKVDMAIQVLELMI 529
             LI G C A +V+EA  LL E+ ++ N   N   Y  ++ G  ++   D A  +   ++
Sbjct: 584 NILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWMAIL 643

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            +   PD   ++T +K +     T E  +L  +++   +     T
Sbjct: 644 ENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAIT 688



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 97/331 (29%), Positives = 166/331 (50%), Gaps = 2/331 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +L+     G +  A+ L +++ + + + PD      +I GL       K+ ++L+   
Sbjct: 373 NIMLKGLFDGGMVDKATDLWELLEKDDSLSPDMVTFSTMIHGLCEKGFANKSLQILEEAR 432

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            SG   D  +Y+ M+ GLCK G++  A+ L +++S+   +P+   YN ++       KF 
Sbjct: 433 TSGKELDEFSYSSMISGLCKDGRLDDAVKLYEKISMDSFKPNSHIYNALINGFCQASKFS 492

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            AI  +       C P  ITY  LI  +CK      A     +M  +GC  D+ TY SL+
Sbjct: 493 DAIRVYSQMAENDCSPTTITYNTLIHGLCKAEKYLEASRFTREMLEKGCMLDVNTYGSLI 552

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C+  K D A+ + N +L +G++ + + +N L+H L S G  D   ++L  M E ++ 
Sbjct: 553 RGLCRDKKIDGALALWNQILDKGLQTDVVMHNILIHGLCSAGKVDEASQLLSEMKEKNNC 612

Query: 360 -PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TYN L++G  + G  D+A + +  ++     PDI++YNT +  LC      E +Q
Sbjct: 613 CPNVVTYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQ 672

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           LL+ +  S   P  IT+N L+  + K G ++
Sbjct: 673 LLNEMLASGIIPTAITWNILVRAVIKYGPIQ 703



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 86/282 (30%), Positives = 146/282 (51%), Gaps = 6/282 (2%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL----LSRGMEPNSITYNTLLHSLGSRGC 342
           GC+P + ++N+L++   +  ++ DA     +L      R + PN  TYN +L SL  RG 
Sbjct: 115 GCNPGVRSHNALLDAFVRARRFSDADAFFASLSHGAFGRRIAPNLQTYNIMLRSLCVRGD 174

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            D    + D +     +P   TY+ L++G  K   +D A+   ++M S   QPD V YN 
Sbjct: 175 LDRAVTLFDSLRCRGLAPDRITYSTLMSGFVKNNRLDNALYLLDEMPSYEVQPDAVCYNA 234

Query: 403 VLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           +LG   + G   +A+++   L+     SP L TYN ++DGL K G  ++A  ++ +M+ N
Sbjct: 235 LLGGCFRNGEFEKAMRVWEQLVRDPGASPNLATYNVMLDGLCKLGMFKEAGDVWERMVAN 294

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
              PD IT+ T+I G CR+  V+ A  +  E+ K G       Y  ++ G C + +V  A
Sbjct: 295 NHQPDMITYGTMIHGLCRSTDVDSAARVYSEMIKTGLVPDVVIYNSLLKGFCHAGRVGEA 354

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +  + M  S  + + T ++ ++K + D GM ++A  LW+ L
Sbjct: 355 WKFWDSMSVSGIR-NVTSYNIMLKGLFDGGMVDKATDLWELL 395



 Score = 97.8 bits (242), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 67/240 (27%), Positives = 111/240 (46%), Gaps = 9/240 (3%)

Query: 72  EVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVEND----EKTNNKILQNF 127
           ++  D +   SH+   N  + G     K  D     S     END      T N ++   
Sbjct: 465 KISMDSFKPNSHI--YNALINGFCQASKFSDAIRVYSQ--MAENDCSPTTITYNTLIHGL 520

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C   K  +AS+    M  +  + D +   +LIRGL R  +I+ A  +   ++  G   D 
Sbjct: 521 CKAEKYLEASRFTREMLEKGCMLDVNTYGSLIRGLCRDKKIDGALALWNQILDKGLQTDV 580

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           + +N+++ GLC  G++  A  LL EM   + C P+V+TYNT++   ++ G F +A   W 
Sbjct: 581 VMHNILIHGLCSAGKVDEASQLLSEMKEKNNCCPNVVTYNTLMDGFYETGCFDKAASLWM 640

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             L  G  P +I+Y   I+ +C        +++L++M   G  P  +T+N LV    K G
Sbjct: 641 AILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEMLASGIIPTAITWNILVRAVIKYG 700



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 24/86 (27%), Positives = 41/86 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  F   G    A+ L   +     +PD       I+GL   +R  +  ++L  M
Sbjct: 618 TYNTLMDGFYETGCFDKAASLWMAILENGLVPDIISYNTRIKGLCSCNRTPEGVQLLNEM 677

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIR 204
           + SG +P  IT+N++V  + K G I+
Sbjct: 678 LASGIIPTAITWNILVRAVIKYGPIQ 703


>gi|42408236|dbj|BAD09393.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|125601932|gb|EAZ41257.1| hypothetical protein OsJ_25765 [Oryza sativa Japonica Group]
          Length = 798

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 129/449 (28%), Positives = 219/449 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N I+        +  A+ ++  M +   +P+     +L+ G     +   A  V 
Sbjct: 237 DVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVF 296

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD  TYN ++G LCK G+   A  + D M   G +P+  TY T+L      
Sbjct: 297 KRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATE 356

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +        +R G  P    + ILI    K   +  A+ +   M  +G +PD VTY
Sbjct: 357 GSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTY 416

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             +++  C  GK DDA+     L+S G+ P+++ +  L+H L +R  WD  +++   M  
Sbjct: 417 GIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIG 476

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    +N L+N LCK G+V RA N F+ MV  + Q D++TYNT++   C  G ++E
Sbjct: 477 RGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDE 536

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +LL  +      P  +TYNT+I+G  K G +E A  L+ QM   G++P  +T+ T++ 
Sbjct: 537 AAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQ 596

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G  +A +   A +L   + K G K     Y +++ GLC++   D A+++ + +    +  
Sbjct: 597 GLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHL 656

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           ++  F+ ++  +   G  +EA  L+  L+
Sbjct: 657 ENRTFNIMIDALLKGGRHDEAKDLFASLL 685



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 145/501 (28%), Positives = 244/501 (48%), Gaps = 49/501 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI----PDFHFCINLIRGLIRIDRIEKASKV 174
           T + +L+  C + + ++A   +DI  RR  +    P+      L++GL   +R ++A  +
Sbjct: 128 TFSPLLKALCDKKRTSEA---MDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHL 184

Query: 175 LQIMVMS-----GGVPDTITYNMMVGGLCKRG-QIRSAIALLDEMSVSGCEPDVITYNTI 228
           L  M+++     G  PD ++YN ++ GL + G Q+ +A  L D+M   G  PDV+TYN+I
Sbjct: 185 LHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSI 244

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +       +A       ++ G  P  IT+  L+   C       AI V   M  +G 
Sbjct: 245 ISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGV 304

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD+ TYN+L+ + CK G+  +A  + ++++ RG +PNS TY TLLH   + G    +  
Sbjct: 305 EPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHH 364

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +LD+M      P  + +NILI    K+G VD A+  F++M  +   PD VTY  V+ ALC
Sbjct: 365 LLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALC 424

Query: 409 KEGMLNEAL-------------------QLLHLL----------------NGSSCSPCLI 433
             G +++A+                    L+H L                 G    P  I
Sbjct: 425 MVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNI 484

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            +NTL++ L K+G + +A  ++  M+   +  D IT+ TLI G+C   +V+EA  LL+ +
Sbjct: 485 FFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGM 544

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
              G K     Y  +I+G CK+ +++ A  +   M S    P    +STI++ +     T
Sbjct: 545 VLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRT 604

Query: 554 EEAYKLWQKLIEWKV-FEKGT 573
             A +L+  +I+  + F+ GT
Sbjct: 605 AAAKELYLWMIKSGIKFDIGT 625



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 123/434 (28%), Positives = 213/434 (49%), Gaps = 2/434 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRG-LIRIDRIEKASKVLQI 177
           T+N +L  +CS GK  DA  +   M R    PD  F  N + G L +  R  +A K+   
Sbjct: 275 THNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDV-FTYNTLMGYLCKNGRSMEARKIFDS 333

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV  G  P++ TY  ++ G    G +     LLD M  +G +PD   +N ++ T   +GK
Sbjct: 334 MVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGK 393

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A+  +    R+G  P  +TY I+++ +C    +  A+     +  EG +PD V + +
Sbjct: 394 VDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRN 453

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C + K+D A  +   ++ RG+ PN+I +NTLL+ L   G       I D+M    
Sbjct: 454 LIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVD 513

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
               V TYN LI+G C +G VD A      MV    +P+ VTYNT++   CK G + +A 
Sbjct: 514 VQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNEVTYNTMINGYCKNGRIEDAF 573

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            L   +     +P ++TY+T++ GL +      A  LY  M+++GI  D  T+  ++ G 
Sbjct: 574 SLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLWMIKSGIKFDIGTYNIILLGL 633

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+ +  ++A+ + + +      + N  + ++I  L K  + D A  +   +++    P+ 
Sbjct: 634 CQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGRHDEAKDLFASLLARGLVPNV 693

Query: 538 TVFSTIVKKVADDG 551
             +  ++K + + G
Sbjct: 694 VTYWLMMKSLIEQG 707



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/412 (28%), Positives = 204/412 (49%), Gaps = 7/412 (1%)

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL-LDEMSVSGCEPDV 222
           R+  ++ A   L  ++ SG   + IT++ ++  LC + +   A+ + L  M V GC P+V
Sbjct: 103 RVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLGCTPNV 162

Query: 223 ITYNTILRTMFDNGKFKQAIGFWK-----DQLRKGCPPYLITYTILIEQVCKQC-GIARA 276
            +Y  +L+ + D  + +QA+         D  R G PP +++Y  +I  + ++   +  A
Sbjct: 163 FSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGRQLDTA 222

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             + D M  +G SPD+VTYNS+++   K    D A +V+  ++  G  PN IT+N+LLH 
Sbjct: 223 YHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNGAMPNRITHNSLLHG 282

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
             S G  +    +   M      P VFTYN L+  LCK G    A   F+ MV +  +P+
Sbjct: 283 YCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPN 342

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             TY T+L     EG L +   LL ++  +   P    +N LI    K G ++ AM+L+ 
Sbjct: 343 SATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFS 402

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M   G++PD +T+  ++   C   +V++A+     +   G       +R +IHGLC   
Sbjct: 403 KMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARD 462

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           K D A ++   MI     P++  F+T++  +  +GM   A  ++  ++   V
Sbjct: 463 KWDKAEELAVEMIGRGICPNNIFFNTLLNHLCKEGMVARAKNIFDLMVRVDV 514



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/390 (28%), Positives = 198/390 (50%), Gaps = 13/390 (3%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+ ITY++++    + G +  A A L  +  SG   + IT++ +L+ + D  +  +A+  
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148

Query: 245 WKDQLRK----GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-----GCSPDIVTY 295
               LR+    GC P + +YTIL++ +C +    +A+ +L  M +      G  PD+V+Y
Sbjct: 149 ---ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSY 205

Query: 296 NSLVNFSCKQGK-YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           N+++N   ++G+  D A  + + +L +G+ P+ +TYN+++ +L      D    +L  M 
Sbjct: 206 NTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMV 265

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P   T+N L++G C  G  + AI  F +M     +PD+ TYNT++G LCK G   
Sbjct: 266 KNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSM 325

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA ++   +      P   TY TL+ G A +G + K   L   M+ NGI PD      LI
Sbjct: 326 EARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNILI 385

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             + +  +V++A+ L  ++ ++G       Y +V+  LC   KVD A+     +IS    
Sbjct: 386 GTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAMAQFGRLISEGLT 445

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           PD  VF  ++  +      ++A +L  ++I
Sbjct: 446 PDAVVFRNLIHGLCARDKWDKAEELAVEMI 475



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 183/385 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N ++   C  G+  +A K+ D M +R   P+      L+ G      + K  
Sbjct: 304 VEPDVFTYNTLMGYLCKNGRSMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMH 363

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L +MV +G  PD   +N+++G   K G++  A+ L  +M   G  PD +TY  ++  +
Sbjct: 364 HLLDMMVRNGIQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDAL 423

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK   A+  +   + +G  P  + +  LI  +C +    +A E+  +M   G  P+ 
Sbjct: 424 CMVGKVDDAMAQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNN 483

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + +N+L+N  CK+G    A  + + ++   ++ + ITYNTL+      G  D   K+L+ 
Sbjct: 484 IFFNTLLNHLCKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEG 543

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P   TYN +ING CK G ++ A + F QM SK   P IVTY+T+L  L +   
Sbjct: 544 MVLDGVKPNEVTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARR 603

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
              A +L   +  S     + TYN ++ GL +  C + A+ ++  +       ++ T   
Sbjct: 604 TAAAKELYLWMIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNI 663

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           +I    +  + +EA DL   +  RG
Sbjct: 664 MIDALLKGGRHDEAKDLFASLLARG 688



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 110/424 (25%), Positives = 197/424 (46%), Gaps = 7/424 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    N ++  +   GK+ DA  L   M R+   PD      ++  L  + +++ A 
Sbjct: 374 IQPDHYIFNILIGTYTKHGKVDDAMLLFSKMRRQGLNPDTVTYGIVMDALCMVGKVDDAM 433

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                ++  G  PD + +  ++ GLC R +   A  L  EM   G  P+ I +NT+L  +
Sbjct: 434 AQFGRLISEGLTPDAVVFRNLIHGLCARDKWDKAEELAVEMIGRGICPNNIFFNTLLNHL 493

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A   +   +R      +ITY  LI+  C    +  A ++L+ M ++G  P+ 
Sbjct: 494 CKEGMVARAKNIFDLMVRVDVQRDVITYNTLIDGYCLHGKVDEAAKLLEGMVLDGVKPNE 553

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+++N  CK G+ +DA  +   + S+G+ P  +TY+T+L  L       A  ++   
Sbjct: 554 VTYNTMINGYCKNGRIEDAFSLFRQMASKGVNPGIVTYSTILQGLFQARRTAAAKELYLW 613

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M ++     + TYNI++ GLC+    D A+  F  +   +   +  T+N ++ AL K G 
Sbjct: 614 MIKSGIKFDIGTYNIILLGLCQNNCTDDALRIFQNLYLIDFHLENRTFNIMIDALLKGGR 673

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            +EA  L   L      P ++TY  ++  L ++G +E+   L+  + +NG + +      
Sbjct: 674 HDEAKDLFASLLARGLVPNVVTYWLMMKSLIEQGLLEELDDLFLSLEKNGCTANSRMLNA 733

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISS 531
           L+    +  +V +A   L +I +    +  S A  LV+  L  S K D  I      I  
Sbjct: 734 LVGKLLQKGEVRKAGVYLSKIDENNFSLEASTAESLVL--LVSSGKYDQHINA----IPE 787

Query: 532 RYKP 535
           +Y+P
Sbjct: 788 KYRP 791



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/321 (25%), Positives = 159/321 (49%), Gaps = 7/321 (2%)

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R   PP LITY+++I+   +   +  A   L  +   G + + +T++ L+   C + +  
Sbjct: 84  RPKVPPNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTS 143

Query: 310 DAV-LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM-----NEASHSPTVF 363
           +A+ + +  +   G  PN  +Y  LL  L           +L  M         + P V 
Sbjct: 144 EAMDIALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVV 203

Query: 364 TYNILINGLCKYGL-VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +YN +INGL + G  +D A + F+QM+ +   PD+VTYN+++ AL K   +++A  +L  
Sbjct: 204 SYNTVINGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVR 263

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  +   P  IT+N+L+ G    G    A+ ++ +M  +G+ PD  T+ TL+   C+  +
Sbjct: 264 MVKNGAMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGR 323

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
             EA  +   + KRG+K  ++ Y  ++HG      +     +L++M+ +  +PD  +F+ 
Sbjct: 324 SMEARKIFDSMVKRGHKPNSATYGTLLHGYATEGSLVKMHHLLDMMVRNGIQPDHYIFNI 383

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++      G  ++A  L+ K+
Sbjct: 384 LIGTYTKHGKVDDAMLLFSKM 404



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 58/248 (23%), Positives = 120/248 (48%), Gaps = 42/248 (16%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL-- 417
           P + TY+++I+   + G +D A  +  +++      + +T++ +L ALC +   +EA+  
Sbjct: 89  PNLITYSVVIDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDI 148

Query: 418 -------------------------------QLLHLLNGSSCS--------PCLITYNTL 438
                                          Q LHLL+    +        P +++YNT+
Sbjct: 149 ALRRMPVLGCTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTV 208

Query: 439 IDGLAKKG-CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           I+GL ++G  ++ A  L+ QM++ G+SPD +T+ ++I    +A  +++A  +L  + K G
Sbjct: 209 INGLLREGRQLDTAYHLFDQMLDQGLSPDVVTYNSIISALSKARAMDKAAVVLVRMVKNG 268

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  +  ++HG C S K + AI V + M     +PD   ++T++  +  +G + EA 
Sbjct: 269 AMPNRITHNSLLHGYCSSGKPNDAIGVFKRMCRDGVEPDVFTYNTLMGYLCKNGRSMEAR 328

Query: 558 KLWQKLIE 565
           K++  +++
Sbjct: 329 KIFDSMVK 336



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 41/194 (21%), Positives = 93/194 (47%), Gaps = 9/194 (4%)

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKE--GMLNEALQLLHLLNGSSCSPCLITYNTL 438
           A ++F++++ +     IV  N  L    +    +     + + ++      P LITY+ +
Sbjct: 38  AHHAFDELLHRPTTSSIVDLNRALSDAARHSPAVAISLFRRMVMVARPKVPPNLITYSVV 97

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL-LKEIGKRG 497
           ID  ++ G ++ A    G+++ +G + + IT   L+   C   +  EA+D+ L+ +   G
Sbjct: 98  IDCCSRVGHLDLAFAALGRVIRSGWTAEAITFSPLLKALCDKKRTSEAMDIALRRMPVLG 157

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR-----YKPDDTVFSTIVKKVADDG- 551
                 +Y +++ GLC   +   A+ +L  M+ +      Y PD   ++T++  +  +G 
Sbjct: 158 CTPNVFSYTILLKGLCDENRSQQALHLLHTMMVADDTRGGYPPDVVSYNTVINGLLREGR 217

Query: 552 MTEEAYKLWQKLIE 565
             + AY L+ ++++
Sbjct: 218 QLDTAYHLFDQMLD 231


>gi|296085490|emb|CBI29222.3| unnamed protein product [Vitis vinifera]
          Length = 826

 Score =  213 bits (542), Expect = 2e-52,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 225/445 (50%), Gaps = 4/445 (0%)

Query: 123 ILQNFCSRGK---LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           ++  +C++ +     +A  +   +A +   P    C  L+  L++ + +EK+  V + M 
Sbjct: 180 LIHVYCTQFRNVGFRNAIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETM- 238

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  PD   ++  +   CK G++  AI L  +M   G  P+V+TYN ++  +  +G   
Sbjct: 239 RQGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLD 298

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A  F +  ++ G    LITY++LI  + K      A  VL +   +G +P+ V YN+L+
Sbjct: 299 EAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLI 358

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK G   DA+ +  +++S+G+ PNS+T N+++      G  +  + IL+ M     S
Sbjct: 359 DGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFS 418

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
                +  +I+ LC     + A+    +M+ +N +P+     T++G LCKEG  ++A++L
Sbjct: 419 INPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVEL 478

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              L        L+T N LI GL K G M++A+ L  +M+E G   D IT+ TLI G C+
Sbjct: 479 WFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCK 538

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             +VEE   L  E+ K+G +     Y L+IHG+C+  K+D A+ +     S    P+   
Sbjct: 539 EGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYT 598

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLI 564
           +  ++         EE  KL+ +L+
Sbjct: 599 YGVMIDGYCKADKIEEGEKLFTELL 623



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 120/447 (26%), Positives = 224/447 (50%), Gaps = 6/447 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E   N ++  +C  G L DA ++   M  +   P+     ++I+G  +I ++E+A  +L
Sbjct: 350 NEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQMEQAECIL 409

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G   +   +  ++  LC   +  SA+  L EM +    P+     T++  +   
Sbjct: 410 EEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKE 469

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+  W   L KG    L+T   LI  +CK   +  A+ +L  M   G   D +TY
Sbjct: 470 GKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITY 529

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK+GK ++   +   ++ +G+EP++ TYN L+H +   G    +D+ +++ NE
Sbjct: 530 NTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIG---KLDEAVNLWNE 586

Query: 356 ASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
                  P V+TY ++I+G CK   ++     F +++++N + + V YNT++ A C+ G 
Sbjct: 587 CKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGN 646

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             EA +L   +      P   TY++LI G+   G ME A  L  +M + G+ P+ + +  
Sbjct: 647 TVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTA 706

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G+C+  Q+++ V++L+E+           Y ++I G  KS  +  A ++L  M+   
Sbjct: 707 LIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKG 766

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKL 559
             PD   ++ +      +G  EE +K+
Sbjct: 767 IVPDTVTYNVLTNGFCKEGKIEEGFKI 793



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 223/481 (46%), Gaps = 35/481 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G L +A +  + M +            LI GL+++++  +A+ VL+  
Sbjct: 283 TYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKFNEANSVLKET 342

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI---------- 228
           +  G  P+ + YN ++ G CK G +  A+ +  +M   G  P+ +T N+I          
Sbjct: 343 LEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSIIQGFCKIGQM 402

Query: 229 ------LRTMFDNG-------------------KFKQAIGFWKDQLRKGCPPYLITYTIL 263
                 L  M   G                   +F+ A+ F ++ L +   P     T L
Sbjct: 403 EQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTL 462

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           +  +CK+   + A+E+   +  +G   ++VT N+L++  CK G   +AV ++  +L RG 
Sbjct: 463 VGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGF 522

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             + ITYNTL+      G  +   K+   M +    P  FTYN+LI+G+C+ G +D A+N
Sbjct: 523 VLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVN 582

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            +N+  S++  P++ TY  ++   CK   + E  +L   L   +     + YNTLI    
Sbjct: 583 LWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYC 642

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           + G   +A  L+  M   GI P   T+ +LI G C   ++E+A  L+ E+ K G      
Sbjct: 643 RNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVV 702

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I G CK  ++D  + VL+ M S    P+   ++ ++   +  G  + A KL  ++
Sbjct: 703 CYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEM 762

Query: 564 I 564
           +
Sbjct: 763 V 763



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 182/355 (51%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  GK +DA +L   +  +    +      LI GL +   +++A ++L+ M+  G
Sbjct: 462 LVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERG 521

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V D ITYN ++ G CK G++     L  EM   G EPD  TYN ++  M   GK  +A+
Sbjct: 522 FVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAV 581

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             W +   +   P + TY ++I+  CK   I    ++  ++  +    + V YN+L+   
Sbjct: 582 NLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAY 641

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G   +A  + +++ S+G+ P + TY++L+H + + G  +    ++D M +    P V
Sbjct: 642 CRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNV 701

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y  LI G CK G +D+ +N   +M S +  P+ +TY  ++    K G +  A +LLH 
Sbjct: 702 VCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHE 761

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           + G    P  +TYN L +G  K+G +E+   +   M + G+  D+IT+ TL+ G+
Sbjct: 762 MVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDYMSQEGLPLDEITYTTLVHGW 816



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 192/389 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+   C   +   A + +  M  RN  P+      L+ GL +  +   A ++   ++  G
Sbjct: 427 IIHWLCMNSRFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKG 486

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              + +T N ++ GLCK G ++ A+ LL +M   G   D ITYNT++      GK ++  
Sbjct: 487 FGANLVTTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGF 546

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               + +++G  P   TY +LI  +C+   +  A+ + ++       P++ TY  +++  
Sbjct: 547 KLRGEMVKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGY 606

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK  K ++   +   LL++ +E NS+ YNTL+ +    G      K+ D M      PT 
Sbjct: 607 CKADKIEEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTT 666

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ LI+G+C  G ++ A    ++M  +   P++V Y  ++G  CK G +++ + +L  
Sbjct: 667 ATYSSLIHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQE 726

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++     P  ITY  +IDG +K G M+ A  L  +M+  GI PD +T+  L  GFC+  +
Sbjct: 727 MSSYDIHPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGK 786

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           +EE   +   + + G  +    Y  ++HG
Sbjct: 787 IEEGFKICDYMSQEGLPLDEITYTTLVHG 815



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 211/431 (48%), Gaps = 2/431 (0%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           FC  GK+ DA +L   M +    P+     NLI GL +   +++A +  + MV  G    
Sbjct: 256 FCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNAT 315

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            ITY++++ GL K  +   A ++L E    G  P+ + YNT++      G    A+    
Sbjct: 316 LITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRG 375

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           D + KG  P  +T   +I+  CK   + +A  +L++M   G S +   + +++++ C   
Sbjct: 376 DMVSKGINPNSVTLNSIIQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNS 435

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW-DAVDKILDIMNEASHSPTVFTY 365
           +++ A+  +  +L R M PN     TL+  L   G   DAV+    ++ E      + T 
Sbjct: 436 RFESALRFLREMLLRNMRPNDGLLTTLVGGLCKEGKHSDAVELWFRLL-EKGFGANLVTT 494

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N LI+GLCK G +  A+    +M+ +    D +TYNT++   CKEG + E  +L   +  
Sbjct: 495 NALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVK 554

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P   TYN LI G+ + G +++A+ L+ +     + P+  T+  +I G+C+AD++EE
Sbjct: 555 QGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEE 614

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
              L  E+  +  ++ +  Y  +I   C++     A ++ + M S    P    +S+++ 
Sbjct: 615 GEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIH 674

Query: 546 KVADDGMTEEA 556
            + + G  E+A
Sbjct: 675 GMCNIGRMEDA 685



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/405 (26%), Positives = 196/405 (48%), Gaps = 41/405 (10%)

Query: 202 QIRSAIALLDEMSVSG---CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           +I SA+A L+E+  SG      D++ +  +  T F N  F+ AIG ++    KG  P + 
Sbjct: 156 EIASAMADLNEVGESGVAVAAVDLLIH--VYCTQFRNVGFRNAIGVFRFLANKGVFPTVK 213

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T T L+  + K   + ++  V + M  +G SPD+  +++ +N  CK GK +DA+ +  ++
Sbjct: 214 TCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAINAFCKGGKVEDAIQLFFDM 272

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G+ PN +TYN L+H L   G  D   +  + M +   + T+ TY++LINGL K    
Sbjct: 273 EKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNATLITYSVLINGLMKLEKF 332

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + A +   + + K   P+ V YNT++   CK G L +AL++   +     +P  +T N++
Sbjct: 333 NEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIRGDMVSKGINPNSVTLNSI 392

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGIS---------------------------------- 464
           I G  K G ME+A  +  +M+  G S                                  
Sbjct: 393 IQGFCKIGQMEQAECILEEMLSRGFSINPGAFTTIIHWLCMNSRFESALRFLREMLLRNM 452

Query: 465 -PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P+D    TL+ G C+  +  +AV+L   + ++G          +IHGLCK+  +  A++
Sbjct: 453 RPNDGLLTTLVGGLCKEGKHSDAVELWFRLLEKGFGANLVTTNALIHGLCKTGNMQEAVR 512

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +L+ M+   +  D   ++T++     +G  EE +KL  ++++  +
Sbjct: 513 LLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEMVKQGI 557



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 92/323 (28%), Positives = 152/323 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G + +A +L+  M  R  + D      LI G  +  ++E+  K+   M
Sbjct: 493 TTNALIHGLCKTGNMQEAVRLLKKMLERGFVLDKITYNTLISGCCKEGKVEEGFKLRGEM 552

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PDT TYN+++ G+C+ G++  A+ L +E       P+V TY  ++       K 
Sbjct: 553 VKQGIEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKI 612

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++    + + L +      + Y  LI   C+      A ++ DDM  +G  P   TY+SL
Sbjct: 613 EEGEKLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSL 672

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  G+ +DA  +I+ +   G+ PN + Y  L+      G  D V  +L  M+    
Sbjct: 673 IHGMCNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDI 732

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY ++I+G  K G +  A    ++MV K   PD VTYN +    CKEG + E  +
Sbjct: 733 HPNKITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFK 792

Query: 419 LLHLLNGSSCSPCLITYNTLIDG 441
           +   ++        ITY TL+ G
Sbjct: 793 ICDYMSQEGLPLDEITYTTLVHG 815



 Score =  114 bits (285), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 65/259 (25%), Positives = 126/259 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T N ++   C  GKL +A  L +    R+ +P+ +    +I G  + D+IE+  
Sbjct: 557 IEPDTFTYNLLIHGMCRIGKLDEAVNLWNECKSRDLVPNVYTYGVMIDGYCKADKIEEGE 616

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+   ++      +++ YN ++   C+ G    A  L D+M   G  P   TY++++  M
Sbjct: 617 KLFTELLTQNLELNSVVYNTLIRAYCRNGNTVEAFKLHDDMRSKGIPPTTATYSSLIHGM 676

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            + G+ + A     +  ++G  P ++ YT LI   CK   + + + VL +M+     P+ 
Sbjct: 677 CNIGRMEDAKCLIDEMRKEGLLPNVVCYTALIGGYCKLGQMDKVVNVLQEMSSYDIHPNK 736

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TY  +++   K G    A  +++ ++ +G+ P+++TYN L +     G  +   KI D 
Sbjct: 737 ITYTVMIDGYSKSGDMKTAAKLLHEMVGKGIVPDTVTYNVLTNGFCKEGKIEEGFKICDY 796

Query: 353 MNEASHSPTVFTYNILING 371
           M++        TY  L++G
Sbjct: 797 MSQEGLPLDEITYTTLVHG 815



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 48/195 (24%), Positives = 95/195 (48%), Gaps = 1/195 (0%)

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           AI  F  + +K   P + T   +L +L K   L ++  +   +     SP +  ++T I+
Sbjct: 196 AIGVFRFLANKGVFPTVKTCTFLLSSLVKANELEKSYWVFETMR-QGVSPDVYLFSTAIN 254

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
              K G +E A+ L+  M + G+SP+ +T+  LI G C+   ++EA    +++ K G   
Sbjct: 255 AFCKGGKVEDAIQLFFDMEKLGVSPNVVTYNNLIHGLCKHGNLDEAFRFKEKMVKDGVNA 314

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y ++I+GL K +K + A  VL+  +   + P++ V++T++      G   +A ++ 
Sbjct: 315 TLITYSVLINGLMKLEKFNEANSVLKETLEKGFTPNEVVYNTLIDGYCKMGNLGDALRIR 374

Query: 561 QKLIEWKVFEKGTTL 575
             ++   +     TL
Sbjct: 375 GDMVSKGINPNSVTL 389


>gi|242084770|ref|XP_002442810.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
 gi|241943503|gb|EES16648.1| hypothetical protein SORBIDRAFT_08g003240 [Sorghum bicolor]
          Length = 722

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 218/446 (48%), Gaps = 2/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T+N ++     +G L +A+++++ M    +   F +   LI GL+    ++KA  +   M
Sbjct: 276 THNVVITGLARKGDLEEAAEMVEGMRLSKKASSFTYN-PLITGLLAKGFVKKADDLQLEM 334

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +P  +TYN M+ GL + GQ+ +A     EM   G +PDVITYN++L      G  
Sbjct: 335 ENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMRAMGLQPDVITYNSLLNGYCKAGSL 394

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A+  + D    G  P ++TY ILI+  C+   +  A  + ++M  +GC PD+ TY  L
Sbjct: 395 KEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLEEARRLKEEMVEQGCLPDVCTYTIL 454

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +  S        A    + +LS+G++P+   YNT + +  + G      ++ ++M     
Sbjct: 455 MKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRIRAELTLGAIAKAFRLREVMMLEGI 514

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S    TYNILI+GLCK G ++ A +   +MV    QPD +TY  ++ A C+ G+L EA +
Sbjct: 515 SSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPDCITYTCLIHAHCERGLLREARK 574

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               +     +P  +TY   I    ++G +  A   + +M+E G+ P++IT+  LI   C
Sbjct: 575 FFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALC 634

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  + + A     E+ +RG       Y L+I G CK    + A++    M  +   PD  
Sbjct: 635 RTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMHQNGIHPDYL 694

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
               + K   D+G    A +  +  +
Sbjct: 695 THKALFKGF-DEGHMNHAIEYLENAV 719



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 221/461 (47%), Gaps = 15/461 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI------PDFHFCINLIRGLIRID 166
           V  D K  N++L+       L+DA++  DI A   ++      P       L+   ++  
Sbjct: 198 VAPDVKDCNRVLR------VLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDSFLKEG 251

Query: 167 RIEKASKVLQIMVM--SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           R +K + +L+ M    SG +P+ +T+N+++ GL ++G +  A  +++ M +S  +    T
Sbjct: 252 RNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-KASSFT 310

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN ++  +   G  K+A     +   +G  P ++TY  +I  + +   +  A     +M 
Sbjct: 311 YNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQVKFVEMR 370

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             G  PD++TYNSL+N  CK G   +A+L+  +L   G+ P  +TYN L+      G  +
Sbjct: 371 AMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYCRLGDLE 430

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
              ++ + M E    P V TY IL+ G      +  A   F++M+SK  QPD   YNT +
Sbjct: 431 EARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCFAYNTRI 490

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            A    G + +A +L  ++     S   +TYN LIDGL K G +  A  L  +M+ NG+ 
Sbjct: 491 RAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQ 550

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD IT+  LI   C    + EA    K++   G       Y + IH  C+   +  A   
Sbjct: 551 PDCITYTCLIHAHCERGLLREARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGW 610

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              M+    +P++  ++ ++  +   G T+ AY+ + +++E
Sbjct: 611 FRKMLEEGVEPNEITYNVLIHALCRTGRTQLAYRHFHEMLE 651



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/396 (27%), Positives = 188/396 (47%), Gaps = 40/396 (10%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           ++   EM+  G  PDV   N +LR + D  ++        + L+ G  P ++TY  L++ 
Sbjct: 187 LSAFHEMASHGVAPDVKDCNRVLRVLSDAARWDDICAVHAEMLQLGIEPSIVTYNTLLDS 246

Query: 267 VCKQCGIARAIEVLDDMAIE--GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL-LSRGM 323
             K+    +   +L +M     GC P+ VT+N ++    ++G  ++A  ++  + LS+  
Sbjct: 247 FLKEGRNDKVAMLLKEMETRGSGCLPNDVTHNVVITGLARKGDLEEAAEMVEGMRLSK-- 304

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           + +S TYN L+  L ++G     D +   M      PTV TYN +I+GL + G V+ A  
Sbjct: 305 KASSFTYNPLITGLLAKGFVKKADDLQLEMENEGIMPTVVTYNAMIHGLLQSGQVEAAQV 364

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +M +   QPD++TYN++L   CK G L EAL L   L  +  +P ++TYN LIDG  
Sbjct: 365 KFVEMRAMGLQPDVITYNSLLNGYCKAGSLKEALLLFGDLRHAGLAPTVLTYNILIDGYC 424

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG------ 497
           + G +E+A  L  +M+E G  PD  T+  L+ G   A  +  A +   E+  +G      
Sbjct: 425 RLGDLEEARRLKEEMVEQGCLPDVCTYTILMKGSHNACSLAMAREFFDEMLSKGLQPDCF 484

Query: 498 ---NKMRNS--------------------------AYRLVIHGLCKSKKVDMAIQVLELM 528
               ++R                             Y ++I GLCK+  ++ A  +   M
Sbjct: 485 AYNTRIRAELTLGAIAKAFRLREVMMLEGISSDTVTYNILIDGLCKTGNLNDAKDLQMKM 544

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + +  +PD   ++ ++    + G+  EA K ++ +I
Sbjct: 545 VHNGLQPDCITYTCLIHAHCERGLLREARKFFKDMI 580



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 60/213 (28%), Positives = 95/213 (44%), Gaps = 17/213 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI--------RGLIR 164
           + +D  T N ++   C  G L DA  L   M      PD   CI           RGL+R
Sbjct: 514 ISSDTVTYNILIDGLCKTGNLNDAKDLQMKMVHNGLQPD---CITYTCLIHAHCERGLLR 570

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
                +A K  + M+  G  P  +TY + +   C+RG + SA     +M   G EP+ IT
Sbjct: 571 -----EARKFFKDMISDGLAPSAVTYTVFIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 625

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN ++  +   G+ + A   + + L +G  P   TYT+LI+  CK+     A+    +M 
Sbjct: 626 YNVLIHALCRTGRTQLAYRHFHEMLERGLVPNKYTYTLLIDGNCKEGNWEDAMRFYFEMH 685

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
             G  PD +T+ +L      +G  + A+  + N
Sbjct: 686 QNGIHPDYLTHKALFK-GFDEGHMNHAIEYLEN 717


>gi|224069551|ref|XP_002326371.1| predicted protein [Populus trichocarpa]
 gi|222833564|gb|EEE72041.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 222/456 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +   G + +A+  +  + +    PD     +LI G  R + +  A KV  +M
Sbjct: 216 TLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMM 275

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G   + ++Y  ++ GLC+ G+I   I+L  +M    C P V TY  I+  +F N + 
Sbjct: 276 PNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRN 335

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            + +  + +   + C P + TYT++++ +CK+  +  +  +L++M  +G  P +VTYN+L
Sbjct: 336 LEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNAL 395

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C++G+ + A+ ++  + S    PN  TYN L+     R        +L  M E+  
Sbjct: 396 IRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKL 455

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P++ TYN LI+  CK G  D A    + +      PD  TY+  +  LCK   + EA  
Sbjct: 456 TPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACD 515

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L + L         + Y  LIDG  K G +++A+ L  +M      P+  T+ +LI+G C
Sbjct: 516 LFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVC 575

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +V+E + +++ + K G K   + Y ++I  + +    D A +V   M+S  +KPD  
Sbjct: 576 KEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVY 635

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            ++  +      G  +EA  +  ++IE  V     T
Sbjct: 636 TYTAFIHTYCTSGNVKEAEGMMARMIEAGVMPDSLT 671



 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 217/418 (51%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +P+ +    ++    ++  I +A+  +  +  +G  PD+ TY  ++ G C+   + SA  
Sbjct: 211 VPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGYCRNNDVNSAYK 270

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           + + M   GC  + ++Y TI+  + + G+  + I  +K      C P + TYT++I  + 
Sbjct: 271 VFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTVRTYTVIIHALF 330

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
                   +++ ++M    C P++ TY  +V+  CK+ K D++  ++N ++ +G+ P+ +
Sbjct: 331 GNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVV 390

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TYN L+      G  +A  +IL +M   +  P   TYN LI G  K   V +A+   ++M
Sbjct: 391 TYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKM 450

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           +     P +VTYN+++   CK G  + A +LL LL  +   P   TY+  ID L K   M
Sbjct: 451 LESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRM 510

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E+A  L+  + E GI  +++ +  LI G C+A +++EA+ LL+ +        +S Y  +
Sbjct: 511 EEACDLFNSLKEKGIKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSL 570

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           I+G+CK  KV   + ++E M     KP    ++ +++++  +G  + A +++ +++ +
Sbjct: 571 IYGVCKEGKVQEGLSMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSF 628



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 116/406 (28%), Positives = 196/406 (48%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+  L R   I++  +V   M+    VP+  T N MV    K G I  A   + ++  +G
Sbjct: 185 LLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAG 244

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PD  TY +++     N     A   +     KGC    ++YT +I  +C+   I   I
Sbjct: 245 LSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGI 304

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +   M  + C P + TY  +++      +  + + + N +  R  EPN  TY  ++ ++
Sbjct: 305 SLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAM 364

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                 D   +IL+ M E    P+V TYN LI G C+ G ++ A+     M S NC+P+ 
Sbjct: 365 CKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNE 424

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            TYN ++    K   +++A+ LL  +  S  +P L+TYN+LI    K G  + A  L   
Sbjct: 425 RTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDL 484

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           + ENG+ PD  T+   I   C++ ++EEA DL   + ++G K     Y  +I G CK+ K
Sbjct: 485 LKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEVMYTALIDGHCKAGK 544

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +D AI +LE M S    P+ + +++++  V  +G  +E   + + +
Sbjct: 545 IDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENM 590



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 102/362 (28%), Positives = 172/362 (47%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T   ++   C   KL ++ ++++ M  +  +P       LIRG     RIE A +
Sbjct: 351 EPNVHTYTVMVDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALE 410

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L +M  +   P+  TYN ++ G  KR  +  A+ LL +M  S   P ++TYN+++    
Sbjct: 411 ILGLMESNNCRPNERTYNELICGFSKRKHVHKAMTLLSKMLESKLTPSLVTYNSLIHVQC 470

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G F  A          G  P   TY++ I+ +CK   +  A ++ + +  +G   + V
Sbjct: 471 KAGHFDSAYKLLDLLKENGLVPDQWTYSVFIDTLCKSKRMEEACDLFNSLKEKGIKANEV 530

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y +L++  CK GK D+A+ ++  + S    PNS TYN+L++ +   G       +++ M
Sbjct: 531 MYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGLSMVENM 590

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           ++    PTV TY ILI  + + G  D A   FNQMVS   +PD+ TY   +   C  G +
Sbjct: 591 SKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTYCTSGNV 650

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA  ++  +  +   P  +TY  LI    + G    A  +  +M++ G  P       L
Sbjct: 651 KEAEGMMARMIEAGVMPDSLTYTLLISAYERLGLAYDAFNVLKRMLDAGCDPSHPIWNNL 710

Query: 474 IW 475
           IW
Sbjct: 711 IW 712



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 144/288 (50%), Gaps = 4/288 (1%)

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E+L+DM +    P+I T N++VN   K G   +A L ++ +   G+ P+S TY +L+   
Sbjct: 204 EMLNDMIV----PNIYTLNTMVNAYSKMGNIVEANLYVSKIFQAGLSPDSFTYTSLILGY 259

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                 ++  K+ ++M          +Y  +I+GLC+ G +D  I+ F +M   +C P +
Sbjct: 260 CRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRIDEGISLFKKMREDDCYPTV 319

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            TY  ++ AL       E + L + +   SC P + TY  ++D + K+  ++++  +  +
Sbjct: 320 RTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVMVDAMCKERKLDESRRILNE 379

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           MME G+ P  +T+  LI G+C   ++E A+++L  +     +     Y  +I G  K K 
Sbjct: 380 MMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNCRPNERTYNELICGFSKRKH 439

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           V  A+ +L  M+ S+  P    +++++      G  + AYKL   L E
Sbjct: 440 VHKAMTLLSKMLESKLTPSLVTYNSLIHVQCKAGHFDSAYKLLDLLKE 487



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 60/275 (21%), Positives = 120/275 (43%), Gaps = 35/275 (12%)

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN------------------ 370
           +YN LL  L      D + ++   M      P ++T N ++N                  
Sbjct: 181 SYNELLMMLARFLMIDEMKRVYTEMLNDMIVPNIYTLNTMVNAYSKMGNIVEANLYVSKI 240

Query: 371 -----------------GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                            G C+   V+ A   FN M +K C+ + V+Y T++  LC+ G +
Sbjct: 241 FQAGLSPDSFTYTSLILGYCRNNDVNSAYKVFNMMPNKGCRRNEVSYTTIIHGLCEAGRI 300

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +E + L   +    C P + TY  +I  L       + M L+ +M E    P+  T+  +
Sbjct: 301 DEGISLFKKMREDDCYPTVRTYTVIIHALFGNDRNLEGMDLFNEMRERSCEPNVHTYTVM 360

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           +   C+  +++E+  +L E+ ++G       Y  +I G C+  +++ A+++L LM S+  
Sbjct: 361 VDAMCKERKLDESRRILNEMMEKGLVPSVVTYNALIRGYCEEGRIEAALEILGLMESNNC 420

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +P++  ++ ++   +      +A  L  K++E K+
Sbjct: 421 RPNERTYNELICGFSKRKHVHKAMTLLSKMLESKL 455



 Score = 76.6 bits (187), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 48/188 (25%), Positives = 91/188 (48%), Gaps = 2/188 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ +E     ++   C  GK+ +A  L++ M   + +P+     +LI G+ +  ++++  
Sbjct: 525 IKANEVMYTALIDGHCKAGKIDEAISLLERMHSEDCLPNSSTYNSLIYGVCKEGKVQEGL 584

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +++ M   G  P   TY +++  + + G    A  + ++M   G +PDV TY   + T 
Sbjct: 585 SMVENMSKMGVKPTVATYTILIEEMLREGDFDHANRVFNQMVSFGHKPDVYTYTAFIHTY 644

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR-AIEVLDDMAIEGCSPD 291
             +G  K+A G     +  G  P  +TYT+LI    ++ G+A  A  VL  M   GC P 
Sbjct: 645 CTSGNVKEAEGMMARMIEAGVMPDSLTYTLLISAY-ERLGLAYDAFNVLKRMLDAGCDPS 703

Query: 292 IVTYNSLV 299
              +N+L+
Sbjct: 704 HPIWNNLI 711


>gi|334183628|ref|NP_001185309.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
 gi|193806276|sp|P0C7R3.1|PP106_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g64583, mitochondrial; Flags: Precursor
 gi|332196135|gb|AEE34256.1| tetratricopeptide repeat-like protein [Arabidopsis thaliana]
          Length = 512

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 226/444 (50%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           K+   F    +  DA  L   M     +P       L+     + R E      Q M + 
Sbjct: 41  KLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKMELY 100

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   D  ++ +++   C+  ++  A+++L +M   G EP ++T+ ++L       +   A
Sbjct: 101 GISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDA 160

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
                  ++ G  P ++ Y  LI+ +CK   +  A+E+L++M  +G   D+VTYN+L+  
Sbjct: 161 FSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTG 220

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G++ DA  ++ +++ R + P+ +T+  L+     +G  D   ++   M ++S  P 
Sbjct: 221 LCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPN 280

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TYN +INGLC +G +  A  +F+ M SK C P++VTYNT++   CK  M++E ++L  
Sbjct: 281 NVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQ 340

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++    +  + TYNTLI G  + G +  A+ ++  M+   ++PD ITH  L+ G C   
Sbjct: 341 RMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNG 400

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++E A+    ++ +    +   AY ++IHGLCK+ KV+ A ++   +     KPD   ++
Sbjct: 401 EIESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYT 460

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++  +  +G   EA +L +++ E
Sbjct: 461 IMILGLCKNGPRREADELIRRMKE 484



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 119/385 (30%), Positives = 201/385 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  +   ++  FC   +L+ A  ++  M +    P      +L+ G   ++RI  A 
Sbjct: 102 ISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRIGDAF 161

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++ +MV SG  P+ + YN ++ GLCK G++  A+ LL+EM   G   DV+TYNT+L  +
Sbjct: 162 SLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTLLTGL 221

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G++  A    +D +++   P ++T+T LI+   KQ  +  A E+  +M      P+ 
Sbjct: 222 CYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNN 281

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYNS++N  C  G+  DA    + + S+G  PN +TYNTL+         D   K+   
Sbjct: 282 VTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQR 341

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+    +  +FTYN LI+G C+ G +  A++ F  MVS+   PDI+T+  +L  LC  G 
Sbjct: 342 MSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGE 401

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +  AL     +  S     ++ YN +I GL K   +EKA  L+ ++   G+ PD  T+  
Sbjct: 402 IESALVKFDDMRESEKYIGIVAYNIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTI 461

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           +I G C+     EA +L++ + + G
Sbjct: 462 MILGLCKNGPRREADELIRRMKEEG 486



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 86/345 (24%), Positives = 170/345 (49%), Gaps = 1/345 (0%)

Query: 225 YNTILRTMFDNG-KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           Y   LRT F +  +F+ A   + + +     P ++ +T L+            I     M
Sbjct: 38  YREKLRTGFLHSIRFEDAFALFFEMVHSQPLPSIVDFTRLLTATANLRRYETVIYFSQKM 97

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
            + G S D+ ++  L++  C+  +   A+ V+  ++  G EP+ +T+ +LLH        
Sbjct: 98  ELYGISHDLYSFTILIHCFCRCSRLSFALSVLGKMMKLGYEPSIVTFGSLLHGFCLVNRI 157

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
                ++ +M ++ + P V  YN LI+GLCK G ++ A+   N+M  K    D+VTYNT+
Sbjct: 158 GDAFSLVILMVKSGYEPNVVVYNTLIDGLCKNGELNIALELLNEMEKKGLGADVVTYNTL 217

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           L  LC  G  ++A ++L  +   S +P ++T+  LID   K+G +++A  LY +M+++ +
Sbjct: 218 LTGLCYSGRWSDAARMLRDMMKRSINPDVVTFTALIDVFVKQGNLDEAQELYKEMIQSSV 277

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P+++T+ ++I G C   ++ +A      +  +G       Y  +I G CK + VD  ++
Sbjct: 278 DPNNVTYNSIINGLCMHGRLYDAKKTFDLMASKGCFPNVVTYNTLISGFCKFRMVDEGMK 337

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + + M    +  D   ++T++      G    A  ++  ++  +V
Sbjct: 338 LFQRMSCEGFNADIFTYNTLIHGYCQVGKLRVALDIFCWMVSRRV 382



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 76/300 (25%), Positives = 136/300 (45%), Gaps = 4/300 (1%)

Query: 58  CRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSD--GPFVEN 115
           C+    N+ ++ +NE+++    ++  V+  N  L GL  + +  D +    D     +  
Sbjct: 187 CKNGELNIALELLNEMEKKGLGAD--VVTYNTLLTGLCYSGRWSDAARMLRDMMKRSINP 244

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  F  +G L +A +L   M + +  P+     ++I GL    R+  A K  
Sbjct: 245 DVVTFTALIDVFVKQGNLDEAQELYKEMIQSSVDPNNVTYNSIINGLCMHGRLYDAKKTF 304

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M   G  P+ +TYN ++ G CK   +   + L   MS  G   D+ TYNT++      
Sbjct: 305 DLMASKGCFPNVVTYNTLISGFCKFRMVDEGMKLFQRMSCEGFNADIFTYNTLIHGYCQV 364

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK + A+  +   + +   P +IT+ IL+  +C    I  A+   DDM        IV Y
Sbjct: 365 GKLRVALDIFCWMVSRRVTPDIITHCILLHGLCVNGEIESALVKFDDMRESEKYIGIVAY 424

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N +++  CK  K + A  +   L   G++P++ TY  ++  L   G     D+++  M E
Sbjct: 425 NIMIHGLCKADKVEKAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELIRRMKE 484


>gi|297851460|ref|XP_002893611.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339453|gb|EFH69870.1| hypothetical protein ARALYDRAFT_336125 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 814

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 132/480 (27%), Positives = 242/480 (50%), Gaps = 39/480 (8%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +++ ++   G+L DA K++ +M R    P+   C   I   +R +R+EKA + L+ M + 
Sbjct: 250 RVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVV 309

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD-------------------- 221
           G VP+ +TYN M+ G C   ++  AI LLD+M   GC PD                    
Sbjct: 310 GIVPNVVTYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEV 369

Query: 222 ----------------VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                            +TYNT++  +  +    +A+ F KD   KG     + Y+ ++ 
Sbjct: 370 RDLMKKMAKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVH 429

Query: 266 QVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
            +CK+  ++ A +++++M  +G C PD+VTY ++VN  C+ G+ D A  ++  + + G +
Sbjct: 430 ALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYK 489

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN+++Y  LL+ L   G      +++++  E   SP   TY++L++GL K G +  A + 
Sbjct: 490 PNTVSYTALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDV 549

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +MV K   P  V  N +L +LC++G  +EA + +       C+  ++ + T+I G  +
Sbjct: 550 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 609

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              ++ A+ +   M       D  T+ TL+    +  ++ EA +L+K++  +G       
Sbjct: 610 NDELDAALSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVT 669

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           YR VIH  C+ +KVD  + +LE MI    +   T+++ +++K+   G  EEA KL  K++
Sbjct: 670 YRTVIHRYCQMEKVDDLVAILEKMILR--QKCKTIYNQVIEKLCGLGKLEEADKLLGKVL 727



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 219/443 (49%), Gaps = 4/443 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++ +C   ++ +A +L+D M  +  +PD      ++  L +  RI +   +++ M
Sbjct: 317 TYNCMIRGYCDLHRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 376

Query: 179 VMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
               G V D +TYN ++  L K      A+  L +    G   D + Y+ I+  +   G+
Sbjct: 377 AKEHGLVRDQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGR 436

Query: 238 FKQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
             +A     + L KG CPP ++TYT ++   C+   + +A ++L  M   G  P+ V+Y 
Sbjct: 437 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYT 496

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L+N  C+ GK  +A  ++N    +   PNSITY+ L+H L   G       ++  M   
Sbjct: 497 ALLNGLCRTGKSLEAREMMNMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLK 556

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P     N+L+  LC+ G    A     + ++K C  ++V + TV+   C+   L+ A
Sbjct: 557 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 616

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           L +L  +   +    + TY TL+D L KKG + +A  L  +M+  GI P  +T+RT+I  
Sbjct: 617 LSVLDDMYLINKHADVFTYTTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHR 676

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +C+ ++V++ V +L+++  R  +   + Y  VI  LC   K++ A ++L  ++ +  + D
Sbjct: 677 YCQMEKVDDLVAILEKMILR--QKCKTIYNQVIEKLCGLGKLEEADKLLGKVLRTASRSD 734

Query: 537 DTVFSTIVKKVADDGMTEEAYKL 559
                 +++     G+   AYK+
Sbjct: 735 AKTCYALMEGYLKIGVPLLAYKV 757



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 78/297 (26%), Positives = 148/297 (49%), Gaps = 2/297 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  FC  G++  A KL+ IM      P+      L+ GL R  +  +A +++
Sbjct: 456 DVVTYTAVVNGFCRLGEVDKAKKLLQIMHTHGYKPNTVSYTALLNGLCRTGKSLEAREMM 515

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +       P++ITY++++ GL K G++  A  ++ EM + G  P  +  N +L+++  +
Sbjct: 516 NMSEEQWWSPNSITYSVLMHGLRKEGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 575

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A  F ++ L KGC   ++ +T +I   C+   +  A+ VLDDM +     D+ TY
Sbjct: 576 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 635

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +LV+   K+G+  +A  ++  +L +G++P  +TY T++H        D +  IL+ M  
Sbjct: 636 TTLVDALGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMEKVDDLVAILEKMIL 695

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
                T+  YN +I  LC  G ++ A     +++    + D  T   ++    K G+
Sbjct: 696 RQKCKTI--YNQVIEKLCGLGKLEEADKLLGKVLRTASRSDAKTCYALMEGYLKIGV 750



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 69/277 (24%), Positives = 127/277 (45%), Gaps = 10/277 (3%)

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D + Y S++    K      A  V+  +  RG+      +  ++ S    G      K+L
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
            +M  A   P +   N  I+   +   +++A+    +M      P++VTYN ++   C  
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM-----ENGISP 465
             + EA++LL  +    C P  ++Y T++  L    C EK +V    +M     E+G+  
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIMGYL----CKEKRIVEVRDLMKKMAKEHGLVR 384

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +T+ TLI    + D  +EA+  LK+  ++G ++    Y  ++H LCK  ++  A  ++
Sbjct: 385 DQVTYNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLI 444

Query: 526 ELMISSRYKPDDTV-FSTIVKKVADDGMTEEAYKLWQ 561
             M+S  + P D V ++ +V      G  ++A KL Q
Sbjct: 445 NEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQ 481



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 53/240 (22%), Positives = 105/240 (43%), Gaps = 1/240 (0%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           + + Y ++L  L          ++L +M       T   +  ++    + G +  A+   
Sbjct: 209 DPMVYYSMLEVLSKTKMCQGARRVLVLMKRRGIYRTPEAFLRVMVSYSRAGQLRDALKVL 268

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
             M     +P+++  NT +    +   L +AL+ L  +      P ++TYN +I G    
Sbjct: 269 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 328

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-A 504
             +E+A+ L   M   G  PD +++ T++   C+  ++ E  DL+K++ K    +R+   
Sbjct: 329 HRVEEAIELLDDMPSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVRDQVT 388

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +IH L K    D A+  L+      ++ D   +S IV  +  +G   EA  L  +++
Sbjct: 389 YNTLIHMLTKHDHADEALWFLKDAEEKGFRIDKVGYSAIVHALCKEGRMSEAKDLINEML 448


>gi|224030417|gb|ACN34284.1| unknown [Zea mays]
 gi|413950072|gb|AFW82721.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 647

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 222/459 (48%), Gaps = 30/459 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C   ++  A K++D MAR+   PD      ++  L ++DR+++A++VL  M
Sbjct: 165 TYNLLVRALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM 224

Query: 179 ------------------------------VMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
                                         V  G  P+ ITY  +V   CK G++R A A
Sbjct: 225 PPVAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACA 284

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           +L  M ++GC P+V+T+  ++R +FD+G+   A+  W+  + +G  P  ++Y ILI  +C
Sbjct: 285 ILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLC 344

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
               +  A  +L+ M   GC P++ TY++L++   K G    A+ + N++   G +PN +
Sbjct: 345 SVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVV 404

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            Y  ++     +  ++    ++D M   +  P   T+N LI  LC    V RA+  F++M
Sbjct: 405 VYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEM 464

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
               C P+  TYN ++  L +EG   +AL ++  +        L+TYNT++ GL +    
Sbjct: 465 RRHGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMS 524

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +AMV  G+M+  GI P+  T   +I  +C+  +V  A  +L  +           Y ++
Sbjct: 525 REAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTIL 584

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +  LC   K+  A+  L  M+     P+   ++ +V+ V
Sbjct: 585 MAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 189/376 (50%), Gaps = 2/376 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I+  FC  G+L  A  ++  M      P+      L+RGL    R+  A  + + M
Sbjct: 265 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 324

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P T++YN+++ GLC  G ++ A ++L+ M   GC P+V TY+T++      G  
Sbjct: 325 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 384

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI  W D  R GC P ++ YT +++  CK+    +A  ++D M +E C P+ VT+N+L
Sbjct: 385 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 444

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEAS 357
           +   C   +   A+ V + +   G  PN  TYN L+H L   G C DA+  + + M    
Sbjct: 445 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE-MQSHG 503

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
              ++ TYN +++GLC+  +   A+    +M+ +  QP+  T++ ++ A CKEG +  A 
Sbjct: 504 IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA 563

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L  +N  +C   ++ Y  L+  L  +  +  AM    +M+  GI P+ +T   L+ G 
Sbjct: 564 WMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 623

Query: 478 CRADQVEEAVDLLKEI 493
            R     E  D ++ I
Sbjct: 624 FRNLGCIEPSDFIQHI 639



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 207/430 (48%), Gaps = 30/430 (6%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +LI  L+R + +     V   M   G  P+  TYN++V  LC+  ++ +A  +LDEM+  
Sbjct: 133 HLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMARK 192

Query: 217 GCEPDVITYNTILRTM-----FDNG-------------------------KFKQAIGFWK 246
           GC PD +TY TI+  +      D                           + ++      
Sbjct: 193 GCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSVVS 252

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           D + +G  P +ITYT +++  CK   +  A  +L  M I GC+P++VT+ +LV      G
Sbjct: 253 DMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDG 312

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           +  DA+ +   +++ G  P++++YN L+  L S G       IL+ M +    P V TY+
Sbjct: 313 RVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYS 372

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI+G  K G +  AI+ +N M    C+P++V Y  ++   CK+ M N+A  L+  +   
Sbjct: 373 TLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLE 432

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           +C P  +T+NTLI  L     + +A+ ++ +M  +G  P+  T+  LI G  R     +A
Sbjct: 433 NCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDA 492

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + ++ E+   G ++    Y  V+ GLC+++    A+  +  MI    +P+   FS I+  
Sbjct: 493 LHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHA 552

Query: 547 VADDGMTEEA 556
              +G    A
Sbjct: 553 YCKEGEVRMA 562



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 182/406 (44%), Gaps = 32/406 (7%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           YN ++  L +   + + + + D M   G  P+V TYN ++R +  N +   A     +  
Sbjct: 131 YNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVGAARKMLDEMA 190

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVL----------------------------- 280
           RKGCPP  +TY  ++  +CK   +  A EVL                             
Sbjct: 191 RKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCREFRMQEVFSV 250

Query: 281 -DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
             DM   G  P+++TY ++V+  CK G+   A  ++  ++  G  PN +T+  L+  L  
Sbjct: 251 VSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFD 310

Query: 340 RG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
            G   DA+D +   M     +P+  +YNILI GLC  G +  A +  N M    C P++ 
Sbjct: 311 DGRVHDALD-MWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVR 369

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           TY+T++    K G L  A+ + + ++ S C P ++ Y  ++D   KK    +A  L  +M
Sbjct: 370 TYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKM 429

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           +     P+ +T  TLI   C   +V  A+ +  E+ + G       Y  +IHGL +    
Sbjct: 430 LLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNC 489

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             A+ ++  M S   +     ++T+V  +    M+ EA     K+I
Sbjct: 490 GDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVGKMI 535



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/274 (26%), Positives = 117/274 (42%), Gaps = 32/274 (11%)

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           +R  EP    YN L+ +L       AV  + D M +    P VFTYN+L+  LC+   V 
Sbjct: 123 ARPTEPR--LYNHLIDALLRENMVGAVVLVYDNMRKDGVHPNVFTYNLLVRALCQNNRVG 180

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN--------------- 424
            A    ++M  K C PD VTY T++  LCK   L+EA ++L  +                
Sbjct: 181 AARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYNAIVLALCR 240

Query: 425 ---------------GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
                          G    P +ITY T++D   K G +  A  +  +M+  G +P+ +T
Sbjct: 241 EFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNVVT 300

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              L+ G     +V +A+D+ + +   G      +Y ++I GLC    +  A  +L  M 
Sbjct: 301 FTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSME 360

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                P+   +ST++   +  G    A  +W  +
Sbjct: 361 QHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDM 394


>gi|218188645|gb|EEC71072.1| hypothetical protein OsI_02831 [Oryza sativa Indica Group]
          Length = 800

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 120/417 (28%), Positives = 221/417 (52%), Gaps = 1/417 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+GL+  D++ K +  L   +   G+PD  TYN+++  LC+R +IR A+ L ++M+ +G
Sbjct: 358 VIKGLLN-DKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETG 416

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P ++TY+++L     NG   +A+  + +   KG  P ++TYT L++    +    +A 
Sbjct: 417 VKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAY 476

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L +M   G S +  TYN+L+N  C  G+  +   ++    + G  P ++TYN++++  
Sbjct: 477 ALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGF 536

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G   +   +   M      P + TY   I+G CK    D A+   N +  K  +PDI
Sbjct: 537 IKAGMMGSAFAVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDI 596

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
             YN+++   C+EG ++ ALQ+L L+      P +  YN+ I G      ME+A+  Y +
Sbjct: 597 AAYNSLIYGFCQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEK 656

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M++ GI  D  T+ TLI GF +   V  A+ L  E+  +GN   +  +  + HGLC++  
Sbjct: 657 MIKEGIDLDTATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGD 716

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +D A ++L+ M     +P+  +++ ++     +G  +EA++L  +++E K+    TT
Sbjct: 717 IDDARKLLDEMNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTT 773



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/470 (27%), Positives = 223/470 (47%), Gaps = 36/470 (7%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G   DA +L D M      PD   C   I  L ++    +A  VL+ M  +G VP   T+
Sbjct: 191 GMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTF 250

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N +V  L K G++  A+ + DE+  +G +  V+   T++       + ++A+  +++ LR
Sbjct: 251 NSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLR 310

Query: 251 KGCPPYLITYTILIE------------QVCKQC-----------------GIAR------ 275
            G  P  +TYT+LI             ++C+Q                  G+        
Sbjct: 311 DGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKD 370

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ +  +MA  G  PD  TYN L+++ C++ K  +A+ +   +   G++P  +TY++LL 
Sbjct: 371 AVSLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPYIVTYHSLLL 429

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                GC D   K+   M     +P V TY  L+ G       D+A     +M       
Sbjct: 430 CYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLAEMKQNGVSC 489

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +  TYNT++  LC  G + E  ++L         P  +TYN++I+G  K G M  A  +Y
Sbjct: 490 NDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAFAVY 549

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            QM   GI P+ +T+ + I G+C+    + A+ +L ++  +G +   +AY  +I+G C+ 
Sbjct: 550 QQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGFCQE 609

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +  A+QVL LM+     P+ +V+++ +    +  M EEA + ++K+I+
Sbjct: 610 GNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIK 659



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 101/388 (26%), Positives = 190/388 (48%), Gaps = 3/388 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           ++R   +    + A ++   M  S   PD    ++ +  LCK      A+ +L +M  +G
Sbjct: 183 VMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAG 242

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P   T+N+++  +   G+ ++A+    + L  G    ++  T L+   C Q  + +A+
Sbjct: 243 FVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKAL 302

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++ ++   +G  P  VTY  L+    ++G  + A  +   +   G+ P++  +N ++  L
Sbjct: 303 DIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGL 362

Query: 338 GSRGCW-DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
            +   W DAV    ++ +  S  P  FTYNILI+ LC+   +  A+N + +M     +P 
Sbjct: 363 LNDKLWKDAVSLFKEMAD--SGIPDAFTYNILIHWLCQRRKIREALNLWEKMNETGVKPY 420

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           IVTY+++L   C  G ++EA++L   + G   +P ++TY TL+ G   K   +KA  L  
Sbjct: 421 IVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTLMKGHINKAAFDKAYALLA 480

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M +NG+S +D T+ TLI G C   +V E  ++LK     G       Y  +I+G  K+ 
Sbjct: 481 EMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAG 540

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIV 544
            +  A  V + M +    P+   +++ +
Sbjct: 541 MMGSAFAVYQQMCAKGIPPNIVTYTSFI 568



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 98/390 (25%), Positives = 175/390 (44%), Gaps = 42/390 (10%)

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           EM   G   D   ++ ++R  F  G +  A+  + +       P     ++ I  +CK  
Sbjct: 167 EMRGKGHPLDAWMFDVVMRACFKEGMYDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLR 226

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
              RA+ VL  M   G  P   T+NS+V+   K G+ ++A+ + + LL+ G + + +   
Sbjct: 227 DANRALLVLRKMQDAGFVPWDFTFNSVVDVLVKGGRMEEALHIKDELLATGKKMSVVLAT 286

Query: 332 TLLHSLGSRGCWD-AVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRA------ 381
           TL+H      C    V K LDI  E       PT  TY +LI G  + G+ ++A      
Sbjct: 287 TLMHGY----CLQREVRKALDIFEETLRDGLVPTDVTYTVLIRGCTEEGMPEKAYELCRQ 342

Query: 382 ---------INSFNQMV-------------------SKNCQPDIVTYNTVLGALCKEGML 413
                     N FN ++                   + +  PD  TYN ++  LC+   +
Sbjct: 343 MRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSLFKEMADSGIPDAFTYNILIHWLCQRRKI 402

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EAL L   +N +   P ++TY++L+      GCM++A+ LY +M   G +P+ +T+ TL
Sbjct: 403 REALNLWEKMNETGVKPYIVTYHSLLLCYCVNGCMDEAVKLYTEMPGKGFTPNVVTYTTL 462

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           + G       ++A  LL E+ + G    +  Y  +I+GLC   +V    ++L+   +  +
Sbjct: 463 MKGHINKAAFDKAYALLAEMKQNGVSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGF 522

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            P    +++I+      GM   A+ ++Q++
Sbjct: 523 VPTAMTYNSIINGFIKAGMMGSAFAVYQQM 552



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 75/293 (25%), Positives = 131/293 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  ++ T N ++   C  G++ +  +++        +P      ++I G I+   +  A 
Sbjct: 487 VSCNDYTYNTLINGLCVVGRVCEVGEMLKRFETEGFVPTAMTYNSIINGFIKAGMMGSAF 546

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V Q M   G  P+ +TY   + G CK      A+ +L+++   G  PD+  YN+++   
Sbjct: 547 AVYQQMCAKGIPPNIVTYTSFIDGYCKTSCCDLALKMLNDVRCKGLRPDIAAYNSLIYGF 606

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+      L+ G  P +  Y   I        +  A+   + M  EG   D 
Sbjct: 607 CQEGNMSHALQVLVLMLKDGLLPNISVYNSFITGYKNLKMMEEALRFYEKMIKEGIDLDT 666

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY +L++   K G    A+ + + ++++G  P+ IT+  L H L   G  D   K+LD 
Sbjct: 667 ATYTTLIDGFSKDGNVTFALKLYSEMVAKGNIPDHITFTALTHGLCRNGDIDDARKLLDE 726

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
           MN     P V  YN+LING  + G +  A    ++M+ +   PD  TY+ ++G
Sbjct: 727 MNRLDIRPNVLMYNMLINGYLRNGKLQEAFRLHDEMLERKIMPDDTTYDILVG 779



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 54/246 (21%), Positives = 117/246 (47%)

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           +RG+ P++ +   LL              +L  M    H    + +++++    K G+ D
Sbjct: 135 ARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGMYD 194

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A+  F++M +   +PD    +  + +LCK    N AL +L  +  +   P   T+N+++
Sbjct: 195 DAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNSVV 254

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           D L K G ME+A+ +  +++  G     +   TL+ G+C   +V +A+D+ +E  + G  
Sbjct: 255 DVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDGLV 314

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             +  Y ++I G  +    + A ++   M      P    F+ ++K + +D + ++A  L
Sbjct: 315 PTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAVSL 374

Query: 560 WQKLIE 565
           ++++ +
Sbjct: 375 FKEMAD 380



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 64/286 (22%), Positives = 128/286 (44%), Gaps = 1/286 (0%)

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G +PD  +   L+  + +     DA+ ++  +  +G   ++  ++ ++ +    G 
Sbjct: 133 MEARGVTPDAKSRTDLLAVTARSASAADALALLAEMRGKGHPLDAWMFDVVMRACFKEGM 192

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           +D   ++ D M  +   P     ++ I  LCK    +RA+    +M      P   T+N+
Sbjct: 193 YDDAVRLFDEMPASEIEPDQRVCSVAIASLCKLRDANRALLVLRKMQDAGFVPWDFTFNS 252

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           V+  L K G + EAL +   L  +     ++   TL+ G   +  + KA+ ++ + + +G
Sbjct: 253 VVDVLVKGGRMEEALHIKDELLATGKKMSVVLATTLMHGYCLQREVRKALDIFEETLRDG 312

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + P D+T+  LI G       E+A +L +++   G     + + +VI GL   K    A+
Sbjct: 313 LVPTDVTYTVLIRGCTEEGMPEKAYELCRQMRDHGLLPSTNEFNMVIKGLLNDKLWKDAV 372

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            + + M  S   PD   ++ ++  +       EA  LW+K+ E  V
Sbjct: 373 SLFKEMADSGI-PDAFTYNILIHWLCQRRKIREALNLWEKMNETGV 417


>gi|356561677|ref|XP_003549106.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 511

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 118/401 (29%), Positives = 210/401 (52%), Gaps = 6/401 (1%)

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
            I  A  V   ++  G  P+ IT N ++ GLC RG+I+ A+   D++   G + D ++Y 
Sbjct: 107 HITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYG 166

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           T++  +   G+ K      +        P ++ Y  +I  +CK   +  A +V  +M ++
Sbjct: 167 TLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVK 226

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G SPD+VTY +L++  C  G   +A  ++N +  + + PN  T+N L+ +L   G     
Sbjct: 227 GISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEA 286

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS---FNQMVSKNCQPDIVTYNTV 403
             +L +M +A   P VFTYN LI+G   Y LVD   ++   F  M  +   PD+  Y  +
Sbjct: 287 KILLAVMMKACIKPDVFTYNSLIDG---YFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNM 343

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +  LCK  M++EA+ L   +   +  P ++TYN+LIDGL K   +E+A+ L  +M E GI
Sbjct: 344 INGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGI 403

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD  ++  L+ G C++ ++E+A ++ + +  +G  +   AY ++I+ LCK+   D A+ 
Sbjct: 404 QPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALD 463

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +   M      PD   F  I++ + +    ++A K+ +++I
Sbjct: 464 LKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMI 504



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 219/440 (49%), Gaps = 4/440 (0%)

Query: 95  TITKKSHDPSLPSSDGPFVEN----DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           ++    H P++ S    F  N    D  T + ++  FC +  +T A  +   + +R   P
Sbjct: 66  SLVNNKHYPTVISLFKQFEPNGITPDLCTLSILINCFCHQAHITLAFSVFANILKRGFHP 125

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           +      LI+GL     I+KA      +V  G   D ++Y  ++ GLCK G+ ++   LL
Sbjct: 126 NAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQLDQVSYGTLINGLCKTGETKAVARLL 185

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
            ++     +PDV+ YNTI+ ++  N     A   + + + KG  P ++TYT LI   C  
Sbjct: 186 RKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVYSEMIVKGISPDVVTYTTLIHGFCIM 245

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             +  A  +L++M ++  +P++ T+N L++   K+GK  +A +++  ++   ++P+  TY
Sbjct: 246 GHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKEGKMKEAKILLAVMMKACIKPDVFTY 305

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N+L+              +   M +   +P V  Y  +INGLCK  +VD A++ F +M  
Sbjct: 306 NSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAMSLFEEMKH 365

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           KN  PDIVTYN+++  LCK   L  A+ L   +      P + +Y  L+DGL K G +E 
Sbjct: 366 KNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGLCKSGRLED 425

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A  ++ +++  G   +   +  LI   C+A   +EA+DL  ++  +G       + ++I 
Sbjct: 426 AKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDAVTFDIIIR 485

Query: 511 GLCKSKKVDMAIQVLELMIS 530
            L +  + D A ++L  MI+
Sbjct: 486 ALFEKDENDKAEKILREMIA 505



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/363 (30%), Positives = 189/363 (52%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A+A  + M +    P    +N IL ++ +N  +   I  +K     G  P L T +ILI 
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             C Q  I  A  V  ++   G  P+ +T N+L+   C +G+   A+   + L+++G + 
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           + ++Y TL++ L   G   AV ++L  +   S  P V  YN +IN LCK  L+  A + +
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           ++M+ K   PD+VTY T++   C  G L EA  LL+ +   + +P + T+N LID L+K+
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G M++A +L   MM+  I PD  T+ +LI G+   D+V+ A  +   + +RG       Y
Sbjct: 281 GKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCY 340

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I+GLCK+K VD A+ + E M      PD   +++++  +  +   E A  L +++ E
Sbjct: 341 TNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKE 400

Query: 566 WKV 568
             +
Sbjct: 401 QGI 403



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 108/395 (27%), Positives = 197/395 (49%), Gaps = 2/395 (0%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A     +M++    P T  +N ++  L       + I+L  +   +G  PD+ T + ++ 
Sbjct: 41  AVASFNLMLLMRPPPPTFHFNNILSSLVNNKHYPTVISLFKQFEPNGITPDLCTLSILIN 100

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                     A   + + L++G  P  IT   LI+ +C +  I +A+   D +  +G   
Sbjct: 101 CFCHQAHITLAFSVFANILKRGFHPNAITLNTLIKGLCFRGEIKKALYFHDQLVAQGFQL 160

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKI 349
           D V+Y +L+N  CK G+      ++  L    ++P+ + YNT+++SL  ++   DA D +
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACD-V 219

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M     SP V TY  LI+G C  G +  A +  N+M  KN  P++ T+N ++ AL K
Sbjct: 220 YSEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSK 279

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           EG + EA  LL ++  +   P + TYN+LIDG      ++ A  ++  M + G++PD   
Sbjct: 280 EGKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQC 339

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  +I G C+   V+EA+ L +E+  +        Y  +I GLCK+  ++ AI + + M 
Sbjct: 340 YTNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMK 399

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               +PD   ++ ++  +   G  E+A +++Q+L+
Sbjct: 400 EQGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLL 434



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 167/348 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ +   ++   C  G+    ++L+  +   +  PD      +I  L +   +  A  V 
Sbjct: 161 DQVSYGTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIINSLCKNKLLGDACDVY 220

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M++ G  PD +TY  ++ G C  G ++ A +LL+EM +    P+V T+N ++  +   
Sbjct: 221 SEMIVKGISPDVVTYTTLIHGFCIMGHLKEAFSLLNEMKLKNINPNVCTFNILIDALSKE 280

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK K+A       ++    P + TY  LI+       +  A  V   MA  G +PD+  Y
Sbjct: 281 GKMKEAKILLAVMMKACIKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCY 340

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +++N  CK    D+A+ +   +  + M P+ +TYN+L+  L      +    +   M E
Sbjct: 341 TNMINGLCKTKMVDEAMSLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKE 400

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V++Y IL++GLCK G ++ A   F ++++K    ++  Y  ++  LCK G  +E
Sbjct: 401 QGIQPDVYSYTILLDGLCKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDE 460

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           AL L   +    C P  +T++ +I  L +K   +KA  +  +M+  G+
Sbjct: 461 ALDLKSKMEDKGCMPDAVTFDIIIRALFEKDENDKAEKILREMIARGL 508



 Score =  107 bits (266), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 109/211 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  +    ++  A  +   MA+R   PD     N+I GL +   +++A 
Sbjct: 298 IKPDVFTYNSLIDGYFLVDEVKHAKYVFYSMAQRGVTPDVQCYTNMINGLCKTKMVDEAM 357

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M     +PD +TYN ++ GLCK   +  AIAL   M   G +PDV +Y  +L  +
Sbjct: 358 SLFEEMKHKNMIPDIVTYNSLIDGLCKNHHLERAIALCKRMKEQGIQPDVYSYTILLDGL 417

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G+ + A   ++  L KG    +  YT+LI ++CK      A+++   M  +GC PD 
Sbjct: 418 CKSGRLEDAKEIFQRLLAKGYHLNVHAYTVLINRLCKAGFFDEALDLKSKMEDKGCMPDA 477

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           VT++ ++    ++ + D A  ++  +++RG+
Sbjct: 478 VTFDIIIRALFEKDENDKAEKILREMIARGL 508


>gi|302773712|ref|XP_002970273.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
 gi|300161789|gb|EFJ28403.1| hypothetical protein SELMODRAFT_411148 [Selaginella moellendorffii]
          Length = 831

 Score =  213 bits (541), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 119/390 (30%), Positives = 205/390 (52%), Gaps = 4/390 (1%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  ++    T + ++Q  C  G++  A  L++ M +R   PD      LI  L + D+I+
Sbjct: 367 GRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQ 426

Query: 170 KASKVLQIM--VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYN 226
           +A + LQ M   +S       +YN ++  LCK  ++  A A+   M S     PDV++Y+
Sbjct: 427 EAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYS 486

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++       +  +A   +K  +   C P + TY   +  + ++  IA A  V ++M   
Sbjct: 487 ILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAA 546

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GCSPD++TY++L++      K+D A  +   ++SRG  PN++TYN LLH L      D  
Sbjct: 547 GCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEA 606

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            ++   M E    P   TY  L+ G C  G +++A+  F++MVSK   PD+V YN +L  
Sbjct: 607 HELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKG 666

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGISP 465
             + G   EA QL  ++    C P  +++N +IDGL+K   ++ A+ ++ +M  ++G SP
Sbjct: 667 FFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSP 726

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           D +T+ +LI+G C   ++ EA+ + KEI +
Sbjct: 727 DLVTYNSLIFGLCGEQRLSEAMKVFKEIDR 756



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 228/448 (50%), Gaps = 9/448 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L NF  + K  +ASKL   M +    PD      ++    +++ +++A K+   M +  
Sbjct: 240 LLVNFVIQDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVES 299

Query: 183 GVP-DTITYNMMVGGLCKRGQIRSAIALLDEM--SVSGCEPDVITYNTILRTMFDNGKFK 239
             P + + +   + GLCK G+I  A      M  S+S  +P    Y+ ++R + ++G+  
Sbjct: 300 KAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQP---VYDMLIRLLIESGRID 356

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A     +   +   P   T   +I+++CK   +  A+ +L+ M   G  PD+ T++ L+
Sbjct: 357 KAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLI 416

Query: 300 NFSCKQGKYDDAVLVINNLLSR--GMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEA 356
           N  CK  K  +A   +  +  +      +  +YN+LL+SL  ++    A      +++E 
Sbjct: 417 NELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSER 476

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           S  P V +Y+ILI+G CK   + RA   + QM+  NC P++ TYN  L  L ++G + +A
Sbjct: 477 SFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADA 536

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             +   +  + CSP +ITY+TLI G +     ++A  L+  M+  G  P+ +T+  L+ G
Sbjct: 537 QGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHG 596

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C+  + +EA +L +++ +RG       Y  +++G C   K++ A++V + M+S  + PD
Sbjct: 597 LCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGHDPD 656

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              ++ ++K     G   EA +L+Q ++
Sbjct: 657 VVAYNCLLKGFFRAGKPGEAKQLFQVMV 684



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 171/324 (52%), Gaps = 2/324 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIM-ARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +L + C   K+  A  +   M + R+ +PD      LI G  +ID + +A K+ + M+
Sbjct: 450 NSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMI 509

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
               VP+  TYN  + GL ++G+I  A  + +EM  +GC PDVITY+T++       K  
Sbjct: 510 DLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHD 569

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           QA   ++  + +GC P  +TY  L+  +CK+     A E+   M   GC PD VTY +L+
Sbjct: 570 QAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLL 629

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C  GK + AV V + ++S+G +P+ + YN LL      G      ++  +M      
Sbjct: 630 YGFCNVGKIEQAVEVFDEMVSKGHDPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCK 689

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQ 418
           P   ++NI+I+GL K   +D A+  F +M   + C PD+VTYN+++  LC E  L+EA++
Sbjct: 690 PDTVSHNIMIDGLSKAKRLDDAVEVFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMK 749

Query: 419 LLHLLNGSSCSPCLITYNTLIDGL 442
           +   ++    SP    +N L++ +
Sbjct: 750 VFKEIDRLKLSPDPHAFNVLLEAI 773



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 132/466 (28%), Positives = 225/466 (48%), Gaps = 13/466 (2%)

Query: 113 VENDEKTNN----KILQNFCSRGKLTDASKLIDIMARR--NQIPDFHFCINLIRGLIRID 166
           VE+    NN      L   C  GK+  A +    M     +  P +     LIR LI   
Sbjct: 297 VESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQPVYDM---LIRLLIESG 353

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           RI+KA +    +      P + T + ++  LCK G++ SA++LL+ M   G  PD+ T++
Sbjct: 354 RIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHS 413

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
            ++  +    K ++A  F +   RK         +Y  L+  +CK   + +A  +   M 
Sbjct: 414 MLINELCKADKIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMV 473

Query: 285 IE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
            E    PD+V+Y+ L++  CK  +   A  +   ++     PN  TYN  L+ L  +G  
Sbjct: 474 SERSFVPDVVSYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRI 533

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
                + + M  A  SP V TY+ LI+G       D+A   F  M+S+ C+P+ VTYN +
Sbjct: 534 ADAQGVYEEMVAAGCSPDVITYSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCL 593

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           L  LCKE   +EA +L   +    C P  +TY TL+ G    G +E+A+ ++ +M+  G 
Sbjct: 594 LHGLCKESKPDEAHELFRKMVERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMVSKGH 653

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD + +  L+ GF RA +  EA  L + +  R  K    ++ ++I GL K+K++D A++
Sbjct: 654 DPDVVAYNCLLKGFFRAGKPGEAKQLFQVMVSRQCKPDTVSHNIMIDGLSKAKRLDDAVE 713

Query: 524 VLELMISSR-YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           V E M       PD   +++++  +  +    EA K+++++   K+
Sbjct: 714 VFERMEQDHGCSPDLVTYNSLIFGLCGEQRLSEAMKVFKEIDRLKL 759



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 121/515 (23%), Positives = 217/515 (42%), Gaps = 108/515 (20%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+  LIR   +++A +V + MV  G VP+  TY ++V   C       A+    EM   G
Sbjct: 135 LLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKG 194

Query: 218 CEPDVITYNTI---LRTMFDNGKFKQAIG------------------------------- 243
            +P    Y  +   L+     G+F +  G                               
Sbjct: 195 FKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVIQDKAIEAS 254

Query: 244 -FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP-DIVTYNSLVNF 301
             ++  ++ GC P    Y+ ++   CK   +  A ++  +MA+E  +P + V + + ++ 
Sbjct: 255 KLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSG 314

Query: 302 SCKQGKYDDAV----------------------LVINN------------LLSRGMEPNS 327
            CK GK + A                       L+I +            +  R ++P+S
Sbjct: 315 LCKSGKIEQAFEACRTMQESLSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSS 374

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT----------------------- 364
            T ++++  L   G  D+   +L+ M +  + P + T                       
Sbjct: 375 GTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQG 434

Query: 365 --------------YNILINGLCKYGLVDRAINSFNQMVS-KNCQPDIVTYNTVLGALCK 409
                         YN L+N LCK   V +A   F+ MVS ++  PD+V+Y+ ++   CK
Sbjct: 435 MDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVVSYSILIDGFCK 494

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              L  A +L   +   +C P + TYN  ++GL +KG +  A  +Y +M+  G SPD IT
Sbjct: 495 IDELGRAEKLYKQMIDLNCVPNVTTYNAFLNGLMRKGRIADAQGVYEEMVAAGCSPDVIT 554

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + TLI GF  A + ++A +L + +  RG +     Y  ++HGLCK  K D A ++   M+
Sbjct: 555 YSTLIHGFSLARKHDQAHELFETMISRGCRPNAVTYNCLLHGLCKESKPDEAHELFRKMV 614

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                PD   ++T++    + G  E+A +++ +++
Sbjct: 615 ERGCDPDRVTYTTLLYGFCNVGKIEQAVEVFDEMV 649



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 84/344 (24%), Positives = 157/344 (45%), Gaps = 11/344 (3%)

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           T   +++ + D G   +A+ F++    +     + TY  L++++ +   + +A +V + M
Sbjct: 99  TVGAVIKHLRDGG---EALTFFRWLQARNFKHDVFTYNCLLDKLIRHRDLKQAGQVFEKM 155

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             +G  P+  TY  LV  SC +   D+AV     ++ +G +P+S  Y  +   L + G  
Sbjct: 156 VAQGVVPNGFTYAVLVQSSCYERNSDEAVRFFGEMVDKGFKPSSTLYQKVTECLKATGKE 215

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS---FNQMVSKNCQPDIVTY 400
               ++     E   +  +     L   L  + + D+AI +   F  MV   C+PD   Y
Sbjct: 216 GEFSRVFGRDLEKRVAVEMMLKKAL---LVNFVIQDKAIEASKLFRAMVKSGCKPDATIY 272

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPC-LITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           + ++ A CK   L+EA +L   +   S +P   + +   + GL K G +E+A      M 
Sbjct: 273 SYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNVAWTAFLSGLCKSGKIEQAFEACRTMQ 332

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           E+ +S     +  LI     + ++++A +   EI  R  +  +     VI  LCK+ +VD
Sbjct: 333 ES-LSSSQPVYDMLIRLLIESGRIDKAEEACLEIAGRNIQPSSGTCHSVIQELCKAGRVD 391

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            A+ +LE MI   Y PD    S ++ ++      +EA +  Q +
Sbjct: 392 SALSLLETMIKRGYCPDMATHSMLINELCKADKIQEAQEFLQGM 435



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 91/396 (22%), Positives = 169/396 (42%), Gaps = 46/396 (11%)

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           DV TYN +L  +  +   KQA   ++  + +G  P   TY +L++  C +     A+   
Sbjct: 128 DVFTYNCLLDKLIRHRDLKQAGQVFEKMVAQGVVPNGFTYAVLVQSSCYERNSDEAVRFF 187

Query: 281 DDMAIEGCSPDIVTYNS------------------------------------LVNFSCK 304
            +M  +G  P    Y                                      LVNF   
Sbjct: 188 GEMVDKGFKPSSTLYQKVTECLKATGKEGEFSRVFGRDLEKRVAVEMMLKKALLVNFVI- 246

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP-TVF 363
           Q K  +A  +   ++  G +P++  Y+ ++ +       D   K+   M   S +P    
Sbjct: 247 QDKAIEASKLFRAMVKSGCKPDATIYSYMVLAHCKLENLDEAFKLFLEMAVESKAPLNNV 306

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVS--KNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            +   ++GLCK G +++A  +   M     + QP    Y+ ++  L + G +++A +   
Sbjct: 307 AWTAFLSGLCKSGKIEQAFEACRTMQESLSSSQP---VYDMLIRLLIESGRIDKAEEACL 363

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            + G +  P   T +++I  L K G ++ A+ L   M++ G  PD  TH  LI   C+AD
Sbjct: 364 EIAGRNIQPSSGTCHSVIQELCKAGRVDSALSLLETMIKRGYCPDMATHSMLINELCKAD 423

Query: 482 QVEEAVDLLKEIGKR--GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR-YKPDDT 538
           +++EA + L+ + ++         +Y  +++ LCK+KKV  A  +   M+S R + PD  
Sbjct: 424 KIQEAQEFLQGMDRKISSRSSSCFSYNSLLNSLCKAKKVHQAFAIFSTMVSERSFVPDVV 483

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            +S ++           A KL++++I+       TT
Sbjct: 484 SYSILIDGFCKIDELGRAEKLYKQMIDLNCVPNVTT 519


>gi|224135613|ref|XP_002322117.1| predicted protein [Populus trichocarpa]
 gi|222869113|gb|EEF06244.1| predicted protein [Populus trichocarpa]
          Length = 854

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 220/448 (49%), Gaps = 1/448 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  +C  G L  A  L D+MA     PD      LI GL +  R+E   ++L + 
Sbjct: 309 TFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQRLLLVA 368

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   D + ++  +    K G +   I +   M   G  P+V++ + +++    NG+ 
Sbjct: 369 LDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRI 428

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A G +   L+ G  P ++TY+ LI   CK   +     + +DM  + C PD + Y+ L
Sbjct: 429 LEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVL 488

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CKQG   DA+      ++RG+ PN  T NTLL S     C     K+  +M   + 
Sbjct: 489 INGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNI 548

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TY ILI G  ++G VD A+  F QM+ K+ +PD++TY T++  LCK    +  L 
Sbjct: 549 KADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLC 608

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +  ++ +P +  YN LI+  +++G +E A+ L+  ++E G  PD  T  T+I  +C
Sbjct: 609 IFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYC 668

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              ++++AV L  ++     +     + ++I   C+  ++D A+ +   M+    +P+  
Sbjct: 669 NFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLV 728

Query: 539 VFSTIVK-KVADDGMTEEAYKLWQKLIE 565
            +S ++        M E   KL+ +++E
Sbjct: 729 TYSCLIHGYFKSQSMMESGLKLYNEMLE 756



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 213/437 (48%), Gaps = 4/437 (0%)

Query: 132 KLTDASKLIDIMAR---RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           K+ D  ++I I  R       P+   C  LI+G  +  RI +A  +   ++  G  P  +
Sbjct: 389 KIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSIL 448

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TY+ ++ G CK G +R    L ++M    CEPD I Y+ ++  +   G    A+ F+   
Sbjct: 449 TYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQA 508

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           + +G  P + T   L++  C+   I  A++V   M +     D VTY  L+  + + G+ 
Sbjct: 509 VNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRV 568

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           D+A+++   +L +  +P+ ITY TL+  L       A   I D M + + +P +  YN+L
Sbjct: 569 DEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVL 628

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN   + G ++ A+  F  +V +  +PD+ T+NT++   C    L++A+QL   +     
Sbjct: 629 INMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQL 688

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV-EEAV 487
            P  IT+  LID   ++G M+ AM+++ +M+E G  P+ +T+  LI G+ ++  + E  +
Sbjct: 689 RPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGL 748

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L  E+ +        +Y ++I GLCK   +  A       +     PD   ++ +++  
Sbjct: 749 KLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGY 808

Query: 548 ADDGMTEEAYKLWQKLI 564
              G   EA  L+  ++
Sbjct: 809 CKVGRLTEAMMLYDNML 825



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/478 (24%), Positives = 224/478 (46%), Gaps = 35/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F ++G++    +    + +     D   C  +++G+   + I  A     ++V  G
Sbjct: 243 VMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMVVRIG 302

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +T++ ++   CK G +  A  L D M+ +G  PD+I Y+ ++  +F  G+ +   
Sbjct: 303 PKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRLEDGQ 362

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 L KG    ++ ++  ++   K   + R I++   M  EG SP++V+ + L+   
Sbjct: 363 RLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSILIKGF 422

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G+  +A  +   +L  G EP+ +TY+ L+      G       + + M +    P  
Sbjct: 423 CQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDT 482

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y++LINGLCK GLV  A+  F Q V++   P++ T NT+L + C+   +  A+++ +L
Sbjct: 483 IVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYL 542

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC---- 478
           +   +     +TY  LI G A+ G +++A++L+ QM++    PD IT+ TLI G C    
Sbjct: 543 MGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKK 602

Query: 479 -------------------------------RADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
                                          R   +E A+ L   + +RG K     +  
Sbjct: 603 SSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNT 662

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +I   C  K++D A+Q+   M S + +P+   F+ ++     +G  ++A  ++ K++E
Sbjct: 663 MICCYCNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLE 720



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 98/372 (26%), Positives = 188/372 (50%), Gaps = 1/372 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC  G L D   L + M ++   PD      LI GL +   +  A +     
Sbjct: 449 TYSALIAGFCKSGNLRDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFFFQA 508

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+  T N ++   C+   I  A+ +   M +   + D +TY  +++     G+ 
Sbjct: 509 VNRGLSPNVFTLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRV 568

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  +   L+K   P +ITY  LI+ +CK    +  + + D M     +PDI  YN L
Sbjct: 569 DEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVL 628

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   ++G  + A+ +  +++ RG +P+  T+NT++    +    D   ++   M     
Sbjct: 629 INMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCYCNFKRLDDAVQLFAKMTSEQL 688

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL-GALCKEGMLNEAL 417
            P   T+ ILI+  C+ G +D A+  F++M+ +  +P++VTY+ ++ G    + M+   L
Sbjct: 689 RPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGL 748

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L + +  ++ +P +++Y+ LIDGL K+G M++A   +   ++  + PD I +  LI G+
Sbjct: 749 KLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGY 808

Query: 478 CRADQVEEAVDL 489
           C+  ++ EA+ L
Sbjct: 809 CKVGRLTEAMML 820



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 170/359 (47%), Gaps = 42/359 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L +FC    +  A K+  +M   N   D      LI+G  +  R+++A  +   M
Sbjct: 519 TLNTLLDSFCRLKCIVGAMKVYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQM 578

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +     PD ITY  ++ GLCK  +  + + + D M  +   PD+  YN ++      G  
Sbjct: 579 LKKDFKPDVITYCTLIDGLCKLKKSSAGLCIFDFMCKNAVAPDIAIYNVLINMHSREGHL 638

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR---AIEVLDDMAIEGCSPDIVTY 295
           + A+G +   + +G  P + T+  +I   C  C   R   A+++   M  E   P+ +T+
Sbjct: 639 EAALGLFVHVVERGPKPDVFTFNTMI---CCYCNFKRLDDAVQLFAKMTSEQLRPNAITF 695

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS-LGSRGCWDAVDKILDIMN 354
             L++  C++G+ DDA+L+ + +L  G EPN +TY+ L+H    S+   ++  K+ + M 
Sbjct: 696 TILIDAFCREGRMDDAMLMFSKMLEEGPEPNLVTYSCLIHGYFKSQSMMESGLKLYNEML 755

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E + +P + +Y+ILI+GLCK GL+  A  +F   + K+  PD++ Y  ++   CK G L 
Sbjct: 756 ENNIAPNIVSYSILIDGLCKRGLMKEASCAFRCALDKHLLPDVIAYTILIRGYCKVGRLT 815

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           E                                   AM+LY  M+ N ++PD    RTL
Sbjct: 816 E-----------------------------------AMMLYDNMLLNRLTPDRFLERTL 839



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/356 (25%), Positives = 174/356 (48%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
            Y  ++     +G++   +     +   G   D+IT N IL+ ++       A  ++   
Sbjct: 239 VYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQNDIGVADDYFNMV 298

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +R G  P ++T++ LI+  CK+  + +A  + D MA  G +PD++ Y+ L++   K G+ 
Sbjct: 299 VRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYSILIDGLFKAGRL 358

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           +D   ++   L +G++ + + +++ + +    G    V +I   M     SP V + +IL
Sbjct: 359 EDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNEGISPNVVSCSIL 418

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I G C+ G +  A   F Q++    +P I+TY+ ++   CK G L +   L   +    C
Sbjct: 419 IKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNLRDGFYLYEDMIKKRC 478

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P  I Y+ LI+GL K+G +  A+  + Q +  G+SP+  T  TL+  FCR   +  A+ 
Sbjct: 479 EPDTIVYSVLINGLCKQGLVGDALRFFFQAVNRGLSPNVFTLNTLLDSFCRLKCIVGAMK 538

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +   +G    K     Y ++I G  +  +VD A+ +   M+   +KPD   + T++
Sbjct: 539 VYYLMGMLNIKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLI 594



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 155/342 (45%), Gaps = 43/342 (12%)

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIV--TYNSLVNFSCKQGKYDDAVL 313
           + Y  LIE  C++    +++++   + ++G   SP++V     SL++  C +   D    
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDK--- 224

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
               L S   E     Y  +++   ++G  +   +    + +      + T N ++ G+ 
Sbjct: 225 -YGELCSAMREQPFSVYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIW 283

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
               +  A + FN +V    +P++VT++T++ A CKEG L++A  L  ++ G+  +P LI
Sbjct: 284 MQNDIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLI 343

Query: 434 TYNTLIDGLAKKGCME-----------------------------------KAMVLYGQM 458
            Y+ LIDGL K G +E                                   + + +Y +M
Sbjct: 344 VYSILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRM 403

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           +  GISP+ ++   LI GFC+  ++ EA  L  +I K G +     Y  +I G CKS  +
Sbjct: 404 LNEGISPNVVSCSILIKGFCQNGRILEACGLFVQILKLGFEPSILTYSALIAGFCKSGNL 463

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
                + E MI  R +PD  V+S ++  +   G+  +A + +
Sbjct: 464 RDGFYLYEDMIKKRCEPDTIVYSVLINGLCKQGLVGDALRFF 505



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 70/285 (24%), Positives = 130/285 (45%), Gaps = 1/285 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T   +++     G++ +A  L   M +++  PD      LI GL ++ +     
Sbjct: 548 IKADTVTYTILIKGAAQFGRVDEALMLFFQMLKKDFKPDVITYCTLIDGLCKLKKSSAGL 607

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M  +   PD   YN+++    + G + +A+ L   +   G +PDV T+NT++   
Sbjct: 608 CIFDFMCKNAVAPDIAIYNVLINMHSREGHLEAALGLFVHVVERGPKPDVFTFNTMICCY 667

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            +  +   A+  +     +   P  IT+TILI+  C++  +  A+ +   M  EG  P++
Sbjct: 668 CNFKRLDDAVQLFAKMTSEQLRPNAITFTILIDAFCREGRMDDAMLMFSKMLEEGPEPNL 727

Query: 293 VTYNSLVNFSCK-QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           VTY+ L++   K Q   +  + + N +L   + PN ++Y+ L+  L  RG          
Sbjct: 728 VTYSCLIHGYFKSQSMMESGLKLYNEMLENNIAPNIVSYSILIDGLCKRGLMKEASCAFR 787

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +    P V  Y ILI G CK G +  A+  ++ M+     PD
Sbjct: 788 CALDKHLLPDVIAYTILIRGYCKVGRLTEAMMLYDNMLLNRLTPD 832



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 66/274 (24%), Positives = 127/274 (46%), Gaps = 2/274 (0%)

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDKILD 351
           V Y  L+   C++G +D +V +  ++  +G+  +      LL SL    C +  VDK  +
Sbjct: 168 VVYGFLIESYCRKGMFDKSVDIFMHVCVKGIFVSPNVVYLLLGSLIDSHCVEVIVDKYGE 227

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           + +     P    Y  ++N     G V+  +     +V      DI+T N +L  +  + 
Sbjct: 228 LCSAMREQPFS-VYEFVMNRFMNKGEVEMGLRFHKALVQGGFGLDIITCNKILKGIWMQN 286

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +  A    +++      P ++T++TLID   K+G ++KA VL+  M  NG++PD I + 
Sbjct: 287 DIGVADDYFNMVVRIGPKPNVVTFSTLIDAYCKEGNLDKAFVLFDVMAGNGVTPDLIVYS 346

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            LI G  +A ++E+   LL     +G K+    +   +    K   +   IQ+ + M++ 
Sbjct: 347 ILIDGLFKAGRLEDGQRLLLVALDKGIKLDVVGFSSAMDAYVKIGDLGRVIQIYKRMLNE 406

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              P+    S ++K    +G   EA  L+ ++++
Sbjct: 407 GISPNVVSCSILIKGFCQNGRILEACGLFVQILK 440


>gi|449459086|ref|XP_004147277.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
 gi|449501214|ref|XP_004161309.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Cucumis sativus]
          Length = 908

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 122/447 (27%), Positives = 223/447 (49%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T + +L       K     +L D +      PD +    +++ L  +    KA +++  
Sbjct: 191 RTLSALLNALARIRKFRQVLELFDTLVNAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQ 250

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
              +G     +TYN+ + GLCK  ++  A+ +   +   G + D++TY T++  +    +
Sbjct: 251 AEGNGCSLSIVTYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQE 310

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F+  +    + +  G  P     + LIE + K   I  A E+L+ +   G  P++  YNS
Sbjct: 311 FEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNS 370

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++N  CK GK ++A L+ + +  RG+ PN +TY  L+   G R   D      + M E  
Sbjct: 371 MINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECG 430

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            S TV++YN +IN  CK+G +  A   F +MV K  +P + TY +++   CK+G++ +A 
Sbjct: 431 ISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAF 490

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L H + G   +P  +T+  LI GL +   M +A  L+ +M+E  I P+++T+  LI G 
Sbjct: 491 KLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGH 550

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           CR      A +LL E+ K+G       YR +I GLC + +V  A + +  +     + D+
Sbjct: 551 CREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDE 610

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
             ++ +++    +G  +EA    Q+++
Sbjct: 611 LCYTALLQGFCKEGRIKEALVARQEMV 637



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 127/433 (29%), Positives = 216/433 (49%), Gaps = 8/433 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G +  A KL   M  +   P+      LI GL +I+++ +ASK+   M
Sbjct: 472 TYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEM 531

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V    +P+ +TYN+++ G C+ G    A  LLDEM   G  PD  TY  ++  +   G+ 
Sbjct: 532 VELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRV 591

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A  F  D   K      + YT L++  CK+  I  A+    +M   G   D+V+Y  L
Sbjct: 592 SEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVL 651

Query: 299 VNFSCKQGKYDDAVL--VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           ++ +  Q   +D +L  ++  +  +GM+P+++ Y  L+      G      +   IM   
Sbjct: 652 ISGALNQ---NDRILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGE 708

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            + P   TY  L+NGL K G V+ A   F +M+     P+ +TY   L  L KEG +  A
Sbjct: 709 GYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENA 768

Query: 417 LQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           LQL + +L GS  +   +TYN LI G  + G  ++A  L   M+  G+ PD IT+ T I+
Sbjct: 769 LQLHNAMLQGSFANT--VTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIY 826

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            +C+   V+ A+D+ + + +RG K     +  +IH  C + ++D A+Q+   M+    KP
Sbjct: 827 EYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKP 886

Query: 536 DDTVFSTIVKKVA 548
             + + +++ ++A
Sbjct: 887 TQSTYHSLMVQLA 899



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 116/439 (26%), Positives = 207/439 (47%), Gaps = 3/439 (0%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C   +     +++D M     +P       LI GLI++  IE A ++L  +   G VP+
Sbjct: 305 LCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPN 364

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
              YN M+  LCK G++  A  L   M+  G  P+ +TY  ++       K   A  ++ 
Sbjct: 365 LFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFN 424

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             +  G    + +Y  +I   CK   +  A  +  +M  +G  P + TY SL++  CK G
Sbjct: 425 KMIECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDG 484

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
               A  + + +  +G+ PN++T+  L+  L          K+ D M E    P   TYN
Sbjct: 485 LVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYN 544

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           +LI G C+ G   RA    ++M+ K   PD  TY  ++  LC  G ++EA + ++ L+  
Sbjct: 545 VLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHK 604

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG-FCRADQVEE 485
                 + Y  L+ G  K+G +++A+V   +M+  G+  D +++  LI G   + D++  
Sbjct: 605 HQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRI-- 662

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
             +LL+E+  +G +  N  Y ++I G  KS  +  A +   +MI   Y P+   ++ +V 
Sbjct: 663 LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVN 722

Query: 546 KVADDGMTEEAYKLWQKLI 564
            +   G   EA  L+++++
Sbjct: 723 GLFKAGYVNEAKLLFKRML 741



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 220/485 (45%), Gaps = 47/485 (9%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N ++ + C  GKL +A  L  +MA R   P D  + I LI G  R  +++ A      M+
Sbjct: 369 NSMINSLCKTGKLEEAELLFSVMAERGLNPNDVTYTI-LIDGFGRRAKLDVAFYYFNKMI 427

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G      +YN M+   CK G+++ A  L  EM   G +P V TY +++     +G   
Sbjct: 428 ECGISATVYSYNSMINCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVP 487

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A   + +   KG  P  +T+T LI  +C+   +A A ++ D+M      P+ VTYN L+
Sbjct: 488 KAFKLYHEMTGKGIAPNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLI 547

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C++G    A  +++ ++ +G+ P++ TY  L+  L S G      + ++ ++     
Sbjct: 548 EGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQR 607

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE---- 415
                Y  L+ G CK G +  A+ +  +MV +  Q D+V+Y     A+   G LN+    
Sbjct: 608 LDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSY-----AVLISGALNQNDRI 662

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
             +LL  ++G    P  + Y  LIDG  K G ++KA   +  M+  G  P+ +T+  L+ 
Sbjct: 663 LFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVN 722

Query: 476 GFCRADQVEEAVDLLK-------------------EIGKRGNKMRNS------------- 503
           G  +A  V EA  L K                    + K GN M N+             
Sbjct: 723 GLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGN-MENALQLHNAMLQGSFA 781

Query: 504 ---AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y ++I G C+  K   A ++L++MI     PD   +ST + +    G  + A  +W
Sbjct: 782 NTVTYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMW 841

Query: 561 QKLIE 565
           + +++
Sbjct: 842 ECMLQ 846



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 208/446 (46%), Gaps = 1/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  +   C   ++ +A ++   +  +    D      L+ GL RI   E   +++  M
Sbjct: 262 TYNVFINGLCKSKRVWEAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEM 321

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G VP     + ++ GL K G I  A  LL+++   G  P++  YN+++ ++   GK 
Sbjct: 322 IELGYVPSEAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKL 381

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A   +     +G  P  +TYTILI+   ++  +  A    + M   G S  + +YNS+
Sbjct: 382 EEAELLFSVMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSM 441

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK GK   A L+   ++ +G++P   TY +L+      G      K+   M     
Sbjct: 442 INCQCKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGI 501

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   T+  LI GLC+   +  A   F++MV     P+ VTYN ++   C+EG    A +
Sbjct: 502 APNTVTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFE 561

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +     SP   TY  LI GL   G + +A      +       D++ +  L+ GFC
Sbjct: 562 LLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFC 621

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +++EA+   +E+  RG +M   +Y ++I G        +  ++L  M     +PD+ 
Sbjct: 622 KEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQND-RILFELLREMHGKGMQPDNV 680

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
           +++ ++      G  ++A++ W  +I
Sbjct: 681 IYTILIDGFIKSGNLKKAFEFWYIMI 706



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 204/436 (46%), Gaps = 10/436 (2%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  GK+  A  L   M  +   P      +LI G  +   + KA K+   M   G  P+T
Sbjct: 446 CKFGKMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNT 505

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +T+  ++ GLC+  ++  A  L DEM      P+ +TYN ++      G   +A     +
Sbjct: 506 VTFTALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDE 565

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            ++KG  P   TY  LI  +C    ++ A E ++D+  +    D + Y +L+   CK+G+
Sbjct: 566 MIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGR 625

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH----SPTVF 363
             +A++    ++ RG++ + ++Y  L+      G  +  D+IL  +    H     P   
Sbjct: 626 IKEALVARQEMVGRGLQMDLVSYAVLI-----SGALNQNDRILFELLREMHGKGMQPDNV 680

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
            Y ILI+G  K G + +A   +  M+ +   P+ VTY  ++  L K G +NEA  L   +
Sbjct: 681 IYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRM 740

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P  ITY   +D L K+G ME A+ L+  M++ G   + +T+  LI G+C+  + 
Sbjct: 741 LVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ-GSFANTVTYNILIRGYCQIGKF 799

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA  LL  +   G       Y   I+  CK   VD A+ + E M+    KPD  VF+ +
Sbjct: 800 QEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFL 859

Query: 544 VKKVADDGMTEEAYKL 559
           +     +G  + A +L
Sbjct: 860 IHACCLNGELDRALQL 875



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/450 (24%), Positives = 215/450 (47%), Gaps = 3/450 (0%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E   + +++     G +  A +L++ + +   +P+     ++I  L +  ++E+A  +  
Sbjct: 330 EAAVSGLIEGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFS 389

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
           +M   G  P+ +TY +++ G  +R ++  A    ++M   G    V +YN+++      G
Sbjct: 390 VMAERGLNPNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFG 449

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K K A   +K+ + KG  P + TYT LI   CK   + +A ++  +M  +G +P+ VT+ 
Sbjct: 450 KMKMAELLFKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFT 509

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L+   C+  K  +A  + + ++   + PN +TYN L+      G      ++LD M + 
Sbjct: 510 ALICGLCQINKMAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIKK 569

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             SP  +TY  LI GLC  G V  A    N +  K+ + D + Y  +L   CKEG + EA
Sbjct: 570 GLSPDTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEA 629

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV-LYGQMMENGISPDDITHRTLIW 475
           L     + G      L++Y  LI G   +   ++ +  L  +M   G+ PD++ +  LI 
Sbjct: 630 LVARQEMVGRGLQMDLVSYAVLISGALNQN--DRILFELLREMHGKGMQPDNVIYTILID 687

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GF ++  +++A +    +   G    +  Y  +++GL K+  V+ A  + + M+     P
Sbjct: 688 GFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIP 747

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +   +   +  +  +G  E A +L   +++
Sbjct: 748 NHITYGCFLDHLTKEGNMENALQLHNAMLQ 777



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 202/408 (49%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI+  ++  R+     V+ +M   G +P+  T + ++  L +  + R  + L D +  +G
Sbjct: 161 LIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLVNAG 220

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +PD   Y  +++ + +   F +A          GC   ++TY + I  +CK   +  A+
Sbjct: 221 VKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVWEAV 280

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           EV   +  +G   D+VTY +LV   C+  +++  + +++ ++  G  P+    + L+  L
Sbjct: 281 EVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLIEGL 340

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +   ++L+ + +    P +F YN +IN LCK G ++ A   F+ M  +   P+ 
Sbjct: 341 IKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLNPND 400

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTY  ++    +   L+ A    + +     S  + +YN++I+   K G M+ A +L+ +
Sbjct: 401 VTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELLFKE 460

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M++ G+ P   T+ +LI G+C+   V +A  L  E+  +G       +  +I GLC+  K
Sbjct: 461 MVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQINK 520

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +  A ++ + M+  +  P++  ++ +++    +G T  A++L  ++I+
Sbjct: 521 MAEASKLFDEMVELKILPNEVTYNVLIEGHCREGNTTRAFELLDEMIK 568



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 99/385 (25%), Positives = 191/385 (49%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           ++M++    +  ++   + +++ M   G  P+V T + +L  +    KF+Q +  +   +
Sbjct: 158 FDMLIQHYVQNKRVMDGVLVVNLMRDYGLLPEVRTLSALLNALARIRKFRQVLELFDTLV 217

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
             G  P    YT++++ +C+     +A E+++     GCS  IVTYN  +N  CK  +  
Sbjct: 218 NAGVKPDCYIYTVVVKCLCELKDFNKAKEIINQAEGNGCSLSIVTYNVFINGLCKSKRVW 277

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +AV V  +L  +G++ + +TY TL+  L     ++   +++D M E  + P+    + LI
Sbjct: 278 EAVEVKRSLGEKGLKADLVTYCTLVLGLCRIQEFEVGMEMMDEMIELGYVPSEAAVSGLI 337

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
            GL K G ++ A    N++      P++  YN+++ +LCK G L EA  L  ++     +
Sbjct: 338 EGLIKMGSIEGAFELLNKVGKLGVVPNLFVYNSMINSLCKTGKLEEAELLFSVMAERGLN 397

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  +TY  LIDG  ++  ++ A   + +M+E GIS    ++ ++I   C+  +++ A  L
Sbjct: 398 PNDVTYTILIDGFGRRAKLDVAFYYFNKMIECGISATVYSYNSMINCQCKFGKMKMAELL 457

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            KE+  +G K   + Y  +I G CK   V  A ++   M      P+   F+ ++  +  
Sbjct: 458 FKEMVDKGLKPTVATYTSLISGYCKDGLVPKAFKLYHEMTGKGIAPNTVTFTALICGLCQ 517

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTT 574
                EA KL+ +++E K+     T
Sbjct: 518 INKMAEASKLFDEMVELKILPNEVT 542



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 102/359 (28%), Positives = 169/359 (47%), Gaps = 2/359 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N +++  C  G  T A +L+D M ++   PD +    LI GL    R+ +A + +
Sbjct: 539 NEVTYNVLIEGHCREGNTTRAFELLDEMIKKGLSPDTYTYRPLIAGLCSTGRVSEAKEFI 598

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +       D + Y  ++ G CK G+I+ A+    EM   G + D+++Y  ++    + 
Sbjct: 599 NDLHHKHQRLDELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQ 658

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              +      ++   KG  P  + YTILI+   K   + +A E    M  EG  P+ VTY
Sbjct: 659 ND-RILFELLREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTY 717

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +LVN   K G  ++A L+   +L     PN ITY   L  L   G  +   ++ + M +
Sbjct: 718 TALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAMLQ 777

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            S + TV TYNILI G C+ G    A    + M+     PD +TY+T +   CK G ++ 
Sbjct: 778 GSFANTV-TYNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDA 836

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           A+ +   +      P  + +N LI      G +++A+ L   MM  G+ P   T+ +L+
Sbjct: 837 AMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLM 895



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 92/331 (27%), Positives = 163/331 (49%), Gaps = 2/331 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   CS G++++A + I+ +  ++Q  D      L++G  +  RI++A    
Sbjct: 574 DTYTYRPLIAGLCSTGRVSEAKEFINDLHHKHQRLDELCYTALLQGFCKEGRIKEALVAR 633

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q MV  G   D ++Y +++ G   +   R    LL EM   G +PD + Y  ++     +
Sbjct: 634 QEMVGRGLQMDLVSYAVLISGALNQND-RILFELLREMHGKGMQPDNVIYTILIDGFIKS 692

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  K+A  FW   + +G  P  +TYT L+  + K   +  A  +   M +    P+ +TY
Sbjct: 693 GNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFKAGYVNEAKLLFKRMLVGEAIPNHITY 752

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
              ++   K+G  ++A L ++N + +G   N++TYN L+      G +    K+LD+M  
Sbjct: 753 GCFLDHLTKEGNMENA-LQLHNAMLQGSFANTVTYNILIRGYCQIGKFQEAAKLLDVMIG 811

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TY+  I   CK G VD A++ +  M+ +  +PD V +N ++ A C  G L+ 
Sbjct: 812 IGMVPDCITYSTFIYEYCKRGNVDAAMDMWECMLQRGLKPDRVVFNFLIHACCLNGELDR 871

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           ALQL + +      P   TY++L+  LA++ 
Sbjct: 872 ALQLRNDMMLRGLKPTQSTYHSLMVQLAQRA 902



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 83/301 (27%), Positives = 145/301 (48%), Gaps = 4/301 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRG-LIRIDRIEKASKV 174
           DE     +LQ FC  G++ +A      M  R    D      LI G L + DRI    ++
Sbjct: 609 DELCYTALLQGFCKEGRIKEALVARQEMVGRGLQMDLVSYAVLISGALNQNDRI--LFEL 666

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+ M   G  PD + Y +++ G  K G ++ A      M   G  P+ +TY  ++  +F 
Sbjct: 667 LREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFK 726

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G   +A   +K  L     P  ITY   ++ + K+  +  A+++ + M ++G   + VT
Sbjct: 727 AGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM-LQGSFANTVT 785

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L+   C+ GK+ +A  +++ ++  GM P+ ITY+T ++    RG  DA   + + M 
Sbjct: 786 YNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECML 845

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P    +N LI+  C  G +DRA+   N M+ +  +P   TY++++  L +   L 
Sbjct: 846 QRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRARLT 905

Query: 415 E 415
           +
Sbjct: 906 Q 906



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 63/237 (26%), Positives = 115/237 (48%), Gaps = 1/237 (0%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L    G  ++ D      ++  F   G L  A +   IM     +P+      L+ GL +
Sbjct: 667 LREMHGKGMQPDNVIYTILIDGFIKSGNLKKAFEFWYIMIGEGYVPNSVTYTALVNGLFK 726

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
              + +A  + + M++   +P+ ITY   +  L K G + +A+ L + M + G   + +T
Sbjct: 727 AGYVNEAKLLFKRMLVGEAIPNHITYGCFLDHLTKEGNMENALQLHNAM-LQGSFANTVT 785

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN ++R     GKF++A       +  G  P  ITY+  I + CK+  +  A+++ + M 
Sbjct: 786 YNILIRGYCQIGKFQEAAKLLDVMIGIGMVPDCITYSTFIYEYCKRGNVDAAMDMWECML 845

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
             G  PD V +N L++  C  G+ D A+ + N+++ RG++P   TY++L+  L  R 
Sbjct: 846 QRGLKPDRVVFNFLIHACCLNGELDRALQLRNDMMLRGLKPTQSTYHSLMVQLAQRA 902


>gi|297806115|ref|XP_002870941.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297316778|gb|EFH47200.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 719

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 127/442 (28%), Positives = 217/442 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ F    KL +A +   ++  +        C  LI  L+RI  +E A ++ Q +  SG
Sbjct: 161 LIRTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSG 220

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T N+MV  LCK G++      L E+   G  PD++TYNT++      G  ++A 
Sbjct: 221 VGVNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAF 280

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG  P + TY  +I  +CK     RA EV  +M   G SPD  TY SL+  +
Sbjct: 281 ELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 340

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK+G   +   + +++ SR + P+ + +++++      G  D      + + EA   P  
Sbjct: 341 CKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 400

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y ILI G C+ G++  A+N  N+M+ + C  D+VTYNT+L  LCK  ML EA +L + 
Sbjct: 401 VIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 460

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   T   LIDG  K G ++ AM L+ +M E  I  D +T+ TL+ GF +   
Sbjct: 461 MTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGD 520

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++ A ++  ++  +       ++ ++++ LC    +  A +V + MIS   KP   + ++
Sbjct: 521 IDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMISKSIKPTVMICNS 580

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           ++K     G   +     +K+I
Sbjct: 581 MIKGYCRSGNASDGEIFLEKMI 602



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 232/453 (51%), Gaps = 4/453 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  + S+G + +A +L+  M  +   P  +    +I GL +  + E+A +V 
Sbjct: 259 DIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVF 318

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ SG  PD+ TY  ++   CK+G       +  +M      PD++ +++++     +
Sbjct: 319 AEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRS 378

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+ ++      G  P  + YTILI+  C++  I+ A+ + ++M  +GC+ D+VTY
Sbjct: 379 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTY 438

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++  CK+    +A  + N +  RG+ P+S T   L+      G      ++   M E
Sbjct: 439 NTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKE 498

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 V TYN L++G  K G +D A   +  MVSK   P  ++++ ++ ALC +G L+E
Sbjct: 499 KRIKLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSE 558

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A ++   +   S  P ++  N++I G  + G      +   +M+  G  PD I++ TLI+
Sbjct: 559 AFRVWDEMISKSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIY 618

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           GF + + + +A  L+K++ ++   +      Y  ++HG C+  ++  A  VL  MI    
Sbjct: 619 GFVKEENMSKAFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGV 678

Query: 534 KPDDTVFSTIVKK-VADDGMTEEAYKLWQKLIE 565
            PD + +++++   V+ D +T EA++   ++++
Sbjct: 679 NPDRSTYTSLINGFVSQDNLT-EAFRFHDEMLQ 710



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 206/443 (46%), Gaps = 24/443 (5%)

Query: 130 RGKLTDASKLIDIMARRNQIPDF-HFCINL---IRGLIRIDRIEKASKVLQIMVMSGGVP 185
           R  L+   + +D +      P+F H  ++L   I  L+R  R+  A   +  M+   GV 
Sbjct: 79  RNDLSLGQRFVDQLGF--NFPNFKHTSLSLSAMIHILVRSGRLSDAQSCVLRMIRRSGVS 136

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
                N +V                   + S C  +   ++ ++RT     K ++A   +
Sbjct: 137 RVEIVNSLVS------------------TYSNCGSNDSVFDLLIRTFVQARKLREAYEAF 178

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
                KG    +     LI  + +   +  A  +  +++  G   ++ T N +VN  CK 
Sbjct: 179 TLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVGVNVYTLNIMVNALCKD 238

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           GK +     ++ +  +G+ P+ +TYNTL+ +  S+G  +   +++  M     SP V+TY
Sbjct: 239 GKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFELMHAMPSKGFSPGVYTY 298

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N +INGLCK+G  +RA   F +M+     PD  TY ++L   CK+G   E   +   +  
Sbjct: 299 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDAVETENIFSDMRS 358

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P L+ +++++    + G ++KA++ +  + E G+ PD++ +  LI G+CR   + E
Sbjct: 359 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISE 418

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A++L  E+ ++G  M    Y  ++HGLCK K +  A ++   M      PD    + ++ 
Sbjct: 419 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERGLFPDSYTLTILID 478

Query: 546 KVADDGMTEEAYKLWQKLIEWKV 568
                G  + A +L++K+ E ++
Sbjct: 479 GHCKLGNLQNAMELFKKMKEKRI 501



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 104/389 (26%), Positives = 177/389 (45%), Gaps = 37/389 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L   C +G   +   +   M  R+ +PD     +++    R   ++KA    
Sbjct: 329 DSTTYRSLLMEACKKGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYF 388

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +  +G +PD + Y +++ G C++G I  A+ L +EM   GC  DV+TYNTIL  +   
Sbjct: 389 NSVKEAGLIPDNVIYTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKR 448

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +A   + +   +G  P   T TILI+  CK   +  A+E+   M  +    D+VTY
Sbjct: 449 KMLGEADKLFNEMTERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTY 508

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++   K G  D A  +  +++S+ + P  I+++ L+++L S+G      ++ D M  
Sbjct: 509 NTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMIS 568

Query: 356 ASHSPTVFTYNILINGLCK------------------------------YGLV-----DR 380
            S  PTV   N +I G C+                              YG V      +
Sbjct: 569 KSIKPTVMICNSMIKGYCRSGNASDGEIFLEKMISEGFVPDCISYNTLIYGFVKEENMSK 628

Query: 381 AINSFNQMVSKN--CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           A     +M  K     PD+ TYN++L   C+E  + EA  +L  +     +P   TY +L
Sbjct: 629 AFGLVKKMEEKQGGLVPDVFTYNSILHGFCRENQMKEAEAVLRKMIERGVNPDRSTYTSL 688

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           I+G   +  + +A   + +M++ G SPDD
Sbjct: 689 INGFVSQDNLTEAFRFHDEMLQRGFSPDD 717



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 218/465 (46%), Gaps = 41/465 (8%)

Query: 137 SKLIDIMARRNQIPDFHFCINLIRGLIR--IDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           S +I I+ R  ++ D   C+  +R + R  + R+E  + ++     + G  D++ +++++
Sbjct: 107 SAMIHILVRSGRLSDAQSCV--LRMIRRSGVSRVEIVNSLVSTYS-NCGSNDSV-FDLLI 162

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
               +  ++R A      +   G    +   N ++ ++   G  + A   +++  R G  
Sbjct: 163 RTFVQARKLREAYEAFTLLRSKGYTVSIDACNALIGSLVRIGWVELAWRIYQEISRSGVG 222

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
             + T  I++  +CK   + +    L ++  +G  PDIVTYN+L++    QG  ++A  +
Sbjct: 223 VNVYTLNIMVNALCKDGKMEKVGTFLSEVQEKGVYPDIVTYNTLISAYSSQGLMEEAFEL 282

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           ++ + S+G  P   TYNT+++ L   G ++   ++   M  +  SP   TY  L+   CK
Sbjct: 283 MHAMPSKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 342

Query: 375 YG--------------------LV---------------DRAINSFNQMVSKNCQPDIVT 399
            G                    LV               D+A+  FN +      PD V 
Sbjct: 343 KGDAVETENIFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 402

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  ++   C++GM++EA+ L + +    C+  ++TYNT++ GL K+  + +A  L+ +M 
Sbjct: 403 YTILIQGYCRKGMISEAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 462

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           E G+ PD  T   LI G C+   ++ A++L K++ ++  K+    Y  ++ G  K   +D
Sbjct: 463 ERGLFPDSYTLTILIDGHCKLGNLQNAMELFKKMKEKRIKLDVVTYNTLLDGFGKVGDID 522

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            A ++   M+S    P    FS +V  +   G   EA+++W ++I
Sbjct: 523 TAKEIWADMVSKEILPTPISFSILVNALCSKGHLSEAFRVWDEMI 567


>gi|255575351|ref|XP_002528578.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223531974|gb|EEF33786.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 817

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 140/483 (28%), Positives = 231/483 (47%), Gaps = 36/483 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C   ++ DA K+ D M   N +        LI G  ++  ++ A K+ + M  
Sbjct: 215 NVLIGGLCREKRIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKE 274

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P+ IT+N ++ GLCK  +++ A +LL EM V+G  PD  TY+ +   +        
Sbjct: 275 KSVAPNIITFNSLLSGLCKMRKMKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNG 334

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  ++    KG      T +IL+  +CKQ  + +A E+L      G   D V YN+ VN
Sbjct: 335 AMELYEQATEKGIRINNYTGSILLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVN 394

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ G  + A+L I  + S G+ PNSIT+N+L+         D  ++ +  M E   +P
Sbjct: 395 GYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTP 454

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA---- 416
           +V TYN LI+G  K    DR      QM     +P++V+Y +++  LCK+G + EA    
Sbjct: 455 SVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVL 514

Query: 417 -----------LQLLHLLNGSSC--------------------SPCLITYNTLIDGLAKK 445
                       Q+ ++L   SC                    SP L+TYN LIDGL KK
Sbjct: 515 RDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKK 574

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G + +A     Q+  +G SPD IT+ +LI G+  A  V + + L + +   G K     Y
Sbjct: 575 GKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTY 634

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I G C  + +++  ++   M+     PD  V++ ++   A+ G T++AY L Q +++
Sbjct: 635 HPLISG-CSKEGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLD 693

Query: 566 WKV 568
             +
Sbjct: 694 QGI 696



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 205/432 (47%), Gaps = 34/432 (7%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+ GL +  ++EKA ++L+    +G V D + YN  V G C+ G +  AI  ++ M   G
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P+ IT+N+++    D  +  +A  + K    KG  P + TY  LI+   K C   R  
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCF 476

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++L+ M   G  P++V+Y SL+N  CK GK  +A +V+ +++ RG+ PN+  YN L+   
Sbjct: 477 QILEQMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGS 536

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      +  D M  +  SPT+ TYN+LI+GLCK G +  A +   Q+ S    PD+
Sbjct: 537 CMVGKVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDV 596

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC---------- 447
           +TYN+++      G +++ L L   +      P + TY+ LI G +K+G           
Sbjct: 597 ITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKLYNEM 656

Query: 448 ------------------------MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                                    +KA  L+  M++ GI PD +T+ +LI G  R  ++
Sbjct: 657 LQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKL 716

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
               DL+  +  +    +   Y +++ G C  K    A      M+ + + P+ ++ + +
Sbjct: 717 SNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNEL 776

Query: 544 VKKVADDGMTEE 555
              +  +G  +E
Sbjct: 777 TAGLEQEGRLQE 788



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 194/400 (48%), Gaps = 4/400 (1%)

Query: 159 IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
           I+  +++  ++   + L  M   G  P+   YN+++GGLC+  +IR A  + DEM     
Sbjct: 183 IQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDEMCNINL 242

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
              ++TYNT++      G+   A    +    K   P +IT+  L+  +CK   +  A  
Sbjct: 243 VGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRKMKEARS 302

Query: 279 VLDDMAIEGCSPDIVTYNSLVN--FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           +L +M + G  PD  TY+ L +    C  G  + A+ +      +G+  N+ T + LL+ 
Sbjct: 303 LLKEMEVNGFMPDGYTYSILFDGLLRCDDG--NGAMELYEQATEKGIRINNYTGSILLNG 360

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L  +G  +  ++IL    E         YN  +NG C+ G +++AI +  +M S   +P+
Sbjct: 361 LCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPN 420

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            +T+N+++   C    +++A + +  +     +P + TYNTLIDG  K    ++   +  
Sbjct: 421 SITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILE 480

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           QM E G+ P+ +++ +LI   C+  ++ EA  +L+++  RG       Y ++I G C   
Sbjct: 481 QMEEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVG 540

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           KV  A++  + M+ S   P    ++ ++  +   G   EA
Sbjct: 541 KVKDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEA 580



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 96/379 (25%), Positives = 180/379 (47%), Gaps = 1/379 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC   ++  A + +  MA +   P       LI G  ++   ++  ++L+ M
Sbjct: 423 TFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQM 482

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ ++Y  ++  LCK G+I  A  +L +M   G  P+   YN ++      GK 
Sbjct: 483 EEIGVKPNVVSYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKV 542

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K A+ F+ + +R    P L+TY +LI+ +CK+  +  A + L  +   G SPD++TYNSL
Sbjct: 543 KDALRFFDEMMRSEISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSL 602

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++     G     + +   + + G++P   TY+ L+      G  + V+K+ + M + + 
Sbjct: 603 ISGYANAGNVSKCLGLYETMKNLGIKPTVRTYHPLISGCSKEGI-ELVEKLYNEMLQMNL 661

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    YN +I+   + G   +A +    M+ +   PD +TYN+++    +EG L+    
Sbjct: 662 LPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKD 721

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L++ +     +P   TY+ L+ G         A V Y +M+EN   P+      L  G  
Sbjct: 722 LVNNMKAKELAPKADTYDILVKGHCDLKDFSGAYVWYREMVENNFLPNASICNELTAGLE 781

Query: 479 RADQVEEAVDLLKEIGKRG 497
           +  +++E   +  E+  +G
Sbjct: 782 QEGRLQEVQVICSEMNVKG 800



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 103/373 (27%), Positives = 172/373 (46%), Gaps = 9/373 (2%)

Query: 112 FVEN----DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           F EN    DE   N  +  +C  G +  A   I+ M      P+     +LI     +  
Sbjct: 377 FTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFGLRPNSITFNSLIDKFCDMKE 436

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           ++KA + ++ M   G  P   TYN ++ G  K         +L++M   G +P+V++Y +
Sbjct: 437 MDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCFQILEQMEEIGVKPNVVSYGS 496

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +GK  +A    +D + +G  P    Y +LI+  C    +  A+   D+M    
Sbjct: 497 LINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLIDGSCMVGKVKDALRFFDEMMRSE 556

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
            SP +VTYN L++  CK+GK  +A   +  + S G  P+ ITYN+L+    + G      
Sbjct: 557 ISPTLVTYNVLIDGLCKKGKLTEAEDFLTQITSSGHSPDVITYNSLISGYANAGNVSKCL 616

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYG--LVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
            + + M      PTV TY+ LI+G  K G  LV++    +N+M+  N  PD V YN ++ 
Sbjct: 617 GLYETMKNLGIKPTVRTYHPLISGCSKEGIELVEKL---YNEMLQMNLLPDRVVYNAMIH 673

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
              + G   +A  L   +      P  +TYN+LI G  ++G +     L   M    ++P
Sbjct: 674 CYAEIGNTQKAYSLHQGMLDQGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAP 733

Query: 466 DDITHRTLIWGFC 478
              T+  L+ G C
Sbjct: 734 KADTYDILVKGHC 746



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 110/444 (24%), Positives = 202/444 (45%), Gaps = 6/444 (1%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C    L +A +L + M R  ++P       L   L+   +  K   +   +  SG   DT
Sbjct: 117 CKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFMEIENSGFRTDT 176

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
             Y   +    K   ++  +  LD M   G  P+V  YN ++  +    + + A   + +
Sbjct: 177 FMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREKRIRDAEKMFDE 236

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
                    ++TY  LI+  CK   +  A ++ + M  +  +P+I+T+NSL++  CK  K
Sbjct: 237 MCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSVAPNIITFNSLLSGLCKMRK 296

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
             +A  ++  +   G  P+  TY+ L   L      +   ++ +   E       +T +I
Sbjct: 297 MKEARSLLKEMEVNGFMPDGYTYSILFDGLLRCDDGNGAMELYEQATEKGIRINNYTGSI 356

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           L+NGLCK G V++A     +        D V YNT +   C+ G +N+A+  +  +    
Sbjct: 357 LLNGLCKQGKVEKAEEILKKFTENGLVADEVIYNTFVNGYCRIGDMNKAILTIERMESFG 416

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF---CRADQVE 484
             P  IT+N+LID       M+KA     +M E G++P   T+ TLI G+   C  D+  
Sbjct: 417 LRPNSITFNSLIDKFCDMKEMDKAEEWVKKMAEKGVTPSVETYNTLIDGYGKLCTFDRCF 476

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           + ++ ++EIG + N +   +Y  +I+ LCK  K+  A  VL  MI     P+  V++ ++
Sbjct: 477 QILEQMEEIGVKPNVV---SYGSLINCLCKDGKILEAEIVLRDMICRGVLPNAQVYNMLI 533

Query: 545 KKVADDGMTEEAYKLWQKLIEWKV 568
                 G  ++A + + +++  ++
Sbjct: 534 DGSCMVGKVKDALRFFDEMMRSEI 557



 Score = 52.0 bits (123), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 87/228 (38%), Gaps = 13/228 (5%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           IT   H P            D  T N ++  + + G ++    L + M      P     
Sbjct: 587 ITSSGHSP------------DVITYNSLISGYANAGNVSKCLGLYETMKNLGIKPTVRTY 634

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
             LI G  + + IE   K+   M+    +PD + YN M+    + G  + A +L   M  
Sbjct: 635 HPLISGCSK-EGIELVEKLYNEMLQMNLLPDRVVYNAMIHCYAEIGNTQKAYSLHQGMLD 693

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G  PD +TYN+++   F  GK         +   K   P   TY IL++  C     + 
Sbjct: 694 QGIHPDKMTYNSLILGHFREGKLSNIKDLVNNMKAKELAPKADTYDILVKGHCDLKDFSG 753

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           A     +M      P+    N L     ++G+  +  ++ + +  +G+
Sbjct: 754 AYVWYREMVENNFLPNASICNELTAGLEQEGRLQEVQVICSEMNVKGI 801



 Score = 42.7 bits (99), Expect = 0.46,   Method: Compositional matrix adjust.
 Identities = 36/172 (20%), Positives = 77/172 (44%)

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           I   + +L   CK  ML EA++L   +      P L++ + L   L  +    K + L+ 
Sbjct: 106 ITLSDMLLSVCCKSKMLREAVELYEFMRRDGKLPSLVSLSLLFSCLVNEKQFVKVVDLFM 165

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           ++  +G   D   +   I    +   ++  ++ L  + KRG +     Y ++I GLC+ K
Sbjct: 166 EIENSGFRTDTFMYAKAIQAAVKLQNLKMGMEFLDSMRKRGVRPNVFIYNVLIGGLCREK 225

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++  A ++ + M +         ++T++      G  + A+K+ +++ E  V
Sbjct: 226 RIRDAEKMFDEMCNINLVGSIVTYNTLIDGYCKVGELDAAFKMRERMKEKSV 277


>gi|242096872|ref|XP_002438926.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
 gi|241917149|gb|EER90293.1| hypothetical protein SORBIDRAFT_10g028420 [Sorghum bicolor]
          Length = 924

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 134/466 (28%), Positives = 226/466 (48%), Gaps = 1/466 (0%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           +G  +  D  T + +++ +C    L  A K+++ M       +      LI GL R   I
Sbjct: 235 EGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAI 294

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E+A    + M   G VPD  TY  ++ GLCKRG+   A  LLDEMS +G  P+V+ Y+T+
Sbjct: 295 EEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTL 354

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G   +A    K+    G  P  ITY  LI  +CK   + RA  +L  M   G 
Sbjct: 355 IDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGY 414

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             D +TYN ++    +Q   ++A L++N +   G+ PN  TY+ +++ L   G  +    
Sbjct: 415 MADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASG 474

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L+ M      P  F Y  LI+G C+ G    A  +  +M  +N  PD+  YN+++  L 
Sbjct: 475 LLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLS 534

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G ++EA++    +      P   TY  LI G +  G +EKA  L  QM+ +G++P+D 
Sbjct: 535 NVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDF 594

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            +  ++ G+ ++D +E+    LK + ++G    N  Y +VIH L  S  +  A+ VL ++
Sbjct: 595 IYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVI 654

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             +   PD  ++ +++         E+A  L  ++ + K  E G +
Sbjct: 655 EKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAK-KGIEPGIS 699



 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 219/444 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++  F  +G   +A K++  M+     P+     NLIRGL ++ R+ +AS++L+ M  
Sbjct: 352 STLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTK 411

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G + DT+TYN+++ G  ++     A  LL+EM   G  P+V TY+ I+  +   G+ ++
Sbjct: 412 IGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESER 471

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A G  +  +  G  P    Y  LI   C++   + A E L  M  E  +PD+  YNSL+ 
Sbjct: 472 ASGLLEQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLII 531

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                GK D+A+   + +L +G +PN  TY  L+H     G  +  +++L  M  +  +P
Sbjct: 532 GLSNVGKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNP 591

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             F Y  ++ G  K   +++  ++   M+ K   PD   Y  V+  L   G +  A+ +L
Sbjct: 592 NDFIYAQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVL 651

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            ++  +   P  + Y +LI G  K   MEKA+ L  +M + GI P    +  LI GFC++
Sbjct: 652 SVIEKNGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKS 711

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           D +  A ++   I  +G       Y  +I G CK+  +  AI +   M++    PD  V+
Sbjct: 712 DDISHARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVY 771

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           S +    ++ G  ++A  + +++I
Sbjct: 772 SVLAAGCSNSGDLQQALFITEEMI 795



 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 126/469 (26%), Positives = 231/469 (49%), Gaps = 35/469 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +   G++ D ++++ +M      P    C  L++ L+R D ++   KV   M  +G
Sbjct: 179 LVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNGLLKDLLRADALDLLWKVRGFMEGAG 238

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY+ ++   CK   + SA  +++EM  +GC  +V+TYNT++  +   G  ++A 
Sbjct: 239 ISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETGCSLNVVTYNTLIGGLCRAGAIEEAF 298

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G+ K+    G  P   TY  +I  +CK+    +A  +LD+M+  G  P++V Y++L++  
Sbjct: 299 GYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAKCLLDEMSCAGLMPNVVVYSTLIDGF 358

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH---- 358
            +QG  D+A  ++  + + G++PN ITY+ L+  L   G      +IL  M +  +    
Sbjct: 359 MRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGLCKLGRMGRASRILKQMTKIGYMADT 418

Query: 359 -------------------------------SPTVFTYNILINGLCKYGLVDRAINSFNQ 387
                                          SP V+TY+I+INGLC+ G  +RA     Q
Sbjct: 419 MTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLLEQ 478

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M++   +P+   Y  ++   C+EG  + A + L  +   + +P L  YN+LI GL+  G 
Sbjct: 479 MIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNVGK 538

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           M++A+  Y +M+E G  P+D T+  LI G+  A  +E+A  LL ++   G    +  Y  
Sbjct: 539 MDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQ 598

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           ++ G  KS  ++     L+ M+     PD+ ++  ++  ++  G  + A
Sbjct: 599 ILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAA 647



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/462 (24%), Positives = 220/462 (47%), Gaps = 1/462 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +++    +    +A  L++ M +    P+ +    +I GL +I   E+AS +L
Sbjct: 417 DTMTYNLVIEGHLRQHNKEEAFLLLNEMRKGGISPNVYTYSIIINGLCQIGESERASGLL 476

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  P+   Y  ++ G C+ G    A   L +M+     PD+  YN+++  + + 
Sbjct: 477 EQMIADGLKPNAFVYAPLISGYCREGSFSLACETLKKMTRENLTPDLYCYNSLIIGLSNV 536

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +AI ++ + L KG  P   TY  LI        + +A ++L  M   G +P+   Y
Sbjct: 537 GKMDEAIEYYDEMLEKGFQPNDFTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIY 596

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             ++    K    +     + ++L +G+ P++  Y  ++H+L S G   A   +L ++ +
Sbjct: 597 AQILEGYFKSDNLEKVSSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEK 656

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    Y  LI+G CK   +++A+   ++M  K  +P I  YN ++   CK   ++ 
Sbjct: 657 NGLVPDSLIYGSLISGFCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISH 716

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  + + +      P  +TY TLIDG  K G +  A+ LY +M+  G++PD   +  L  
Sbjct: 717 ARNIFNSIICKGLPPNCVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVLAA 776

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G   +  +++A+ + +E+  RG  +  S++  ++HG CK  K+   ++ L +M+     P
Sbjct: 777 GCSNSGDLQQALFITEEMIARGYAII-SSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVP 835

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
                  IV  + + G   EA+ ++ +L +     + T  L+
Sbjct: 836 SLLTVENIVIGLGEAGKLSEAHTIFVELQQKNASHRDTDHLS 877



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 91/375 (24%), Positives = 176/375 (46%), Gaps = 31/375 (8%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F  ND  T   ++  +   G L  A +L+  M      P+      ++ G  + D +EK 
Sbjct: 554 FQPND-FTYGGLIHGYSMAGNLEKAEQLLHQMLNSGLNPNDFIYAQILEGYFKSDNLEKV 612

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           S  L+ M+  G +PD   Y +++  L   G +++A+++L  +  +G  PD + Y +++  
Sbjct: 613 SSTLKSMLEKGLMPDNRLYGIVIHNLSSSGHMQAAVSVLSVIEKNGLVPDSLIYGSLISG 672

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
                  ++A+G   +  +KG  P +  Y  LI+  CK   I+ A  + + +  +G  P+
Sbjct: 673 FCKAADMEKAVGLLDEMAKKGIEPGISCYNALIDGFCKSDDISHARNIFNSIICKGLPPN 732

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD--KI 349
            VTY +L++  CK G   DA+ + N +L+ G+ P++  Y+ L     + GC ++ D  + 
Sbjct: 733 CVTYTTLIDGYCKAGDIRDAIDLYNEMLTEGVAPDAFVYSVL-----AAGCSNSGDLQQA 787

Query: 350 LDIMNE--ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           L I  E  A     + ++N L++G CK G +   +   + M+ K+  P ++T   ++  L
Sbjct: 788 LFITEEMIARGYAIISSFNTLVHGFCKRGKLQETVKFLHVMMDKDIVPSLLTVENIVIGL 847

Query: 408 CKEGMLNEALQLLHLLNGSSCS--------------------PCLITYNTLIDGLAKKGC 447
            + G L+EA  +   L   + S                    P  + +N +I    K+G 
Sbjct: 848 GEAGKLSEAHTIFVELQQKNASHRDTDHLSSLFTDMINQGLVPLDVIHN-MIQSHCKQGY 906

Query: 448 MEKAMVLYGQMMENG 462
           ++KA++L+  ++  G
Sbjct: 907 LDKALMLHDALVAKG 921



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 94/351 (26%), Positives = 157/351 (44%), Gaps = 19/351 (5%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           ++ S   PD   +  +  ++   G + QA G     +R    P L+  ++          
Sbjct: 113 LAPSAPAPDAFAHLAV--SLCAAGLYPQANGLLDQMIRAYPTPPLVLSSV---------- 160

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
             RA+   D    +G  P  V  + LV+   K G+  D   V+  +   G+ P+    N 
Sbjct: 161 -HRALSGSD----QGRRP--VVLDVLVDTYKKTGRVRDGAEVVLLMKDLGLAPSLRCCNG 213

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           LL  L      D + K+   M  A  SP V+TY+ LI   CK   ++ A     +M    
Sbjct: 214 LLKDLLRADALDLLWKVRGFMEGAGISPDVYTYSTLIEAYCKVRDLESAKKVVEEMRETG 273

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C  ++VTYNT++G LC+ G + EA      +      P   TY  +I+GL K+G  ++A 
Sbjct: 274 CSLNVVTYNTLIGGLCRAGAIEEAFGYKKEMEDYGLVPDGFTYGAIINGLCKRGRPDQAK 333

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  +M   G+ P+ + + TLI GF R    +EA  ++KE+   G +     Y  +I GL
Sbjct: 334 CLLDEMSCAGLMPNVVVYSTLIDGFMRQGNADEAFKIVKEMSAAGVQPNKITYDNLIRGL 393

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           CK  ++  A ++L+ M    Y  D   ++ +++        EEA+ L  ++
Sbjct: 394 CKLGRMGRASRILKQMTKIGYMADTMTYNLVIEGHLRQHNKEEAFLLLNEM 444


>gi|115482788|ref|NP_001064987.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|22165069|gb|AAM93686.1| putative leaf protein [Oryza sativa Japonica Group]
 gi|31432904|gb|AAP54480.1| Rf1 protein, mitochondrial precursor, putative [Oryza sativa
           Japonica Group]
 gi|113639596|dbj|BAF26901.1| Os10g0501700 [Oryza sativa Japonica Group]
 gi|125575306|gb|EAZ16590.1| hypothetical protein OsJ_32064 [Oryza sativa Japonica Group]
          Length = 454

 Score =  212 bits (540), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 221/433 (51%), Gaps = 4/433 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N I+      G +  A      M  R   PD     ++I  L +   +++A +VL
Sbjct: 10  DVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQAMDRAMEVL 69

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +MVM    P+  TYN ++ G C  GQ   AI +  +M   G EPDV+TYN+++  +  N
Sbjct: 70  TVMVM----PNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYNSLMDYLCKN 125

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A   +   +++G  P + TY  L+     +  +    ++L  M   G   D   +
Sbjct: 126 GKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQNGMQLDHHVF 185

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+    KQ K D+ VLV + +  +G+ PN++ Y T++  L   G  D      + M +
Sbjct: 186 NILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDAMLNFEQMID 245

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P V  Y  LI+ LC Y   ++A     +++ +   P+IV +NT+L +LCKEG + E
Sbjct: 246 KGLTPNVVVYTSLIHALCTYDKWEKAEELIFEILDQGINPNIVFFNTILDSLCKEGRVIE 305

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           + +L  LL     +P +ITY+TLIDG    G M+ AM L   M+  G+ PD +T+ TLI 
Sbjct: 306 SKKLFDLLGHIGVNPDVITYSTLIDGYCLAGKMDGAMKLLTGMVSVGLKPDSVTYSTLIN 365

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+C+ +++E+A+ L KE+   G       Y +++HGL ++++   A ++   +  S  + 
Sbjct: 366 GYCKINRMEDALALFKEMESNGVNPDIITYNIILHGLFRTRRTAAAKELYARITESGTQL 425

Query: 536 DDTVFSTIVKKVA 548
           + + ++ I+   A
Sbjct: 426 ELSTYNIILMDFA 438



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 88/293 (30%), Positives = 157/293 (53%), Gaps = 14/293 (4%)

Query: 283 MAIEG-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           MA +G C PD+V+YN++++   K+G  D A +  + +L R + P+++TYN+++ +L    
Sbjct: 1   MADDGRCPPDVVSYNTIIDGLFKEGDVDKAYITYHEMLDRRVSPDAVTYNSIIAALSKAQ 60

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             D   ++L +M      P  FTYN +++G C  G  ++AI  F +M S   +PD+VTYN
Sbjct: 61  AMDRAMEVLTVMV----MPNCFTYNSIMHGYCSSGQSEKAIGIFRKMCSDGIEPDVVTYN 116

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           +++  LCK G   EA ++   +      P + TY TL+ G A KG + +   L   M++N
Sbjct: 117 SLMDYLCKNGKCTEARKIFDSMVKRGLKPDITTYGTLLHGYASKGALVEMHDLLALMVQN 176

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G+  D      LI  + + ++V+E V +  ++ ++G       YR VI GLCK  ++D A
Sbjct: 177 GMQLDHHVFNILICAYTKQEKVDEVVLVFSKMRQQGLTPNAVNYRTVIDGLCKLGRLDDA 236

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE--WKVFEKG 572
           +   E MI     P+  V+++++  +         Y  W+K  E  +++ ++G
Sbjct: 237 MLNFEQMIDKGLTPNVVVYTSLIHALC-------TYDKWEKAEELIFEILDQG 282


>gi|224095732|ref|XP_002310456.1| predicted protein [Populus trichocarpa]
 gi|222853359|gb|EEE90906.1| predicted protein [Populus trichocarpa]
          Length = 721

 Score =  212 bits (539), Expect = 4e-52,   Method: Compositional matrix adjust.
 Identities = 122/408 (29%), Positives = 212/408 (51%), Gaps = 20/408 (4%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           N  R L  I + EKA  V++ M+  G +PDT TY+ ++G LC   ++  A  L  EM  +
Sbjct: 192 NFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLFQEMKRN 251

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  PDV  Y T++ +    G  +QA  ++ +  R GC P ++TYT LI    K   +++A
Sbjct: 252 GIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKSRKVSKA 311

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME-PNSITYNTLLH 335
            EV + M  +GC+P+IVTY +L++  CK GK + A  +   +    +E P+         
Sbjct: 312 NEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPD--------- 362

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                     VD    +++ AS+ P VFTY  L++GLCK   V  A +    M  + C+P
Sbjct: 363 ----------VDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEP 412

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           + V Y+ ++   CK G L+EA ++   +      P + TY++LID L K   ++ A+ + 
Sbjct: 413 NHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVL 472

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M+EN  +P+ + +  +I G C+  + +EA  L+  + ++G       Y  +I G  KS
Sbjct: 473 SKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKS 532

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +V+  +++L+ M S    P+   +  ++      G+ +EA+KL +++
Sbjct: 533 GRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEM 580



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 138/515 (26%), Positives = 231/515 (44%), Gaps = 64/515 (12%)

Query: 110 GPFVENDEKTNNKILQNF----CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRI 165
           G  +E     N   + NF    C  GK   A  +I  M  +  IPD      +I  L   
Sbjct: 176 GEMLEAGVVLNKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNA 235

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
            ++EKA ++ Q M  +G  PD   Y  ++   CK G I  A    DEM   GC P+V+TY
Sbjct: 236 SKVEKAFQLFQEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTY 295

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV------ 279
             ++     + K  +A   ++  L KGC P ++TYT LI+ +CK   I +A ++      
Sbjct: 296 TALIHAYLKSRKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKK 355

Query: 280 ----------------------------------------------LDDMAIEGCSPDIV 293
                                                         L  M++EGC P+ V
Sbjct: 356 ENVEIPDVDMHFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHV 415

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y++L++  CK GK D+A  V   +L  G +PN  TY++L+  L      D   K+L  M
Sbjct: 416 VYDALIDGCCKAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKM 475

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E S +P V  Y  +I+GLCK G  D A      M  K C P++VTY  ++    K G +
Sbjct: 476 LENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMVMMEEKGCNPNVVTYTAMIDGFGKSGRV 535

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            + L+LL  ++   C+P  +TY  LI+     G +++A  L  +M +         +R +
Sbjct: 536 EKCLELLQQMSSKGCAPNFVTYRVLINHCCSTGLLDEAHKLLEEMKQTYWPRHVAGYRKV 595

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I GF R  +   ++ L  EI +  +      YR++I    K+ ++++A+++ E +  S +
Sbjct: 596 IEGFNR--EFIASLYLSFEISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEEL--SSF 651

Query: 534 KP----DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            P    +  +  T+++ ++     ++A++L+  +I
Sbjct: 652 SPFSAANQNIHITLIENLSLAHKADKAFELYADMI 686



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 225/472 (47%), Gaps = 25/472 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T      + C  GK  +A  L++   +   +PD      +I GL      E+A   L
Sbjct: 9   DEFTLGCFAHSLCKSGKWREALSLLE---KEEFVPDTVLYTKMISGLCEASLFEEAMDFL 65

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  S  +P+ +TY +++ G   + ++     +L  M   GC P    +N+++     +
Sbjct: 66  TRMRASSCLPNVLTYRILLCGCLNKEKLGRCKRILSMMITEGCYPSPRIFNSLVHAYCRS 125

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G +  A    K  ++ GC P  + Y ILI  +C      + +  L + A        V  
Sbjct: 126 GDYAYAYKLLKKMVQCGCQPGYVVYNILIGGICSSEEPGKDVLDLAEKAYGEMLEAGVVL 185

Query: 296 N--SLVNFS---CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           N  ++ NFS   C  GK++ A  VI  ++S+G  P++ TY+ ++  L +    +   ++ 
Sbjct: 186 NKVNISNFSRCLCGIGKFEKAYNVIREMMSKGFIPDTSTYSKVIGYLCNASKVEKAFQLF 245

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M     +P V+ Y  LI+  CK G +++A N F++M    C P++VTY  ++ A  K 
Sbjct: 246 QEMKRNGIAPDVYVYTTLIDSFCKAGFIEQARNWFDEMERDGCAPNVVTYTALIHAYLKS 305

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS------ 464
             +++A ++  ++    C+P ++TY  LIDGL K G +EKA  +Y  M +  +       
Sbjct: 306 RKVSKANEVYEMMLSKGCTPNIVTYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDM 365

Query: 465 -----------PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
                      P+  T+  L+ G C+A QV+EA DLLK +   G +  +  Y  +I G C
Sbjct: 366 HFRVVDGASNEPNVFTYGALVDGLCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCC 425

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K+ K+D A +V   M+   Y P+   +S+++ ++  D   + A K+  K++E
Sbjct: 426 KAGKLDEAQEVFTTMLECGYDPNVYTYSSLIDRLFKDKRLDLALKVLSKMLE 477



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 104/431 (24%), Positives = 175/431 (40%), Gaps = 95/431 (22%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRN-QIPD--FHFCI--------------NLIRG 161
           T   ++   C  GK+  AS++  IM + N +IPD   HF +               L+ G
Sbjct: 329 TYTALIDGLCKAGKIEKASQIYKIMKKENVEIPDVDMHFRVVDGASNEPNVFTYGALVDG 388

Query: 162 LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
           L +  ++++A  +L+ M + G  P+ + Y+ ++ G CK G++  A  +   M   G +P+
Sbjct: 389 LCKAYQVKEARDLLKSMSVEGCEPNHVVYDALIDGCCKAGKLDEAQEVFTTMLECGYDPN 448

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLR------------------------------- 250
           V TY++++  +F + +   A+      L                                
Sbjct: 449 VYTYSSLIDRLFKDKRLDLALKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMV 508

Query: 251 ----KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
               KGC P ++TYT +I+   K   + + +E+L  M+ +GC+P+ VTY  L+N  C  G
Sbjct: 509 MMEEKGCNPNVVTYTAMIDGFGKSGRVEKCLELLQQMSSKGCAPNFVTYRVLINHCCSTG 568

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             D+A                                    K+L+ M +      V  Y 
Sbjct: 569 LLDEA-----------------------------------HKLLEEMKQTYWPRHVAGYR 593

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +I G  +  +    + SF ++   +  P    Y  ++    K G L  AL+L   L  S
Sbjct: 594 KVIEGFNREFIASLYL-SF-EISENDSVPVAPVYRVLIDNFIKAGRLEIALELNEEL--S 649

Query: 427 SCSPCLIT----YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           S SP        + TLI+ L+     +KA  LY  M+  G  P+      LI G  R ++
Sbjct: 650 SFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVNR 709

Query: 483 VEEAVDLLKEI 493
            EEA+ LL  I
Sbjct: 710 WEEALQLLDSI 720



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 21/69 (30%), Positives = 38/69 (55%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           SS  PF   ++  +  +++N     K   A +L   M  R  IP+    ++LI+GL+R++
Sbjct: 649 SSFSPFSAANQNIHITLIENLSLAHKADKAFELYADMISRGSIPELSILVHLIKGLLRVN 708

Query: 167 RIEKASKVL 175
           R E+A ++L
Sbjct: 709 RWEEALQLL 717


>gi|356561716|ref|XP_003549125.1| PREDICTED: pentatricopeptide repeat-containing protein At1g62930,
           chloroplastic-like [Glycine max]
          Length = 556

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 126/452 (27%), Positives = 239/452 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  T N ++  FC  G++T +  ++  + +R   PD      LI+GL     ++KA 
Sbjct: 100 ITSDLVTLNILINCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKAL 159

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K    +V      D I+Y  ++ GLCK G+ ++AI L+  +     +PDV+ YN I+ ++
Sbjct: 160 KFHDDVVALEFQLDRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSL 219

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N    +A   + +   K   P ++TYT LI   C    +  A+ +L++M ++  +PD+
Sbjct: 220 CKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDV 279

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T++ L++   K+GK   A +V+  ++   ++P+ +TYN+L+              + + 
Sbjct: 280 YTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNS 339

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M ++  +P V +Y I+I+GLCK  +VD AI+ F +M  KN  P+ +T+N+++  LCK G 
Sbjct: 340 MAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGR 399

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +     L+  +   S    +ITY++LID L K   +++A+ L+ +M+   I PD  T+  
Sbjct: 400 IAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTI 459

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C+  +++ A ++ + +  +G  +    Y ++I G CK+   D A+ +L  M  + 
Sbjct: 460 LIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNG 519

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+   F  I+  + +    ++A KL +++I
Sbjct: 520 CIPNAITFDIIICALFEKDENDKAEKLLREMI 551



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 105/358 (29%), Positives = 184/358 (51%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A+AL + M +    P    +N IL ++    +F  AI   K    KG    L+T  ILI 
Sbjct: 53  AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILIN 112

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             C    I  +  VL  +   G  PD++T  +L+   C +G+   A+   +++++   + 
Sbjct: 113 CFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL 172

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           + I+Y TL++ L   G   A  +++  + E S  P V  YNI+I+ LCK  LV  A N +
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLY 232

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           ++M +K   P++VTY T++   C  G L EA+ LL+ +   + +P + T++ LID L K+
Sbjct: 233 SEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKE 292

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G M+ A ++   MM+  + PD +T+ +L+ G+   ++V+ A  +   + + G      +Y
Sbjct: 293 GKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSY 352

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            ++I GLCK+K VD AI + E M      P+   F++++  +   G     + L  K+
Sbjct: 353 TIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKM 410



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/392 (26%), Positives = 199/392 (50%), Gaps = 2/392 (0%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M++    P T  +N ++  L K  +  +AI+L   +   G   D++T N ++      G+
Sbjct: 60  MLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILINCFCHLGQ 119

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              +       L++G  P +IT T LI+ +C +  + +A++  DD+       D ++Y +
Sbjct: 120 ITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQLDRISYGT 179

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK G+   A+ ++ NL  R ++P+ + YN ++ SL           +   MN   
Sbjct: 180 LINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQ 239

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TY  LI G C  G +  A+   N+M  KN  PD+ T++ ++ AL KEG +  A 
Sbjct: 240 IYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAK 299

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L ++  +   P ++TYN+L+DG      ++ A  ++  M ++G++P   ++  +I G 
Sbjct: 300 IVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGL 359

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           C+   V+EA+ L +E+ K  N + N+  +  +I GLCKS ++     +++ M       D
Sbjct: 360 CKTKMVDEAISLFEEM-KHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLAD 418

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              +S+++  +  +   ++A  L++K+I  ++
Sbjct: 419 VITYSSLIDALCKNCHLDQAIALFKKMITQEI 450



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 109/386 (28%), Positives = 187/386 (48%), Gaps = 8/386 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  +   ++   C  G+   A +L+  +  R+  PD      +I  L +   + +A  + 
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLY 232

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M      P+ +TY  ++ G C  G +  A+ALL+EM +    PDV T++ ++  +   
Sbjct: 233 SEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAVALLNEMKLKNINPDVYTFSILIDALGKE 292

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK K A       ++    P ++TY  L++       +  A  V + MA  G +P + +Y
Sbjct: 293 GKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSY 352

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG----CWDAVDKILD 351
             +++  CK    D+A+ +   +  + + PN+IT+N+L+  L   G     WD VDK   
Sbjct: 353 TIMIDGLCKTKMVDEAISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDK--- 409

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M + S    V TY+ LI+ LCK   +D+AI  F +M+++  QPD+ TY  ++  LCK G
Sbjct: 410 -MRDRSQLADVITYSSLIDALCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGG 468

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L  A ++   L        + TY  +I G  K G  ++A+ L  +M +NG  P+ IT  
Sbjct: 469 RLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFD 528

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRG 497
            +I      D+ ++A  LL+E+  RG
Sbjct: 529 IIICALFEKDENDKAEKLLREMIARG 554



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 175/351 (49%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    N I+ + C    + +A  L   M  +   P+      LI G   +  + +A 
Sbjct: 205 IKPDVVMYNIIIDSLCKNKLVGEACNLYSEMNAKQIYPNVVTYTTLIYGFCIMGCLIEAV 264

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  M +    PD  T+++++  L K G++++A  +L  M  +  +PDV+TYN+++   
Sbjct: 265 ALLNEMKLKNINPDVYTFSILIDALGKEGKMKAAKIVLAVMMKAYVKPDVVTYNSLVDGY 324

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F   + K A   +    + G  P + +YTI+I+ +CK   +  AI + ++M  +   P+ 
Sbjct: 325 FLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEAISLFEEMKHKNVIPNT 384

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +T+NSL++  CK G+      +++ +  R    + ITY++L+ +L      D    +   
Sbjct: 385 ITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDALCKNCHLDQAIALFKK 444

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P ++TY ILI+GLCK G +  A   F  ++ K    DI TY  ++   CK G+
Sbjct: 445 MITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLDIRTYTVMISGFCKAGL 504

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
            +EAL LL  +  + C P  IT++ +I  L +K   +KA  L  +M+  G+
Sbjct: 505 FDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLLREMIARGL 555



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 69/239 (28%), Positives = 127/239 (53%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           +V+ D  T N ++  +    ++  A  + + MA+    P       +I GL +   +++A
Sbjct: 309 YVKPDVVTYNSLVDGYFLVNEVKHAKYVFNSMAQSGVTPGVQSYTIMIDGLCKTKMVDEA 368

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             + + M     +P+TIT+N ++ GLCK G+I     L+D+M       DVITY++++  
Sbjct: 369 ISLFEEMKHKNVIPNTITFNSLIDGLCKSGRIAYVWDLVDKMRDRSQLADVITYSSLIDA 428

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  N    QAI  +K  + +   P + TYTILI+ +CK   +  A EV   + I+G   D
Sbjct: 429 LCKNCHLDQAIALFKKMITQEIQPDMYTYTILIDGLCKGGRLKIAQEVFQHLLIKGYHLD 488

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           I TY  +++  CK G +D+A+ +++ +   G  PN+IT++ ++ +L  +   D  +K+L
Sbjct: 489 IRTYTVMISGFCKAGLFDEALALLSKMEDNGCIPNAITFDIIICALFEKDENDKAEKLL 547



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 92/194 (47%)

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+  FN+M+     P    +N +L +L K      A+ L   L+    +  L+T N LI+
Sbjct: 53  AVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNILIN 112

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
                G +  +  +   +++ G  PD IT  TLI G C   +V++A+    ++     ++
Sbjct: 113 CFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEFQL 172

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              +Y  +I+GLCK  +   AIQ++  +     KPD  +++ I+  +  + +  EA  L+
Sbjct: 173 DRISYGTLINGLCKIGETKAAIQLMRNLEERSIKPDVVMYNIIIDSLCKNKLVGEACNLY 232

Query: 561 QKLIEWKVFEKGTT 574
            ++   +++    T
Sbjct: 233 SEMNAKQIYPNVVT 246



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 37/155 (23%), Positives = 69/155 (44%)

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           N+A+ L + +      P    +N ++  L K      A+ L   +   GI+ D +T   L
Sbjct: 51  NDAVALFNRMLLMRPPPPTFQFNNILSSLVKMQRFPTAISLSKHLDFKGITSDLVTLNIL 110

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I  FC   Q+  +  +L  I KRG          +I GLC   +V  A++  + +++  +
Sbjct: 111 INCFCHLGQITLSFSVLATILKRGYHPDVITLTTLIKGLCLRGEVKKALKFHDDVVALEF 170

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + D   + T++  +   G T+ A +L + L E  +
Sbjct: 171 QLDRISYGTLINGLCKIGETKAAIQLMRNLEERSI 205


>gi|359474464|ref|XP_003631475.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Vitis vinifera]
 gi|297742067|emb|CBI33854.3| unnamed protein product [Vitis vinifera]
          Length = 767

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 124/496 (25%), Positives = 238/496 (47%), Gaps = 42/496 (8%)

Query: 123 ILQNFCSRGKLTDA-------SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           I+ NF  +G   +A       +++++ M R  + P        I GL R+  +E A   +
Sbjct: 254 IMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFV 313

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + ++ + G+ +   YN ++ GLCK+G++  A+ +L+EM   G  PDV TY+ ++      
Sbjct: 314 RSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQ 373

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++ +   ++       P L++Y+ L   +CK+     ++++  D+   G   D   Y
Sbjct: 374 GDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAY 433

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+   C QG  D A  ++  ++   + P+   + +L+H     G W    +  ++M E
Sbjct: 434 SILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLE 493

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P++ T N++I+  C+ G V+ A+N  N+M ++   P++ TYN V+  LCKE     
Sbjct: 494 GGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSER 553

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM---------------- 459
           AL+L  L+   +  P ++ Y+TLIDG AK+   +KA++LY +M+                
Sbjct: 554 ALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILIN 613

Query: 460 -------------------ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
                              ENG++PD I++ ++I GFCR   + +A  L  E+ +RG+  
Sbjct: 614 ILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLP 673

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  ++ G CK  ++D+A  +++ M      PD   ++ ++      G  ++A ++ 
Sbjct: 674 TVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEML 733

Query: 561 QKLIEWKVFEKGTTLL 576
            ++ E  V     T +
Sbjct: 734 NEMKENGVLPDHMTYM 749



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 111/417 (26%), Positives = 196/417 (47%), Gaps = 6/417 (1%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG------QIRSAIA 208
           C  L++ L   +R E    + + M  +G  P+  TY +M+   CK          R A  
Sbjct: 217 CNFLLKCLAEANRREFLRSLFEEMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATE 276

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           +L+EM  +G  P V+TY+T +  +   G  + A+ F +  +       +  Y  +I  +C
Sbjct: 277 ILEEMERNGESPTVVTYSTYIYGLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLC 336

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K+  +  A++VL++M   G SPD+ TY+ L++  CKQG  +  + +I  +    MEP+ +
Sbjct: 337 KKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLV 396

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           +Y++L H L  +   D    I   +  A +      Y+ILI G C  G +D A     +M
Sbjct: 397 SYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEM 456

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           V  N  PD   + +++   CK G+   AL+  +++      P + T N +ID   ++G +
Sbjct: 457 VRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRV 516

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E+A+ L  +M   GI P+  T+  +I   C+  + E A++L   + KR        Y  +
Sbjct: 517 EEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTL 576

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           I G  K      A+ +   M+     PD   ++ ++  +       EAY L++K+ E
Sbjct: 577 IDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTE 633



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/420 (23%), Positives = 206/420 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+   C +G+L +A K+++ M      PD +    LI G  +   +EK   +++ M  
Sbjct: 329 NAIIHGLCKKGELDEALKVLEEMKSCGISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKY 388

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           S   P  ++Y+ +  GLCK+     ++ +  ++  +G + D   Y+ +++     G    
Sbjct: 389 SNMEPSLVSYSSLFHGLCKKRLSDISLDIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDS 448

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    ++ +R    P    +  L+   CK      A+E  + M   G  P I T N +++
Sbjct: 449 AHKLMEEMVRNNLAPDPSNFESLVHGFCKMGLWVNALEFFNMMLEGGILPSIATCNVIID 508

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C++G+ ++A+ ++N + ++G+ PN  TYN +++ L      +   ++  +M + +  P
Sbjct: 509 AHCREGRVEEALNLMNEMQTQGIFPNLFTYNAVINRLCKERKSERALELFPLMLKRNVLP 568

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +V  Y+ LI+G  K     +A+  + +M+     PD+V Y  ++  LC    + EA  L 
Sbjct: 569 SVVVYSTLIDGFAKQSNSQKALMLYARMLKIGVTPDMVAYTILINILCHRSRMCEAYNLF 628

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  +  +P  I+Y ++I G  + G M KA  L+ +M++ G  P  +T+ +L+ G+C+ 
Sbjct: 629 KKMTENGMTPDKISYTSVIAGFCRIGDMRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKM 688

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           ++++ A  L+ E+ ++G       Y ++I    +   +D A+++L  M  +   PD   +
Sbjct: 689 NRIDIADMLIDEMKRKGITPDVVTYNVLIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY 748



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/406 (24%), Positives = 201/406 (49%), Gaps = 1/406 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T + ++  FC +G +     LI+ M   N  P      +L  GL +    + + 
Sbjct: 356 ISPDVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISL 415

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + +  +G   D   Y++++ G C +G + SA  L++EM  +   PD   + +++   
Sbjct: 416 DIFRDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGF 475

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G +  A+ F+   L  G  P + T  ++I+  C++  +  A+ ++++M  +G  P++
Sbjct: 476 CKMGLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNL 535

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN+++N  CK+ K + A+ +   +L R + P+ + Y+TL+     +        +   
Sbjct: 536 FTYNAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYAR 595

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +   +P +  Y ILIN LC    +  A N F +M      PD ++Y +V+   C+ G 
Sbjct: 596 MLKIGVTPDMVAYTILINILCHRSRMCEAYNLFKKMTENGMTPDKISYTSVIAGFCRIGD 655

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +A  L + +      P ++TY +L+DG  K   ++ A +L  +M   GI+PD +T+  
Sbjct: 656 MRKAWALFNEMLQRGHLPTVVTYTSLVDGYCKMNRIDIADMLIDEMKRKGITPDVVTYNV 715

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           LI    R   +++A+++L E+ + G    +  Y +++  L K+KK+
Sbjct: 716 LIAAHRRRGNLDKALEMLNEMKENGVLPDHMTY-MMLEWLLKAKKL 760



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 104/423 (24%), Positives = 200/423 (47%), Gaps = 41/423 (9%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            I +++++        + +A+ +  +   +G E    + N +L+ + +  + +     ++
Sbjct: 179 VIVFDLLIKVFAANSMLENAVDVFLQAKKTGLELSTRSCNFLLKCLAEANRREFLRSLFE 238

Query: 247 DQLRKGCPPYLITYTILIEQVCK------QCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           +    G PP + TYTI++   CK           +A E+L++M   G SP +VTY++ + 
Sbjct: 239 EMKSTGPPPNVFTYTIMMNFYCKGNFGEADIDTRQATEILEEMERNGESPTVVTYSTYIY 298

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ G  + A+  + +L+S     N   YN ++H L  +G  D   K+L+ M     SP
Sbjct: 299 GLCRVGYVESALDFVRSLISANGLVNVYCYNAIIHGLCKKGELDEALKVLEEMKSCGISP 358

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V+TY+ILI+G CK G V++ +    +M   N +P +V+Y+++   LCK+ + + +L + 
Sbjct: 359 DVYTYSILIHGFCKQGDVEKGLYLIEEMKYSNMEPSLVSYSSLFHGLCKKRLSDISLDIF 418

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF--- 477
             L  +        Y+ LI G   +G ++ A  L  +M+ N ++PD     +L+ GF   
Sbjct: 419 RDLGAAGYKYDQTAYSILIKGFCMQGDLDSAHKLMEEMVRNNLAPDPSNFESLVHGFCKM 478

Query: 478 --------------------------------CRADQVEEAVDLLKEIGKRGNKMRNSAY 505
                                           CR  +VEEA++L+ E+  +G       Y
Sbjct: 479 GLWVNALEFFNMMLEGGILPSIATCNVIIDAHCREGRVEEALNLMNEMQTQGIFPNLFTY 538

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             VI+ LCK +K + A+++  LM+     P   V+ST++   A    +++A  L+ ++++
Sbjct: 539 NAVINRLCKERKSERALELFPLMLKRNVLPSVVVYSTLIDGFAKQSNSQKALMLYARMLK 598

Query: 566 WKV 568
             V
Sbjct: 599 IGV 601


>gi|242071495|ref|XP_002451024.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
 gi|241936867|gb|EES10012.1| hypothetical protein SORBIDRAFT_05g022840 [Sorghum bicolor]
          Length = 813

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 236/456 (51%), Gaps = 2/456 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  F   G +  A  L + M +R   PD      ++  L +   ++KA  +L+ MV 
Sbjct: 220 NTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVD 279

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +PD  TYN ++ G    GQ + A+ +  +M+  G  PDV+T N+++ ++  +GK K 
Sbjct: 280 KGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKD 339

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   +     KG    + +Y I++     +  +    E+ + M  +G +PD   +N L+ 
Sbjct: 340 ARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIK 399

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW-DAVDKILDIMNEASHS 359
              K G  D A ++ N +  +G+EP+ +TY+T++ +L   G   DAV+K   ++++   +
Sbjct: 400 AYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGV-A 458

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P++ TY+ LI G C +G + +A +   QM++K  +PDI  +N ++  LCK G + +A  +
Sbjct: 459 PSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNI 518

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
                     P ++ YNTL+DG    G ME A+ ++  M+  GI P+ + + TL+ G+C+
Sbjct: 519 FDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCK 578

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             +++E + L +EI  +G K   + Y +++HGL ++ +   A      M  S    D   
Sbjct: 579 VGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYT 638

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +S ++  +  +  ++EA  L+++L    V    TTL
Sbjct: 639 YSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTL 674



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/460 (28%), Positives = 223/460 (48%), Gaps = 45/460 (9%)

Query: 157 NLIRGLIRIDRIEKASKVL-QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           NL+RGL    R  +A  +L   M   G VPD  +Y +++  LC   +   A  LL  M+ 
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE 207

Query: 216 SG--CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
            G  C P+ + YNT++   F  G   +A   + + +++G  P L TY  ++  +CK   +
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAM 267

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            +A  +L  M  +G  PD  TYNSL+      G++ +AV V   + S+G+ P+ +T N+L
Sbjct: 268 DKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSL 327

Query: 334 LHSL-----------------------------------GSRGCWDAVDKILDIMNEASH 358
           + SL                                    ++GC   + ++ ++M     
Sbjct: 328 MASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLSDGI 387

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P    +N+LI    K G++DRA   FN+M  +  +PD+VTY+TV+ ALC+ G +++A++
Sbjct: 388 APDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDDAVE 447

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
             + +     +P + TY+ LI G    G + KA  L  QMM  G+ PD      +I   C
Sbjct: 448 KFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIINNLC 507

Query: 479 RADQVEEA---VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           +  +V +A    D    IG   N M    Y  ++ G C   K++ A++V ++M+S+  +P
Sbjct: 508 KLGRVMDAQNIFDFTISIGLHPNVM---VYNTLMDGYCLVGKMENALRVFDVMVSAGIQP 564

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +  V+ T+V      G  +E   L+++++  K  +  TTL
Sbjct: 565 NVVVYGTLVNGYCKVGRIDEGLSLFREILH-KGIKPSTTL 603



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/464 (26%), Positives = 222/464 (47%), Gaps = 3/464 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + C  GK+ DA  + D MA + Q  D      ++ G      +   +++ 
Sbjct: 320 DVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELF 379

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M+  G  PD+  +N+++    K G +  A  + +EM   G EPDV+TY+T++  +   
Sbjct: 380 NLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRI 439

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+  +   + +G  P + TY  LI+  C    + +A +++  M  +G  PDI  +
Sbjct: 440 GKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCF 499

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N ++N  CK G+  DA  + +  +S G+ PN + YNTL+      G  +   ++ D+M  
Sbjct: 500 NFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVGKMENALRVFDVMVS 559

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A   P V  Y  L+NG CK G +D  ++ F +++ K  +P    YN +L  L + G    
Sbjct: 560 AGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYNIILHGLFQAGRTVP 619

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A    H +  S  +    TY+ ++ GL K  C ++A++L+ ++    +  D  T   +I 
Sbjct: 620 AKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAMNVKIDITTLNIMIA 679

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR-YK 534
           G  +  +VEEA DL   I + G       Y +++  L K   V+ A  +   M ++   +
Sbjct: 680 GMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIKEGLVEEADDMFSSMENAGCEQ 739

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE--WKVFEKGTTLL 576
           P+  + + +V+++ +      A     K+ E  + +    TTLL
Sbjct: 740 PNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHSTTTLL 783



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 220/452 (48%), Gaps = 2/452 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N ++   C    +  A  ++  M  +  +PD     +LI G     + ++A 
Sbjct: 247 ISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAV 306

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V + M   G +PD +T N ++  LCK G+I+ A  + D M++ G + D+ +Y  +L   
Sbjct: 307 RVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGY 366

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G        +   L  G  P    + +LI+   K   + RA  + ++M  +G  PD+
Sbjct: 367 ATKGCLVDLTELFNLMLSDGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDV 426

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILD 351
           VTY++++   C+ GK DDAV   N ++ +G+ P+  TY+ L+    + G    A D +L 
Sbjct: 427 VTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQ 486

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           +MN+    P +  +N +IN LCK G V  A N F+  +S    P+++ YNT++   C  G
Sbjct: 487 MMNKGMR-PDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLMDGYCLVG 545

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +  AL++  ++  +   P ++ Y TL++G  K G +++ + L+ +++  GI P    + 
Sbjct: 546 KMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIKPSTTLYN 605

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            ++ G  +A +   A     E+ + G  M    Y +V+ GL K+   D AI + + + + 
Sbjct: 606 IILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILLFKELHAM 665

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             K D T  + ++  +      EEA  L+  +
Sbjct: 666 NVKIDITTLNIMIAGMFQIRRVEEAKDLFASI 697



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 86/318 (27%), Positives = 161/318 (50%), Gaps = 5/318 (1%)

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-L 313
           P L TY IL++   +       +     +   G   D +  ++L+   C+  +  +A+ +
Sbjct: 106 PTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALDI 165

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS--PTVFTYNILING 371
           +++ +   G  P+  +Y  +L SL S       D++L +M E      P    YN +I+G
Sbjct: 166 LLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVIDG 225

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
             K G V++A + FN+MV +   PD+ TYN V+ ALCK   +++A  +L  +      P 
Sbjct: 226 FFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLPD 285

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
             TYN+LI G +  G  ++A+ +  +M   GI PD +T  +L+   C+  ++++A D+  
Sbjct: 286 NWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTLNSLMASLCKHGKIKDARDVFD 345

Query: 492 EIGKRGNKMRNSAYRLVIHGLC-KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            +  +G K    +Y+++++G   K   VD+  ++  LM+S    PD  +F+ ++K  A  
Sbjct: 346 SMAMKGQKTDIFSYKIMLNGYATKGCLVDLT-ELFNLMLSDGIAPDSHIFNVLIKAYAKC 404

Query: 551 GMTEEAYKLWQKLIEWKV 568
           GM + A  ++ ++ E  V
Sbjct: 405 GMLDRATIIFNEMREQGV 422



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 101/435 (23%), Positives = 182/435 (41%), Gaps = 83/435 (19%)

Query: 206 AIALLDEMSVSG----CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           A+AL + +S +       P + TY  ++       + K  + F+   L+ G     I  +
Sbjct: 88  AVALFNRVSRAHGPRVLSPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMIS 147

Query: 262 ILIEQVCKQCGIARAIEVL-DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            L+  +C+    A A+++L   M   GC PD+ +Y  ++   C   K   A  ++  +  
Sbjct: 148 NLLRGLCEAKRTAEALDILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAE 207

Query: 321 RGME--PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH---SPTVFTYNILINGLCKY 375
            G    PN++ YNT++      G    V+K  D+ NE      SP + TYN ++N LCK 
Sbjct: 208 GGAVCLPNAVAYNTVIDGFFKEG---DVNKACDLFNEMVQRGISPDLSTYNCVVNALCKA 264

Query: 376 GLVDRAINSFNQMV-----------------------------------SKNCQPDIVTY 400
             +D+A     QMV                                   S+   PD+VT 
Sbjct: 265 RAMDKAEAILRQMVDKGVLPDNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTL 324

Query: 401 NTVLGALCKEGMLNEALQLLH----------------LLNGSSCSPCLI----------- 433
           N+++ +LCK G + +A  +                  +LNG +   CL+           
Sbjct: 325 NSLMASLCKHGKIKDARDVFDSMAMKGQKTDIFSYKIMLNGYATKGCLVDLTELFNLMLS 384

Query: 434 --------TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
                    +N LI   AK G +++A +++ +M E G+ PD +T+ T+I   CR  ++++
Sbjct: 385 DGIAPDSHIFNVLIKAYAKCGMLDRATIIFNEMREQGVEPDVVTYSTVIAALCRIGKMDD 444

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           AV+   ++  +G     S Y  +I G C    +  A  ++  M++   +PD   F+ I+ 
Sbjct: 445 AVEKFNQMIDQGVAPSISTYHFLIQGFCTHGDLLKAKDLVLQMMNKGMRPDIGCFNFIIN 504

Query: 546 KVADDGMTEEAYKLW 560
            +   G   +A  ++
Sbjct: 505 NLCKLGRVMDAQNIF 519



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 166/382 (43%), Gaps = 7/382 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCINLIRGLIRIDRIE 169
           VE D  T + ++   C  GK+ DA +  + M  +   P    +HF   LI+G      + 
Sbjct: 422 VEPDVVTYSTVIAALCRIGKMDDAVEKFNQMIDQGVAPSISTYHF---LIQGFCTHGDLL 478

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           KA  ++  M+  G  PD   +N ++  LCK G++  A  + D     G  P+V+ YNT++
Sbjct: 479 KAKDLVLQMMNKGMRPDIGCFNFIINNLCKLGRVMDAQNIFDFTISIGLHPNVMVYNTLM 538

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                 GK + A+  +   +  G  P ++ Y  L+   CK   I   + +  ++  +G  
Sbjct: 539 DGYCLVGKMENALRVFDVMVSAGIQPNVVVYGTLVNGYCKVGRIDEGLSLFREILHKGIK 598

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P    YN +++   + G+   A +  + +   G+  +  TY+ +L  L    C D    +
Sbjct: 599 PSTTLYNIILHGLFQAGRTVPAKVKFHEMTESGIAMDRYTYSIVLGGLFKNSCSDEAILL 658

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              ++  +    + T NI+I G+ +   V+ A + F  +      P +VTY+ ++  L K
Sbjct: 659 FKELHAMNVKIDITTLNIMIAGMFQIRRVEEAKDLFASISRSGLVPSVVTYSIMMTNLIK 718

Query: 410 EGMLNEALQLLHLLNGSSCS-PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           EG++ EA  +   +  + C  P     N ++  L +K  + +A     ++ E   S D  
Sbjct: 719 EGLVEEADDMFSSMENAGCEQPNSQLLNHVVRELLEKREIVRAGTYLSKIDERSFSLDHS 778

Query: 469 THRTLIWGFCRADQVEEAVDLL 490
           T   LI  F       E +  L
Sbjct: 779 TTTLLIDLFSSKGTCREHIRFL 800



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 3/220 (1%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SPT+ TY IL++   +       +  F Q++      D +  + +L  LC+     EAL 
Sbjct: 105 SPTLHTYGILMDCCTRAHRPKLTLAFFGQVLKTGLGIDTIMISNLLRGLCEAKRTAEALD 164

Query: 419 -LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS--PDDITHRTLIW 475
            LLH +    C P + +Y  ++  L       +A  L   M E G    P+ + + T+I 
Sbjct: 165 ILLHRMPHLGCVPDVFSYCIVLKSLCSDRKSGQADELLRMMAEGGAVCLPNAVAYNTVID 224

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GF +   V +A DL  E+ +RG     S Y  V++ LCK++ +D A  +L  M+     P
Sbjct: 225 GFFKEGDVNKACDLFNEMVQRGISPDLSTYNCVVNALCKARAMDKAEAILRQMVDKGVLP 284

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           D+  +++++   +  G  +EA ++ +K+    +     TL
Sbjct: 285 DNWTYNSLIYGYSSTGQWKEAVRVSKKMTSQGILPDVVTL 324


>gi|359485815|ref|XP_003633341.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 822

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 138/478 (28%), Positives = 231/478 (48%), Gaps = 40/478 (8%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C+     +A +L+  M +R   P+      LI GL R+ ++E A  +   M+  G VP+
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T+TYN ++  LC  G+  +A+ +   M   G   +  TYN I++ +   G  ++A+  ++
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             L+ G  P ++TY  LI     +  +  A  +LD M   GC PD  TYN LV+   K G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 307 KYDDAVLVINNLLSRGMEPNSITYN----------------TLLHSLGSRGC------WD 344
           K + A      ++  G+ PN ++Y                 +LL  +   GC      ++
Sbjct: 493 KLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYN 552

Query: 345 AV-------------DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           AV             +KI D M E    P V TY  LI+GLC+ G    A   F+ M  +
Sbjct: 553 AVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
            C P++ TY++++  LC+EG  +EA ++  +     C P L TY+TL+ GL +KG   +A
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGKADEAERMSEI----GCEPTLDTYSTLVSGLCRKGRFYEA 668

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             L   M E G  PD   + +L+   C+  +V+ A+ +   I  +G ++  S YR +I  
Sbjct: 669 EQLVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICA 728

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           LCK+ +V+ A  + + M+   +  D+ V++ +V  +  +G  +   KL   ++E K F
Sbjct: 729 LCKAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLH-IMESKNF 785



 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 216/406 (53%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI  L +  ++ +A  +L  +      PD  TY  ++ G C+   +  A  + D M   G
Sbjct: 204 LINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEG 263

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+P+ +TY+T++  + + G+  +A+   ++ + KG  P + TYT+ I  +C       AI
Sbjct: 264 CDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAI 323

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E++  M   GC P++ TY +L++   + GK + A+ + + +L  G+ PN++TYN L++ L
Sbjct: 324 ELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINEL 383

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G +    KI   M          TYN +I GLC  G +++A+  F +M+     P +
Sbjct: 384 CVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTV 443

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTYNT++     +G +N A +LL L+  + C P   TYN L+ G +K G +E A   + +
Sbjct: 444 VTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQE 503

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+E G++P+ +++  LI G  +  +V+ A+ LLK + + G      +Y  VI+GL K  +
Sbjct: 504 MVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENR 563

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              A ++ + M+     P+   ++T++  +  +G T+ A+K++  +
Sbjct: 564 FSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDM 609



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 131/482 (27%), Positives = 234/482 (48%), Gaps = 39/482 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++     +GK+ +A  ++  + + +  PD     +LI G  R   ++ A  V   M
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM------------------------- 213
           V  G  P+++TY+ ++ GLC  G++  A+ +L+EM                         
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319

Query: 214 ----------SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                        GC P+V TY  ++  +   GK + AIG +   L++G  P  +TY  L
Sbjct: 320 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I ++C     + A+++   M   G   +  TYN ++   C  G  + A+++   +L  G 
Sbjct: 380 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P  +TYNTL++   ++G  +   ++LD+M E    P  +TYN L++G  K+G ++ A  
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +MV     P+ V+Y  ++    K+G ++ AL LL  +    C+P + +YN +I+GL+
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K+    +A  +  +M+E G+ P+ IT+ TLI G CR  + + A  +  ++ KR       
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I+GLC+  K D A ++ E+      +P    +ST+V  +   G   EA +L + +
Sbjct: 620 TYSSLIYGLCQEGKADEAERMSEIGC----EPTLDTYSTLVSGLCRKGRFYEAEQLVKDM 675

Query: 564 IE 565
            E
Sbjct: 676 KE 677



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 224/445 (50%), Gaps = 4/445 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G+ + A K+   M     + +      +I+GL     IEKA  + + M
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G +P  +TYN ++ G   +G + +A  LLD M  +GCEPD  TYN ++      GK 
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A  ++++ +  G  P  ++YT LI+   K   +  A+ +L  M   GC+P++ +YN++
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   K+ ++ +A  + + ++ +G+ PN ITY TL+  L   G      KI   M +   
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 614

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P ++TY+ LI GLC+ G  D A     +M    C+P + TY+T++  LC++G   EA Q
Sbjct: 615 LPNLYTYSSLIYGLCQEGKADEA----ERMSEIGCEPTLDTYSTLVSGLCRKGRFYEAEQ 670

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +      P    Y +L+    K   ++ A+ ++  +   G       +R LI   C
Sbjct: 671 LVKDMKERGFCPDREIYYSLLIAHCKNLEVDHALKIFHSIEAKGFQLHLSIYRALICALC 730

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A QVEEA  L   + ++        + +++ GL K  ++D+ +++L +M S  + P+  
Sbjct: 731 KAGQVEEAQALFDNMLEKEWNADEIVWTVLVDGLLKEGELDLCMKLLHIMESKNFTPNIQ 790

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            +  + ++++  G + E+  L  KL
Sbjct: 791 TYVILGRELSRIGKSIESEPLADKL 815



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 201/411 (48%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  L+  L + + +E A  + + M+ SG  P  +T+N ++  L K+G++R A  +L ++ 
Sbjct: 166 CNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIF 225

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
                PDV TY +++     N     A G +   +++GC P  +TY+ LI  +C +  + 
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 285

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+++L++M  +G  P + TY   +   C     ++A+ ++  +  RG  PN  TY  L+
Sbjct: 286 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 345

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
             L   G  +    +   M +    P   TYN LIN LC  G    A+  F+ M      
Sbjct: 346 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSL 405

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            +  TYN ++  LC  G + +A+ L   +      P ++TYNTLI+G   KG +  A  L
Sbjct: 406 ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL 465

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              M ENG  PD+ T+  L+ GF +  ++E A    +E+ + G      +Y  +I G  K
Sbjct: 466 LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSK 525

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             KVD+A+ +L+ M      P+   ++ ++  ++ +    EA K+  K++E
Sbjct: 526 DGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 205/416 (49%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P  H  I +I+     + I + +  L  +   G      + N ++  L K   +  A  L
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
             +M  SG +P ++T+NT++  +   GK ++A        +    P + TYT LI   C+
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 245

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A  V D M  EGC P+ VTY++L+N  C +G+ D+A+ ++  ++ +G+EP   T
Sbjct: 246 NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYT 305

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y   + +L +    +   +++  M +    P V TY  LI+GL + G ++ AI  +++M+
Sbjct: 306 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +   P+ VTYN ++  LC  G  + AL++ H + G        TYN +I GL   G +E
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 425

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KAMVL+ +M++ G  P  +T+ TLI G+     V  A  LL  + + G +     Y  ++
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 485

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            G  K  K++ A    + M+     P+   ++ ++   + DG  + A  L +++ E
Sbjct: 486 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541


>gi|357507167|ref|XP_003623872.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355498887|gb|AES80090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 539

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 129/438 (29%), Positives = 222/438 (50%), Gaps = 1/438 (0%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           P ++    T + ++  F   G++  A  L+  + +     D      L++GL    R+ +
Sbjct: 99  PTIKPSLITFSILINAFAQLGQMGFAFSLLGNILKMGFQIDVRILTTLMKGLCLKGRVLE 158

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  +L   V  G   D + Y  ++ GLCK G+ R AI +  +M      P++I YNT++ 
Sbjct: 159 AVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVID 218

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CS 289
            +   G   +A G   + +  G    + +Y  +I   C       A+++LD+M + G   
Sbjct: 219 GLCKQGLVDEACGLCTEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVY 278

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD+ T+N L++  CK G+  +A  V+  ++ RG +P+ ++YN L++     G      ++
Sbjct: 279 PDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQV 338

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            D M E +  P V +Y  LING CK  +VD A+    +M +KN  PD VTYN +L  L K
Sbjct: 339 FDKMVERTALPNVISYCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSK 398

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G       L+  +  S     LITYN L+D   K    +KA+ L+  ++E GISP+  T
Sbjct: 399 SGRSLYEWDLVEAMRASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRT 458

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  L+ G C++ +++ A ++ + +  +G +     Y ++IHGLCK   +D A  +L  M+
Sbjct: 459 YNILLDGLCKSGRLKYAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMV 518

Query: 530 SSRYKPDDTVFSTIVKKV 547
           ++ Y P+   F TIV+ +
Sbjct: 519 NNNYLPNYITFDTIVRAI 536



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 108/366 (29%), Positives = 179/366 (48%), Gaps = 36/366 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE     I+   C  GK  DA ++   M +    P+      +I GL +   +++A  + 
Sbjct: 174 DEVCYGTIINGLCKIGKTRDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLC 233

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFD 234
             MV +G   D  +YN M+ G C  G+ ++A+ LLDEM V G   PDV T+N ++  +  
Sbjct: 234 TEMVENGIELDVYSYNSMIHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCK 293

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+  +A       +++G  P +++Y  L+   C    +  A +V D M      P++++
Sbjct: 294 LGRVSEAYNVVAVMIKRGWKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVIS 353

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC----WDAV---- 346
           Y +L+N  CK    D+A++++  + ++ + P+++TYN LL  L   G     WD V    
Sbjct: 354 YCTLINGYCKVRMVDEAMVLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMR 413

Query: 347 ------------------------DKILDIMN---EASHSPTVFTYNILINGLCKYGLVD 379
                                   DK L +     E   SP + TYNIL++GLCK G + 
Sbjct: 414 ASGQPADLITYNVLLDDYFKHEKFDKALALFQHIIEIGISPNIRTYNILLDGLCKSGRLK 473

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A   F  + +K CQP+I TYN ++  LCKEG L+EA  LL+ +  ++  P  IT++T++
Sbjct: 474 YAKEIFQLLSAKGCQPNIRTYNIMIHGLCKEGFLDEAEALLYKMVNNNYLPNYITFDTIV 533

Query: 440 DGLAKK 445
             +  K
Sbjct: 534 RAILVK 539



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 184/378 (48%), Gaps = 2/378 (0%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           +N ++  L K  +  + ++L   + S    +P +IT++ ++      G+   A     + 
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           L+ G    +   T L++ +C +  +  A+ +L +    G   D V Y +++N  CK GK 
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            DA+ +   +    + PN I YNT++  L  +G  D    +   M E      V++YN +
Sbjct: 192 RDAIQMFPKMKKIRVYPNLIMYNTVIDGLCKQGLVDEACGLCTEMVENGIELDVYSYNSM 251

Query: 369 INGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           I+G C  G    A+   ++MV +    PD+ T+N ++  LCK G ++EA  ++ ++    
Sbjct: 252 IHGFCSVGRFQAAVKLLDEMVVRGKVYPDVYTFNILIDGLCKLGRVSEAYNVVAVMIKRG 311

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P +++YN L++G    G + +A  ++ +M+E    P+ I++ TLI G+C+   V+EA+
Sbjct: 312 WKPDIVSYNALMNGYCLSGSVGEAKQVFDKMVERTALPNVISYCTLINGYCKVRMVDEAM 371

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            LL E+  +        Y  ++ GL KS +      ++E M +S    D   ++ ++   
Sbjct: 372 VLLTEMHNKNLVPDTVTYNCLLDGLSKSGRSLYEWDLVEAMRASGQPADLITYNVLLDDY 431

Query: 548 ADDGMTEEAYKLWQKLIE 565
                 ++A  L+Q +IE
Sbjct: 432 FKHEKFDKALALFQHIIE 449



 Score = 47.4 bits (111), Expect = 0.022,   Method: Compositional matrix adjust.
 Identities = 34/136 (25%), Positives = 62/136 (45%), Gaps = 1/136 (0%)

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           +N L+  L K       + LY  +     I P  IT   LI  F +  Q+  A  LL  I
Sbjct: 72  FNKLLSTLIKLKRYNAVVSLYTILQSKPTIKPSLITFSILINAFAQLGQMGFAFSLLGNI 131

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            K G ++       ++ GLC   +V  A+ +L   +   ++ D+  + TI+  +   G T
Sbjct: 132 LKMGFQIDVRILTTLMKGLCLKGRVLEAVSLLHEYVDRGFRFDEVCYGTIINGLCKIGKT 191

Query: 554 EEAYKLWQKLIEWKVF 569
            +A +++ K+ + +V+
Sbjct: 192 RDAIQMFPKMKKIRVY 207


>gi|147834641|emb|CAN60904.1| hypothetical protein VITISV_016343 [Vitis vinifera]
          Length = 580

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 118/382 (30%), Positives = 200/382 (52%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           GKL  A + I  M      P+      +I G      IE A ++L  M + G  PD+ TY
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
             ++ G+CK G++  A  L D+M   G  P+ +TYNT++    + G  ++A  +  + ++
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           KG  P + TY +L+  +  +  +  A +++ +M  +G  PD +TYN L+N   + G    
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  + N +LS+G+EP  +TY +L++ L  R      D + + + +   SP V  +N +I+
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G C  G V+RA     +M  K+  PD VT+NT++   C+EG + EA  LL  +      P
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             I+YNTLI G  ++G ++ A  +  +M+  G +P  +T+  LI   C+  + + A +LL
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546

Query: 491 KEIGKRGNKMRNSAYRLVIHGL 512
           KE+  +G    +S Y  +I G+
Sbjct: 547 KEMVNKGISPDDSTYLSLIEGM 568



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 116/393 (29%), Positives = 209/393 (53%), Gaps = 7/393 (1%)

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           +++KA + +  M   G  P+ ++YN ++ G   RG I  A  +LD M V G EPD  TY 
Sbjct: 188 KLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYG 247

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           +++  M   G+ ++A G +   +  G  P  +TY  LI+  C +  + RA    D+M  +
Sbjct: 248 SLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKK 307

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G  P + TYN LV+    +G+  +A  +I  +  +G+ P++ITYN L++  G   C +A 
Sbjct: 308 GIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILIN--GYSRCGNA- 364

Query: 347 DKILDIMNE---ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
            +  D+ NE       PT  TY  LI  L +   +  A + F +++ +   PD++ +N +
Sbjct: 365 KRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAM 424

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +   C  G +  A  LL  ++  S  P  +T+NTL+ G  ++G +E+A +L  +M   GI
Sbjct: 425 IDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGI 484

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD I++ TLI G+ R   +++A  +  E+   G       Y  +I  LCK+++ D+A +
Sbjct: 485 KPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEE 544

Query: 524 VLELMISSRYKPDDTVFSTIVKKVAD-DGMTEE 555
           +L+ M++    PDD+ + ++++ + + D + E+
Sbjct: 545 LLKEMVNKGISPDDSTYLSLIEGMGNVDTLVED 577



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 115/366 (31%), Positives = 191/366 (52%), Gaps = 2/366 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+  + SRG +  A +++D M  +   PD +   +LI G+ +  R+E+AS +   MV 
Sbjct: 212 NTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEASGLFDKMVE 271

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G VP+ +TYN ++ G C +G +  A +  DEM   G  P V TYN ++  +F  G+  +
Sbjct: 272 IGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHALFMEGRMGE 331

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA-RAIEVLDDMAIEGCSPDIVTYNSLV 299
           A    K+  +KG  P  ITY ILI    + CG A RA ++ ++M  +G  P  VTY SL+
Sbjct: 332 ADDMIKEMRKKGIIPDAITYNILINGYSR-CGNAKRAFDLHNEMLSKGIEPTHVTYTSLI 390

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
               ++ +  +A  +   +L +G+ P+ I +N ++    + G  +    +L  M+  S  
Sbjct: 391 YVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVP 450

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   T+N L+ G C+ G V+ A    ++M  +  +PD ++YNT++    + G + +A  +
Sbjct: 451 PDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXV 510

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +     +P L+TYN LI  L K    + A  L  +M+  GISPDD T+ +LI G   
Sbjct: 511 RDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 570

Query: 480 ADQVEE 485
            D + E
Sbjct: 571 VDTLVE 576



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 190/377 (50%)

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G+++ A   +  M   G +P+V++YNTI+      G  + A         KG  P   TY
Sbjct: 187 GKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTY 246

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
             LI  +CK+  +  A  + D M   G  P+ VTYN+L++  C +G  + A    + ++ 
Sbjct: 247 GSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVK 306

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +G+ P+  TYN L+H+L   G     D ++  M +    P   TYNILING  + G   R
Sbjct: 307 KGIMPSVSTYNLLVHALFMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKR 366

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A +  N+M+SK  +P  VTY +++  L +   + EA  L   +     SP +I +N +ID
Sbjct: 367 AFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMID 426

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G    G +E+A +L  +M    + PD++T  TL+ G CR  +VEEA  LL E+  RG K 
Sbjct: 427 GHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKP 486

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            + +Y  +I G  +   +  A  V + M+S  + P    ++ ++K +  +   + A +L 
Sbjct: 487 DHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELL 546

Query: 561 QKLIEWKVFEKGTTLLA 577
           ++++   +    +T L+
Sbjct: 547 KEMVNKGISPDDSTYLS 563



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 97/336 (28%), Positives = 162/336 (48%), Gaps = 39/336 (11%)

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L++QV  +  IA   E+ D++ +   S D ++  S + F   +GK   A   I  +   G
Sbjct: 148 LLKQVM-ETRIATNRELFDELTL---SRDRLSVKSSIVFDLLEGKLKKAREFIGFMEGLG 203

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIM-------------------------NEAS 357
            +PN ++YNT++H   SRG  +   +ILD M                          EAS
Sbjct: 204 FKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYTYGSLISGMCKEGRLEEAS 263

Query: 358 H----------SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
                       P   TYN LI+G C  G ++RA +  ++MV K   P + TYN ++ AL
Sbjct: 264 GLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMVKKGIMPSVSTYNLLVHAL 323

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
             EG + EA  ++  +      P  ITYN LI+G ++ G  ++A  L+ +M+  GI P  
Sbjct: 324 FMEGRMGEADDMIKEMRKKGIIPDAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTH 383

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+ +LI+   R ++++EA DL ++I  +G       +  +I G C +  V+ A  +L+ 
Sbjct: 384 VTYTSLIYVLSRRNRMKEADDLFEKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKE 443

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M      PD+  F+T+++    +G  EEA  L  ++
Sbjct: 444 MDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEM 479



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 63/224 (28%), Positives = 111/224 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +   G    A  L + M  +   P      +LI  L R +R+++A  + 
Sbjct: 347 DAITYNILINGYSRCGNAKRAFDLHNEMLSKGIEPTHVTYTSLIYVLSRRNRMKEADDLF 406

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + ++  G  PD I +N M+ G C  G +  A  LL EM      PD +T+NT+++     
Sbjct: 407 EKILDQGVSPDVIMFNAMIDGHCANGNVERAFMLLKEMDRKSVPPDEVTFNTLMQGRCRE 466

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK ++A     +   +G  P  I+Y  LI    ++  I  A  V D+M   G +P ++TY
Sbjct: 467 GKVEEARMLLDEMKXRGIKPDHISYNTLISGYGRRGDIKDAFXVRDEMLSIGFNPTLLTY 526

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           N+L+   CK  + D A  ++  ++++G+ P+  TY +L+  +G+
Sbjct: 527 NALIKCLCKNQEGDLAEELLKEMVNKGISPDDSTYLSLIEGMGN 570



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 47/129 (36%), Positives = 61/129 (47%), Gaps = 2/129 (1%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLI 163
           L   D   V  DE T N ++Q  C  GK+ +A  L+D M  R   PD H   N LI G  
Sbjct: 441 LKEMDRKSVPPDEVTFNTLMQGRCREGKVEEARMLLDEMKXRGIKPD-HISYNTLISGYG 499

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           R   I+ A  V   M+  G  P  +TYN ++  LCK  +   A  LL EM   G  PD  
Sbjct: 500 RRGDIKDAFXVRDEMLSIGFNPTLLTYNALIKCLCKNQEGDLAEELLKEMVNKGISPDDS 559

Query: 224 TYNTILRTM 232
           TY +++  M
Sbjct: 560 TYLSLIEGM 568



 Score = 48.9 bits (115), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/130 (20%), Positives = 63/130 (48%)

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           +G ++KA    G M   G  P+ +++ T+I G+     +E A  +L  +  +G +  +  
Sbjct: 186 EGKLKKAREFIGFMEGLGFKPNVVSYNTIIHGYSSRGNIEGARRILDAMRVKGIEPDSYT 245

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I G+CK  +++ A  + + M+     P+   ++T++    + G  E A+    +++
Sbjct: 246 YGSLISGMCKEGRLEEASGLFDKMVEIGLVPNAVTYNTLIDGYCNKGDLERAFSYRDEMV 305

Query: 565 EWKVFEKGTT 574
           +  +    +T
Sbjct: 306 KKGIMPSVST 315


>gi|449451896|ref|XP_004143696.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 1032

 Score =  212 bits (539), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 132/482 (27%), Positives = 227/482 (47%), Gaps = 35/482 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  FC + +  +A  + + M      P+      LI G I+   IE+A ++ 
Sbjct: 310 DGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIK 369

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G   + +TYN M+GG+ K G++  A++L +EM ++G EPD  TYN ++     +
Sbjct: 370 DEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKS 429

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD-------------- 281
               +A     +   +   P   TY++LI  +C    + +A EVLD              
Sbjct: 430 HDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMY 489

Query: 282 -------------DMAIE--------GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
                        +MAIE        G  PD+  YN L+   C+  K ++A +++ ++  
Sbjct: 490 GTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE 549

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +G++PN+ TY   ++     G     ++    M  +   P    Y ILI G C  G    
Sbjct: 550 KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVE 609

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+++F  M+ K   PDI  Y+ ++ +L K G   EA+ +      +   P +  YN+LI 
Sbjct: 610 ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLIS 669

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  K+G +EKA  LY +M+ NGI+P+ + + TLI G C+  +V +A +L  EI ++    
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVP 729

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  +I G CKS  +  A ++ + MIS    PD  ++  ++     +G  E+A  L+
Sbjct: 730 DVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLF 789

Query: 561 QK 562
            +
Sbjct: 790 HE 791



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 122/426 (28%), Positives = 212/426 (49%), Gaps = 1/426 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C    L  A++++D M R    P+      LI+  ++  R E A ++L+IM
Sbjct: 453 TYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIM 512

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G +PD   YN ++ GLC+  ++  A  LL +M   G +P+  TY   +     +G+ 
Sbjct: 513 IANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEI 572

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A  ++KD L  G  P  + YTILI+  C       A+     M  +G  PDI  Y+++
Sbjct: 573 QVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAI 632

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K GK  +A+ V    L  G+ P+   YN+L+      G  +   ++ D M     
Sbjct: 633 IHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGI 692

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P +  YN LINGLCK G V +A   F+++  K+  PD+VTY+T++   CK G L EA +
Sbjct: 693 NPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFK 752

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +     SP    Y  LIDG  K+G +EKA+ L+ +  +  +        +LI  FC
Sbjct: 753 LFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFC 811

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +V EA +L  ++  +        Y ++I    K++ ++ A Q+   M +    P+  
Sbjct: 812 KHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTL 871

Query: 539 VFSTIV 544
            +++++
Sbjct: 872 TYTSLL 877



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 219/443 (49%), Gaps = 1/443 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            +  F   G L +AS +          P    C NL+R L++ + +    KV   MV + 
Sbjct: 178 FIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAK 237

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD  TY  ++   CK G +     +L EM    C+P++ TYN  +  +   G   +A+
Sbjct: 238 IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEAL 296

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              K  + KG  P   TYT+L++  CKQ     A  + + M   G +P+  TY +L++  
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+G  ++A+ + + +++RG++ N +TYN ++  +   G       + + M  A   P  
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDT 416

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TYN+LI+G  K   + +A     +M ++   P   TY+ ++  LC    L +A ++L  
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  +   P +  Y TLI    ++   E A+ L   M+ NG+ PD   +  LI G CRA +
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEEA  LL ++G++G K     Y   I+   KS ++ +A +  + M+SS   P++ +++ 
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++K   D G T EA   ++ ++E
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLE 619



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 223/477 (46%), Gaps = 36/477 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++      G++  A  L + M      PD      LI G ++   + KA ++L  M
Sbjct: 383 TYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEM 442

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P   TY++++ GLC    ++ A  +LD+M  +G +P+V  Y T+++      ++
Sbjct: 443 KARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRY 502

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + AI   K  +  G  P L  Y  LI  +C+   +  A  +L DM  +G  P+  TY + 
Sbjct: 503 EMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAF 562

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL----------HSLGSRGCWDAVDK 348
           +N   K G+   A     ++LS G+ PN++ Y  L+           +L +  C      
Sbjct: 563 INLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGL 622

Query: 349 ILDIMNEAS--HS-----------------------PTVFTYNILINGLCKYGLVDRAIN 383
           I DI   ++  HS                       P VF YN LI+G CK G +++A  
Sbjct: 623 IPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQ 682

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            +++M+     P+IV YNT++  LCK G + +A +L   +      P ++TY+T+IDG  
Sbjct: 683 LYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYC 742

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G + +A  L+ +M+  GISPD   +  LI G  +   +E+A+ L  E  ++ +    S
Sbjct: 743 KSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHE-AQQKSVGSLS 801

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           A+  +I   CK  KV  A ++ + M+  +  P+   ++ ++       M EEA +L+
Sbjct: 802 AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 858



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/481 (26%), Positives = 215/481 (44%), Gaps = 35/481 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  +   C  G + +A ++  +M  +   PD H    L+ G  +  R ++A  + + M
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG  P+  TY  ++ G  K G I  A+ + DEM   G + +V+TYN ++  +   G+ 
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM 397

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + + L  G  P   TY +LI+   K   +A+A E+L +M     +P   TY+ L
Sbjct: 398 AKAMSLFNEMLMAGLEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C       A  V++ ++  G++PN   Y TL+ +      ++   ++L IM     
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGV 517

Query: 359 SPTVFTYNILINGLC-----------------------------------KYGLVDRAIN 383
            P +F YN LI GLC                                   K G +  A  
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F  M+S    P+ V Y  ++   C  G   EAL     +      P +  Y+ +I  L+
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G  ++AM ++ + ++ G+ PD   + +LI GFC+   +E+A  L  E+   G      
Sbjct: 638 KNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I+GLCK  +V  A ++ + +      PD   +STI+      G   EA+KL+ ++
Sbjct: 698 VYNTLINGLCKLGEVTKARELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEM 757

Query: 564 I 564
           I
Sbjct: 758 I 758



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 112/449 (24%), Positives = 212/449 (47%), Gaps = 5/449 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ +  T    +  +   G++  A +    M     +P+      LI+G   +    +A 
Sbjct: 552 IKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEAL 611

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
              + M+  G +PD   Y+ ++  L K G+ + A+ +  +   +G  PDV  YN+++   
Sbjct: 612 STFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGF 671

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G  ++A   + + L  G  P ++ Y  LI  +CK   + +A E+ D++  +   PD+
Sbjct: 672 CKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKARELFDEIEEKDLVPDV 731

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY+++++  CK G   +A  + + ++S+G+ P+   Y  L+   G  G    ++K L +
Sbjct: 732 VTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG---NLEKALSL 788

Query: 353 MNEASHSP--TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
            +EA      ++  +N LI+  CK+G V  A   F+ MV K   P+IVTY  ++ A  K 
Sbjct: 789 FHEAQQKSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKA 848

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
            M+ EA QL   +   +  P  +TY +L+    + G   K + L+  M   GI+ D I +
Sbjct: 849 EMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAY 908

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             +   +C+  +  EA+ LL +    G K+ +  +  +I  LCK K++   +++L  M  
Sbjct: 909 GVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGK 968

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                     +T++      G  +EA K+
Sbjct: 969 EELSLSSKTCNTLLLGFYKSGNEDEASKV 997



 Score =  159 bits (401), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 196/428 (45%), Gaps = 1/428 (0%)

Query: 123  ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            +++  C  G   +A      M  +  IPD      +I  L +  + ++A  V    + +G
Sbjct: 597  LIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTG 656

Query: 183  GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             VPD   YN ++ G CK G I  A  L DEM  +G  P+++ YNT++  +   G+  +A 
Sbjct: 657  VVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINGLCKLGEVTKAR 716

Query: 243  GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              + +   K   P ++TY+ +I+  CK   +  A ++ D+M  +G SPD   Y  L++  
Sbjct: 717  ELFDEIEEKDLVPDVVTYSTIIDGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGC 776

Query: 303  CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
             K+G  + A+ + +    + +   S  +N+L+ S    G      ++ D M +   +P +
Sbjct: 777  GKEGNLEKALSLFHEAQQKSVGSLS-AFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNI 835

Query: 363  FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             TY ILI+   K  +++ A   F  M ++N  P+ +TY ++L +  + G   + + L   
Sbjct: 836  VTYTILIDAYGKAEMMEEAEQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKD 895

Query: 423  LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
            +     +   I Y  +     K+G   +A+ L  + +  GI  +D     LI+  C+  Q
Sbjct: 896  MEARGIACDAIAYGVMASAYCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQ 955

Query: 483  VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
            +   ++LL E+GK    + +     ++ G  KS   D A +VL +M    + P     + 
Sbjct: 956  ISTVLELLSEMGKEELSLSSKTCNTLLLGFYKSGNEDEASKVLGVMQRLGWVPTSLSLTD 1015

Query: 543  IVKKVADD 550
             +    DD
Sbjct: 1016 SISTGRDD 1023



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 168/355 (47%), Gaps = 20/355 (5%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           I L +E +V    P+++  + + ++  D+    Q   +W    +   P YL +Y+IL  +
Sbjct: 72  ILLNNEDNVRKLNPEIVC-SVLQKSEIDDSVRLQNFFYWSSS-KMSTPQYLHSYSILAIR 129

Query: 267 VCKQCGIARA--------------IEVLDDMA---IEGCSPDIVTYNSLVNFSCKQGKYD 309
           +C    I +A              +E+LD +     E    ++  ++  ++     G  +
Sbjct: 130 LCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLN 189

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A  V    +S G  P  I  N L+  L          K+   M EA   P V+TY  +I
Sbjct: 190 EASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVI 249

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
              CK G V +     ++M  K C+P++ TYN  +G LC+ G ++EAL++  L+      
Sbjct: 250 KAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLG 308

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P   TY  L+DG  K+   ++A +++  M  +G++P+  T+  LI GF +   +EEA+ +
Sbjct: 309 PDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRI 368

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
             E+  RG K+    Y  +I G+ K+ ++  A+ +   M+ +  +PD   ++ ++
Sbjct: 369 KDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGLEPDTWTYNLLI 423



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 93/209 (44%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++ +FC  GK+ +A +L D M  +   P+      LI    + + +E+A ++   M  
Sbjct: 804  NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 863

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               +P+T+TY  ++    + G     I+L  +M   G   D I Y  +       GK  +
Sbjct: 864  RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLE 923

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A+      L +G       +  LI  +CK+  I+  +E+L +M  E  S    T N+L+ 
Sbjct: 924  ALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL 983

Query: 301  FSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
               K G  D+A  V+  +   G  P S++
Sbjct: 984  GFYKSGNEDEASKVLGVMQRLGWVPTSLS 1012



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 18/217 (8%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQP-----------------DIVTYNTVLGA 406
           +Y+IL   LC  GL+ +A N   +++     P                 ++  ++  +  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
               G LNEA  +          P LI  N L+  L K   M     +YG M+E  I PD
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             T+  +I   C+   V +   +L E+ K   K     Y   I GLC++  VD A++V +
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           LM+     PD   ++ +V        ++EA  +++ +
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337


>gi|357499777|ref|XP_003620177.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495192|gb|AES76395.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 612

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 235/452 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  T N ++  F   G    +  +   + ++   P+      LI+GL    +I +A 
Sbjct: 87  IASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQAL 146

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                +V  G   + + Y  ++ GLCK GQ  +A+ LL  +     +P+V+ YNTI+ +M
Sbjct: 147 HFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSM 206

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                  +A   + + + KG  P ++TY+ LI   C    +  AI + + M  E  +PD+
Sbjct: 207 CKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDV 266

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T++ LV+  CK+G+  +A  V+  ++ +G++P+ +TY +L+         +    I + 
Sbjct: 267 YTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNT 326

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +   +  V +YNI+ING CK   VD A+N F +M  KN  PD+VTYN+++  LCK G 
Sbjct: 327 MAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGK 386

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ AL+L+  ++        ITYN+++D L K   ++KA+ L  +M + GI PD  T+  
Sbjct: 387 ISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTI 446

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C+  ++++A ++ +++  +G  +    Y ++I G C +   D A+ +L  M  + 
Sbjct: 447 LIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNG 506

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+   +  I+  + +    + A KL +++I
Sbjct: 507 CIPNAKTYEIIILSLFEKDENDMAEKLLREMI 538



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 119/421 (28%), Positives = 206/421 (48%), Gaps = 8/421 (1%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHF---CI-NLIRGLIRIDRIE 169
           E +  T   +++  C +G++  A    D +        FH    C   LI GL ++ +  
Sbjct: 123 EPNAITLTTLIKGLCLKGQIHQALHFHDKVVALG----FHLNKVCYGTLINGLCKVGQTS 178

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A ++L+ +      P+ + YN ++  +CK   +  A  L  EM   G  PDV+TY+ ++
Sbjct: 179 AALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALI 238

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                 GK   AIG +   + +   P + T++IL++  CK+  +  A  VL  M  +G  
Sbjct: 239 SGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIK 298

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD+VTY SL++  C   + + A  + N +   G+  N  +YN +++        D    +
Sbjct: 299 PDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNL 358

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M+  +  P V TYN LI+GLCK G +  A+   ++M  +    D +TYN++L ALCK
Sbjct: 359 FKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCK 418

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              +++A+ LL  +      P + TY  LIDGL K G ++ A  ++  ++  G +    T
Sbjct: 419 NHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYT 478

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  +I GFC  D  ++A+ LL ++   G       Y ++I  L +  + DMA ++L  MI
Sbjct: 479 YTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMI 538

Query: 530 S 530
           +
Sbjct: 539 A 539



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 103/415 (24%), Positives = 214/415 (51%), Gaps = 1/415 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P F F   ++  L++I+  + A  + + M  +G   D +T+N+++    + G    + ++
Sbjct: 55  PIFEFG-KILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
              +   G EP+ IT  T+++ +   G+  QA+ F    +  G     + Y  LI  +CK
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
               + A+++L  +  +   P++V YN++++  CK    ++A  + + ++S+G+ P+ +T
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y+ L+      G  +    + + M     +P V+T++IL++G CK G V  A N    M+
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +  +PD+VTY +++   C    +N+A  + + +     +  + +YN +I+G  K   ++
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +AM L+ +M    I PD +T+ +LI G C++ ++  A+ L+ E+  RG       Y  ++
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             LCK+ +VD AI +L  M     +PD   ++ ++  +   G  ++A  +++ L+
Sbjct: 414 DALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLL 468



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 104/379 (27%), Positives = 196/379 (51%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P    +  ++G L K    ++AI+L  EM  +G   D++T+N ++      G    +   
Sbjct: 54  PPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSV 113

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           + + L+KG  P  IT T LI+ +C +  I +A+   D +   G   + V Y +L+N  CK
Sbjct: 114 FANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCK 173

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            G+   A+ ++  +  + ++PN + YNT++ S+      +    +   M     SP V T
Sbjct: 174 VGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVT 233

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y+ LI+G C  G ++ AI  FN+M+S+   PD+ T++ ++   CKEG + EA  +L ++ 
Sbjct: 234 YSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMM 293

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P ++TY +L+DG      + KA  ++  M + G++ +  ++  +I GFC+  +V+
Sbjct: 294 KQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVD 353

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA++L KE+  +        Y  +I GLCKS K+  A+++++ M       D   +++I+
Sbjct: 354 EAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSIL 413

Query: 545 KKVADDGMTEEAYKLWQKL 563
             +  +   ++A  L  K+
Sbjct: 414 DALCKNHQVDKAIALLTKM 432



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 99/375 (26%), Positives = 185/375 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G+ + A +L+  +  +   P+      +I  + ++  + +A  +   MV  G
Sbjct: 167 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 226

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TY+ ++ G C  G++  AI L ++M      PDV T++ ++      G+ K+A 
Sbjct: 227 ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAK 286

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 +++G  P ++TY  L++  C    + +A  + + MA  G + ++ +YN ++N  
Sbjct: 287 NVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF 346

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK  K D+A+ +   +  + + P+ +TYN+L+  L   G      K++D M++       
Sbjct: 347 CKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDK 406

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN +++ LCK   VD+AI    +M  +  QPD+ TY  ++  LCK G L +A  +   
Sbjct: 407 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFED 466

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L     +  + TY  +I G       +KA+ L  +M +NG  P+  T+  +I      D+
Sbjct: 467 LLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDE 526

Query: 483 VEEAVDLLKEIGKRG 497
            + A  LL+E+  RG
Sbjct: 527 NDMAEKLLREMIARG 541



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 171/355 (48%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG  V+ +    N I+ + C    + +A  L   M  +   PD      LI G   + ++
Sbjct: 188 DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKL 247

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
             A  +   M+     PD  T++++V G CK G+++ A  +L  M   G +PDV+TY ++
Sbjct: 248 NDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSL 307

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +       +  +A   +    + G    + +Y I+I   CK   +  A+ +  +M  +  
Sbjct: 308 MDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGFCKIKKVDEAMNLFKEMHCKNI 367

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD+VTYNSL++  CK GK   A+ +++ +  RG+  + ITYN++L +L      D    
Sbjct: 368 IPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 427

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M +    P ++TY ILI+GLCK G +  A N F  ++ K     + TY  ++   C
Sbjct: 428 LLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFEDLLVKGYNITVYTYTVMIQGFC 487

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
              + ++AL LL  +  + C P   TY  +I  L +K   + A  L  +M+  G+
Sbjct: 488 DNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDENDMAEKLLREMIARGL 542



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 92/328 (28%), Positives = 164/328 (50%), Gaps = 6/328 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T + ++  FC  GKL DA  L + M      PD +    L+ G  +  R+++A 
Sbjct: 227 ISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEINPDVYTFSILVDGFCKEGRVKEAK 286

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL +M+  G  PD +TY  ++ G C   Q+  A ++ + M+  G   +V +YN ++   
Sbjct: 287 NVLAMMMKQGIKPDVVTYCSLMDGYCLVKQVNKAKSIFNTMAQGGVTANVQSYNIMINGF 346

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K  +A+  +K+   K   P ++TY  LI+ +CK   I+ A++++D+M   G   D 
Sbjct: 347 CKIKKVDEAMNLFKEMHCKNIIPDVVTYNSLIDGLCKSGKISYALKLVDEMHDRGVPHDK 406

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TYNS+++  CK  + D A+ ++  +   G++P+  TY  L+  L   G       I + 
Sbjct: 407 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDMYTYTILIDGLCKGGRLKDAQNIFED 466

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +    ++ TV+TY ++I G C   L D+A+   ++M    C P+  TY  ++ +L ++  
Sbjct: 467 LLVKGYNITVYTYTVMIQGFCDNDLFDKALALLSKMEDNGCIPNAKTYEIIILSLFEKDE 526

Query: 413 LNEALQLLH------LLNGSSCSPCLIT 434
            + A +LL       LL G   + CL T
Sbjct: 527 NDMAEKLLREMIARGLLFGWKKAYCLFT 554



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 70/293 (23%), Positives = 127/293 (43%), Gaps = 37/293 (12%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLV--INNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           +P  +   SL +      + D+  LV   N +L+    P    +  +L SL    C+   
Sbjct: 16  NPKFIISTSLYSQLHHHHQDDEHSLVSSFNRILNINPTPPIFEFGKILGSLVKINCYQTA 75

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             +   M     +  + T+NILIN   + G    + + F  ++ K  +P+ +T  T++  
Sbjct: 76  ISLHREMEFNGIASDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKG 135

Query: 407 LCKEGMLNE-----------------------------------ALQLLHLLNGSSCSPC 431
           LC +G +++                                   ALQLL  ++G    P 
Sbjct: 136 LCLKGQIHQALHFHDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPN 195

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           ++ YNT+ID + K   + +A  LY +M+  GISPD +T+  LI GFC   ++ +A+ L  
Sbjct: 196 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFN 255

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           ++           + +++ G CK  +V  A  VL +M+    KPD   + +++
Sbjct: 256 KMISEEINPDVYTFSILVDGFCKEGRVKEAKNVLAMMMKQGIKPDVVTYCSLM 308



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 95/183 (51%)

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           ++SFN++++ N  P I  +  +LG+L K      A+ L   +  +  +  L+T+N LI+ 
Sbjct: 41  VSSFNRILNINPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIASDLVTFNILINC 100

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
            ++ G    +  ++  +++ G  P+ IT  TLI G C   Q+ +A+    ++   G  + 
Sbjct: 101 FSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHFHDKVVALGFHLN 160

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y  +I+GLCK  +   A+Q+L  +     +P+  +++TI+  +    +  EA+ L+ 
Sbjct: 161 KVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYS 220

Query: 562 KLI 564
           +++
Sbjct: 221 EMV 223



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 57/234 (24%), Positives = 107/234 (45%), Gaps = 9/234 (3%)

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           HSL S     + ++IL+I    + +P +F +  ++  L K      AI+   +M      
Sbjct: 38  HSLVS-----SFNRILNI----NPTPPIFEFGKILGSLVKINCYQTAISLHREMEFNGIA 88

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            D+VT+N ++    + G  + +  +   +      P  IT  TLI GL  KG + +A+  
Sbjct: 89  SDLVTFNILINCFSQLGHTHFSFSVFANILKKGYEPNAITLTTLIKGLCLKGQIHQALHF 148

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +++  G   + + + TLI G C+  Q   A+ LL+ +  +  +     Y  +I  +CK
Sbjct: 149 HDKVVALGFHLNKVCYGTLINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCK 208

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            K V+ A  +   M+S    PD   +S ++      G   +A  L+ K+I  ++
Sbjct: 209 VKLVNEAFDLYSEMVSKGISPDVVTYSALISGFCILGKLNDAIGLFNKMISEEI 262


>gi|224071479|ref|XP_002303480.1| predicted protein [Populus trichocarpa]
 gi|222840912|gb|EEE78459.1| predicted protein [Populus trichocarpa]
          Length = 836

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 225/433 (51%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A+ +  ++A++   P    C  L+  L++ + ++K+ +V   + + G +PD   ++ M+ 
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
             CK  +   AI L  +M   G  P+V+TYN I+  +  +G+  +A  F +  +++   P
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            LITY++ I  + K   I  A  VL +M+  G  P+ V YN+L++  CK G   +A+ + 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           +++LS+G+ PNS+T N+L+            + +L+ M          +++++IN LC  
Sbjct: 385 DDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLK 444

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
                A++   +M+ +N +P+     T++  LCK G   EA++L   L G    P ++T 
Sbjct: 445 FRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTS 504

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           N LI GL K G M++ + L   M+E G+  D IT+ TLI G C+  +V+E  +L +E+ K
Sbjct: 505 NALIHGLCKAGNMQETLKLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVK 564

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           +G +     + L++HGLC + K+D A ++      + Y P+   +  ++         EE
Sbjct: 565 KGIQPDIYTFNLLLHGLCNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEE 624

Query: 556 AYKLWQKLIEWKV 568
              L  +L+  K+
Sbjct: 625 GENLLNELVSKKL 637



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 229/456 (50%), Gaps = 1/456 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           S+  FV N E   N ++  +C  G +++A K+ D M  +   P+     +LI+G  + D+
Sbjct: 353 SELGFVPN-EVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQ 411

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I +A  VL+ M+  G   +  +++M++  LC + +  +A+  + EM +    P+     T
Sbjct: 412 IGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTT 471

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +   GK  +A+  W   L KG  P ++T   LI  +CK   +   +++L DM   G
Sbjct: 472 LVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERG 531

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D +TYN+L++  CK+GK  +   +   ++ +G++P+  T+N LLH L +    D   
Sbjct: 532 LVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEAS 591

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++     +  + P V+TY ++I+G CK   V+   N  N++VSK  + + V YN+++ A 
Sbjct: 592 RLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAY 651

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C  G +N A +L   +          TY++L+ GL   G ++ A  L  +M + G+ P+ 
Sbjct: 652 CINGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNV 711

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           + + T+I G+ +  Q+ +   +L+E+           Y ++I G CK  K   A ++L  
Sbjct: 712 VCYTTIIGGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNE 771

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M      PD   ++     +  +G  EEA+K+  ++
Sbjct: 772 MTEKGILPDAVTYNAFTNGLCKEGKVEEAFKVCDEM 807



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 216/445 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C  G+L +A +  + M +    P        I GLI++++I++A+ VL+ M
Sbjct: 293 TYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEKIDEANCVLKEM 352

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VP+ + YN ++ G CK G I  A+ + D+M   G  P+ +T N++++    + + 
Sbjct: 353 SELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNSLIQGFCKSDQI 412

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA    ++ + +G P    +++++I  +C +     A+  + +M +    P+     +L
Sbjct: 413 GQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTL 472

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  CK GK  +AV +   LL +G  PN +T N L+H L   G      K+L  M E   
Sbjct: 473 VSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGL 532

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TYN LI+G CK G V        +MV K  QPDI T+N +L  LC    ++EA +
Sbjct: 533 VFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASR 592

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L H    +   P + TY  +IDG  K   +E+   L  +++   +  + + + +LI  +C
Sbjct: 593 LWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYC 652

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
               +  A  L  ++  RG  +  + Y  ++HGLC    VD A  +L+ M      P+  
Sbjct: 653 INGNMNAAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVV 712

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++TI+   +  G   +   + Q++
Sbjct: 713 CYTTIIGGYSKLGQMNKVNIVLQEM 737



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/442 (28%), Positives = 216/442 (48%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           KT   +L +     +L  + ++ D +     IPD H    +I    +  R + A  +   
Sbjct: 222 KTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSK 281

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+ +TYN ++ GLCK G++  A    ++M      P +ITY+  +  +    K
Sbjct: 282 MEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSPSLITYSVFINGLIKLEK 341

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A    K+    G  P  + Y  LI+  CK   I+ A+++ DDM  +G SP+ VT NS
Sbjct: 342 IDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIRDDMLSKGISPNSVTLNS 401

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   CK  +   A  V+  ++ RG+  N  +++ +++ L  +  +      +  M   +
Sbjct: 402 LIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLCLKFRFVTALHFIREMLLRN 461

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P       L++GLCK G    A+  + +++ K   P+IVT N ++  LCK G + E L
Sbjct: 462 LRPNDGLLTTLVSGLCKAGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETL 521

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL  +         ITYNTLI G  K+G +++   L  +M++ GI PD  T   L+ G 
Sbjct: 522 KLLRDMLERGLVFDRITYNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGL 581

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C AD+++EA  L  E  K G       Y ++I G CK+ KV+    +L  ++S + + + 
Sbjct: 582 CNADKIDEASRLWHECKKNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNS 641

Query: 538 TVFSTIVKKVADDGMTEEAYKL 559
            V++++++    +G    A++L
Sbjct: 642 VVYNSLIRAYCINGNMNAAFRL 663



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 200/407 (49%), Gaps = 8/407 (1%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           LP + G F        + ++   C + +   A   I  M  RN  P+      L+ GL +
Sbjct: 427 LPINQGSF--------SMVINWLCLKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCK 478

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             +  +A ++   ++  G VP+ +T N ++ GLCK G ++  + LL +M   G   D IT
Sbjct: 479 AGKQGEAVELWCRLLGKGFVPNIVTSNALIHGLCKAGNMQETLKLLRDMLERGLVFDRIT 538

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YNT++      GK K+     ++ ++KG  P + T+ +L+  +C    I  A  +  +  
Sbjct: 539 YNTLISGCCKEGKVKEGFELKEEMVKKGIQPDIYTFNLLLHGLCNADKIDEASRLWHECK 598

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             G  P++ TY  +++  CK  K ++   ++N L+S+ +E NS+ YN+L+ +    G  +
Sbjct: 599 KNGYVPNVYTYGVMIDGYCKANKVEEGENLLNELVSKKLELNSVVYNSLIRAYCINGNMN 658

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
           A  ++ D M       +  TY+ L++GLC  GLVD A +  ++M  +   P++V Y T++
Sbjct: 659 AAFRLRDDMKSRGVLLSCATYSSLMHGLCNIGLVDDAKHLLDEMRKEGLLPNVVCYTTII 718

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
           G   K G +N+   +L  ++  +  P   TY  +IDG  K G  ++A  L  +M E GI 
Sbjct: 719 GGYSKLGQMNKVNIVLQEMSSHNIHPNKFTYTIMIDGFCKLGKTKEAAKLLNEMTEKGIL 778

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           PD +T+     G C+  +VEEA  +  E+      +    Y  +I G
Sbjct: 779 PDAVTYNAFTNGLCKEGKVEEAFKVCDEMSSGAVCLDEITYTTLIDG 825



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 198/411 (48%), Gaps = 40/411 (9%)

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
           +C+ LI  L+  D +  A ++L I ++ G VP     N       +  QI +   L+ E 
Sbjct: 123 YCV-LIHLLVGNDLLSPA-RLLLIRLIDGKVPAFYARNFESRHF-EIAQIMADFNLVFEP 179

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
            +     D++ +  +  T F +  F  A   +    +KG  P L T T L+  + K   +
Sbjct: 180 VIGVKIADLLVH--VYSTQFKHLGFGFAADVFSLLAKKGLFPSLKTCTFLLSSLVKANEL 237

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            ++ EV D + + G  PD+  +++++N  CK  + DDA+ + + +   G+ PN       
Sbjct: 238 KKSYEVYDFICLGGIIPDVHLFSTMINAFCKGHREDDAIGLFSKMEKLGVAPN------- 290

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
                                       V TYN +I+GLCK G +D A     +MV +  
Sbjct: 291 ----------------------------VVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKV 322

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P ++TY+  +  L K   ++EA  +L  ++     P  + YNTLIDG  K G + +A+ 
Sbjct: 323 SPSLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALK 382

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +   M+  GISP+ +T  +LI GFC++DQ+ +A ++L+E+  RG  +   ++ +VI+ LC
Sbjct: 383 IRDDMLSKGISPNSVTLNSLIQGFCKSDQIGQAENVLEEMIGRGLPINQGSFSMVINWLC 442

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              +   A+  +  M+    +P+D + +T+V  +   G   EA +LW +L+
Sbjct: 443 LKFRFVTALHFIREMLLRNLRPNDGLLTTLVSGLCKAGKQGEAVELWCRLL 493



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/195 (23%), Positives = 96/195 (49%)

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A + F+ +  K   P + T   +L +L K   L ++ ++   +      P +  ++T+I+
Sbjct: 205 AADVFSLLAKKGLFPSLKTCTFLLSSLVKANELKKSYEVYDFICLGGIIPDVHLFSTMIN 264

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
              K    + A+ L+ +M + G++P+ +T+  +I G C++ +++EA    +++ K     
Sbjct: 265 AFCKGHREDDAIGLFSKMEKLGVAPNVVTYNNIIHGLCKSGRLDEAYRFKEKMVKEKVSP 324

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y + I+GL K +K+D A  VL+ M    + P++ V++T++      G   EA K+ 
Sbjct: 325 SLITYSVFINGLIKLEKIDEANCVLKEMSELGFVPNEVVYNTLIDGYCKMGNISEALKIR 384

Query: 561 QKLIEWKVFEKGTTL 575
             ++   +     TL
Sbjct: 385 DDMLSKGISPNSVTL 399


>gi|449460383|ref|XP_004147925.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
 gi|449516585|ref|XP_004165327.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Cucumis sativus]
          Length = 701

 Score =  211 bits (538), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 139/518 (26%), Positives = 241/518 (46%), Gaps = 70/518 (13%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N +L  F    +  +A             P+      LI+   +  + EK   +L  
Sbjct: 115 RSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFEKGKGLLTW 174

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  +G  PD ++Y  ++  L K G +  A+ L DEMSV G  PDV+ YN ++      G 
Sbjct: 175 MFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILIDGFLRKGD 234

Query: 238 FKQAIGFWKDQLRKGCP-PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           F +A   WK  L +    P + TY I+I  +CK   +  ++E+ + M     SPD+ T++
Sbjct: 235 FVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFS 294

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-------CWDAVDK- 348
           S+++   K G ++ A  V   ++  G+ P+  TYN +L  L   G        W+ + K 
Sbjct: 295 SMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKN 354

Query: 349 --------------ILD------------IMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
                         +LD            +++E        TY +LINGLCK G +++A+
Sbjct: 355 NCCNIVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKAL 414

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH----------------LLNG- 425
               +  ++    D   Y++++  LCK+GML +A++L+H                L+NG 
Sbjct: 415 RILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGY 474

Query: 426 ------------------SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
                               C+P +++YNT+I+GL K      A +   +M+E G+ PD 
Sbjct: 475 VRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDM 534

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           IT+  LI G CR ++V+ A++L  +   +  K     + ++IHGLC ++KVD+A+++   
Sbjct: 535 ITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQ 594

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           M      PD    +TI++ +   G   EA K+W +++E
Sbjct: 595 MRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILE 632



 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 225/444 (50%), Gaps = 5/444 (1%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           SS  P VE    T N ++   C  GKL ++ ++ + M +  + PD     ++I GL +  
Sbjct: 249 SSVYPSVE----TYNIMINGLCKLGKLDESMEMWNRMKKNEKSPDLFTFSSMIHGLSKAG 304

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
               A KV Q M+ SG  PD  TYN M+ GL + G++     L + MS + C  ++++YN
Sbjct: 305 NFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFELWNVMSKNNC-CNIVSYN 363

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            +++ + DN K +QAI +W+    +G      TY +LI  +CK   + +A+ +L++   E
Sbjct: 364 MLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLCKNGYLNKALRILEEAENE 423

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G   D   Y+S+V+  CK+G  + AV +I+ +     + NS  +N+L++        +  
Sbjct: 424 GADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEA 483

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             +L  M     +PTV +YN +INGLCK      A  S  +M+ +  +PD++TY+ ++  
Sbjct: 484 ISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDG 543

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LC+   ++ AL L H        P L  +N +I GL     ++ A+ ++ QM +    PD
Sbjct: 544 LCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPD 603

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +TH T++ G  +A    EA+ +   I + G +    +Y +   GLC   +V  AI+ L 
Sbjct: 604 LVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLY 663

Query: 527 LMISSRYKPDDTVFSTIVKKVADD 550
             +     P+   ++ +V+ V DD
Sbjct: 664 DALDRGILPNAPTWNVLVRAVVDD 687



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/445 (24%), Positives = 223/445 (50%), Gaps = 3/445 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV- 179
           + IL+       +    +++D+M  +         ++ I+   +    ++A  + Q MV 
Sbjct: 47  HHILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQALNLFQNMVD 106

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           + G  P   ++N M+    +  Q R A         +G  P++ TYN +++      +F+
Sbjct: 107 IFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIKISCKKRQFE 166

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +  G        G  P +++Y  LI  + K   +  A+E+ D+M++ G +PD++ YN L+
Sbjct: 167 KGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNPDVMCYNILI 226

Query: 300 NFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   ++G +  A  +   LL+   + P+  TYN +++ L   G  D   ++ + M +   
Sbjct: 227 DGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEMWNRMKKNEK 286

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP +FT++ +I+GL K G  + A   F +M+     PD+ TYN +L  L + G LN+  +
Sbjct: 287 SPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIESGLSPDVRTYNAMLSGLFRTGKLNKCFE 346

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L ++++ ++C   +++YN LI GL     +E+A+  +  + E G+  D  T+  LI G C
Sbjct: 347 LWNVMSKNNCCN-IVSYNMLIQGLLDNKKVEQAICYWQLLHERGLKADSTTYGLLINGLC 405

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +   + +A+ +L+E    G  +   AY  ++HGLCK   ++ A++++  M  +R K +  
Sbjct: 406 KNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSH 465

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
           VF++++         EEA  + +++
Sbjct: 466 VFNSLINGYVRAFKLEEAISVLREM 490



 Score =  131 bits (330), Expect = 9e-28,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 152/296 (51%), Gaps = 1/296 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL +   + KA ++L+     G   DT  Y+ MV GLCK+G +  A+ L+ +M  + 
Sbjct: 400 LINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELIHQMKKNR 459

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            + +   +N+++       K ++AI   ++   K C P +++Y  +I  +CK    + A 
Sbjct: 460 RKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKAERFSDAY 519

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
             L +M  EG  PD++TY+ L++  C+  K D A+ + +  +++ ++P+   +N ++H L
Sbjct: 520 LSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMHNIIIHGL 579

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            +    D   +I   M + +  P + T+N ++ GL K G    A+  +++++    QPDI
Sbjct: 580 CTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEALKIWDRILEAGLQPDI 639

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA-KKGCMEKAM 452
           ++YN     LC    +++A++ L+        P   T+N L+  +   K  ME A+
Sbjct: 640 ISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLMEYAL 695



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/271 (27%), Positives = 134/271 (49%), Gaps = 3/271 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    + ++   C +G L  A +LI  M +  +  + H   +LI G +R  ++E+A  VL
Sbjct: 428 DTFAYSSMVHGLCKKGMLEQAVELIHQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVL 487

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      P  ++YN ++ GLCK  +   A   L EM   G +PD+ITY+ ++  +   
Sbjct: 488 REMKSKDCAPTVVSYNTIINGLCKAERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRG 547

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K   A+  W   + K   P L  + I+I  +C    +  A+E+   M    C PD+VT+
Sbjct: 548 EKVDMALNLWHQCINKRLKPDLQMHNIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTH 607

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS-RGCWDAVDKILDIMN 354
           N+++    K G   +A+ + + +L  G++P+ I+YN     L S     DA++ + D ++
Sbjct: 608 NTIMEGLYKAGDCVEALKIWDRILEAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALD 667

Query: 355 EASHSPTVFTYNILINGLC-KYGLVDRAINS 384
                P   T+N+L+  +     L++ A+N+
Sbjct: 668 RGI-LPNAPTWNVLVRAVVDDKPLMEYALNT 697



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 75/301 (24%), Positives = 144/301 (47%), Gaps = 2/301 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G L  A ++++         D     +++ GL +   +E+A +++
Sbjct: 393 DSTTYGLLINGLCKNGYLNKALRILEEAENEGADLDTFAYSSMVHGLCKKGMLEQAVELI 452

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +    ++  +N ++ G  +  ++  AI++L EM    C P V++YNTI+  +   
Sbjct: 453 HQMKKNRRKLNSHVFNSLINGYVRAFKLEEAISVLREMKSKDCAPTVVSYNTIINGLCKA 512

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +F  A    K+ L +G  P +ITY++LI+ +C+   +  A+ +      +   PD+  +
Sbjct: 513 ERFSDAYLSLKEMLEEGLKPDMITYSLLIDGLCRGEKVDMALNLWHQCINKRLKPDLQMH 572

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMN 354
           N +++  C   K D A+ +   +      P+ +T+NT++  L   G C +A+ KI D + 
Sbjct: 573 NIIIHGLCTAQKVDVALEIFTQMRQVNCVPDLVTHNTIMEGLYKAGDCVEAL-KIWDRIL 631

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           EA   P + +YNI   GLC    V  AI      + +   P+  T+N ++ A+  +  L 
Sbjct: 632 EAGLQPDIISYNITFKGLCSCARVSDAIEFLYDALDRGILPNAPTWNVLVRAVVDDKPLM 691

Query: 415 E 415
           E
Sbjct: 692 E 692



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 58/281 (20%), Positives = 111/281 (39%), Gaps = 74/281 (26%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           +H P VF +  ++  L    LV       + M ++ C        + + A  K  M ++A
Sbjct: 40  AHPPFVFHH--ILRRLMDPKLVVHVGRIVDLMRAQRCTCSEDVALSAIKAYAKCSMPDQA 97

Query: 417 LQLLH-LLNGSSCSPCLITYNTLIDGL--------------------------------- 442
           L L   +++   C+P + ++N++++                                   
Sbjct: 98  LNLFQNMVDIFGCNPGIRSFNSMLNAFIESNQWREAELFFTYFQTAGMSPNLQTYNILIK 157

Query: 443 --AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG--- 497
              KK   EK   L   M ENG++PD +++ TLI    ++  + +AV+L  E+  RG   
Sbjct: 158 ISCKKRQFEKGKGLLTWMFENGLNPDILSYGTLINALAKSGNLLDAVELFDEMSVRGVNP 217

Query: 498 ---------------------NKMRN------------SAYRLVIHGLCKSKKVDMAIQV 524
                                N++                Y ++I+GLCK  K+D ++++
Sbjct: 218 DVMCYNILIDGFLRKGDFVKANEIWKRLLTESSVYPSVETYNIMINGLCKLGKLDESMEM 277

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              M  +   PD   FS+++  ++  G    A K++Q++IE
Sbjct: 278 WNRMKKNEKSPDLFTFSSMIHGLSKAGNFNAAEKVFQEMIE 318


>gi|296085006|emb|CBI28421.3| unnamed protein product [Vitis vinifera]
          Length = 740

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 236/482 (48%), Gaps = 35/482 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++     +GK+ +A  ++  + + +  PD     +LI G  R   ++ A  V   M
Sbjct: 200 TFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRM 259

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM------------------------- 213
           V  G  P+++TY+ ++ GLC  G++  A+ +L+EM                         
Sbjct: 260 VKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYTYTLPITALCAIEHE 319

Query: 214 ----------SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                        GC P+V TY  ++  +   GK + AIG +   L++G  P  +TY  L
Sbjct: 320 EEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNAL 379

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I ++C     + A+++   M   G   +  TYN ++   C  G  + A+++   +L  G 
Sbjct: 380 INELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGP 439

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P  +TYNTL++   ++G  +   ++LD+M E    P  +TYN L++G  K+G ++ A  
Sbjct: 440 LPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKLESASF 499

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +MV     P+ V+Y  ++    K+G ++ AL LL  +    C+P + +YN +I+GL+
Sbjct: 500 YFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAVINGLS 559

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K+    +A  +  +M+E G+ P+ IT+ TLI G CR  + + A  +  ++ KR       
Sbjct: 560 KENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLY 619

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I+GLC+  K D A  +L+ M      PD+  F++++      G  + A+ L +++
Sbjct: 620 TYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRM 679

Query: 564 IE 565
           ++
Sbjct: 680 VD 681



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 197/388 (50%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C+     +A +L+  M +R   P+      LI GL R+ ++E A  +   M+  G VP+
Sbjct: 313 LCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKMLKEGLVPN 372

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T+TYN ++  LC  G+  +A+ +   M   G   +  TYN I++ +   G  ++A+  ++
Sbjct: 373 TVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFE 432

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             L+ G  P ++TY  LI     +  +  A  +LD M   GC PD  TYN LV+   K G
Sbjct: 433 KMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWG 492

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K + A      ++  G+ PN ++Y  L+      G  D    +L  M E   +P V +YN
Sbjct: 493 KLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYN 552

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +INGL K      A    ++MV +   P+++TY T++  LC+ G    A ++ H +   
Sbjct: 553 AVINGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKR 612

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            C P L TY++LI GL ++G  ++A +L  +M   G++PD++T  +LI GF    +++ A
Sbjct: 613 KCLPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHA 672

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             LL+ +   G K     Y +++ GL K
Sbjct: 673 FLLLRRMVDMGCKPNYRTYSVLLKGLQK 700



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 115/411 (27%), Positives = 201/411 (48%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  L+  L + + +E A  + + M+ SG  P  +T+N ++  L K+G++R A  +L ++ 
Sbjct: 166 CNTLLIQLAKFEMVEGARNLYKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIF 225

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
                PDV TY +++     N     A G +   +++GC P  +TY+ LI  +C +  + 
Sbjct: 226 QYDLSPDVFTYTSLILGHCRNRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVD 285

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+++L++M  +G  P + TY   +   C     ++A+ ++  +  RG  PN  TY  L+
Sbjct: 286 EALDMLEEMIEKGIEPTVYTYTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALI 345

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
             L   G  +    +   M +    P   TYN LIN LC  G    A+  F+ M      
Sbjct: 346 SGLSRLGKLEVAIGLYHKMLKEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSL 405

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            +  TYN ++  LC  G + +A+ L   +      P ++TYNTLI+G   KG +  A  L
Sbjct: 406 ANTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARL 465

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              M ENG  PD+ T+  L+ GF +  ++E A    +E+ + G      +Y  +I G  K
Sbjct: 466 LDLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSK 525

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             KVD+A+ +L+ M      P+   ++ ++  ++ +    EA K+  K++E
Sbjct: 526 DGKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVE 576



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 205/416 (49%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P  H  I +I+     + I + +  L  +   G      + N ++  L K   +  A  L
Sbjct: 126 PADHIRILMIKACRNEEEIRRVADFLNEISGMGFGFSLYSCNTLLIQLAKFEMVEGARNL 185

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
             +M  SG +P ++T+NT++  +   GK ++A        +    P + TYT LI   C+
Sbjct: 186 YKQMLNSGIQPSLLTFNTLINILSKKGKVREAELILSQIFQYDLSPDVFTYTSLILGHCR 245

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A  V D M  EGC P+ VTY++L+N  C +G+ D+A+ ++  ++ +G+EP   T
Sbjct: 246 NRNLDLAFGVFDRMVKEGCDPNSVTYSTLINGLCNEGRVDEALDMLEEMIEKGIEPTVYT 305

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y   + +L +    +   +++  M +    P V TY  LI+GL + G ++ AI  +++M+
Sbjct: 306 YTLPITALCAIEHEEEAIELVARMKKRGCRPNVQTYTALISGLSRLGKLEVAIGLYHKML 365

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +   P+ VTYN ++  LC  G  + AL++ H + G        TYN +I GL   G +E
Sbjct: 366 KEGLVPNTVTYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIE 425

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KAMVL+ +M++ G  P  +T+ TLI G+     V  A  LL  + + G +     Y  ++
Sbjct: 426 KAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELV 485

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            G  K  K++ A    + M+     P+   ++ ++   + DG  + A  L +++ E
Sbjct: 486 SGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEE 541



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 98/327 (29%), Positives = 166/327 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G+ + A K+   M     + +      +I+GL     IEKA  + + M
Sbjct: 375 TYNALINELCVGGRFSTALKIFHWMEGHGSLANTQTYNEIIKGLCLGGDIEKAMVLFEKM 434

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G +P  +TYN ++ G   +G + +A  LLD M  +GCEPD  TYN ++      GK 
Sbjct: 435 LKMGPLPTVVTYNTLINGYLTKGNVNNAARLLDLMKENGCEPDEWTYNELVSGFSKWGKL 494

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A  ++++ +  G  P  ++YT LI+   K   +  A+ +L  M   GC+P++ +YN++
Sbjct: 495 ESASFYFQEMVECGLNPNPVSYTALIDGHSKDGKVDIALSLLKRMEEMGCNPNVESYNAV 554

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   K+ ++ +A  + + ++ +G+ PN ITY TL+  L   G      KI   M +   
Sbjct: 555 INGLSKENRFSEAEKICDKMVEQGLLPNVITYTTLIDGLCRNGRTQFAFKIFHDMEKRKC 614

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P ++TY+ LI GLC+ G  D A     +M  K   PD VT+ +++      G ++ A  
Sbjct: 615 LPNLYTYSSLIYGLCQEGKADEAEILLKEMERKGLAPDEVTFTSLIDGFVVLGRIDHAFL 674

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKK 445
           LL  +    C P   TY+ L+ GL K+
Sbjct: 675 LLRRMVDMGCKPNYRTYSVLLKGLQKE 701



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 147/300 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           + +T N+I++  C  G +  A  L + M +   +P       LI G +    +  A+++L
Sbjct: 407 NTQTYNEIIKGLCLGGDIEKAMVLFEKMLKMGPLPTVVTYNTLINGYLTKGNVNNAARLL 466

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M  +G  PD  TYN +V G  K G++ SA     EM   G  P+ ++Y  ++     +
Sbjct: 467 DLMKENGCEPDEWTYNELVSGFSKWGKLESASFYFQEMVECGLNPNPVSYTALIDGHSKD 526

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+   K     GC P + +Y  +I  + K+   + A ++ D M  +G  P+++TY
Sbjct: 527 GKVDIALSLLKRMEEMGCNPNVESYNAVINGLSKENRFSEAEKICDKMVEQGLLPNVITY 586

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++  C+ G+   A  + +++  R   PN  TY++L++ L   G  D  + +L  M  
Sbjct: 587 TTLIDGLCRNGRTQFAFKIFHDMEKRKCLPNLYTYSSLIYGLCQEGKADEAEILLKEMER 646

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P   T+  LI+G    G +D A     +MV   C+P+  TY+ +L  L KE +L E
Sbjct: 647 KGLAPDEVTFTSLIDGFVVLGRIDHAFLLLRRMVDMGCKPNYRTYSVLLKGLQKECLLLE 706


>gi|358344944|ref|XP_003636545.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355502480|gb|AES83683.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1280

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 137/485 (28%), Positives = 250/485 (51%), Gaps = 19/485 (3%)

Query: 84  VLAVNKKLRGLTITKKSHDPSLPS----SDGPFVENDEKTNNKILQNFCSRGKLTDASKL 139
           ++  NK L  L I  K+H P++ S     +   V+ D  T + ++  +C  G++T A   
Sbjct: 66  IVEFNKILTYL-IKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFA--- 121

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK 199
             + A+   I     C+N         ++ +A      ++  G   + +TY +++ GLCK
Sbjct: 122 FSVFAK---ILKMGLCLN--------GKVNEALLFHDHVLALGFHLNHVTYGILINGLCK 170

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
            GQ R+A+ +L ++       +V+ Y+TI+  +  +     A G + + + K  PP ++T
Sbjct: 171 MGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVT 230

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           ++ LI   C       A  + ++M ++  +PD  T+N LV+  CK+GK  +A  VI  ++
Sbjct: 231 FSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVMM 290

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
             G+EP  +TYNTL+              +L I++    +P   +YNI+ING CK  +VD
Sbjct: 291 KEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMVD 350

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A+  F++M  +   P  VTYN+++  LCK G +  A +L+  ++ +     ++TYN+LI
Sbjct: 351 EALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSLI 410

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           D   K   ++KA+ L  ++ E+GI P+  T+  LI G C+  Q++ A D+ +++  +G  
Sbjct: 411 DVFCKNQHVDKAIALVKKIKEHGIQPNMCTYNILIDGLCKGGQLKNAQDVFQDLLIKGYN 470

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +    Y ++I+GLCK    D A  +L  M  +   PD   + TI++ +      E+A KL
Sbjct: 471 VNAWTYNIMINGLCKEGLFDEAEVLLSKMEDNGIIPDAVTYETIIQALFHKDENEKAQKL 530

Query: 560 WQKLI 564
            ++++
Sbjct: 531 LREMV 535



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 192/376 (51%), Gaps = 8/376 (2%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I GL +   +  A  +   M++    P  +T++ ++ G C  G+ + A  L +EM +  
Sbjct: 199 IIDGLCKDKLVTDAYGLYSEMIVKRIPPTVVTFSSLIYGFCIVGKFKDAFRLFNEMVMKN 258

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PD  T+N ++  +   GK K+A       +++G  P ++TY  L++  C    + +A 
Sbjct: 259 INPDAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAK 318

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            VL  ++    +P+  +YN ++N  CK    D+A+ + + +  RG+ P+ +TYN+L+  L
Sbjct: 319 HVLSIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGL 378

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      +++D M+       + TYN LI+  CK   VD+AI    ++     QP++
Sbjct: 379 CKAGRIPYAWELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNM 438

Query: 398 VTYNTVLGALCKEGMLNEALQLLH--LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
            TYN ++  LCK G L  A  +    L+ G + +    TYN +I+GL K+G  ++A VL 
Sbjct: 439 CTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAW--TYNIMINGLCKEGLFDEAEVLL 496

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M +NGI PD +T+ T+I      D+ E+A  LL+E+  +G       Y   I      
Sbjct: 497 SKMEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKG----VVVYAFEIRRTLVG 552

Query: 516 KKVDMAIQVLELMISS 531
           + +++ + ++ L+ S+
Sbjct: 553 RTLNLGMNLISLLFSA 568



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 96/382 (25%), Positives = 177/382 (46%), Gaps = 15/382 (3%)

Query: 185 PDTITYNMMVGGLCK-RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           P  + +N ++  L K +    + ++L  +M   G +PD+ T + ++      G+   A  
Sbjct: 64  PSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTLSILINCYCHLGQMTFAFS 123

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +   L+ G              +C    +  A+   D +   G   + VTY  L+N  C
Sbjct: 124 VFAKILKMG--------------LCLNGKVNEALLFHDHVLALGFHLNHVTYGILINGLC 169

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K G+   A+ V+  +  + +  N + Y+T++  L           +   M      PTV 
Sbjct: 170 KMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIPPTVV 229

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           T++ LI G C  G    A   FN+MV KN  PD  T+N ++ ALCKEG + EA  ++ ++
Sbjct: 230 TFSSLIYGFCIVGKFKDAFRLFNEMVMKNINPDAYTFNILVDALCKEGKIKEAKNVIAVM 289

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P ++TYNTL+DG      + KA  +   +    ++P+  ++  +I GFC+   V
Sbjct: 290 MKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVLSIISRMRVAPNSRSYNIMINGFCKIKMV 349

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA+ L  E+  RG       Y  +I GLCK+ ++  A ++++ M ++    D   ++++
Sbjct: 350 DEALCLFHEMCCRGIAPHKVTYNSLIDGLCKAGRIPYAWELVDEMHNNCIPADIVTYNSL 409

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           +     +   ++A  L +K+ E
Sbjct: 410 IDVFCKNQHVDKAIALVKKIKE 431



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 146/311 (46%), Gaps = 10/311 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C  GK+ +A  +I +M +    P       L+ G   ++ + KA  VL
Sbjct: 262 DAYTFNILVDALCKEGKIKEAKNVIAVMMKEGVEPTVVTYNTLMDGYCLVNEVGKAKHVL 321

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            I+      P++ +YN+M+ G CK   +  A+ L  EM   G  P  +TYN+++  +   
Sbjct: 322 SIISRMRVAPNSRSYNIMINGFCKIKMVDEALCLFHEMCCRGIAPHKVTYNSLIDGLCKA 381

Query: 236 GKFKQAIGFWK--DQLRKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           G+   A   W+  D++   C P  ++TY  LI+  CK   + +AI ++  +   G  P++
Sbjct: 382 GRIPYA---WELVDEMHNNCIPADIVTYNSLIDVFCKNQHVDKAIALVKKIKEHGIQPNM 438

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN L++  CK G+  +A  V  +LL +G   N+ TYN +++ L   G +D  + +L  
Sbjct: 439 CTYNILIDGLCKGGQLKNAQDVFQDLLIKGYNVNAWTYNIMINGLCKEGLFDEAEVLLSK 498

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +    P   TY  +I  L      ++A     +MV K     +V Y   +        
Sbjct: 499 MEDNGIIPDAVTYETIIQALFHKDENEKAQKLLREMVIKG----VVVYAFEIRRTLVGRT 554

Query: 413 LNEALQLLHLL 423
           LN  + L+ LL
Sbjct: 555 LNLGMNLISLL 565



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 53/210 (25%), Positives = 91/210 (43%), Gaps = 22/210 (10%)

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEALQLLHLLNGSSCSPCLITY 435
           +VD A+ SFN+M      P IV +N +L  L K +      L L   +      P L T 
Sbjct: 46  VVDNAVLSFNRMRQIRQTPSIVEFNKILTYLIKTKNHYPTVLSLSTQMESKGVKPDLFTL 105

Query: 436 NTLID---------------------GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           + LI+                     GL   G + +A++ +  ++  G   + +T+  LI
Sbjct: 106 SILINCYCHLGQMTFAFSVFAKILKMGLCLNGKVNEALLFHDHVLALGFHLNHVTYGILI 165

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+  Q   A+ +L++I  +        Y  +I GLCK K V  A  +   MI  R  
Sbjct: 166 NGLCKMGQTRAALQVLRQIEGKLVNTNVVMYSTIIDGLCKDKLVTDAYGLYSEMIVKRIP 225

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           P    FS+++      G  ++A++L+ +++
Sbjct: 226 PTVVTFSSLIYGFCIVGKFKDAFRLFNEMV 255


>gi|242055005|ref|XP_002456648.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
 gi|241928623|gb|EES01768.1| hypothetical protein SORBIDRAFT_03g040130 [Sorghum bicolor]
          Length = 702

 Score =  211 bits (538), Expect = 7e-52,   Method: Compositional matrix adjust.
 Identities = 132/484 (27%), Positives = 228/484 (47%), Gaps = 36/484 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T N IL++ C+RG +  A  L   + RR   PD      L+ GL + D+++ A  +L  
Sbjct: 159 QTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDE 218

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNG 236
           M   G   D + YN ++ G  + G    A+ + +++    G  P++ TY  +L  +   G
Sbjct: 219 MPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLG 278

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +FK+A   W   +        +TY ILI  +C+   +  A  V  DM   G   D+  YN
Sbjct: 279 RFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYN 338

Query: 297 SLVNFSCKQGKYDDA-------------VLVINNLLSRGM-------------------- 323
           SL+   C+ G+  +A              +   N++++G+                    
Sbjct: 339 SLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQLENDA 398

Query: 324 --EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
              P+ +T+ TL+H L   G  +   +IL+    +     VF+Y+ +IN  CK G    A
Sbjct: 399 SCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDA 458

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
              +  MV   C+P+   YN ++   C+   +N+A+++   +  + C P +ITYNTLIDG
Sbjct: 459 NEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDG 518

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L K    ++A  L  +M+E G  PD  T+ +LI G CR  +V+ A+ +  EI   G ++ 
Sbjct: 519 LCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVD 578

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              + ++IHGLC + KVD A  +   M      P+   ++T++    + G  ++A  LW 
Sbjct: 579 VMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWT 638

Query: 562 KLIE 565
            +++
Sbjct: 639 AILD 642



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/385 (29%), Positives = 194/385 (50%), Gaps = 2/385 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + D  T   ++   C  G +  A+++   M +   + D     +LI+G   + R  +A K
Sbjct: 296 QADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGFCEVGRTGEAWK 355

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTM 232
                  SG +    TYN+M  GL   G +  A  LL ++ + + C PD +T+ T++  +
Sbjct: 356 FWDSTGFSG-IRQITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPDKVTFGTLIHGL 414

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            +NG   +A    +D    G    + +Y+ +I + CK      A EV  +M  +GC P+ 
Sbjct: 415 CENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYKNMVKDGCKPNS 474

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             YN+L+N  C+  K +DA+ +   + S G  P  ITYNTL+  L     +     +   
Sbjct: 475 HVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKAEKYQEASSLTKE 534

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E    P + TY  LI GLC+   VD A+  +++++    Q D++ +N ++  LC  G 
Sbjct: 535 MLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVHNILIHGLCSAGK 594

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA  +   +   +CSP L+TYNTL+DG  + G ++KA  L+  +++NG+ PD +T+ T
Sbjct: 595 VDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILDNGLKPDIVTYNT 654

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
            I G C  ++  E V LL E+   G
Sbjct: 655 RIKGLCSCNRTPEGVLLLNEVLATG 679



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/362 (30%), Positives = 186/362 (51%), Gaps = 6/362 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRN--QIPDFHFCINLIRGLIRIDRIEKASK 173
           D    N +++ FC  G+  +A K  D        QI  ++    + +GL+    + +A++
Sbjct: 333 DVSVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNI---MTKGLLDSGMVSEATE 389

Query: 174 VL-QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +L Q+   +   PD +T+  ++ GLC+ G    A  +L++   SG E DV +Y++++   
Sbjct: 390 LLKQLENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRF 449

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G+   A   +K+ ++ GC P    Y  LI   C+   I  AI++  +M   GC P I
Sbjct: 450 CKDGRTHDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTI 509

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TYN+L++  CK  KY +A  +   +L RG +P+  TY +L+  L      D   +I D 
Sbjct: 510 ITYNTLIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDE 569

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + +A     V  +NILI+GLC  G VD A   + +M  KNC P++VTYNT++    + G 
Sbjct: 570 ILDAGLQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGS 629

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +++A  L   +  +   P ++TYNT I GL       + ++L  +++  GI P  IT   
Sbjct: 630 IDKAASLWTAILDNGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSI 689

Query: 473 LI 474
           L+
Sbjct: 690 LV 691



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 206/453 (45%), Gaps = 71/453 (15%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM----------- 232
            P+  TYN+++  LC RG +  A++L   +   G  PD +TY+T++  +           
Sbjct: 155 APNLQTYNIILRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALD 214

Query: 233 ------------------------FDNGKFKQAIGFWKDQLR-KGCPPYLITYTILIEQV 267
                                   F  G F++A+  W+  +R  G  P L TY ++++ +
Sbjct: 215 LLDEMPNYGVQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGL 274

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CK      A EV   M       D VTY  L++  C+ G  D A  V ++++  G+  + 
Sbjct: 275 CKLGRFKEAGEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDV 334

Query: 328 ITYNTLLHSLGSRG-------CWD----------------------------AVDKILDI 352
             YN+L+      G        WD                            A + +  +
Sbjct: 335 SVYNSLIKGFCEVGRTGEAWKFWDSTGFSGIRQITTYNIMTKGLLDSGMVSEATELLKQL 394

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
            N+AS SP   T+  LI+GLC+ G  +RA        +   + D+ +Y++++   CK+G 
Sbjct: 395 ENDASCSPDKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGR 454

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            ++A ++   +    C P    YN LI+G  +   +  A+ +Y +M  NG  P  IT+ T
Sbjct: 455 THDANEVYKNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNT 514

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C+A++ +EA  L KE+ +RG K     Y  +I GLC+ KKVD+A+++ + ++ + 
Sbjct: 515 LIDGLCKAEKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAG 574

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            + D  V + ++  +   G  +EA+ ++ ++ E
Sbjct: 575 LQVDVMVHNILIHGLCSAGKVDEAFCIYLEMKE 607



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/454 (25%), Positives = 219/454 (48%), Gaps = 3/454 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARR-NQIPDFHFCINLIRGLIRIDRIEKA 171
           V+ D    N +L      G    A K+ + + R     P+      ++ GL ++ R ++A
Sbjct: 224 VQADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEA 283

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +V   M+ +    DT+TY +++ GLC+ G + SA  +  +M  +G   DV  YN++++ 
Sbjct: 284 GEVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKG 343

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSP 290
             + G+  +A  FW      G    + TY I+ + +     ++ A E+L  +  +  CSP
Sbjct: 344 FCEVGRTGEAWKFWDSTGFSGIRQ-ITTYNIMTKGLLDSGMVSEATELLKQLENDASCSP 402

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D VT+ +L++  C+ G  + A  ++ +  + G E +  +Y+++++     G     +++ 
Sbjct: 403 DKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVY 462

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M +    P    YN LING C+   ++ AI  + +M S  C P I+TYNT++  LCK 
Sbjct: 463 KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKA 522

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
               EA  L   +      P + TY +LI GL +   ++ A+ ++ ++++ G+  D + H
Sbjct: 523 EKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVH 582

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             LI G C A +V+EA  +  E+ ++        Y  ++ G  +   +D A  +   ++ 
Sbjct: 583 NILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILD 642

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +  KPD   ++T +K +     T E   L  +++
Sbjct: 643 NGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVL 676



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 90/364 (24%), Positives = 186/364 (51%), Gaps = 7/364 (1%)

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD----QLRKGCPPYLITYTIL 263
           A  D  S+ GC P V ++NT+L       ++  A  F+         +   P L TY I+
Sbjct: 105 AFRDLPSLLGCNPGVRSHNTLLDAFVRARRYSDADAFFASLSHGAFGRRIAPNLQTYNII 164

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           +  +C +  + RA+ +   +   G +PD VTY++L++   K  + D+A+ +++ + + G+
Sbjct: 165 LRSLCARGDVDRAVSLFSSLRRRGVAPDRVTYSTLMSGLAKHDQLDNALDLLDEMPNYGV 224

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILD-IMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + +++ YN LL      G ++   K+ + ++ +   SP + TY ++++GLCK G    A 
Sbjct: 225 QADAVCYNALLSGCFRTGMFEKAMKVWEQLVRDPGASPNLATYKVMLDGLCKLGRFKEAG 284

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             +++M++ N Q D VTY  ++  LC+ G ++ A ++   +  +     +  YN+LI G 
Sbjct: 285 EVWSRMMANNHQADTVTYGILIHGLCRSGDVDSAARVYSDMVKAGLVLDVSVYNSLIKGF 344

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            + G   +A   +     +GI     T+  +  G   +  V EA +LLK++    +   +
Sbjct: 345 CEVGRTGEAWKFWDSTGFSGIR-QITTYNIMTKGLLDSGMVSEATELLKQLENDASCSPD 403

Query: 503 S-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              +  +IHGLC++   + A ++LE   +S  + D   +S+++ +   DG T +A ++++
Sbjct: 404 KVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVYK 463

Query: 562 KLIE 565
            +++
Sbjct: 464 NMVK 467



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 76/296 (25%), Positives = 143/296 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T   ++   C  G    A ++++      +  D     ++I    +  R   A++V 
Sbjct: 403 DKVTFGTLIHGLCENGYANRAFEILEDARNSGEELDVFSYSSMINRFCKDGRTHDANEVY 462

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV  G  P++  YN ++ G C+  +I  AI +  EM+ +GC P +ITYNT++  +   
Sbjct: 463 KNMVKDGCKPNSHVYNALINGFCRVSKINDAIKIYIEMTSNGCCPTIITYNTLIDGLCKA 522

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K+++A    K+ L +G  P + TY  LI  +C+   +  A+ + D++   G   D++ +
Sbjct: 523 EKYQEASSLTKEMLERGFKPDIRTYASLIRGLCRDKKVDVALRIWDEILDAGLQVDVMVH 582

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  C  GK D+A  +   +  +   PN +TYNTL+      G  D    +   + +
Sbjct: 583 NILIHGLCSAGKVDEAFCIYLEMKEKNCSPNLVTYNTLMDGFYEIGSIDKAASLWTAILD 642

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
               P + TYN  I GLC        +   N++++    P ++T++ ++ A+ K G
Sbjct: 643 NGLKPDIVTYNTRIKGLCSCNRTPEGVLLLNEVLATGIMPTVITWSILVRAVIKYG 698


>gi|225454300|ref|XP_002275491.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial [Vitis vinifera]
 gi|297745328|emb|CBI40408.3| unnamed protein product [Vitis vinifera]
          Length = 765

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 233/453 (51%), Gaps = 11/453 (2%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +++   C  G+   A  ++  + +   + +   C  L+  L R    ++ + +L  M   
Sbjct: 275 QLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRAREFKRMNTLLAEMKEM 334

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-----CEPDVITYNTILRTMFDNG 236
              P+ +T+ +++  LCK  ++  A+ + ++M+         EPDVITYNT++  +   G
Sbjct: 335 DIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEPDVITYNTLIDGLCKVG 394

Query: 237 KFKQAIGF---WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           + ++ +G     + Q R  C P  +TY  LI+  CK   I  A E+ D M  +G  P++V
Sbjct: 395 RQEEGLGLVERMRSQPR--CMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVV 452

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T N+LV+  CK G+ + AV   N +  +G++ N++TY  L+ +  +    +   ++ D M
Sbjct: 453 TLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEM 512

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            EA  SP    Y  LI+GL + G +DRA    ++M      PDIV++N ++   C++  L
Sbjct: 513 LEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKL 572

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +EA ++L  +  +   P  +TYNTLI   +K G    A  L  +M++ G+ P  +T+  L
Sbjct: 573 DEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGAL 632

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSR 532
           I  +C    ++EA+ + +++        N+  Y ++I+ LC+  +VD+A+ +++ M    
Sbjct: 633 IHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKG 692

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KP+   F+ + K + +     +A++L  ++ E
Sbjct: 693 VKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTE 725



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 187/368 (50%), Gaps = 2/368 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRID 166
           S+G  VE D  T N ++   C  G+  +   L++ M  + + +P+      LI G  +  
Sbjct: 371 SNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKAS 430

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
            IE A ++   M   G  P+ +T N +V G+CK G+I  A+   +EM   G + + +TY 
Sbjct: 431 MIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYT 490

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++R   +    ++A+  + + L  GC P  I Y  LI  + +   + RA  VL  M   
Sbjct: 491 ALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEA 550

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G SPDIV++N L+N  C++ K D+A  ++  + + G++P+ +TYNTL+      G +   
Sbjct: 551 GFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTA 610

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLG 405
            +++  M +    PTV TY  LI+  C  G +D A+  F  M S +   P+ V YN ++ 
Sbjct: 611 HRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKVPPNTVIYNILIN 670

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           +LC++  ++ AL L+  +      P   T+N +  GL +K  + KA  L  +M E+  +P
Sbjct: 671 SLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFELMDRMTEHACNP 730

Query: 466 DDITHRTL 473
           D IT   L
Sbjct: 731 DYITMEIL 738



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 112/413 (27%), Positives = 200/413 (48%), Gaps = 11/413 (2%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGV-------PDTITYNMMVGGLCKRGQIRSAIALL 210
           LI  L +  R+++A +V +   M+GG        PD ITYN ++ GLCK G+    + L+
Sbjct: 346 LINHLCKFRRVDEALEVFE--KMNGGESNGFLVEPDVITYNTLIDGLCKVGRQEEGLGLV 403

Query: 211 DEM-SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           + M S   C P+ +TYN ++         + A   +    + G PP ++T   L++ +CK
Sbjct: 404 ERMRSQPRCMPNTVTYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCK 463

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              I  A+E  ++M  +G   + VTY +L+   C     + A+ + + +L  G  P++I 
Sbjct: 464 HGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIV 523

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y TL+  L   G  D    +L  M EA  SP + ++N+LING C+   +D A     +M 
Sbjct: 524 YYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEME 583

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           +   +PD VTYNT++    K G  + A +L+  +      P ++TY  LI      G ++
Sbjct: 584 NAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLD 643

Query: 450 KAMVLYGQMMENG-ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           +AM ++  M     + P+ + +  LI   CR +QV+ A+ L+ ++  +G K   + +  +
Sbjct: 644 EAMKIFRDMSSTSKVPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAM 703

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             GL +   +  A ++++ M      PD      + + ++  G T +     Q
Sbjct: 704 FKGLQEKNWLSKAFELMDRMTEHACNPDYITMEILTEWLSAVGETAKLKSFVQ 756



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 94/329 (28%), Positives = 157/329 (47%), Gaps = 1/329 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C    +  A +L D M +    P+      L+ G+ +  RI  A +    M
Sbjct: 418 TYNCLIDGYCKASMIEAARELFDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEM 477

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G   + +TY  ++   C    I  A+ L DEM  +GC PD I Y T++  +   GK 
Sbjct: 478 QGKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKL 537

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A          G  P ++++ +LI   C++  +  A E+L +M   G  PD VTYN+L
Sbjct: 538 DRASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTL 597

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K G +  A  ++  ++  G+ P  +TY  L+H+    G  D   KI   M+  S 
Sbjct: 598 ISHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSK 657

Query: 359 -SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P    YNILIN LC+   VD A++  + M  K  +P+  T+N +   L ++  L++A 
Sbjct: 658 VPPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAF 717

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +L+  +   +C+P  IT   L + L+  G
Sbjct: 718 ELMDRMTEHACNPDYITMEILTEWLSAVG 746



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/481 (24%), Positives = 224/481 (46%), Gaps = 54/481 (11%)

Query: 137 SKLIDIM--ARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMM 193
           +KL+D+   ++ ++IP   +    LIR   R   ++++  V   +  S  +  T   N++
Sbjct: 141 NKLLDLFKTSKSHKIPLSVNAATLLIRCFGRAQMVDESFLVYNELCPSRRL--THIRNIL 198

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCE--PDVITYNTILRTMFDNGKFKQAI------GFW 245
           +  L ++G++  A+ LLDEM     E  P+  T + +   +    K  +A+      G  
Sbjct: 199 IDVLFRKGRVDDALHLLDEMLQPKAEFPPNSNTGHIVFSALSKRDKVGRAVDEEEIVGLV 258

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
                    P  I  T LI ++C+     RA +VL  +   G   +  + N+L+    + 
Sbjct: 259 SKFAEHEVFPNSIWLTQLISRLCRSGRTDRAWDVLHGLMKLGGVMEAASCNALLTALGRA 318

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS-----P 360
            ++     ++  +    ++PN +T+  L++ L      D   ++ + MN    +     P
Sbjct: 319 REFKRMNTLLAEMKEMDIQPNVVTFGILINHLCKFRRVDEALEVFEKMNGGESNGFLVEP 378

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEALQL 419
            V TYN LI+GLCK G  +  +    +M S+  C P+ VTYN ++   CK  M+  A +L
Sbjct: 379 DVITYNTLIDGLCKVGRQEEGLGLVERMRSQPRCMPNTVTYNCLIDGYCKASMIEAAREL 438

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKG-------------------------------C- 447
              +N     P ++T NTL+DG+ K G                               C 
Sbjct: 439 FDQMNKDGVPPNVVTLNTLVDGMCKHGRINGAVEFFNEMQGKGLKGNAVTYTALIRAFCN 498

Query: 448 ---MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              +EKAM L+ +M+E G SPD I + TLI G  +A +++ A  +L ++ + G      +
Sbjct: 499 VNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLDRASFVLSKMKEAGFSPDIVS 558

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + ++I+G C+  K+D A ++L+ M ++  KPD   ++T++   +  G    A++L +K++
Sbjct: 559 FNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLISHFSKTGDFSTAHRLMKKMV 618

Query: 565 E 565
           +
Sbjct: 619 K 619



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 74/268 (27%), Positives = 138/268 (51%), Gaps = 1/268 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  ++ +  T   +++ FC+   +  A +L D M      PD      LI GL +  +++
Sbjct: 479 GKGLKGNAVTYTALIRAFCNVNNIEKAMELFDEMLEAGCSPDAIVYYTLISGLSQAGKLD 538

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +AS VL  M  +G  PD +++N+++ G C++ ++  A  +L EM  +G +PD +TYNT++
Sbjct: 539 RASFVLSKMKEAGFSPDIVSFNVLINGFCRKNKLDEAYEMLKEMENAGIKPDGVTYNTLI 598

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM-AIEGC 288
                 G F  A    K  +++G  P ++TY  LI   C    +  A+++  DM +    
Sbjct: 599 SHFSKTGDFSTAHRLMKKMVKEGLVPTVVTYGALIHAYCLNGNLDEAMKIFRDMSSTSKV 658

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P+ V YN L+N  C++ + D A+ +++++  +G++PN+ T+N +   L  +       +
Sbjct: 659 PPNTVIYNILINSLCRKNQVDLALSLMDDMKVKGVKPNTNTFNAMFKGLQEKNWLSKAFE 718

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYG 376
           ++D M E + +P   T  IL   L   G
Sbjct: 719 LMDRMTEHACNPDYITMEILTEWLSAVG 746


>gi|225435038|ref|XP_002281336.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900 [Vitis vinifera]
          Length = 900

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 122/429 (28%), Positives = 218/429 (50%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A  L D +      PD +    ++R L  +    +A +V+  M  SG      TYN+ + 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
           GLCK  ++  A+ + + +S  G   DV TY T++  +    +F+       + +  G  P
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVP 318

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
                + L++ + K+  I  A ++++ +   G +P +  YN+L+N  CK GK D+A  + 
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           NN+  +G+ PN +TY+ L+ S   RG  D     L  M E     TV+ Y+ LI+G CK 
Sbjct: 379 NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G +  A + F++M++   +P++V Y +++   CKEG L+ A +L H + G   SP   T+
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
             LI GL     M +A  L+G+M+E  + P+++T+  LI G C+      A +LL E+ +
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE 558

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           +G       YR +I GLC + +V  A + +  +   + K ++  FS ++     +G  ++
Sbjct: 559 KGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDD 618

Query: 556 AYKLWQKLI 564
           A    ++++
Sbjct: 619 ALDACREML 627



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 122/423 (28%), Positives = 218/423 (51%), Gaps = 3/423 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C  G+L +A +L   M  +   P+ +    LI GL   +R+ +A+K+   MV   
Sbjct: 466 LISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWN 525

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +P+ +TYN+++ G CK G    A  LLDEM   G  PD  TY  ++  +   G+  +A 
Sbjct: 526 VIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAR 585

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            F  D   +      + ++ L+   CK+  +  A++   +M   G + D+V Y+ L+   
Sbjct: 586 EFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGI 645

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            +Q      + ++  +  +G+ P+++ Y T++ +    G       + DIM      P V
Sbjct: 646 LRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNV 705

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH- 421
            TY  LINGLCK GL+D+A     +M++ N  P+  TY   L  L  EG + +A+QL   
Sbjct: 706 VTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDV 765

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           LL G   +   +TYN LI G  K G +++A  +   M+++GISPD I++ T+I+ +CR  
Sbjct: 766 LLEGFLANT--VTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRG 823

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            ++EA+ L + +  RG      AY  +I+G C + ++  A ++ + M+    KP+   ++
Sbjct: 824 DLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYN 883

Query: 542 TIV 544
           +++
Sbjct: 884 SLI 886



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 218/446 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  ++  C   ++ +A ++ ++++ +    D      L+ GL +++  E   +++  M
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G VP     + +V GL K+G I SA  L++++   G  P +  YN ++ +M  +GK 
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   + +   KG  P  +TY+ILI+  CK+  +  A+  L  M   G    +  Y+SL
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK   A  + + +++ G++PN + Y +L+      G      ++   M     
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP  +T+  LI+GLC    +  A   F +MV  N  P+ VTYN ++   CKEG    A +
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +      P   TY  LI GL   G + +A      +       +++    L+ G+C
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYC 611

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  ++++A+D  +E+  RG  M    Y ++I+G+ + +     I +L+ M     +PD+ 
Sbjct: 612 KEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNV 671

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
           +++T++   A  G  + A+ LW  ++
Sbjct: 672 LYTTMIDANAKAGNLKMAFGLWDIMV 697



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 125/454 (27%), Positives = 218/454 (48%), Gaps = 3/454 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T + ++ +FC RGKL  A   +  M         +   +LI G  ++ ++  A  + 
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ +G  P+ + Y  ++ G CK G++ +A  L  EM+  G  P+  T+  ++  +   
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHA 508

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A   + + +     P  +TY +LIE  CK+    RA E+LD+M  +G  PD  TY
Sbjct: 509 NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTY 568

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILDIMN 354
             L++  C  G+  +A   +N+L     + N + ++ LLH     G  D A+D   +++ 
Sbjct: 569 RPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLG 628

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                  V  Y++LI G+ +       I+   QM  +  +PD V Y T++ A  K G L 
Sbjct: 629 RGVAMDLV-CYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLK 687

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A  L  ++    C P ++TY  LI+GL K G M+KA +L  +M+ +   P+  T+   +
Sbjct: 688 MAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFL 747

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
                   +E+A+ L  ++   G       Y ++I G CK  ++  A +VL  MI S   
Sbjct: 748 DYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGIS 806

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           PD   +STI+ +    G  +EA KLW+ ++   V
Sbjct: 807 PDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGV 840



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 202/392 (51%)

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V+++M+  G +P   T + ++ GL +  Q R A+ L DE+  SG  PDV  Y  ++R++ 
Sbjct: 167 VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLC 226

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +   F +A          GC   + TY + I  +CK   +  A+E+ + ++ +G   D+ 
Sbjct: 227 ELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVG 286

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +LV   CK  +++    ++N ++  G  P+    + L+  L  +G   +   +++ +
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +   +P++F YN LIN +CK G +D A + FN M  K   P+ VTY+ ++ + CK G L
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + AL  L  +        +  Y++LI G  K G +  A  L+ +M+ NG+ P+ + + +L
Sbjct: 407 DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G+C+  ++  A  L  E+  +G       +  +I GLC + ++  A ++   M+    
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            P++  ++ +++    +G T  A++L  +++E
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE 558



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 109/373 (29%), Positives = 176/373 (47%), Gaps = 1/373 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N +++  C  G    A +L+D M  +  +PD +    LI GL    R+ +A + +
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +       + + ++ ++ G CK G++  A+    EM   G   D++ Y+ ++  +   
Sbjct: 589 NDLQGEQQKLNEMCFSALLHGYCKEGRLDDALDACREMLGRGVAMDLVCYSVLIYGILRQ 648

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              +  I   K    +G  P  + YT +I+   K   +  A  + D M  EGC P++VTY
Sbjct: 649 QDRRSIIDLLKQMHDQGLRPDNVLYTTMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTY 708

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L+N  CK G  D A L+   +L+    PN  TY   L  L S G  +   ++ D++ E
Sbjct: 709 TALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE 768

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              + TV TYNILI G CK G +  A      M+     PD ++Y+T++   C+ G L E
Sbjct: 769 GFLANTV-TYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKE 827

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A++L   +     +P  + YN LI G    G + KA  L   MM  G+ P+  T+ +LI 
Sbjct: 828 AIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIH 887

Query: 476 GFCRADQVEEAVD 488
           G C    V    D
Sbjct: 888 GTCLMSSVSSTAD 900



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 216/454 (47%), Gaps = 1/454 (0%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           FV ++   +N ++     +G +  A  L++ + +    P       LI  + +  ++++A
Sbjct: 316 FVPSEAAVSN-LVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEA 374

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M   G  P+ +TY++++   CKRG++  A+  L +M+  G +  V  Y++++  
Sbjct: 375 ESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISG 434

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               GK + A   + + +  G  P ++ YT LI   CK+  +  A  +  +M  +G SP+
Sbjct: 435 HCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPN 494

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
             T+ +L++  C   +  +A  +   ++   + PN +TYN L+      G      ++LD
Sbjct: 495 TYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLD 554

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M E    P  +TY  LI+GLC  G V  A    N +  +  + + + ++ +L   CKEG
Sbjct: 555 EMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEMCFSALLHGYCKEG 614

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L++AL     + G   +  L+ Y+ LI G+ ++      + L  QM + G+ PD++ + 
Sbjct: 615 RLDDALDACREMLGRGVAMDLVCYSVLIYGILRQQDRRSIIDLLKQMHDQGLRPDNVLYT 674

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           T+I    +A  ++ A  L   +   G       Y  +I+GLCK   +D A  +   M++S
Sbjct: 675 TMIDANAKAGNLKMAFGLWDIMVSEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLAS 734

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              P+   ++  +  +  +G  E+A +L   L+E
Sbjct: 735 NSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLE 768



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 183/388 (47%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T+ +++++    +  +    + ++  M   G  P + T + +L  +    +F+ A+  + 
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           + +  G  P +  YT ++  +C+     RA EV+  M   GC   + TYN  +   CK  
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           +  +AV + N L  +G+  +  TY TL+  L     ++A +++++ M E    P+    +
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L++GL K G +  A +  N++      P +  YN ++ ++CK+G L+EA  L + +   
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P  +TY+ LID   K+G ++ A+   G+M E GI      + +LI G C+  ++  A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             L  E+   G K     Y  +I G CK  ++  A ++   M      P+   F+ ++  
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISG 504

Query: 547 VADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +       EA KL+ +++EW V     T
Sbjct: 505 LCHANRMAEANKLFGEMVEWNVIPNEVT 532


>gi|334183592|ref|NP_001185295.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75179660|sp|Q9LQ15.1|PPR95_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62914, mitochondrial; Flags: Precursor
 gi|8493579|gb|AAF75802.1|AC011000_5 Contains a RepB PF|01051 protein domain and multiple PPR PF|01535
           repeats. EST gb|AA728420 comes from this gene
           [Arabidopsis thaliana]
 gi|332195900|gb|AEE34021.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 528

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 207/374 (55%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G  PD +T N ++ G C   +I  A+AL+D+M   G +PD +T+ T++  +F + K
Sbjct: 139 MMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNK 198

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+      +++GC P L+TY  ++  +CK+     A+ +L+ M       ++V Y++
Sbjct: 199 ASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYST 258

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  CK    DDA+ +   + ++G+ PN ITY++L+  L + G W    ++L  M E  
Sbjct: 259 VIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERK 318

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +P + T++ LI+   K G + +A   + +M+ ++  P+I TY++++   C    L EA 
Sbjct: 319 INPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAK 378

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           Q+L L+    C P ++TYNTLI+G  K   ++K M L+ +M + G+  + +T+ TLI GF
Sbjct: 379 QMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGF 438

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +A   + A  + K++   G       Y +++ GLCK+ K+  A+ V E +  S  +PD 
Sbjct: 439 FQARDCDNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDI 498

Query: 538 TVFSTIVKKVADDG 551
             ++ +++ +   G
Sbjct: 499 YTYNIMIEGMCKAG 512



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 189/369 (51%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N +L  FC   +++DA  L+D M      PD      LI GL   ++  +A  
Sbjct: 145 EPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVA 204

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++  MV  G  PD +TY  +V GLCKRG    A+ LL++M  +  E +V+ Y+T++ ++ 
Sbjct: 205 LIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLC 264

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
                  A+  + +   KG  P +ITY+ LI  +C     + A  +L DM     +P++V
Sbjct: 265 KYRHEDDALNLFTEMENKGVRPNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLV 324

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+++L++   K+GK   A  +   ++ R ++PN  TY++L++            ++L++M
Sbjct: 325 TFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELM 384

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P V TYN LING CK   VD+ +  F +M  +    + VTY T++    +    
Sbjct: 385 IRKDCLPNVVTYNTLINGFCKAKRVDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDC 444

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A  +   +      P ++TYN L+DGL K G + KAMV++  +  + + PD  T+  +
Sbjct: 445 DNAQMVFKQMVSVGVHPNILTYNILLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIM 504

Query: 474 IWGFCRADQ 482
           I G C+A +
Sbjct: 505 IEGMCKAGK 513



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/409 (26%), Positives = 212/409 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + ++  T N ++  FC   +L+ A  L+  M +    PD     +L+ G    +RI  A 
Sbjct: 109 ISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAV 168

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PDT+T+  ++ GL    +   A+AL+D M   GC+PD++TY  ++  +
Sbjct: 169 ALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGL 228

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+              ++ Y+ +I+ +CK      A+ +  +M  +G  P++
Sbjct: 229 CKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNV 288

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TY+SL++  C  G++ DA  ++++++ R + PN +T++ L+ +   +G     +K+ + 
Sbjct: 289 ITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEE 348

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M + S  P +FTY+ LING C    +  A      M+ K+C P++VTYNT++   CK   
Sbjct: 349 MIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKR 408

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +++ ++L   ++        +TY TLI G  +    + A +++ QM+  G+ P+ +T+  
Sbjct: 409 VDKGMELFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSVGVHPNILTYNI 468

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           L+ G C+  ++ +A+ + + + +   +     Y ++I G+CK+ K  M 
Sbjct: 469 LLDGLCKNGKLAKAMVVFEYLQRSTMEPDIYTYNIMIEGMCKAGKWKMG 517



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 182/362 (50%)

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++  AI L   M+ S   P +I ++ +L  +    KF   I F +     G    L TY 
Sbjct: 58  ELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYN 117

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           ILI   C+   ++ A+ +L  M   G  PDIVT NSL+N  C   +  DAV +++ ++  
Sbjct: 118 ILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEM 177

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G +P+++T+ TL+H L           ++D M +    P + TY  ++NGLCK G  D A
Sbjct: 178 GYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLA 237

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +N  N+M +   + ++V Y+TV+ +LCK    ++AL L   +      P +ITY++LI  
Sbjct: 238 LNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISC 297

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L   G    A  L   M+E  I+P+ +T   LI  F +  ++ +A  L +E+ KR     
Sbjct: 298 LCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKLYEEMIKRSIDPN 357

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y  +I+G C   ++  A Q+LELMI     P+   ++T++         ++  +L++
Sbjct: 358 IFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCKAKRVDKGMELFR 417

Query: 562 KL 563
           ++
Sbjct: 418 EM 419



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 97/390 (24%), Positives = 174/390 (44%), Gaps = 70/390 (17%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  +LRT   + +   AIG +    +    P +I ++ L+  + K       I   + M 
Sbjct: 46  YREVLRTGLSDIELDDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKME 105

Query: 285 IEGCSPDIVTYNSLVNFSCK-----------------------------------QGKYD 309
           I G S ++ TYN L+N  C+                                     +  
Sbjct: 106 ILGISHNLYTYNILINCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRIS 165

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLG----------------SRGCW---------- 343
           DAV +++ ++  G +P+++T+ TL+H L                  RGC           
Sbjct: 166 DAVALVDQMVEMGYKPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVV 225

Query: 344 ---------DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                    D    +L+ M  A     V  Y+ +I+ LCKY   D A+N F +M +K  +
Sbjct: 226 NGLCKRGDTDLALNLLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVR 285

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+++TY++++  LC  G  ++A +LL  +     +P L+T++ LID   KKG + KA  L
Sbjct: 286 PNVITYSSLISCLCNYGRWSDASRLLSDMIERKINPNLVTFSALIDAFVKKGKLVKAEKL 345

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y +M++  I P+  T+ +LI GFC  D++ EA  +L+ + ++        Y  +I+G CK
Sbjct: 346 YEEMIKRSIDPNIFTYSSLINGFCMLDRLGEAKQMLELMIRKDCLPNVVTYNTLINGFCK 405

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +K+VD  +++   M       +   ++T++
Sbjct: 406 AKRVDKGMELFREMSQRGLVGNTVTYTTLI 435



 Score =  102 bits (253), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 127/260 (48%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           DDA+ +   +      P+ I ++ LL ++     +D V    + M     S  ++TYNIL
Sbjct: 60  DDAIGLFGVMAQSRPFPSIIEFSKLLSAIAKMNKFDLVISFGEKMEILGISHNLYTYNIL 119

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN  C+   +  A+    +M+    +PDIVT N++L   C    +++A+ L+  +     
Sbjct: 120 INCFCRCSRLSLALALLGKMMKLGYEPDIVTLNSLLNGFCHGNRISDAVALVDQMVEMGY 179

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P  +T+ TLI GL       +A+ L  +M++ G  PD +T+  ++ G C+    + A++
Sbjct: 180 KPDTVTFTTLIHGLFLHNKASEAVALIDRMVQRGCQPDLVTYGAVVNGLCKRGDTDLALN 239

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           LL ++     +     Y  VI  LCK +  D A+ +   M +   +P+   +S+++  + 
Sbjct: 240 LLNKMEAAKIEANVVIYSTVIDSLCKYRHEDDALNLFTEMENKGVRPNVITYSSLISCLC 299

Query: 549 DDGMTEEAYKLWQKLIEWKV 568
           + G   +A +L   +IE K+
Sbjct: 300 NYGRWSDASRLLSDMIERKI 319


>gi|356518209|ref|XP_003527773.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Glycine max]
          Length = 1113

 Score =  211 bits (537), Expect = 8e-52,   Method: Compositional matrix adjust.
 Identities = 131/470 (27%), Positives = 222/470 (47%), Gaps = 39/470 (8%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G + D  + ++ +  R  I  +  CI   R L R  RI+ A  +L+ M   G  PD +TY
Sbjct: 244 GTIMDLLEEMETLGLRPNIYTYTICI---RVLGRAGRIDDAYGILKTMEDEGCGPDVVTY 300

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
            +++  LC  G++  A  L  +M  S  +PD++TY T++    + G  +    FW +   
Sbjct: 301 TVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEA 360

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P ++TYTIL+E +CK   + +A ++LD M + G  P++ TYN+L++      + D+
Sbjct: 361 DGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDE 420

Query: 311 AVLVINNLLSRGMEPNSITY-----------------------------------NTLLH 335
           A+ + NN+ S G+ P + +Y                                   N  L+
Sbjct: 421 ALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLY 480

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           SL   G       I + ++    SP   TYN+++    K G +D+A     +M+S+ C+P
Sbjct: 481 SLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEP 540

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           DI+  N+++  L K G ++EA Q+   L     +P ++TYN LI GL K+G + KA+ L+
Sbjct: 541 DIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLF 600

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
           G M E+G  P+ +T   L+   C+ D V+ A+ +   +           Y  +I+GL K 
Sbjct: 601 GSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKE 660

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +   A      M      PD     T++  V  DG  E+A K+  + + 
Sbjct: 661 GRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVH 709



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 130/484 (26%), Positives = 228/484 (47%), Gaps = 37/484 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C+ GKL  A +L   M   +  PD    I L+        +E   +  
Sbjct: 296 DVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFW 355

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD +TY ++V  LCK G++  A  +LD M V G  P++ TYNT++  + + 
Sbjct: 356 SEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNL 415

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A+  + +    G  P   +Y + I+   K     +A++  + M   G  P I   
Sbjct: 416 RRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAAC 475

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN----------------TLLHSLGS 339
           N+ +    + G+  +A  + N++ + G+ P+S+TYN                 LL  + S
Sbjct: 476 NASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLS 535

Query: 340 RGCWD---AVDKILDIMNEASH----------------SPTVFTYNILINGLCKYGLVDR 380
            GC      V+ ++D + +A                  +PTV TYNILI GL K G + +
Sbjct: 536 EGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLK 595

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A++ F  M    C P+ VT+N +L  LCK   ++ AL++   +   +CSP ++TYNT+I 
Sbjct: 596 ALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIY 655

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE-IGKRGNK 499
           GL K+G    A   Y Q M+  +SPD +T  TL+ G  +  +VE+A+ ++ E + + G +
Sbjct: 656 GLIKEGRAGYAFWFYHQ-MKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQ 714

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             N  +  ++  +    +++ AI   E ++ +    DD +   +++ +       +A KL
Sbjct: 715 TSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKL 774

Query: 560 WQKL 563
           + K 
Sbjct: 775 FDKF 778



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 223/460 (48%), Gaps = 4/460 (0%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARR--NQIPDFHFCINLIRGLIRIDRI 168
           P + +  +T N +L+     G++ D + + D+M ++  N+ P+ +  I   + L     I
Sbjct: 116 PNIVHTPETCNYMLEFLRVHGRVEDMAFVFDLMQKQVINRNPNTYLTI--FKALSIKGGI 173

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A   L  M  +G V +  +YN ++  L + G  + A+ +   M   G +P + TY+ +
Sbjct: 174 RQAPFALGKMRQAGFVLNAYSYNGLIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSAL 233

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +         +   ++    G  P + TYTI I  + +   I  A  +L  M  EGC
Sbjct: 234 MVALGRRRDTGTIMDLLEEMETLGLRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGC 293

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD+VTY  L++  C  GK D A  +   + +   +P+ +TY TL+   G+ G  + V +
Sbjct: 294 GPDVVTYTVLIDALCAAGKLDKAKELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKR 353

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
               M    ++P V TY IL+  LCK G VD+A +  + M  +   P++ TYNT++  L 
Sbjct: 354 FWSEMEADGYAPDVVTYTILVEALCKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLL 413

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
               L+EAL+L + +     +P   +Y   ID   K G  EKA+  + +M + GI P   
Sbjct: 414 NLRRLDEALELFNNMESLGVAPTAYSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIA 473

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
                ++      ++ EA D+  +I   G    +  Y +++    K+ ++D A ++L  M
Sbjct: 474 ACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEM 533

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +S   +PD  V ++++  +   G  +EA++++ +L + K+
Sbjct: 534 LSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKL 573



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 220/479 (45%), Gaps = 70/479 (14%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI  L++    ++A KV + M+  G  P   TY+ ++  L +R    + + LL+EM   G
Sbjct: 198 LIYFLLQPGFCKEALKVYKRMISEGLKPSMKTYSALMVALGRRRDTGTIMDLLEEMETLG 257

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P++ TY   +R +   G+   A G  K    +GC P ++TYT+LI+ +C    + +A 
Sbjct: 258 LRPNIYTYTICIRVLGRAGRIDDAYGILKTMEDEGCGPDVVTYTVLIDALCAAGKLDKAK 317

Query: 278 EVL-----------------------------------DDMAIEGCSPDIVTYNSLVNFS 302
           E+                                     +M  +G +PD+VTY  LV   
Sbjct: 318 ELYTKMRASSHKPDLVTYITLMSKFGNYGDLETVKRFWSEMEADGYAPDVVTYTILVEAL 377

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK GK D A  +++ +  RG+ PN  TYNTL+  L +    D   ++ + M     +PT 
Sbjct: 378 CKSGKVDQAFDMLDVMRVRGIVPNLHTYNTLISGLLNLRRLDEALELFNNMESLGVAPTA 437

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSK------------------------------- 391
           ++Y + I+   K G  ++A+++F +M  +                               
Sbjct: 438 YSYVLFIDYYGKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFND 497

Query: 392 --NC--QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
             NC   PD VTYN ++    K G +++A +LL  +    C P +I  N+LID L K G 
Sbjct: 498 IHNCGLSPDSVTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGR 557

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +++A  ++G++ +  ++P  +T+  LI G  +  ++ +A+DL   + + G       +  
Sbjct: 558 VDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNA 617

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           ++  LCK+  VD+A+++   M      PD   ++TI+  +  +G    A+  + ++ ++
Sbjct: 618 LLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKF 676



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 129/487 (26%), Positives = 222/487 (45%), Gaps = 38/487 (7%)

Query: 114  ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
            E D    N ++      G++ +A ++   +      P       LI GL +  ++ KA  
Sbjct: 539  EPDIIVVNSLIDTLYKAGRVDEAWQMFGRLKDLKLAPTVVTYNILITGLGKEGKLLKALD 598

Query: 174  VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            +   M  SG  P+T+T+N ++  LCK   +  A+ +   M++  C PDV+TYNTI+  + 
Sbjct: 599  LFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRMTIMNCSPDVLTYNTIIYGLI 658

Query: 234  DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI---------------- 277
              G+   A  F+  Q++K   P  +T   L+  V K   +  AI                
Sbjct: 659  KEGRAGYAFWFYH-QMKKFLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSN 717

Query: 278  ----EVLDDMAIEGCSPDIVTY------NS----------LVNFSCKQGKYDDAVLVINN 317
                E+++ + IE    + +++      NS          L+   CKQ K  DA  + + 
Sbjct: 718  QVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDK 777

Query: 318  LL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
               S G  P   +YN L+  L      +A  K+   M  A   P +FTYN+L++   K  
Sbjct: 778  FTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSK 837

Query: 377  LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
             +D     +N+M+ + C+P+I+T+N ++ AL K   +N+AL L + +     SP   TY 
Sbjct: 838  RIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYG 897

Query: 437  TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
             LI GL K G  E+AM ++ +M +    P+   +  LI GF +A  V  A DL K + K 
Sbjct: 898  PLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKE 957

Query: 497  GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
            G +    +Y +++  L  + +VD A+   E +  +   PD   ++ ++  +      EEA
Sbjct: 958  GIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEA 1017

Query: 557  YKLWQKL 563
              L+ ++
Sbjct: 1018 LSLFSEM 1024



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 126/487 (25%), Positives = 215/487 (44%), Gaps = 61/487 (12%)

Query: 131 GKLTDASKLIDI---MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           GKL D  K +D    M +R  +P    C   +  L  + RI +A  +   +   G  PD+
Sbjct: 448 GKLGDPEKALDTFEKMKKRGIMPSIAACNASLYSLAEMGRIREAKDIFNDIHNCGLSPDS 507

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +TYNMM+    K GQI  A  LL EM   GCEPD+I  N+++ T++  G+  +A   +  
Sbjct: 508 VTYNMMMKCYSKAGQIDKATKLLTEMLSEGCEPDIIVVNSLIDTLYKAGRVDEAWQMFGR 567

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
                  P ++TY ILI  + K+  + +A+++   M   GC P+ VT+N+L++  CK   
Sbjct: 568 LKDLKLAPTVVTYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDA 627

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-------CWDAVDKILDIMNEASHSP 360
            D A+ +   +      P+ +TYNT+++ L   G        +  + K L        SP
Sbjct: 628 VDLALKMFCRMTIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMKKFL--------SP 679

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG--------------- 405
              T   L+ G+ K G V+ AI    + V    Q  + T N V G               
Sbjct: 680 DHVTLYTLLPGVVKDGRVEDAIKIVMEFVH---QSGLQTSNQVWGELMECILIEAEIEEA 736

Query: 406 ------------------------ALCKEGMLNEALQLLHLLNGS-SCSPCLITYNTLID 440
                                    LCK+    +A +L      S    P   +YN L+D
Sbjct: 737 ISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMD 796

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL      E A+ L+ +M   G  P+  T+  L+    ++ +++E  +L  E+  RG K 
Sbjct: 797 GLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKP 856

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               + ++I  L KS  ++ A+ +   +IS  + P    +  ++  +   G +EEA K++
Sbjct: 857 NIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIF 916

Query: 561 QKLIEWK 567
           +++ +++
Sbjct: 917 EEMPDYQ 923



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 112/437 (25%), Positives = 202/437 (46%), Gaps = 2/437 (0%)

Query: 112  FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID-RIEK 170
            F+  D  T   +L      G++ DA K++     ++ +   +     +   I I+  IE+
Sbjct: 676  FLSPDHVTLYTLLPGVVKDGRVEDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEE 735

Query: 171  ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTIL 229
            A    + +V +    D      ++  LCK+ +   A  L D+ + S G  P   +YN ++
Sbjct: 736  AISFAEGLVCNSICQDDNLILPLIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLM 795

Query: 230  RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
              +      + A+  + +    GC P + TY +L++   K   I    E+ ++M   GC 
Sbjct: 796  DGLLGCNITEAALKLFVEMKNAGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCK 855

Query: 290  PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            P+I+T+N +++   K    + A+ +   ++S    P   TY  L+  L   G  +   KI
Sbjct: 856  PNIITHNIIISALVKSNSINKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKI 915

Query: 350  LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
             + M +    P    YNILING  K G V+ A + F +M+ +  +PD+ +Y  ++  L  
Sbjct: 916  FEEMPDYQCKPNCAIYNILINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFM 975

Query: 410  EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
             G +++A+     L  +   P  ++YN +I+GL K   +E+A+ L+ +M   GISP+  T
Sbjct: 976  TGRVDDAVHYFEELKLTGLDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYT 1035

Query: 470  HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
            +  LI  F  A  V++A  + +E+   G +     Y  +I G  KS   D A  V + M+
Sbjct: 1036 YNALILHFGNAGMVDQAGKMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMM 1095

Query: 530  SSRYKPDDTVFSTIVKK 546
                 P+   F+ +  K
Sbjct: 1096 IVGCSPNAGTFAQLPNK 1112



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 120/462 (25%), Positives = 217/462 (46%), Gaps = 25/462 (5%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T N I+      G+   A      M ++   PD      L+ G+++  R+E A K++
Sbjct: 646  DVLTYNTIIYGLIKEGRAGYAFWFYHQM-KKFLSPDHVTLYTLLPGVVKDGRVEDAIKIV 704

Query: 176  QIMVMSGGVPDTITYNMMVGGLCK----RGQIRSAIALLDEMSV-SGCEPDVITYNTILR 230
               V   G+    T N + G L +      +I  AI+  + +   S C+ D    N IL 
Sbjct: 705  MEFVHQSGLQ---TSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDD----NLILP 757

Query: 231  TMFDNGKFKQAIGFWK--DQLRK--GCPPYLITYTILIEQVCKQCGIARA-IEVLDDMAI 285
             +    K K+A+   K  D+  K  G  P   +Y  L++ +   C I  A +++  +M  
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLL-GCNITEAALKLFVEMKN 816

Query: 286  EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
             GC P+I TYN L++   K  + D+   + N +L RG +PN IT+N ++ +L      ++
Sbjct: 817  AGCCPNIFTYNLLLDAHGKSKRIDELFELYNEMLCRGCKPNIITHNIIISALVKS---NS 873

Query: 346  VDKILDIMNE---ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            ++K LD+  E      SPT  TY  LI GL K G  + A+  F +M    C+P+   YN 
Sbjct: 874  INKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNI 933

Query: 403  VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
            ++    K G +N A  L   +      P L +Y  L++ L   G ++ A+  + ++   G
Sbjct: 934  LINGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTG 993

Query: 463  ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
            + PD +++  +I G  ++ ++EEA+ L  E+  RG       Y  +I     +  VD A 
Sbjct: 994  LDPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAG 1053

Query: 523  QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++ E +     +P+   ++ +++  +  G  + A+ +++K++
Sbjct: 1054 KMFEELQFMGLEPNVFTYNALIRGHSKSGNKDRAFSVFKKMM 1095



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 117/485 (24%), Positives = 212/485 (43%), Gaps = 44/485 (9%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N ++      GKL  A  L   M      P+      L+  L + D ++ A K+   M
Sbjct: 579  TYNILITGLGKEGKLLKALDLFGSMKESGCPPNTVTFNALLDCLCKNDAVDLALKMFCRM 638

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +    PD +TYN ++ GL K G+   A     +M      PD +T  T+L  +  +G+ 
Sbjct: 639  TIMNCSPDVLTYNTIIYGLIKEGRAGYAFWFYHQMK-KFLSPDHVTLYTLLPGVVKDGRV 697

Query: 239  KQAIGF----------------WKDQLRKGCPPYLITYTI-------------------- 262
            + AI                  W + +        I   I                    
Sbjct: 698  EDAIKIVMEFVHQSGLQTSNQVWGELMECILIEAEIEEAISFAEGLVCNSICQDDNLILP 757

Query: 263  LIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            LI  +CKQ     A ++ D      G  P   +YN L++        + A+ +   + + 
Sbjct: 758  LIRVLCKQKKALDAKKLFDKFTKSLGTHPTPESYNCLMDGLLGCNITEAALKLFVEMKNA 817

Query: 322  GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA---SHSPTVFTYNILINGLCKYGLV 378
            G  PN  TYN LL + G       +D++ ++ NE       P + T+NI+I+ L K   +
Sbjct: 818  GCCPNIFTYNLLLDAHGKS---KRIDELFELYNEMLCRGCKPNIITHNIIISALVKSNSI 874

Query: 379  DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
            ++A++ + +++S +  P   TY  ++G L K G   EA+++   +    C P    YN L
Sbjct: 875  NKALDLYYEIISGDFSPTPCTYGPLIGGLLKAGRSEEAMKIFEEMPDYQCKPNCAIYNIL 934

Query: 439  IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
            I+G  K G +  A  L+ +M++ GI PD  ++  L+       +V++AV   +E+   G 
Sbjct: 935  INGFGKAGNVNIACDLFKRMIKEGIRPDLKSYTILVECLFMTGRVDDAVHYFEELKLTGL 994

Query: 499  KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 +Y L+I+GL KS++++ A+ +   M +    P+   ++ ++    + GM ++A K
Sbjct: 995  DPDTVSYNLMINGLGKSRRLEEALSLFSEMKNRGISPELYTYNALILHFGNAGMVDQAGK 1054

Query: 559  LWQKL 563
            ++++L
Sbjct: 1055 MFEEL 1059


>gi|242086791|ref|XP_002439228.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
 gi|241944513|gb|EES17658.1| hypothetical protein SORBIDRAFT_09g002630 [Sorghum bicolor]
          Length = 653

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 122/433 (28%), Positives = 218/433 (50%), Gaps = 7/433 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKV 174
           D+ T   I+   C+ G++ +A++++      +  P      N +I  L R  R+++   V
Sbjct: 203 DDVTYGTIVSALCTLGRVDEATEVL------SAAPPVAASYNAVILALCREFRMQEVFAV 256

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           +  MV  G  P+ ITY  +V   CK G++R A A+L  M ++GC P+V T+  ++  +F+
Sbjct: 257 VGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFN 316

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +G+   A+  WK  + +G  P  ++Y +LI  +C    +  A  VL+DM   GC P+  T
Sbjct: 317 DGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNART 376

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y++L++   K G  D A+ + N++   G +PN + Y  ++     +  ++  + ++D M 
Sbjct: 377 YSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKML 436

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
             +  P   T+N LI  LC    V RA+  F++M    C P+  TYN +L  L +EG   
Sbjct: 437 VENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCG 496

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +ALQ++  +        L+TYNT++ GL +     +AM   G+M+  GI PD  T   +I
Sbjct: 497 DALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAII 556

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             +C+  +V  A  +L  +           Y +++  LC   K++ A+  L  M+     
Sbjct: 557 HAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIY 616

Query: 535 PDDTVFSTIVKKV 547
           P+   ++ +V+ V
Sbjct: 617 PNTVTWNVLVRGV 629



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 114/377 (30%), Positives = 188/377 (49%), Gaps = 2/377 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I+  FC  G+L  A  ++  M      P+      L+ GL    R+  A  + + M
Sbjct: 271 TYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCM 330

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P T++YN+++ GLC  G ++ A ++L++M   GC P+  TY+T++      G  
Sbjct: 331 VAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDL 390

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI  W D  R GC P ++ YT ++   CK+    +A  ++D M +E C P+ VT+N+L
Sbjct: 391 DGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVENCPPNTVTFNTL 450

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEAS 357
           +   C   +   A+ V + +   G  PN  TYN LLH L   G C DA+  ++++ N   
Sbjct: 451 IRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDALQMVIEMQNHGI 510

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
               V TYN +++GLC+  +   A+    +M+ +  QPD  T+  ++ A CKEG +  A 
Sbjct: 511 ELSLV-TYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHAYCKEGEVRMAA 569

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L  +N  +C   ++ Y  L+  L  +  +E AMV   +M+  GI P+ +T   L+ G 
Sbjct: 570 WILGAMNVVNCGRNILVYTILMAELCNQDKLEDAMVYLLKMLYEGIYPNTVTWNVLVRGV 629

Query: 478 CRADQVEEAVDLLKEIG 494
            R        D ++ I 
Sbjct: 630 FRNLGCNNPSDFIQHIA 646



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 205/425 (48%), Gaps = 30/425 (7%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +LI  L+R + +   + V   M   G  P+  TYN++V  LC+  ++ +A  +LDEM+  
Sbjct: 139 HLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMATK 198

Query: 217 GCEPDVITYNTILRTMFDNGKFKQA------------------------------IGFWK 246
           GC PD +TY TI+  +   G+  +A                                   
Sbjct: 199 GCPPDDVTYGTIVSALCTLGRVDEATEVLSAAPPVAASYNAVILALCREFRMQEVFAVVG 258

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           D + +G  P +ITYT ++   CK   +  A  +L  M I GC+P++ T+ +LV      G
Sbjct: 259 DMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALVGGLFNDG 318

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           +  DA+ +   +++ G  P++++YN L+  L S G       +L+ M +    P   TY+
Sbjct: 319 RVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCFPNARTYS 378

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI+G  K G +D AI+ +N M    C+P++V Y  ++G  CK+ M N+A  L+  +   
Sbjct: 379 TLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESLIDKMLVE 438

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           +C P  +T+NTLI  L     + +A+ ++ +M  +G  P+  T+  L+ G  R     +A
Sbjct: 439 NCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFREGNCGDA 498

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + ++ E+   G ++    Y  V+ GLC+ +    A+  +  MI    +PD   F+ I+  
Sbjct: 499 LQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGRMIVRGIQPDAFTFTAIIHA 558

Query: 547 VADDG 551
              +G
Sbjct: 559 YCKEG 563



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 175/370 (47%), Gaps = 5/370 (1%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           YN ++  L +   + +   +   M   G +P+V TYN ++R +  N +   A     +  
Sbjct: 137 YNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRALCQNHRVGAARKMLDEMA 196

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            KGCPP  +TY  ++  +C    +  A EVL         P   +YN+++   C++ +  
Sbjct: 197 TKGCPPDDVTYGTIVSALCTLGRVDEATEVL-----SAAPPVAASYNAVILALCREFRMQ 251

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +   V+ +++ RG++PN ITY T++++    G       IL  M     +P V T+  L+
Sbjct: 252 EVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILARMVITGCTPNVATFTALV 311

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
            GL   G V  A++ +  MV++   P  V+YN ++  LC  G L  A  +L+ +    C 
Sbjct: 312 GGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVGDLKGASSVLNDMEQHGCF 371

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P   TY+TLIDG +K G ++ A+ ++  M  +G  P+ + +  ++  FC+     +A  L
Sbjct: 372 PNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYTNMVGVFCKKLMFNQAESL 431

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           + ++           +  +I  LC  ++V  A+ V   M      P+   ++ ++  +  
Sbjct: 432 IDKMLVENCPPNTVTFNTLIRSLCNCRRVGRALGVFHEMRRHGCPPNGRTYNELLHGLFR 491

Query: 550 DGMTEEAYKL 559
           +G   +A ++
Sbjct: 492 EGNCGDALQM 501



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/323 (25%), Positives = 156/323 (48%), Gaps = 7/323 (2%)

Query: 244 FWKDQLRKGC--PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           F++     GC  P     Y  LI+ + ++  +     V  +M  +G  P++ TYN LV  
Sbjct: 119 FYRAVHDLGCARPTAPRLYNHLIDALLRENMVGAVALVCGNMRKDGVQPNVFTYNLLVRA 178

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+  +   A  +++ + ++G  P+ +TY T++ +L + G    VD+  ++++ A   P 
Sbjct: 179 LCQNHRVGAARKMLDEMATKGCPPDDVTYGTIVSALCTLG---RVDEATEVLSAAP--PV 233

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             +YN +I  LC+   +         MV +  QP+++TY T++ A CK G L  A  +L 
Sbjct: 234 AASYNAVILALCREFRMQEVFAVVGDMVGRGLQPNVITYTTIVNAFCKAGELRMACAILA 293

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +  + C+P + T+  L+ GL   G +  A+ ++  M+  G +P  +++  LI G C   
Sbjct: 294 RMVITGCTPNVATFTALVGGLFNDGRVHDALDMWKCMVAEGWAPSTVSYNVLIRGLCSVG 353

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            ++ A  +L ++ + G       Y  +I G  K+  +D AI +   M  S  KP+  V++
Sbjct: 354 DLKGASSVLNDMEQHGCFPNARTYSTLIDGFSKAGDLDGAISIWNDMTRSGCKPNVVVYT 413

Query: 542 TIVKKVADDGMTEEAYKLWQKLI 564
            +V       M  +A  L  K++
Sbjct: 414 NMVGVFCKKLMFNQAESLIDKML 436



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 35/169 (20%), Positives = 77/169 (45%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T N++L      G   DA +++  M              ++ GL ++    +A   +  
Sbjct: 480 RTYNELLHGLFREGNCGDALQMVIEMQNHGIELSLVTYNTVVSGLCQMRMGREAMFFVGR 539

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M++ G  PD  T+  ++   CK G++R A  +L  M+V  C  +++ Y  ++  + +  K
Sbjct: 540 MIVRGIQPDAFTFTAIIHAYCKEGEVRMAAWILGAMNVVNCGRNILVYTILMAELCNQDK 599

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            + A+ +    L +G  P  +T+ +L+  V +  G     + +  +A++
Sbjct: 600 LEDAMVYLLKMLYEGIYPNTVTWNVLVRGVFRNLGCNNPSDFIQHIAMD 648


>gi|147833287|emb|CAN77475.1| hypothetical protein VITISV_041111 [Vitis vinifera]
          Length = 1010

 Score =  211 bits (537), Expect = 9e-52,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 226/452 (50%), Gaps = 23/452 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++ +FC  G L  A K  D M R    P+      LI   ++  ++  A+++ 
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF 573

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M+  G +P+ +TY  ++ G CK GQI  A  +   M  +   PDV  Y  I     D+
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI-----DD 628

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  +               P + TY  L++ +CK   +  A ++LD M++EGC P+ + Y
Sbjct: 629 GNIRD--------------PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  CK GK D+A +V   +  RG  PN  TY++L+  L      D   K+L  M E
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            S +P V  Y  +I+GLCK G  D A    + M  K C P++VTY  ++    K G +++
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            L+L+  +    C+P  +TY  LI+     G ++ A  L  +M +         +R +I 
Sbjct: 795 CLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE 854

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS--SRY 533
           GF R   +  ++ LL EI +        AYR++I   CK+ ++++A+++ + M S  S  
Sbjct: 855 GFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYS 912

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             D  ++S++++ ++     ++A++L+  +I+
Sbjct: 913 AADKDLYSSLIESLSLASKVDKAFELYADMIK 944



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 154/591 (26%), Positives = 256/591 (43%), Gaps = 54/591 (9%)

Query: 22  WCSRQVSLQH------------GVVNNHRT--QFYSQLRD-----LGAGRNVSLK--CRG 60
           W  RQ+   H            G   N R   QF  ++RD     LG   NV ++  CR 
Sbjct: 151 WAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRN 210

Query: 61  LPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSL---PSSDGPFVENDE 117
              NV ++ +  +   +   +   L  N  +R      +     L     SD  F   D 
Sbjct: 211 GLWNVALEELGRLK--DLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF-NMDG 267

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
            T    +   C  G+  +A  LI+   +     D      +I GL      E+A   L  
Sbjct: 268 YTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSR 324

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  S  +P+ +TY +++ G  ++ Q+     +L  M   GC P    +N+++     +G 
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD-------DMAIEGCSP 290
           +  A    K     GC P  + Y ILI  +C    +  +++VL+       +M       
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAHVVL 443

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           + V  ++L    C  GK++ A  +I  ++S+G  P++ TY+ ++  L +    D    + 
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           + M      P VFTY ILI+  CK GL+ +A   F++MV   C P++VTY  ++ A  K 
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD--- 467
             ++ A +L  ++    C P ++TY  LIDG  K G +EKA  +Y +M  N   PD    
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 468 -------------ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
                         T+  L+ G C+A +V+EA DLL  +   G +  +  Y  +I G CK
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             K+D A  V   M    Y P+   +S+++ ++  D   + A K+  +++E
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 114/420 (27%), Positives = 193/420 (45%), Gaps = 61/420 (14%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +    K++ A++L ++M     IP+      LI G  +  +IEKA ++   M
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 179 VMSGGVPDT----------------ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
             +  +PD                  TY  +V GLCK  +++ A  LLD MSV GCEP+ 
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           I Y+ ++      GK  +A   +     +G  P + TY+ LI+++ K   +  A++VL  
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M    C+P+++ Y  +++  CK GK D+A  +++ +  +G  PN +TY  ++   G  G 
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG- 790

Query: 343 WDAVDKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRA------------------ 381
              VDK L++M +      +P   TY +LIN  C  GL+D A                  
Sbjct: 791 --KVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAG 848

Query: 382 ----INSFNQM----------VSKNCQ-PDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
               I  FN+           +++N   P I  Y  ++ + CK G L  AL+L   +  S
Sbjct: 849 YRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXM--S 906

Query: 427 SCSPCLIT----YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           SC+         Y++LI+ L+    ++KA  LY  M++ G  P+      L+ G  R ++
Sbjct: 907 SCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 82/338 (24%), Positives = 153/338 (45%), Gaps = 4/338 (1%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG   + +  T   ++   C   K+ +A  L+D+M+     P+      LI G  ++ ++
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           ++A  V   M   G  P+  TY+ ++  L K  ++  A+ +L  M  + C P+VI Y  +
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM 747

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +   GK  +A         KGC P ++TYT +I+   K   + + +E++  M  +GC
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P+ VTY  L+N  C  G  DDA  +++ +       +   Y  ++        +     
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE--FIISLG 865

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS--KNCQPDIVTYNTVLGA 406
           +LD + E    P +  Y ILI+  CK G ++ A+     M S       D   Y++++ +
Sbjct: 866 LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKXMSSCTSYSAADKDLYSSLIES 925

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           L     +++A +L   +      P L  +  L+ GL +
Sbjct: 926 LSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIR 963


>gi|125596712|gb|EAZ36492.1| hypothetical protein OsJ_20823 [Oryza sativa Japonica Group]
          Length = 604

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 230/433 (53%), Gaps = 14/433 (3%)

Query: 154 FCIN-LIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLD 211
           F  N ++  L R+  +   +++  +M     V PD +TY ++V GLCK G++  A+ +LD
Sbjct: 137 FAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLD 196

Query: 212 EMSVSGCE--PDVITYNTILRTMFDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQV 267
            MS    +  PDV+T NT++  +  +G+ ++A+ F + ++    GCPP  +TY  LI+  
Sbjct: 197 GMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAF 256

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP-- 325
           C+   I+ A E+++ M  EG   +IVT N++V   C+ G+   A+        R + P  
Sbjct: 257 CRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEG 314

Query: 326 --NSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             N++TY+TL+ +L  +     A++   + M+E  HSP    Y  +I+GL + G ++ A 
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEG-HSPDAIMYFTMISGLTQAGRLEDAC 373

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           +  + M     + D   YN ++   C++  L+EA +LL  +      P + TYNTL+ G 
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K G       L G+M+++G  P  IT  TL+ G+C+  +++EA+ +L+ + + G    N
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +I  LCK   VD+AI++ + M       + T F+ ++K + D  M E+A++L  +
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 563 LIEWKVFEKGTTL 575
           + E + F    T+
Sbjct: 554 MREERCFPDYVTV 566



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 188/402 (46%), Gaps = 48/402 (11%)

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWK-DQLRKGCP---PYLITYTILIEQVCKQCGIARA 276
           DV  +N+IL  +    + +   G  +   L +GC    P ++TY IL+  +CK   +  A
Sbjct: 135 DVFAFNSILAAL---ARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDA 191

Query: 277 IEVLDDMAIEGCS--PDIVTYNSLVNFSCKQGKYDDAVLVINNLLS--RGMEPNSITYNT 332
           + VLD M+ +     PD+VT N++V+  CK G+  +A+  +   +S   G  PN++TYN 
Sbjct: 192 LRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNC 251

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ--MVS 390
           L+ +    G      ++++ M        + T N ++ GLC+ G    A+  F +   V 
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVW 311

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
              + + VTY+T++GAL     +  A++L H       SP  I Y T+I GL + G +E 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL---KEIGKRGN--------- 498
           A  +   M E G   D   +  LI GFCR  ++ EA +LL   KE+G R +         
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 499 ----------------KMRNSA-------YRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
                           KM +         +  ++HG CK  K+D A+++L  M  S   P
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHP 491

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           ++ +++T++  +   G  + A +L+ ++ E  V    TT  A
Sbjct: 492 NNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 101/357 (28%), Positives = 170/357 (47%), Gaps = 5/357 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVL-- 175
           T N ++  FC  G ++ A +L++ M     +P     +N ++ GL R  R   A +    
Sbjct: 248 TYNCLIDAFCRVGNISMAYELVEKMENEG-VPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  V   G  + +TY+ +VG L     +  A+ L  E    G  PD I Y T++  +   
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ + A          G       Y ILI   C++  +  A E+L +M   G  PD+ TY
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++ SCK G +     ++  ++  G +P+ IT+ TL+H     G  D   +IL  M+E
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P    YN LI+ LCK G VD AI  F++M  K+   ++ T+N +L  L  + M  +
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           A +L+  +    C P  +T + L++ L   G  ++ +  + Q  E+  S   ++ RT
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR-LKRFMQQGEHTASKRIVSDRT 602



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D K  N ++  FC + +L +A +L+  M      PD      L+ G  +        ++L
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P  IT+  +V G CK G+I  A+ +L  M  SG  P+ + YNT++  +   
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    AI  + +   K  P  + T+  L++ +  +    +A E++D M  E C PD VT 
Sbjct: 507 GDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTV 566

Query: 296 NSLVNFSCKQGKYD 309
           + L+ +    G+ D
Sbjct: 567 DVLMEWLPVIGETD 580


>gi|357154512|ref|XP_003576808.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Brachypodium distachyon]
          Length = 801

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 134/451 (29%), Positives = 224/451 (49%), Gaps = 16/451 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C RG   DA K+ D M  R  +PD      L+  L    RIE A ++L  M  +G
Sbjct: 220 LMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENG 279

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TY + + GLCK G++  A    + +   G    +I Y+ ++  +F  G+F + +
Sbjct: 280 CPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGL 339

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            ++ + L K   P +  YTILI +  +      A  +LD+M  +G  PD   YN+L+   
Sbjct: 340 SYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKAL 399

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
              G  D A  +++ +L   +  +S T+N ++  L  +G  D   ++ D M E    PTV
Sbjct: 400 FDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTV 459

Query: 363 FTYNILINGLCKYGLVDRAINSFNQM-------------VSKNCQPDIVTYNTVLGALCK 409
            TYN LI+GL + G+++ A   F++M             +  N   D  +   ++  +C+
Sbjct: 460 MTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDTESLRKLVDGMCQ 519

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G + +A +LL  +  S   P ++TYNTLI+GL K   ++ A+ L+ ++   GISPD+IT
Sbjct: 520 SGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEIT 579

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + TLI G  RA +  +A  L + I + G       Y  ++  LC+ KK+  AI +    +
Sbjct: 580 YGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLWLDYL 639

Query: 530 SSRY--KPDDTVFSTIVKKVADDGMTEEAYK 558
             +Y   P+D V +   +K  +DG  +E  K
Sbjct: 640 PKKYNLSPEDEVIAN-ARKCFEDGFLDETVK 669



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 130/457 (28%), Positives = 222/457 (48%), Gaps = 21/457 (4%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N + Q    RG +  A  L + M     +P+    I L+ GL +      A K+   M+ 
Sbjct: 183 NAVFQVLVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLE 242

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G VPD   Y +++  LC  G+I  A  LL  M  +GC PD +TY   L  +   G+  +
Sbjct: 243 RGIVPDVKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDE 302

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   ++     G    LI Y+ LI+ + +       +    +M  +  SPDI  Y  L+ 
Sbjct: 303 AFHRFELLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIR 362

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              + G+  DA L+++ +  +G  P++  YNTLL +L   G    +D+   +M+E   + 
Sbjct: 363 RFAEAGRTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVG---NIDRAQSLMSEMLQNN 419

Query: 361 TVF---TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            V    T+NI+I GLCK GL+D+A+  F++M    C P ++TYN ++  L + GML EA 
Sbjct: 420 VVLDSTTHNIMICGLCKKGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEAR 479

Query: 418 QLLHLLNGSSCSPCLI--------------TYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
            L H +   + +P L               +   L+DG+ + G + KA  L   ++E+G+
Sbjct: 480 MLFHKMEMGN-NPSLFLRLTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGV 538

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD +T+ TLI G C+A  ++ A+ L KE+  +G       Y  +I GL ++ + + A  
Sbjct: 539 VPDVVTYNTLINGLCKAKNLDGALRLFKELQLKGISPDEITYGTLIDGLWRAHRENDATM 598

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           + + ++ S   P   +++T+++ +       +A  LW
Sbjct: 599 LFQNILRSGGFPSLPIYNTMMRSLCRMKKLSQAINLW 635



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/402 (23%), Positives = 181/402 (45%), Gaps = 14/402 (3%)

Query: 181 SGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           + G+P  +  +  +V      G+ + A+     M    C P    YN + + + D G   
Sbjct: 137 AAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQVLVDRGVIL 196

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            A+  +   +  GC P   TY +L++ +CK+     A+++ D+M   G  PD+  Y  L+
Sbjct: 197 LALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPDVKIYTVLL 256

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  C +G+ +DA  ++ ++   G  P+ +TY   L  L   G  D      +++ +   +
Sbjct: 257 SSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFELLQDGGFT 316

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             +  Y+ LI+GL + G  D  ++ + +M+ K+  PDI  Y  ++    + G   +A  L
Sbjct: 317 LGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAGRTKDAFLL 376

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +      P    YNTL+  L   G +++A  L  +M++N +  D  TH  +I G C+
Sbjct: 377 LDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTTHNIMICGLCK 436

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV-------------LE 526
              +++A+ +  E+G+ G       Y  +I GL ++  ++ A  +             L 
Sbjct: 437 KGLIDKAMQVFDEMGEHGCHPTVMTYNALIDGLYRAGMLEEARMLFHKMEMGNNPSLFLR 496

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           L + +    D      +V  +   G   +AYKL + +IE  V
Sbjct: 497 LTLGANQVRDTESLRKLVDGMCQSGQVLKAYKLLRGIIESGV 538



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 71/298 (23%), Positives = 136/298 (45%)

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            + L D    G       + +LV      G++ +AV   + +      P +  YN +   
Sbjct: 129 FDALADARAAGLPAPSAAFRALVLAHSSAGRHQEAVEAFSRMGDFDCRPTAFVYNAVFQV 188

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L  RG       + + M  +   P   TY +L++GLCK G+   A+  F++M+ +   PD
Sbjct: 189 LVDRGVILLALALYNRMVSSGCLPNSTTYIVLMDGLCKRGMAVDALKMFDEMLERGIVPD 248

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +  Y  +L +LC EG + +A +LL  +  + C P  +TY   + GL K G +++A   + 
Sbjct: 249 VKIYTVLLSSLCNEGRIEDAGRLLCSMKENGCPPDEVTYTVFLSGLCKAGRVDEAFHRFE 308

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            + + G +   I +  LI G  +A + +E +    E+  +      + Y ++I    ++ 
Sbjct: 309 LLQDGGFTLGLIGYSCLIDGLFQAGRFDEGLSYYTEMLGKSISPDITLYTILIRRFAEAG 368

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +   A  +L+ M    + PD   ++T++K + D G  + A  L  ++++  V    TT
Sbjct: 369 RTKDAFLLLDEMKDKGFVPDTFCYNTLLKALFDVGNIDRAQSLMSEMLQNNVVLDSTT 426



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 64/251 (25%), Positives = 109/251 (43%), Gaps = 28/251 (11%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D ++  K++   C  G++  A KL+  +     +PD      LI GL +   ++ A ++ 
Sbjct: 506 DTESLRKLVDGMCQSGQVLKAYKLLRGIIESGVVPDVVTYNTLINGLCKAKNLDGALRLF 565

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + + + G  PD ITY  ++ GL +  +   A  L   +  SG  P +  YNT++R++   
Sbjct: 566 KELQLKGISPDEITYGTLIDGLWRAHRENDATMLFQNILRSGGFPSLPIYNTMMRSLCRM 625

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV-- 293
            K  QAI  W D L K        Y +  E       IA A +  +D  ++    +++  
Sbjct: 626 KKLSQAINLWLDYLPK-------KYNLSPEDEV----IANARKCFEDGFLDETVKELIKI 674

Query: 294 --TYNSL--------VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              Y SL        V   C+  K DDA+ + + L   G+         L++ L    CW
Sbjct: 675 DQVYGSLNPNPYTIWVIGLCQVRKIDDALRIFHILEEFGIVVTPACCALLINYL----CW 730

Query: 344 DA-VDKILDIM 353
           D  ++  +DIM
Sbjct: 731 DRNLNAAVDIM 741


>gi|52076779|dbj|BAD45723.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
          Length = 629

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 230/433 (53%), Gaps = 14/433 (3%)

Query: 154 FCIN-LIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLD 211
           F  N ++  L R+  +   +++  +M     V PD +TY ++V GLCK G++  A+ +LD
Sbjct: 137 FAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLD 196

Query: 212 EMSVSGCE--PDVITYNTILRTMFDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQV 267
            MS    +  PDV+T NT++  +  +G+ ++A+ F + ++    GCPP  +TY  LI+  
Sbjct: 197 GMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAF 256

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP-- 325
           C+   I+ A E+++ M  EG   +IVT N++V   C+ G+   A+        R + P  
Sbjct: 257 CRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEG 314

Query: 326 --NSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             N++TY+TL+ +L  +     A++   + M+E  HSP    Y  +I+GL + G ++ A 
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEG-HSPDAIMYFTMISGLTQAGRLEDAC 373

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           +  + M     + D   YN ++   C++  L+EA +LL  +      P + TYNTL+ G 
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K G       L G+M+++G  P  IT  TL+ G+C+  +++EA+ +L+ + + G    N
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +I  LCK   VD+AI++ + M       + T F+ ++K + D  M E+A++L  +
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 563 LIEWKVFEKGTTL 575
           + E + F    T+
Sbjct: 554 MREERCFPDYVTV 566



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 188/402 (46%), Gaps = 48/402 (11%)

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWK-DQLRKGCP---PYLITYTILIEQVCKQCGIARA 276
           DV  +N+IL  +    + +   G  +   L +GC    P ++TY IL+  +CK   +  A
Sbjct: 135 DVFAFNSILAAL---ARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDA 191

Query: 277 IEVLDDMAIEGCS--PDIVTYNSLVNFSCKQGKYDDAVLVINNLLS--RGMEPNSITYNT 332
           + VLD M+ +     PD+VT N++V+  CK G+  +A+  +   +S   G  PN++TYN 
Sbjct: 192 LRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNC 251

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ--MVS 390
           L+ +    G      ++++ M        + T N ++ GLC+ G    A+  F +   V 
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVW 311

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
              + + VTY+T++GAL     +  A++L H       SP  I Y T+I GL + G +E 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL---KEIGKRGN--------- 498
           A  +   M E G   D   +  LI GFCR  ++ EA +LL   KE+G R +         
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 499 ----------------KMRNSA-------YRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
                           KM +         +  ++HG CK  K+D A+++L  M  S   P
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHP 491

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           ++ +++T++  +   G  + A +L+ ++ E  V    TT  A
Sbjct: 492 NNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 177/376 (47%), Gaps = 6/376 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVL-- 175
           T N ++  FC  G ++ A +L++ M     +P     +N ++ GL R  R   A +    
Sbjct: 248 TYNCLIDAFCRVGNISMAYELVEKMENEG-VPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  V   G  + +TY+ +VG L     +  A+ L  E    G  PD I Y T++  +   
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ + A          G       Y ILI   C++  +  A E+L +M   G  PD+ TY
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++ SCK G +     ++  ++  G +P+ IT+ TL+H     G  D   +IL  M+E
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P    YN LI+ LCK G VD AI  F++M  K+   ++ T+N +L  L  + M  +
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L+  +    C P  +T + L++ L   G  ++ +  + Q  E+  S   ++ RT  +
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLMEWLPVIGETDR-LKRFMQQGEHTASKRIVSDRTSAY 605

Query: 476 GFCRADQVEEAVDLLK 491
            F  A  + E   L K
Sbjct: 606 -FHFATGLAETFTLHK 620



 Score = 85.5 bits (210), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 54/194 (27%), Positives = 91/194 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D K  N ++  FC + +L +A +L+  M      PD      L+ G  +        ++L
Sbjct: 387 DTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELL 446

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P  IT+  +V G CK G+I  A+ +L  M  SG  P+ + YNT++  +   
Sbjct: 447 GKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKR 506

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    AI  + +   K  P  + T+  L++ +  +    +A E++D M  E C PD VT 
Sbjct: 507 GDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTV 566

Query: 296 NSLVNFSCKQGKYD 309
           + L+ +    G+ D
Sbjct: 567 DVLMEWLPVIGETD 580


>gi|357142282|ref|XP_003572519.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Brachypodium distachyon]
          Length = 706

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 232/448 (51%), Gaps = 12/448 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C  G+L DA  L+  M      P+ +    L++GL    +   A +++
Sbjct: 157 DVVTYNTLIAGYCRGGRLEDARLLVASMP---PAPNSYAYNTLLKGLCSAKQWGDAEELV 213

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +   PD +T+ M++   C+ G +  A+ +LD MS  GC P  I YN I+    + 
Sbjct: 214 EEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFAEL 273

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K+A+  +       C P + +Y  +++ +C+      A E++ +M  + CSPD VT+
Sbjct: 274 GRVKEALHLFSCM---PCKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEVTF 330

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++F C +G  D A+ V++ +   G +P++ TY+ L+++   +GC   V+  L+++  
Sbjct: 331 NTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGC---VEDALELLRS 387

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SP    Y  ++ GLC+ G  +       +MV  +C PD + +  ++  LC+ G+++ 
Sbjct: 388 MPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLVDC 447

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            L++L  +    CSP ++ Y +L++G A+ G ++ ++ L+  M      P+ +T+  ++ 
Sbjct: 448 GLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSMT---CKPNTVTYNYVLM 504

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+ +  E+A  L+ E+  +        + ++I  LC+   V+ AI V E M      P
Sbjct: 505 GLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGCTP 564

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +  ++ST+   +++ G  + A KL   +
Sbjct: 565 NVIIYSTLNNGLSEKGCVDNALKLLNNM 592



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 113/443 (25%), Positives = 230/443 (51%), Gaps = 12/443 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N+I+  F   G++ +A  L   M  +   PD      +++GL R +R E A +++  MV 
Sbjct: 264 NEIISCFAELGRVKEALHLFSCMPCK---PDIFSYNAVLKGLCRAERWEDAGELITEMVR 320

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PD +T+N ++  LC +G +  A+ ++D+M   G +PD  TY+ ++    + G  + 
Sbjct: 321 KDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVED 380

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +      C P  + Y  +++ +C+        +++ +M    C+PD + +  +++
Sbjct: 381 ALELLRSM---PCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIID 437

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C++G  D  + V+  + + G  P+ + Y +LL+     G    VD  L +    +  P
Sbjct: 438 CLCQRGLVDCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYG---RVDDSLKLFKSMTCKP 494

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN ++ GLCK  L + A    ++MV + C P+ +T++ ++ +LC++G++  A+ + 
Sbjct: 495 NTVTYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVF 554

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C+P +I Y+TL +GL++KGC++ A+ L   M       D I + + + G CRA
Sbjct: 555 EKMQMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNM---SCKADTICYSSALKGLCRA 611

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           +  E+A +L+ E+ ++        + ++I  LC+   V+ A +V +LM+     P+  ++
Sbjct: 612 ELWEDAGELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIY 671

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           S+++   ++ G  E+A KL + +
Sbjct: 672 SSLINGFSEHGHLEDALKLLRSM 694



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 137/524 (26%), Positives = 245/524 (46%), Gaps = 48/524 (9%)

Query: 79  SSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           S  + V+  N  + G     +  D  L  +  P   N     N +L+  CS  +  DA +
Sbjct: 153 SGAADVVTYNTLIAGYCRGGRLEDARLLVASMPPAPN-SYAYNTLLKGLCSAKQWGDAEE 211

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L++ M R +  PD      LI    +   +++A  +L  M   G  P  I YN ++    
Sbjct: 212 LVEEMTRNDSPPDDLTFGMLIHSFCQSGLVDRAMGILDRMSKCGCTPGAIVYNEIISCFA 271

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           + G+++ A+ L   M    C+PD+ +YN +L+ +    +++ A     + +RK C P  +
Sbjct: 272 ELGRVKEALHLFSCMP---CKPDIFSYNAVLKGLCRAERWEDAGELITEMVRKDCSPDEV 328

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T+  +I  +C +  +  A+EV+D M   G  PD  TY++L+N   +QG  +DA+ +   L
Sbjct: 329 TFNTVISFLCHKGLVDCALEVVDQMPKYGRKPDNFTYSALINAFSEQGCVEDALEL---L 385

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKI----------------------------- 349
            S    PN++ Y ++L  L   G W+ V ++                             
Sbjct: 386 RSMPCSPNTVCYKSVLKGLCRDGQWEDVGQLIGEMVRNDCAPDEMVFGLIIDCLCQRGLV 445

Query: 350 ---LDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
              L+++ E  +   SP V  Y  L+NG  +YG VD ++  F  M    C+P+ VTYN V
Sbjct: 446 DCGLEVLQEVPNYGCSPDVVMYTSLLNGFAEYGRVDDSLKLFKSM---TCKPNTVTYNYV 502

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           L  LCK  +  +A +L+  + G  C P  +T++ LI  L +KG +E A+ ++ +M   G 
Sbjct: 503 LMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKMQMYGC 562

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           +P+ I + TL  G      V+ A+ LL  +  + + +    Y   + GLC+++  + A +
Sbjct: 563 TPNVIIYSTLNNGLSEKGCVDNALKLLNNMSCKADTI---CYSSALKGLCRAELWEDAGE 619

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           ++  M      PD+  FS I+  +   G  E A ++   +++++
Sbjct: 620 LIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYE 663



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 100/366 (27%), Positives = 182/366 (49%), Gaps = 17/366 (4%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           + G + +A+ L+  MS     P V+    +++ +   G+   A G     LR       +
Sbjct: 73  RLGDLDAALQLVGSMSEP---PAVVPCTLLIKKLCAAGRLADAEGV----LRASEAADAV 125

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
            +  L+   C+   +A A  +L  +A  G + D+VTYN+L+   C+ G+ +DA L++ ++
Sbjct: 126 DHNTLVAGYCRAGRLADAERMLRSLAASG-AADVVTYNTLIAGYCRGGRLEDARLLVASM 184

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
                 PNS  YNTLL  L S   W   +++++ M      P   T+ +LI+  C+ GLV
Sbjct: 185 PP---APNSYAYNTLLKGLCSAKQWGDAEELVEEMTRNDSPPDDLTFGMLIHSFCQSGLV 241

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           DRA+   ++M    C P  + YN ++    + G + EA   LHL +   C P + +YN +
Sbjct: 242 DRAMGILDRMSKCGCTPGAIVYNEIISCFAELGRVKEA---LHLFSCMPCKPDIFSYNAV 298

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           + GL +    E A  L  +M+    SPD++T  T+I   C    V+ A++++ ++ K G 
Sbjct: 299 LKGLCRAERWEDAGELITEMVRKDCSPDEVTFNTVISFLCHKGLVDCALEVVDQMPKYGR 358

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           K  N  Y  +I+   +   V+ A+++L  M  S   P+   + +++K +  DG  E+  +
Sbjct: 359 KPDNFTYSALINAFSEQGCVEDALELLRSMPCS---PNTVCYKSVLKGLCRDGQWEDVGQ 415

Query: 559 LWQKLI 564
           L  +++
Sbjct: 416 LIGEMV 421



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 51/205 (24%), Positives = 81/205 (39%), Gaps = 35/205 (17%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   C      DA KLID M  +   P+      LI  L +   +E A  V + M
Sbjct: 498 TYNYVLMGLCKVELWEDAGKLIDEMVGQECPPNEMTFSILISSLCQKGLVECAIDVFEKM 557

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG--------------------- 217
            M G  P+ I Y+ +  GL ++G + +A+ LL+ MS                        
Sbjct: 558 QMYGCTPNVIIYSTLNNGLSEKGCVDNALKLLNNMSCKADTICYSSALKGLCRAELWEDA 617

Query: 218 -----------CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
                      C PD +T++ I+  +   G  + A       L+  C P ++ Y+ LI  
Sbjct: 618 GELIVEMFRKDCPPDEVTFSIIITNLCQQGFVEYATEVSDLMLKYECTPNIVIYSSLING 677

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPD 291
             +   +  A+++L  M    C PD
Sbjct: 678 FSEHGHLEDALKLLRSMP---CEPD 699


>gi|356566887|ref|XP_003551657.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Glycine max]
          Length = 525

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/420 (30%), Positives = 215/420 (51%), Gaps = 1/420 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G++  A  ++  + +R    D      L++GL    R  +A  +    V  G   D + Y
Sbjct: 105 GQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCY 164

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
             ++ GLCK G+ R AI LL +M   G  P++I YN ++  +   G   +A G   + + 
Sbjct: 165 GTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVG 224

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-EGCSPDIVTYNSLVNFSCKQGKYD 309
           KG    + TY  LI   C       A+ +L++M + E   PD+ T+N LV+  CK G   
Sbjct: 225 KGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVA 284

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A  V   ++ RG+EP+ ++ N L++    RGC     ++ D M E    P V +Y+ LI
Sbjct: 285 EARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLI 344

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           NG CK  +VD A+    +M  +N  PD VTYN +L  L K G +     L+  +  S  +
Sbjct: 345 NGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQA 404

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P LITYN L+D   K+ C++KA+ L+  +++ GISP+  T+  LI G C+  +++ A ++
Sbjct: 405 PDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEI 464

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            + +  +G +     Y ++I+GL +   +D A  +L  M+   + P+   F  +V+ + +
Sbjct: 465 FQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLE 524



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 106/395 (26%), Positives = 201/395 (50%), Gaps = 1/395 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
            I  L  + ++  A  V+  +V  G   D  T   ++ GLC +G+   A+ L D     G
Sbjct: 97  FINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKG 156

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              D + Y T++  +   GK + AI   +   + G  P LI Y ++++ +CK+  +  A 
Sbjct: 157 FSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEAC 216

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL-LSRGMEPNSITYNTLLHS 336
            +  +M  +G   D+ TYNSL++  C  G++  AV ++N + +   + P+  T+N L+ +
Sbjct: 217 GLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDA 276

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G       +  +M +    P V + N L+NG C  G +  A   F++MV +   P+
Sbjct: 277 LCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPN 336

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +++Y+T++   CK  M++EAL+LL  ++  +  P  +TYN L+DGL+K G +     L  
Sbjct: 337 VISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVE 396

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M  +G +PD IT+  L+  + + + +++A+ L + I   G       Y ++I GLCK  
Sbjct: 397 AMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGG 456

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           ++  A ++ +L+     +P+   ++ ++  +  +G
Sbjct: 457 RMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREG 491



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 105/364 (28%), Positives = 188/364 (51%), Gaps = 9/364 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE     ++   C  GK  DA +L+  M +    P+      ++ GL +   + +A  + 
Sbjct: 160 DEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLC 219

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV-SGCEPDVITYNTILRTMFD 234
             MV  G   D  TYN ++ G C  GQ + A+ LL+EM +     PDV T+N ++  +  
Sbjct: 220 SEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCK 279

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G   +A   +   +++G  P +++   L+   C +  ++ A EV D M   G  P++++
Sbjct: 280 LGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVIS 339

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC----WDAVDKIL 350
           Y++L+N  CK    D+A+ ++  +  R + P+++TYN LL  L   G     WD V+   
Sbjct: 340 YSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEA-- 397

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M  +  +P + TYN+L++   K   +D+A+  F  +V     P+I TYN ++  LCK 
Sbjct: 398 --MRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKG 455

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G +  A ++  LL+   C P + TYN +I+GL ++G +++A  L  +M+++G  P+ +T 
Sbjct: 456 GRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTF 515

Query: 471 RTLI 474
             L+
Sbjct: 516 DPLV 519



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 190/383 (49%), Gaps = 2/383 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC-EPDVITYNTILRTMFDNGKFKQAIG 243
           P  ++ N ++  + K     + ++L   +   G  +P ++T +  + ++   G+   A  
Sbjct: 53  PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
                +++G      T T L++ +C +     A+ + D    +G S D V Y +L+N  C
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K GK  DA+ ++  +   G+ PN I YN ++  L   G       +   M        VF
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           TYN LI+G C  G    A+   N+MV K + +PD+ T+N ++ ALCK GM+ EA  +  L
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGL 292

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P +++ N L++G   +GCM +A  ++ +M+E G  P+ I++ TLI G+C+   
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKM 352

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V+EA+ LL E+ +R        Y  ++ GL KS +V     ++E M +S   PD   ++ 
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNV 412

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++         ++A  L+Q +++
Sbjct: 413 LLDDYLKRECLDKALALFQHIVD 435



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 95/381 (24%), Positives = 196/381 (51%), Gaps = 3/381 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P  +T ++ +  L   GQ+  A +++ ++   G   D  T  T+++ +   G+  +A+  
Sbjct: 89  PSLVTLSIFINSLTHLGQMGLAFSVMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNL 148

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           +   + KG     + Y  LI  +CK      AIE+L  M   G  P+++ YN +V+  CK
Sbjct: 149 YDHAVSKGFSFDEVCYGTLINGLCKMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCK 208

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD--IMNEASHSPTV 362
           +G   +A  + + ++ +G+  +  TYN+L+H     G +    ++L+  +M E    P V
Sbjct: 209 EGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVR-PDV 267

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +T+NIL++ LCK G+V  A N F  M+ +  +PD+V+ N ++   C  G ++EA ++   
Sbjct: 268 YTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDR 327

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P +I+Y+TLI+G  K   +++A+ L  +M +  + PD +T+  L+ G  ++ +
Sbjct: 328 MVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGR 387

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V    DL++ +   G       Y +++    K + +D A+ + + ++ +   P+   ++ 
Sbjct: 388 VLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNI 447

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++  +   G  + A +++Q L
Sbjct: 448 LIDGLCKGGRMKAAKEIFQLL 468



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 160/326 (49%), Gaps = 1/326 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G +T+A  L   M  +    D     +LI G     + + A ++L  MVM
Sbjct: 200 NMVVDGLCKEGLVTEACGLCSEMVGKGICIDVFTYNSLIHGFCGAGQFQGAVRLLNEMVM 259

Query: 181 SGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
              V PD  T+N++V  LCK G +  A  +   M   G EPDV++ N ++      G   
Sbjct: 260 KEDVRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMS 319

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A   +   + +G  P +I+Y+ LI   CK   +  A+ +L +M      PD VTYN L+
Sbjct: 320 EAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLL 379

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +   K G+      ++  + + G  P+ ITYN LL     R C D    +   + +   S
Sbjct: 380 DGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGIS 439

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P + TYNILI+GLCK G +  A   F  +  K C+P+I TYN ++  L +EG+L+EA  L
Sbjct: 440 PNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEAL 499

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKK 445
           L  +      P  +T++ L+  L +K
Sbjct: 500 LLEMVDDGFPPNAVTFDPLVRALLEK 525



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 92/353 (26%), Positives = 174/353 (49%), Gaps = 11/353 (3%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP-PYLITYTILIEQVCKQCGIARAIE 278
           P +++ N +L ++     +   +        KG P P L+T +I I  +     +  A  
Sbjct: 53  PSIVSLNKLLSSIMKTKHYPTVVSLCSHLDSKGTPKPSLVTLSIFINSLTHLGQMGLAFS 112

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           V+  +   G   D  T  +L+   C +G+  +A+ + ++ +S+G   + + Y TL++ L 
Sbjct: 113 VMAKIVKRGFGVDPFTLTTLMKGLCLKGRTFEALNLYDHAVSKGFSFDEVCYGTLINGLC 172

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
             G      ++L  M +    P +  YN++++GLCK GLV  A    ++MV K    D+ 
Sbjct: 173 KMGKTRDAIELLRKMEKGGVRPNLIMYNMVVDGLCKEGLVTEACGLCSEMVGKGICIDVF 232

Query: 399 TYNTVLGALCKEGMLNEALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           TYN+++   C  G    A++LL+ ++      P + T+N L+D L K G + +A  ++G 
Sbjct: 233 TYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNVFGL 292

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M++ G+ PD ++   L+ G+C    + EA ++   + +RG      +Y  +I+G CK K 
Sbjct: 293 MIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKM 352

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFE 570
           VD A+++L  M      PD   ++ ++     DG+++    L+    EW + E
Sbjct: 353 VDEALRLLTEMHQRNLVPDTVTYNCLL-----DGLSKSGRVLY----EWDLVE 396



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 81/296 (27%), Positives = 151/296 (51%), Gaps = 1/296 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKV 174
           D  T N ++  FC  G+   A +L++ M  +  + PD +    L+  L ++  + +A  V
Sbjct: 230 DVFTYNSLIHGFCGAGQFQGAVRLLNEMVMKEDVRPDVYTFNILVDALCKLGMVAEARNV 289

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             +M+  G  PD ++ N ++ G C RG +  A  + D M   G  P+VI+Y+T++     
Sbjct: 290 FGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCK 349

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
                +A+    +  ++   P  +TY  L++ + K   +    ++++ M   G +PD++T
Sbjct: 350 VKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLIT 409

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L++   K+   D A+ +  +++  G+ PN  TYN L+  L   G   A  +I  +++
Sbjct: 410 YNVLLDDYLKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLS 469

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
                P + TYNI+INGL + GL+D A     +MV     P+ VT++ ++ AL ++
Sbjct: 470 VKGCRPNIRTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRALLEK 525



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 68/225 (30%), Positives = 127/225 (56%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  + N ++  +C RG +++A ++ D M  R ++P+      LI G  ++  +++A 
Sbjct: 298 LEPDVVSCNALMNGWCLRGCMSEAKEVFDRMVERGKLPNVISYSTLINGYCKVKMVDEAL 357

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M     VPDT+TYN ++ GL K G++     L++ M  SG  PD+ITYN +L   
Sbjct: 358 RLLTEMHQRNLVPDTVTYNCLLDGLSKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDY 417

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                  +A+  ++  +  G  P + TY ILI+ +CK   +  A E+   ++++GC P+I
Sbjct: 418 LKRECLDKALALFQHIVDTGISPNIRTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNI 477

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            TYN ++N   ++G  D+A  ++  ++  G  PN++T++ L+ +L
Sbjct: 478 RTYNIMINGLRREGLLDEAEALLLEMVDDGFPPNAVTFDPLVRAL 522



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 123/260 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N ++   C  G + +A  +  +M +R   PD   C  L+ G      + +A 
Sbjct: 263 VRPDVYTFNILVDALCKLGMVAEARNVFGLMIKRGLEPDVVSCNALMNGWCLRGCMSEAK 322

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V   MV  G +P+ I+Y+ ++ G CK   +  A+ LL EM      PD +TYN +L  +
Sbjct: 323 EVFDRMVERGKLPNVISYSTLINGYCKVKMVDEALRLLTEMHQRNLVPDTVTYNCLLDGL 382

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G+        +     G  P LITY +L++   K+  + +A+ +   +   G SP+I
Sbjct: 383 SKSGRVLYEWDLVEAMRASGQAPDLITYNVLLDDYLKRECLDKALALFQHIVDTGISPNI 442

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN L++  CK G+   A  +   L  +G  PN  TYN +++ L   G  D  + +L  
Sbjct: 443 RTYNILIDGLCKGGRMKAAKEIFQLLSVKGCRPNIRTYNIMINGLRREGLLDEAEALLLE 502

Query: 353 MNEASHSPTVFTYNILINGL 372
           M +    P   T++ L+  L
Sbjct: 503 MVDDGFPPNAVTFDPLVRAL 522


>gi|357485461|ref|XP_003613018.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355514353|gb|AES95976.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 894

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/420 (30%), Positives = 210/420 (50%), Gaps = 6/420 (1%)

Query: 152 FHFC------INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRS 205
           F FC       +LI G  +I  +  A KV +IM   G + + ++Y  ++ G C+ G+I  
Sbjct: 219 FGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDE 278

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A+ L  +M   GC PDV TY  ++    + GK  +A+ F+++ +  G  P + TYT+LI+
Sbjct: 279 ALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLID 338

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             CK   +   +E+L  M  +G    +V +N+L++  CK+G  +DA+ V++++    + P
Sbjct: 339 YFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCP 398

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           NS TYN L+     +   D    +L+ M E   SP + TYN LI+GLCK  +VD A    
Sbjct: 399 NSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLH 458

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           + M+     PD  T+   +  LCK G + +A Q+   L           Y  LIDG  K 
Sbjct: 459 HLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKA 518

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
                A +L+ +M+  G  P+ IT   L+ G  +  +VE+A+ L+  +GK   K     Y
Sbjct: 519 EKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTY 578

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++I  + +    D A   L+ MISS  +P+   ++  +K     G   EA ++  K+ E
Sbjct: 579 TILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKE 638



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/479 (24%), Positives = 223/479 (46%), Gaps = 35/479 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  +C   +L DA K+ +IM +   + +     NLI G   + +I++A ++ 
Sbjct: 224 DSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELF 283

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD  TY ++V   C+ G+   A+   +EM  +G EP+V TY  ++      
Sbjct: 284 FQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKV 343

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  + +      L KG    ++ +  LI+  CK+  +  AI VLD M +    P+  TY
Sbjct: 344 GKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTY 403

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+   C++   D A+ ++N +    + PN +TYNTL+H L      D+  ++  +M +
Sbjct: 404 NELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIK 463

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFN----------------------------- 386
               P   T+   I+ LCK G V++A   F                              
Sbjct: 464 DGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSD 523

Query: 387 ------QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                 +M+ + C P+ +T+N +L  L KEG + +A+ L+ ++      P + TY  LI+
Sbjct: 524 AHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIE 583

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
            + ++   ++A +   QM+ +G  P+ +T+   I  +CR  ++ EA +++ +I + G  +
Sbjct: 584 EILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILL 643

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            +  Y ++++      ++D A  VL  M  +  +P    +S ++K +  +   +E   L
Sbjct: 644 DSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGL 702



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 220/483 (45%), Gaps = 32/483 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T   ++  FC  GK+ +  +++  M  +  +        LI G  +   +E A 
Sbjct: 326 IEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAI 385

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL  M ++   P++ TYN ++ G C++  +  A+ALL++M  +   P+++TYNT++  +
Sbjct: 386 CVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGL 445

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                   A       ++ G  P   T+   I+ +CK   + +A +V + +  +    + 
Sbjct: 446 CKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANE 505

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y +L++  CK  K+ DA L+   +L  G  PNSIT+N LL  L   G  +    ++D+
Sbjct: 506 FLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDV 565

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +    PTV TY ILI  + +    DRA    +QM+S  CQP++VTY   + A C++G 
Sbjct: 566 MGKFDAKPTVHTYTILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGR 625

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L EA +++  +           Y+ L++     G ++ A  +  +M + G  P   T+  
Sbjct: 626 LLEAEEMVVKIKEEGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSI 685

Query: 473 L-----------------------------IWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           L                             IW   +    E    L +++ ++G     +
Sbjct: 686 LLKHLIFEKYNKEGMGLDLNSTNISVDNANIW---KIADFEIITMLFEKMVEQGCVPNVN 742

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I GLCK + + +A ++   M  S   P + + ++++      GM EEA +L   +
Sbjct: 743 TYSKLIKGLCKVEHLSLAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSM 802

Query: 564 IEW 566
           +E+
Sbjct: 803 MEY 805



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/402 (28%), Positives = 195/402 (48%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L   L R   I++ + + + M+  G  P+ I++N MV   CK G +  A A    +   G
Sbjct: 161 LFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFG 220

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              D  TY +++       +   A   ++   ++GC    ++YT LI   C+   I  A+
Sbjct: 221 FCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEAL 280

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E+   M  +GC PD+ TY  LV   C+ GK  +A+     ++  G+EPN  TY  L+   
Sbjct: 281 ELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYF 340

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D   ++L  M E     +V  +N LI+G CK G+++ AI   + M      P+ 
Sbjct: 341 CKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNS 400

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            TYN ++   C++  ++ A+ LL+ +  +  SP L+TYNTLI GL K   ++ A  L+  
Sbjct: 401 RTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHL 460

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+++G  PD  T    I   C+  +VE+A  + + + ++  +     Y  +I G CK++K
Sbjct: 461 MIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEK 520

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
              A  + + M+     P+   F+ ++  +  +G  E+A  L
Sbjct: 521 FSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSL 562



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 192/407 (47%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A  VL ++          +YN +   L + G I     L  +M   G EP++I++NT+
Sbjct: 137 HEARFVLNLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTM 196

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G    A  ++   ++ G      TYT LI   CK   +  A +V + M  EGC
Sbjct: 197 VNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGC 256

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             + V+Y +L++  C+ GK D+A+ +   +   G  P+  TY  L+ +    G      K
Sbjct: 257 LRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALK 316

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
             + M E    P V+TY +LI+  CK G +D  +   + M+ K     +V +N ++   C
Sbjct: 317 FFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGLVSSVVPFNALIDGYC 376

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K GM+ +A+ +L  +  +   P   TYN LI G  +K  M++AM L  +M EN +SP+ +
Sbjct: 377 KRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLV 436

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ TLI G C+A  V+ A  L   + K G       +   I  LCK  KV+ A QV E +
Sbjct: 437 TYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESL 496

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
                + ++ +++ ++          +A+ L+++++    F    T 
Sbjct: 497 KEKHAEANEFLYTALIDGYCKAEKFSDAHLLFKRMLFEGCFPNSITF 543



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 105/377 (27%), Positives = 173/377 (45%), Gaps = 7/377 (1%)

Query: 191 NMMVGGLCKRGQIRSAIALL--DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           N M+       + R  + LL   E S+S     V +YN +   +   G   +    +KD 
Sbjct: 127 NSMIKSCVSSHEARFVLNLLTHHEFSLS-----VTSYNRLFMVLSRFGLIDELNCLFKDM 181

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           L  G  P LI++  ++   CK   +  A      +   G   D  TY SL+   CK  + 
Sbjct: 182 LNDGVEPNLISFNTMVNAHCKIGNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHEL 241

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            DA  V   +   G   N ++Y  L+H     G  D   ++   M E    P V TY +L
Sbjct: 242 GDAYKVFEIMPQEGCLRNEVSYTNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVL 301

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           +   C+ G    A+  F +MV    +P++ TY  ++   CK G ++E +++L  +     
Sbjct: 302 VAAFCEVGKETEALKFFEEMVENGIEPNVYTYTVLIDYFCKVGKMDEGMEMLSTMLEKGL 361

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
              ++ +N LIDG  K+G ME A+ +   M  N + P+  T+  LI GFCR   ++ A+ 
Sbjct: 362 VSSVVPFNALIDGYCKRGMMEDAICVLDSMKLNKVCPNSRTYNELICGFCRKKSMDRAMA 421

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           LL ++ +         Y  +IHGLCK++ VD A ++  LMI   + PD   F   +  + 
Sbjct: 422 LLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLHHLMIKDGFVPDQRTFCAFIDCLC 481

Query: 549 DDGMTEEAYKLWQKLIE 565
             G  E+A+++++ L E
Sbjct: 482 KMGKVEQAHQVFESLKE 498



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 113/470 (24%), Positives = 211/470 (44%), Gaps = 26/470 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           + +T N+++  FC +  +  A  L++ M      P+      LI GL +   ++ A ++ 
Sbjct: 399 NSRTYNELICGFCRKKSMDRAMALLNKMYENKLSPNLVTYNTLIHGLCKARVVDSAWRLH 458

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M+  G VPD  T+   +  LCK G++  A  + + +     E +   Y  ++      
Sbjct: 459 HLMIKDGFVPDQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKA 518

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            KF  A   +K  L +GC P  IT+ +L++ + K+  +  A+ ++D M      P + TY
Sbjct: 519 EKFSDAHLLFKRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTY 578

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+    ++  +D A + ++ ++S G +PN +TY   + +   +G     ++++  + E
Sbjct: 579 TILIEEILRESDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKE 638

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC-----KE 410
                  F Y++L+N     G +D A     +M    C+P   TY+ +L  L      KE
Sbjct: 639 EGILLDSFIYDVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKE 698

Query: 411 GM---LNEA------------------LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           GM   LN                      L   +    C P + TY+ LI GL K   + 
Sbjct: 699 GMGLDLNSTNISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLS 758

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A  L+  M E+GISP +  H +L+   C+    EEA+ LL  + +  +     +Y+L++
Sbjct: 759 LAFRLFNHMKESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLV 818

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            GL +    + A ++   ++S  Y  D+ V+  ++  +   G  +E  +L
Sbjct: 819 CGLFEQGNQEKAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQL 868



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 192/419 (45%), Gaps = 26/419 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D++T    +   C  GK+  A ++ + +  ++   +      LI G  + ++   A  + 
Sbjct: 469 DQRTFCAFIDCLCKMGKVEQAHQVFESLKEKHAEANEFLYTALIDGYCKAEKFSDAHLLF 528

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  P++IT+N+++ GL K G++  A++L+D M     +P V TY  ++  +   
Sbjct: 529 KRMLFEGCFPNSITFNVLLDGLRKEGKVEDAMSLVDVMGKFDAKPTVHTYTILIEEILRE 588

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
             F +A  F    +  GC P ++TYT  I+  C+Q  +  A E++  +  EG   D   Y
Sbjct: 589 SDFDRANMFLDQMISSGCQPNVVTYTAFIKAYCRQGRLLEAEEMVVKIKEEGILLDSFIY 648

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH-------------------- 335
           + LVN     G+ D A  V+  +   G EP+  TY+ LL                     
Sbjct: 649 DVLVNAYGCIGQLDSAFGVLIRMFDTGCEPSRQTYSILLKHLIFEKYNKEGMGLDLNSTN 708

Query: 336 -SLGSRGCWDAVD-----KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
            S+ +   W   D      + + M E    P V TY+ LI GLCK   +  A   FN M 
Sbjct: 709 ISVDNANIWKIADFEIITMLFEKMVEQGCVPNVNTYSKLIKGLCKVEHLSLAFRLFNHMK 768

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
                P    +N++L + CK GM  EAL+LL  +   +    L +Y  L+ GL ++G  E
Sbjct: 769 ESGISPSENIHNSLLSSCCKLGMHEEALRLLDSMMEYNHLAHLESYKLLVCGLFEQGNQE 828

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           KA  ++  ++  G + D++  + L+ G  R   V+E   L   + K G ++ +  + ++
Sbjct: 829 KAEEIFRSLLSCGYNYDEVVWKVLLDGLVRKGYVDECSQLRDIMEKTGCRLHSDTHTML 887



 Score = 63.2 bits (152), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 52/240 (21%), Positives = 99/240 (41%), Gaps = 53/240 (22%)

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           TV +Y  L+  L + G +  A N  N M+ K+C                    +EA  +L
Sbjct: 102 TVHSYQPLLFILVRNGFLRAAENVRNSMI-KSCVSS-----------------HEARFVL 143

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP--------------- 465
           +LL     S  + +YN L   L++ G +++   L+  M+ +G+ P               
Sbjct: 144 NLLTHHEFSLSVTSYNRLFMVLSRFGLIDELNCLFKDMLNDGVEPNLISFNTMVNAHCKI 203

Query: 466 --------------------DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
                               D  T+ +LI G+C+  ++ +A  + + + + G      +Y
Sbjct: 204 GNVVVAKAYFCGLMKFGFCCDSFTYTSLILGYCKIHELGDAYKVFEIMPQEGCLRNEVSY 263

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +IHG C+  K+D A+++   M      PD   ++ +V    + G   EA K +++++E
Sbjct: 264 TNLIHGFCEVGKIDEALELFFQMKEDGCFPDVPTYTVLVAAFCEVGKETEALKFFEEMVE 323


>gi|297605515|ref|NP_001057291.2| Os06g0249500 [Oryza sativa Japonica Group]
 gi|255676892|dbj|BAF19205.2| Os06g0249500 [Oryza sativa Japonica Group]
          Length = 690

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 230/433 (53%), Gaps = 14/433 (3%)

Query: 154 FCIN-LIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLD 211
           F  N ++  L R+  +   +++  +M     V PD +TY ++V GLCK G++  A+ +LD
Sbjct: 137 FAFNSILAALARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDALRVLD 196

Query: 212 EMSVSGCE--PDVITYNTILRTMFDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQV 267
            MS    +  PDV+T NT++  +  +G+ ++A+ F + ++    GCPP  +TY  LI+  
Sbjct: 197 GMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNCLIDAF 256

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP-- 325
           C+   I+ A E+++ M  EG   +IVT N++V   C+ G+   A+        R + P  
Sbjct: 257 CRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFRE--KRTVWPEG 314

Query: 326 --NSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             N++TY+TL+ +L  +     A++   + M+E  HSP    Y  +I+GL + G ++ A 
Sbjct: 315 KGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEG-HSPDAIMYFTMISGLTQAGRLEDAC 373

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           +  + M     + D   YN ++   C++  L+EA +LL  +      P + TYNTL+ G 
Sbjct: 374 SMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLSGS 433

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K G       L G+M+++G  P  IT  TL+ G+C+  +++EA+ +L+ + + G    N
Sbjct: 434 CKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHPNN 493

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +I  LCK   VD+AI++ + M       + T F+ ++K + D  M E+A++L  +
Sbjct: 494 VIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEKAFELMDQ 553

Query: 563 LIEWKVFEKGTTL 575
           + E + F    T+
Sbjct: 554 MREERCFPDYVTV 566



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/406 (26%), Positives = 189/406 (46%), Gaps = 44/406 (10%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ--IPDFHFCINLIRGLIRIDRIEK 170
           V  D  T   ++   C  G++ DA +++D M+R++    PD      ++ GL +  R+++
Sbjct: 168 VRPDVVTYGILVNGLCKAGRVGDALRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQE 227

Query: 171 ASKVLQIMVMS--GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           A   ++  + S  G  P+T+TYN ++   C+ G I  A  L+++M   G   +++T NTI
Sbjct: 228 ALAFVEQRMSSVHGCPPNTVTYNCLIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTI 287

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPP---YLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           +  +   G+   A+ F++++ R   P      +TY+ L+  +     +  A+E+  +   
Sbjct: 288 VGGLCRAGRTGAALEFFREK-RTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMS 346

Query: 286 EGCSPDIV-----------------------------------TYNSLVNFSCKQGKYDD 310
           EG SPD +                                    YN L+   C++ +  +
Sbjct: 347 EGHSPDAIMYFTMISGLTQAGRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHE 406

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  ++  +   G+ P+  TYNTLL      G + AVD++L  M +    P+V T+  L++
Sbjct: 407 AYELLQEMKEVGIRPDVCTYNTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVH 466

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G CK G +D A+     M      P+ V YNT++  LCK G ++ A++L   +   S   
Sbjct: 467 GYCKVGKIDEALRILRSMDESGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPA 526

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI-W 475
            + T+N L+ GL  K   EKA  L  QM E    PD +T   L+ W
Sbjct: 527 NVTTFNALLKGLRDKNMPEKAFELMDQMREERCFPDYVTVDVLMEW 572



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 188/402 (46%), Gaps = 48/402 (11%)

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWK-DQLRKGCP---PYLITYTILIEQVCKQCGIARA 276
           DV  +N+IL  +    + +   G  +   L +GC    P ++TY IL+  +CK   +  A
Sbjct: 135 DVFAFNSILAAL---ARVRDVPGMARIYALMQGCASVRPDVVTYGILVNGLCKAGRVGDA 191

Query: 277 IEVLDDMAIEGCS--PDIVTYNSLVNFSCKQGKYDDAVLVINNLLS--RGMEPNSITYNT 332
           + VLD M+ +     PD+VT N++V+  CK G+  +A+  +   +S   G  PN++TYN 
Sbjct: 192 LRVLDGMSRQDLDIRPDVVTLNTVVDGLCKSGRVQEALAFVEQRMSSVHGCPPNTVTYNC 251

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ--MVS 390
           L+ +    G      ++++ M        + T N ++ GLC+ G    A+  F +   V 
Sbjct: 252 LIDAFCRVGNISMAYELVEKMENEGVPQNIVTLNTIVGGLCRAGRTGAALEFFREKRTVW 311

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
              + + VTY+T++GAL     +  A++L H       SP  I Y T+I GL + G +E 
Sbjct: 312 PEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQAGRLED 371

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL---KEIGKRGN--------- 498
           A  +   M E G   D   +  LI GFCR  ++ EA +LL   KE+G R +         
Sbjct: 372 ACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTYNTLLS 431

Query: 499 ----------------KMRNSA-------YRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
                           KM +         +  ++HG CK  K+D A+++L  M  S   P
Sbjct: 432 GSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDESGIHP 491

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           ++ +++T++  +   G  + A +L+ ++ E  V    TT  A
Sbjct: 492 NNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNA 533



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/327 (29%), Positives = 157/327 (48%), Gaps = 4/327 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVL-- 175
           T N ++  FC  G ++ A +L++ M     +P     +N ++ GL R  R   A +    
Sbjct: 248 TYNCLIDAFCRVGNISMAYELVEKMENEG-VPQNIVTLNTIVGGLCRAGRTGAALEFFRE 306

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  V   G  + +TY+ +VG L     +  A+ L  E    G  PD I Y T++  +   
Sbjct: 307 KRTVWPEGKGNAVTYSTLVGALLHTNNVGMAMELFHEKMSEGHSPDAIMYFTMISGLTQA 366

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ + A          G       Y ILI   C++  +  A E+L +M   G  PD+ TY
Sbjct: 367 GRLEDACSMASSMKEAGFKLDTKAYNILIAGFCRKKRLHEAYELLQEMKEVGIRPDVCTY 426

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++ SCK G +     ++  ++  G +P+ IT+ TL+H     G  D   +IL  M+E
Sbjct: 427 NTLLSGSCKAGDFAAVDELLGKMIDDGCQPSVITFGTLVHGYCKVGKIDEALRILRSMDE 486

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P    YN LI+ LCK G VD AI  F++M  K+   ++ T+N +L  L  + M  +
Sbjct: 487 SGIHPNNVIYNTLIDFLCKRGDVDLAIELFDEMKEKSVPANVTTFNALLKGLRDKNMPEK 546

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGL 442
           A +L+  +    C P  +T + L++ L
Sbjct: 547 AFELMDQMREERCFPDYVTVDVLMEWL 573


>gi|225433790|ref|XP_002269080.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Vitis vinifera]
          Length = 1045

 Score =  211 bits (536), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 226/452 (50%), Gaps = 23/452 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++ +FC  G L  A K  D M R    P+      LI   ++  ++  A+++ 
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF 573

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M+  G +P+ +TY  ++ G CK GQI  A  +   M  +   PDV  Y  I     D+
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI-----DD 628

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  +               P + TY  L++ +CK   +  A ++LD M++EGC P+ + Y
Sbjct: 629 GNIRD--------------PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  CK GK D+A +V   +  RG  PN  TY++L+  L      D   K+L  M E
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            S +P V  Y  +I+GLCK G  D A    + M  K C P++VTY  ++    K G +++
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            L+L+  +    C+P  +TY  LI+     G ++ A  L  +M +         +R +I 
Sbjct: 795 CLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE 854

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS--SRY 533
           GF R   +  ++ LL EI +        AYR++I   CK+ ++++A+++ + M S  S  
Sbjct: 855 GFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYS 912

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             D  ++S++++ ++     ++A++L+  +I+
Sbjct: 913 AADKDLYSSLIESLSLASKVDKAFELYADMIK 944



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 154/591 (26%), Positives = 256/591 (43%), Gaps = 54/591 (9%)

Query: 22  WCSRQVSLQH------------GVVNNHRT--QFYSQLRD-----LGAGRNVSLK--CRG 60
           W  RQ+   H            G   N R   QF  ++RD     LG   NV ++  CR 
Sbjct: 151 WAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRN 210

Query: 61  LPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSL---PSSDGPFVENDE 117
              NV ++ +  +   +   +   L  N  +R      +     L     SD  F   D 
Sbjct: 211 GLWNVALEELGRLK--DLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF-NMDG 267

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
            T    +   C  G+  +A  LI+   +     D      +I GL      E+A   L  
Sbjct: 268 YTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSR 324

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  S  +P+ +TY +++ G  ++ Q+     +L  M   GC P    +N+++     +G 
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD-------DMAIEGCSP 290
           +  A    K     GC P  + Y ILI  +C    +  +++VL+       +M       
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAHVVL 443

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           + V  ++L    C  GK++ A  +I  ++S+G  P++ TY+ ++  L +    D    + 
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           + M      P VFTY ILI+  CK GL+ +A   F++MV   C P++VTY  ++ A  K 
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD--- 467
             ++ A +L  ++    C P ++TY  LIDG  K G +EKA  +Y +M  N   PD    
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 468 -------------ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
                         T+  L+ G C+A +V+EA DLL  +   G +  +  Y  +I G CK
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             K+D A  V   M    Y P+   +S+++ ++  D   + A K+  +++E
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 206/427 (48%), Gaps = 26/427 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +    K++ A++L ++M     IP+      LI G  +  +IEKA ++   M
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 179 VMSGGVPDT----------------ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
             +  +PD                  TY  +V GLCK  +++ A  LLD MSV GCEP+ 
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           I Y+ ++      GK  +A   +     +G  P + TY+ LI+++ K   +  A++VL  
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M    C+P+++ Y  +++  CK GK D+A  +++ +  +G  PN +TY  ++   G  G 
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG- 790

Query: 343 WDAVDKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
              VDK L++M +      +P   TY +LIN  C  GL+D A    ++M        +  
Sbjct: 791 --KVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAG 848

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  V+    +E ++  +L LL  +  +   P +  Y  LID   K G +E A+ L+ +M 
Sbjct: 849 YRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMS 906

Query: 460 E--NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
              +  + D   + +LI     A +V++A +L  ++ KRG     S +  ++ GL +  +
Sbjct: 907 SCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966

Query: 518 VDMAIQV 524
            + A+Q+
Sbjct: 967 WEEALQL 973



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 166/381 (43%), Gaps = 35/381 (9%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG   + +  T   ++   C   K+ +A  L+D+M+     P+      LI G  ++ ++
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           ++A  V   M   G  P+  TY+ ++  L K  ++  A+ +L  M  + C P+VI Y  +
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM 747

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +   GK  +A         KGC P ++TYT +I+   K   + + +E++  M  +GC
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P+ VTY  L+N  C  G  DDA  +++ +       +   Y  ++        +     
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE--FIISLG 865

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +LD + E    P +  Y ILI+  CK G ++ A+    +M S        +Y+     L 
Sbjct: 866 LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSS------CTSYSAADKDL- 918

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
                                     Y++LI+ L+    ++KA  LY  M++ G  P+  
Sbjct: 919 --------------------------YSSLIESLSLASKVDKAFELYADMIKRGGIPELS 952

Query: 469 THRTLIWGFCRADQVEEAVDL 489
               L+ G  R ++ EEA+ L
Sbjct: 953 IFFYLVKGLIRINRWEEALQL 973


>gi|242058301|ref|XP_002458296.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
 gi|241930271|gb|EES03416.1| hypothetical protein SORBIDRAFT_03g030790 [Sorghum bicolor]
          Length = 1035

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 236/478 (49%), Gaps = 41/478 (8%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVL-QIMVMSGGV 184
           FC  G L        ++ +     D H  IN L+ GL    R+ +A  VL Q M   G +
Sbjct: 104 FCRMGHLEHGFAAFGLILKTGWRMD-HIVINQLLNGLCDGKRVGEAMDVLLQRMPELGCM 162

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMS---VSGCEPDVITYNTILRTMFDNGKFKQA 241
           PDT++YN+++ GLC   +   A+ LL  M+   V  C P+V++Y+T++   F  G+  + 
Sbjct: 163 PDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVINGFFTEGQVDKP 222

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA------------------------- 276
              + + + +G PP ++TYT +I+ +CK     RA                         
Sbjct: 223 YNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVKPNIDTYNCLIHG 282

Query: 277 ----------IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
                     + +L++M+  G  P+  TY SL+N+ CK G+  +A    ++++ +G++P+
Sbjct: 283 YLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFFFDSMIGKGIKPS 342

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
             TY  +LH   ++G    +  +L++M     SP    +NI  +   K G++D+A++ FN
Sbjct: 343 VTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFN 402

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M  +   PD V+Y  ++ ALCK G +++A    + +     +P ++ +++L+ GL    
Sbjct: 403 KMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVD 462

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
             EK   L+ +M+  GI P+ +   T++   C+  +V E   L+  I   G +    +Y 
Sbjct: 463 KWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYN 522

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            +I G C +  +D A ++LE M+S   KPD   ++T++      G  + AY  ++K++
Sbjct: 523 TLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKML 580



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 122/476 (25%), Positives = 232/476 (48%), Gaps = 35/476 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F + G++     L   M  R   PD      +I GL +    ++A  V Q M+ +G
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  TYN ++ G    G+ +  + +L+EMS  G +P+  TY ++L  +  NG+ ++A 
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328

Query: 243 GFWKDQLRKGCPPYLITYTILIE----------------------------------QVC 268
            F+   + KG  P + TY I++                                      
Sbjct: 329 FFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAY 388

Query: 269 KQCGIA-RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
            +CGI  +A+++ + M  +G SPD V+Y +L++  CK G+ DDA +  N +++ G+ P+ 
Sbjct: 389 AKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDI 448

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           + +++L++ L +   W+ V+++   M      P +  +N ++  LCK G V       + 
Sbjct: 449 VVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDS 508

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           +     +PD+++YNT++   C  G ++EA +LL  +      P   +YNTL+ G  K G 
Sbjct: 509 IECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGR 568

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           ++ A   + +M+ NGI+P  +T+ T++ G  +  +  EA +L   +   G K     Y +
Sbjct: 569 IDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNI 628

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +++GLCKS  VD AI++ + + S   + +   F+ ++  +   G  E+A  L+  +
Sbjct: 629 ILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAI 684



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/392 (25%), Positives = 193/392 (49%), Gaps = 4/392 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L  + ++G L++   L+++M      P+ H          +   I+KA  +   M   G
Sbjct: 349 MLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQG 408

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD ++Y  ++  LCK G++  A    ++M   G  PD++ +++++  +    K+++  
Sbjct: 409 LSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVE 468

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + + L  G  P ++ +  ++  +CK+  +     ++D +   G  PD+++YN+L++  
Sbjct: 469 ELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGH 528

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G  D+A  ++  ++S G++P+S +YNTLLH     G  D+       M     +P V
Sbjct: 529 CLAGTIDEASKLLEGMVSVGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGV 588

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN +++GL +      A   +  M++   + DI TYN +L  LCK   ++EA+++   
Sbjct: 589 VTYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQN 648

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L        +IT+N +I  L K G  E AM L+  +  NG+  + +T+R ++        
Sbjct: 649 LCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGS 708

Query: 483 VEEAVDLLKEIGKRG----NKMRNSAYRLVIH 510
           +EE   L   + K G    ++M N+  R ++H
Sbjct: 709 LEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 740



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 110/456 (24%), Positives = 211/456 (46%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +L   C  G+  +A    D M  +   P       ++ G      + +   +L +M
Sbjct: 310 TYGSLLNYLCKNGRCREARFFFDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLM 369

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V +G  P+   +N+      K G I  A+ + ++M   G  PD ++Y  ++  +   G+ 
Sbjct: 370 VANGISPNHHIFNIFFSAYAKCGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRV 429

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   +   + +G  P ++ ++ L+  +C      +  E+  +M   G  P+IV +N++
Sbjct: 430 DDAEVKFNQMINEGVTPDIVVFSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTI 489

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK+G+  +   +++++   G+ P+ I+YNTL+      G  D   K+L+ M     
Sbjct: 490 LCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVSVGL 549

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  F+YN L++G CK G +D A + F +M+S    P +VTYNT+L  L +    +EA +
Sbjct: 550 KPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSEAKE 609

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +  S     + TYN +++GL K  C+++A+ ++  +   G+  + IT   +I    
Sbjct: 610 LYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIGALL 669

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  + E+A+DL   I   G       YRLV+  L +   ++    +   M  +   P+  
Sbjct: 670 KGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAPNSQ 729

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           + + +V+++   G    A     KL E     + +T
Sbjct: 730 MLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST 765



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 135/508 (26%), Positives = 225/508 (44%), Gaps = 63/508 (12%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N IL N C  G++ +  +L+D +      PD      LI G      I++ASK+L+ MV 
Sbjct: 487 NTILCNLCKEGRVMEGQRLVDSIECMGVRPDVISYNTLIDGHCLAGTIDEASKLLEGMVS 546

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD+ +YN ++ G CK G+I SA +   +M  +G  P V+TYNTIL  +F   +F +
Sbjct: 547 VGLKPDSFSYNTLLHGYCKAGRIDSAYSHFRKMLSNGITPGVVTYNTILHGLFQTKRFSE 606

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + +  G    + TY I++  +CK   +  AI++  ++  +G   +I+T+N ++ 
Sbjct: 607 AKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNLCSKGLQLNIITFNIMIG 666

Query: 301 FSCKQGKYDDAV-------------------LVINNLLSRG-----------ME-----P 325
              K G+ +DA+                   LV+ NL+  G           ME     P
Sbjct: 667 ALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSLEEFDSLFSAMEKNGTAP 726

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC------------ 373
           NS   N L+  L  RG        L  ++E + S    T ++LI+               
Sbjct: 727 NSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSMLISIFSSDEYQHHAKSLP 786

Query: 374 -KYGL---------------VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            KY +               +D A + F +M+ K   PD+VTYNT+L  L + G  +EA 
Sbjct: 787 KKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAK 846

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L   +  S     + TYN +++GL K  C+++A  ++  +   G+  + IT   +I   
Sbjct: 847 ELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGAL 906

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +  + E+A+DL   I   G       YRLV   L +   ++    +   M  S    D 
Sbjct: 907 LKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDS 966

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            + + +V+++   G    A     KL E
Sbjct: 967 RLLNALVRRLLQRGDISRAGAYLSKLDE 994



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/415 (25%), Positives = 190/415 (45%), Gaps = 39/415 (9%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIA----------------------------------- 208
            P+  TY++++G  C+ G +    A                                   
Sbjct: 91  APNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEAMD 150

Query: 209 -LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF---WKDQLRKGCPPYLITYTILI 264
            LL  M   GC PD ++YN +L+ + +  + ++A+       D     CPP +++Y+ +I
Sbjct: 151 VLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYSTVI 210

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
                +  + +   +  +M   G  PD+VTY ++++  CK   +D A  V   ++  G++
Sbjct: 211 NGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNGVK 270

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN  TYN L+H   S G W  V ++L+ M+     P   TY  L+N LCK G    A   
Sbjct: 271 PNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREARFF 330

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F+ M+ K  +P + TY  +L     +G L+E   LL+L+  +  SP    +N      AK
Sbjct: 331 FDSMIGKGIKPSVTTYGIMLHGYATKGALSEMHDLLNLMVANGISPNHHIFNIFFSAYAK 390

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G ++KAM ++ +M + G+SPD +++  LI   C+  +V++A     ++   G       
Sbjct: 391 CGIIDKAMDIFNKMRQQGLSPDAVSYGALIDALCKLGRVDDAEVKFNQMINEGVTPDIVV 450

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +  +++GLC   K +   ++   M++    P+   F+TI+  +  +G   E  +L
Sbjct: 451 FSSLVYGLCTVDKWEKVEELFFEMLNVGIHPNIVFFNTILCNLCKEGRVMEGQRL 505



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 97/413 (23%), Positives = 184/413 (44%), Gaps = 28/413 (6%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N IL       + ++A +L   M       D +    ++ GL + + +++A K+ Q +
Sbjct: 590  TYNTILHGLFQTKRFSEAKELYLNMINSGTKWDIYTYNIILNGLCKSNCVDEAIKMFQNL 649

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
               G   + IT+N+M+G L K G+   A+ L   +  +G   +V+TY  ++  + + G  
Sbjct: 650  CSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVQNVVTYRLVVENLIEEGSL 709

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            ++    +    + G  P       L+ ++  +  I+RA   L  +     S +  T + L
Sbjct: 710  EEFDSLFSAMEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSML 769

Query: 299  VN-FSC---------------------------KQGKYDDAVLVINNLLSRGMEPNSITY 330
            ++ FS                            K  + DDA  +   +L +G+ P+ +TY
Sbjct: 770  ISIFSSDEYQHHAKSLPKKYRILNEANSSALIKKARRIDDAYSLFREMLMKGLTPDVVTY 829

Query: 331  NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
            NT+LH L   G +    ++   M  +     ++TYNI++NGLCK   VD A   F  + S
Sbjct: 830  NTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIILNGLCKSNCVDEAFKMFQSLCS 889

Query: 391  KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
            K  Q +I+T+N ++GAL K G   +A+ L   +  +   P ++TY  + + L ++G +E+
Sbjct: 890  KGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIEEGSLEE 949

Query: 451  AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
               L+  M ++G   D      L+    +   +  A   L ++ ++   +  S
Sbjct: 950  FDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEAS 1002



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 146/307 (47%), Gaps = 14/307 (4%)

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVN-FSCKQGKYD-----DAVLVINNLLSRG--- 322
           G+  A+++ D++        +V +N L+   S   G+       + V+ + N + R    
Sbjct: 29  GLGDALKLFDELLPHARPASVVAFNHLLAAVSRSSGRRSTTSESETVVSLFNRMVRDCYI 88

Query: 323 -MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            + PN  TY+ L+      G  +       ++ +          N L+NGLC    V  A
Sbjct: 89  KVAPNRCTYSILIGCFCRMGHLEHGFAAFGLILKTGWRMDHIVINQLLNGLCDGKRVGEA 148

Query: 382 INSFNQ-MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS---SCSPCLITYNT 437
           ++   Q M    C PD V+YN +L  LC E    EAL+LLH++      SC P +++Y+T
Sbjct: 149 MDVLLQRMPELGCMPDTVSYNILLKGLCNEKRAEEALELLHMMADDQVWSCPPNVVSYST 208

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +I+G   +G ++K   L+ +MM+ GI PD +T+ T+I G C+A   + A  + +++   G
Sbjct: 209 VINGFFTEGQVDKPYNLFLEMMDRGIPPDVVTYTTVIDGLCKAQLFDRAEAVFQQMIDNG 268

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K     Y  +IHG     K    +++LE M +   KP+   + +++  +  +G   EA 
Sbjct: 269 VKPNIDTYNCLIHGYLSIGKWKEVVRMLEEMSAGGPKPNCCTYGSLLNYLCKNGRCREAR 328

Query: 558 KLWQKLI 564
             +  +I
Sbjct: 329 FFFDSMI 335



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 52/204 (25%), Positives = 92/204 (45%)

Query: 167  RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
            RI+ A  + + M+M G  PD +TYN ++ GL + G+   A  L   M  S  + ++ TYN
Sbjct: 806  RIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYN 865

Query: 227  TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
             IL  +  +    +A   ++    KG    +IT+ I+I  + K      A+++   +   
Sbjct: 866  IILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPAN 925

Query: 287  GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
            G  PD+VTY  +     ++G  ++   +   +   G   +S   N L+  L  RG     
Sbjct: 926  GLVPDVVTYRLVAENLIEEGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRA 985

Query: 347  DKILDIMNEASHSPTVFTYNILIN 370
               L  ++E + S    T + LI+
Sbjct: 986  GAYLSKLDEKNFSLEASTTSELIS 1009



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 47/194 (24%), Positives = 96/194 (49%), Gaps = 3/194 (1%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKL-IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
            D  T N IL      G+ ++A +L + ++  R Q+  + + I ++ GL + + +++A K+
Sbjct: 825  DVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNI-ILNGLCKSNCVDEAFKM 883

Query: 175  LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             Q +   G   + IT+N+M+G L K G+   A+ L   +  +G  PDV+TY  +   + +
Sbjct: 884  FQSLCSKGLQLNIITFNIMIGALLKGGRKEDAMDLFAAIPANGLVPDVVTYRLVAENLIE 943

Query: 235  NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             G  ++  G +    + G P        L+ ++ ++  I+RA   L  +  +  S +  T
Sbjct: 944  EGSLEEFDGLFLTMEKSGTPLDSRLLNALVRRLLQRGDISRAGAYLSKLDEKNFSLEAST 1003

Query: 295  YNSLVNFSCKQGKY 308
             + L++   + G+Y
Sbjct: 1004 TSELISLFSR-GEY 1016


>gi|449493486|ref|XP_004159312.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 772

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 230/488 (47%), Gaps = 35/488 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D K  N+IL+       L+ A  +  +M +    P       ++    +  R+++A ++L
Sbjct: 179 DVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELL 238

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ +TYN++V GL K+G++  A  L++EM  SG      TYN ++      
Sbjct: 239 SEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQK 298

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G F +A    ++ + +   P L TY  L+  +CK   +        DM     +PDIV++
Sbjct: 299 GLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSF 358

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NSL+   C+ G   +A L+ + L  R + P  ITYNTL+H L   G  DA  ++   M +
Sbjct: 359 NSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD 418

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ--------------------- 394
               P +FTY IL+NG  K G V  A   FN+M+SK  +                     
Sbjct: 419 QGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSV 478

Query: 395 --------------PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                         PD++TYN  + ALC++G   EA  LL  +      P  +TY ++I+
Sbjct: 479 AFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIIN 538

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  K G + KA  ++ +M+  G++P  +T+  LI        ++ A     ++ ++    
Sbjct: 539 GFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPA 598

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  +I+GLC ++++D A +  + M      P+   ++ ++ +  + G  EEA +L+
Sbjct: 599 NVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLY 658

Query: 561 QKLIEWKV 568
           +++++ K+
Sbjct: 659 REMLDRKI 666



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 200/430 (46%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           + D M R   +PD   C  ++R L   + + KA  V  +M   G  P  +TYN M+   C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K G++  A+ LL EM   GC P+ +TYN ++  +   G+ +QA G  ++ L  G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY  LI   C++     A +++++M      P + TYN+L+   CK  +     L  +++
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L     P+ +++N+LL+     GC      + D +      PTV TYN LI+GLC +G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A+    +M  +   PDI TY  ++    K G ++ A    + +      P    YNT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I G  K      A  +  +M+  G  PD IT+   +   C+    EEA DLL+ +   G 
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
              +  Y  +I+G  K+  +  A +V   M+S    P    ++ ++   A   M + A+ 
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 559 LWQKLIEWKV 568
            + K++E  V
Sbjct: 587 YFSKMLEKSV 596



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 187/359 (52%), Gaps = 2/359 (0%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           + + D+M  +G  PDV   N ILR + D     +A   +    + G  P ++TY  +++ 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
            CK+  + +A+E+L +M   GC P+ VTYN LVN   K+G+ + A  +I  +L+ G+  +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 327 SITYNTLLHSLGSRGCW-DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           + TYN L++    +G + +A D + +++N  +  PT+ TYN L+ GLCK+  V      F
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF-PTLSTYNTLMYGLCKWVQVTGVRLRF 343

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           + M+     PDIV++N++L   C+ G ++EA  L   L      P +ITYNTLI GL   
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G ++ A+ L  +M + G+ PD  T+  L+ G  +   V  A     E+  +G K    AY
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              I G  K     +A  + E M+++ + PD   ++  V  +   G  EEA  L + ++
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 196/413 (47%), Gaps = 1/413 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC +G   +A  L++ M  R   P       L+ GL +  ++         M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + S   PD +++N ++ G C+ G I  A  L DE+      P VITYNT++  +   G  
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+   K+   +G  P + TYTIL+    K   ++ A    ++M  +G  PD   YN+ 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K      A  +   +L+ G  P+ ITYN  +H+L  +G ++    +L+ M     
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  +ING  K G + +A   FN+M+SK   P +VTY  ++ A   + ML+ A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               +   S    +ITYN +I+GL     M++A   + +M E GI P+  ++  LI   C
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
                EEA+ L +E+  R  +  +  + + +  L +  +V  A+Q +E +I +
Sbjct: 647 NMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQCVESLIQN 698



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 211/467 (45%), Gaps = 35/467 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L ++C  G++  A +L+  M  R   P+      L+ GL +   +E+A  +++ M
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM 276

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL--------- 229
           + SG      TYN ++ G C++G    A  L++EM      P + TYNT++         
Sbjct: 277 LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV 336

Query: 230 ---RTMFDN---GKFKQAIGFWKDQL----RKGC----------------PPYLITYTIL 263
              R  F +    KF   I  +   L    R GC                 P +ITY  L
Sbjct: 337 TGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTL 396

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I  +C    +  A+ +  +M  +G  PDI TY  LVN   K G    A    N +LS+G+
Sbjct: 397 IHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGL 456

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           +P+   YNT +              + + M  A   P V TYN+ ++ LC+ G  + A +
Sbjct: 457 KPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACD 516

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               MVS    PD VTY +++    K G L +A ++ + +     +P ++TY  LI   A
Sbjct: 517 LLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHA 576

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
            K  ++ A + + +M+E  +  + IT+  +I G C   +++EA     E+ ++G      
Sbjct: 577 AKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKF 636

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +Y ++I+  C     + A+++   M+  + +PD    S  +K +  D
Sbjct: 637 SYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRD 683



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 135/293 (46%)

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
           G    + V D M   G  PD+   N ++     +     A  V   +   G++P  +TYN
Sbjct: 160 GHVXCLLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYN 219

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           T+L S    G  D   ++L  M E    P   TYN+L+NGL K G +++A     +M++ 
Sbjct: 220 TMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNS 279

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
                  TYN ++   C++G+  EA  L+  +      P L TYNTL+ GL K   +   
Sbjct: 280 GLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGV 339

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
            + +  M+++  +PD ++  +L++G+CR   + EA  L  E+  R        Y  +IHG
Sbjct: 340 RLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHG 399

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           LC    +D A+++ + M      PD   ++ +V      G    A   + +++
Sbjct: 400 LCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEML 452



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 77/139 (55%)

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           N ++  L  +  + KA  +YG M + GI P  +T+ T++  +C+  +V++A++LL E+ +
Sbjct: 184 NRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQE 243

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           RG    +  Y ++++GL K  +++ A  ++E M++S        ++ ++      G+  E
Sbjct: 244 RGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVE 303

Query: 556 AYKLWQKLIEWKVFEKGTT 574
           A+ L ++++  + F   +T
Sbjct: 304 AFDLVEEMVNRRAFPTLST 322


>gi|297745184|emb|CBI39176.3| unnamed protein product [Vitis vinifera]
          Length = 996

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 128/452 (28%), Positives = 226/452 (50%), Gaps = 23/452 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++ +FC  G L  A K  D M R    P+      LI   ++  ++  A+++ 
Sbjct: 514 DVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKARKMSSANELF 573

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M+  G +P+ +TY  ++ G CK GQI  A  +   M  +   PDV  Y  I     D+
Sbjct: 574 EMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMYFKI-----DD 628

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  +               P + TY  L++ +CK   +  A ++LD M++EGC P+ + Y
Sbjct: 629 GNIRD--------------PNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVY 674

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  CK GK D+A +V   +  RG  PN  TY++L+  L      D   K+L  M E
Sbjct: 675 DALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            S +P V  Y  +I+GLCK G  D A    + M  K C P++VTY  ++    K G +++
Sbjct: 735 NSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDK 794

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            L+L+  +    C+P  +TY  LI+     G ++ A  L  +M +         +R +I 
Sbjct: 795 CLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIE 854

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS--SRY 533
           GF R   +  ++ LL EI +        AYR++I   CK+ ++++A+++ + M S  S  
Sbjct: 855 GFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSSCTSYS 912

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             D  ++S++++ ++     ++A++L+  +I+
Sbjct: 913 AADKDLYSSLIESLSLASKVDKAFELYADMIK 944



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 154/591 (26%), Positives = 256/591 (43%), Gaps = 54/591 (9%)

Query: 22  WCSRQVSLQH------------GVVNNHRT--QFYSQLRD-----LGAGRNVSLK--CRG 60
           W  RQ+   H            G   N R   QF  ++RD     LG   NV ++  CR 
Sbjct: 151 WAGRQIGYGHTGPVYHALLEVLGCGGNDRVPEQFLREIRDEDKEILGKLLNVLIRKCCRN 210

Query: 61  LPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSL---PSSDGPFVENDE 117
              NV ++ +  +   +   +   L  N  +R      +     L     SD  F   D 
Sbjct: 211 GLWNVALEELGRLK--DLGYKPSRLTYNALVRVFLEADRLDTAYLVHREMSDSGF-NMDG 267

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
            T    +   C  G+  +A  LI+   +     D      +I GL      E+A   L  
Sbjct: 268 YTLGCFVHLLCKAGRWREALALIE---KEEFKLDTVIYTQMISGLCEASLFEEAMDFLSR 324

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  S  +P+ +TY +++ G  ++ Q+     +L  M   GC P    +N+++     +G 
Sbjct: 325 MRSSSCIPNVVTYRILLCGCLRKRQLGRCKRILSMMITEGCYPSRRIFNSLIHAYCRSGD 384

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD-------DMAIEGCSP 290
           +  A    K     GC P  + Y ILI  +C    +  +++VL+       +M       
Sbjct: 385 YSYAYKLLKKMGDCGCQPGYVVYNILIGGICGNEKLP-SLDVLELAEKAYGEMLDAHVVL 443

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           + V  ++L    C  GK++ A  +I  ++S+G  P++ TY+ ++  L +    D    + 
Sbjct: 444 NKVNVSNLARCLCGAGKFEKAYSIIREMMSKGFIPDTSTYSKVIGLLCNASKVDNAFLLF 503

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           + M      P VFTY ILI+  CK GL+ +A   F++MV   C P++VTY  ++ A  K 
Sbjct: 504 EEMKSNHVVPDVFTYTILIDSFCKVGLLQQARKWFDEMVRDGCAPNVVTYTALIHAYLKA 563

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD--- 467
             ++ A +L  ++    C P ++TY  LIDG  K G +EKA  +Y +M  N   PD    
Sbjct: 564 RKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARMRGNADIPDVDMY 623

Query: 468 -------------ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
                         T+  L+ G C+A +V+EA DLL  +   G +  +  Y  +I G CK
Sbjct: 624 FKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCK 683

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             K+D A  V   M    Y P+   +S+++ ++  D   + A K+  +++E
Sbjct: 684 VGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLE 734



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 206/427 (48%), Gaps = 26/427 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +    K++ A++L ++M     IP+      LI G  +  +IEKA ++   M
Sbjct: 552 TYTALIHAYLKARKMSSANELFEMMLSEGCIPNVVTYTALIDGHCKSGQIEKACQIYARM 611

Query: 179 VMSGGVPDT----------------ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
             +  +PD                  TY  +V GLCK  +++ A  LLD MSV GCEP+ 
Sbjct: 612 RGNADIPDVDMYFKIDDGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNH 671

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           I Y+ ++      GK  +A   +     +G  P + TY+ LI+++ K   +  A++VL  
Sbjct: 672 IVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSR 731

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M    C+P+++ Y  +++  CK GK D+A  +++ +  +G  PN +TY  ++   G  G 
Sbjct: 732 MLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAG- 790

Query: 343 WDAVDKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
              VDK L++M +      +P   TY +LIN  C  GL+D A    ++M        +  
Sbjct: 791 --KVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAG 848

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  V+    +E ++  +L LL  +  +   P +  Y  LID   K G +E A+ L+ +M 
Sbjct: 849 YRKVIEGFNREFII--SLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMS 906

Query: 460 E--NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
              +  + D   + +LI     A +V++A +L  ++ KRG     S +  ++ GL +  +
Sbjct: 907 SCTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINR 966

Query: 518 VDMAIQV 524
            + A+Q+
Sbjct: 967 WEEALQL 973



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 92/381 (24%), Positives = 166/381 (43%), Gaps = 35/381 (9%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG   + +  T   ++   C   K+ +A  L+D+M+     P+      LI G  ++ ++
Sbjct: 628 DGNIRDPNIFTYGALVDGLCKAHKVKEARDLLDVMSVEGCEPNHIVYDALIDGFCKVGKL 687

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           ++A  V   M   G  P+  TY+ ++  L K  ++  A+ +L  M  + C P+VI Y  +
Sbjct: 688 DEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALKVLSRMLENSCAPNVIIYTEM 747

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +   GK  +A         KGC P ++TYT +I+   K   + + +E++  M  +GC
Sbjct: 748 IDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFGKAGKVDKCLELMRQMGAKGC 807

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P+ VTY  L+N  C  G  DDA  +++ +       +   Y  ++        +     
Sbjct: 808 APNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMAGYRKVIEGFNRE--FIISLG 865

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +LD + E    P +  Y ILI+  CK G ++ A+    +M S        +Y+     L 
Sbjct: 866 LLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSS------CTSYSAADKDL- 918

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
                                     Y++LI+ L+    ++KA  LY  M++ G  P+  
Sbjct: 919 --------------------------YSSLIESLSLASKVDKAFELYADMIKRGGIPELS 952

Query: 469 THRTLIWGFCRADQVEEAVDL 489
               L+ G  R ++ EEA+ L
Sbjct: 953 IFFYLVKGLIRINRWEEALQL 973



 Score = 87.0 bits (214), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 119/315 (37%), Gaps = 70/315 (22%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +    + ++  FC  GKL +A  +   M+ R   P+ +   +LI  L +  R++ A K
Sbjct: 668 EPNHIVYDALIDGFCKVGKLDEAQMVFTKMSERGYGPNVYTYSSLIDRLFKDKRLDLALK 727

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL  M+ +   P+ I Y  M+ GLCK G+   A  L+  M   GC P+V+TY  ++    
Sbjct: 728 VLSRMLENSCAPNVIIYTEMIDGLCKVGKTDEAYRLMSMMEEKGCHPNVVTYTAMIDGFG 787

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM---------- 283
             GK  + +   +    KGC P  +TY +LI   C    +  A ++LD+M          
Sbjct: 788 KAGKVDKCLELMRQMGAKGCAPNFVTYRVLINHCCAAGLLDDAHQLLDEMKQTYWPKHMA 847

Query: 284 ----AIEGCS-------------------PDIVTYNSLVNFSCKQG-------------- 306
                IEG +                   P I  Y  L++  CK G              
Sbjct: 848 GYRKVIEGFNREFIISLGLLDEIAENVAVPIIPAYRILIDSFCKAGRLELALELHKEMSS 907

Query: 307 -----------------------KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
                                  K D A  +  +++ RG  P    +  L+  L     W
Sbjct: 908 CTSYSAADKDLYSSLIESLSLASKVDKAFELYADMIKRGGIPELSIFFYLVKGLIRINRW 967

Query: 344 DAVDKILDIMNEASH 358
           +   ++ D + +  H
Sbjct: 968 EEALQLSDCICQMVH 982


>gi|115461911|ref|NP_001054555.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|52353663|gb|AAU44229.1| hypothetical protein [Oryza sativa Japonica Group]
 gi|113578106|dbj|BAF16469.1| Os05g0132000 [Oryza sativa Japonica Group]
 gi|125550727|gb|EAY96436.1| hypothetical protein OsI_18334 [Oryza sativa Indica Group]
          Length = 637

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 137/486 (28%), Positives = 235/486 (48%), Gaps = 36/486 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T N +++  C   ++  A K++D M+R+   PD      ++ G+ ++ R+E+A 
Sbjct: 153 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 212

Query: 173 ------------------------------KVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
                                          V+  MV  G  P+ +TY  +V   CK  +
Sbjct: 213 GFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARE 272

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +R A A+L  M   GC P+V+T+  +++  F++GK   A+  W   + +G  P  I+Y +
Sbjct: 273 LRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNV 332

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI  +C    +  A++  + M      P+  TY++LV+     G  D A+L+ N + S G
Sbjct: 333 LIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSG 392

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +PN + Y  ++  L  +  +D  + ++D M   +  P   T+N LI  LC  G V RA+
Sbjct: 393 CKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRAL 452

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL--HLLNGSSCSPCLITYNTLID 440
           N F+ M    C P+  TYN +L  L +EG   +A  ++   L NG   S  L+TYNT+I+
Sbjct: 453 NVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELS--LVTYNTVIN 510

Query: 441 GLAKKGCMEK-AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
            L +  CM K AM+L G+MM  GI PD  T   +I  +C+  +V  A  LL ++      
Sbjct: 511 CLCQM-CMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCP 569

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
               AY ++I  LC   K+  A+  L  M+     P++  ++ +V+ +  +  T     L
Sbjct: 570 RNVVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHL 629

Query: 560 WQKLIE 565
           ++ ++E
Sbjct: 630 FKYIVE 635



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 211/425 (49%), Gaps = 30/425 (7%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +L+  L+R + +     V   M  +G  P+  TYN+++  LC+  ++ +A  +LDEMS  
Sbjct: 127 HLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRK 186

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGF------------------------WK------ 246
           GC PD +++ TI+  M   G+ ++A GF                        W+      
Sbjct: 187 GCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVN 246

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           + +++G  P ++TYT +++  CK   +  A  +L  M   GC+P+++T+ +LV    + G
Sbjct: 247 EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDG 306

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K  DA+ + + ++  G  P++I+YN L+  L   G         + M   +  P   TY+
Sbjct: 307 KVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYS 366

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L++G    G +D A+  +N+M S  C+P++V Y  ++  LCK+ M ++A  L+  +   
Sbjct: 367 TLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD 426

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           +C P  +T+NTLI  L   G + +A+ ++  M  NG  P+D T+  L+ G  R    ++A
Sbjct: 427 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 486

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             ++ E+   G ++    Y  VI+ LC+      A+ +L  M+    +PD   F+ I+  
Sbjct: 487 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 546

Query: 547 VADDG 551
              +G
Sbjct: 547 YCKEG 551



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 192/407 (47%), Gaps = 8/407 (1%)

Query: 159 IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
           +R L     ++     LQ M + G           +G   + G    A+      S  GC
Sbjct: 58  VRRLAAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGC 117

Query: 219 -EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P V  YN +L  +         +  + +  + G  P + TY +LI  +C+   +  A 
Sbjct: 118 RDPGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAAR 177

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++LD+M+ +GC PD V++ ++V+  CK G+ ++A       L+  + P   +YN ++H+L
Sbjct: 178 KMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA----RGFLAETV-PVQASYNAVVHAL 232

Query: 338 -GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
            G    W+ V  +++ M +    P V TY  +++  CK   +  A     +MVS  C P+
Sbjct: 233 CGEFRMWE-VFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPN 291

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           ++T+  ++    ++G +++AL + H +     +P  I+YN LI GL   G ++ A+  + 
Sbjct: 292 VLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFN 351

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M  N + P+  T+ TL+ GF  A  ++ A+ +  E+   G K     Y  +I  LCK  
Sbjct: 352 SMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKM 411

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             D A  +++ M+     P+   F+T++ ++ D G    A  ++  +
Sbjct: 412 MFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGM 458


>gi|222639781|gb|EEE67913.1| hypothetical protein OsJ_25766 [Oryza sativa Japonica Group]
          Length = 625

 Score =  210 bits (535), Expect = 1e-51,   Method: Compositional matrix adjust.
 Identities = 127/430 (29%), Positives = 214/430 (49%), Gaps = 6/430 (1%)

Query: 140 IDIMARRNQ----IPDFHFCINLIRGLIRIDRIEKASKVLQIMV-MSGGVP-DTITYNMM 193
           +DI+ RR       PD      L++GL      ++A  +L IM    G  P D + Y  +
Sbjct: 155 MDIVLRRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTV 214

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
           + GL + GQ+  A +L D M   G  PDV+TY++I+  +       +A   +   ++ G 
Sbjct: 215 INGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGV 274

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
            P  I YT L+   C       AI +   M   G  PD+VTY +L+++ CK GK  +A  
Sbjct: 275 MPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARK 334

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           + ++L+ RG +P+S TY TLLH   + G    +  +LD+M +         +N+++    
Sbjct: 335 IFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYA 394

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K+  VD A+  F+ M  +   PDIV Y TVL  LC  G +++AL   + L     +P ++
Sbjct: 395 KHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIV 454

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            + TLI GL      +K   L  +M++ GI  D I    ++   C+  +V EA +L   +
Sbjct: 455 VFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDLM 514

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            + G +   + Y  +I G C   K+D A+++L +M+ +  KP D  ++TI+   + +G  
Sbjct: 515 VRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGRI 574

Query: 554 EEAYKLWQKL 563
           E+   L +++
Sbjct: 575 EDGLTLLREM 584



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 118/407 (28%), Positives = 204/407 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++      G+L  A  L D M  R   PD     ++I  L +   ++KA++V   MV +G
Sbjct: 214 VINGLLREGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNG 273

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD I Y  +V G C  G+ + AI +  +M   G EPDV+TY  ++  +  NGK  +A 
Sbjct: 274 VMPDCIMYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEAR 333

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +   +++G  P   TY  L+     +  +    ++LD M  +G       +N ++   
Sbjct: 334 KIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAY 393

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K  K D+A+LV +N+  +G+ P+ + Y T+L  L + G  D      + +     +P +
Sbjct: 394 AKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNI 453

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             +  LI+GLC     D+      +M+ +    D + +N ++G LCK+G + EA  L  L
Sbjct: 454 VVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDTIFFNAIMGNLCKKGRVIEAKNLFDL 513

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   TYNTLIDG    G M++AM L G M+ NG+ P D+T+ T+I G+ +  +
Sbjct: 514 MVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGVMVFNGVKPSDVTYNTIINGYSQNGR 573

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +E+ + LL+E+  +G       Y +++ GL ++ +   A ++   MI
Sbjct: 574 IEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGRTVAAKELYLRMI 620



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 104/420 (24%), Positives = 193/420 (45%), Gaps = 14/420 (3%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM-----SGGVPDTIT 189
           DA ++ D + +R    D     +L R L  + R   A  +     M     +   P+  T
Sbjct: 45  DAHQVFDRLLKRG---DRASIFDLNRALSDVARASPAVAISLFNRMPRAGATSAAPNIAT 101

Query: 190 YNMMVGGLCKR-GQIRSAIALLDEMSVSGC--EPDVITYNTILRTMFDNGKFKQAIGFWK 246
           Y +++G  C+R G++  A A +  +  +G   EP+ +  ++        G+  +     +
Sbjct: 102 YGIVIG-CCRRLGRLDLAFATVGRVITTGLRHEPNPLQSSSQGPLCTAGGRAMRMDIVLR 160

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFSCK 304
                GC P L +YTIL++ +C      +A+++L  MA     C  D+V Y +++N   +
Sbjct: 161 RMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLLR 220

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           +G+ D A  + + +L RG  P+ +TY++++ +L      D   ++   M +    P    
Sbjct: 221 EGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCIM 280

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y  L++G C  G    AI  F +M     +PD+VTY  ++  LCK G   EA ++   L 
Sbjct: 281 YTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSLV 340

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P   TY TL+ G A +G + +   L   MM+ G+         ++  + + ++V+
Sbjct: 341 KRGHKPDSTTYGTLLHGYATEGALVEMHDLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVD 400

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA+ +   + ++G       Y  V+  LC + +VD A+     + S    P+  VF+T++
Sbjct: 401 EALLVFSNMRQQGLNPDIVNYGTVLDILCTAGRVDDALSQFNSLKSEGLAPNIVVFTTLI 460



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 82/307 (26%), Positives = 143/307 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T   ++   C  GK T+A K+ D + +R   PD      L+ G      + +  
Sbjct: 309 VEPDVVTYTALMDYLCKNGKSTEARKIFDSLVKRGHKPDSTTYGTLLHGYATEGALVEMH 368

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L +M+  G       +NM++G   K  ++  A+ +   M   G  PD++ Y T+L  +
Sbjct: 369 DLLDLMMKKGMQLGHHIFNMIMGAYAKHNKVDEALLVFSNMRQQGLNPDIVNYGTVLDIL 428

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A+  +     +G  P ++ +T LI  +C      +  E+  +M   G   D 
Sbjct: 429 CTAGRVDDALSQFNSLKSEGLAPNIVVFTTLIHGLCTCDKWDKVEELAFEMIDRGICLDT 488

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + +N+++   CK+G+  +A  + + ++  G+EPN+ TYNTL+      G  D   K+L +
Sbjct: 489 IFFNAIMGNLCKKGRVIEAKNLFDLMVRIGIEPNTNTYNTLIDGYCLDGKMDEAMKLLGV 548

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P+  TYN +ING  + G ++  +    +M  K   P IVTY  +L  L + G 
Sbjct: 549 MVFNGVKPSDVTYNTIINGYSQNGRIEDGLTLLREMDGKGVNPGIVTYEMLLQGLFQAGR 608

Query: 413 LNEALQL 419
              A +L
Sbjct: 609 TVAAKEL 615



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/302 (23%), Positives = 135/302 (44%), Gaps = 48/302 (15%)

Query: 274 ARAIEVLDDMAIEGC---SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM--EPNSI 328
           A AI + + M   G    +P+I TY  ++    + G+ D A   +  +++ G+  EPN  
Sbjct: 78  AVAISLFNRMPRAGATSAAPNIATYGIVIGCCRRLGRLDLAFATVGRVITTGLRHEPNP- 136

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS---F 385
                                   +  +S  P           LC  G   RA+      
Sbjct: 137 ------------------------LQSSSQGP-----------LCTAG--GRAMRMDIVL 159

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLIDGLA 443
            +M    C+PD+ +Y  +L  LC +    +AL LLH++  +   C   ++ Y T+I+GL 
Sbjct: 160 RRMPELGCKPDLFSYTILLKGLCDDKTSQQALDLLHIMADHKGRCPLDVVAYTTVINGLL 219

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           ++G ++KA  L+  M++ G SPD +T+ ++I    +   +++A  +   + K G      
Sbjct: 220 REGQLDKAYSLFDAMLDRGPSPDVVTYSSIISALSKTQAMDKATQVFTRMVKNGVMPDCI 279

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  ++HG C S K   AI + + M     +PD   ++ ++  +  +G + EA K++  L
Sbjct: 280 MYTSLVHGYCSSGKPKEAIGIFKKMCRHGVEPDVVTYTALMDYLCKNGKSTEARKIFDSL 339

Query: 564 IE 565
           ++
Sbjct: 340 VK 341


>gi|297837161|ref|XP_002886462.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297332303|gb|EFH62721.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 550

 Score =  210 bits (535), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 222/435 (51%), Gaps = 6/435 (1%)

Query: 132 KLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           KL DA  L   M +    P   DF+  ++ I  + + D +    K ++++   G   D  
Sbjct: 65  KLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVL---GIRNDLY 121

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T+N+++   C   Q+  A+++L +M   G EPD +T  +++       +   A+      
Sbjct: 122 TFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  G  P ++ Y  +I+ +CK   +  A++   ++  +G  P++VTY +LVN  C  G++
Sbjct: 182 VEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGRW 241

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           +DA  ++ +++ R + PN ITY+ LL +    G      +I + M   S  P + TY+ L
Sbjct: 242 NDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSSL 301

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           INGLC +  +D A   F+ MVSK C PD+V+YNT++   CK   + + ++L   ++    
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRGL 361

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
               +TYNTLI G  + G ++KA   + QM   G+SPD  T+  L+ G C    +E+A+ 
Sbjct: 362 VNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKALV 421

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           + +++ K    +    Y  VI G+CK+ KV+ A  +   +     KPD   ++T++  + 
Sbjct: 422 IFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 549 DDGMTEEAYKLWQKL 563
             G+  E   L+ K+
Sbjct: 482 TKGLQHEVEALYTKM 496



 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 115/354 (32%), Positives = 182/354 (51%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   ++  FC R +++DA  L+D M      PD      +I  L +  R+  A  
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALD 211

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
             + +   G  P+ +TY  +V GLC  G+   A  LL +M      P+VITY+ +L    
Sbjct: 212 FFKEIGRKGIRPNVVTYTALVNGLCNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFV 271

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            NGK  +A   +++ +R    P ++TY+ LI  +C    I  A ++ D M  +GC PD+V
Sbjct: 272 KNGKVLEAKEIFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVV 331

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN+L+N  CK  + +D + +   +  RG+  N++TYNTL+      G  D   +    M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFRKMSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQM 391

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +    SP ++TYNIL+ GLC  GL+++A+  F  M       DIVTY TV+  +CK G +
Sbjct: 392 DSFGVSPDIWTYNILLGGLCDNGLLEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKV 451

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +A  L   L+     P ++TY T++ GL  KG   +   LY +M + G+  +D
Sbjct: 452 EDAWGLFCSLSLKGLKPDIVTYTTMMSGLCTKGLQHEVEALYTKMKQEGLMKND 505



 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 121/423 (28%), Positives = 216/423 (51%), Gaps = 6/423 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + ND  T N ++  FC   +++ A  ++  M +    PD     +L+ G  R +R+  A 
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PD + YN ++  LCK  ++  A+    E+   G  P+V+TY  ++  +
Sbjct: 176 SLVDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGL 235

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            ++G++  A    +D +++   P +ITY+ L++   K   +  A E+ ++M      PDI
Sbjct: 236 CNSGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDI 295

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY+SL+N  C   + D+A  + + ++S+G  P+ ++YNTL++        +   K+   
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRK 355

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M++        TYN LI G  + G VD+A   F+QM S    PDI TYN +LG LC  G+
Sbjct: 356 MSQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGL 415

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L +AL +   +  S     ++TY T+I G+ K G +E A  L+  +   G+ PD +T+ T
Sbjct: 416 LEKALVIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSLSLKGLKPDIVTYTT 475

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++ G C      E   L  ++ + G  M+N +   +  G      + ++ ++++ M+S  
Sbjct: 476 MMSGLCTKGLQHEVEALYTKMKQEG-LMKNDSMLCLGDG-----DITISAELIKKMLSCG 529

Query: 533 YKP 535
           Y P
Sbjct: 530 YAP 532



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 206/401 (51%)

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
           +R  ++  A  + + MV +   P  + +N ++  + K  +    I+L  +M V G   D+
Sbjct: 61  LRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIRNDL 120

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            T+N ++       +   A+      L+ G  P  +T   L+   C++  ++ A+ ++D 
Sbjct: 121 YTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G  PDIV YN++++  CK  + +DA+     +  +G+ PN +TY  L++ L + G 
Sbjct: 181 MVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCNSGR 240

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           W+   ++L  M +   +P V TY+ L++   K G V  A   F +MV  +  PDIVTY++
Sbjct: 241 WNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVTYSS 300

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LC    ++EA Q+  L+    C P +++YNTLI+G  K   +E  M L+ +M + G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKMSQRG 360

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +  + +T+ TLI GF +   V++A +   ++   G       Y +++ GLC +  ++ A+
Sbjct: 361 LVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGVSPDIWTYNILLGGLCDNGLLEKAL 420

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            + E M  S    D   ++T+++ +   G  E+A+ L+  L
Sbjct: 421 VIFEDMQKSEMDLDIVTYTTVIQGMCKTGKVEDAWGLFCSL 461



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 175/340 (51%), Gaps = 2/340 (0%)

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           +T   + K   AI  +++ ++    P ++ +  L+  + K       I +   M + G  
Sbjct: 58  KTRLRDIKLHDAINLFREMVKTRPFPSIVDFNRLLSAIVKMKKYDVVISLGKKMEVLGIR 117

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            D+ T+N ++N  C   +   A+ V+  +L  G EP+ +T  +L++    R        +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSVLGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           +D M E  + P +  YN +I+ LCK   V+ A++ F ++  K  +P++VTY  ++  LC 
Sbjct: 178 VDKMVEIGYRPDIVAYNAIIDSLCKTRRVNDALDFFKEIGRKGIRPNVVTYTALVNGLCN 237

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G  N+A +LL  +     +P +ITY+ L+D   K G + +A  ++ +M+   I PD +T
Sbjct: 238 SGRWNDAARLLRDMIKRKITPNVITYSALLDAFVKNGKVLEAKEIFEEMVRMSIDPDIVT 297

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +LI G C  D+++EA  +   +  +G      +Y  +I+G CK+K+V+  +++   M 
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCFPDVVSYNTLINGFCKAKRVEDGMKLFRKM- 356

Query: 530 SSRYKPDDTV-FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           S R   ++TV ++T+++     G  ++A + + ++  + V
Sbjct: 357 SQRGLVNNTVTYNTLIQGFFQVGDVDKAQEFFSQMDSFGV 396


>gi|413944227|gb|AFW76876.1| hypothetical protein ZEAMMB73_037126 [Zea mays]
          Length = 595

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/455 (27%), Positives = 230/455 (50%), Gaps = 12/455 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +K+++ F S  +   A  L D +A     PD     +L+  L R   +   +++   M  
Sbjct: 102 SKLVRRFSSPAEA--AGFLRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRD 159

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE--PDVITYNTILRTMFDNGKF 238
           +   PD +TY +++ GLCK G +  A+ +LD MS  G +  PD+   NT++  +   G+ 
Sbjct: 160 ASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRL 219

Query: 239 KQAIGFWKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +QAI F  +++R   GC P  +TY  L +  C+   I  A +++  M  EG +P+++T N
Sbjct: 220 QQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMN 279

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEP----NSITYNTLLHSLGSRGCWDAVDKILDI 352
           +++   C+ G+   A+        R + P    N++TY+TL  +       D   ++   
Sbjct: 280 TIIGGLCRVGRVGAALEFFRE--KRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHE 337

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +  H P    Y  +I+GL + G +  A  +   M     + D   YN ++G  C++  
Sbjct: 338 MADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKK 397

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EA +LL  + G    P + TYNTL+ GL K G       L G M+++G  P  +T  T
Sbjct: 398 LHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGT 457

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G+C+A + +EA+ + + + +   +     Y  +I  LCKS++VD+AI++ + M    
Sbjct: 458 LVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKN 517

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
              + T ++ ++K + D  M E+A++L  ++ E +
Sbjct: 518 VPANVTTYNALLKGLQDKKMAEKAFELMDRMREER 552



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 101/366 (27%), Positives = 173/366 (47%), Gaps = 6/366 (1%)

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           L D ++     PD+  +N++L  +   G  +     +         P ++TY IL+  +C
Sbjct: 118 LRDSLASGAPAPDISIFNSLLTALGRAGNLRGMTELFTSMRDASVKPDVVTYGILLNGLC 177

Query: 269 KQCGIARAIEVLDDMAIEGCS--PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR--GME 324
           K   +  A++VLD M+  G    PDI   N++V+  CK G+   A++ ++  +    G  
Sbjct: 178 KSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQAIIFVDERMRHVHGCA 237

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN++TYN L  +    G      KI+  M +   +P V T N +I GLC+ G V  A+  
Sbjct: 238 PNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTIIGGLCRVGRVGAALEF 297

Query: 385 FNQ--MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           F +   V    + + VTY+T+  A      ++ A++L H +      P  + Y T+I GL
Sbjct: 298 FREKRTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGL 357

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            + G +  A      M + G   D   +  LI GFCR  ++ EA +LL+E+   G +   
Sbjct: 358 TQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDV 417

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  ++ GLCK+       ++L  MI    +P    F T+V      G T+EA ++++ 
Sbjct: 418 YTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRS 477

Query: 563 LIEWKV 568
           + E ++
Sbjct: 478 MDEARI 483



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 115/432 (26%), Positives = 195/432 (45%), Gaps = 43/432 (9%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMAR--RNQIPDFHFCINLIRGLIRIDRIEK 170
           V+ D  T   +L   C  G + DA K++D M+    +  PD      ++ GL +I R+++
Sbjct: 162 VKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDIAILNTVVDGLCKIGRLQQ 221

Query: 171 ASKVL--QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           A   +  ++  + G  P+ +TYN +    C+ G I  A  ++  M   G  P+VIT NTI
Sbjct: 222 AIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKIVARMEKEGVAPNVITMNTI 281

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPY---LITYTILIEQVCKQCGIARAIEVLDDMAI 285
           +  +   G+   A+ F++++ R   P      +TY+ L         +  A+E+  +MA 
Sbjct: 282 IGGLCRVGRVGAALEFFREK-RTVWPEARGNAVTYSTLASAFLHCNNVDMAMELFHEMAD 340

Query: 286 EGCSPDIV-----------------------------------TYNSLVNFSCKQGKYDD 310
            G  PD V                                    YN L+   C++ K  +
Sbjct: 341 HGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHE 400

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  ++  +   G++P+  TYNTLL  L   G + AVD++L  M +    P+V T+  L++
Sbjct: 401 AYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVH 460

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G CK G  D A+  F  M     QP+ V YNT++  LCK   ++ A++L   +   +   
Sbjct: 461 GYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPA 520

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            + TYN L+ GL  K   EKA  L  +M E   +P+ +T   L+       + E     +
Sbjct: 521 NVTTYNALLKGLQDKKMAEKAFELMDRMREERCTPNYVTVDVLMEWLPEIGETERLKCFM 580

Query: 491 KEIGKRGNKMRN 502
           ++  ++ N +R 
Sbjct: 581 QQRDQKDNHVRG 592



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 116/445 (26%), Positives = 200/445 (44%), Gaps = 20/445 (4%)

Query: 143 MARRNQIPDFHFCI--NLIRGLIRIDRIEKASKVLQIMVMSGG-VPDTITYNMMVGGLCK 199
           +A R++IP     +   L+R   R     +A+  L+  + SG   PD   +N ++  L +
Sbjct: 87  LAARHRIPPPSALLLSKLVR---RFSSPAEAAGFLRDSLASGAPAPDISIFNSLLTALGR 143

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG---CPPY 256
            G +R    L   M  +  +PDV+TY  +L  +  +G    A+         G   CP  
Sbjct: 144 AGNLRGMTELFTSMRDASVKPDVVTYGILLNGLCKSGHVGDALKVLDRMSSPGSDVCPDI 203

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMA--IEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
            I  T+ ++ +CK   + +AI  +D+    + GC+P+ VTYN L +  C+ G    A  +
Sbjct: 204 AILNTV-VDGLCKIGRLQQAIIFVDERMRHVHGCAPNAVTYNCLADAFCRVGDIGMACKI 262

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE-----ASHSPTVFTYNILI 369
           +  +   G+ PN IT NT++  L   G    V   L+   E             TY+ L 
Sbjct: 263 VARMEKEGVAPNVITMNTIIGGLCRVG---RVGAALEFFREKRTVWPEARGNAVTYSTLA 319

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +       VD A+  F++M     +PD V Y T++  L + G L +A      +  +   
Sbjct: 320 SAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLDACTTAASMKKAGFK 379

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
                YN LI G  +K  + +A  L  +M   G+ PD  T+ TL+ G C+A       +L
Sbjct: 380 LDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLSGLCKAGDFSAVDEL 439

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L  +   G +     +  ++HG CK+ K D A+++   M  +R +P+  +++T++  +  
Sbjct: 440 LGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQPNTVIYNTLIDFLCK 499

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTT 574
               + A KL+ ++ E  V    TT
Sbjct: 500 SREVDVAIKLFDEMREKNVPANVTT 524



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 73/270 (27%), Positives = 122/270 (45%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           P    +  T + +   F     +  A +L   MA     PD      +I GL +  R+  
Sbjct: 306 PEARGNAVTYSTLASAFLHCNNVDMAMELFHEMADHGHRPDAVMYFTMISGLTQAGRLLD 365

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A      M  +G   D   YN+++GG C++ ++  A  LL+EM   G +PDV TYNT+L 
Sbjct: 366 ACTTAASMKKAGFKLDAKAYNILIGGFCRKKKLHEAYELLEEMKGVGLQPDVYTYNTLLS 425

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +   G F          +  GC P ++T+  L+   CK      A+ +   M      P
Sbjct: 426 GLCKAGDFSAVDELLGHMIDDGCQPSVVTFGTLVHGYCKAGKTDEALRIFRSMDEARIQP 485

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           + V YN+L++F CK  + D A+ + + +  + +  N  TYN LL  L  +   +   +++
Sbjct: 486 NTVIYNTLIDFLCKSREVDVAIKLFDEMREKNVPANVTTYNALLKGLQDKKMAEKAFELM 545

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           D M E   +P   T ++L+  L + G  +R
Sbjct: 546 DRMREERCTPNYVTVDVLMEWLPEIGETER 575


>gi|302770561|ref|XP_002968699.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
 gi|300163204|gb|EFJ29815.1| hypothetical protein SELMODRAFT_61973 [Selaginella moellendorffii]
          Length = 544

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/454 (29%), Positives = 238/454 (52%), Gaps = 17/454 (3%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDA-SKLIDIMARRNQIPDFHFCINLIRGLI----R 164
           GPF+     ++N +L+ F   G++ DA + L D+    + +    + + +++GL      
Sbjct: 96  GPFLPTS-ASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNL-VLKGLCWENKS 153

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
            +R+E+A +  + M  SG  PD  +Y++++  L   G++  A AL   M+   C PD++T
Sbjct: 154 ANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CSPDIMT 210

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN ++      G+  +A    K+ L+ G  P + TY+I+I   CK   +  A EV   M 
Sbjct: 211 YNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMI 270

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR--GC 342
              C P+ VT+N+L+   CK G  +DA+ +   +   G +   +TYNTL+ SL  +  G 
Sbjct: 271 ESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGV 330

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           + AVD + + +  A  +PT+ TYN LI G C    +  A+  F++M  K C P+++TY+ 
Sbjct: 331 YTAVD-LFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEMEGK-CAPNVITYSI 388

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LCK   + EA + L  +     +P ++TY  LI+G  K G ++ A++ + +M   G
Sbjct: 389 LIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGELKSALLFFEKMKLAG 448

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
            +P+ +   TLI G C+A++  + + LL  +   G K     Y  +I GLC + +V+ A 
Sbjct: 449 CAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCLISGLCSANRVEDAQ 508

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           ++ + M  +   P+ T F+ +++ +      EEA
Sbjct: 509 RLFDGMACA---PNVTTFNFLIRGLCAQKKVEEA 539



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 224/450 (49%), Gaps = 9/450 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +  T N +L   C  G+++ A KL   M     +P       L+RG     R+  A   L
Sbjct: 66  NASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHL 125

Query: 176 QIMVMSGGVPDTITYNMMVGGLC----KRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           Q M  S     T TYN+++ GLC       ++  A+    EM  SG EPD+ +Y+ +L  
Sbjct: 126 QDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSA 185

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           + D+G+  +A   +       C P ++TY +L++  CK      A  ++ ++   G  P+
Sbjct: 186 LSDSGRMAEAHALFSAMT---CSPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPN 242

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           + TY+ ++N  CK  K ++A  V   ++     PN++T+NTL+      G  +   K+  
Sbjct: 243 VFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFA 302

Query: 352 IMNEASHSPTVFTYNILINGLCK-YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
            M +     T+ TYN LI+ LCK  G V  A++ FN++      P IVTYN+++   C  
Sbjct: 303 EMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDA 362

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             L+EA+Q    + G  C+P +ITY+ LIDGL K   M++A      M  +G +P  +T+
Sbjct: 363 RRLSEAMQYFDEMEGK-CAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTY 421

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             LI GFC+  +++ A+   +++   G       +  +I GLCK+++ +  +++L  M +
Sbjct: 422 GGLINGFCKCGELKSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHA 481

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              KPD   ++ ++  +      E+A +L+
Sbjct: 482 EGCKPDVITYNCLISGLCSANRVEDAQRLF 511



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 223/449 (49%), Gaps = 11/449 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L    S  K   A +L   +      P+ H    LIRG  +  ++ +A  V   M  
Sbjct: 1   NALLSGLVSARKHDQALRLFKEVLAGLFAPNAHTYNVLIRGFCKGGQMHQAVSVFSDMKS 60

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           SG +P+  T N ++ GLC+ GQ+ SA+ L  EM      P   ++N +LR  F  G+ + 
Sbjct: 61  SGLLPNASTMNTLLLGLCEIGQMSSALKLFREMQAGPFLPTSASHNILLRGFFMAGRVRD 120

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA----RAIEVLDDMAIEGCSPDIVTYN 296
           A+   +D  +        TY ++++ +C +   A    +A+E   +M   G  PD+ +Y+
Sbjct: 121 ALAHLQDMRKSSSSVATGTYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYH 180

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L++     G+  +A  + + +      P+ +TYN L+      G       ++  + +A
Sbjct: 181 ILLSALSDSGRMAEAHALFSAMTC---SPDIMTYNVLMDGYCKIGQTYEAQSLMKEILKA 237

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            + P VFTY+I+IN  CK   V+ A   F +M+  NC P+ VT+NT++   CK GML +A
Sbjct: 238 GYEPNVFTYSIIINCYCKLDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDA 297

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKK-GCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           ++L   +    C   ++TYNTLID L KK G +  A+ L+ ++   G++P  +T+ +LI 
Sbjct: 298 IKLFAEMEKIGCKATIVTYNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQ 357

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
           GFC A ++ EA+    E+   G    N   Y ++I GLCK +++  A + LE M +  Y 
Sbjct: 358 GFCDARRLSEAMQYFDEM--EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYT 415

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           P    +  ++      G  + A   ++K+
Sbjct: 416 PTVVTYGGLINGFCKCGELKSALLFFEKM 444



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 131/413 (31%), Positives = 196/413 (47%), Gaps = 12/413 (2%)

Query: 119 TNNKILQNFC----SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           T N +L+  C    S  +L  A +    M      PD      L+  L    R+ +A  +
Sbjct: 139 TYNLVLKGLCWENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHAL 198

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              M  S   PD +TYN+++ G CK GQ   A +L+ E+  +G EP+V TY+ I+     
Sbjct: 199 FSAMTCS---PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCK 255

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             K ++A   +   +   C P  +T+  LI   CK   +  AI++  +M   GC   IVT
Sbjct: 256 LDKVEEAWEVFMKMIESNCVPNAVTFNTLIAGFCKAGMLEDAIKLFAEMEKIGCKATIVT 315

Query: 295 YNSLVNFSCKQ-GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           YN+L++  CK+ G    AV + N L   G+ P  +TYN+L+             +  D M
Sbjct: 316 YNTLIDSLCKKRGGVYTAVDLFNKLEGAGLTPTIVTYNSLIQGFCDARRLSEAMQYFDEM 375

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E   +P V TY+ILI+GLCK   +  A  +   M +    P +VTY  ++   CK G L
Sbjct: 376 -EGKCAPNVITYSILIDGLCKVRRMKEAAKTLEDMKAHGYTPTVVTYGGLINGFCKCGEL 434

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             AL     +  + C+P  + +NTLIDGL K       + L   M   G  PD IT+  L
Sbjct: 435 KSALLFFEKMKLAGCAPNTVIFNTLIDGLCKAERANDGLRLLCHMHAEGCKPDVITYNCL 494

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           I G C A++VE+A  L   +    N    + +  +I GLC  KKV+ A  +L+
Sbjct: 495 ISGLCSANRVEDAQRLFDGMACAPNV---TTFNFLIRGLCAQKKVEEARNILD 544



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 83/281 (29%), Positives = 124/281 (44%), Gaps = 42/281 (14%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P+  TYN L+   CK G+   AV V +++ S G+ PN+ T NTLL  L   G   +  K
Sbjct: 29  APNAHTYNVLIRGFCKGGQMHQAVSVFSDMKSSGLLPNASTMNTLLLGLCEIGQMSSALK 88

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M      PT  ++NIL+ G    G V  A+     M   +      TYN VL  LC
Sbjct: 89  LFREMQAGPFLPTSASHNILLRGFFMAGRVRDALAHLQDMRKSSSSVATGTYNLVLKGLC 148

Query: 409 KEG----MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            E      L +A++    +  S   P L +Y+ L+  L+  G M +A  L+  M     S
Sbjct: 149 WENKSANRLEQAMEFFKEMKASGVEPDLESYHILLSALSDSGRMAEAHALFSAMT---CS 205

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD +T+  L+ G+C+  Q  EA  L+KEI K G +     Y ++I+  CK  KV      
Sbjct: 206 PDIMTYNVLMDGYCKIGQTYEAQSLMKEILKAGYEPNVFTYSIIINCYCKLDKV------ 259

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                                        EEA++++ K+IE
Sbjct: 260 -----------------------------EEAWEVFMKMIE 271


>gi|359482689|ref|XP_003632809.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Vitis vinifera]
          Length = 879

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 221/448 (49%), Gaps = 6/448 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIM-----ARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           N +L      G++  A KL D M     A    + ++  CI +++GL +  ++E+  K++
Sbjct: 169 NSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCI-MVKGLCKEGKLEEGRKLI 227

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +     G +P+ I YN ++ G CK+G +  A  L  E+ + G  P V TY  I+      
Sbjct: 228 EDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKK 287

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G FK       +   +G    +  Y  +I+   K   I +A+E ++ M   GC PDIVTY
Sbjct: 288 GDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTY 347

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++ SC+ GK  +A  ++   L +G+ PN  +Y  L+H+   +G +D     L  M E
Sbjct: 348 NTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTE 407

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             H P + TY  L++GL   G VD A+    +M+ +   PD   YN ++  LCK+  L  
Sbjct: 408 RGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPA 467

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  LL  +   S  P    Y TL+DG  + G +++A  L+   +E G++P  + +  +I 
Sbjct: 468 AKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIK 527

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+C+   +++A+  +  + KR        Y  VI G  K   +D A ++   M+  + KP
Sbjct: 528 GYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKP 587

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +   +++++      G    + K+++++
Sbjct: 588 NVVTYTSLINGFCRKGDLHRSLKIFREM 615



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 137/497 (27%), Positives = 230/497 (46%), Gaps = 35/497 (7%)

Query: 90  KLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI 149
           KL  + I +K +D  L          D  +   +++  C  GKL +  KLI+    +  I
Sbjct: 177 KLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVKGLCKEGKLEEGRKLIEDRWGQGCI 236

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P+  F   LI G  +   +E A+ +   + + G +P   TY  ++ G CK+G  ++   L
Sbjct: 237 PNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRL 296

Query: 210 LDEMSVSG-----------------------------------CEPDVITYNTILRTMFD 234
           L EM+  G                                   C+PD++TYNT++     
Sbjct: 297 LMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCR 356

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +GK  +A    +  L KG  P   +YT LI   CKQ G  RA   L +M   G  PD+VT
Sbjct: 357 DGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVT 416

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +LV+     G+ D A+ +   +L RG+ P++  YN L+  L  +    A   +L  M 
Sbjct: 417 YGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEML 476

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           + S  P  F Y  L++G  + G +D A   F   + K   P IV YN ++   CK GM+ 
Sbjct: 477 DQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMK 536

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A+  ++ +     +P   TY+T+IDG  K+  ++ A  ++ +M++    P+ +T+ +LI
Sbjct: 537 DAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPNVVTYTSLI 596

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            GFCR   +  ++ + +E+   G       Y ++I   CK  K+  A    E M+ ++  
Sbjct: 597 NGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAASFFEEMLMNKCV 656

Query: 535 PDDTVFSTIVKKVADDG 551
           P+D  F+ +V   + +G
Sbjct: 657 PNDVTFNYLVNGFSKNG 673



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 214/461 (46%), Gaps = 15/461 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK+++A +L++    +  +P+      LI    +    ++AS  L  M
Sbjct: 346 TYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEM 405

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD +TY  +V GL   G++  A+ + ++M   G  PD   YN ++  +    K 
Sbjct: 406 TERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKL 465

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A     + L +   P    Y  L++   +   +  A ++ +    +G +P IV YN++
Sbjct: 466 PAAKLLLAEMLDQSVLPDAFVYATLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAM 525

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK G   DA+  IN +  R + P+  TY+T++     +   D   K+   M +   
Sbjct: 526 IKGYCKFGMMKDAMACINRMKKRHLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKC 585

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TY  LING C+ G + R++  F +M +    P++VTY+ ++G+ CKE  L +A  
Sbjct: 586 KPNVVTYTSLINGFCRKGDLHRSLKIFREMQACGLVPNVVTYSILIGSFCKEAKLIDAAS 645

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCM------------EKAMVL--YGQMMENGIS 464
               +  + C P  +T+N L++G +K G              +++M L  +G+M+ +G +
Sbjct: 646 FFEEMLMNKCVPNDVTFNYLVNGFSKNGTRAISEKGNEFQENKQSMFLNFFGRMISDGWA 705

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P    + +++   C+      A+ L  ++  +G    + ++  ++HG+C   +      +
Sbjct: 706 PRSAAYNSILICLCQYGMFRTALQLSNKMTSKGCIPDSVSFVALLHGVCLEGRSKEWKNI 765

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +   ++ R       +S+I+ +    G T EA  + Q + E
Sbjct: 766 VSCNLNERELQIAVNYSSILDQYLPQG-TSEASVILQTMFE 805



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 83/286 (29%), Positives = 133/286 (46%), Gaps = 8/286 (2%)

Query: 290 PDIVTYNSLVNFSCKQGKYD------DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
           PD++  NSL+N   K G+ +      D +L I+    R ++  S     ++  L   G  
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTC--IMVKGLCKEGKL 220

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           +   K+++        P +  YN LI+G CK G ++ A   F ++  K   P + TY  +
Sbjct: 221 EEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAI 280

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +   CK+G      +LL  +N    +  +  YNT+ID   K G + KA+     M+E G 
Sbjct: 281 INGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGC 340

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD +T+ TLI G CR  +V EA  LL++   +G      +Y  +IH  CK    D A  
Sbjct: 341 KPDIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASN 400

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            L  M    +KPD   +  +V  +   G  + A  + +K++E  VF
Sbjct: 401 WLIEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF 446



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 74/279 (26%), Positives = 118/279 (42%), Gaps = 40/279 (14%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N   Y++LL  L     +  ++ +L+ M     SPT    +I+I      GLV++A+  +
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 386 NQMVSKNCQ-PDIVTYNTVLG--------------------------------------- 405
             ++      PD++  N++L                                        
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKLYDEMLEIDGAGDRCVDNYSTCIMVK 212

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            LCKEG L E  +L+    G  C P +I YNTLIDG  KKG ME A  L+ ++   G  P
Sbjct: 213 GLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLP 272

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
              T+  +I GFC+    +    LL E+  RG  +    Y  +I    K   +  A++ +
Sbjct: 273 TVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETI 332

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           E MI    KPD   ++T++     DG   EA +L ++ +
Sbjct: 333 EGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQAL 371


>gi|356571194|ref|XP_003553764.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g04760, chloroplastic-like [Glycine max]
          Length = 531

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/401 (30%), Positives = 212/401 (52%), Gaps = 4/401 (0%)

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           + I  A +VL  M   G  PD +TYN+++G LC RG + +A+   +++      P V+TY
Sbjct: 103 ESIPHAYQVLDRMKNKGFSPDIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTY 162

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
             ++      G   +AI    +       P +  Y  +I  +C++  + RA EV+  ++ 
Sbjct: 163 TILIEATLLQGGIDEAIKLLDEMFEINLQPDVFPYNSII-XMCREGYVDRAFEVISSISS 221

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +G + D++TYN L+     QGK++    ++++++++G E N +TY+ L+ SL   G  + 
Sbjct: 222 KGYALDVITYNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEE 281

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              +L  M +    P  + Y+ LI  LCK G VD AI   + M+S  C PDIV YNT+L 
Sbjct: 282 GVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILA 341

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            LCK+   +EAL +   L    CSP   +YNT+   L   G   +A+ +  +M++  + P
Sbjct: 342 CLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDX-VDP 400

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQ 523
           D I + +LI   CR   V+EA++LL ++    ++ + S  +Y +V+ GLC+  +V  A +
Sbjct: 401 DVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATE 460

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           VL  M+     P++T ++ +++ +   G   +A  L   L+
Sbjct: 461 VLAAMVDKGCLPNETTYTFLIEGIGFGGWLNDARDLATTLV 501



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/355 (33%), Positives = 194/355 (54%), Gaps = 7/355 (1%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
           +G + +A KL+D M   N  PD  F  N I  + R   +++A +V+  +   G   D IT
Sbjct: 172 QGGIDEAIKLLDEMFEINLQPDV-FPYNSIIXMCREGYVDRAFEVISSISSKGYALDVIT 230

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           YN+++  L  +G+  +   L+ +M   GCE +V+TY+ ++ ++  +GK ++ +G  KD  
Sbjct: 231 YNILLRSLXNQGKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMK 290

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           +KG  P    Y  LI  +CK+  +  AIEVLD M  +GC PDIV YN+++   CKQ + D
Sbjct: 291 KKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRAD 350

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC-WDAVDKILDIMNEASHSPTVFTYNIL 368
           +A+ +   L   G  PN+ +YNT+  +LGS G    A+  IL++++     P V  YN L
Sbjct: 351 EALSIFEKLGEVGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDXV--DPDVIAYNSL 408

Query: 369 INGLCKYGLVDRAINSF--NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           I+ LC+ G+VD AI      +M S  C+P +V+YN VL  LC+ G +++A ++L  +   
Sbjct: 409 ISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDK 468

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            C P   TY  LI+G+   G +  A  L   ++ N  +  + +   L   FC+ D
Sbjct: 469 GCLPNETTYTFLIEGIGFGGWLNDARDLATTLV-NMDAISEHSFERLYKTFCKLD 522



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/376 (29%), Positives = 195/376 (51%), Gaps = 4/376 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + CSRG L  A +  + + + N  P       LI   +    I++A K+L
Sbjct: 123 DIVTYNILIGSLCSRGMLHAALEFKNQLLKENFNPTVVTYTILIEATLLQGGIDEAIKLL 182

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M      PD   YN ++  +C+ G +  A  ++  +S  G   DVITYN +LR++ + 
Sbjct: 183 DEMFEINLQPDVFPYNSII-XMCREGYVDRAFEVISSISSKGYALDVITYNILLRSLXNQ 241

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK++       D + KGC   ++TY++LI  +C+   +   + +L DM  +G  PD   Y
Sbjct: 242 GKWEAGFELMSDMVAKGCEANVVTYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCY 301

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+   CK+G+ D A+ V++ ++S G  P+ + YNT+L  L  +   D    I + + E
Sbjct: 302 DPLIAVLCKEGRVDLAIEVLDVMISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGE 361

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SP   +YN + + L   G   RA+    +M+     PD++ YN+++  LC++GM++E
Sbjct: 362 VGCSPNASSYNTVFSALGSSGHKVRALGMILEMLDX-VDPDVIAYNSLISCLCRDGMVDE 420

Query: 416 ALQLL--HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           A++LL    +  S C P +++YN ++ GL + G +  A  +   M++ G  P++ T+  L
Sbjct: 421 AIELLVDMEMESSECKPSVVSYNIVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFL 480

Query: 474 IWGFCRADQVEEAVDL 489
           I G      + +A DL
Sbjct: 481 IEGIGFGGWLNDARDL 496



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 74/249 (29%), Positives = 130/249 (52%), Gaps = 6/249 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++ + C  GK+ +   L+  M ++   PD +    LI  L +  R++ A +VL +M
Sbjct: 265 TYSVLISSLCRDGKVEEGVGLLKDMKKKGLEPDGYCYDPLIAVLCKEGRVDLAIEVLDVM 324

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G VPD + YN ++  LCK+ +   A+++ +++   GC P+  +YNT+   +  +G  
Sbjct: 325 ISDGCVPDIVNYNTILACLCKQKRADEALSIFEKLGEVGCSPNASSYNTVFSALGSSGHK 384

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYN 296
            +A+G   + L     P +I Y  LI  +C+   +  AIE+L DM +E   C P +V+YN
Sbjct: 385 VRALGMILEMLDX-VDPDVIAYNSLISCLCRDGMVDEAIELLVDMEMESSECKPSVVSYN 443

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW--DAVDKILDIMN 354
            ++   C+ G+  DA  V+  ++ +G  PN  TY  L+  +G  G W  DA D    ++N
Sbjct: 444 IVLLGLCRVGRVSDATEVLAAMVDKGCLPNETTYTFLIEGIGFGG-WLNDARDLATTLVN 502

Query: 355 EASHSPTVF 363
             + S   F
Sbjct: 503 MDAISEHSF 511


>gi|326493766|dbj|BAJ85345.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 671

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 134/482 (27%), Positives = 247/482 (51%), Gaps = 51/482 (10%)

Query: 121 NKILQNFCSRGKLTDASKLIDIM-ARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +++  C++ +L DA +++D + A     P  H    L+ G  R  R+  A ++L    
Sbjct: 116 NILIKKLCAQRRLADAERVLDALKAAGAADPVSHN--TLVAGYCRDGRLADAERLLAAAG 173

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           +SG   + +TY  ++ G C+ G++  A+AL+  M V+   PD  TYNT+L  +    +++
Sbjct: 174 LSGAA-NVVTYTTLINGYCRSGRLADALALIASMPVA---PDTYTYNTVLMGLCGARQWE 229

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            A     + +R  CPP  +T+   I   C+   + RA+++LD M   GC+PD+V Y++LV
Sbjct: 230 DAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLV 289

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N   +QG+ DDA+ ++N +L +   PN+I YN  L  L     W+ V +++  M      
Sbjct: 290 NGFSEQGRVDDAIELLNGMLCK---PNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   T+++L + LC+ GLVD A+    QM    C+PD V YNT++ +  ++G +++AL+ 
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALK- 405

Query: 420 LHLLNGSSCSPCLI-----------------------------------TYNTLIDGLAK 444
             LLN   CSP +I                                   T+N LID L +
Sbjct: 406 --LLNSMPCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQ 463

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G +  A+ ++ QM + G +PD +T+ +LI G      VE A++L + +  + +      
Sbjct: 464 NGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSMPCKPDIF---G 520

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  V+ GLC++ + + A +++  M      P++  F+ ++  +   G+ + A ++++++ 
Sbjct: 521 YNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMP 580

Query: 565 EW 566
           ++
Sbjct: 581 KY 582



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 120/441 (27%), Positives = 223/441 (50%), Gaps = 12/441 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G+L DA  LI  M      PD +    ++ GL    + E A  ++  M
Sbjct: 182 TYTTLINGYCRSGRLADALALIASMP---VAPDTYTYNTVLMGLCGARQWEDAEALMAEM 238

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V +   P+ +T+   +   C+ G +  A+ LLD M   GC PDV+ Y+T++    + G+ 
Sbjct: 239 VRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLVNGFSEQGRV 298

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI      L   C P  I Y   ++ +C         +++ +M  + C P+  T++ L
Sbjct: 299 DDAIELLNGML---CKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCLPNEATFSML 355

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            +  C+ G  D A+ V+  +   G  P+++ YNTL++S   +G    VD  L ++N    
Sbjct: 356 TSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQG---RVDDALKLLNSMPC 412

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP V ++N  + GLC+    D A     QM+ ++C    +T+N ++ +LC+ G +N A++
Sbjct: 413 SPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQNGRVNNAIE 472

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +    C+P ++TY++LI+GL+++G +E A+ L+  M      PD   +  ++ G C
Sbjct: 473 VFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM---PCKPDIFGYNAVLKGLC 529

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           RA + E+A +L+  + ++        + ++I+ LC+   VD AI+V E M      PD  
Sbjct: 530 RAARWEDAGELISNMARKDCPPNEITFNILINSLCQKGLVDRAIEVFEQMPKYGSTPDIF 589

Query: 539 VFSTIVKKVADDGMTEEAYKL 559
            ++ ++   ++ G  ++A +L
Sbjct: 590 TYNALINGFSEQGRLDDARRL 610



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/476 (27%), Positives = 230/476 (48%), Gaps = 47/476 (9%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N +L   C   +  DA  L+  M R +  P+       IR   +   +++A 
Sbjct: 208 VAPDTYTYNTVLMGLCGARQWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAV 267

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M   G  PD + Y+ +V G  ++G++  AI LL+ M    C+P+ I YN  L+ +
Sbjct: 268 QLLDRMPQYGCTPDVVIYSTLVNGFSEQGRVDDAIELLNGML---CKPNTICYNAALKGL 324

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +++       + +RK C P   T+++L   +C+   +  A+EVL+ M   GC PD 
Sbjct: 325 CIAQRWEDVGQLIVEMVRKDCLPNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDA 384

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK---- 348
           V YN+L+    +QG+ DDA+ ++N++      P+ I++N  L  L     WD  ++    
Sbjct: 385 VIYNTLIYSFSEQGRVDDALKLLNSM---PCSPDVISFNAALKGLCRAERWDDAEELIVQ 441

Query: 349 -------------------------------ILDIMNEASHSPTVFTYNILINGLCKYGL 377
                                          + + M +   +P + TY+ LINGL + GL
Sbjct: 442 MLREDCPLIEMTFNILIDSLCQNGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGL 501

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           V+ AI  F  M    C+PDI  YN VL  LC+     +A +L+  +    C P  IT+N 
Sbjct: 502 VESAIELFQSM---PCKPDIFGYNAVLKGLCRAARWEDAGELISNMARKDCPPNEITFNI 558

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+ L +KG +++A+ ++ QM + G +PD  T+  LI GF    ++++A  LL  +  + 
Sbjct: 559 LINSLCQKGLVDRAIEVFEQMPKYGSTPDIFTYNALINGFSEQGRLDDARRLLSTMSCKP 618

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
           + +   +Y   + GLC++++   A +V+  M+  +  P++  F    +    +G+T
Sbjct: 619 DAV---SYNSALKGLCRAERWKEAEEVVAEMLRMKCPPNEVTFKYANRLFVPNGVT 671



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 102/409 (24%), Positives = 202/409 (49%), Gaps = 11/409 (2%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  LI+ L    R+  A +VL  +  + G  D +++N +V G C+ G++  A   L   +
Sbjct: 115 CNILIKKLCAQRRLADAERVLDAL-KAAGAADPVSHNTLVAGYCRDGRLADA-ERLLAAA 172

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
                 +V+TY T++     +G+   A+            P   TY  ++  +C      
Sbjct: 173 GLSGAANVVTYTTLINGYCRSGRLADALALIASM---PVAPDTYTYNTVLMGLCGARQWE 229

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A  ++ +M    C P+ VT+ + +   C+ G  D AV +++ +   G  P+ + Y+TL+
Sbjct: 230 DAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQYGCTPDVVIYSTLV 289

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           +    +G    VD  ++++N     P    YN  + GLC     +       +MV K+C 
Sbjct: 290 NGFSEQG---RVDDAIELLNGMLCKPNTICYNAALKGLCIAQRWEDVGQLIVEMVRKDCL 346

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+  T++ +   LC+ G+++ A+++L  ++   C P  + YNTLI   +++G ++ A+ L
Sbjct: 347 PNEATFSMLTSCLCQNGLVDCAMEVLEQMHKYGCRPDAVIYNTLIYSFSEQGRVDDALKL 406

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              M     SPD I+    + G CRA++ ++A +L+ ++ +    +    + ++I  LC+
Sbjct: 407 LNSM---PCSPDVISFNAALKGLCRAERWDDAEELIVQMLREDCPLIEMTFNILIDSLCQ 463

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + +V+ AI+V E M      PD   +S+++  +++ G+ E A +L+Q +
Sbjct: 464 NGRVNNAIEVFEQMPKYGCTPDIVTYSSLINGLSEQGLVESAIELFQSM 512



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 38/170 (22%), Positives = 89/170 (52%), Gaps = 5/170 (2%)

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +V  N ++  LC +  L +A ++L  L  +  +   +++NTL+ G  + G +  A  L  
Sbjct: 112 VVACNILIKKLCAQRRLADAERVLDALKAAGAAD-PVSHNTLVAGYCRDGRLADAERLLA 170

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
               +G + + +T+ TLI G+CR+ ++ +A+ L+  +    +      Y  V+ GLC ++
Sbjct: 171 AAGLSGAA-NVVTYTTLINGYCRSGRLADALALIASMPVAPDTY---TYNTVLMGLCGAR 226

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           + + A  ++  M+ +   P++  F+T ++    +G+ + A +L  ++ ++
Sbjct: 227 QWEDAEALMAEMVRNHCPPNEVTFATQIRAFCQNGLLDRAVQLLDRMPQY 276


>gi|356524758|ref|XP_003530995.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Glycine max]
          Length = 875

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 139/446 (31%), Positives = 223/446 (50%), Gaps = 20/446 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINL-IRGLIRIDRIEKASKVLQI 177
           T N +L+ FC  G + DA  L++ M +         C N+ + GL+R   + +A  VL  
Sbjct: 295 TFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLE-CYNIWLMGLLRNGELLEARLVLDE 353

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV  G  P+  TYN+M+ GLC+   +  A  L+D M  +G  PD + Y+T+L      GK
Sbjct: 354 MVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGK 413

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A     + +R GC P   T   L+  + K+     A E+L  M  +   PD VT N 
Sbjct: 414 VFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNI 473

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +VN  C+ G+ D A  +++ + + G  P S+       SL           I  I N ++
Sbjct: 474 VVNGLCRNGELDKASEIVSEMWTNG--PTSLDKGNSFASL-----------INSIHNVSN 520

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TY  LINGLCK G ++ A   F +M++KN +PD VTY+T + + CK+G ++ A 
Sbjct: 521 CLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAF 580

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++L  +  + CS  L TYN LI GL     + +   L  +M E GISPD  T+  +I   
Sbjct: 581 RVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCL 640

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE--LMISSRYKP 535
           C   + ++A+ LL E+  +G     S+++++I    KS    +A ++ E  L I  R   
Sbjct: 641 CEGGKAKDAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELFEVALNICGR--- 697

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQ 561
            + ++S +  ++   G   EA +L++
Sbjct: 698 KEALYSLMFNELLAGGQLSEAKELFE 723



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 225/449 (50%), Gaps = 17/449 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC      +A +L++ M     +PD     + I  L R  ++ +AS++ + M M
Sbjct: 223 NTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQM 282

Query: 181 SGGV----PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
              +    P+ +T+N+M+ G CK G +  A  L++ M   G    +  YN  L  +  NG
Sbjct: 283 DAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNG 342

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +  +A     + + KG  P   TY I+++ +C+   ++ A  ++D M   G  PD V Y+
Sbjct: 343 ELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYS 402

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L++  C +GK  +A  V++ ++  G +PN+ T NTLLHSL   G     +++L  MNE 
Sbjct: 403 TLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEK 462

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            + P   T NI++NGLC+ G +D+A    ++M +    P  +       +L         
Sbjct: 463 CYQPDTVTCNIVVNGLCRNGELDKASEIVSEMWTNG--PTSLDKGNSFASL--------- 511

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           +  +H  N S+C P  ITY TLI+GL K G +E+A   + +M+   + PD +T+ T IW 
Sbjct: 512 INSIH--NVSNCLPDGITYTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWS 569

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           FC+  ++  A  +LK++ + G       Y  +I GL  + ++     + + M      PD
Sbjct: 570 FCKQGKISSAFRVLKDMERNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPD 629

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              ++ I+  + + G  ++A  L  ++++
Sbjct: 630 ICTYNNIITCLCEGGKAKDAISLLHEMLD 658



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 127/479 (26%), Positives = 222/479 (46%), Gaps = 32/479 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T N ++   C    L+DA  L+D+M R    PD      L+ G     ++ +A 
Sbjct: 359 IEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAK 418

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL  M+ +G  P+T T N ++  L K G+   A  +L +M+    +PD +T N ++  +
Sbjct: 419 SVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGL 478

Query: 233 FDNGKFKQA----IGFWKD---QLRKG---------------CPPYLITYTILIEQVCKQ 270
             NG+  +A       W +    L KG               C P  ITYT LI  +CK 
Sbjct: 479 CRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKV 538

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             +  A +   +M  +   PD VTY++ +   CKQGK   A  V+ ++   G      TY
Sbjct: 539 GRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDMERNGCSKTLQTY 598

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N L+  LGS      +  + D M E   SP + TYN +I  LC+ G    AI+  ++M+ 
Sbjct: 599 NALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAKDAISLLHEMLD 658

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHL-LNGSSCSPCLITYNTLIDGLAKKGCME 449
           K   P++ ++  ++ A  K      A +L  + LN   C      Y+ + + L   G + 
Sbjct: 659 KGISPNVSSFKILIKAFSKSSDFKVACELFEVALN--ICGRKEALYSLMFNELLAGGQLS 716

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A  L+   ++  ++  +  ++ LI   C+ +++ +A  LL ++  +G    ++++  VI
Sbjct: 717 EAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYGFDHASFMPVI 776

Query: 510 HGLCK---SKKVD-MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            GL K    ++ D +A +++EL +  R  P D  +S   K+V    + ++    WQ +I
Sbjct: 777 DGLSKRGNKRQADELAKRMMELELEDR--PVDRTYSN-RKRVIPGKLLKDGGSDWQDII 832



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 206/435 (47%), Gaps = 32/435 (7%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+R  +R  R    S +   M+ +   P T T+N+++  LC+      A+ L ++M   G
Sbjct: 121 LLRSTLRHHRPGFVSWLYSDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKG 180

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP-PYLITYTILIEQVCKQCGIARA 276
           C P+  T   ++R +   G  KQA+    +     C     + Y  L+ + C++     A
Sbjct: 181 CCPNEFTLGILVRGLCRAGLVKQALELVNNN--NSCRIANRVVYNTLVSRFCREEMNNEA 238

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL---LSRGM-EPNSITYNT 332
             +++ M   G  PD+VT+NS ++  C+ GK  +A  +  ++      G+  PN +T+N 
Sbjct: 239 ERLVERMNELGVLPDVVTFNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNL 298

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           +L      G       +++ M +  +  ++  YNI + GL + G +  A    ++MV+K 
Sbjct: 299 MLKGFCKHGMMGDARGLVETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKG 358

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
            +P+  TYN ++  LC+  ML++A  L+ L+  +   P  + Y+TL+ G   +G + +A 
Sbjct: 359 IEPNAYTYNIMMDGLCRNHMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAK 418

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            +  +M+ NG  P+  T  TL+    +  +  EA ++L+++ ++  +       +V++GL
Sbjct: 419 SVLHEMIRNGCQPNTYTCNTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGL 478

Query: 513 CKSKKVDMAIQVLELMIS----------------------SRYKPDDTVFSTIVKKVADD 550
           C++ ++D A +++  M +                      S   PD   ++T++  +   
Sbjct: 479 CRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLPDGITYTTLINGLCKV 538

Query: 551 GMTEEAYKLWQKLIE 565
           G  EEA K   K IE
Sbjct: 539 GRLEEAKK---KFIE 550



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 102/379 (26%), Positives = 176/379 (46%), Gaps = 7/379 (1%)

Query: 193 MVGGLCKRGQIRSAIALLDEMSVS--GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           MV  L + G +  AI     +        P +  YN +LR+   + +       + D L 
Sbjct: 84  MVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLPLYNLLLRSTLRHHRPGFVSWLYSDMLA 143

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
               P   T+ +LI  +C+      A+++ + M  +GC P+  T   LV   C+ G    
Sbjct: 144 ARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRAGLVKQ 203

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ ++NN  S  +  N + YNTL+         +  +++++ MNE    P V T+N  I+
Sbjct: 204 ALELVNNNNSCRI-ANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVTFNSRIS 262

Query: 371 GLCKYGLVDRAINSFNQMVSKN----CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LC+ G V  A   F  M         +P++VT+N +L   CK GM+ +A  L+  +   
Sbjct: 263 ALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLVETMKKV 322

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
                L  YN  + GL + G + +A ++  +M+  GI P+  T+  ++ G CR   + +A
Sbjct: 323 GNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRNHMLSDA 382

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             L+  + + G      AY  ++HG C   KV  A  VL  MI +  +P+    +T++  
Sbjct: 383 RGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTCNTLLHS 442

Query: 547 VADDGMTEEAYKLWQKLIE 565
           +  +G T EA ++ QK+ E
Sbjct: 443 LWKEGRTLEAEEMLQKMNE 461



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 99/414 (23%), Positives = 195/414 (47%), Gaps = 15/414 (3%)

Query: 156 INLIRGLIRIDRIEKA-----SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           I+++R L ++  ++ A     S   Q   +S  +P    YN+++    +  +      L 
Sbjct: 82  ISMVRVLAQLGHVDDAITHFKSLRAQFPSLSPSLP---LYNLLLRSTLRHHRPGFVSWLY 138

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
            +M  +   P   T+N ++ ++ ++  F  A+  ++   +KGC P   T  IL+  +C+ 
Sbjct: 139 SDMLAARVAPQTYTFNLLIHSLCESRAFDHALQLFEKMPQKGCCPNEFTLGILVRGLCRA 198

Query: 271 CGIARAIEVLDDMAIEGCS-PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
             + +A+E++++     C   + V YN+LV+  C++   ++A  ++  +   G+ P+ +T
Sbjct: 199 GLVKQALELVNNN--NSCRIANRVVYNTLVSRFCREEMNNEAERLVERMNELGVLPDVVT 256

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASH----SPTVFTYNILINGLCKYGLVDRAINSF 385
           +N+ + +L   G      +I   M   +      P V T+N+++ G CK+G++  A    
Sbjct: 257 FNSRISALCRAGKVMEASRIFRDMQMDAELGLPRPNVVTFNLMLKGFCKHGMMGDARGLV 316

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
             M        +  YN  L  L + G L EA  +L  +      P   TYN ++DGL + 
Sbjct: 317 ETMKKVGNFDSLECYNIWLMGLLRNGELLEARLVLDEMVAKGIEPNAYTYNIMMDGLCRN 376

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             +  A  L   MM NG+ PD + + TL+ G+C   +V EA  +L E+ + G +      
Sbjct: 377 HMLSDARGLMDLMMRNGVYPDTVAYSTLLHGYCSRGKVFEAKSVLHEMIRNGCQPNTYTC 436

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             ++H L K  +   A ++L+ M    Y+PD    + +V  +  +G  ++A ++
Sbjct: 437 NTLLHSLWKEGRTLEAEEMLQKMNEKCYQPDTVTCNIVVNGLCRNGELDKASEI 490



 Score = 85.9 bits (211), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 78/317 (24%), Positives = 129/317 (40%), Gaps = 10/317 (3%)

Query: 60  GLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKT 119
           GL  N  +D+ +E+  + W++    L        L  +  +    LP         D  T
Sbjct: 477 GLCRNGELDKASEIVSEMWTNGPTSLDKGNSFASLINSIHNVSNCLP---------DGIT 527

Query: 120 NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
              ++   C  G+L +A K    M  +N  PD       I    +  +I  A +VL+ M 
Sbjct: 528 YTTLINGLCKVGRLEEAKKKFIEMLAKNLRPDSVTYDTFIWSFCKQGKISSAFRVLKDME 587

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            +G      TYN ++ GL    QI     L DEM   G  PD+ TYN I+  + + GK K
Sbjct: 588 RNGCSKTLQTYNALILGLGSNNQIFEIYGLKDEMKEKGISPDICTYNNIITCLCEGGKAK 647

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            AI    + L KG  P + ++ ILI+   K      A E+  ++A+  C      Y+ + 
Sbjct: 648 DAISLLHEMLDKGISPNVSSFKILIKAFSKSSDFKVACELF-EVALNICGRKEALYSLMF 706

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N     G+  +A  +    L R +   +  Y  L+  L         + +L  + +  + 
Sbjct: 707 NELLAGGQLSEAKELFEVSLDRYLTLKNFMYKDLIARLCQDERLADANSLLYKLIDKGYG 766

Query: 360 PTVFTYNILINGLCKYG 376
               ++  +I+GL K G
Sbjct: 767 FDHASFMPVIDGLSKRG 783


>gi|297849642|ref|XP_002892702.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338544|gb|EFH68961.1| hypothetical protein ARALYDRAFT_471420 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 667

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 115/395 (29%), Positives = 207/395 (52%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  VL  ++  G  PDT T+N ++ GLC   ++  A+ L+  M  +GC+P+V+TYN+I+ 
Sbjct: 119 AYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVN 178

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +  +G    A+   +    +     + TY+ +I+ +C+   I  AI +  +M  +G   
Sbjct: 179 GICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 238

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            +VTYNSLV   CK GK++D V ++ ++ SR + PN IT+N L+      G     +++ 
Sbjct: 239 SLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELY 298

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M     SP   TYN L++G C    +  A N  + MV  NC PDIVT+ +++   CK 
Sbjct: 299 KEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKV 358

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             ++E ++L   ++        +TY+ L+ G  + G +E A  L+ +M+  G+ PD +T+
Sbjct: 359 KRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTY 418

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             L+ G C   ++E+A+++ +++ K    +    Y ++I G+CK  KV+ A  +   +  
Sbjct: 419 GILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPC 478

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              KP+   ++ ++  +   G   EA  L +K+ E
Sbjct: 479 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 513



 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 125/445 (28%), Positives = 228/445 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC   K   A  ++  + +    PD      LI GL    ++ +A  ++  M
Sbjct: 102 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARM 161

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V +G  P+ +TYN +V G+CK G    A+ LL +M     + DV TY+TI+ ++  +G  
Sbjct: 162 VENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCI 221

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI  +K+   KG    L+TY  L+  +CK       +++L DM      P+++T+N L
Sbjct: 222 DAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVL 281

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK  +A  +   ++++G+ PN+ITYN+L+     +      + +LD+M   + 
Sbjct: 282 IDVFVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNC 341

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP + T+  LI G CK   VD  +  F ++  +    + VTY+ ++   C+ G L  A +
Sbjct: 342 SPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEE 401

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P ++TY  L+DGL   G +EKA+ ++  + ++ ++ D + +  +I G C
Sbjct: 402 LFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMC 461

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +VE+A +L   +  +G K     Y ++I GLCK   +  A  +L  M     +P+D 
Sbjct: 462 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDC 521

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++T+++    DG    + KL +++
Sbjct: 522 TYNTLIRAHLRDGDLTASAKLIEEM 546



 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/394 (31%), Positives = 196/394 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C  G  + A  L+  M  RN   D      +I  L R   I+ A  + + M
Sbjct: 172 TYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEM 231

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G     +TYN +VGGLCK G+    + LL +M+     P+VIT+N ++      GK 
Sbjct: 232 ETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKL 291

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A   +K+ + KG  P  ITY  L++  C Q  ++ A  +LD M    CSPDIVT+ SL
Sbjct: 292 QEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSL 351

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK  + D+ + +   +  RG+  N++TY+ L+      G  +  +++   M     
Sbjct: 352 IKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGV 411

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TY IL++GLC  G +++A+  F  +       DIV Y  ++  +CK G + +A  
Sbjct: 412 LPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWN 471

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   L      P ++TY  +I GL KKG + +A +L  +M E+G  P+D T+ TLI    
Sbjct: 472 LFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHL 531

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           R   +  +  L++E+   G     S+ ++VI  L
Sbjct: 532 RDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 565



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 117/430 (27%), Positives = 214/430 (49%), Gaps = 3/430 (0%)

Query: 141 DIMARRNQIPDFHFCIN--LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           D +   + I D   C    L  G++ I   + A  + Q M+ S  +P  + ++    G+ 
Sbjct: 18  DFLCTISGISDGRVCYGERLRSGIVDIKE-DDAIDLFQEMIRSRPLPSLVDFSRFFSGVA 76

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
              Q    +    +M ++G   ++ T N ++       K   A       ++ G  P   
Sbjct: 77  STKQFNLVLDFCKKMELNGIAHNIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTT 136

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T+  LI  +C +  ++ A+ ++  M   GC P++VTYNS+VN  CK G    A+ ++  +
Sbjct: 137 TFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALDLLRKM 196

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             R ++ +  TY+T++ SL   GC DA   +   M       ++ TYN L+ GLCK G  
Sbjct: 197 DERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLCKAGKW 256

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           +  +     M S+   P+++T+N ++    KEG L EA +L   +     SP  ITYN+L
Sbjct: 257 NDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTITYNSL 316

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +DG   +  + +A  +   M+ N  SPD +T  +LI G+C+  +V+E + L ++I KRG 
Sbjct: 317 MDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKISKRGL 376

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 Y +++ G C+S K+++A ++ + M+S    PD   +  ++  + D+G  E+A +
Sbjct: 377 VANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKLEKALE 436

Query: 559 LWQKLIEWKV 568
           +++ L + K+
Sbjct: 437 IFEDLQKSKM 446



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/432 (25%), Positives = 223/432 (51%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           K  DA  L   M R   +P          G+    +        + M ++G   +  T N
Sbjct: 45  KEDDAIDLFQEMIRSRPLPSLVDFSRFFSGVASTKQFNLVLDFCKKMELNGIAHNIYTLN 104

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           +M+   C+  +   A ++L ++   G EPD  T+NT++  +    K  +A+      +  
Sbjct: 105 IMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLESKVSEAVVLVARMVEN 164

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           GC P ++TY  ++  +CK    + A+++L  M       D+ TY+++++  C+ G  D A
Sbjct: 165 GCQPNVVTYNSIVNGICKSGDTSLALDLLRKMDERNVKADVFTYSTIIDSLCRDGCIDAA 224

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + +   + ++G++ + +TYN+L+  L   G W+   ++L  M      P V T+N+LI+ 
Sbjct: 225 ISLFKEMETKGIKSSLVTYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDV 284

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
             K G +  A   + +M++K   P+ +TYN+++   C +  L+EA  +L L+  ++CSP 
Sbjct: 285 FVKEGKLQEANELYKEMITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPD 344

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           ++T+ +LI G  K   +++ M L+ ++ + G+  + +T+  L+ GFC++ ++E A +L +
Sbjct: 345 IVTFTSLIKGYCKVKRVDEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQ 404

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           E+   G       Y +++ GLC + K++ A+++ E +  S+   D  +++ I++ +   G
Sbjct: 405 EMVSLGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGG 464

Query: 552 MTEEAYKLWQKL 563
             E+A+ L+  L
Sbjct: 465 KVEDAWNLFCSL 476



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 214/431 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++   C   K+++A  L+  M      P+     +++ G+ +      A  
Sbjct: 132 EPDTTTFNTLINGLCLESKVSEAVVLVARMVENGCQPNVVTYNSIVNGICKSGDTSLALD 191

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ M       D  TY+ ++  LC+ G I +AI+L  EM   G +  ++TYN+++  + 
Sbjct: 192 LLRKMDERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSLVTYNSLVGGLC 251

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK+   +   KD   +   P +IT+ +LI+   K+  +  A E+  +M  +G SP+ +
Sbjct: 252 KAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEMITKGISPNTI 311

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYNSL++  C Q +  +A  +++ ++     P+ +T+ +L+         D   K+   +
Sbjct: 312 TYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKI 371

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           ++        TY+IL+ G C+ G ++ A   F +MVS    PD++TY  +L  LC  G L
Sbjct: 372 SKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKL 431

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +AL++   L  S  +  ++ Y  +I+G+ K G +E A  L+  +   G+ P+ +T+  +
Sbjct: 432 EKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 491

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+   + EA  LL+++ + GN+  +  Y  +I    +   +  + +++E M S  +
Sbjct: 492 ISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 551

Query: 534 KPDDTVFSTIV 544
             D +    ++
Sbjct: 552 SADASSIKMVI 562



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 80/325 (24%), Positives = 160/325 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK  D  +L+  M  R  IP+      LI   ++  ++++A+++ + M
Sbjct: 242 TYNSLVGGLCKAGKWNDGVQLLKDMTSRKIIPNVITFNVLIDVFVKEGKLQEANELYKEM 301

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+TITYN ++ G C + ++  A  +LD M  + C PD++T+ ++++      + 
Sbjct: 302 ITKGISPNTITYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRV 361

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            + +  ++   ++G     +TY+IL++  C+   +  A E+  +M   G  PD++TY  L
Sbjct: 362 DEGMKLFRKISKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGIL 421

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  GK + A+ +  +L    M  + + Y  ++  +   G  +    +   +     
Sbjct: 422 LDGLCDNGKLEKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGV 481

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TY ++I+GLCK G +  A     +M     +P+  TYNT++ A  ++G L  + +
Sbjct: 482 KPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAK 541

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLA 443
           L+  +     S    +   +ID L+
Sbjct: 542 LIEEMKSCGFSADASSIKMVIDMLS 566



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 127/260 (48%), Gaps = 35/260 (13%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C + +L++A+ ++D+M R N  PD     +LI+G  ++ R+++  K+ + +
Sbjct: 312 TYNSLMDGYCMQNRLSEANNMLDLMVRNNCSPDIVTFTSLIKGYCKVKRVDEGMKLFRKI 371

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G V +T+TY+++V G C+ G++  A  L  EM   G  PDV+TY  +L  + DNGK 
Sbjct: 372 SKRGLVANTVTYSILVQGFCQSGKLEIAEELFQEMVSLGVLPDVMTYGILLDGLCDNGKL 431

Query: 239 KQAIGFWKDQLR-----------------------------------KGCPPYLITYTIL 263
           ++A+  ++D  +                                   KG  P ++TYT++
Sbjct: 432 EKALEIFEDLQKSKMNLDIVMYTIIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 491

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I  +CK+  ++ A  +L  M  +G  P+  TYN+L+    + G    +  +I  + S G 
Sbjct: 492 ISGLCKKGSLSEANILLRKMEEDGNEPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 551

Query: 324 EPNSITYNTLLHSLGSRGCW 343
             ++ +   ++  L S   W
Sbjct: 552 SADASSIKMVIDMLSSAVWW 571


>gi|222630089|gb|EEE62221.1| hypothetical protein OsJ_17008 [Oryza sativa Japonica Group]
          Length = 584

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 133/484 (27%), Positives = 233/484 (48%), Gaps = 32/484 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T N +++  C   ++  A K++D M+R+   PD      ++ G+ ++ R+E+A 
Sbjct: 100 VDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEAR 159

Query: 173 ------------------------------KVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
                                          V+  MV  G  P+ +TY  +V   CK  +
Sbjct: 160 GFLAETVPVQASYNAVVHALCGEFRMWEVFSVVNEMVQRGLQPNVVTYTTIVDAFCKARE 219

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +R A A+L  M   GC P+V+T+  +++  F++GK   A+  W   + +G  P  I+Y +
Sbjct: 220 LRMACAILARMVSMGCTPNVLTFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNV 279

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI  +C    +  A++  + M      P+  TY++LV+     G  D A+L+ N + S G
Sbjct: 280 LIRGLCCIGDLKGALDFFNSMKRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSG 339

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +PN + Y  ++  L  +  +D  + ++D M   +  P   T+N LI  LC  G V RA+
Sbjct: 340 CKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRAL 399

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           N F+ M    C P+  TYN +L  L +EG   +A  ++  +  +     L+TYNT+I+ L
Sbjct: 400 NVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDAFAMVIEMLNNGFELSLVTYNTVINCL 459

Query: 443 AKKGCMEK-AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
            +  CM K AM+L G+MM  GI PD  T   +I  +C+  +V  A  LL ++        
Sbjct: 460 CQM-CMRKHAMLLLGRMMVQGIQPDAFTFNAIIHAYCKEGKVSIAACLLGQMNAVNCPRN 518

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             AY ++I  LC   K+  A+  L  M+     P++  ++ +V+ +  +  T     L++
Sbjct: 519 VVAYTILISELCNQGKLSNAMVYLLKMLYEGICPNEATWNVLVRAIFTNIGTIGPIHLFK 578

Query: 562 KLIE 565
            ++E
Sbjct: 579 YIVE 582



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 211/425 (49%), Gaps = 30/425 (7%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +L+  L+R + +     V   M  +G  P+  TYN+++  LC+  ++ +A  +LDEMS  
Sbjct: 74  HLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKMLDEMSRK 133

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGF------------------------WK------ 246
           GC PD +++ TI+  M   G+ ++A GF                        W+      
Sbjct: 134 GCHPDEVSHGTIVSGMCKLGRVEEARGFLAETVPVQASYNAVVHALCGEFRMWEVFSVVN 193

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           + +++G  P ++TYT +++  CK   +  A  +L  M   GC+P+++T+ +LV    + G
Sbjct: 194 EMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVLTFTALVKGFFEDG 253

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K  DA+ + + ++  G  P++I+YN L+  L   G         + M   +  P   TY+
Sbjct: 254 KVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSMKRNALLPNATTYS 313

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L++G    G +D A+  +N+M S  C+P++V Y  ++  LCK+ M ++A  L+  +   
Sbjct: 314 TLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMFDQAESLIDKMLMD 373

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           +C P  +T+NTLI  L   G + +A+ ++  M  NG  P+D T+  L+ G  R    ++A
Sbjct: 374 NCPPNTVTFNTLIGRLCDCGRVGRALNVFHGMRRNGCHPNDRTYNELLHGLFREGNHKDA 433

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             ++ E+   G ++    Y  VI+ LC+      A+ +L  M+    +PD   F+ I+  
Sbjct: 434 FAMVIEMLNNGFELSLVTYNTVINCLCQMCMRKHAMLLLGRMMVQGIQPDAFTFNAIIHA 493

Query: 547 VADDG 551
              +G
Sbjct: 494 YCKEG 498



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/405 (25%), Positives = 191/405 (47%), Gaps = 8/405 (1%)

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC-E 219
           GL     ++     LQ M + G           +G   + G    A+      S  GC +
Sbjct: 7   GLPAAGDVDGVQYALQEMRLRGVACTEDALVAAIGAFARAGSADRALKTFYRASDLGCRD 66

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P V  YN +L  +         +  + +  + G  P + TY +LI  +C+   +  A ++
Sbjct: 67  PGVRVYNHLLDALLRENMVGAVVPVYDNMRKAGVDPNVYTYNLLIRALCQNDRVDAARKM 126

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-G 338
           LD+M+ +GC PD V++ ++V+  CK G+ ++A       L+  + P   +YN ++H+L G
Sbjct: 127 LDEMSRKGCHPDEVSHGTIVSGMCKLGRVEEA----RGFLAETV-PVQASYNAVVHALCG 181

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
               W+ V  +++ M +    P V TY  +++  CK   +  A     +MVS  C P+++
Sbjct: 182 EFRMWE-VFSVVNEMVQRGLQPNVVTYTTIVDAFCKARELRMACAILARMVSMGCTPNVL 240

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           T+  ++    ++G +++AL + H +     +P  I+YN LI GL   G ++ A+  +  M
Sbjct: 241 TFTALVKGFFEDGKVHDALSMWHWMVDEGWAPSTISYNVLIRGLCCIGDLKGALDFFNSM 300

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
             N + P+  T+ TL+ GF  A  ++ A+ +  E+   G K     Y  +I  LCK    
Sbjct: 301 KRNALLPNATTYSTLVDGFSNAGDLDGAMLIWNEMKSSGCKPNVVVYTNMIDVLCKKMMF 360

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D A  +++ M+     P+   F+T++ ++ D G    A  ++  +
Sbjct: 361 DQAESLIDKMLMDNCPPNTVTFNTLIGRLCDCGRVGRALNVFHGM 405


>gi|255585033|ref|XP_002533225.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526957|gb|EEF29157.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 605

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 127/412 (30%), Positives = 208/412 (50%), Gaps = 31/412 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N IL   C +GKL +A  L+  M      P+ +    L+ G  ++  +++A++V+
Sbjct: 82  DNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSGYCKLGWLKEAAEVI 141

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            IM  +  +PD  TY  ++GGLCK G+I  A  L DEM      P V+TYN ++   F+ 
Sbjct: 142 DIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPHVVTYNMLINGCFEC 201

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
               +      +   KG  P  +TY ++++   K+  +  A   L  M   G SPD VT+
Sbjct: 202 SSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELRKMEESGFSPDCVTF 261

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDA--------- 345
           N+L N  CK G+  +A  +++ +  +G++ NS+T NT+LH+L G R   DA         
Sbjct: 262 NTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGERKLDDAYKLLSSASK 321

Query: 346 ----VDKI-----------------LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
               VD++                  D M E    P++ TY  +I GLC+ G  D++I+ 
Sbjct: 322 RGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDK 381

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            N+++     PD  TYNT++   C+EG +++A    + +   S  P L T N L+ GL  
Sbjct: 382 CNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCT 441

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           +G ++KA+ L+   +  G + D +T  T+I G C   + EEA DLL E+ ++
Sbjct: 442 EGMLDKALKLFKTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEK 493



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 119/439 (27%), Positives = 203/439 (46%), Gaps = 37/439 (8%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDAS----------KLIDIMARRNQIPDFHFCINL 158
           D  F   DE  N K+L +  +   L +            +LID M  +   P+      +
Sbjct: 170 DEAFRLRDEMENLKLLPHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVV 229

Query: 159 IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
           ++  ++  +++ A   L+ M  SG  PD +T+N +  G CK G++  A  ++DEMS  G 
Sbjct: 230 VKWYVKEGKMDNAGNELRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGL 289

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
           + + +T NTIL T+    K   A        ++G     ++Y  LI    K   + ++  
Sbjct: 290 KMNSVTLNTILHTLCGERKLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFK---VGKSX- 345

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
             D+M  +   P I+TY +++   C+ GK D ++   N LL  G+ P+  TYNT++    
Sbjct: 346 XWDEMKEKEIIPSIITYGTMIGGLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYC 405

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
             G  D      + M + S  P +FT NIL+ GLC  G++D+A+  F   +SK    D V
Sbjct: 406 REGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLFKTWISKGKAIDAV 465

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA------M 452
           T+NT++  LC+EG   EA  LL  +      P   T+N ++  LA  G M++A      +
Sbjct: 466 TFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADAGRMKEAEEFMSGI 525

Query: 453 VLYGQMMENGIS-----------------PDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           V  G++ +  IS                 P+ +     I   C   + ++A+ +++E  +
Sbjct: 526 VEQGKLQDQTISLNKRKTESSSETSQESDPNSVAFSEQINELCTQGKYKDAMHMIQESTQ 585

Query: 496 RGNKMRNSAYRLVIHGLCK 514
           +G  +  S Y  ++ GL K
Sbjct: 586 KGIILHKSTYISLMEGLIK 604



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 170/329 (51%), Gaps = 3/329 (0%)

Query: 219 EPDVITYNTILRTMF---DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
           +P+++T NT+++ +           +   + D ++ G      T+ ILI   C +  ++ 
Sbjct: 7   KPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSE 66

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           AI ++  M    C PD V+YN++++  CK+GK ++A  ++ ++ + G+ PN  T+N L+ 
Sbjct: 67  AIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVS 126

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                G      +++DIM   +  P V TY  LI GLCK G +D A    ++M +    P
Sbjct: 127 GYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLP 186

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
            +VTYN ++    +     +  +L+  + G    P  +TYN ++    K+G M+ A    
Sbjct: 187 HVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNEL 246

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M E+G SPD +T  TL  G+C+A ++ EA  ++ E+ ++G KM +     ++H LC  
Sbjct: 247 RKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGE 306

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +K+D A ++L       Y  D+  + T++
Sbjct: 307 RKLDDAYKLLSSASKRGYFVDEVSYGTLI 335



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/415 (25%), Positives = 189/415 (45%), Gaps = 34/415 (8%)

Query: 185 PDTITYNMMVGGLCK---RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           P+ +T N ++  L +   +  +  + A+  ++   G E +  T+N ++       K  +A
Sbjct: 8   PNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLSEA 67

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           IG         C P  ++Y  +++ +CK+  +  A ++L DM   G  P+  T+N LV+ 
Sbjct: 68  IGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILVSG 127

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK G   +A  VI+ +    + P+  TY TL+  L   G  D   ++ D M      P 
Sbjct: 128 YCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLLPH 187

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TYN+LING  +     +     ++M  K  +P+ VTYN V+    KEG ++ A   L 
Sbjct: 188 VVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNELR 247

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +  S  SP  +T+NTL +G  K G + +A  +  +M   G+  + +T  T++   C   
Sbjct: 248 KMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEMSRKGLKMNSVTLNTILHTLCGER 307

Query: 482 QVEEAVDLLKEIGKRG------------------------NKMRNS-------AYRLVIH 510
           ++++A  LL    KRG                        ++M+          Y  +I 
Sbjct: 308 KLDDAYKLLSSASKRGYFVDEVSYGTLIMGYFKVGKSXXWDEMKEKEIIPSIITYGTMIG 367

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           GLC+S K D +I     ++ S   PD T ++TI+     +G  ++A+    K+++
Sbjct: 368 GLCRSGKTDQSIDKCNELLESGLVPDQTTYNTIILGYCREGQVDKAFHFRNKMVK 422



 Score = 98.2 bits (243), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 77/279 (27%), Positives = 121/279 (43%), Gaps = 38/279 (13%)

Query: 323 MEPNSITYNTLLHSLGSRGCWDAV---DKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           ++PN +T NTL+ +L       +V     I   + +        T+NILI G C    + 
Sbjct: 6   LKPNLLTLNTLIKALVRYPSKPSVYLSKAIFSDVIKLGVEVNTNTFNILICGCCIENKLS 65

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            AI    +M   +C PD V+YNT+L  LCK+G LNEA  LL  +  +   P   T+N L+
Sbjct: 66  EAIGLIGKMKHFSCFPDNVSYNTILDVLCKKGKLNEARDLLLDMKNNGLFPNRNTFNILV 125

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA------------- 486
            G  K G +++A  +   M  N + PD  T+ TLI G C+  +++EA             
Sbjct: 126 SGYCKLGWLKEAAEVIDIMARNNVLPDVRTYTTLIGGLCKDGKIDEAFRLRDEMENLKLL 185

Query: 487 ----------------------VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
                                  +L+ E+  +G K     Y +V+    K  K+D A   
Sbjct: 186 PHVVTYNMLINGCFECSSSLKGFELIDEMEGKGVKPNAVTYNVVVKWYVKEGKMDNAGNE 245

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           L  M  S + PD   F+T+       G   EA+++  ++
Sbjct: 246 LRKMEESGFSPDCVTFNTLSNGYCKAGRLSEAFRMMDEM 284



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/225 (28%), Positives = 107/225 (47%), Gaps = 12/225 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T N I+  +C  G++  A    + M +++  PD   C  L+RGL     ++KA K+ 
Sbjct: 393 DQTTYNTIILGYCREGQVDKAFHFRNKMVKKSFKPDLFTCNILVRGLCTEGMLDKALKLF 452

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +  +  G   D +T+N ++ GLC+ G+   A  LL EM      PD  T+N IL  + D 
Sbjct: 453 KTWISKGKAIDAVTFNTIISGLCEEGRFEEAFDLLAEMEEKKLGPDCYTHNAILSALADA 512

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K+A  F    + +G    L   TI + +  ++   +       D       P+ V +
Sbjct: 513 GRMKEAEEFMSGIVEQG---KLQDQTISLNK--RKTESSSETSQESD-------PNSVAF 560

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           +  +N  C QGKY DA+ +I     +G+  +  TY +L+  L  R
Sbjct: 561 SEQINELCTQGKYKDAMHMIQESTQKGIILHKSTYISLMEGLIKR 605


>gi|145336953|ref|NP_176455.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806497|sp|Q3ECK2.2|PPR92_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g62680, mitochondrial; Flags: Precursor
 gi|332195872|gb|AEE33993.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 548

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 226/447 (50%), Gaps = 6/447 (1%)

Query: 132 KLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           KL DA  L   M +    P   DF+  ++ I  L + D +    K ++++   G   D  
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL---GIRNDLY 121

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T+N+++   C   Q+  A+++L +M   G EPD +T  +++       +   A+      
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  G  P ++ Y  +I+ +CK   +  A +   ++  +G  P++VTY +LVN  C   ++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            DA  ++++++ + + PN ITY+ LL +    G      ++ + M   S  P + TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           INGLC +  +D A   F+ MVSK C  D+V+YNT++   CK   + + ++L   ++    
Sbjct: 302 INGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
               +TYNTLI G  + G ++KA   + QM   GISPD  T+  L+ G C   ++E+A+ 
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           + +++ KR   +    Y  VI G+CK+ KV+ A  +   +     KPD   ++T++  + 
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 549 DDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             G+  E   L+ K+ +  + +   TL
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCTL 508



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 114/356 (32%), Positives = 182/356 (51%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   ++  FC R +++DA  L+D M      PD      +I  L +  R+  A  
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
             + +   G  P+ +TY  +V GLC   +   A  LL +M      P+VITY+ +L    
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            NGK  +A   +++ +R    P ++TY+ LI  +C    I  A ++ D M  +GC  D+V
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVV 331

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN+L+N  CK  + +D + +   +  RG+  N++TYNTL+      G  D   +    M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +    SP ++TYNIL+ GLC  G +++A+  F  M  +    DIVTY TV+  +CK G +
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            EA  L   L+     P ++TY T++ GL  KG + +   LY +M + G+  +D T
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 202/401 (50%)

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
           +R  ++  A  +   MV S   P  + +N ++  + K  +    I+L  +M V G   D+
Sbjct: 61  LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            T+N ++       +   A+      L+ G  P  +T   L+   C++  ++ A+ ++D 
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G  PDIV YN++++  CK  + +DA      +  +G+ PN +TY  L++ L +   
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           W    ++L  M +   +P V TY+ L++   K G V  A   F +MV  +  PDIVTY++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LC    ++EA Q+  L+    C   +++YNTLI+G  K   +E  M L+ +M + G
Sbjct: 301 LINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +  + +T+ TLI GF +A  V++A +   ++   G       Y +++ GLC + +++ A+
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            + E M       D   ++T+++ +   G  EEA+ L+  L
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 193/385 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + ND  T N ++  FC   +++ A  ++  M +    PD     +L+ G  R +R+  A 
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PD + YN ++  LCK  ++  A     E+   G  P+V+TY  ++  +
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            ++ ++  A     D ++K   P +ITY+ L++   K   +  A E+ ++M      PDI
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY+SL+N  C   + D+A  + + ++S+G   + ++YNTL++        +   K+   
Sbjct: 296 VTYSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M++        TYN LI G  + G VD+A   F+QM      PDI TYN +LG LC  G 
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L +AL +   +        ++TY T+I G+ K G +E+A  L+  +   G+ PD +T+ T
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           ++ G C    + E   L  ++ + G
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEG 500



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 81/334 (24%), Positives = 165/334 (49%)

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           +T   + K   AI  + D ++    P ++ +  L+  + K       I +   M + G  
Sbjct: 58  KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            D+ T+N ++N  C   +   A+ ++  +L  G EP+ +T  +L++    R        +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           +D M E  + P +  YN +I+ LCK   V+ A + F ++  K  +P++VTY  ++  LC 
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
               ++A +LL  +     +P +ITY+ L+D   K G + +A  L+ +M+   I PD +T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +LI G C  D+++EA  +   +  +G      +Y  +I+G CK+K+V+  +++   M 
Sbjct: 298 YSSLINGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                 +   ++T+++     G  ++A + + ++
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391


>gi|449435202|ref|XP_004135384.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g22960, mitochondrial-like [Cucumis sativus]
          Length = 717

 Score =  210 bits (534), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 131/488 (26%), Positives = 230/488 (47%), Gaps = 35/488 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D K  N+IL+       L+ A  +  +M +    P       ++    +  R+++A ++L
Sbjct: 179 DVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELL 238

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ +TYN++V GL K+G++  A  L++EM  SG      TYN ++      
Sbjct: 239 SEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQK 298

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G F +A    ++ + +   P L TY  L+  +CK   +        DM     +PDIV++
Sbjct: 299 GLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDMLKSKFTPDIVSF 358

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NSL+   C+ G   +A L+ + L  R + P  ITYNTL+H L   G  DA  ++   M +
Sbjct: 359 NSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYLDAALRLKKEMTD 418

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ--------------------- 394
               P +FTY IL+NG  K G V  A   FN+M+SK  +                     
Sbjct: 419 QGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTRIVGEMKIADTSV 478

Query: 395 --------------PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                         PD++TYN  + ALC++G   EA  LL  +      P  +TY ++I+
Sbjct: 479 AFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGLIPDHVTYTSIIN 538

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  K G + KA  ++ +M+  G++P  +T+  LI        ++ A     ++ ++    
Sbjct: 539 GFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFMYFSKMLEKSVPA 598

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  +I+GLC ++++D A +  + M      P+   ++ ++ +  + G  EEA +L+
Sbjct: 599 NVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESCNMGYWEEALRLY 658

Query: 561 QKLIEWKV 568
           +++++ K+
Sbjct: 659 REMLDRKI 666



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 200/430 (46%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           + D M R   +PD   C  ++R L   + + KA  V  +M   G  P  +TYN M+   C
Sbjct: 167 VFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYC 226

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K G++  A+ LL EM   GC P+ +TYN ++  +   G+ +QA G  ++ L  G      
Sbjct: 227 KEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAY 286

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY  LI   C++     A +++++M      P + TYN+L+   CK  +     L  +++
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L     P+ +++N+LL+     GC      + D +      PTV TYN LI+GLC +G +
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A+    +M  +   PDI TY  ++    K G ++ A    + +      P    YNT 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I G  K      A  +  +M+  G  PD IT+   +   C+    EEA DLL+ +   G 
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
              +  Y  +I+G  K+  +  A +V   M+S    P    ++ ++   A   M + A+ 
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 559 LWQKLIEWKV 568
            + K++E  V
Sbjct: 587 YFSKMLEKSV 596



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/359 (31%), Positives = 187/359 (52%), Gaps = 2/359 (0%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           + + D+M  +G  PDV   N ILR + D     +A   +    + G  P ++TY  +++ 
Sbjct: 165 LLVFDKMIRNGLLPDVKNCNRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDS 224

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
            CK+  + +A+E+L +M   GC P+ VTYN LVN   K+G+ + A  +I  +L+ G+  +
Sbjct: 225 YCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVS 284

Query: 327 SITYNTLLHSLGSRGCW-DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           + TYN L++    +G + +A D + +++N  +  PT+ TYN L+ GLCK+  V      F
Sbjct: 285 AYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAF-PTLSTYNTLMYGLCKWVQVTGVRLRF 343

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           + M+     PDIV++N++L   C+ G ++EA  L   L      P +ITYNTLI GL   
Sbjct: 344 SDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMW 403

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G ++ A+ L  +M + G+ PD  T+  L+ G  +   V  A     E+  +G K    AY
Sbjct: 404 GYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAY 463

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              I G  K     +A  + E M+++ + PD   ++  V  +   G  EEA  L + ++
Sbjct: 464 NTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMV 522



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/413 (28%), Positives = 196/413 (47%), Gaps = 1/413 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC +G   +A  L++ M  R   P       L+ GL +  ++         M
Sbjct: 287 TYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQVTGVRLRFSDM 346

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + S   PD +++N ++ G C+ G I  A  L DE+      P VITYNT++  +   G  
Sbjct: 347 LKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTLIHGLCMWGYL 406

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+   K+   +G  P + TYTIL+    K   ++ A    ++M  +G  PD   YN+ 
Sbjct: 407 DAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGLKPDRFAYNTR 466

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K      A  +   +L+ G  P+ ITYN  +H+L  +G ++    +L+ M     
Sbjct: 467 IVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACDLLENMVSDGL 526

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  +ING  K G + +A   FN+M+SK   P +VTY  ++ A   + ML+ A  
Sbjct: 527 IPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHAAKQMLDLAFM 586

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               +   S    +ITYN +I+GL     M++A   + +M E GI P+  ++  LI   C
Sbjct: 587 YFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKFSYTILINESC 646

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
                EEA+ L +E+  R  +  +  + + +  L +  +V  A+Q +E +I +
Sbjct: 647 NMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRDYQVH-AVQCVESLIQN 698



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/467 (26%), Positives = 211/467 (45%), Gaps = 35/467 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L ++C  G++  A +L+  M  R   P+      L+ GL +   +E+A  +++ M
Sbjct: 217 TYNTMLDSYCKEGRVDQALELLSEMQERGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEM 276

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL--------- 229
           + SG      TYN ++ G C++G    A  L++EM      P + TYNT++         
Sbjct: 277 LNSGLNVSAYTYNPLINGFCQKGLFVEAFDLVEEMVNRRAFPTLSTYNTLMYGLCKWVQV 336

Query: 230 ---RTMFDN---GKFKQAIGFWKDQL----RKGC----------------PPYLITYTIL 263
              R  F +    KF   I  +   L    R GC                 P +ITY  L
Sbjct: 337 TGVRLRFSDMLKSKFTPDIVSFNSLLYGYCRTGCISEAFLLFDELKCRDLVPTVITYNTL 396

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I  +C    +  A+ +  +M  +G  PDI TY  LVN   K G    A    N +LS+G+
Sbjct: 397 IHGLCMWGYLDAALRLKKEMTDQGLFPDIFTYTILVNGCFKLGYVSMARGFFNEMLSKGL 456

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           +P+   YNT +              + + M  A   P V TYN+ ++ LC+ G  + A +
Sbjct: 457 KPDRFAYNTRIVGEMKIADTSVAFSMQEEMLAAGFPPDVITYNVFVHALCQQGNFEEACD 516

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               MVS    PD VTY +++    K G L +A ++ + +     +P ++TY  LI   A
Sbjct: 517 LLENMVSDGLIPDHVTYTSIINGFVKNGHLRKAREVFNEMLSKGVAPSVVTYTVLIHAHA 576

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
            K  ++ A + + +M+E  +  + IT+  +I G C   +++EA     E+ ++G      
Sbjct: 577 AKQMLDLAFMYFSKMLEKSVPANVITYNAIINGLCMTRRMDEAYKYFDEMEEKGILPNKF 636

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +Y ++I+  C     + A+++   M+  + +PD    S  +K +  D
Sbjct: 637 SYTILINESCNMGYWEEALRLYREMLDRKIQPDSFTHSVFLKNLHRD 683



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 77/139 (55%)

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           N ++  L  +  + KA  +YG M + GI P  +T+ T++  +C+  +V++A++LL E+ +
Sbjct: 184 NRILRVLRDENLLSKAKNVYGMMEQFGIKPTVVTYNTMLDSYCKEGRVDQALELLSEMQE 243

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           RG    +  Y ++++GL K  +++ A  ++E M++S        ++ ++      G+  E
Sbjct: 244 RGCYPNDVTYNVLVNGLSKKGELEQAKGLIEEMLNSGLNVSAYTYNPLINGFCQKGLFVE 303

Query: 556 AYKLWQKLIEWKVFEKGTT 574
           A+ L ++++  + F   +T
Sbjct: 304 AFDLVEEMVNRRAFPTLST 322


>gi|15240891|ref|NP_195731.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75174092|sp|Q9LFC5.1|PP360_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g01110
 gi|6759434|emb|CAB69839.1| putative protein [Arabidopsis thaliana]
 gi|28973740|gb|AAO64186.1| unknown protein [Arabidopsis thaliana]
 gi|110736884|dbj|BAF00399.1| hypothetical protein [Arabidopsis thaliana]
 gi|332002917|gb|AED90300.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 729

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 128/442 (28%), Positives = 217/442 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +    KL +A +   ++  +        C  LI  L+RI  +E A  V Q +  SG
Sbjct: 171 LIRTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSG 230

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T N+MV  LCK G++      L ++   G  PD++TYNT++      G  ++A 
Sbjct: 231 VGINVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAF 290

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG  P + TY  +I  +CK     RA EV  +M   G SPD  TY SL+  +
Sbjct: 291 ELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEA 350

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK+G   +   V +++ SR + P+ + +++++      G  D      + + EA   P  
Sbjct: 351 CKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDN 410

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y ILI G C+ G++  A+N  N+M+ + C  D+VTYNT+L  LCK  ML EA +L + 
Sbjct: 411 VIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNE 470

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +   +  P   T   LIDG  K G ++ AM L+ +M E  I  D +T+ TL+ GF +   
Sbjct: 471 MTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGD 530

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++ A ++  ++  +       +Y ++++ LC    +  A +V + MIS   KP   + ++
Sbjct: 531 IDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNS 590

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           ++K     G   +     +K+I
Sbjct: 591 MIKGYCRSGNASDGESFLEKMI 612



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/459 (26%), Positives = 225/459 (49%), Gaps = 37/459 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  + S+G + +A +L++ M  +   P  +    +I GL +  + E+A +V 
Sbjct: 269 DIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVF 328

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ SG  PD+ TY  ++   CK+G +     +  +M      PD++ +++++     +
Sbjct: 329 AEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRS 388

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+ ++      G  P  + YTILI+  C++  I+ A+ + ++M  +GC+ D+VTY
Sbjct: 389 GNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTY 448

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS---------------------------- 327
           N++++  CK+    +A  + N +  R + P+S                            
Sbjct: 449 NTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKE 508

Query: 328 -------ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
                  +TYNTLL   G  G  D   +I   M      PT  +Y+IL+N LC  G +  
Sbjct: 509 KRIRLDVVTYNTLLDGFGKVGDIDTAKEIWADMVSKEILPTPISYSILVNALCSKGHLAE 568

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A   +++M+SKN +P ++  N+++   C+ G  ++    L  +      P  I+YNTLI 
Sbjct: 569 AFRVWDEMISKNIKPTVMICNSMIKGYCRSGNASDGESFLEKMISEGFVPDCISYNTLIY 628

Query: 441 GLAKKGCMEKAMVLYGQMMEN--GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           G  ++  M KA  L  +M E   G+ PD  T+ +++ GFCR +Q++EA  +L+++ +RG 
Sbjct: 629 GFVREENMSKAFGLVKKMEEEQGGLVPDVFTYNSILHGFCRQNQMKEAEVVLRKMIERGV 688

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
               S Y  +I+G      +  A ++ + M+   + PDD
Sbjct: 689 NPDRSTYTCMINGFVSQDNLTEAFRIHDEMLQRGFSPDD 727



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 194/408 (47%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           ++  L +  ++EK    L  +   G  PD +TYN ++     +G +  A  L++ M   G
Sbjct: 241 MVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKG 300

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P V TYNT++  +  +GK+++A   + + LR G  P   TY  L+ + CK+  +    
Sbjct: 301 FSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETE 360

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +V  DM      PD+V ++S+++   + G  D A++  N++   G+ P+++ Y  L+   
Sbjct: 361 KVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGY 420

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             +G       + + M +   +  V TYN +++GLCK  ++  A   FN+M  +   PD 
Sbjct: 421 CRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDS 480

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            T   ++   CK G L  A++L   +        ++TYNTL+DG  K G ++ A  ++  
Sbjct: 481 YTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDIDTAKEIWAD 540

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+   I P  I++  L+   C    + EA  +  E+  +  K        +I G C+S  
Sbjct: 541 MVSKEILPTPISYSILVNALCSKGHLAEAFRVWDEMISKNIKPTVMICNSMIKGYCRSGN 600

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                  LE MIS  + PD   ++T++     +    +A+ L +K+ E
Sbjct: 601 ASDGESFLEKMISEGFVPDCISYNTLIYGFVREENMSKAFGLVKKMEE 648



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 212/443 (47%), Gaps = 24/443 (5%)

Query: 130 RGKLTDASKLIDIMARRNQIPDF-HFCINL---IRGLIRIDRIEKASKVLQIMVMSGGVP 185
           R  LT   + +D +      P+F H  ++L   I  L+R  R+  A   L  M+   GV 
Sbjct: 89  RNDLTLGQRFVDQLGF--HFPNFKHTSLSLSAMIHILVRSGRLSDAQSCLLRMIRRSGV- 145

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
                         R +I +++    + + S C  +   ++ ++RT     K ++A   +
Sbjct: 146 -------------SRLEIVNSL----DSTFSNCGSNDSVFDLLIRTYVQARKLREAHEAF 188

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
                KG    +     LI  + +   +  A  V  +++  G   ++ T N +VN  CK 
Sbjct: 189 TLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVGINVYTLNIMVNALCKD 248

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           GK +     ++ +  +G+ P+ +TYNTL+ +  S+G  +   ++++ M     SP V+TY
Sbjct: 249 GKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFELMNAMPGKGFSPGVYTY 308

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N +INGLCK+G  +RA   F +M+     PD  TY ++L   CK+G + E  ++   +  
Sbjct: 309 NTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACKKGDVVETEKVFSDMRS 368

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P L+ +++++    + G ++KA++ +  + E G+ PD++ +  LI G+CR   +  
Sbjct: 369 RDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVIYTILIQGYCRKGMISV 428

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A++L  E+ ++G  M    Y  ++HGLCK K +  A ++   M      PD    + ++ 
Sbjct: 429 AMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMTERALFPDSYTLTILID 488

Query: 546 KVADDGMTEEAYKLWQKLIEWKV 568
                G  + A +L+QK+ E ++
Sbjct: 489 GHCKLGNLQNAMELFQKMKEKRI 511



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 102/435 (23%), Positives = 209/435 (48%), Gaps = 6/435 (1%)

Query: 137 SKLIDIMARRNQIPDFHFCINLIRGLIR--IDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           S +I I+ R  ++ D   C  L+R + R  + R+E  +  L     + G  D++ +++++
Sbjct: 117 SAMIHILVRSGRLSDAQSC--LLRMIRRSGVSRLEIVNS-LDSTFSNCGSNDSV-FDLLI 172

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
               +  ++R A      +   G    +   N ++ ++   G  + A G +++  R G  
Sbjct: 173 RTYVQARKLREAHEAFTLLRSKGFTVSIDACNALIGSLVRIGWVELAWGVYQEISRSGVG 232

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
             + T  I++  +CK   + +    L  +  +G  PDIVTYN+L++    +G  ++A  +
Sbjct: 233 INVYTLNIMVNALCKDGKMEKVGTFLSQVQEKGVYPDIVTYNTLISAYSSKGLMEEAFEL 292

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +N +  +G  P   TYNT+++ L   G ++   ++   M  +  SP   TY  L+   CK
Sbjct: 293 MNAMPGKGFSPGVYTYNTVINGLCKHGKYERAKEVFAEMLRSGLSPDSTTYRSLLMEACK 352

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G V      F+ M S++  PD+V +++++    + G L++AL   + +  +   P  + 
Sbjct: 353 KGDVVETEKVFSDMRSRDVVPDLVCFSSMMSLFTRSGNLDKALMYFNSVKEAGLIPDNVI 412

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y  LI G  +KG +  AM L  +M++ G + D +T+ T++ G C+   + EA  L  E+ 
Sbjct: 413 YTILIQGYCRKGMISVAMNLRNEMLQQGCAMDVVTYNTILHGLCKRKMLGEADKLFNEMT 472

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           +R     +    ++I G CK   +  A+++ + M   R + D   ++T++      G  +
Sbjct: 473 ERALFPDSYTLTILIDGHCKLGNLQNAMELFQKMKEKRIRLDVVTYNTLLDGFGKVGDID 532

Query: 555 EAYKLWQKLIEWKVF 569
            A ++W  ++  ++ 
Sbjct: 533 TAKEIWADMVSKEIL 547


>gi|357155349|ref|XP_003577091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Brachypodium distachyon]
          Length = 877

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 123/436 (28%), Positives = 218/436 (50%), Gaps = 2/436 (0%)

Query: 135 DASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMM 193
           DA KL D ++A  +   D+  C+ ++RGL     +EK  K+++    +G VP+ + YN++
Sbjct: 242 DARKLYDEMLAEESGADDYSTCV-MVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
           + G C+RG +   I LL EM   G  P V+TY T++  +   G  ++      +   +  
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
           PP +  Y  +I+ +CK    ++A+ VL  M   GC PD +T+++L++  C++G+  +A  
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           ++       + PN  +Y +L+H    RG       +L  M E  H+P V T+  LI+GL 
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
             G V  A+    +M ++   PD   YN ++  LCK+ ML  A  L+  +   +  P   
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            Y TLIDG  +   +++A  ++  M + GI PD + +  +I G+C+   + EAV+ +  +
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTM 600

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            K G       Y  +I G  K   +  A+ +L  M+  R +P+   +S+++      G T
Sbjct: 601 RKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDT 660

Query: 554 EEAYKLWQKLIEWKVF 569
           + A  L+  +    +F
Sbjct: 661 DAAECLFGSMESQGLF 676



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 204/424 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C RG +     L+  M  +  +P       L+  L R   +EK + +L  M  
Sbjct: 298 NVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRE 357

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P+   YN ++  LCK      A+ +L +M   GC+PD IT++T++  +   G+ ++
Sbjct: 358 RRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQE 417

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    ++  R    P L +YT LI   C +  +  A  +L +M   G +PD+VT+ +L++
Sbjct: 418 AERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIH 477

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                G+  +A+LV   + +R + P++  YN L+  L  +    A   +++ M E +  P
Sbjct: 478 GLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHP 537

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             + Y  LI+G  +   +D A   F  M  K   PD+V YN ++   C+ GM+NEA++ +
Sbjct: 538 DKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECM 597

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P   TY TLI G AK+G +  A+ L   MM+    P+ + + +LI G+C+ 
Sbjct: 598 STMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKL 657

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
              + A  L   +  +G       Y ++I  L K  KV  A    E M+ ++  P+D   
Sbjct: 658 GDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTL 717

Query: 541 STIV 544
            ++V
Sbjct: 718 HSLV 721



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 109/408 (26%), Positives = 199/408 (48%), Gaps = 4/408 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGG---VPDTITYNMMVGGLCKRG-QIRSAIALLDEM 213
           L+R L R  R +     L+ M ++G    VP       +V      G + ++A       
Sbjct: 156 LLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQRAR 215

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              G  P     N +LR + +  ++  A   + + L +       +  +++  +C +  +
Sbjct: 216 EHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLV 275

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            + +++++     GC P+ V YN L++  C++G     +L++  + ++G+ P  +TY TL
Sbjct: 276 EKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTL 335

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  LG +G  + +  +L  M E    P V  YN +I+ LCK     +A+    QM +  C
Sbjct: 336 MSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGC 395

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD +T++T++  LC+EG + EA +LL        +P L +Y +LI G   +G +  A  
Sbjct: 396 DPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASN 455

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L  +MME G +PD +T   LI G   A QV EA+ + +++  R      + Y ++I GLC
Sbjct: 456 LLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLC 515

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           K K +  A  ++E M+     PD  V++T++     +   +EA K+++
Sbjct: 516 KKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFE 563



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 111/459 (24%), Positives = 203/459 (44%), Gaps = 19/459 (4%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C     + A  ++  M      PD      LI GL +  R+++A ++L+    
Sbjct: 368 NSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAERLLRETTR 427

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P+  +Y  ++ G C RG++  A  LL EM   G  PDV+T+  ++  +   G+  +
Sbjct: 428 WELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSE 487

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +    +   P    Y +LI  +CK+  +  A  ++++M  +   PD   Y +L++
Sbjct: 488 ALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLID 547

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +    D+A  +   +  +G+ P+ + YN ++      G  +   + +  M +    P
Sbjct: 548 GFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIP 607

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             FTY  LI G  K G +  A++    M+ + CQP++V Y++++   CK G  + A  L 
Sbjct: 608 DEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLF 667

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR- 479
             +      P +ITY  LI  L KK  + +A + +  M+ N  SP+D T  +L+ G C  
Sbjct: 668 GSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNS 727

Query: 480 -----ADQVEEAV---------DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
                +      V         D+ + +       RNSAY  +I  LC    +  A+ + 
Sbjct: 728 MASIISSHCSSTVNLHGKGALLDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLK 787

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             M +  YKPD   F +++      G + E    W+ ++
Sbjct: 788 NKMANKGYKPDSATFLSLLYGFCSVGKSRE----WRTIL 822



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/391 (25%), Positives = 185/391 (47%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A K+   M+      D  +  +MV GLC  G +   + L++    +GC P+ + YN +
Sbjct: 241 DDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGLKLIEARWGAGCVPNAVFYNVL 300

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G   + I    +   KG  P ++TY  L+  + ++  + +   +L +M     
Sbjct: 301 IDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWLGRKGDLEKIASLLSEMRERRL 360

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P++  YNS+++  CK      A++V+  + + G +P++IT++TL+  L   G     ++
Sbjct: 361 PPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDAITFSTLISGLCQEGRVQEAER 420

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L        +P + +Y  LI+G C  G V  A N   +M+ +   PD+VT+  ++  L 
Sbjct: 421 LLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLV 480

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G ++EAL +   +      P    YN LI GL KK  +  A  L  +M+E  + PD  
Sbjct: 481 VAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKY 540

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            + TLI GF R + ++EA  + + + ++G       Y  +I G C+   ++ A++ +  M
Sbjct: 541 VYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTM 600

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                 PD+  ++T++   A  G    A  L
Sbjct: 601 RKVGRIPDEFTYTTLIGGYAKQGNISGALSL 631



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 180/407 (44%), Gaps = 21/407 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
             ++  FC RG++  AS L+  M  R   PD      LI GL+   ++ +A  V + M  
Sbjct: 438 TSLIHGFCVRGEVIVASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAA 497

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
              +PD   YN+++ GLCK+  + +A  L++EM      PD   Y T++     N    +
Sbjct: 498 RQLLPDANIYNVLISGLCKKKMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDE 557

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   ++   +KG  P ++ Y  +I+  C+   +  A+E +  M   G  PD  TY +L+ 
Sbjct: 558 ARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIG 617

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              KQG    A+ ++ +++ R  +PN + Y++L++     G  DA + +   M      P
Sbjct: 618 GYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFP 677

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK----------- 409
            V TY ILI  L K   V RA   F  M+   C P+  T ++++  LC            
Sbjct: 678 NVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCS 737

Query: 410 -------EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
                  +G L   L +   L    C P    YN +I  L     + +A+ L  +M   G
Sbjct: 738 STVNLHGKGAL---LDIFRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKG 794

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
             PD  T  +L++GFC   +  E   +L    +R      S Y+++ 
Sbjct: 795 YKPDSATFLSLLYGFCSVGKSREWRTILPNEFQRDELEVASRYKILF 841



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 114/475 (24%), Positives = 211/475 (44%), Gaps = 35/475 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++   C  G++ +A +L+    R    P+     +LI G      +  AS +L
Sbjct: 398 DAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLL 457

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PD +T+  ++ GL   GQ+  A+ + ++M+     PD   YN ++  +   
Sbjct: 458 VEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKK 517

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A    ++ L +   P    YT LI+   +   +  A ++ + M  +G  PD+V Y
Sbjct: 518 KMLPAARNLIEEMLEQNVHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGY 577

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++   C+ G  ++AV  ++ +   G  P+  TY TL+     +G       +L  M +
Sbjct: 578 NAMIKGYCQFGMMNEAVECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMK 637

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V  Y+ LING CK G  D A   F  M S+   P+++TY  ++G+L K+  +  
Sbjct: 638 RRCQPNVVAYSSLINGYCKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVR 697

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAK------------------KGCMEKAMVLYGQ 457
           A      +  + CSP   T ++L+ GL                    KG +   + ++  
Sbjct: 698 AAMYFEYMLLNQCSPNDYTLHSLVTGLCNSMASIISSHCSSTVNLHGKGAL---LDIFRA 754

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           ++ +   P +  +  +I+  C  + + EA+DL  ++  +G K  ++ +  +++G C   K
Sbjct: 755 LVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCSVGK 814

Query: 518 -------VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                  +    Q  EL ++SRYK    +F   V K     +  E Y ++Q  +E
Sbjct: 815 SREWRTILPNEFQRDELEVASRYK---ILFDQYVVK----SVGCEVYSVFQLYLE 862



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 179/376 (47%), Gaps = 4/376 (1%)

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVIT---YNTILRTMFDNG-KFKQAIGFWKDQLRKG 252
           L + G+  +  A L +MS++G    V T      ++ T  D G + K A    + +   G
Sbjct: 160 LARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQRAREHHG 219

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P       L+  + ++     A ++ D+M  E    D  +   +V   C +G  +  +
Sbjct: 220 TLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLEGLVEKGL 279

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            +I      G  PN++ YN L+     RG       +L  M      PTV TY  L++ L
Sbjct: 280 KLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTYGTLMSWL 339

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
            + G +++  +  ++M  +   P++  YN+V+ ALCK    ++AL +L  +    C P  
Sbjct: 340 GRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFAGGCDPDA 399

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           IT++TLI GL ++G +++A  L  +     ++P+  ++ +LI GFC   +V  A +LL E
Sbjct: 400 ITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIVASNLLVE 459

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + +RG+      +  +IHGL  + +V  A+ V E M + +  PD  +++ ++  +    M
Sbjct: 460 MMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKMAARQLLPDANIYNVLISGLCKKKM 519

Query: 553 TEEAYKLWQKLIEWKV 568
              A  L ++++E  V
Sbjct: 520 LPAARNLIEEMLEQNV 535



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 153/343 (44%), Gaps = 4/343 (1%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI---ARAIEVLD 281
           ++ +LR +   G+F       +D    G    + T   L   V         A+A E+  
Sbjct: 153 HSALLRLLARAGRFDAVDATLRDMSLAGAAAAVPTRACLGALVATYADAGMEAKAAEMCQ 212

Query: 282 DM-AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
                 G  P     N L+    ++ ++DDA  + + +L+     +  +   ++  L   
Sbjct: 213 RAREHHGTLPGATHTNRLLRLLVERRRWDDARKLYDEMLAEESGADDYSTCVMVRGLCLE 272

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G  +   K+++    A   P    YN+LI+G C+ G V R I    +M +K   P +VTY
Sbjct: 273 GLVEKGLKLIEARWGAGCVPNAVFYNVLIDGYCRRGDVGRGILLLGEMEAKGLLPTVVTY 332

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
            T++  L ++G L +   LL  +      P +  YN++ID L K     +A+V+  QM  
Sbjct: 333 GTLMSWLGRKGDLEKIASLLSEMRERRLPPNVQIYNSVIDALCKCRSASQALVVLKQMFA 392

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G  PD IT  TLI G C+  +V+EA  LL+E  +       S+Y  +IHG C   +V +
Sbjct: 393 GGCDPDAITFSTLISGLCQEGRVQEAERLLRETTRWELNPNLSSYTSLIHGFCVRGEVIV 452

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           A  +L  M+   + PD   F  ++  +   G   EA  + +K+
Sbjct: 453 ASNLLVEMMERGHTPDVVTFGALIHGLVVAGQVSEALLVREKM 495



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 82/306 (26%), Positives = 138/306 (45%), Gaps = 26/306 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D+     ++  F     L +A K+ + M ++   PD      +I+G  +   + +A 
Sbjct: 535 VHPDKYVYTTLIDGFIRNESLDEARKIFEFMEQKGIHPDVVGYNAMIKGYCQFGMMNEAV 594

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           + +  M   G +PD  TY  ++GG  K+G I  A++LL +M    C+P+V+ Y++++   
Sbjct: 595 ECMSTMRKVGRIPDEFTYTTLIGGYAKQGNISGALSLLCDMMKRRCQPNVVAYSSLINGY 654

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A   +     +G  P +ITYTILI  + K+  + RA    + M +  CSP+ 
Sbjct: 655 CKLGDTDAAECLFGSMESQGLFPNVITYTILIGSLFKKDKVVRAAMYFEYMLLNQCSPND 714

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T +SLV   C            N++ S      S T N  LH  G+         +LDI
Sbjct: 715 YTLHSLVTGLC------------NSMASIISSHCSSTVN--LHGKGA---------LLDI 751

Query: 353 MNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
                +    P    YN +I  LC + ++  A++  N+M +K  +PD  T+ ++L   C 
Sbjct: 752 FRALVNDRCDPRNSAYNAIIFSLCIHNMLGEALDLKNKMANKGYKPDSATFLSLLYGFCS 811

Query: 410 EGMLNE 415
            G   E
Sbjct: 812 VGKSRE 817


>gi|225189439|emb|CAR70003.1| pentatricopeptide repeat(PPR)-containing protein At1g12700
           [Arabidopsis thaliana]
          Length = 602

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 208/395 (52%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  VL  ++  G  PDT T+N ++ GLC  G++  A+ L+D M  +GC+PD++TYN+I+ 
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVN 201

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +  +G    A    +    +     + TY+ +I+ +C+   I  AI +  +M  +G   
Sbjct: 202 GICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            +VTYNSLV   CK GK++D  L++ +++SR + PN IT+N LL      G     +++ 
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M     SP + TYN L++G C    +  A N  + MV   C PDIVT+ +++   C  
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             +++ +++   ++        +TY+ L+ G  + G ++ A  L+ +M+ +G+ PD +T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             L+ G C   ++E+A+++ +++ K    +    Y  +I G+CK  KV+ A  +   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              KP+   ++ ++  +   G   EA  L +K+ E
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 127/404 (31%), Positives = 198/404 (49%), Gaps = 4/404 (0%)

Query: 113 VEN----DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           VEN    D  T N I+   C  G  + A  ++  M  RN   D      +I  L R   I
Sbjct: 185 VENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A  + + M   G     +TYN +V GLCK G+      LL +M      P+VIT+N +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L      GK ++A   +K+ + +G  P +ITY  L++  C Q  ++ A  +LD M    C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           SPDIVT+ SL+   C   + DD + V  N+  RG+  N++TY+ L+      G     ++
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M      P V TY IL++GLC  G +++A+  F  +        IV Y T++  +C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G + +A  L   L      P ++TY  +I GL KKG + +A +L  +M E+G +P+D 
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           T+ TLI    R   +  +  L++E+   G     S+ ++VI  L
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 219/445 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC   K   A  ++  + +    PD      LI GL    ++ KA  ++  M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRM 184

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V +G  PD +TYN +V G+C+ G    A  +L +M     + DV TY+TI+ ++  +G  
Sbjct: 185 VENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI  +K+   KG    ++TY  L+  +CK         +L DM      P+++T+N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK  +A  +   +++RG+ PN ITYNTL+     +      + +LD+M     
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP + T+  LI G C    VD  +  F  +  +    + VTY+ ++   C+ G +  A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P ++TY  L+DGL   G +EKA+ ++  + ++ +    + + T+I G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +VE+A +L   +  +G K     Y ++I GLCK   +  A  +L  M      P+D 
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++T+++    DG    + KL +++
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 113/408 (27%), Positives = 207/408 (50%), Gaps = 1/408 (0%)

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
           G++ I + + A  + Q M+ S  +P  + ++     + +  Q    +    ++ ++G   
Sbjct: 63  GIVDIKK-DDAIALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAH 121

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           ++ T N ++       K   A       ++ G  P   T+  LI  +C +  +++A+ ++
Sbjct: 122 NIYTLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLV 181

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           D M   GC PD+VTYNS+VN  C+ G    A  ++  +  R ++ +  TY+T++ SL   
Sbjct: 182 DRMVENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRD 241

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           GC DA   +   M       +V TYN L+ GLCK G  +        MVS+   P+++T+
Sbjct: 242 GCIDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITF 301

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N +L    KEG L EA +L   +     SP +ITYNTL+DG   +  + +A  +   M+ 
Sbjct: 302 NVLLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVR 361

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           N  SPD +T  +LI G+C   +V++ + + + I KRG       Y +++ G C+S K+ +
Sbjct: 362 NKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKL 421

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           A ++ + M+S    PD   +  ++  + D+G  E+A ++++ L + K+
Sbjct: 422 AEELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKM 469



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/431 (26%), Positives = 214/431 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++   C  GK++ A  L+D M      PD     +++ G+ R      A  
Sbjct: 155 EPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPDMVTYNSIVNGICRSGDTSLAFD 214

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ M       D  TY+ ++  LC+ G I +AI+L  EM   G +  V+TYN+++R + 
Sbjct: 215 MLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK+       KD + +   P +IT+ +L++   K+  +  A E+  +M   G SP+I+
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L++  C Q +  +A  +++ ++     P+ +T+ +L+         D   K+   +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           ++        TY+IL+ G C+ G +  A   F +MVS    PD++TY  +L  LC  G L
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +AL++   L  S     ++ Y T+I+G+ K G +E A  L+  +   G+ P+ +T+  +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+   + EA  LL+++ + GN   +  Y  +I    +   +  + +++E M S  +
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574

Query: 534 KPDDTVFSTIV 544
             D +    ++
Sbjct: 575 SADASSIKMVI 585



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/435 (25%), Positives = 225/435 (51%), Gaps = 6/435 (1%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTI 188
           K  DA  L   M R   +P     ++  R    I R ++ + VL     + ++G   +  
Sbjct: 68  KKDDAIALFQEMIRSRPLPGL---VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY 124

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T N+M+   C+  +   A ++L ++   G EPD  T+NT++  +   GK  +A+      
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRM 184

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  GC P ++TY  ++  +C+    + A ++L  M       D+ TY+++++  C+ G  
Sbjct: 185 VENGCQPDMVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           D A+ +   + ++G++ + +TYN+L+  L   G W+    +L  M      P V T+N+L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           ++   K G +  A   + +M+++   P+I+TYNT++   C +  L+EA  +L L+  + C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           SP ++T+ +LI G      ++  M ++  + + G+  + +T+  L+ GFC++ +++ A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L +E+   G       Y +++ GLC + K++ A+++ E +  S+      +++TI++ + 
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 549 DDGMTEEAYKLWQKL 563
             G  E+A+ L+  L
Sbjct: 485 KGGKVEDAWNLFCSL 499



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/376 (25%), Positives = 182/376 (48%), Gaps = 12/376 (3%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV-------ITYNTILRTMFDNGKFKQA 241
            + M+   L K G +R+ +       +S CE D        + +   LR+   + K   A
Sbjct: 13  AFRMVQPHLLKTGTLRTDLLCTISSFLSSCERDFSSITNGNVCFRERLRSGIVDIKKDDA 72

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           I  +++ +R    P L+ ++     + +       ++    + + G + +I T N ++N 
Sbjct: 73  IALFQEMIRSRPLPGLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINC 132

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+  K   A  V+  ++  G EP++ T+NTL++ L   G       ++D M E    P 
Sbjct: 133 FCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLINGLCLEGKVSKAVVLVDRMVENGCQPD 192

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + TYN ++NG+C+ G    A +   +M  +N + D+ TY+T++ +LC++G ++ A+ L  
Sbjct: 193 MVTYNSIVNGICRSGDTSLAFDMLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFK 252

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +        ++TYN+L+ GL K G      +L   M+   I P+ IT   L+  F +  
Sbjct: 253 EMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEG 312

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +++EA +L KE+  RG       Y  ++ G C   ++  A  +L+LM+ ++  PD   F+
Sbjct: 313 KLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFT 372

Query: 542 TIVK-----KVADDGM 552
           +++K     K  DDGM
Sbjct: 373 SLIKGYCMVKRVDDGM 388



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 145/272 (53%), Gaps = 4/272 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C + +L++A+ ++D+M R    PD     +LI+G   + R++   KV + +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G V + +TY+++V G C+ G+I+ A  L  EM   G  PDV+TY  +L  + DNGK 
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+  ++D  +      ++ YT +IE +CK   +  A  +   +  +G  P+++TY  +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G   +A +++  +   G  PN  TYNTL+ +    G   A  K+++ M     
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           S    +  ++I+ L   G +D+   SF  M+S
Sbjct: 575 SADASSIKMVIDMLLS-GELDK---SFLDMLS 602



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 158/329 (48%), Gaps = 2/329 (0%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVE--NDEKTNNKILQNFCSRGKLTDASK 138
           +S V+  N  +RGL    K +D +L   D    E   +  T N +L  F   GKL +A++
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L   M  R   P+      L+ G    +R+ +A+ +L +MV +   PD +T+  ++ G C
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
              ++   + +   +S  G   + +TY+ +++    +GK K A   +++ +  G  P ++
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY IL++ +C    + +A+E+ +D+        IV Y +++   CK GK +DA  +  +L
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             +G++PN +TY  ++  L  +G     + +L  M E  ++P   TYN LI    + G +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
             +     +M S     D  +   V+  L
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDML 588


>gi|110741592|dbj|BAE98744.1| PPR-repeat protein [Arabidopsis thaliana]
          Length = 548

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 226/447 (50%), Gaps = 6/447 (1%)

Query: 132 KLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           KL DA  L   M +    P   DF+  ++ I  L + D +    K ++++   G   D  
Sbjct: 65  KLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVL---GIRNDLY 121

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T+N+++   C   Q+  A+++L +M   G EPD +T  +++       +   A+      
Sbjct: 122 TFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDKM 181

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  G  P ++ Y  +I+ +CK   +  A +   ++  +G  P++VTY +LVN  C   ++
Sbjct: 182 VEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSRW 241

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            DA  ++++++ + + PN ITY+ LL +    G      ++ + M   S  P + TY+ L
Sbjct: 242 SDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSSL 301

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           +NGLC +  +D A   F+ MVSK C  D+V+YNT++   CK   + + ++L   ++    
Sbjct: 302 VNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRGL 361

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
               +TYNTLI G  + G ++KA   + QM   GISPD  T+  L+ G C   ++E+A+ 
Sbjct: 362 VSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKALV 421

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           + +++ KR   +    Y  VI G+CK+ KV+ A  +   +     KPD   ++T++  + 
Sbjct: 422 IFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTTMMSGLC 481

Query: 549 DDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             G+  E   L+ K+ +  + +   TL
Sbjct: 482 TKGLLHEVEALYTKMKQEGLMKNDCTL 508



 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 113/356 (31%), Positives = 182/356 (51%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   ++  FC R +++DA  L+D M      PD      +I  L +  R+  A  
Sbjct: 152 EPDRVTIGSLVNGFCRRNRVSDAVSLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFD 211

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
             + +   G  P+ +TY  +V GLC   +   A  LL +M      P+VITY+ +L    
Sbjct: 212 FFKEIERKGIRPNVVTYTALVNGLCNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFV 271

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            NGK  +A   +++ +R    P ++TY+ L+  +C    I  A ++ D M  +GC  D+V
Sbjct: 272 KNGKVLEAKELFEEMVRMSIDPDIVTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVV 331

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN+L+N  CK  + +D + +   +  RG+  N++TYNTL+      G  D   +    M
Sbjct: 332 SYNTLINGFCKAKRVEDGMKLFREMSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +    SP ++TYNIL+ GLC  G +++A+  F  M  +    DIVTY TV+  +CK G +
Sbjct: 392 DFFGISPDIWTYNILLGGLCDNGELEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKV 451

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            EA  L   L+     P ++TY T++ GL  KG + +   LY +M + G+  +D T
Sbjct: 452 EEAWSLFCSLSLKGLKPDIVTYTTMMSGLCTKGLLHEVEALYTKMKQEGLMKNDCT 507



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 112/385 (29%), Positives = 193/385 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + ND  T N ++  FC   +++ A  ++  M +    PD     +L+ G  R +R+  A 
Sbjct: 116 IRNDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAV 175

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PD + YN ++  LCK  ++  A     E+   G  P+V+TY  ++  +
Sbjct: 176 SLVDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGL 235

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            ++ ++  A     D ++K   P +ITY+ L++   K   +  A E+ ++M      PDI
Sbjct: 236 CNSSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDI 295

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY+SLVN  C   + D+A  + + ++S+G   + ++YNTL++        +   K+   
Sbjct: 296 VTYSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFRE 355

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M++        TYN LI G  + G VD+A   F+QM      PDI TYN +LG LC  G 
Sbjct: 356 MSQRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGE 415

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L +AL +   +        ++TY T+I G+ K G +E+A  L+  +   G+ PD +T+ T
Sbjct: 416 LEKALVIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSLSLKGLKPDIVTYTT 475

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           ++ G C    + E   L  ++ + G
Sbjct: 476 MMSGLCTKGLLHEVEALYTKMKQEG 500



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 109/401 (27%), Positives = 202/401 (50%)

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
           +R  ++  A  +   MV S   P  + +N ++  + K  +    I+L  +M V G   D+
Sbjct: 61  LRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIRNDL 120

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            T+N ++       +   A+      L+ G  P  +T   L+   C++  ++ A+ ++D 
Sbjct: 121 YTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSLVDK 180

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G  PDIV YN++++  CK  + +DA      +  +G+ PN +TY  L++ L +   
Sbjct: 181 MVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCNSSR 240

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           W    ++L  M +   +P V TY+ L++   K G V  A   F +MV  +  PDIVTY++
Sbjct: 241 WSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVTYSS 300

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LC    ++EA Q+  L+    C   +++YNTLI+G  K   +E  M L+ +M + G
Sbjct: 301 LVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMSQRG 360

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +  + +T+ TLI GF +A  V++A +   ++   G       Y +++ GLC + +++ A+
Sbjct: 361 LVSNTVTYNTLIQGFFQAGDVDKAQEFFSQMDFFGISPDIWTYNILLGGLCDNGELEKAL 420

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            + E M       D   ++T+++ +   G  EEA+ L+  L
Sbjct: 421 VIFEDMQKREMDLDIVTYTTVIRGMCKTGKVEEAWSLFCSL 461



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 80/334 (23%), Positives = 165/334 (49%)

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           +T   + K   AI  + D ++    P ++ +  L+  + K       I +   M + G  
Sbjct: 58  KTRLRDIKLNDAIDLFSDMVKSRPFPSIVDFNRLLSAIVKLKKYDVVISLGKKMEVLGIR 117

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            D+ T+N ++N  C   +   A+ ++  +L  G EP+ +T  +L++    R        +
Sbjct: 118 NDLYTFNIVINCFCCCFQVSLALSILGKMLKLGYEPDRVTIGSLVNGFCRRNRVSDAVSL 177

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           +D M E  + P +  YN +I+ LCK   V+ A + F ++  K  +P++VTY  ++  LC 
Sbjct: 178 VDKMVEIGYKPDIVAYNAIIDSLCKTKRVNDAFDFFKEIERKGIRPNVVTYTALVNGLCN 237

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
               ++A +LL  +     +P +ITY+ L+D   K G + +A  L+ +M+   I PD +T
Sbjct: 238 SSRWSDAARLLSDMIKKKITPNVITYSALLDAFVKNGKVLEAKELFEEMVRMSIDPDIVT 297

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +L+ G C  D+++EA  +   +  +G      +Y  +I+G CK+K+V+  +++   M 
Sbjct: 298 YSSLVNGLCLHDRIDEANQMFDLMVSKGCLADVVSYNTLINGFCKAKRVEDGMKLFREMS 357

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                 +   ++T+++     G  ++A + + ++
Sbjct: 358 QRGLVSNTVTYNTLIQGFFQAGDVDKAQEFFSQM 391


>gi|296089773|emb|CBI39592.3| unnamed protein product [Vitis vinifera]
          Length = 577

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 207/397 (52%), Gaps = 3/397 (0%)

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           S G  ++I  +M+V    K G++  A+   D     G     ++ N +L ++   G+   
Sbjct: 153 SWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPMLVSLVKEGRIGV 212

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               +K+ +R+     ++T+ ++I  +CK     +A +V++DM   G SP ++TYN++++
Sbjct: 213 VESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIID 272

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK GK   A  ++  ++++ + PN IT+N L+          A  K+ + M      P
Sbjct: 273 GYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQP 332

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN LINGLC  G +D A+   ++M     +P++VTYN ++   CK+ ML EA ++L
Sbjct: 333 NVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREML 392

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +     +P +IT+NTLID   K G M+ A +L   M++ G+ P+  T+  LI GFCR 
Sbjct: 393 DDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCRE 452

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE---LMISSRYKPDD 537
             V+EA  L KE+   G K     Y +++  LCK  +   A+++L+   LM     + + 
Sbjct: 453 GNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANI 512

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             ++ ++K   + G  EEA +L  +++E  +    TT
Sbjct: 513 VTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTT 549



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 111/346 (32%), Positives = 188/346 (54%), Gaps = 3/346 (0%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  ++  L++  RI     V + M+      + +T+++++ GLCK G+ + A  ++++M 
Sbjct: 197 CNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMK 256

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G  P VITYNTI+      GK  +A    K+ + K   P  IT+ ILI+  C+   + 
Sbjct: 257 AWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVT 316

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A +V ++M  +G  P++VTYNSL+N  C  GK D+A+ + + +   G++PN +TYN L+
Sbjct: 317 AAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALI 376

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           +    +       ++LD + +   +P V T+N LI+   K G +D A    + M+     
Sbjct: 377 NGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVC 436

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P++ TYN ++   C+EG + EA +L   + G+     L+TYN L+D L KKG   KA+ L
Sbjct: 437 PNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRL 496

Query: 455 YGQMM---ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
             +M    + G   + +T+  LI GFC   ++EEA  LL E+ ++G
Sbjct: 497 LDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKG 542



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 99/327 (30%), Positives = 168/327 (51%), Gaps = 3/327 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  GK   A  +++ M      P       +I G  +  ++ KA  +L+ MV   
Sbjct: 235 VINGLCKVGKFQKAGDVVEDMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKR 294

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ IT+N+++ G C+   + +A  + +EM   G +P+V+TYN+++  +  NGK  +A+
Sbjct: 295 IHPNEITFNILIDGFCRDENVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEAL 354

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G        G  P ++TY  LI   CK+  +  A E+LDD+   G +P+++T+N+L++  
Sbjct: 355 GLQDKMSGMGLKPNVVTYNALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAY 414

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K G+ DDA L+ + +L  G+ PN  TYN L+      G      K+   M        +
Sbjct: 415 GKAGRMDDAFLLRSMMLDTGVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADL 474

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMV---SKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
            TYNIL++ LCK G   +A+   ++M     K  + +IVTYN ++   C +G L EA +L
Sbjct: 475 VTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRL 534

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKG 446
           L+ +      P   TY+ L D + +KG
Sbjct: 535 LNEMLEKGLIPNRTTYDILRDEMMEKG 561



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 189/369 (51%), Gaps = 3/369 (0%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            ++ N M+  L K G+I    ++  EM       +V+T++ ++  +   GKF++A    +
Sbjct: 194 ALSCNPMLVSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVE 253

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           D    G  P +ITY  +I+  CK   + +A  +L +M  +   P+ +T+N L++  C+  
Sbjct: 254 DMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
               A  V   +  +G++PN +TYN+L++ L S G  D    + D M+     P V TYN
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYN 373

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LING CK  ++  A    + +  +   P+++T+NT++ A  K G +++A  L  ++  +
Sbjct: 374 ALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P + TYN LI G  ++G +++A  L  +M  NG+  D +T+  L+   C+  +  +A
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493

Query: 487 VDLLKEIG---KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           V LL E+    K+G +     Y ++I G C   K++ A ++L  M+     P+ T +  +
Sbjct: 494 VRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553

Query: 544 VKKVADDGM 552
             ++ + G 
Sbjct: 554 RDEMMEKGF 562



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 152/299 (50%), Gaps = 5/299 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N I+  +C  GK+  A  L+ +++A+R    +  F I LI G  R + +  A KV + 
Sbjct: 266 TYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNI-LIDGFCRDENVTAAKKVFEE 324

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+ +TYN ++ GLC  G++  A+ L D+MS  G +P+V+TYN ++        
Sbjct: 325 MQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCKKKM 384

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            K+A     D  ++G  P +IT+  LI+   K   +  A  +   M   G  P++ TYN 
Sbjct: 385 LKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDTGVCPNVSTYNC 444

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD---IMN 354
           L+   C++G   +A  +   +   G++ + +TYN L+ +L  +G      ++LD   +M 
Sbjct: 445 LIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLME 504

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +      + TYN+LI G C  G ++ A    N+M+ K   P+  TY+ +   + ++G +
Sbjct: 505 KKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFI 563



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 146/310 (47%), Gaps = 5/310 (1%)

Query: 74  DQDEWSSESHVLAVNKKLRGLTITKK--SHDPSLPSSDGPFVENDEKTNNKILQNFCSRG 131
           D   W     V+  N  + G     K    D  L       +  +E T N ++  FC   
Sbjct: 254 DMKAWGFSPSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDE 313

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
            +T A K+ + M R+   P+     +LI GL    ++++A  +   M   G  P+ +TYN
Sbjct: 314 NVTAAKKVFEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYN 373

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            ++ G CK+  ++ A  +LD++   G  P+VIT+NT++      G+   A       L  
Sbjct: 374 ALINGFCKKKMLKEAREMLDDIGKRGLAPNVITFNTLIDAYGKAGRMDDAFLLRSMMLDT 433

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P + TY  LI   C++  +  A ++  +M   G   D+VTYN LV+  CK+G+   A
Sbjct: 434 GVCPNVSTYNCLIVGFCREGNVKEARKLAKEMEGNGLKADLVTYNILVDALCKKGETRKA 493

Query: 312 VLVINNLL---SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           V +++ +     +G   N +TYN L+    ++G  +  +++L+ M E    P   TY+IL
Sbjct: 494 VRLLDEMTLMEKKGRRANIVTYNVLIKGFCNKGKLEEANRLLNEMLEKGLIPNRTTYDIL 553

Query: 369 INGLCKYGLV 378
            + + + G +
Sbjct: 554 RDEMMEKGFI 563



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 66/250 (26%), Positives = 118/250 (47%), Gaps = 21/250 (8%)

Query: 331 NTLLHSLGSRGCWDAVDKIL---------------------DIMNEASHSPTVFTYNILI 369
           +T+ HSL   G W   + I+                     D   +     +  + N ++
Sbjct: 142 STIFHSLSVLGSWGCANSIIVDMLVWAYVKNGEMDLALEGFDRAGDYGFRLSALSCNPML 201

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
             L K G +    + + +M+ +    ++VT++ V+  LCK G   +A  ++  +     S
Sbjct: 202 VSLVKEGRIGVVESVYKEMIRRRIGVNVVTFDVVINGLCKVGKFQKAGDVVEDMKAWGFS 261

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P +ITYNT+IDG  K G M KA  L  +M+   I P++IT   LI GFCR + V  A  +
Sbjct: 262 PSVITYNTIIDGYCKAGKMFKADALLKEMVAKRIHPNEITFNILIDGFCRDENVTAAKKV 321

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            +E+ ++G +     Y  +I+GLC + K+D A+ + + M     KP+   ++ ++     
Sbjct: 322 FEEMQRQGLQPNVVTYNSLINGLCSNGKLDEALGLQDKMSGMGLKPNVVTYNALINGFCK 381

Query: 550 DGMTEEAYKL 559
             M +EA ++
Sbjct: 382 KKMLKEAREM 391



 Score = 40.8 bits (94), Expect = 2.0,   Method: Compositional matrix adjust.
 Identities = 29/114 (25%), Positives = 58/114 (50%), Gaps = 9/114 (7%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIM------ARRNQIPDFHFCINLIRGL 162
           +G  ++ D  T N ++   C +G+   A +L+D M       RR  I  ++    LI+G 
Sbjct: 466 EGNGLKADLVTYNILVDALCKKGETRKAVRLLDEMTLMEKKGRRANIVTYNV---LIKGF 522

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
               ++E+A+++L  M+  G +P+  TY+++   + ++G I      L  +S+S
Sbjct: 523 CNKGKLEEANRLLNEMLEKGLIPNRTTYDILRDEMMEKGFIPDIDGHLYNVSIS 576


>gi|115471647|ref|NP_001059422.1| Os07g0300200 [Oryza sativa Japonica Group]
 gi|34394343|dbj|BAC84898.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|50509027|dbj|BAD31989.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113610958|dbj|BAF21336.1| Os07g0300200 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 223/446 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +   G++ DA++++ +M  R   P    C  L++ L+R D +    KV + MV +G
Sbjct: 180 LVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 239

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY+ ++   CK  +  +A  +L EM   GC  + +TYN ++  +  +G  ++A 
Sbjct: 240 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 299

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           GF KD    G  P   TY  LI  +CK      A  +LD+M+     P++V Y +L++  
Sbjct: 300 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 359

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            ++G  D+A  +I  +++ G++PN ITY+ L+  L   G  D    +L  M   SH P  
Sbjct: 360 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 419

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN++I G  ++     A    ++M +    P++ TY+ ++  LC+ G   +A  LL  
Sbjct: 420 ITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 479

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P    Y  LI G  ++G +  A  ++ +M +  + PD   + +LI+G  +  +
Sbjct: 480 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 539

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEE+     ++ +RG       Y  +IHG  K+  ++ A Q+++ M+ +  KP+D ++  
Sbjct: 540 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 599

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           +++        E+    ++ +++  V
Sbjct: 600 LLESYFKSDDIEKVSSTFKSMLDQGV 625



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 221/455 (48%), Gaps = 2/455 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASK-LIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           G  +  D  T + +++ +C   +   A K L+++  R   +    + + LI GL R   +
Sbjct: 237 GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNV-LIAGLCRSGAV 295

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E+A    + M   G VPD  TY  ++ GLCK  +   A ALLDEMS +  +P+V+ Y  +
Sbjct: 296 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 355

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G   +A    K+ +  G  P  ITY  L+  +CK   + RA  +L  M  +  
Sbjct: 356 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 415

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD +TYN ++    +     DA  +++ + + G+ PN  TY+ ++H L   G  +    
Sbjct: 416 RPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 475

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L+ M      P  F Y  LI+G C+ G V  A   F++M   N  PD+  YN+++  L 
Sbjct: 476 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 535

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G + E+ +    +      P   TY+ LI G  K G +E A  L  +M++ G+ P+D+
Sbjct: 536 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDV 595

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            +  L+  + ++D +E+     K +  +G  + N  Y ++IH L  S  ++ A +VL  +
Sbjct: 596 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGI 655

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             +   PD  V+S+++  +      E+A+ +  ++
Sbjct: 656 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 690



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 230/511 (45%), Gaps = 71/511 (13%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   G   +A K+I  M      P+     NL+RGL ++ ++++AS +L+ MV   
Sbjct: 355 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 414

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PDTITYN+++ G  +    + A  LL EM  +G  P+V TY+ ++  +  +G+ ++A 
Sbjct: 415 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 474

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV--- 299
              ++   KG  P    Y  LI   C++  ++ A E+ D M      PD+  YNSL+   
Sbjct: 475 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 534

Query: 300 ------------------------NFS--------CKQGKYDDAVLVINNLLSRGMEPNS 327
                                    F+         K G  + A  ++  +L  G++PN 
Sbjct: 535 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 594

Query: 328 ITY-----------------------------------NTLLHSLGSRGCWDAVDKILDI 352
           + Y                                     L+H+L S G  +A  ++L  
Sbjct: 595 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 654

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + +    P V  Y+ LI+GLCK    ++A    ++M  K   P+IV YN ++  LCK G 
Sbjct: 655 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 714

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ A  + + +      P  +TY +LIDG  K G +  A  LY +M+  GI+PD   +  
Sbjct: 715 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 774

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L  G   A  +E+A+ L++E+  RG+    S++  ++ G CK  K+   +++L +++   
Sbjct: 775 LTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 833

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             P+      I+  +++ G   E + ++ +L
Sbjct: 834 LVPNALTIENIISGLSEAGKLSEVHTIFVEL 864



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 212/460 (46%), Gaps = 22/460 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C   +  +A  L+D M+     P+     NLI G +R    ++A K++
Sbjct: 313 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 372

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV +G  P+ ITY+ +V GLCK GQ+  A  LL +M      PD ITYN I+   F +
Sbjct: 373 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 432

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              K A     +    G  P + TY+I+I  +C+     +A ++L++M  +G  P+   Y
Sbjct: 433 HSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 492

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L++  C++G    A  + + +    + P+   YN+L+  L   G  +   K    M E
Sbjct: 493 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 552

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK------ 409
               P  FTY+ LI+G  K G ++ A     +M+    +P+ V Y  +L +  K      
Sbjct: 553 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 612

Query: 410 -----EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
                + ML++ + L + +           Y  LI  L+  G ME A  +   + +NG  
Sbjct: 613 VSSTFKSMLDQGVMLDNRI-----------YGILIHNLSSSGNMEAAFRVLSGIEKNGSV 661

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD   + +LI G C+    E+A  +L E+ K+G       Y  +I GLCKS  +  A  V
Sbjct: 662 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 721

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              +++    P+   +++++      G    A+ L+ +++
Sbjct: 722 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 761



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 209/460 (45%), Gaps = 56/460 (12%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C  G ++ A ++ D M + N +PD +   +LI GL ++ R+E+++K    M   G
Sbjct: 495 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 554

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +P+  TY+ ++ G  K G + SA  L+  M  +G +P+ + Y  +L + F +   ++  
Sbjct: 555 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 614

Query: 243 GFWKDQL-----------------------------------RKGCPPYLITYTILIEQV 267
             +K  L                                   + G  P +  Y+ LI  +
Sbjct: 615 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 674

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CK     +A  +LD+M+ +G  P+IV YN+L++  CK G    A  V N++L++G+ PN 
Sbjct: 675 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 734

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +TY +L+      G       + + M     +P  F Y++L  G    G +++A+    +
Sbjct: 735 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 794

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M  +     I ++N ++   CK G + E L+LLH++ G    P  +T   +I GL++ G 
Sbjct: 795 MFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 853

Query: 448 MEKAMV-------------------LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           + +                      L+  M+  G  P D+    +I   C+   +++A+ 
Sbjct: 854 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVD-DMIRDHCKEGNLDKALM 912

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           L   I  +   M  S+Y  ++  LC+  K+  A+ +L+ M
Sbjct: 913 LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 952



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 3/217 (1%)

Query: 353 MNEASH-SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           ++++ H SP V   ++L++   K G V  A      M  +   P I   N +L  L +  
Sbjct: 166 LSDSGHRSPAVL--DVLVDTYKKSGRVQDAAEVVLMMRDRGMAPSIRCCNALLKDLLRAD 223

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +    ++   + G+  SP + TY+TLI+   K    + A  +  +M E G   + +T+ 
Sbjct: 224 AMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYN 283

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            LI G CR+  VEEA    K++   G       Y  +I+GLCKS++ + A  +L+ M  +
Sbjct: 284 VLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCA 343

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             KP+  V++ ++     +G  +EA+K+ ++++   V
Sbjct: 344 ELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 380


>gi|414874052|tpg|DAA52609.1| TPA: hypothetical protein ZEAMMB73_367214 [Zea mays]
          Length = 716

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 126/465 (27%), Positives = 228/465 (49%), Gaps = 4/465 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTD-ASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           + GP V +       IL + C+R    + A      + R     D     +L++G     
Sbjct: 105 AQGPRVLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAK 164

Query: 167 RIEKASKVLQIMVMS-GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVI 223
           R ++A  +L       G VPD  +Y++++  LC +G+   A  LL  M+  G  C PDV+
Sbjct: 165 RTDEALDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVV 224

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
            Y T++   F  G   +A   +K+ +++G PP L+TY+ ++  +CK   + +A   L  M
Sbjct: 225 AYTTVIDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQM 284

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             +G  PD  TYN+L+      G++ +AV V   +    + P+ +T N L+ SL   G  
Sbjct: 285 VNKGVLPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKI 344

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
                + D M     +P VF+Y I++NG    G +    + F+ M+     PDI T++ +
Sbjct: 345 KEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVL 404

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + A    GML++A+ + + +      P ++TY T+I  L + G M+ AM  + QM++ G+
Sbjct: 405 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGV 464

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           +PD   +  LI GFC    + +A +L+ EI   G ++    +  +I+ LCK  ++  A  
Sbjct: 465 APDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQN 524

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + +L ++    PD  V+S ++      G  E+A +++  ++   +
Sbjct: 525 IFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGI 569



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 120/452 (26%), Positives = 219/452 (48%), Gaps = 2/452 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T + ++   C    +  A   +  M  +  +PD     NLI G     + ++A 
Sbjct: 254 IPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKEAV 313

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V + M     +PD +T NM++G LCK G+I+ A  + D M++ G  PDV +Y  +L   
Sbjct: 314 RVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGY 373

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G        +   L  G  P + T+++LI+       + +A+ + ++M   G  PD+
Sbjct: 374 ATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDV 433

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW-DAVDKILD 351
           VTY +++   C+ GK DDA+   N ++ +G+ P+   Y+ L+    + G    A + IL+
Sbjct: 434 VTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILE 493

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           IMN       VF ++ +IN LCK G +  A N F+  V+    PD V Y+ ++   C  G
Sbjct: 494 IMNNGMRLDIVF-FSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVG 552

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            + +AL++   +  +   P ++ Y TL++G  K G +++ + L+ +M++ GI P  I + 
Sbjct: 553 KMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYN 612

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            +I G   A +   A     E+ + G  +    Y +V+ G  K++  D AI + + + + 
Sbjct: 613 IIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAM 672

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             K D    +T++  +      EEA  L+  +
Sbjct: 673 NVKIDIITLNTMIAGMFQTRRVEEAKDLFASI 704



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 225/478 (47%), Gaps = 37/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +L++ C +GK   A  L+ +MA    +  PD      +I    +   + KA  + + MV 
Sbjct: 192 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTVIDCFFKEGDVNKACDLFKEMVQ 251

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TY+ +V  LCK   +  A A L +M   G  PD  TYN ++      G++K+
Sbjct: 252 RGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGVLPDNWTYNNLIYGYSSTGQWKE 311

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +K+  R    P ++T  +L+  +CK   I  A +V D MA++G +PD+ +Y  ++N
Sbjct: 312 AVRVFKEMRRHSILPDVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLN 371

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +G   D   + + +L  G+ P+  T++ L+ +  + G  D    I + M +    P
Sbjct: 372 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKP 431

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP------------------------- 395
            V TY  +I  LC+ G +D A+  FNQM+ +   P                         
Sbjct: 432 DVVTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 491

Query: 396 ----------DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                     DIV +++++  LCK G + +A  +  L       P  + Y+ L+DG    
Sbjct: 492 LEIMNNGMRLDIVFFSSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLV 551

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G MEKA+ ++  M+  GI P+ + + TL+ G+C+  +++E + L +E+ ++G K     Y
Sbjct: 552 GKMEKALRVFDAMVSAGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 611

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            ++I GL  + +   A      M  S    +   ++ +++    +   +EA  L+++L
Sbjct: 612 NIIIDGLFVAGRTVPAKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKEL 669



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 103/382 (26%), Positives = 184/382 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + C  GK+ +A  + D MA + Q PD      ++ G      +   + + 
Sbjct: 327 DVVTLNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYKIMLNGYATKGCLVDMTDLF 386

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M+  G  PD  T+++++      G +  A+ + +EM   G +PDV+TY T++  +   
Sbjct: 387 DLMLGDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRI 446

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+  +   + +G  P    Y  LI+  C    + +A E++ ++   G   DIV +
Sbjct: 447 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFF 506

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +S++N  CK G+  DA  + +  ++ G  P+++ Y+ L+      G  +   ++ D M  
Sbjct: 507 SSIINNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVS 566

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A   P V  Y  L+NG CK G +D  ++ F +M+ K  +P  + YN ++  L   G    
Sbjct: 567 AGIEPNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVP 626

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A    H +  S  +    TYN ++ G  K  C ++A+ L+ ++    +  D IT  T+I 
Sbjct: 627 AKVKFHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIA 686

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G  +  +VEEA DL   I + G
Sbjct: 687 GMFQTRRVEEAKDLFASISRSG 708



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 83/325 (25%), Positives = 156/325 (48%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T + +++ + + G L  A  + + M      PD      +I  L RI +++
Sbjct: 391 GDGIAPDIYTFSVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYTTVIAALCRIGKMD 450

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A +    M+  G  PD   Y+ ++ G C  G +  A  L+ E+  +G   D++ +++I+
Sbjct: 451 DAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELILEIMNNGMRLDIVFFSSII 510

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G+   A   +   +  G  P  + Y++L++  C    + +A+ V D M   G  
Sbjct: 511 NNLCKLGRIMDAQNIFDLTVNVGQHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 570

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++V Y +LVN  CK G+ D+ + +   +L +G++P++I YN ++  L   G        
Sbjct: 571 PNVVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFVAGRTVPAKVK 630

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M E+  +    TYNI++ G  K    D AI  F ++ + N + DI+T NT++  + +
Sbjct: 631 FHEMTESGIAINKCTYNIVLRGFFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 690

Query: 410 EGMLNEALQLLHLLNGSSCSPCLIT 434
              + EA  L   ++ S   PC++T
Sbjct: 691 TRRVEEAKDLFASISRSGLVPCVVT 715



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 74/282 (26%), Positives = 127/282 (45%), Gaps = 15/282 (5%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLG----SRGCWDAVDKILDIMNEASH------ 358
           +DA  +++ L  RG        N  L +L     S  C       + + N A+       
Sbjct: 50  EDAHDLLDELQRRGTPVLGRDLNGFLAALARAPSSAACGSGPALAVALFNRAASRAQGPR 109

Query: 359 --SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             SPT  TY IL++   +    + A+  F Q++    + DI+  N +L   C+    +EA
Sbjct: 110 VLSPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEA 169

Query: 417 LQ-LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI--SPDDITHRTL 473
           L  LLH      C P + +Y+ L+  L  +G   +A  L   M E G   SPD + + T+
Sbjct: 170 LDILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYTTV 229

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I  F +   V +A DL KE+ +RG       Y  V+H LCK++ +  A   L  M++   
Sbjct: 230 IDCFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMGKAEAFLRQMVNKGV 289

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            PD+  ++ ++   +  G  +EA ++++++    +     TL
Sbjct: 290 LPDNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 331


>gi|297816088|ref|XP_002875927.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297321765|gb|EFH52186.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 657

 Score =  209 bits (532), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 131/411 (31%), Positives = 211/411 (51%), Gaps = 9/411 (2%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL +    +   +++  MV  G  P+ I+Y+ ++  L   GQI  A +LL +M   G
Sbjct: 251 LINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRG 310

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK-GCPPYLITYTILIEQVCKQCGIARA 276
           C P++ T +++++  F  G    A+  W   +R  G  P ++ Y  L++  C    I +A
Sbjct: 311 CHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKA 370

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + V   M   GCSP+I TY SL+N   K+G  + AV + N +L+ G  PN + Y +++ +
Sbjct: 371 VSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEA 430

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQP 395
           L     +   + +++IM++ + +P+V T+N  I GLC  G +D A   F QM  +  C P
Sbjct: 431 LCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPP 490

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +IVTYN +L  L K   + EA  L   +          TYNTL+ G    G    A+ L 
Sbjct: 491 NIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGIALQLV 550

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI--GKRGNKMRNSAYRLVIHGLC 513
           G+MM NG SPD+IT   +I  +C+  + E AV +L  +  G+R  +    +Y  VI GLC
Sbjct: 551 GKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWRPDVISYTNVIWGLC 610

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +S   +  + + E MIS R  P   +  ++ ++ A   MT     LW + +
Sbjct: 611 RSNCREDGVILFERMISERIIP---ILRSVCQEAAR--MTIPNDVLWLRFV 656



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/459 (27%), Positives = 224/459 (48%), Gaps = 35/459 (7%)

Query: 136 ASKLIDIMARRNQI---PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           A + +++  R  +    P      +++  L+  +RI+    V + M   G  P+  TYN+
Sbjct: 126 AERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNV 185

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG---------------- 236
           ++  LCK  ++  A  LL EMS  GC P+ ++Y T++ +M + G                
Sbjct: 186 LLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVV 245

Query: 237 --------------KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
                          +K  +    + + KG  P +I+Y+ LI ++     I  A  +L  
Sbjct: 246 SVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQ 305

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRG 341
           M   GC P+I T +SLV     +G   DA+ + N ++   G++PN + YNTL+    S G
Sbjct: 306 MLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHG 365

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             D    +   M E   SP + TY  LING  K G ++ A+  +N+M++  C P++V Y 
Sbjct: 366 NIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYT 425

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           +++ ALC+     EA  L+ +++  +C+P + T+N  I GL   G ++ A  ++ QM + 
Sbjct: 426 SMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQ 485

Query: 462 GISPDDI-THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
              P +I T+  L+ G  +A+++EEA  L +EI  RG +   S Y  ++HG C +    +
Sbjct: 486 YRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHGSCNAGLPGI 545

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           A+Q++  M+ +   PD+   + I+      G  E A ++
Sbjct: 546 ALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQM 584



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 216/454 (47%), Gaps = 9/454 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+  C   K+  A KL+  M+ +   P+      +I  +  +  +++  ++ +  
Sbjct: 182 TYNVLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERF 241

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P    YN ++ GLCK    +  + L+ EM   G  P+VI+Y+T++  + ++G+ 
Sbjct: 242 E-----PVVSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQI 296

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNS 297
           + A       L++GC P + T + L++    +     A+++ + M    G  P++V YN+
Sbjct: 297 ELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNT 356

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           LV   C  G  D AV V  ++   G  PN  TY +L++    RG  +    I + M  + 
Sbjct: 357 LVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSG 416

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V  Y  ++  LC++     A +    M  +NC P + T+N  +  LC  G L+ A 
Sbjct: 417 CCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAE 476

Query: 418 QLLHLLNGS-SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           ++   +     C P ++TYN L+DGLAK   +E+A  L  ++   G+     T+ TL+ G
Sbjct: 477 KVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLLHG 536

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR--YK 534
            C A     A+ L+ ++   G         ++I   CK  K + A+Q+L+L+   R  ++
Sbjct: 537 SCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQMLDLVSCGRRKWR 596

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           PD   ++ ++  +      E+   L++++I  ++
Sbjct: 597 PDVISYTNVIWGLCRSNCREDGVILFERMISERI 630



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 102/407 (25%), Positives = 195/407 (47%), Gaps = 6/407 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +IR L    +++    +LQ M + G       +  ++    + G    A+ +   +   G
Sbjct: 81  MIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDLFISVISVYRQVGLAERAVEMFYRIKEFG 140

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+P V  YN +L T+    + +     ++D  R G  P + TY +L++ +CK   +  A 
Sbjct: 141 CDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKNNKVDGAK 200

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++L +M+ +GC P+ V+Y ++++  C+ G   +        L+   EP    YN L++ L
Sbjct: 201 KLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEG-----RQLAERFEPVVSVYNALINGL 255

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                +    +++  M E   SP V +Y+ LIN L   G ++ A +   QM+ + C P+I
Sbjct: 256 CKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHPNI 315

Query: 398 VTYNTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            T ++++      G   +AL +   ++ G    P ++ YNTL+ G    G ++KA+ ++ 
Sbjct: 316 HTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSVFL 375

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M E G SP+  T+ +LI GF +   +E AV +  ++   G       Y  ++  LC+  
Sbjct: 376 HMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCRHS 435

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           K   A  ++E+M      P    F+  +K + D G  + A K+++++
Sbjct: 436 KFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQM 482



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 168/351 (47%), Gaps = 12/351 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRG-LIRIDRIEKASKVLQIMVMS 181
           ++    + G++  A  L+  M +R   P+ H   +L++G  +R    +      Q++   
Sbjct: 286 LINELSNSGQIELAFSLLAQMLKRGCHPNIHTLSSLVKGCFVRGTTFDALDMWNQMIRGF 345

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P+ + YN +V G C  G I  A+++   M   GC P++ TY +++      G  + A
Sbjct: 346 GLQPNVVAYNTLVQGFCSHGNIDKAVSVFLHMEEIGCSPNIRTYGSLINGFTKRGSLEGA 405

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +  W   L  GC P ++ YT ++E +C+      A  +++ M+ E C+P + T+N+ +  
Sbjct: 406 VYIWNKMLTSGCCPNVVVYTSMVEALCRHSKFKEAESLIEIMSKENCAPSVPTFNAFIKG 465

Query: 302 SCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLHSLG-SRGCWDAVDKILDIMNEASHS 359
            C  G+ D A  V   +  +    PN +TYN LL  L  +    +A     +I       
Sbjct: 466 LCDAGRLDWAEKVFRQMEQQYRCPPNIVTYNELLDGLAKANRIEEAYGLTREIFMRGVEW 525

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
            T  TYN L++G C  GL   A+    +M+     PD +T N ++ A CK+G    A+Q+
Sbjct: 526 STS-TYNTLLHGSCNAGLPGIALQLVGKMMVNGKSPDEITMNMIILAYCKQGKAERAVQM 584

Query: 420 LHLLNGSSCS-----PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           L L+   SC      P +I+Y  +I GL +  C E  ++L+ +M+   I P
Sbjct: 585 LDLV---SCGRRKWRPDVISYTNVIWGLCRSNCREDGVILFERMISERIIP 632



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 105/461 (22%), Positives = 201/461 (43%), Gaps = 75/461 (16%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDNGKFKQAIGFW 245
           +T+ +M+  L   GQ+ S   LL +M + G  C  D+  + +++      G  ++A+  +
Sbjct: 76  LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL--FISVISVYRQVGLAERAVEMF 133

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
                 GC P +  Y  +++ +  +  I     V  DM  +G  P++ TYN L+   CK 
Sbjct: 134 YRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYNVLLKALCKN 193

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-------GSRGCWDAVDKILDIMN---- 354
            K D A  ++  + ++G  PN+++Y T++ S+         R   +  + ++ + N    
Sbjct: 194 NKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPVVSVYNALIN 253

Query: 355 -------------------EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC-- 393
                              E   SP V +Y+ LIN L   G ++ A +   QM+ + C  
Sbjct: 254 GLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLAQMLKRGCHP 313

Query: 394 ----------------------------------QPDIVTYNTVLGALCKEGMLNEALQL 419
                                             QP++V YNT++   C  G +++A+ +
Sbjct: 314 NIHTLSSLVKGCFVRGTTFDALDMWNQMIRGFGLQPNVVAYNTLVQGFCSHGNIDKAVSV 373

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +    CSP + TY +LI+G  K+G +E A+ ++ +M+ +G  P+ + + +++   CR
Sbjct: 374 FLHMEEIGCSPNIRTYGSLINGFTKRGSLEGAVYIWNKMLTSGCCPNVVVYTSMVEALCR 433

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS-RYKPDDT 538
             + +EA  L++ + K         +   I GLC + ++D A +V   M    R  P+  
Sbjct: 434 HSKFKEAESLIEIMSKENCAPSVPTFNAFIKGLCDAGRLDWAEKVFRQMEQQYRCPPNIV 493

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL----IEWKVFEKGTTL 575
            ++ ++  +A     EEAY L +++    +EW      T L
Sbjct: 494 TYNELLDGLAKANRIEEAYGLTREIFMRGVEWSTSTYNTLL 534



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/244 (20%), Positives = 106/244 (43%), Gaps = 36/244 (14%)

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK--NCQPDIVTYNTVLGALCKEG 411
           N   H+P   T+ ++I  L   G VD       QM  +  +C  D+  + +V+    + G
Sbjct: 69  NLFKHTP--LTFEVMIRKLAMDGQVDSVQYLLQQMKLQGFHCSEDL--FISVISVYRQVG 124

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           +   A+++ + +    C P +  YN ++D L  +  ++   ++Y  M  +G  P+  T+ 
Sbjct: 125 LAERAVEMFYRIKEFGCDPSVKIYNHVLDTLLGENRIQMIYMVYRDMKRDGFEPNVFTYN 184

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI---------------------- 509
            L+   C+ ++V+ A  LL E+  +G      +Y  VI                      
Sbjct: 185 VLLKALCKNNKVDGAKKLLVEMSNKGCCPNAVSYTTVISSMCEVGMVKEGRQLAERFEPV 244

Query: 510 --------HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
                   +GLCK +     ++++  M+     P+   +ST++ ++++ G  E A+ L  
Sbjct: 245 VSVYNALINGLCKERDYKGGVELMSEMVEKGISPNVISYSTLINELSNSGQIELAFSLLA 304

Query: 562 KLIE 565
           ++++
Sbjct: 305 QMLK 308


>gi|413950073|gb|AFW82722.1| hypothetical protein ZEAMMB73_503137 [Zea mays]
          Length = 620

 Score =  209 bits (532), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 217/451 (48%), Gaps = 30/451 (6%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM-------- 178
            C   ++  A K++D MAR+   PD      ++  L ++DR+++A++VL  M        
Sbjct: 146 LCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAMPPVAASYN 205

Query: 179 ----------------------VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
                                 V  G  P+ ITY  +V   CK G++R A A+L  M ++
Sbjct: 206 AIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVIT 265

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           GC P+V+T+  ++R +FD+G+   A+  W+  + +G  P  ++Y ILI  +C    +  A
Sbjct: 266 GCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSVGDLKGA 325

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +L+ M   GC P++ TY++L++   K G    A+ + N++   G +PN + Y  ++  
Sbjct: 326 SSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVYTNMVDV 385

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +  ++    ++D M   +  P   T+N LI  LC    V RA+  F++M    C P+
Sbjct: 386 FCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRRHGCVPN 445

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             TYN ++  L +EG   +AL ++  +        L+TYNT++ GL +     +AMV  G
Sbjct: 446 GRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSREAMVFVG 505

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M+  GI P+  T   +I  +C+  +V  A  +L  +           Y +++  LC   
Sbjct: 506 KMIVQGIQPNAFTFSAIIHAYCKEGEVRMAAWMLGAMNVVNCHRNILVYTILMAELCNQD 565

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           K+  A+  L  M+     P+   ++ +V+ V
Sbjct: 566 KLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 596



 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/376 (29%), Positives = 189/376 (50%), Gaps = 2/376 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I+  FC  G+L  A  ++  M      P+      L+RGL    R+  A  + + M
Sbjct: 238 TYTTIVDAFCKAGELRMACAILARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWM 297

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P T++YN+++ GLC  G ++ A ++L+ M   GC P+V TY+T++      G  
Sbjct: 298 VAEGWAPSTVSYNILIRGLCSVGDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDL 357

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI  W D  R GC P ++ YT +++  CK+    +A  ++D M +E C P+ VT+N+L
Sbjct: 358 GGAISIWNDMSRSGCKPNVVVYTNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTL 417

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEAS 357
           +   C   +   A+ V + +   G  PN  TYN L+H L   G C DA+  + + M    
Sbjct: 418 IRSLCDCRRVGRALGVFHEMRRHGCVPNGRTYNELIHGLFREGNCGDALHMVTE-MQSHG 476

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
              ++ TYN +++GLC+  +   A+    +M+ +  QP+  T++ ++ A CKEG +  A 
Sbjct: 477 IELSLVTYNTVVSGLCQTRMSREAMVFVGKMIVQGIQPNAFTFSAIIHAYCKEGEVRMAA 536

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L  +N  +C   ++ Y  L+  L  +  +  AM    +M+  GI P+ +T   L+ G 
Sbjct: 537 WMLGAMNVVNCHRNILVYTILMAELCNQDKLVDAMTYLLKMLYEGIYPNTVTWNVLVRGV 596

Query: 478 CRADQVEEAVDLLKEI 493
            R     E  D ++ I
Sbjct: 597 FRNLGCIEPSDFIQHI 612



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 196/391 (50%), Gaps = 5/391 (1%)

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
            L + +R+  A K+L  M   G  PD +TY  +V  LCK  ++  A  +L  M      P
Sbjct: 145 ALCQNNRVGAARKMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PP 199

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
              +YN I+  +    + ++      D + +G  P +ITYT +++  CK   +  A  +L
Sbjct: 200 VAASYNAIVLALCREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAIL 259

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
             M I GC+P++VT+ +LV      G+  DA+ +   +++ G  P++++YN L+  L S 
Sbjct: 260 ARMVITGCTPNVVTFTALVRGLFDDGRVHDALDMWRWMVAEGWAPSTVSYNILIRGLCSV 319

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G       IL+ M +    P V TY+ LI+G  K G +  AI+ +N M    C+P++V Y
Sbjct: 320 GDLKGASSILNSMEQHGCFPNVRTYSTLIDGFSKAGDLGGAISIWNDMSRSGCKPNVVVY 379

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             ++   CK+ M N+A  L+  +   +C P  +T+NTLI  L     + +A+ ++ +M  
Sbjct: 380 TNMVDVFCKKLMFNQAKSLIDKMLLENCPPNTVTFNTLIRSLCDCRRVGRALGVFHEMRR 439

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           +G  P+  T+  LI G  R     +A+ ++ E+   G ++    Y  V+ GLC+++    
Sbjct: 440 HGCVPNGRTYNELIHGLFREGNCGDALHMVTEMQSHGIELSLVTYNTVVSGLCQTRMSRE 499

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           A+  +  MI    +P+   FS I+     +G
Sbjct: 500 AMVFVGKMIVQGIQPNAFTFSAIIHAYCKEG 530



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 46/213 (21%), Positives = 91/213 (42%), Gaps = 20/213 (9%)

Query: 369 INGLCKYGLVDRAINSFNQMVSK-NCQ----------PDIVTYNTVLGALCKEGMLNEAL 417
           +    + G  DRA+ +F + V    C           P          ALC+   +  A 
Sbjct: 97  VGAFARAGAPDRALKTFYRAVHDLGCARPHRAAALQPPHRRAAAGRTWALCQNNRVGAAR 156

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++L  +    C P  +TY T++  L K   +++A  +   M      P   ++  ++   
Sbjct: 157 KMLDEMARKGCPPDDVTYATIVSVLCKLDRLDEATEVLAAM-----PPVAASYNAIVLAL 211

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           CR  +++E   ++ ++  RG +     Y  ++   CK+ ++ MA  +L  M+ +   P+ 
Sbjct: 212 CREFRMQEVFSVVSDMVGRGLQPNVITYTTIVDAFCKAGELRMACAILARMVITGCTPNV 271

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFE 570
             F+ +V+ + DDG   +A  +W+    W V E
Sbjct: 272 VTFTALVRGLFDDGRVHDALDMWR----WMVAE 300


>gi|222615488|gb|EEE51620.1| hypothetical protein OsJ_32898 [Oryza sativa Japonica Group]
          Length = 822

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 215/443 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N++L+    + +  DA KL D M   +   D +    L+RGL    R+E+  K+++    
Sbjct: 173 NRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWG 232

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G +P  + YN+++ G C+RG +   + LL EM   G  P ++TY +++  +   G  ++
Sbjct: 233 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEK 292

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               + +  ++G  P +  Y  +I+ +CK     +A+ +L  M   GC PDI+T+N+L+ 
Sbjct: 293 IGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLIT 352

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C +G    A   +   + R + PN ++Y  L+H    RG   A   +L  M    H+P
Sbjct: 353 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTP 412

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V T+  LI+GL   G V  A+    +M  +   PD+  YN ++  LCK+ ML  A  +L
Sbjct: 413 DVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNIL 472

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +   +  P    Y TLIDG  +   +  A  ++  M   G+ PD ++   +I G+C+ 
Sbjct: 473 EEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQF 532

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             + EA+  +  + K G       Y  VI G  K   ++ A++ L  MI  + KP+   +
Sbjct: 533 GMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 592

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           S+++      G T+ A  L+  +
Sbjct: 593 SSLINGYCKTGDTDSAEGLFANM 615



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 203/424 (47%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C RG +     L+  M  +  +P      +LI  L +   +EK   +   M  
Sbjct: 243 NVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRK 302

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+   YN ++  LCK      A+ +L +M  SGC+PD+IT+NT++  +   G  ++
Sbjct: 303 RGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRK 362

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A  F ++ +R+   P  ++YT LI   C +  +  A ++L +M   G +PD+VT+ +L++
Sbjct: 363 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIH 422

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                GK  +A++V   +  R + P+   YN L+  L  +    A   IL+ M E +  P
Sbjct: 423 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQP 482

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             F Y  LI+G  +   +  A   F  M  K  +PDIV+ N ++   C+ GM++EA+  +
Sbjct: 483 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCM 542

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C P   TY T+I G AK+G +  A+     M++    P+ +T+ +LI G+C+ 
Sbjct: 543 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 602

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
              + A  L   +           Y ++I  L K  KV  A    E M+ +   P+D   
Sbjct: 603 GDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 662

Query: 541 STIV 544
             +V
Sbjct: 663 HYLV 666



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 189/388 (48%), Gaps = 1/388 (0%)

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMF 233
           LQ M ++G  P       +V      G +  A  + + +    G  P+V   N +L+ + 
Sbjct: 121 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLV 180

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +  ++  A   + + L +       +  +L+  +C +  +   +++++     GC P +V
Sbjct: 181 EQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVV 240

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            YN L++  C++G     +L++  + ++G  P  +TY +L++ LG +G  + +  +   M
Sbjct: 241 FYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEM 300

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +   SP V  YN +I+ LCK     +A+    QM +  C PDI+T+NT++  LC EG +
Sbjct: 301 RKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 360

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +A   L        +P  ++Y  LI G   +G +  A  L  +MM  G +PD +T   L
Sbjct: 361 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGAL 420

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G   A +V EA+ + +++ +R      + Y ++I GLCK   +  A  +LE M+    
Sbjct: 421 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNV 480

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           +PD+ V++T++          +A K+++
Sbjct: 481 QPDEFVYATLIDGFIRSENLGDARKIFE 508



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 204/437 (46%), Gaps = 2/437 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           GK TD  +   +  +   +P+   C  L++ L+   R + A K+   M+      D  + 
Sbjct: 150 GKATDMCE--RLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYST 207

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
            ++V GLC  G++   + L++    +GC P V+ YN ++      G   + +    +   
Sbjct: 208 CVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEA 267

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           KG  P L+TY  LI  + K+  + +   +  +M   G SP++  YNS+++  CK      
Sbjct: 268 KGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQ 327

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A++++  + + G +P+ IT+NTL+  L   G     +  L        +P   +Y  LI+
Sbjct: 328 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 387

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G C  G +  A +   +M+ +   PD+VT+  ++  L   G ++EAL +   +      P
Sbjct: 388 GFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 447

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            +  YN LI GL KK  +  A  +  +M+E  + PD+  + TLI GF R++ + +A  + 
Sbjct: 448 DVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 507

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           + +  +G +    +   +I G C+   +  AI  +  M      PD+  ++T++   A  
Sbjct: 508 EFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 567

Query: 551 GMTEEAYKLWQKLIEWK 567
           G    A +    +I+ K
Sbjct: 568 GNLNGALRWLCDMIKRK 584



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 200/440 (45%), Gaps = 26/440 (5%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G +  A   +    RR   P+      LI G      +  AS +L  M
Sbjct: 346 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEM 405

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD +T+  ++ GL   G++  A+ + ++M+     PDV  YN ++  +      
Sbjct: 406 MGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHML 465

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    ++ L K   P    Y  LI+   +   +  A ++ + M  +G  PDIV+ N++
Sbjct: 466 PAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAM 525

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C+ G   +A+L ++N+   G  P+  TY T++     +G  +   + L  M +   
Sbjct: 526 IKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKC 585

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE------GM 412
            P V TY+ LING CK G  D A   F  M ++   P++VTY  ++G+L K+      G+
Sbjct: 586 KPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGL 645

Query: 413 LNEALQLLH----------LLNG-SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
             E + L H          L+NG +SC+PC+I  N++    ++    +  +V++ +++ +
Sbjct: 646 YFETMLLNHCSPNDVTLHYLVNGLTSCTPCVI--NSICCNTSEVHGKDALLVVFKKLVFD 703

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK---- 517
              P +  +  +I+  CR + + EA+D    + K+G       +  +++G C   K    
Sbjct: 704 IGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSMNW 763

Query: 518 ---VDMAIQVLELMISSRYK 534
              +    Q  E  I  RYK
Sbjct: 764 RTILPNEFQQEEFEIIFRYK 783



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 139/313 (44%), Gaps = 19/313 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N ++   C +  L  A  +++ M  +N  PD      LI G IR + +  A K+ 
Sbjct: 448 DVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 507

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD ++ N M+ G C+ G +  AI  +  M   GC PD  TY T++      
Sbjct: 508 EFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 567

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A+ +  D +++ C P ++TY+ LI   CK      A  +  +M  E  SP++VTY
Sbjct: 568 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTY 627

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV--------- 346
             L+    K+ K   A L    +L     PN +T + L++ L S  C   V         
Sbjct: 628 TILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTS--CTPCVINSICCNTS 685

Query: 347 -----DKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
                D +L +  +       P    YN +I  LC++ ++  A++  N+M  K   P+ +
Sbjct: 686 EVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPI 745

Query: 399 TYNTVLGALCKEG 411
           T+ ++L   C  G
Sbjct: 746 TFLSLLYGFCSVG 758



 Score =  124 bits (312), Expect = 9e-26,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G  P++   N L+    +Q ++DDA  + + +L      ++ +   L+  L   G  +  
Sbjct: 164 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEG 223

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            K+++    A   P V  YN+LI+G C+ G + R +    +M +K   P +VTY +++  
Sbjct: 224 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINC 283

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           L K+G L +   L   +     SP +  YN++ID L K     +AMV+  QM  +G  PD
Sbjct: 284 LGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPD 343

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            IT  TLI G C    V +A   L+E  +R       +Y  +IHG C   ++  A  +L 
Sbjct: 344 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLM 403

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            M+   + PD   F  ++  +   G   EA  + +K+ E +VF
Sbjct: 404 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 446


>gi|242067349|ref|XP_002448951.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
 gi|241934794|gb|EES07939.1| hypothetical protein SORBIDRAFT_05g002310 [Sorghum bicolor]
          Length = 799

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 218/441 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F + G++     L   M  R   PD      +I GL +    ++A  V Q M+ +G
Sbjct: 205 VINGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNG 264

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  TYN ++ G    G+ +  + +L+EMS  G +PD  TY ++L  +  NG+ ++A 
Sbjct: 265 FKPNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREAR 324

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            F+   +RKG  P + TY ILI     +  ++     LD M   G SPD   +N   +  
Sbjct: 325 FFFDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAY 384

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K G  D A+ + N +   G+ PN + Y  L+ +L   G  D  +   + M     +P +
Sbjct: 385 AKCGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNI 444

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             +N L+ GLC     +RA     +M+ +   P+ V +NT++  LC  G + E  +L+ L
Sbjct: 445 VVFNSLVYGLCTVDKWERAEELVYEMLDQGICPNAVFFNTLICNLCNVGRVMEGRRLIDL 504

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   +Y  LI G    G  ++A  ++  M+  G+SP ++T+ TL+ G+C A +
Sbjct: 505 MEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASR 564

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +++A  L +E+ ++G       Y  ++HGL ++K+   A ++   MI+S  K D   ++ 
Sbjct: 565 IDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNI 624

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           I+  +      +EA+K++Q L
Sbjct: 625 ILNGLCKSNCVDEAFKMFQSL 645



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/395 (26%), Positives = 185/395 (46%), Gaps = 10/395 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  + ++G L++    +D+M      PD H          +   I+KA  +   M   G
Sbjct: 345 LIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAKCGMIDKAMDIFNKMRQHG 404

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ + Y  ++  LCK G++  A    ++M   G  P+++ +N+++  +    K+++A 
Sbjct: 405 LSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAE 464

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE---VLDDMAIEGCSPDIVTYNSLV 299
               + L +G  P  + +  LI   C  C + R +E   ++D M   G  PD  +Y  L+
Sbjct: 465 ELVYEMLDQGICPNAVFFNTLI---CNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLI 521

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  C  G+ D+A  V + ++S G+ P  +TYNTLLH   S    D    +   M     +
Sbjct: 522 SGYCLTGRTDEAEKVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVT 581

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P V TYN +++GL +      A   +  M++   + DI TYN +L  LCK   ++EA ++
Sbjct: 582 PGVVTYNTILHGLFQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKM 641

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              L        +IT+  +I  L K G  E AM L+  +  NG+ P+ +T+R +      
Sbjct: 642 FQSLCSKGLQLNIITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIE 701

Query: 480 ADQVEEAVDLLKEIGKRG----NKMRNSAYRLVIH 510
              +EE   L   + K G    ++M N+  R ++H
Sbjct: 702 EGSLEEFDSLFSAMEKNGTAPNSQMLNALVRRLLH 736



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 98/389 (25%), Positives = 184/389 (47%), Gaps = 4/389 (1%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            P+  TY++++G  C+ G +    A    +  +G   D I  N +L+ +    +  +A+ 
Sbjct: 87  APNLCTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMD 146

Query: 244 FWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG---CSPDIVTYNSLV 299
               ++ + GC P  ++YTIL++ +C +     A+E+L  MA +    C P++V+Y+ ++
Sbjct: 147 VLLQRMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVI 206

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N    +G+ D    +   ++ RG+ P+ +TY T++  L     +D  + +   M +    
Sbjct: 207 NGFFTEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFK 266

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P  +TYN LI+G    G     +    +M ++  +PD  TY ++L  LCK G   EA   
Sbjct: 267 PNNYTYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFF 326

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +      P + TY  LI G A KG + +       M+ENG+SPD          + +
Sbjct: 327 FDSMIRKGIKPKVSTYGILIHGYATKGALSEMHSFLDLMVENGLSPDHHIFNIFFSAYAK 386

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              +++A+D+  ++ + G       Y  +I  LCK  +VD A      MI+    P+  V
Sbjct: 387 CGMIDKAMDIFNKMRQHGLSPNVVNYGALIDALCKLGRVDDAEVKFNQMINEGVTPNIVV 446

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           F+++V  +      E A +L  ++++  +
Sbjct: 447 FNSLVYGLCTVDKWERAEELVYEMLDQGI 475



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 81/312 (25%), Positives = 144/312 (46%), Gaps = 3/312 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++ N C+ G++ +  +LID+M      PD      LI G     R ++A KV   MV 
Sbjct: 483 NTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAEKVFDGMVS 542

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  +TYN ++ G C   +I  A  L  EM   G  P V+TYNTIL  +F   +F +
Sbjct: 543 IGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGLFQTKRFSE 602

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + +  G    + TY I++  +CK   +  A ++   +  +G   +I+T+  ++ 
Sbjct: 603 AKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNIITFTIMIG 662

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G+ +DA+ +   + + G+ PN +TY  +  +L   G  +  D +   M +   +P
Sbjct: 663 ALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSAMEKNGTAP 722

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL- 419
                N L+  L   G + RA    +++  +N   +  T + ++     +   + A  L 
Sbjct: 723 NSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEASTTSLLMSIFTSDEYQHHAKSLP 782

Query: 420 --LHLLNGSSCS 429
              H LN ++ S
Sbjct: 783 EKYHFLNEANSS 794



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 89/382 (23%), Positives = 172/382 (45%), Gaps = 1/382 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G++ DA    + M      P+     +L+ GL  +D+ E+A +++  M+  G
Sbjct: 415 LIDALCKLGRVDDAEVKFNQMINEGVTPNIVVFNSLVYGLCTVDKWERAEELVYEMLDQG 474

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ + +N ++  LC  G++     L+D M   G  PD  +Y  ++      G+  +A 
Sbjct: 475 ICPNAVFFNTLICNLCNVGRVMEGRRLIDLMEHVGVRPDAFSYTPLISGYCLTGRTDEAE 534

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +   +  G  P  +TY  L+   C    I  A  +  +M  +G +P +VTYN++++  
Sbjct: 535 KVFDGMVSIGLSPTEVTYNTLLHGYCSASRIDDAYCLFREMLRKGVTPGVVTYNTILHGL 594

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            +  ++ +A  +  N+++ G + +  TYN +L+ L    C D   K+   +        +
Sbjct: 595 FQTKRFSEAKELYLNMINSGTKCDIYTYNIILNGLCKSNCVDEAFKMFQSLCSKGLQLNI 654

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+ I+I  L K G  + A++ F  + +    P++VTY  V   L +EG L E   L   
Sbjct: 655 ITFTIMIGALLKGGRKEDAMDLFAAIPANGLVPNVVTYRLVAENLIEEGSLEEFDSLFSA 714

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  +  +P     N L+  L  +G + +A     ++ E   S +  T  +L+     +D+
Sbjct: 715 MEKNGTAPNSQMLNALVRRLLHRGDISRAGAYLSKLDERNFSVEAST-TSLLMSIFTSDE 773

Query: 483 VEEAVDLLKEIGKRGNKMRNSA 504
            +     L E     N+  +SA
Sbjct: 774 YQHHAKSLPEKYHFLNEANSSA 795



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 78/311 (25%), Positives = 137/311 (44%), Gaps = 45/311 (14%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH------SPTV 362
           DDA+ + + LL      +   +N LL ++    C  A +  +   N          +P +
Sbjct: 31  DDALKLFDELLHHARPASVRAFNHLLTAVSRARCSSASELAVSHFNRMVRECSDKVAPNL 90

Query: 363 FTYNILINGLCKYGLVDRAINSF------------------------------------N 386
            TY+ILI   C+ G ++    +F                                     
Sbjct: 91  CTYSILIGRFCRMGHLEHGFAAFGLILKTGWRMDHIAINQLLKGLCHGKRVGEAMDVLLQ 150

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL---NGSSCSPCLITYNTLIDGLA 443
           +M    C PD V+Y  +L  LC E    EAL+LLH++   +G  C P +++Y+ +I+G  
Sbjct: 151 RMPELGCMPDTVSYTILLKGLCNEKRAEEALELLHMMADDHGRRCPPNVVSYSIVINGFF 210

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
            +G ++K   L+ +M++ GI PD +T+ T+I G C+A   + A  + +++   G K  N 
Sbjct: 211 TEGQVDKPYNLFLEMIDRGIPPDVVTYTTVIDGLCKAQLFDRAEGVFQQMIDNGFKPNNY 270

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +IHG     K    +Q+LE M +   KPD   + +++  +  +G   EA   +  +
Sbjct: 271 TYNCLIHGYLSIGKWKEVVQMLEEMSARGLKPDCYTYGSLLNYLCKNGRCREARFFFDSM 330

Query: 564 IEWKVFEKGTT 574
           I   +  K +T
Sbjct: 331 IRKGIKPKVST 341


>gi|242045792|ref|XP_002460767.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
 gi|241924144|gb|EER97288.1| hypothetical protein SORBIDRAFT_02g034620 [Sorghum bicolor]
          Length = 762

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 223/446 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C+ G+L +A KL+D M  R   P+     +++  L    R+  A  V++ MV   
Sbjct: 300 LIHGYCALGELENAVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHK 359

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            + D   Y  ++ G C +G + SA    DEM   G   D +TY T++  +   G+ K+A 
Sbjct: 360 VILDEAVYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAE 419

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++ L +      +TYT+L++  CK+  +A A +V + M   G +P++VTY +L +  
Sbjct: 420 KVLQEMLARRLDVDEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGL 479

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CKQG    A  +++ + ++G+E N+ TYN+L++ L   G  D   + +  M+ A   P V
Sbjct: 480 CKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDV 539

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TY  LI+ LCK G +DRA +   +M+    +P IVTYN ++   C  G +    +LL  
Sbjct: 540 YTYTTLIDALCKSGELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEW 599

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +   +  P   TYN+L+        M+    +Y  M    + P++ T+  LI G C+A  
Sbjct: 600 MLEKNIHPNATTYNSLMKQYCIGNNMKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARS 659

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++EA     E+ ++G ++  S+Y  +I  L K KK   A ++   M    +  +  V++ 
Sbjct: 660 MKEAQYFHNEMIEKGFRLTASSYSALIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNF 719

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
            +    ++   E    L  +L+E  +
Sbjct: 720 YIDFNFNEDNLEATLALCDELVEASI 745



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 106/366 (28%), Positives = 189/366 (51%), Gaps = 5/366 (1%)

Query: 183 GVPD--TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           G+PD    +YN+++  LC  G++  A  L DEM+     PDV+TY  ++      G+ + 
Sbjct: 256 GLPDKNVCSYNILLKVLCGAGRVEDARQLFDEMA---SPPDVVTYGILIHGYCALGELEN 312

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    D + +G  P    YT ++  +C +  ++ A+ V++DM       D   Y ++++
Sbjct: 313 AVKLLDDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLS 372

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C +G    A    + +  +G+  + +TY TL++ L   G     +K+L  M       
Sbjct: 373 GFCNKGDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDV 432

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TY +L++G CK G +  A    N MV +   P++VTY  +   LCK+G +  A +LL
Sbjct: 433 DEVTYTVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELL 492

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           H ++         TYN+LI+GL K G +++AM     M   G+ PD  T+ TLI   C++
Sbjct: 493 HEMSNKGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKS 552

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +++ A DLL+E+   G K     Y ++++G C S +V+   ++LE M+     P+ T +
Sbjct: 553 GELDRAHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTY 612

Query: 541 STIVKK 546
           ++++K+
Sbjct: 613 NSLMKQ 618



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 185/397 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +      ++   C +G+++DA  +++ M     I D      ++ G      +  A 
Sbjct: 325 VEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNKGDLVSAR 384

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +    M   G   D +TY  ++ GLC+ G+++ A  +L EM     + D +TY  ++   
Sbjct: 385 RWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTYTVLVDGY 444

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK  +A       +++G  P ++TYT L + +CKQ  +  A E+L +M+ +G   + 
Sbjct: 445 CKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSNKGLELNA 504

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYNSL+N  CK G  D A+  + ++ + G++P+  TY TL+ +L   G  D    +L  
Sbjct: 505 CTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQE 564

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +    PT+ TYN+L+NG C  G V+        M+ KN  P+  TYN+++   C    
Sbjct: 565 MLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNN 624

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +    ++   +   +  P   TYN LI G  K   M++A   + +M+E G      ++  
Sbjct: 625 MKSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSA 684

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           LI    +  +  EA  L  ++ K G       Y   I
Sbjct: 685 LIRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYI 721



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 175/354 (49%), Gaps = 3/354 (0%)

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           +V +YN +L+ +   G+ + A   + +      PP ++TY ILI   C    +  A+++L
Sbjct: 261 NVCSYNILLKVLCGAGRVEDARQLFDEM---ASPPDVVTYGILIHGYCALGELENAVKLL 317

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           DDM   G  P+   Y S+V   C +G+  DA+ V+ +++   +  +   Y T+L    ++
Sbjct: 318 DDMVARGVEPNATVYTSVVALLCDKGRVSDALTVVEDMVHHKVILDEAVYTTVLSGFCNK 377

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G   +  +  D M     +    TY  LINGLC+ G +  A     +M+++    D VTY
Sbjct: 378 GDLVSARRWFDEMQRKGLATDGVTYTTLINGLCRAGELKEAEKVLQEMLARRLDVDEVTY 437

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             ++   CK G + EA Q+ + +     +P ++TY  L DGL K+G ++ A  L  +M  
Sbjct: 438 TVLVDGYCKRGKMAEAFQVHNTMVQRGVAPNVVTYTALSDGLCKQGDVQAANELLHEMSN 497

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G+  +  T+ +LI G C+A  +++A+  + ++   G K     Y  +I  LCKS ++D 
Sbjct: 498 KGLELNACTYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDR 557

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           A  +L+ M+ +  KP    ++ ++      G  E   KL + ++E  +    TT
Sbjct: 558 AHDLLQEMLDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATT 611



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/239 (23%), Positives = 104/239 (43%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G L  A + +  M      PD +    LI  L +   +++A  +LQ M
Sbjct: 506 TYNSLINGLCKAGYLDQAMRTMADMDAAGLKPDVYTYTTLIDALCKSGELDRAHDLLQEM 565

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G  P  +TYN+++ G C  G++     LL+ M      P+  TYN++++        
Sbjct: 566 LDNGIKPTIVTYNVLMNGFCMSGRVEGGKKLLEWMLEKNIHPNATTYNSLMKQYCIGNNM 625

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K     +K    +   P   TY ILI+  CK   +  A    ++M  +G      +Y++L
Sbjct: 626 KSTTEIYKGMCSRNVEPNENTYNILIKGHCKARSMKEAQYFHNEMIEKGFRLTASSYSAL 685

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +    K+ K+ +A  + +++   G       YN  +    +    +A   + D + EAS
Sbjct: 686 IRLLNKKKKFVEARKLFHDMRKEGFTAEPDVYNFYIDFNFNEDNLEATLALCDELVEAS 744


>gi|357499785|ref|XP_003620181.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495196|gb|AES76399.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 559

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 124/416 (29%), Positives = 224/416 (53%), Gaps = 8/416 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI+GL    +I +A +    +V  G   + ++Y  ++ GLCK GQ  +A+ LL  +    
Sbjct: 148 LIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKL 207

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P+V+ YNTI+ +M       +A   + + + KG  P ++TY  LI   C    +  A 
Sbjct: 208 VQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDAT 267

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++ + M  E  +P++ T+N LV+  CK+ +  +A  V+  ++ +G++P+  TYN+L+   
Sbjct: 268 DLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLM--- 324

Query: 338 GSRGCW-DAVDKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
             R C    V+K   I N  S    +P + +Y+I+I+G CK   VD A+N F +M   N 
Sbjct: 325 -DRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI 383

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD+VTYN+++  LCK G ++ AL+L+  ++        ITYN+++D L K   ++KA+ 
Sbjct: 384 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 443

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L  +M + GI PD  T+ TL+ G C+  ++E+A  + +++  +G  +  + Y  +I G C
Sbjct: 444 LLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFC 503

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
                D ++ +L  M  +   P+   +  I+  + D    ++A KL +++I   +F
Sbjct: 504 SHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGLF 559



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 206/392 (52%)

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL  ++  G  P+ IT   ++ GLC +GQI  A+   D++   G   + ++Y T++  + 
Sbjct: 129 VLAKILKMGYEPNVITLTTLIKGLCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLC 188

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+   A+   +    K   P ++ Y  +I+ +CK   +  A ++  +M  +G SPD+V
Sbjct: 189 KVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVV 248

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L++  C  GK  DA  + N ++   + PN  T+N L+              +L +M
Sbjct: 249 TYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMM 308

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P VFTYN L++  C    V++A + FN +  +   P+I +Y+ ++   CK   +
Sbjct: 309 MKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKV 368

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +EA+ L   ++ ++  P ++TYN+LIDGL K G +  A+ L  +M + G+  D IT+ ++
Sbjct: 369 DEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSI 428

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           +   C+  QV++A+ LL ++   G +     Y  ++ GLCK+ +++ A  V E ++   Y
Sbjct: 429 LDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGY 488

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             D  +++ +++     G+ +E+  L  K+ E
Sbjct: 489 ILDVNIYTAMIQGFCSHGLFDESLDLLSKMEE 520



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 111/453 (24%), Positives = 228/453 (50%), Gaps = 13/453 (2%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F END+  +N +             S    ++ ++N  P       ++  L++ +     
Sbjct: 45  FHENDDNKHNLV-------------SSFNRLLHQKNPKPSIFQFGKILGSLVKSNHYSTV 91

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             + + M  +G   D +  ++++    + GQ   + ++L ++   G EP+VIT  T+++ 
Sbjct: 92  VSLHRQMEFNGITSDLVILSILINCFSQLGQNPLSFSVLAKILKMGYEPNVITLTTLIKG 151

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   G+  QA+ F    +  G     ++Y  LI  +CK    + A+++L  +  +   P+
Sbjct: 152 LCLKGQIHQALQFHDKVVALGFHLNKVSYGTLINGLCKVGQTSAALQLLRRVDGKLVQPN 211

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +V YN++++  CK    ++A  + + ++S+G+ P+ +TYN L+      G       + +
Sbjct: 212 VVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKMKDATDLFN 271

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M   + +P V+T+NIL++G CK   +  A N    M+ +  +PD+ TYN+++   C   
Sbjct: 272 KMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSLMDRYCLVK 331

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +N+A  + + ++    +P + +Y+ +I G  K   +++AM L+ +M  N I PD +T+ 
Sbjct: 332 EVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNIIPDVVTYN 391

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +LI G C+  ++  A+ L+ E+  RG       Y  ++  LCK+ +VD AI +L  M   
Sbjct: 392 SLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIALLTKMKDE 451

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             +PD   ++T+V  +  +G  E+A  +++ L+
Sbjct: 452 GIQPDICTYTTLVDGLCKNGRLEDARIVFEDLL 484



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 97/375 (25%), Positives = 186/375 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G+ + A +L+  +  +   P+      +I  + ++  + +A  +   MV  G
Sbjct: 183 LINGLCKVGQTSAALQLLRRVDGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKG 242

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TYN ++ G C  G+++ A  L ++M      P+V T+N ++       + K+A 
Sbjct: 243 ISPDVVTYNALISGFCIVGKMKDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAK 302

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 +++G  P + TY  L+++ C    + +A  + + ++  G +P+I +Y+ +++  
Sbjct: 303 NVLAMMMKQGIKPDVFTYNSLMDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGF 362

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK  K D+A+ +   +    + P+ +TYN+L+  L   G      K++D M++       
Sbjct: 363 CKIKKVDEAMNLFKEMHCNNIIPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDK 422

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN +++ LCK   VD+AI    +M  +  QPDI TY T++  LCK G L +A  +   
Sbjct: 423 ITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFED 482

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L        +  Y  +I G    G  ++++ L  +M ENG  P+ +T+  +I      D+
Sbjct: 483 LLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDE 542

Query: 483 VEEAVDLLKEIGKRG 497
            ++A  LL+E+  RG
Sbjct: 543 NDKAEKLLREMITRG 557



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 99/355 (27%), Positives = 174/355 (49%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG  V+ +    N I+ + C    + +A  L   M  +   PD      LI G   + ++
Sbjct: 204 DGKLVQPNVVMYNTIIDSMCKVKLVNEAFDLYSEMVSKGISPDVVTYNALISGFCIVGKM 263

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A+ +   M+     P+  T+N++V G CK  +++ A  +L  M   G +PDV TYN++
Sbjct: 264 KDATDLFNKMIFENINPNVYTFNILVDGFCKERRLKEAKNVLAMMMKQGIKPDVFTYNSL 323

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +       +  +A   +    ++G  P + +Y+I+I   CK   +  A+ +  +M     
Sbjct: 324 MDRYCLVKEVNKAKHIFNTISQRGVNPNIHSYSIMIHGFCKIKKVDEAMNLFKEMHCNNI 383

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD+VTYNSL++  CK GK   A+ +++ +  RG+  + ITYN++L +L      D    
Sbjct: 384 IPDVVTYNSLIDGLCKLGKISYALKLVDEMHDRGVPHDKITYNSILDALCKNHQVDKAIA 443

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M +    P + TY  L++GLCK G ++ A   F  ++ K    D+  Y  ++   C
Sbjct: 444 LLTKMKDEGIQPDICTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFC 503

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
             G+ +E+L LL  +  + C P  +TY  +I  L  K   +KA  L  +M+  G+
Sbjct: 504 SHGLFDESLDLLSKMEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRGL 558



 Score = 70.5 bits (171), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 42/160 (26%), Positives = 74/160 (46%), Gaps = 8/160 (5%)

Query: 93  GLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF 152
            L +  + HD  +P        +D+ T N IL   C   ++  A  L+  M      PD 
Sbjct: 406 ALKLVDEMHDRGVP--------HDKITYNSILDALCKNHQVDKAIALLTKMKDEGIQPDI 457

Query: 153 HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
                L+ GL +  R+E A  V + +++ G + D   Y  M+ G C  G    ++ LL +
Sbjct: 458 CTYTTLVDGLCKNGRLEDARIVFEDLLVKGYILDVNIYTAMIQGFCSHGLFDESLDLLSK 517

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           M  +GC P+ +TY  I+ ++FD  +  +A    ++ + +G
Sbjct: 518 MEENGCIPNAVTYEIIICSLFDKDENDKAEKLLREMITRG 557


>gi|50878351|gb|AAT85126.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 920

 Score =  209 bits (531), Expect = 4e-51,   Method: Compositional matrix adjust.
 Identities = 145/528 (27%), Positives = 237/528 (44%), Gaps = 73/528 (13%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINL------IRGLIRIDRIE 169
           DE     ++  +C RG++ DA+++      RN++ D    +NL      I GL ++ R+E
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRV------RNEMRDAGIHVNLFVYNTMINGLCKLGRME 376

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +  KVLQ M   G  PD  +YN ++ G C+ G +R A  +   M  +G     +TYNT+L
Sbjct: 377 EVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436

Query: 230 RT-----------------------------------MFDNGKFKQAIGFWKDQLRKGCP 254
           +                                    +F  GK +QA+  WK+ L +G  
Sbjct: 437 KGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLA 496

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
             +IT+  +I  +CK   +A A E+LD M    C PD +TY +L +  CK G+   A  +
Sbjct: 497 KNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHL 556

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +N +   G  P+   +N+ +        W  V+ I   M+    SP + TY  LI G CK
Sbjct: 557 MNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCK 616

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA-LQLLHLLNGSSCSPCLI 433
            G +  A N + +MV+    P++   + ++    KEG ++EA L L  L+N      C I
Sbjct: 617 EGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCSI 676

Query: 434 T-------------------------YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           +                         +N +I GL K G +  A  L+  +      PD+ 
Sbjct: 677 STIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDNF 736

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +LI G   +  ++EA  L   +   G       Y  +I+GLCKS K+  A+ +   +
Sbjct: 737 TYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKL 796

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
            S    P+   ++T++ +   +G T EA+KL QK++E    E+   LL
Sbjct: 797 QSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLL 844



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 209/423 (49%), Gaps = 1/423 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L+     G+L+ A  + D M +    P    C  L+  L++      A+ V   M ++G
Sbjct: 154 LLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAG 213

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD  T  +M    C+ G++  A+  ++EM   G E +++ Y+ ++      G  + A 
Sbjct: 214 VLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDAR 273

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNF 301
              +   RKG  P ++TYT+L++  CK   +  A  V+ +M   G    D V Y  ++N 
Sbjct: 274 RILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING 333

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C++G+ DDA  V N +   G+  N   YNT+++ L   G  + V K+L  M +    P 
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++YN LI+G C+ G + +A      MV        +TYNT+L   C    +++AL+L  
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           L+     +P  I+ +TL+DGL K G  E+A+ L+ + +  G++ + IT  T+I G C+  
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIG 513

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ EA +LL  + +      +  YR +  G CK  ++  A  ++  M    + P   +F+
Sbjct: 514 RMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFN 573

Query: 542 TIV 544
           + +
Sbjct: 574 SFI 576



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 127/474 (26%), Positives = 222/474 (46%), Gaps = 51/474 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+ FCS   + DA +L  +M +R   P+   C  L+ GL +  + E+A  + +  
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   + IT+N ++ GLCK G++  A  LLD M    C PD +TY T+       G+ 
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILI--EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
             A          G  P +  +   I    + KQ    +  ++  +M+  G SP++VTY 
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW--HKVNDIHSEMSARGLSPNLVTYG 608

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA----------- 345
           +L+   CK+G   +A  +   +++ GM PN    + L+      G  D            
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 346 ------------VDKILDIMNEAS----HSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
                       +DKI  +++  +    HS  V  +N++I GLCK G +  A + F  + 
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHSANVM-WNVIIFGLCKSGRIADAKSLFESLR 727

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           +K   PD  TY++++      G ++EA  L  ++  +  +P +ITYN+LI GL K G + 
Sbjct: 728 NKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLS 787

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A+ L+ ++   GISP+ IT+ TLI  +C+  +  EA  L +++ + G            
Sbjct: 788 RAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEG------------ 835

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                   ++ AI++L+ MI +   P+   + T++      G  EE  KL+ ++
Sbjct: 836 -------YMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 882



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 207/445 (46%), Gaps = 36/445 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++  +C  G   DA ++++ + R+   P+      L++G  +  R+E+A +V++ M  
Sbjct: 257 HAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKE 316

Query: 181 SGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           +G  V D + Y MM+ G C+RG++  A  + +EM  +G   ++  YNT            
Sbjct: 317 TGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT------------ 364

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
                                  +I  +CK   +    +VL +M   G  PD  +YN+L+
Sbjct: 365 -----------------------MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLI 401

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  C++G    A  +   ++  G+   ++TYNTLL    S    D   ++  +M +   +
Sbjct: 402 DGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVA 461

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   + + L++GL K G  ++A+N + + +++    +++T+NTV+  LCK G + EA +L
Sbjct: 462 PNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEEL 521

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +    C P  +TY TL DG  K G +  A  L  +M   G +P      + I G   
Sbjct: 522 LDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFI 581

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A Q  +  D+  E+  RG       Y  +I G CK   +  A  +   M+++   P+  +
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFI 641

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLI 564
            S ++     +G  +EA  + QKL+
Sbjct: 642 CSALMSCFYKEGKVDEANLVLQKLV 666



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 108/382 (28%), Positives = 178/382 (46%), Gaps = 28/382 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +   +C  G+L  A+ L++ M      P      + I G     +  K + + 
Sbjct: 533 DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIH 592

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ +TY  ++ G CK G +  A  L  EM  +G  P+V   + ++   +  
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKE 652

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A    +  +     P     TI I+++           V+D +A        V +
Sbjct: 653 GKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS---------HVVDTIADGNPHSANVMW 703

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N ++   CK G+  DA  +  +L ++   P++ TY++L+H   + G  D    + D+M  
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A  +P + TYN LI GLCK G + RA+N FN++ SK   P+ +TYNT++   CKEG   E
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L                      + ++G ME+A+ L  QM+EN + P+ IT+ TLI 
Sbjct: 824 AFKLKQ-------------------KMVEEGYMEEAIKLLDQMIENNVDPNYITYCTLIH 864

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G+ ++  +EE   L  E+  RG
Sbjct: 865 GYIKSGNMEEISKLYDEMHIRG 886



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 210/442 (47%), Gaps = 11/442 (2%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR--IEKASKVLQIMVMSGGVPD 186
           SR  L   ++L+ I+AR  +   FH    L+  L           ++V +    S     
Sbjct: 96  SRPSLVSHAQLLHILARARR---FHDARALLSSLPPHAEPLFPHLAEVYRDFTFSA---- 148

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            +++++++      GQ+ SA+ + D M   GC P + + N +L  +  +G    A   + 
Sbjct: 149 -VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYG 207

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
                G  P   T  I+ +  C+   +A+A+E +++M   G   ++V Y+++++  C  G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT-VFTY 365
             +DA  ++ +L  +G+ PN +TY  L+      G  +  ++++  M E          Y
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
            ++ING C+ G +D A    N+M       ++  YNT++  LCK G + E  ++L  +  
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P   +YNTLIDG  ++G M KA  +   M+ NG++   +T+ TL+ GFC    +++
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+ L   + KRG      +   ++ GL K+ K + A+ + +  ++     +   F+T++ 
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507

Query: 546 KVADDGMTEEAYKLWQKLIEWK 567
            +   G   EA +L  ++ E +
Sbjct: 508 GLCKIGRMAEAEELLDRMKELR 529



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 72/285 (25%), Positives = 130/285 (45%), Gaps = 42/285 (14%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G L +A  L   M      P+   C  L+    +  ++++A+ VLQ +
Sbjct: 606 TYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKL 665

Query: 179 VMSGGVP----------------DTIT----------YNMMVGGLCKRGQIRSAIALLDE 212
           V    +P                DTI           +N+++ GLCK G+I  A +L + 
Sbjct: 666 VNIDMIPGCSISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFES 725

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           +      PD  TY++++     +G   +A       L  G  P +ITY  LI  +CK   
Sbjct: 726 LRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGK 785

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK----------------YDDAVLVIN 316
           ++RA+ + + +  +G SP+ +TYN+L++  CK+GK                 ++A+ +++
Sbjct: 786 LSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGYMEEAIKLLD 845

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            ++   ++PN ITY TL+H     G  + + K+ D M+     PT
Sbjct: 846 QMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLPT 890



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 98/207 (47%), Gaps = 19/207 (9%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+   C  G++ DA  L + +  +  +PD     +LI G      I++A  +  +M+ 
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P+ ITYN ++ GLCK G++  A+ L +++   G  P+ ITYNT++      GK  +
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    +  + +G                    +  AI++LD M      P+ +TY +L++
Sbjct: 824 AFKLKQKMVEEGY-------------------MEEAIKLLDQMIENNVDPNYITYCTLIH 864

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNS 327
              K G  ++   + + +  RG+ P +
Sbjct: 865 GYIKSGNMEEISKLYDEMHIRGLLPTN 891


>gi|242067235|ref|XP_002448894.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
 gi|241934737|gb|EES07882.1| hypothetical protein SORBIDRAFT_05g000986 [Sorghum bicolor]
          Length = 796

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 119/449 (26%), Positives = 230/449 (51%), Gaps = 45/449 (10%)

Query: 158 LIRGLIRIDRIEKASKVL-QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-- 214
           L++GL    R+ +A  VL + M   G  P+ ++YN ++ G C   +   A+ LL  M+  
Sbjct: 136 LLKGLCDAKRVGEAMGVLLRRMSELGCTPNVVSYNTLLKGFCDENRAEEALELLHMMADG 195

Query: 215 -VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
            V  C P++++YNT++   F  G+  +A   + D   +G PP ++TYTI+I+ +CK   +
Sbjct: 196 QVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVV 255

Query: 274 ARA-----------------------------------IEVLDDMAIEGCSPDIVTYNSL 298
            RA                                   + +L +M+  G  PD  TY  L
Sbjct: 256 DRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLL 315

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +++ CK+GK  +A  + ++++ +G++P+   Y  +LH   ++G    +   LD+M     
Sbjct: 316 LDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGI 375

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP  + +NI+     K  ++  A++ FN+M  +   P++V Y T++ ALCK G +++A  
Sbjct: 376 SPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAEL 435

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
             + +     +P ++ + +L+ GL      EKA  L+ +M+  GI P+ +   T++   C
Sbjct: 436 KFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLC 495

Query: 479 RADQVEEA---VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
              +V +A   +DL++ +G R + +   +Y  +I G C   K D A ++L++M+S   KP
Sbjct: 496 TEGRVMKAQRLIDLMERVGTRPDII---SYNALIRGHCLVGKTDEASKLLDIMLSVGLKP 552

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           ++  ++T++     DG  ++AY ++Q+++
Sbjct: 553 NECTYNTLLHGYCRDGRIDDAYSVFQEML 581



 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 230/479 (48%), Gaps = 37/479 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  F + G++  A  L   M  +   P+      +I GL +   +++A  V Q M+ 
Sbjct: 208 NTVINGFFTEGQVDKAYNLFLDMTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMID 267

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +TY  ++ G    GQ +  + +L EMS  G EPD  TY  +L  +   GK  +
Sbjct: 268 KGVRPNIVTYTCLIHGYLSIGQWKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTE 327

Query: 241 AIGFWKDQLRKGCPPYLITYTILIE----------------------------------- 265
           A   +   +RKG  P +  Y I++                                    
Sbjct: 328 ARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFC 387

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
              K+  I  A+++ + M  +G SP++V Y +L++  CK G+ DDA L  N +++ G+ P
Sbjct: 388 AFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAP 447

Query: 326 NSITYNTLLHSLGSRGCWD-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           N + + +L++ L +   W+ A +   +++N+  H P V  +N ++  LC  G V +A   
Sbjct: 448 NIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIH-PNVVFFNTIMCNLCTEGRVMKAQRL 506

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            + M     +PDI++YN ++   C  G  +EA +LL ++      P   TYNTL+ G  +
Sbjct: 507 IDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCR 566

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G ++ A  ++ +M+ NGI+P  +T+ T++ G  +  +  EA +L   +   G +     
Sbjct: 567 DGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYT 626

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           Y ++++GL K+  VD A+++ + + S   + D   F+ ++  +  DG  E+A  L+  +
Sbjct: 627 YNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATI 685



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 216/456 (47%), Gaps = 7/456 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMAR---RNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           N +L+ FC   +  +A +L+ +MA    R+  P+      +I G     +++KA  +   
Sbjct: 170 NTLLKGFCDENRAEEALELLHMMADGQVRSCPPNLVSYNTVINGFFTEGQVDKAYNLFLD 229

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+ +TY +++ GLCK   +  A  +  +M   G  P+++TY  ++      G+
Sbjct: 230 MTDQGIPPNVVTYTIVIDGLCKAQVVDRAEGVFQQMIDKGVRPNIVTYTCLIHGYLSIGQ 289

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           +K+ +   K+    G  P   TY +L++ +CK+     A ++ D M  +G  PD+  Y  
Sbjct: 290 WKEVVRMLKEMSAHGLEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGI 349

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++    +G   +    ++ ++  G+ PN   +N +  +   +        I + M +  
Sbjct: 350 ILHGYATKGALSEMHSFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQG 409

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP V  Y  LI+ LCK G VD A   FNQM+++   P+IV + +++  LC      +A 
Sbjct: 410 LSPNVVNYATLIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAG 469

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L   +      P ++ +NT++  L  +G + KA  L   M   G  PD I++  LI G 
Sbjct: 470 ELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGH 529

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C   + +EA  LL  +   G K     Y  ++HG C+  ++D A  V + M+S+   P  
Sbjct: 530 CLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVV 589

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI----EWKVF 569
             ++TI+  +       EA +L+  +I    +W ++
Sbjct: 590 VTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIY 625



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 216/453 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T   +L   C +GK T+A KL D M R+   PD      ++ G      + +  
Sbjct: 305 LEPDCFTYGLLLDYLCKKGKCTEARKLFDSMIRKGIKPDVSIYGIILHGYATKGALSEMH 364

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             L +MV +G  P+   +N++     K+  I  A+ + ++M   G  P+V+ Y T++  +
Sbjct: 365 SFLDLMVGNGISPNHYIFNIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDAL 424

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A   +   + +G  P ++ +T L+  +C      +A E+  +M  +G  P++
Sbjct: 425 CKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNV 484

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V +N+++   C +G+   A  +I+ +   G  P+ I+YN L+      G  D   K+LDI
Sbjct: 485 VFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDI 544

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P   TYN L++G C+ G +D A + F +M+S    P +VTYNT+L  L K   
Sbjct: 545 MLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRR 604

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            +EA +L   +  S     + TYN +++GL+K  C+++A+ ++  +    +  D IT   
Sbjct: 605 FSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNI 664

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I    +  + E+A++L   I   G     + YRL+   L +   ++    +   M  S 
Sbjct: 665 MIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSG 724

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             P+  + + +V+++   G    A     K+ E
Sbjct: 725 CAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDE 757



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 191/389 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +   F  +  + +A  + + M ++   P+      LI  L ++ R++ A      M+ 
Sbjct: 383 NIVFCAFAKKAMIGEAMDIFNKMRQQGLSPNVVNYATLIDALCKLGRVDDAELKFNQMIN 442

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ + +  +V GLC   +   A  L  EM   G  P+V+ +NTI+  +   G+  +
Sbjct: 443 EGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQGIHPNVVFFNTIMCNLCTEGRVMK 502

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A        R G  P +I+Y  LI   C       A ++LD M   G  P+  TYN+L++
Sbjct: 503 AQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLH 562

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ G+ DDA  V   +LS G+ P  +TYNT+LH L     +    ++   M  +    
Sbjct: 563 GYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQW 622

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +++TYNI++NGL K   VD A+  F  + SK+ Q DI+T+N ++GAL K+G   +A+ L 
Sbjct: 623 SIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLF 682

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++ +   P + TY  + + L ++G +E+   ++ +M ++G +P+ +    L+      
Sbjct: 683 ATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLR 742

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
             +  A   L +I ++   +  S   ++I
Sbjct: 743 GDISRAGAYLSKIDEKNFSLEASTTSMLI 771



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 172/377 (45%), Gaps = 4/377 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G++ DA    + M      P+     +L+ GL  ID+ EKA ++   MV  G
Sbjct: 420 LIDALCKLGRVDDAELKFNQMINEGVAPNIVVFTSLVYGLCTIDKWEKAGELFFEMVNQG 479

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ + +N ++  LC  G++  A  L+D M   G  PD+I+YN ++R     GK  +A 
Sbjct: 480 IHPNVVFFNTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEAS 539

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 L  G  P   TY  L+   C+   I  A  V  +M   G +P +VTYN++++  
Sbjct: 540 KLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGL 599

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K  ++ +A  +  N+++ G + +  TYN +L+ L    C D   K+   +        +
Sbjct: 600 FKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDI 659

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+NI+I  L K G  + A+N F  + +    PD+ TY  +   L +EG L E   +   
Sbjct: 660 ITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSE 719

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR--- 479
           +  S C+P  +  N L+  L  +G + +A     ++ E   S +  T   LI  F R   
Sbjct: 720 MEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEH 779

Query: 480 -ADQVEEAVDLLKEIGK 495
            A  + E    L E  K
Sbjct: 780 QAKSLPEKYHFLNEAKK 796



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 84/305 (27%), Positives = 153/305 (50%), Gaps = 1/305 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ N C+ G++  A +LID+M R    PD      LIRG   + + ++ASK+L IM+ 
Sbjct: 488 NTIMCNLCTEGRVMKAQRLIDLMERVGTRPDIISYNALIRGHCLVGKTDEASKLLDIMLS 547

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+  TYN ++ G C+ G+I  A ++  EM  +G  P V+TYNTIL  +F   +F +
Sbjct: 548 VGLKPNECTYNTLLHGYCRDGRIDDAYSVFQEMLSNGITPVVVTYNTILHGLFKTRRFSE 607

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + +  G    + TY I++  + K   +  A+++   +  +    DI+T+N ++ 
Sbjct: 608 AKELYLNMITSGKQWSIYTYNIILNGLSKNNCVDEALKMFQSLCSKDLQVDIITFNIMIG 667

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G+ +DA+ +   + + G+ P+  TY  +  +L   G  +  D +   M ++  +P
Sbjct: 668 ALLKDGRKEDAMNLFATISANGLVPDVTTYRLIAENLIEEGSLEEFDGMFSEMEKSGCAP 727

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL-QL 419
                N L+  L   G + RA    +++  KN   +  T + ++    +E    ++L + 
Sbjct: 728 NSLMLNFLVRRLLLRGDISRAGAYLSKIDEKNFSLEASTTSMLISLFSREEHQAKSLPEK 787

Query: 420 LHLLN 424
            H LN
Sbjct: 788 YHFLN 792



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 56/259 (21%), Positives = 116/259 (44%), Gaps = 3/259 (1%)

Query: 84  VLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           +++ N  +RG  +  K+ + S  L       ++ +E T N +L  +C  G++ DA  +  
Sbjct: 519 IISYNALIRGHCLVGKTDEASKLLDIMLSVGLKPNECTYNTLLHGYCRDGRIDDAYSVFQ 578

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            M      P       ++ GL +  R  +A ++   M+ SG      TYN+++ GL K  
Sbjct: 579 EMLSNGITPVVVTYNTILHGLFKTRRFSEAKELYLNMITSGKQWSIYTYNIILNGLSKNN 638

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
            +  A+ +   +     + D+IT+N ++  +  +G+ + A+  +      G  P + TY 
Sbjct: 639 CVDEALKMFQSLCSKDLQVDIITFNIMIGALLKDGRKEDAMNLFATISANGLVPDVTTYR 698

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           ++ E + ++  +     +  +M   GC+P+ +  N LV     +G    A   ++ +  +
Sbjct: 699 LIAENLIEEGSLEEFDGMFSEMEKSGCAPNSLMLNFLVRRLLLRGDISRAGAYLSKIDEK 758

Query: 322 GMEPNSITYNTLLHSLGSR 340
                + T  ++L SL SR
Sbjct: 759 NFSLEAST-TSMLISLFSR 776


>gi|296081998|emb|CBI21003.3| unnamed protein product [Vitis vinifera]
          Length = 837

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 235/460 (51%), Gaps = 5/460 (1%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRI 165
           + DG F   ++ T + +++  C+ G +  AS+L   M + N IP   F +N L+RG ++ 
Sbjct: 352 TEDGLFP--NKVTYSVLIEGCCNSGNIEKASELYTQM-KLNGIPPSVFNVNSLLRGYLKA 408

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
              E+ASK+    V   GV +  TYN+M+  LCK G++  A +LLD M   G  P+V++Y
Sbjct: 409 PLWEEASKLFDEAV-DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 467

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N ++      G    A   + D L +   P ++TY+ILI+   K+    +A+++ D M  
Sbjct: 468 NDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 527

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
              +P   T+N+++N  CK G+  +A   + N L  G  P+ +TYN+++      G  D+
Sbjct: 528 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 587

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              +   M E   SP V TY  LING CK   +D A+ + ++M  K  + D+  Y+ ++ 
Sbjct: 588 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 647

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             CK   +  A  L   L     SP  I YN++I G      ME A+V Y +M+ + I  
Sbjct: 648 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 707

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D  T+ TLI G  +  ++  A DL  E+  +G       + ++++GLC   +++ A ++L
Sbjct: 708 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 767

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           E M      P   +++T++     +G  +EA+ L  ++++
Sbjct: 768 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD 807



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 237/446 (53%), Gaps = 1/446 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+Q  C +       +L++ M  R  +P      ++I   +    + +A ++ + M+  G
Sbjct: 261 IIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCG 320

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              + +    ++ G C +G + SA+ L ++++  G  P+ +TY+ ++    ++G  ++A 
Sbjct: 321 KPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKAS 380

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +      G PP +     L+    K      A ++ D+ A++    +I TYN ++++ 
Sbjct: 381 ELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE-AVDCGVANIFTYNIMMSWL 439

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK GK D+A  +++N++++GM PN ++YN ++     +G  D    +   M      P V
Sbjct: 440 CKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV 499

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ILI+G  K G  ++A++ F+QM+S N  P   T+NT++  LCK G ++EA   L  
Sbjct: 500 VTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKN 559

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
                  P  +TYN+++DG  K+G ++ A+ +Y +M E G+SP+ +T+ +LI GFC++++
Sbjct: 560 FLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR 619

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++ A+    E+ ++G ++  +AY  +I G CK + ++ A  +   ++     P+  V+++
Sbjct: 620 IDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNS 679

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++    D    E A   ++K+I  ++
Sbjct: 680 MISGFRDLNNMEAALVWYKKMINDRI 705



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 194/399 (48%), Gaps = 35/399 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK+ +A  L+D M  +  +P+     ++I G  R   ++ AS V   M
Sbjct: 431 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 490

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +     P+ +TY++++ G  K+G    A+ L D+M      P   T+NTI+  +   G+ 
Sbjct: 491 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 550

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A    K+ L +G  P  +TY  +++   K+  I  A+ V  +M   G SP++VTY SL
Sbjct: 551 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 610

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK  + D A+   + +  +G+E +   Y+ L+     R   ++   +   + E   
Sbjct: 611 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 670

Query: 359 SPTVFTYN-----------------------------------ILINGLCKYGLVDRAIN 383
           SP    YN                                    LI+GL K G +  A +
Sbjct: 671 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 730

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            + +M+SK   PDI+T++ ++  LC +G L  A ++L  ++  + +P ++ YNTLI G  
Sbjct: 731 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 790

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++G +++A  L+ +M++ G+ PDD+T+  LI G  + D+
Sbjct: 791 REGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 829



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 211/487 (43%), Gaps = 36/487 (7%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D +  N +L  +    ++ +A    + M  ++ IP   +   L+  L+R + I +   
Sbjct: 147 ELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRD 206

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   MV+ G   D  T ++MV    K G++  A     E    G + D   Y+ I++ + 
Sbjct: 207 LYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVC 266

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
                   +   ++   +G  P   T+T +I     Q  +  A+ + ++M   G   ++V
Sbjct: 267 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 326

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY----------------------- 330
              SL+   C QG  D A+ + N +   G+ PN +TY                       
Sbjct: 327 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 386

Query: 331 ------------NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
                       N+LL        W+   K+ D   +   +  +FTYNI+++ LCK G +
Sbjct: 387 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKM 445

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A +  + MV++   P++V+YN ++   C++G ++ A  +   +      P ++TY+ L
Sbjct: 446 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 505

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           IDG  KKG  EKA+ L+ QM+   I+P D T  T+I G C+  Q+ EA D LK   + G 
Sbjct: 506 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 565

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 Y  ++ G  K   +D A+ V   M      P+   +++++         + A K
Sbjct: 566 IPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 625

Query: 559 LWQKLIE 565
              ++ E
Sbjct: 626 TRDEMRE 632



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 11/127 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCINLIRGLIRIDRIEKAS 172
           D  T   ++      G+L  AS L   M  +  +PD   FH  +N   GL    ++E A 
Sbjct: 708 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVN---GLCNKGQLENAR 764

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L+ M      P  + YN ++ G  + G ++ A  L DEM   G  PD +TY+ ++   
Sbjct: 765 KILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI--- 821

Query: 233 FDNGKFK 239
             NGKFK
Sbjct: 822 --NGKFK 826



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 94/210 (44%)

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           +N L+N   +   ++ AI+ FN M+ ++  P +   N +L AL +  M+ E   L + + 
Sbjct: 153 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 212

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                    T + ++    K+G +E+A   + +  E G+  D   +  +I   C+     
Sbjct: 213 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 272

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
             ++LL+E+ +RG     + +  VI        +  A+++ E MI+     +  V ++++
Sbjct: 273 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 332

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           K     G  + A  L+ K+ E  +F    T
Sbjct: 333 KGYCAQGNLDSALNLFNKITEDGLFPNKVT 362


>gi|297607630|ref|NP_001060305.2| Os07g0621100 [Oryza sativa Japonica Group]
 gi|255677977|dbj|BAF22219.2| Os07g0621100 [Oryza sativa Japonica Group]
          Length = 734

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 207/454 (45%), Gaps = 74/454 (16%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS---GCEPDVITYNTILRTMFDNGKFKQ 240
           V D ++YN ++  LC+RG    A ALL  MS+     C P+ ++Y  ++R +  +    Q
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+G  +     G    ++TY  LI  +C    + +A+E++ +M   G  P++V Y+SL+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+++D   V   +  +G+EP+ + Y  L+ SL   G       ++D+M      P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT------------------ 402
            V TYN+LIN +CK G V  AI    +M  K   PD+VTYNT                  
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 403 -------------------VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
                              V+  LC  G + +A Q+  ++  + C   L+TYN LI GL 
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG------ 497
           +   + KAM L  +M   G+ PD  T+  LI GFC+  QV+ A DLL  +  RG      
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 498 ----------------------NKMRNS------AYRLVIHGLCKSKKVDMAIQVLELMI 529
                                 N+M N+      AY  +IHG CK+  +  A ++L+ ++
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                PD   +S ++   A  G  E A  + +++
Sbjct: 494 DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 124/410 (30%), Positives = 219/410 (53%), Gaps = 5/410 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LIRGL     ++KA +++  M  SG  P+ + Y+ ++ G CK G+      +  EMS  G
Sbjct: 156 LIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEKG 215

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            EPDV+ Y  ++ ++   GK K+A G     +R+G  P ++TY +LI  +CK+  +  AI
Sbjct: 216 IEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEAI 275

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG---MEPNSITYNTLL 334
            VL  M+ +G +PD+VTYN+L+       + D+A+ ++  ++ RG   ++PN +T+N+++
Sbjct: 276 GVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSVI 334

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
             L   G      ++  +M E      + TYN+LI GL +   V +A+   ++M S   +
Sbjct: 335 QGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLE 394

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD  TY+ ++   CK   ++ A  LL  +      P L  Y  L+  + ++G ME+A  L
Sbjct: 395 PDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNL 454

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M +N    D + + T+I G C+A  ++ A +LLK I   G       Y +VI+   K
Sbjct: 455 FNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAK 513

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           S  ++ A  VL+ M +S + PD  VF ++++  +  G   +  +L +++I
Sbjct: 514 SGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 202/375 (53%), Gaps = 3/375 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + +LQ +C  G+  D  K+   M+ +   PD      LI  L ++ + +KA  V+ +MV 
Sbjct: 189 SSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR 248

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +TYN+++  +CK G ++ AI +L +MS  G  PDV+TYNT+++ + D  +  +
Sbjct: 249 RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDE 308

Query: 241 AIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           A+   ++ +R      P ++T+  +I+ +C    + +A +V   M   GC  ++VTYN L
Sbjct: 309 AMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    +  K   A+ +++ + S G+EP+S TY+ L+         D  + +L  M +   
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +F Y  L+  +C+ G+++RA N FN+M   N   D+V Y+T++   CK G L  A +
Sbjct: 429 EPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKE 487

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +     +P  +TY+ +I+  AK G ME A  +  QM  +G  PD     +LI G+ 
Sbjct: 488 LLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547

Query: 479 RADQVEEAVDLLKEI 493
              ++ + ++L++E+
Sbjct: 548 TKGEINKVLELIREM 562



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 120/435 (27%), Positives = 215/435 (49%), Gaps = 7/435 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   +++  C   ++  A +L+  M      P+     +L++G  +  R E   
Sbjct: 146 VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVG 205

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KV   M   G  PD + Y  ++  LCK G+ + A  ++D M   G EP+V+TYN ++  M
Sbjct: 206 KVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG---CS 289
              G  K+AIG  K    KG  P ++TY  LI+ +     +  A+ +L++M + G     
Sbjct: 266 CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM-VRGKNIVK 324

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++VT+NS++   C  G+   A  V   +   G   N +TYN L+  L          ++
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL 384

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           +D M      P  FTY+ILI G CK   VDRA +  + M  +  +P++  Y  +L A+C+
Sbjct: 385 MDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCE 444

Query: 410 EGMLNEALQLLHLLNGSSCSPC-LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           +GM+  A  L + ++ +   P  ++ Y+T+I G  K G ++ A  L   +++ G++PD +
Sbjct: 445 QGMMERARNLFNEMDNN--FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAV 502

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  +I  F ++  +E A  +LK++   G     + +  +I G     +++  ++++  M
Sbjct: 503 TYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562

Query: 529 ISSRYKPDDTVFSTI 543
           I+     D  + ST+
Sbjct: 563 ITKNIALDSKIISTL 577



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 80/313 (25%), Positives = 159/313 (50%), Gaps = 6/313 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEK 170
           V  D  T N +++      ++ +A  L++ M R   I  P+     ++I+GL  I R+ +
Sbjct: 286 VAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQ 345

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A +V  +M  +G + + +TYN+++GGL +  ++R A+ L+DEM+  G EPD  TY+ +++
Sbjct: 346 AFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIK 405

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                 +  +A         +G  P L  Y  L+  +C+Q  + RA  + ++M       
Sbjct: 406 GFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARNLFNEMD-NNFPL 464

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+V Y+++++ +CK G    A  ++ +++  G+ P+++TY+ +++     G  +A + +L
Sbjct: 465 DVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVL 524

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M  +   P V  ++ LI G    G +++ +    +M++KN   D    +T+  +L   
Sbjct: 525 KQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMITKNIALDSKIISTLSTSLVAS 584

Query: 411 GMLNEALQLLHLL 423
              NE   LL  L
Sbjct: 585 ---NEGKALLQSL 594



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 128/245 (52%), Gaps = 3/245 (1%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAI 382
           ++++YNT+L +L  RG  D    +L  M+   H    P   +Y +L+  LC   L D+A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                M S   + D+VTY T++  LC    +++A++L+  +  S   P ++ Y++L+ G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K G  E    ++ +M E GI PD + +  LI   C+  + ++A  ++  + +RG +   
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y ++I+ +CK   V  AI VL+ M      PD   ++T++K ++D    +EA  L ++
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 563 LIEWK 567
           ++  K
Sbjct: 316 MVRGK 320


>gi|297746120|emb|CBI16176.3| unnamed protein product [Vitis vinifera]
          Length = 819

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 132/489 (26%), Positives = 231/489 (47%), Gaps = 44/489 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  ++  C   ++ +A ++ ++++ +    D      L+ GL +++  E   +++  M
Sbjct: 252 TYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEM 311

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G VP     + +V GL K+G I SA  L++++   G  P +  YN ++ +M  +GK 
Sbjct: 312 IEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKL 371

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ---------------------------- 270
            +A   + +   KG  P  +TY+ILI+  CK+                            
Sbjct: 372 DEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSL 431

Query: 271 ----CGIAR---AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
               C + +   A  + D+M   G  P++V Y SL++  CK+G+  +A  + + +  +G+
Sbjct: 432 ISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGI 491

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN+ T+  L+  L         +K+   M E +  P   TYN+LI G CK G   RA  
Sbjct: 492 SPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFE 551

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG--------SSCSPCLITY 435
             ++MV K   PD  TY  ++  LC  G ++EA + ++ L G          C P ++TY
Sbjct: 552 LLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTY 611

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
             LI+GL K G M+KA +L  +M+ +   P+  T+   +        +E+A+  L ++  
Sbjct: 612 TALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQ-LHDVLL 670

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G       Y ++I G CK  ++  A +VL  MI S   PD   +STI+ +    G  +E
Sbjct: 671 EGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKE 730

Query: 556 AYKLWQKLI 564
           A KLW+ ++
Sbjct: 731 AIKLWESML 739



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/437 (27%), Positives = 220/437 (50%), Gaps = 8/437 (1%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A  L D +      PD +    ++R L  +    +A +V+  M  SG      TYN+ + 
Sbjct: 199 ALHLFDEIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIR 258

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
           GLCK  ++  A+ + + +S  G   DV TY T++  +    +F+       + +  G  P
Sbjct: 259 GLCKNQRVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVP 318

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
                + L++ + K+  I  A ++++ +   G +P +  YN+L+N  CK GK D+A  + 
Sbjct: 319 SEAAVSNLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLF 378

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           NN+  +G+ PN +TY+ L+ S   RG  D     L  M E     TV+ Y+ LI+G CK 
Sbjct: 379 NNMGHKGLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKL 438

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G +  A + F++M++   +P++V Y +++   CKEG L+ A +L H + G   SP   T+
Sbjct: 439 GKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTF 498

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
             LI GL     M +A  L+G+M+E  + P+++T+  LI G C+      A +LL E+ +
Sbjct: 499 TALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE 558

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK--------PDDTVFSTIVKKV 547
           +G       YR +I GLC + +V  A + +  +   + K        P+   ++ ++  +
Sbjct: 559 KGLVPDTYTYRPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGL 618

Query: 548 ADDGMTEEAYKLWQKLI 564
              G+ ++A  L ++++
Sbjct: 619 CKIGLMDKAELLCREML 635



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 223/437 (51%), Gaps = 19/437 (4%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N ++ + C  GKL +A  L + M  +   P D  + I LI    +  +++ A   L  M 
Sbjct: 359 NALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSI-LIDSFCKRGKLDVALHFLGKMT 417

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G       Y+ ++ G CK G++R+A +L DEM  +G +P+V+ Y +++      G+  
Sbjct: 418 EVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSLISGYCKEGELH 477

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            A   + +   KG  P   T+T LI  +C    +A A ++  +M      P+ VTYN L+
Sbjct: 478 NAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNVIPNEVTYNVLI 537

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              CK+G    A  +++ ++ +G+ P++ TY  L+  L S G    V +  + MN+    
Sbjct: 538 EGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTG---RVSEAREFMNDLQGE 594

Query: 360 -----------PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
                      P V TY  LINGLCK GL+D+A     +M++ N  P+  TY   L  L 
Sbjct: 595 QQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYACFLDYLT 654

Query: 409 KEGMLNEALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            EG + +A+QL   LL G   +   +TYN LI G  K G +++A  +   M+++GISPD 
Sbjct: 655 SEGNIEKAIQLHDVLLEGFLANT--VTYNILIRGFCKLGRIQEAAEVLVNMIDSGISPDC 712

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           I++ T+I+ +CR   ++EA+ L + +  RG      AY  +I+G C + ++  A ++ + 
Sbjct: 713 ISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAFELRDD 772

Query: 528 MISSRYKPDDTVFSTIV 544
           M+    KP+   +++++
Sbjct: 773 MMRRGVKPNRATYNSLI 789



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/392 (26%), Positives = 202/392 (51%)

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V+++M+  G +P   T + ++ GL +  Q R A+ L DE+  SG  PDV  Y  ++R++ 
Sbjct: 167 VVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSGLRPDVYVYTAVVRSLC 226

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +   F +A          GC   + TY + I  +CK   +  A+E+ + ++ +G   D+ 
Sbjct: 227 ELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAVEIKNLLSYKGLRADVG 286

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +LV   CK  +++    ++N ++  G  P+    + L+  L  +G   +   +++ +
Sbjct: 287 TYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGLRKKGNIGSAFDLVNKV 346

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +   +P++F YN LIN +CK G +D A + FN M  K   P+ VTY+ ++ + CK G L
Sbjct: 347 KKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPNDVTYSILIDSFCKRGKL 406

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + AL  L  +        +  Y++LI G  K G +  A  L+ +M+ NG+ P+ + + +L
Sbjct: 407 DVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDEMIANGLKPNVVIYTSL 466

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G+C+  ++  A  L  E+  +G       +  +I GLC + ++  A ++   M+    
Sbjct: 467 ISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANRMAEANKLFGEMVEWNV 526

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            P++  ++ +++    +G T  A++L  +++E
Sbjct: 527 IPNEVTYNVLIEGHCKEGNTVRAFELLDEMVE 558



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 185/416 (44%), Gaps = 44/416 (10%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T + ++ +FC RGKL  A   +  M         +   +LI G  ++ ++  A  + 
Sbjct: 389 NDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLF 448

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ +G  P+ + Y  ++ G CK G++ +A  L  EM+  G  P+  T+  ++  +   
Sbjct: 449 DEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHA 508

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA----------- 284
            +  +A   + + +     P  +TY +LIE  CK+    RA E+LD+M            
Sbjct: 509 NRMAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTY 568

Query: 285 --------------------------------IEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
                                           IEGC P++VTY +L+N  CK G  D A 
Sbjct: 569 RPLISGLCSTGRVSEAREFMNDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAE 628

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
           L+   +L+    PN  TY   L  L S G  +   ++ D++ E   + TV TYNILI G 
Sbjct: 629 LLCREMLASNSLPNQNTYACFLDYLTSEGNIEKAIQLHDVLLEGFLANTV-TYNILIRGF 687

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G +  A      M+     PD ++Y+T++   C+ G L EA++L   +     +P  
Sbjct: 688 CKLGRIQEAAEVLVNMIDSGISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDT 747

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           + YN LI G    G + KA  L   MM  G+ P+  T+ +LI G C    V    D
Sbjct: 748 VAYNFLIYGCCVTGELTKAFELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTAD 803



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 197/441 (44%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++Q +    +  D   ++ +M     +P       ++ GLIRI +   A  +   +V SG
Sbjct: 151 LIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFDEIVSSG 210

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD   Y  +V  LC+      A  ++  M  SGC+  V TYN  +R +  N +  +A+
Sbjct: 211 LRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQRVWEAV 270

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG    + TY  L+  +CK        E++++M   G  P     ++LV+  
Sbjct: 271 EIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVSNLVDGL 330

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+G    A  ++N +   G+ P+   YN L++S+   G  D  + + + M      P  
Sbjct: 331 RKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHKGLFPND 390

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ILI+  CK G +D A++   +M     +  +  Y++++   CK G L  A  L   
Sbjct: 391 VTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAAKSLFDE 450

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  +   P ++ Y +LI G  K+G +  A  LY +M   GISP+  T   LI G C A++
Sbjct: 451 MIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISGLCHANR 510

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + EA  L  E+ +         Y ++I G CK      A ++L+ M+     PD   +  
Sbjct: 511 MAEANKLFGEMVEWNVIPNEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRP 570

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++  +   G   EA +    L
Sbjct: 571 LISGLCSTGRVSEAREFMNDL 591



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 96/388 (24%), Positives = 183/388 (47%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T+ +++++    +  +    + ++  M   G  P + T + +L  +    +F+ A+  + 
Sbjct: 145 TLGFDLLIQTYVQNRRELDGLVVVRLMMDCGILPQIRTLSGVLNGLIRIRQFRMALHLFD 204

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           + +  G  P +  YT ++  +C+     RA EV+  M   GC   + TYN  +   CK  
Sbjct: 205 EIVSSGLRPDVYVYTAVVRSLCELKDFIRAREVIGRMESSGCDLSVATYNVFIRGLCKNQ 264

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           +  +AV + N L  +G+  +  TY TL+  L     ++A +++++ M E    P+    +
Sbjct: 265 RVWEAVEIKNLLSYKGLRADVGTYCTLVLGLCKVEEFEAGEEMMNEMIEFGFVPSEAAVS 324

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L++GL K G +  A +  N++      P +  YN ++ ++CK+G L+EA  L + +   
Sbjct: 325 NLVDGLRKKGNIGSAFDLVNKVKKFGVAPSLFVYNALINSMCKDGKLDEAESLFNNMGHK 384

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P  +TY+ LID   K+G ++ A+   G+M E GI      + +LI G C+  ++  A
Sbjct: 385 GLFPNDVTYSILIDSFCKRGKLDVALHFLGKMTEVGIKATVYPYSSLISGHCKLGKLRAA 444

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             L  E+   G K     Y  +I G CK  ++  A ++   M      P+   F+ ++  
Sbjct: 445 KSLFDEMIANGLKPNVVIYTSLISGYCKEGELHNAFRLYHEMTGKGISPNTYTFTALISG 504

Query: 547 VADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +       EA KL+ +++EW V     T
Sbjct: 505 LCHANRMAEANKLFGEMVEWNVIPNEVT 532



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/279 (29%), Positives = 136/279 (48%), Gaps = 9/279 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N +++  C  G    A +L+D M  +  +PD +    LI GL    R+ +A + +
Sbjct: 529 NEVTYNVLIEGHCKEGNTVRAFELLDEMVEKGLVPDTYTYRPLISGLCSTGRVSEAREFM 588

Query: 176 --------QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
                   ++  + G +P+ +TY  ++ GLCK G +  A  L  EM  S   P+  TY  
Sbjct: 589 NDLQGEQQKLNEIEGCLPNVVTYTALINGLCKIGLMDKAELLCREMLASNSLPNQNTYAC 648

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
            L  +   G  ++AI    D L +G     +TY ILI   CK   I  A EVL +M   G
Sbjct: 649 FLDYLTSEGNIEKAIQL-HDVLLEGFLANTVTYNILIRGFCKLGRIQEAAEVLVNMIDSG 707

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
            SPD ++Y++++   C++G   +A+ +  ++L+RG+ P+++ YN L++     G      
Sbjct: 708 ISPDCISYSTIIYEYCRRGDLKEAIKLWESMLNRGVNPDTVAYNFLIYGCCVTGELTKAF 767

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           ++ D M      P   TYN LI+G C    V    + F+
Sbjct: 768 ELRDDMMRRGVKPNRATYNSLIHGTCLMSSVSSTADYFS 806


>gi|359476104|ref|XP_003631789.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Vitis vinifera]
          Length = 877

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 136/460 (29%), Positives = 235/460 (51%), Gaps = 5/460 (1%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRI 165
           + DG F   ++ T + +++  C+ G +  AS+L   M + N IP   F +N L+RG ++ 
Sbjct: 392 TEDGLFP--NKVTYSVLIEGCCNSGNIEKASELYTQM-KLNGIPPSVFNVNSLLRGYLKA 448

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
              E+ASK+    V   GV +  TYN+M+  LCK G++  A +LLD M   G  P+V++Y
Sbjct: 449 PLWEEASKLFDEAV-DCGVANIFTYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSY 507

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N ++      G    A   + D L +   P ++TY+ILI+   K+    +A+++ D M  
Sbjct: 508 NDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLS 567

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
              +P   T+N+++N  CK G+  +A   + N L  G  P+ +TYN+++      G  D+
Sbjct: 568 LNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDS 627

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              +   M E   SP V TY  LING CK   +D A+ + ++M  K  + D+  Y+ ++ 
Sbjct: 628 ALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALKTRDEMREKGLELDVTAYSALID 687

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             CK   +  A  L   L     SP  I YN++I G      ME A+V Y +M+ + I  
Sbjct: 688 GFCKRRDMESAQDLFFELLEVGLSPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPC 747

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D  T+ TLI G  +  ++  A DL  E+  +G       + ++++GLC   +++ A ++L
Sbjct: 748 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKIL 807

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           E M      P   +++T++     +G  +EA+ L  ++++
Sbjct: 808 EEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLD 847



 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 116/446 (26%), Positives = 237/446 (53%), Gaps = 1/446 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+Q  C +       +L++ M  R  +P      ++I   +    + +A ++ + M+  G
Sbjct: 301 IIQAVCKKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCG 360

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              + +    ++ G C +G + SA+ L ++++  G  P+ +TY+ ++    ++G  ++A 
Sbjct: 361 KPMNLVVATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKAS 420

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +      G PP +     L+    K      A ++ D+ A++    +I TYN ++++ 
Sbjct: 421 ELYTQMKLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDE-AVDCGVANIFTYNIMMSWL 479

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK GK D+A  +++N++++GM PN ++YN ++     +G  D    +   M      P V
Sbjct: 480 CKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNV 539

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ILI+G  K G  ++A++ F+QM+S N  P   T+NT++  LCK G ++EA   L  
Sbjct: 540 VTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKN 599

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
                  P  +TYN+++DG  K+G ++ A+ +Y +M E G+SP+ +T+ +LI GFC++++
Sbjct: 600 FLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNR 659

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++ A+    E+ ++G ++  +AY  +I G CK + ++ A  +   ++     P+  V+++
Sbjct: 660 IDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGLSPNRIVYNS 719

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++    D    E A   ++K+I  ++
Sbjct: 720 MISGFRDLNNMEAALVWYKKMINDRI 745



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/399 (27%), Positives = 194/399 (48%), Gaps = 35/399 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK+ +A  L+D M  +  +P+     ++I G  R   ++ AS V   M
Sbjct: 471 TYNIMMSWLCKGGKMDEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDM 530

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +     P+ +TY++++ G  K+G    A+ L D+M      P   T+NTI+  +   G+ 
Sbjct: 531 LARDLKPNVVTYSILIDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQM 590

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A    K+ L +G  P  +TY  +++   K+  I  A+ V  +M   G SP++VTY SL
Sbjct: 591 SEARDKLKNFLEEGFIPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSL 650

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK  + D A+   + +  +G+E +   Y+ L+     R   ++   +   + E   
Sbjct: 651 INGFCKSNRIDLALKTRDEMREKGLELDVTAYSALIDGFCKRRDMESAQDLFFELLEVGL 710

Query: 359 SPTVFTYN-----------------------------------ILINGLCKYGLVDRAIN 383
           SP    YN                                    LI+GL K G +  A +
Sbjct: 711 SPNRIVYNSMISGFRDLNNMEAALVWYKKMINDRIPCDLGTYTTLIDGLLKEGRLVFASD 770

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            + +M+SK   PDI+T++ ++  LC +G L  A ++L  ++  + +P ++ YNTLI G  
Sbjct: 771 LYMEMLSKGIVPDIITFHVLVNGLCNKGQLENARKILEEMDRKNMTPSVLIYNTLIAGYF 830

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++G +++A  L+ +M++ G+ PDD+T+  LI G  + D+
Sbjct: 831 REGNLKEAFTLHDEMLDRGLVPDDVTYDILINGKFKGDR 869



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 211/487 (43%), Gaps = 36/487 (7%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D +  N +L  +    ++ +A    + M  ++ IP   +   L+  L+R + I +   
Sbjct: 187 ELDHRVFNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRD 246

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   MV+ G   D  T ++MV    K G++  A     E    G + D   Y+ I++ + 
Sbjct: 247 LYNKMVLRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVC 306

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
                   +   ++   +G  P   T+T +I     Q  +  A+ + ++M   G   ++V
Sbjct: 307 KKPNSNLGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLV 366

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY----------------------- 330
              SL+   C QG  D A+ + N +   G+ PN +TY                       
Sbjct: 367 VATSLMKGYCAQGNLDSALNLFNKITEDGLFPNKVTYSVLIEGCCNSGNIEKASELYTQM 426

Query: 331 ------------NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
                       N+LL        W+   K+ D   +   +  +FTYNI+++ LCK G +
Sbjct: 427 KLNGIPPSVFNVNSLLRGYLKAPLWEEASKLFDEAVDCGVA-NIFTYNIMMSWLCKGGKM 485

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A +  + MV++   P++V+YN ++   C++G ++ A  +   +      P ++TY+ L
Sbjct: 486 DEACSLLDNMVNQGMVPNVVSYNDMILGHCRKGNMDMASSVFSDMLARDLKPNVVTYSIL 545

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           IDG  KKG  EKA+ L+ QM+   I+P D T  T+I G C+  Q+ EA D LK   + G 
Sbjct: 546 IDGNFKKGDSEKALDLFDQMLSLNIAPTDFTFNTIINGLCKVGQMSEARDKLKNFLEEGF 605

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 Y  ++ G  K   +D A+ V   M      P+   +++++         + A K
Sbjct: 606 IPSCMTYNSIVDGFIKEGNIDSALAVYREMCEFGVSPNVVTYTSLINGFCKSNRIDLALK 665

Query: 559 LWQKLIE 565
              ++ E
Sbjct: 666 TRDEMRE 672



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 40/127 (31%), Positives = 60/127 (47%), Gaps = 11/127 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCINLIRGLIRIDRIEKAS 172
           D  T   ++      G+L  AS L   M  +  +PD   FH  +N   GL    ++E A 
Sbjct: 748 DLGTYTTLIDGLLKEGRLVFASDLYMEMLSKGIVPDIITFHVLVN---GLCNKGQLENAR 804

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L+ M      P  + YN ++ G  + G ++ A  L DEM   G  PD +TY+ ++   
Sbjct: 805 KILEEMDRKNMTPSVLIYNTLIAGYFREGNLKEAFTLHDEMLDRGLVPDDVTYDILI--- 861

Query: 233 FDNGKFK 239
             NGKFK
Sbjct: 862 --NGKFK 866



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 46/210 (21%), Positives = 94/210 (44%)

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           +N L+N   +   ++ AI+ FN M+ ++  P +   N +L AL +  M+ E   L + + 
Sbjct: 193 FNYLLNAYIRANRIENAIDCFNAMICQDVIPWVPYMNILLTALVRRNMIGELRDLYNKMV 252

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                    T + ++    K+G +E+A   + +  E G+  D   +  +I   C+     
Sbjct: 253 LRGIYGDHFTVHVMVRACLKEGRVEEAEEYFRETKERGVKLDAGAYSIIIQAVCKKPNSN 312

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
             ++LL+E+ +RG     + +  VI        +  A+++ E MI+     +  V ++++
Sbjct: 313 LGLELLEEMKERGWVPSEATFTSVIVACVAQGNMVEALRLKEEMINCGKPMNLVVATSLM 372

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           K     G  + A  L+ K+ E  +F    T
Sbjct: 373 KGYCAQGNLDSALNLFNKITEDGLFPNKVT 402


>gi|255570715|ref|XP_002526312.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534393|gb|EEF36101.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 729

 Score =  208 bits (530), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 134/467 (28%), Positives = 219/467 (46%), Gaps = 35/467 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L +FC  G++  A  L+  M  R   P       LI GL +   +++A  ++Q M
Sbjct: 239 TYNTMLHSFCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEM 298

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G      TYN ++ G CK+G +  A+AL +EM   G  P V ++NTI+      GK 
Sbjct: 299 AKAGLRVSPYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKM 358

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A     D L+K   P +I+Y  LI   C+   I  A  +LD++     S +IVTYN+L
Sbjct: 359 SDARQQLSDMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTL 418

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C+ G  + A+ +  ++++RG+ P+ +TY  L++     G      +  D M     
Sbjct: 419 IDGLCRLGDLETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGL 478

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P  F Y   I G  K G   +A     +M++K   PD++TYN  +  LCK G L EA +
Sbjct: 479 APDQFAYTARIVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGE 538

Query: 419 LL---------------------HLLNGS--------------SCSPCLITYNTLIDGLA 443
           LL                     H+ NG                 +P ++TY  LI   A
Sbjct: 539 LLQKMIRDGHVPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHA 598

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
             G ++ AM  + +M E G+ P+ IT+  LI GFC+  ++++A     E+ ++G      
Sbjct: 599 LNGRLDWAMAYFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKY 658

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            Y ++I+  C   K   A+++   M+  R +PD      ++KK+  D
Sbjct: 659 TYTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKD 705



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 113/427 (26%), Positives = 212/427 (49%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           + + M R   +PD   C  +++ L   + + KA +V ++M   G  P   TYN M+   C
Sbjct: 189 VFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHSFC 248

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K G+++ A+ L+ +M   GC P  +T+N ++  +   G+ +QA G  ++  + G      
Sbjct: 249 KGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVSPY 308

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY  LI   CK+  +  A+ + ++M   G SP + ++N+++   CK+GK  DA   ++++
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L + + P+ I+YNTL++     G       +LD +   + S  + TYN LI+GLC+ G +
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + A+     M+++   PD+VTY  ++   CK G +  A +    +     +P    Y   
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I G  K G   KA  L  +M+  G  PD IT+   + G C+   +EEA +LL+++ + G+
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGH 548

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
              +  Y   +H   ++  +    ++   M+S    P    ++ ++   A +G  + A  
Sbjct: 549 VPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMA 608

Query: 559 LWQKLIE 565
            + ++ E
Sbjct: 609 YFLEMQE 615



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 195/411 (47%), Gaps = 1/411 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C +G L +A  L + M  R   P       ++ G  +  ++  A + L  M
Sbjct: 309 TYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLSDM 368

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +    +PD I+YN ++ G C+ G I  A  LLDE+       +++TYNT++  +   G  
Sbjct: 369 LKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLGDL 428

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A+   +D + +G  P ++TYT+L+   CK   +  A E  D+M   G +PD   Y + 
Sbjct: 429 ETALKLKEDMINRGIHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTAR 488

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K G    A  +   +L++G  P+ ITYN  ++ L   G  +   ++L  M    H
Sbjct: 489 IVGELKLGDTAKAFKLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGH 548

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY   ++   + G +      F  M+S+   P +VTY  ++ A    G L+ A+ 
Sbjct: 549 VPDHVTYTSFMHAHMENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMA 608

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               +      P +ITYN LI+G  K   M++A   + +M E GI P+  T+  LI   C
Sbjct: 609 YFLEMQEKGVVPNVITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYTYTILINENC 668

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              + +EA+ L  ++  +  +  +  +  ++  L K  KV  A+Q +E +I
Sbjct: 669 NMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYKVQ-AVQFIESLI 718



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 133/311 (42%), Gaps = 36/311 (11%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T   ++   C  G +  A +  D M      PD       I G +++    KA 
Sbjct: 443 IHPDVVTYTVLVNGACKLGNMLMAKEFFDEMLHVGLAPDQFAYTARIVGELKLGDTAKAF 502

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+ + M+  G  PD ITYN+ V GLCK G +  A  LL +M   G  PD +TY + +   
Sbjct: 503 KLQEEMLTKGFPPDVITYNVFVNGLCKLGNLEEAGELLQKMIRDGHVPDHVTYTSFMHAH 562

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            +NG  ++    + D L +G  P ++TYT+LI        +  A+    +M  +G  P++
Sbjct: 563 MENGHLREGREIFYDMLSRGQTPTVVTYTVLIHAHALNGRLDWAMAYFLEMQEKGVVPNV 622

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TYN L+N  CK  K D A      +  +G+ PN  T                       
Sbjct: 623 ITYNVLINGFCKVRKMDQACKFFIEMQEKGIFPNKYT----------------------- 659

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
                       Y ILIN  C  G    A+  + QM+ K  +PD  T+  +L  L K+  
Sbjct: 660 ------------YTILINENCNMGKWQEALRLYAQMLGKRIRPDSCTHGALLKKLDKDYK 707

Query: 413 LNEALQLLHLL 423
           + +A+Q +  L
Sbjct: 708 V-QAVQFIESL 717



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 68/253 (26%), Positives = 126/253 (49%)

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           +LV   ++     P+    N +L  L  +       ++  +M E    PTV TYN +++ 
Sbjct: 187 LLVFEKMMRNRFLPDVKNCNRILKILRDKNLLVKALEVYRMMGEYGIRPTVTTYNTMLHS 246

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
            CK G V RA++   +M  + C P  VT+N ++  L K+G L +A  L+  +  +     
Sbjct: 247 FCKGGEVQRALDLVPKMQERGCYPSEVTFNVLINGLSKKGELQQAKGLIQEMAKAGLRVS 306

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
             TYN LI G  KKG + +A+ L+ +M+  G+SP   +H T+++GFC+  ++ +A   L 
Sbjct: 307 PYTYNPLICGYCKKGLLVEALALWEEMVTRGVSPTVASHNTIMYGFCKEGKMSDARQQLS 366

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           ++ K+       +Y  +I+G C+   +  A  +L+ +       +   ++T++  +   G
Sbjct: 367 DMLKKNLMPDIISYNTLIYGFCRLGNIGEAFILLDELRFRNLSFNIVTYNTLIDGLCRLG 426

Query: 552 MTEEAYKLWQKLI 564
             E A KL + +I
Sbjct: 427 DLETALKLKEDMI 439


>gi|255558280|ref|XP_002520167.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540659|gb|EEF42222.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 604

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 151/558 (27%), Positives = 269/558 (48%), Gaps = 15/558 (2%)

Query: 26  QVSLQHGVVNNHRTQFYSQLRDLG----AGR-NVSLKC----RGLPGNVCIDRVNEVDQD 76
           QV ++ G++N  R +F+ +L + G    AG  N+ L C    R + G V +   +E  Q 
Sbjct: 47  QVLVEAGLLNEAR-KFFDKLLNYGVALSAGSCNLYLTCLSSKRDMLGMV-LKVFSEFPQL 104

Query: 77  E--WSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLT 134
              W++ES+ + +N   R   I +  H        G     D  +   I+  +C  G+L 
Sbjct: 105 GVCWNTESYNILMNSLFRLGKIREAHHLLMRMEFKGCI--PDVVSYTTIIDGYCHVGELQ 162

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
              +L+  M  +   P+ +   ++I  L +  ++ +  KVL+ M+  G  PD + Y  ++
Sbjct: 163 KVVQLVKEMQLKGLKPNLYTYSSIILLLCKSGKVVEGEKVLREMMKRGVFPDHVIYTTLI 222

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            G CK G  ++A  L  EM      PD I ++ ++  +  +GK  +A   + + ++KG  
Sbjct: 223 DGFCKLGNTQAAYKLFSEMEAREIVPDSIAFSALICGLSGSGKVVEADKLFNEMIKKGFE 282

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P  +TYT LI+  CK   + +A  + + M   G +P++VTY +L +  CK G+ D A  +
Sbjct: 283 PDEVTYTALIDGYCKLGEMKKAFFLHNQMVQIGLTPNVVTYTALADGLCKSGELDTANEL 342

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           ++ +  +G++ N  TYNT+++ L   G      K+++ M EA   P   TY  L++   K
Sbjct: 343 LHEMCRKGLQLNISTYNTIVNGLCKAGNILQAVKLMEEMKEAGLHPDTITYTTLMDAYYK 402

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G + +A     +M+ +  QP +VT+N ++  LC  G L +  +LL  +      P   T
Sbjct: 403 TGEMVKARELLREMLDRGLQPTVVTFNVLMNGLCMSGKLEDGERLLKWMLEKGIMPNAAT 462

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           YN+++     +  M  +  +Y  M   G+ PD  T+  LI G C+A  ++EA  L KE+ 
Sbjct: 463 YNSIMKQYCIRNNMRISTEIYRGMCAQGVVPDSNTYNILIKGHCKARNMKEAWFLHKEMV 522

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           ++   +  S+Y  +I G  K KK+  A Q+ E M          +++  V    ++G  E
Sbjct: 523 EKRFNLTASSYNALIKGFFKRKKLLEARQLFEEMRREGLVASAEIYNLFVDMNYEEGNME 582

Query: 555 EAYKLWQKLIEWKVFEKG 572
              +L  + IE  + +K 
Sbjct: 583 TTLELCDEAIEKCLLDKA 600


>gi|357167837|ref|XP_003581356.1| PREDICTED: pentatricopeptide repeat-containing protein At2g15630,
           mitochondrial-like [Brachypodium distachyon]
          Length = 524

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 122/396 (30%), Positives = 204/396 (51%), Gaps = 6/396 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L++ C+ GK   A +L+  M   N +        +I G     R++   ++++ M
Sbjct: 118 TFNIMLRHLCTAGKPVRALELLRQMPSPNAVT----YNTVIAGFCARGRVQAGIEIMREM 173

Query: 179 VMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNG 236
              GG+ PD  TY  ++ G CK G++  A  + DEM   G  EP+ + YN ++    D G
Sbjct: 174 RERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQG 233

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
             + A+ +  + + +G    + TY + +  +  +   A A  ++++M  +G +PD  TYN
Sbjct: 234 NLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTYN 293

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L+N  CK+GK   A+ +   ++ +G+    +TY +L+H+L  +G     D++ +     
Sbjct: 294 ILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVRR 353

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P +F YN LIN  C  G +DRA     +M  K   PD VTYNT++  LC  G L+EA
Sbjct: 354 GIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDEA 413

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             L+  +      P L++YNTLI G + KG ++ A+ +  +MM  G +P  +T+  +I G
Sbjct: 414 RGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIKG 473

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            C   Q  +A DL+KE+   G    +S Y  +I GL
Sbjct: 474 LCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGL 509



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 123/411 (29%), Positives = 207/411 (50%), Gaps = 14/411 (3%)

Query: 83  HVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDI 142
           H+    K +R L + ++   P            +  T N ++  FC+RG++    +++  
Sbjct: 125 HLCTAGKPVRALELLRQMPSP------------NAVTYNTVIAGFCARGRVQAGIEIMRE 172

Query: 143 MARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKR 200
           M  R  I PD +    +I G  ++ ++E A+KV   M+  G V P+ + YN ++GG C +
Sbjct: 173 MRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCDQ 232

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G +  A+    EM   G    V TYN  + T+F  G+  +A    ++   KG  P   TY
Sbjct: 233 GNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFTY 292

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            ILI   CK+    +A+++ + M  +G    +VTY SL++    +G   +   + N+ + 
Sbjct: 293 NILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAVR 352

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           RG+ P+   YN L++S  + G  D   +I+  M +   +P   TYN L+ GLC  G +D 
Sbjct: 353 RGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLDE 412

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A     +M  +  QPD+V+YNT++     +G + +A+++   + G   +P L+TYN +I 
Sbjct: 413 ARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMIK 472

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           GL   G    A  L  +M+ NGI+PDD T+ +LI G    D+   A D +K
Sbjct: 473 GLCLNGQGGDAEDLVKEMVGNGITPDDSTYISLIEGLTTEDERLAAGDDVK 523



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/380 (30%), Positives = 196/380 (51%), Gaps = 6/380 (1%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T+N+M+  LC  G+   A+ LL +M      P+ +TYNT++      G+ +  I   +
Sbjct: 116 TTTFNIMLRHLCTAGKPVRALELLRQMP----SPNAVTYNTVIAGFCARGRVQAGIEIMR 171

Query: 247 D-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCK 304
           + + R G  P   TY  +I   CK   +  A +V D+M  EG   P+ V YN+L+   C 
Sbjct: 172 EMRERGGIAPDKYTYATVISGWCKVGKVEDATKVFDEMLTEGKVEPNAVMYNALIGGYCD 231

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           QG  + A+     ++ RG+     TYN  +H+L   G       +++ M E   +P  FT
Sbjct: 232 QGNLEVALRYRGEMVDRGVSMTVATYNLFVHTLFMEGRAAEAHALVEEMGEKGLAPDAFT 291

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YNILING CK G   +A+  F  MV K  +  +VTY +++ AL  +GM+ E  +L +   
Sbjct: 292 YNILINGYCKEGKEKKAMKMFEVMVGKGIRATVVTYTSLIHALSMKGMVQETDRLFNDAV 351

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P L  YN LI+     G M++A  + G+M +  I+PDD+T+ TL+ G C   +++
Sbjct: 352 RRGIRPDLFMYNALINSHCTGGDMDRAFEIMGEMEKKRITPDDVTYNTLMRGLCLLGRLD 411

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  L++E+ KRG +    +Y  +I G      +  A++V + M+   + P    ++ ++
Sbjct: 412 EARGLIEEMTKRGIQPDLVSYNTLISGYSMKGDIKDAVKVRDEMMGKGFNPTLLTYNAMI 471

Query: 545 KKVADDGMTEEAYKLWQKLI 564
           K +  +G   +A  L ++++
Sbjct: 472 KGLCLNGQGGDAEDLVKEMV 491



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 104/377 (27%), Positives = 189/377 (50%), Gaps = 7/377 (1%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           P+ +TYN ++ G C RG++++ I ++ EM    G  PD  TY T++      GK + A  
Sbjct: 145 PNAVTYNTVIAGFCARGRVQAGIEIMREMRERGGIAPDKYTYATVISGWCKVGKVEDATK 204

Query: 244 FWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            + + L +G   P  + Y  LI   C Q  +  A+    +M   G S  + TYN  V+  
Sbjct: 205 VFDEMLTEGKVEPNAVMYNALIGGYCDQGNLEVALRYRGEMVDRGVSMTVATYNLFVHTL 264

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
             +G+  +A  ++  +  +G+ P++ TYN L++     G      K+ ++M       TV
Sbjct: 265 FMEGRAAEAHALVEEMGEKGLAPDAFTYNILINGYCKEGKEKKAMKMFEVMVGKGIRATV 324

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY  LI+ L   G+V      FN  V +  +PD+  YN ++ + C  G ++ A +++  
Sbjct: 325 VTYTSLIHALSMKGMVQETDRLFNDAVRRGIRPDLFMYNALINSHCTGGDMDRAFEIMGE 384

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P  +TYNTL+ GL   G +++A  L  +M + GI PD +++ TLI G+     
Sbjct: 385 MEKKRITPDDVTYNTLMRGLCLLGRLDEARGLIEEMTKRGIQPDLVSYNTLISGYSMKGD 444

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +++AV +  E+  +G       Y  +I GLC + +   A  +++ M+ +   PDD+ + +
Sbjct: 445 IKDAVKVRDEMMGKGFNPTLLTYNAMIKGLCLNGQGGDAEDLVKEMVGNGITPDDSTYIS 504

Query: 543 IVKKVADDGMTEEAYKL 559
           ++     +G+T E  +L
Sbjct: 505 LI-----EGLTTEDERL 516


>gi|357458533|ref|XP_003599547.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355488595|gb|AES69798.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 636

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 132/514 (25%), Positives = 255/514 (49%), Gaps = 6/514 (1%)

Query: 61  LPGNVCIDRVNEVDQDEWSSE--SHVLAVNKKLRGLTITKKSHDPSLPSSDGPF----VE 114
           +P N+ +D V         ++  S ++  NK L  L  +  +H P+  S         + 
Sbjct: 41  VPSNIDVDNVVSSFNHLLRTKPTSSIIEFNKILGSLVKSNNNHYPTAISLSRRLEFHGIT 100

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
            D  T N ++  +C   ++  A  ++  + +    PD      LI+GL    ++++A   
Sbjct: 101 PDIFTFNILINCYCHMAEMNFAFSMMAKILKMGYEPDTITFNTLIKGLCLNGKVKEALHF 160

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              ++  G   D  +Y  ++ GLCK G+ R+A+ +L ++     + +V+ YNTI+ ++  
Sbjct: 161 HDHVLALGFHLDQFSYGTLINGLCKIGETRTALQMLRKIDGKLVKINVVMYNTIIDSLCK 220

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +     A   +   + K   P ++T++ LI   C    +  A  +  +M ++  +PD  T
Sbjct: 221 HKLVIDAYELYSQMIAKKISPDVVTFSALIYGFCIVGQLEEAFGLFREMVLKNINPDYYT 280

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +N LV+  CK+G    A  ++  ++  G+ PN +TY++L+         +    +L+ ++
Sbjct: 281 FNILVDALCKEGNLKGAKNMLVVMMKEGVMPNVVTYSSLMDGYCLVNQVNKAKHVLNTIS 340

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +   +P   +Y  +ING CK  +VD A++ FN M  K   PD VTYN+++  LCK G ++
Sbjct: 341 QMGAAPNAHSYCTMINGFCKIKMVDEALSLFNDMQFKGIAPDKVTYNSLIDGLCKSGRIS 400

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A +L+  ++ +     + TYN LID L K   +++A+ L  ++ + GI PD  T   LI
Sbjct: 401 YAWELVDEMHDNGQPANIFTYNCLIDALCKNHHVDQAIALVKKIKDQGIQPDMYTFNILI 460

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
           +G C+  +++ A D+ +++  +G  +    Y ++++GLCK    D A  +L  M  +   
Sbjct: 461 YGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNIMVNGLCKEGLFDEAEALLSKMDDNGII 520

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           PD   + T+++ +      E+A KL +++I   V
Sbjct: 521 PDAVTYETLIQALFHKDENEKAEKLLREMIARDV 554



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/433 (27%), Positives = 206/433 (47%), Gaps = 37/433 (8%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           E D  T N +++  C  GK+ +A    D ++A    +  F +   LI GL +I     A 
Sbjct: 135 EPDTITFNTLIKGLCLNGKVKEALHFHDHVLALGFHLDQFSYG-TLINGLCKIGETRTAL 193

Query: 173 KVLQI-----------------------------------MVMSGGVPDTITYNMMVGGL 197
           ++L+                                    M+     PD +T++ ++ G 
Sbjct: 194 QMLRKIDGKLVKINVVMYNTIIDSLCKHKLVIDAYELYSQMIAKKISPDVVTFSALIYGF 253

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C  GQ+  A  L  EM +    PD  T+N ++  +   G  K A       +++G  P +
Sbjct: 254 CIVGQLEEAFGLFREMVLKNINPDYYTFNILVDALCKEGNLKGAKNMLVVMMKEGVMPNV 313

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +TY+ L++  C    + +A  VL+ ++  G +P+  +Y +++N  CK    D+A+ + N+
Sbjct: 314 VTYSSLMDGYCLVNQVNKAKHVLNTISQMGAAPNAHSYCTMINGFCKIKMVDEALSLFND 373

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +  +G+ P+ +TYN+L+  L   G      +++D M++      +FTYN LI+ LCK   
Sbjct: 374 MQFKGIAPDKVTYNSLIDGLCKSGRISYAWELVDEMHDNGQPANIFTYNCLIDALCKNHH 433

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           VD+AI    ++  +  QPD+ T+N ++  LCK G L  A  +   L     S    TYN 
Sbjct: 434 VDQAIALVKKIKDQGIQPDMYTFNILIYGLCKVGRLKNAQDVFQDLLSKGYSVNAWTYNI 493

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +++GL K+G  ++A  L  +M +NGI PD +T+ TLI      D+ E+A  LL+E+  R 
Sbjct: 494 MVNGLCKEGLFDEAEALLSKMDDNGIIPDAVTYETLIQALFHKDENEKAEKLLREMIARD 553

Query: 498 NKMRNSAYRLVIH 510
                    +V+H
Sbjct: 554 VVYALEGLEMVLH 566


>gi|357475985|ref|XP_003608278.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359684|gb|ABD32353.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355509333|gb|AES90475.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 870

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 139/514 (27%), Positives = 248/514 (48%), Gaps = 65/514 (12%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++ +FC +    +A KL++ M  +  +PD     + I  L R  ++ +AS++ + M M
Sbjct: 223 NTLVSSFCKQDMNDEAEKLVERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQM 282

Query: 181 SGGV----PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            G +    P+ +T+N+M+ G C+ G +  A +L++ M   G    + +YNT L  +  NG
Sbjct: 283 DGELGLPKPNVVTFNLMLKGFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNG 342

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K  +      + +  G  P + +Y I+++ +C+   +  A  ++D M   G  PD VTY 
Sbjct: 343 KLLEGRSVLDEMVENGIEPNIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYT 402

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L++  C +GK  +A  ++N ++ +G  PN+ T NTLL+SL   G     +++L  MNE 
Sbjct: 403 TLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEK 462

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQM-----------------------VSKNC 393
           S+     T NI++NGLC+ G +++A    ++M                       VS N 
Sbjct: 463 SYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNV 522

Query: 394 QPDIVTYNTVLGALCKEGMLNE-----------------------------------ALQ 418
            PD++TY T++  LCK G L E                                   AL+
Sbjct: 523 -PDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALR 581

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +  + CS  L TYN+LI GL  KG + +   L  +M E GI PD  T+  +I   C
Sbjct: 582 VLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLC 641

Query: 479 RADQVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
              + ++A  LL E+  +G    N S+++++I   CKS    +A ++ ++ +S      +
Sbjct: 642 EGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSV-CGHKE 700

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
            ++S +  ++   G   +A +L++  +E  +  K
Sbjct: 701 ALYSLMFNELLAGGKLSDAKELFEASLERSLLSK 734



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 212/432 (49%), Gaps = 31/432 (7%)

Query: 160 RGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE 219
           R  ++ +R    + +   M+ +G  P+T T+N+++  LC+   +  A  L D+MS  GC+
Sbjct: 124 RSSLQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQ 183

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P+  T   ++R     G+ KQA+ F   ++  G     + Y  L+   CKQ     A ++
Sbjct: 184 PNKFTVGILVRGFCRAGRTKQALEFVDGKM--GGNVNRVVYNTLVSSFCKQDMNDEAEKL 241

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM----EPNSITYNTLLH 335
           ++ M  +G  PD+VT+NS ++  C+ GK  +A  +  ++   G     +PN +T+N +L 
Sbjct: 242 VERMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLK 301

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                G  +    +++ M +  +  ++ +YN  + GL + G +    +  ++MV    +P
Sbjct: 302 GFCQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEP 361

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +I +YN V+  LC+  M+ +A +L+ L+  +   P  +TY TL+ G   KG + +A  + 
Sbjct: 362 NIYSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAIL 421

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M+  G  P+  T  TL+    +  +  EA ++L+++ ++  ++      +V++GLC++
Sbjct: 422 NEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRN 481

Query: 516 KKVDMAIQVLELMIS----------------------SRYKPDDTVFSTIVKKVADDGMT 553
            +++ A +V+  M +                      S   PD   ++T++  +   G  
Sbjct: 482 GELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKL 541

Query: 554 EEAYKLWQKLIE 565
           EEA K   K IE
Sbjct: 542 EEAKK---KFIE 550



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 123/475 (25%), Positives = 220/475 (46%), Gaps = 40/475 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C    + DA +L+D+M      PD      L+ G     ++ +A  +L  M+ 
Sbjct: 367 NIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVTYTTLLHGYCSKGKVFEAKAILNEMIR 426

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+T T N ++  L K G+   A  +L +M+    + D +T N ++  +  NG+ ++
Sbjct: 427 KGCHPNTYTCNTLLNSLWKEGRKSEAEEMLQKMNEKSYQLDTVTCNIVVNGLCRNGELEK 486

Query: 241 A----IGFWKD---QLRKGCP---------------PYLITYTILIEQVCKQCGIARAIE 278
           A       W D    L K  P               P +ITYT LI  +CK   +  A +
Sbjct: 487 ASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVPDVITYTTLINGLCKVGKLEEAKK 546

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
              +M  +   PD VTY++ V   CKQGK   A+ V+ ++   G      TYN+L+  LG
Sbjct: 547 KFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDMERNGCSKTLQTYNSLILGLG 606

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDI 397
           S+G    +  ++D M E    P + TYN +IN LC+ G    A +  ++M+ K    P++
Sbjct: 607 SKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTKDATSLLHEMLDKGVVSPNV 666

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            ++  ++ A CK G    A +L  +   S C      Y+ + + L   G +  A  L+  
Sbjct: 667 SSFKILIKAFCKSGDFKVACELFDVA-LSVCGHKEALYSLMFNELLAGGKLSDAKELFEA 725

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK--- 514
            +E  +   +  +  LI   C+  ++++A  LL+++  +G    +S++  VI GL K   
Sbjct: 726 SLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGYCFDHSSFIPVIDGLSKRGN 785

Query: 515 SKKVDMAIQVLELMISSR-----YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++ D   +++EL +  +     Y+  +++F    +K+  DG ++     WQ +I
Sbjct: 786 KQQADELGRIMELALEDKTSDRTYRNGNSIFR---RKLHKDGGSD-----WQDII 832



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 116/426 (27%), Positives = 197/426 (46%), Gaps = 32/426 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L  +CS+GK+ +A  +++ M R+   P+ + C  L+  L +  R  +A ++L
Sbjct: 397 DTVTYTTLLHGYCSKGKVFEAKAILNEMIRKGCHPNTYTCNTLLNSLWKEGRKSEAEEML 456

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE---------------- 219
           Q M       DT+T N++V GLC+ G++  A  ++ EM   G                  
Sbjct: 457 QKMNEKSYQLDTVTCNIVVNGLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIH 516

Query: 220 ------PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
                 PDVITY T++  +   GK ++A   + + + K   P  +TY   +   CKQ  I
Sbjct: 517 NVSTNVPDVITYTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKI 576

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
           + A+ VL DM   GCS  + TYNSL+     +G+  +   +++ +  RG+ P+  TYN +
Sbjct: 577 SSALRVLKDMERNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNM 636

Query: 334 LHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           ++ L   G   DA   + +++++   SP V ++ ILI   CK G    A   F+  +S  
Sbjct: 637 INCLCEGGKTKDATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELFDVALSV- 695

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C      Y+ +   L   G L++A +L       S       Y  LID L K G ++ A 
Sbjct: 696 CGHKEALYSLMFNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAH 755

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCR------ADQVEEAVDLLKE--IGKRGNKMRNSA 504
            L  ++++ G   D  +   +I G  +      AD++   ++L  E     R  +  NS 
Sbjct: 756 GLLQKLIDKGYCFDHSSFIPVIDGLSKRGNKQQADELGRIMELALEDKTSDRTYRNGNSI 815

Query: 505 YRLVIH 510
           +R  +H
Sbjct: 816 FRRKLH 821



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/277 (24%), Positives = 136/277 (49%), Gaps = 6/277 (2%)

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
           S +Q +      +  +++  G+ P + T+N L+ SL      D   ++ D M+E    P 
Sbjct: 126 SLQQNRPHYVTSLYTDMIQTGVNPETYTFNLLIQSLCESNALDHARELFDKMSEKGCQPN 185

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            FT  IL+ G C+ G   +A+   +  +  N   + V YNT++ + CK+ M +EA +L+ 
Sbjct: 186 KFTVGILVRGFCRAGRTKQALEFVDGKMGGNV--NRVVYNTLVSSFCKQDMNDEAEKLVE 243

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG----ISPDDITHRTLIWGF 477
            +      P ++T+N+ I  L + G + +A  ++  M  +G      P+ +T   ++ GF
Sbjct: 244 RMTEKGLLPDVVTFNSRISALCRAGKVFEASRIFRDMQMDGELGLPKPNVVTFNLMLKGF 303

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+   +EEA  L++ + K GN +   +Y   + GL ++ K+     VL+ M+ +  +P+ 
Sbjct: 304 CQEGMMEEARSLVETMKKGGNFVSLESYNTWLLGLLRNGKLLEGRSVLDEMVENGIEPNI 363

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             ++ ++  +  + M  +A +L   ++   V+    T
Sbjct: 364 YSYNIVMDGLCRNHMMLDARRLMDLMVSNGVYPDTVT 400



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 83/318 (26%), Positives = 137/318 (43%), Gaps = 11/318 (3%)

Query: 60  GLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKT 119
           GL  N  +++ +EV  + W+  ++ L     + GL  +  +   ++P         D  T
Sbjct: 477 GLCRNGELEKASEVVSEMWTDGTNSLGKENPVAGLVNSIHNVSTNVP---------DVIT 527

Query: 120 NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
              ++   C  GKL +A K    M  +N  PD       +    +  +I  A +VL+ M 
Sbjct: 528 YTTLINGLCKVGKLEEAKKKFIEMMAKNLHPDSVTYDTFVLNFCKQGKISSALRVLKDME 587

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            +G      TYN ++ GL  +GQI     L+DEM   G  PD+ TYN ++  + + GK K
Sbjct: 588 RNGCSKTLQTYNSLILGLGSKGQIFEMYGLMDEMRERGIHPDICTYNNMINCLCEGGKTK 647

Query: 240 QAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            A     + L KG   P + ++ ILI+  CK      A E+  D+A+  C      Y+ +
Sbjct: 648 DATSLLHEMLDKGVVSPNVSSFKILIKAFCKSGDFKVACELF-DVALSVCGHKEALYSLM 706

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            N     GK  DA  +    L R +   +  Y  L+  L   G  D    +L  + +  +
Sbjct: 707 FNELLAGGKLSDAKELFEASLERSLLSKNFMYEDLIDKLCKDGRLDDAHGLLQKLIDKGY 766

Query: 359 SPTVFTYNILINGLCKYG 376
                ++  +I+GL K G
Sbjct: 767 CFDHSSFIPVIDGLSKRG 784


>gi|302806388|ref|XP_002984944.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
 gi|300147530|gb|EFJ14194.1| hypothetical protein SELMODRAFT_121294 [Selaginella moellendorffii]
          Length = 468

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 114/408 (27%), Positives = 213/408 (52%), Gaps = 4/408 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +++ L +   + +A +V + M     VP  +TYN+++   C  G+   A+ L   M    
Sbjct: 16  VVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSMKREK 75

Query: 218 -CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
             EPD  TYNT++  +  +G  + A     +   K     + TY+ +I+ + K+     +
Sbjct: 76  RVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEES 135

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            +VL++M   GC+PD+  +N ++    +    + A  V  +++  G +P++++Y+ L+H 
Sbjct: 136 YKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHG 195

Query: 337 LGSRGCWDAVDKILD--IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           L   G  D   KIL    M  A + P V T++ LI+GLC+ G +++A+  F  M+   C+
Sbjct: 196 LAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCK 255

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+  TY T++  LC+   + +A +L   +  +   P  + YN+LI G  K+G M++A  L
Sbjct: 256 PNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKL 315

Query: 455 YGQMMEN-GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           Y +M    G+ P  +T  TLI GFC+  ++  A +L+ E+G +G       YR++I GL 
Sbjct: 316 YREMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLS 375

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           ++ K+D A++V + M   ++  D     + V  +   G  ++AY +++
Sbjct: 376 RATKLDEALEVYKQMREKKFLLDPVSCVSFVGGLCKTGNIDQAYAVFE 423



 Score =  177 bits (449), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 110/412 (26%), Positives = 202/412 (49%), Gaps = 4/412 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N ++ + C+ G+   A  L   M R  ++ PD      LI GL      E A K+L  
Sbjct: 47  TYNVLINSRCNAGEFGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSE 106

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M       +  TY+ ++  L K  +   +  +L+EM  +GC PDV  +N +++    +  
Sbjct: 107 MRDKNIAANVFTYSSIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNN 166

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE--GCSPDIVTY 295
            ++A   ++  +  G  P  ++Y ILI  + K   +  ++++L +MA+   G  P+++T+
Sbjct: 167 MEKAREVYQHMVESGYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITF 226

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  C+ G+ + A+ V  ++L  G +PN  TY TL+  L          ++ + M +
Sbjct: 227 STLIHGLCRTGELEKALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQ 286

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS-KNCQPDIVTYNTVLGALCKEGMLN 414
           A   P    YN LI G CK G +D A   + +M      QP IVT+NT++   CK G L 
Sbjct: 287 ACIPPDAVAYNSLIAGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLIDGFCKLGKLG 346

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A +L+  +     +    TY  LI GL++   +++A+ +Y QM E     D ++  + +
Sbjct: 347 RANELVAEMGTKGLAADTCTYRILIAGLSRATKLDEALEVYKQMREKKFLLDPVSCVSFV 406

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            G C+   +++A  + +   K G       +R++   L K  +V+ A +++E
Sbjct: 407 GGLCKTGNIDQAYAVFEATRKSGAVPNPETFRILSESLIKLGRVEDAQKLME 458



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 105/394 (26%), Positives = 190/394 (48%), Gaps = 17/394 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N ++   CS G    A KL+  M  +N   +     ++I+ L++  + E++ 
Sbjct: 77  VEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAKPEESY 136

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KVL+ M+ +G  PD   +N ++ G  +   +  A  +   M  SG +PD ++Y+ ++  +
Sbjct: 137 KVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHILIHGL 196

Query: 233 FDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
              GK  +++    +   +  G  P +IT++ LI  +C+   + +A+EV   M   GC P
Sbjct: 197 AKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLEAGCKP 256

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           +  TY +L+   C+  K   A  +   +    + P+++ YN+L+     RG  D  +K+ 
Sbjct: 257 NKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDEAEKLY 316

Query: 351 DIMN-EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
             M+  A   PT+ T+N LI+G CK G + RA     +M +K    D  TY  ++  L +
Sbjct: 317 REMSGGAGLQPTIVTFNTLIDGFCKLGKLGRANELVAEMGTKGLAADTCTYRILIAGLSR 376

Query: 410 EGMLNEALQLLH-------LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
              L+EAL++         LL+  SC        + + GL K G +++A  ++    ++G
Sbjct: 377 ATKLDEALEVYKQMREKKFLLDPVSCV-------SFVGGLCKTGNIDQAYAVFEATRKSG 429

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
             P+  T R L     +  +VE+A  L++    R
Sbjct: 430 AVPNPETFRILSESLIKLGRVEDAQKLMEPAKAR 463



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 88/308 (28%), Positives = 165/308 (53%), Gaps = 3/308 (0%)

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
            Y  +++ + K   +A+A+EV + M  E C P +VTYN L+N  C  G++  A+ +  ++
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 319 -LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
              + +EP+  TYNTL+  L S G  +   K+L  M + + +  VFTY+ +I  L K   
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            + +     +M++  C PD+  +N V+    +   + +A ++   +  S   P  ++Y+ 
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 438 LIDGLAKKGCMEKAMVLYGQMM--ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           LI GLAK G +++++ +  +M     G  P+ IT  TLI G CR  ++E+A+++   + +
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G K     Y  +I GLC+++KV  A ++ E M  +   PD   +++++      G  +E
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLIAGYCKRGSMDE 311

Query: 556 AYKLWQKL 563
           A KL++++
Sbjct: 312 AEKLYREM 319



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 95/336 (28%), Positives = 178/336 (52%), Gaps = 4/336 (1%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           MS + C      Y+ +++++   G   QA+  ++    + C P L+TY +LI   C    
Sbjct: 1   MSKAKCAIGGDAYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGE 60

Query: 273 IARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
             +A+++   M  E    PD  TYN+L++  C  G  + A  +++ +  + +  N  TY+
Sbjct: 61  FGKALDLFQSMKREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYS 120

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           +++ SL      +   K+L+ M  A  +P VF +N ++ G  +   +++A   +  MV  
Sbjct: 121 SIIKSLVKEAKPEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVES 180

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLH--LLNGSSCSPCLITYNTLIDGLAKKGCME 449
             +PD V+Y+ ++  L K G L+E+L++L    +  +   P +IT++TLI GL + G +E
Sbjct: 181 GYKPDNVSYHILIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELE 240

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KA+ ++G M+E G  P+  T+ TLI G CRA++V +A +L +++ +        AY  +I
Sbjct: 241 KALEVFGSMLEAGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQACIPPDAVAYNSLI 300

Query: 510 HGLCKSKKVDMAIQVL-ELMISSRYKPDDTVFSTIV 544
            G CK   +D A ++  E+   +  +P    F+T++
Sbjct: 301 AGYCKRGSMDEAEKLYREMSGGAGLQPTIVTFNTLI 336



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 74/275 (26%), Positives = 148/275 (53%), Gaps = 3/275 (1%)

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW-DAVDKILDI 352
            Y+ +V    K G    A+ V   + S    P+ +TYN L++S  + G +  A+D    +
Sbjct: 12  AYDFVVQSLAKAGMLAQALEVFETMKSESCVPSLVTYNVLINSRCNAGEFGKALDLFQSM 71

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
             E    P  +TYN LI+GLC  G  + A    ++M  KN   ++ TY++++ +L KE  
Sbjct: 72  KREKRVEPDRWTYNTLISGLCSSGNTEGARKLLSEMRDKNIAANVFTYSSIIKSLVKEAK 131

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             E+ ++L  +  + C+P +  +N ++ G A+   MEKA  +Y  M+E+G  PD++++  
Sbjct: 132 PEESYKVLEEMMAAGCNPDVFAFNGVMQGFARSNNMEKAREVYQHMVESGYKPDNVSYHI 191

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMIS 530
           LI G  +  +++E++ +L E+  R      +   +  +IHGLC++ +++ A++V   M+ 
Sbjct: 192 LIHGLAKIGKLDESLKILSEMAMRAAGYVPNVITFSTLIHGLCRTGELEKALEVFGSMLE 251

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +  KP+   ++T++  +       +A +L++K+ +
Sbjct: 252 AGCKPNKYTYTTLIAGLCRAEKVIQARELFEKMTQ 286


>gi|357130063|ref|XP_003566676.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 822

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 133/489 (27%), Positives = 229/489 (46%), Gaps = 38/489 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ--IPDFHFCINLIRGLIRIDRIEK 170
           VE D  + + +L++ C   +   A  L+  M +++    P+      +I G  R   + K
Sbjct: 186 VEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSK 245

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  +   M+  G VPD +TY+  +  LCK   +  A  +L +M  +G EPD +TYN ++ 
Sbjct: 246 ACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMISNGFEPDKVTYNCMIH 305

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                G++K+  G +++  R+G  P + T    +  +CK      A E  D MA +G  P
Sbjct: 306 GYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKP 365

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+VTY+ L++    +G   D + + N++   G+  +   YN L+ + G RG  D    I 
Sbjct: 366 DLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIF 425

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY---------- 400
             M E    P  +TY  +I    + G +  A++ FNQM++   +PD + Y          
Sbjct: 426 TQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMH 485

Query: 401 --------------------------NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
                                     N+++ +LCKEG + EA  +  L+      P +IT
Sbjct: 486 GNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDIFDLVIHIGERPDVIT 545

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           +N+LIDG    G MEKA  +   M+  GI PD +T+  L+ G+CR  ++++ + L +E+ 
Sbjct: 546 FNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCRNGRIDDGLILFREML 605

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
            +G K     Y +++HGL    +   A ++   MI S    D +    I+  +  +   +
Sbjct: 606 SKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDD 665

Query: 555 EAYKLWQKL 563
           EA  L++KL
Sbjct: 666 EAIALFKKL 674



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/384 (29%), Positives = 201/384 (52%), Gaps = 4/384 (1%)

Query: 186 DTITYNMMVGGLCKRGQIRSAI-ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           D I  N+++  LC   +   A+  LL  M   G EPD I+Y+T+L+++ ++ + ++A+  
Sbjct: 153 DVIVANILLKCLCHAKRSDDAVNVLLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDL 212

Query: 245 WKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               ++K  GC P +++Y  +I    ++  +++A  +  +M  +G  PD+VTY+S ++  
Sbjct: 213 LHTMVKKSGGCSPNVVSYNTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDAL 272

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK    D A LV+  ++S G EP+ +TYN ++H     G W     +   M      P +
Sbjct: 273 CKARAMDKAELVLRQMISNGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDI 332

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FT N  ++ LCK+G    A   F+ M +K  +PD+VTY+ +L     EG + + L L + 
Sbjct: 333 FTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNS 392

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           + G+        YN LID   K+G M++AM+++ QM E G+ PD  T+ T+I  F R  +
Sbjct: 393 MEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGR 452

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL-ELMISSRYKPDDTVFS 541
           + +A+D   ++   G K     Y  +I G C    +  A +++ E+M     +P+   F+
Sbjct: 453 LADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFN 512

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
           +I+  +  +G   EA  ++  +I 
Sbjct: 513 SIINSLCKEGRVVEAQDIFDLVIH 536



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 226/479 (47%), Gaps = 36/479 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  F   G+++ A  L   M ++  +PD     + I  L +   ++KA  VL+ M+ 
Sbjct: 231 NTVIHGFFREGEVSKACNLFHEMMQQGVVPDVVTYSSYIDALCKARAMDKAELVLRQMIS 290

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PD +TYN M+ G    GQ +    +  EM+  G  PD+ T N+ + ++  +GK K+
Sbjct: 291 NGFEPDKVTYNCMIHGYSILGQWKETAGMFREMTRRGLMPDIFTCNSYMSSLCKHGKSKE 350

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A  F+     KG  P L+TY++L+     +  +   + + + M   G   D   YN L++
Sbjct: 351 AAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSMEGNGIVADHSVYNILID 410

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDK----------- 348
              K+G  D+A+L+   +  RG+ P++ TY T++ +    G   DA+DK           
Sbjct: 411 AYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRLADAMDKFNQMIAMGLKP 470

Query: 349 ------------------------ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
                                   I ++M+     P    +N +IN LCK G V  A + 
Sbjct: 471 DTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNSIINSLCKEGRVVEAQDI 530

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F+ ++    +PD++T+N+++      G + +A  +L  +      P ++TY+ L+DG  +
Sbjct: 531 FDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVGIEPDVVTYSALLDGYCR 590

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G ++  ++L+ +M+  G+ P  IT+  ++ G     +   A  +  E+ + G  M  S 
Sbjct: 591 NGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDIST 650

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             +++ GLC++   D AI + + + +   K +  + +T++  +      EEA +L+  +
Sbjct: 651 CGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAMYKVRKREEANELFDSI 709



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 204/446 (45%), Gaps = 1/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  + + C  GK  +A++  D MA +   PD      L+ G      +     +   M
Sbjct: 334 TCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPDLVTYSVLLHGYAAEGYVVDMLNLFNSM 393

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G V D   YN+++    KRG +  A+ +  +M   G  PD  TY T++      G+ 
Sbjct: 394 EGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMGRL 453

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS-PDIVTYNS 297
             A+  +   +  G  P  I Y  LI+  C    + +A E++ +M   G   P+ V +NS
Sbjct: 454 ADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFFNS 513

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++N  CK+G+  +A  + + ++  G  P+ IT+N+L+   G  G  +    +LD M    
Sbjct: 514 IINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMISVG 573

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TY+ L++G C+ G +D  +  F +M+SK  +P  +TY  +L  L  +G    A 
Sbjct: 574 IEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++ H +  S  +  + T   ++ GL +  C ++A+ L+ ++    +  +     T+I   
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMIDAM 693

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +  + EEA +L   I   G     S Y ++I  L K   V+ A  +  LM  S   P  
Sbjct: 694 YKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAPSS 753

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
            + + I++ + + G   +A     K+
Sbjct: 754 RLLNNIIRVLLEKGEISKAGNYLSKV 779



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/423 (26%), Positives = 202/423 (47%), Gaps = 1/423 (0%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S +G  +  D    N ++  +  RG + +A  +   M  R  +PD      +I    R+ 
Sbjct: 392 SMEGNGIVADHSVYNILIDAYGKRGMMDEAMLIFTQMQERGVMPDAWTYGTVIAAFSRMG 451

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC-EPDVITY 225
           R+  A      M+  G  PDTI YN ++ G C  G +  A  L+ EM   G   P+ + +
Sbjct: 452 RLADAMDKFNQMIAMGLKPDTIVYNSLIQGFCMHGNLVKAKELISEMMSRGIPRPNTVFF 511

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N+I+ ++   G+  +A   +   +  G  P +IT+  LI+       + +A  VLD M  
Sbjct: 512 NSIINSLCKEGRVVEAQDIFDLVIHIGERPDVITFNSLIDGYGLVGKMEKAFGVLDAMIS 571

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
            G  PD+VTY++L++  C+ G+ DD +++   +LS+G++P +ITY  +LH L + G    
Sbjct: 572 VGIEPDVVTYSALLDGYCRNGRIDDGLILFREMLSKGVKPTTITYGIILHGLFNDGRTVG 631

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             K+   M E+  +  + T  I++ GLC+    D AI  F ++ + N + +I   NT++ 
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIALFKKLGAMNVKFNIAIINTMID 691

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           A+ K     EA +L   ++ +   P   TY  +I  L K+G +E+A  ++  M ++G +P
Sbjct: 692 AMYKVRKREEANELFDSISATGLVPNASTYGVMITNLLKEGSVEEADNMFSLMEKSGCAP 751

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
                  +I       ++ +A + L ++  +   +  S   L++    +  K    I+ L
Sbjct: 752 SSRLLNNIIRVLLEKGEISKAGNYLSKVDGKTISLEASTASLMLSLFSRKGKYREQIKSL 811

Query: 526 ELM 528
             M
Sbjct: 812 PAM 814



 Score = 51.2 bits (121), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/142 (23%), Positives = 68/142 (47%), Gaps = 3/142 (2%)

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD- 488
           P + TYN L+D   +         L+G+ ++ G+  D I    L+   C A + ++AV+ 
Sbjct: 117 PTVCTYNILMDCCCRAHRPTVGFALFGRFLKTGLKTDVIVANILLKCLCHAKRSDDAVNV 176

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI--SSRYKPDDTVFSTIVKK 546
           LL  + + G +    +Y  V+  LC+  +   A+ +L  M+  S    P+   ++T++  
Sbjct: 177 LLHRMPELGVEPDTISYSTVLKSLCEDSRSQRALDLLHTMVKKSGGCSPNVVSYNTVIHG 236

Query: 547 VADDGMTEEAYKLWQKLIEWKV 568
              +G   +A  L+ ++++  V
Sbjct: 237 FFREGEVSKACNLFHEMMQQGV 258


>gi|224108788|ref|XP_002314968.1| predicted protein [Populus trichocarpa]
 gi|222864008|gb|EEF01139.1| predicted protein [Populus trichocarpa]
          Length = 662

 Score =  208 bits (530), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 230/453 (50%), Gaps = 6/453 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T N +L+  C   ++  A KL+  M+ +  IPD      ++  + R+ ++E+A 
Sbjct: 174 IELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEAR 233

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M +   VP    YN ++ G C+  ++     L +EM+V G +PDVITY+T++ T+
Sbjct: 234 EL--SMRIKSFVP---VYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTL 288

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            + G  + A+        +GC P + T+T L++       +  A+++ + M  EG  P+ 
Sbjct: 289 SEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNT 348

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V YN+L++  C  GK  +AV V   +   G+ PN  TY+TL+      G      +I + 
Sbjct: 349 VAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNK 408

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P V  Y  +++ LC+  + + A++    M + NC P+ +T+NT +  LC  G 
Sbjct: 409 MITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGK 468

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
              A+++L+ +    C+P + TYN ++DGL       +A+ + G++ E  I  + +T+ T
Sbjct: 469 TEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNT 528

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE-LMISS 531
           ++ GFC A   + A+ +  ++   G K  +  Y  VI+  CK  +V  AIQ+++ L    
Sbjct: 529 ILSGFCHAGMFKGALQIAGKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKG 588

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              PD   +++++  V +    +EA     K+I
Sbjct: 589 EGYPDVFTYTSLLWGVCNWIGVDEAVVHLDKMI 621



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 211/444 (47%), Gaps = 30/444 (6%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P      +++  L+  ++ +  + +   M   G   +  TYNM++  LCK  ++ +A  L
Sbjct: 141 PSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKL 200

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI------------------GF------- 244
           L EMS  GC PD ++Y T++ +M   GK ++A                   GF       
Sbjct: 201 LAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKME 260

Query: 245 -----WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
                + +   +G  P +ITY+ +I  + +   +  A+ VL  M + GCSP++ T+ SL+
Sbjct: 261 EVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLM 320

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
                 G+  +A+ + N ++  G EPN++ YNTL+H L S G       +   M      
Sbjct: 321 KGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVF 380

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   TY+ LI+G  K G +  A   +N+M++  C P++V Y  ++  LC+  M N AL L
Sbjct: 381 PNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHL 440

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           +  +   +C P  IT+NT I GL   G  E AM +  QM + G +P+  T+  ++ G   
Sbjct: 441 IENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFN 500

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A +  EA+ ++ EI +   K     Y  ++ G C +     A+Q+   ++    KPD   
Sbjct: 501 AKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGTKPDSIT 560

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           ++T++      G  + A +L  +L
Sbjct: 561 YNTVIYAYCKQGEVKTAIQLVDRL 584



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/393 (28%), Positives = 192/393 (48%), Gaps = 1/393 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC   K+ +  +L + MA     PD      +I  L  +  +E A  VL  M +
Sbjct: 247 NALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFL 306

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+  T+  ++ G    G++  A+ L + M   G EP+ + YNT++  +   GK  +
Sbjct: 307 RGCSPNVHTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVE 366

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +   R G  P   TY+ LI+   K   +  A E+ + M   GC P++V Y  +V+
Sbjct: 367 AVSVSQKMERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVD 426

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+   ++ A+ +I N+ +    PN+IT+NT +  L   G  +   K+L+ M +   +P
Sbjct: 427 VLCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAP 486

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN +++GL        A+    ++     + ++VTYNT+L   C  GM   ALQ+ 
Sbjct: 487 NVTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIA 546

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS-PDDITHRTLIWGFCR 479
             L      P  ITYNT+I    K+G ++ A+ L  ++ + G   PD  T+ +L+WG C 
Sbjct: 547 GKLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCN 606

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
              V+EAV  L ++   G     + +  ++ GL
Sbjct: 607 WIGVDEAVVHLDKMINEGICPNRATWNALVRGL 639



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 203/431 (47%), Gaps = 30/431 (6%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I+    +LQ+M + G   +   + +++    + G    A+     +   GC+P V  YN 
Sbjct: 89  IDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGEFGCKPSVKIYNH 148

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           +L  +    KF+   G + +  R G    + TY +L++ +CK   +  A ++L +M+ +G
Sbjct: 149 VLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDAARKLLAEMSYKG 208

Query: 288 CSPDIVTY------------------------------NSLVNFSCKQGKYDDAVLVINN 317
           C PD V+Y                              N+L+N  C++ K ++   + N 
Sbjct: 209 CIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGFCREHKMEEVFELFNE 268

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G++P+ ITY+T++++L   G  +    +L  M     SP V T+  L+ G    G 
Sbjct: 269 MAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNVHTFTSLMKGYFMGGR 328

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +  A++ +N+M+ +  +P+ V YNT++  LC  G + EA+ +   +  +   P   TY+T
Sbjct: 329 LCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKMERNGVFPNETTYST 388

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LIDG AK G +  A  ++ +M+ NG  P+ + +  ++   CR      A+ L++ +    
Sbjct: 389 LIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMFNHALHLIENMANGN 448

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  +   I GLC S K + A++VL  M      P+ T ++ ++  + +   T EA 
Sbjct: 449 CPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEVLDGLFNAKRTREAL 508

Query: 558 KLWQKLIEWKV 568
           ++  ++ E ++
Sbjct: 509 QIVGEIEEMEI 519



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 86/328 (26%), Positives = 155/328 (47%), Gaps = 1/328 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++ +   G+L +A  L + M +    P+      LI GL    ++ +A  V Q M
Sbjct: 315 TFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQKM 374

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  P+  TY+ ++ G  K G +  A  + ++M  +GC P+V+ Y  ++  +  N  F
Sbjct: 375 ERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMITNGCLPNVVVYTCMVDVLCRNSMF 434

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+   ++     CPP  IT+   I+ +C       A++VL+ M   GC+P++ TYN +
Sbjct: 435 NHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPNVTTYNEV 494

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++      +  +A+ ++  +    ++ N +TYNT+L      G +    +I   +     
Sbjct: 495 LDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAGKLLVGGT 554

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEAL 417
            P   TYN +I   CK G V  AI   +++  K    PD+ TY ++L  +C    ++EA+
Sbjct: 555 KPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNWIGVDEAV 614

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKK 445
             L  +      P   T+N L+ GL  K
Sbjct: 615 VHLDKMINEGICPNRATWNALVRGLFSK 642



 Score =  129 bits (324), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 93/337 (27%), Positives = 163/337 (48%), Gaps = 30/337 (8%)

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +TYT +I+++  +  I     +L  M +EG S +   +  ++N   + G  + A+     
Sbjct: 74  LTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYR 133

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G +P+   YN +L +L S   +  ++ I + M        V+TYN+L+  LCK   
Sbjct: 134 IGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDR 193

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-----------HLLNG- 425
           VD A     +M  K C PD V+Y TV+ ++C+ G + EA +L             L+NG 
Sbjct: 194 VDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRIKSFVPVYNALINGF 253

Query: 426 ------------------SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
                                 P +ITY+T+I+ L++ G +E A+ +  +M   G SP+ 
Sbjct: 254 CREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAVLAKMFLRGCSPNV 313

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T  +L+ G+    ++ EA+DL   + + G++    AY  +IHGLC   K+  A+ V + 
Sbjct: 314 HTFTSLMKGYFMGGRLCEALDLWNRMIQEGSEPNTVAYNTLIHGLCSYGKMVEAVSVSQK 373

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           M  +   P++T +ST++   A  G    A ++W K+I
Sbjct: 374 MERNGVFPNETTYSTLIDGFAKAGDLVGASEIWNKMI 410



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 74/229 (32%), Positives = 111/229 (48%), Gaps = 5/229 (2%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C       A  LI+ MA  N  P+       I+GL    + E A KVL  M   G  P+
Sbjct: 428 LCRNSMFNHALHLIENMANGNCPPNTITFNTFIKGLCCSGKTEWAMKVLNQMRQYGCAPN 487

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TYN ++ GL    + R A+ ++ E+     + +++TYNTIL      G FK A+    
Sbjct: 488 VTTYNEVLDGLFNAKRTREALQIVGEIEEMEIKSNLVTYNTILSGFCHAGMFKGALQIAG 547

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQ 305
             L  G  P  ITY  +I   CKQ  +  AI+++D +  +G   PD+ TY SL+   C  
Sbjct: 548 KLLVGGTKPDSITYNTVIYAYCKQGEVKTAIQLVDRLTKKGEGYPDVFTYTSLLWGVCNW 607

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR----GCWDAVDKIL 350
              D+AV+ ++ +++ G+ PN  T+N L+  L S+    G    VD IL
Sbjct: 608 IGVDEAVVHLDKMINEGICPNRATWNALVRGLFSKLGHLGPIHIVDNIL 656



 Score = 93.2 bits (230), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 62/245 (25%), Positives = 110/245 (44%), Gaps = 5/245 (2%)

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           S   +   +TY T++  LG     D +  +L +M     S     + I+IN   + GL +
Sbjct: 66  SNSFKHTPLTYTTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAE 125

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +A+ +F ++    C+P +  YN VL AL  E        + + +        + TYN L+
Sbjct: 126 QALKTFYRIGEFGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLL 185

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
             L K   ++ A  L  +M   G  PD +++ T++   CR  +VEEA +L   I     K
Sbjct: 186 KALCKNDRVDAARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRI-----K 240

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +I+G C+  K++   ++   M      PD   +ST++  +++ G  E A  +
Sbjct: 241 SFVPVYNALINGFCREHKMEEVFELFNEMAVEGIDPDVITYSTVINTLSEMGNVEMALAV 300

Query: 560 WQKLI 564
             K+ 
Sbjct: 301 LAKMF 305



 Score = 43.9 bits (102), Expect = 0.22,   Method: Compositional matrix adjust.
 Identities = 50/223 (22%), Positives = 89/223 (39%), Gaps = 36/223 (16%)

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-LLNGSSCSPCLITY 435
           LV   +N+ N + ++    +++  + VL  L  E  +  AL     + N +S     +TY
Sbjct: 17  LVPFVLNTINPLQNEQKDLNLLKESEVLNKLKNEPNILLALHFFKSIANSNSFKHTPLTY 76

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
            T+I  L  +  ++    L   M   GIS ++     +I  + RA   E+A+     IG+
Sbjct: 77  TTMIKRLGYERDIDGIQYLLQLMKLEGISCNEDLFVIVINAYRRAGLAEQALKTFYRIGE 136

Query: 496 RG----------------------------NKMRNSA-------YRLVIHGLCKSKKVDM 520
            G                            N M+          Y +++  LCK+ +VD 
Sbjct: 137 FGCKPSVKIYNHVLDALLSENKFQMINGIYNNMKRDGIELNVYTYNMLLKALCKNDRVDA 196

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           A ++L  M      PD   ++T+V  +   G  EEA +L  ++
Sbjct: 197 ARKLLAEMSYKGCIPDAVSYTTVVSSMCRLGKVEEARELSMRI 239


>gi|222613072|gb|EEE51204.1| hypothetical protein OsJ_32019 [Oryza sativa Japonica Group]
          Length = 615

 Score =  208 bits (529), Expect = 6e-51,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 217/423 (51%), Gaps = 12/423 (2%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P  H    LI    R  R++     L  +V  G   D IT+  ++ GLC   +   A+ +
Sbjct: 90  PTVHTYAILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDI 149

Query: 210 -LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF---WKDQLRKGCPPYLITYTILIE 265
            L  M+  GC PDV +YN +L+ + D  + ++A+       D    G PP +++Y  ++ 
Sbjct: 150 VLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLN 209

Query: 266 QVCKQC--------GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
              K+          + +A+EVL+ M   G  PD +TYNS+++  C  G+  +A+  +  
Sbjct: 210 GFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKK 269

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           + S G+EPN +TY++L++ L   G      KI D M +    P + TY  L+ G CK G 
Sbjct: 270 MRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGR 329

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           V  +   F+ MV    +PDI+TYNT++   C  G ++EA +LL  +      P ++TY T
Sbjct: 330 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 389

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+G  +   M+ A+ L+ +M+ +G+SP+ IT+  ++ G     +   A +L   I K G
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            ++  S Y +++HGLCK+   D A+++ + +  +  + +   F+ ++  +   G  +EA 
Sbjct: 450 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 509

Query: 558 KLW 560
            L+
Sbjct: 510 DLF 512



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 121/420 (28%), Positives = 204/420 (48%), Gaps = 12/420 (2%)

Query: 158 LIRGLIRIDRIEKASK-VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-- 214
           L++GL    R   A   VL+ M   G +PD  +YN ++ GLC   + + A+ LL  M+  
Sbjct: 133 LLKGLCADKRTSDAMDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADD 192

Query: 215 -VSGCEPDVITYNTILRTMFDNG--------KFKQAIGFWKDQLRKGCPPYLITYTILIE 265
              G  PDV++YNT+L   F  G           +A+      ++ G  P  +TY  ++ 
Sbjct: 193 RGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILH 252

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             C       AI  L  M  +G  P++VTY+SL+N+ CK G+  +A  + +++  RG+EP
Sbjct: 253 GYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEP 312

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           +  TY TLL      G     +K+ D+M      P + TYN LI+G C  G +D A    
Sbjct: 313 DIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLL 372

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
             MVS   +PDIVTY T++   C+   +++AL L   +  S  SP +ITYN ++ GL   
Sbjct: 373 ASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHT 432

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
                A  LY  + ++G   +  T+  ++ G C+ +  +EA+ + + +     ++    +
Sbjct: 433 RRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTF 492

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++I  L K  ++D A  +     ++   PD   +S + + + + G  EE   L+  + E
Sbjct: 493 NIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEE 552



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 214/451 (47%), Gaps = 18/451 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ----IPDFHFCINLIRGLIRIDRIEKA 171
           D  T   +L+  C+  + +DA   +DI+ RR      IPD     NL++GL   +R ++A
Sbjct: 126 DAITFTPLLKGLCADKRTSDA---MDIVLRRMTELGCIPDVFSYNNLLKGLCDENRSQEA 182

Query: 172 SKVLQIMV---MSGGVPDTITYNMMVGGLCKRG--------QIRSAIALLDEMSVSGCEP 220
            ++L +M      G  PD ++YN ++ G  K G         +  A+ +L+ M  +G  P
Sbjct: 183 LELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTAQAMDKAMEVLNTMVKNGVMP 242

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D +TYN+IL     +G+ K+AIG  K     G  P ++TY+ L+  +CK      A ++ 
Sbjct: 243 DCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTYSSLMNYLCKNGRSTEARKIF 302

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           D M   G  PDI TY +L+   CK+G+  ++  + + ++  G++P+ ITYNTL+      
Sbjct: 303 DSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLA 362

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G  D   K+L  M      P + TY  LING C+   +D A+  F +MVS    P+I+TY
Sbjct: 363 GKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITY 422

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N +L  L        A +L   +  S     L TYN ++ GL K    ++A+ ++  +  
Sbjct: 423 NIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCL 482

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
             +  +  T   +I    +  +++EA DL       G       Y L+   L +   ++ 
Sbjct: 483 TDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEE 542

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
              +   M  +    D  + ++IV+K+   G
Sbjct: 543 LDDLFLSMEENGCSADSRMLNSIVRKLLQRG 573



 Score =  132 bits (332), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 183/416 (43%), Gaps = 48/416 (11%)

Query: 84  VLAVNKKLRGLTITKKSHDP-----SLPSSDGPFVENDEKTNNKILQNFCSRG---KLT- 134
           V + N  L+GL    +S +       +    G     D  + N +L  F   G   KLT 
Sbjct: 163 VFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGIQTKLTA 222

Query: 135 ----DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
                A ++++ M +   +PD     +++ G     + ++A   L+ M   G  P+ +TY
Sbjct: 223 QAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVEPNVVTY 282

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           + ++  LCK G+   A  + D M+  G EPD+ TY T+L+     G+  ++   +   +R
Sbjct: 283 SSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKLFDLMVR 342

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P +ITY  LI+  C    +  A ++L  M   G  PDIVTY +L+N  C+  + DD
Sbjct: 343 IGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGTLINGYCRVSRMDD 402

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIM---------------- 353
           A+ +   ++S G+ PN ITYN +L  L  +R    A +  + I                 
Sbjct: 403 ALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSGTQLELSTYNIILH 462

Query: 354 -----NEASHSPTVF-------------TYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                N    +  +F             T+NI+I  L K G +D A + F    +    P
Sbjct: 463 GLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAKDLFAAHSANGLVP 522

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
           D+ TY+ +   L ++G L E   L   +  + CS      N+++  L ++G + +A
Sbjct: 523 DVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKLLQRGDITRA 578



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 152/317 (47%), Gaps = 2/317 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE +  T + ++   C  G+ T+A K+ D M +R   PD      L++G  +  R
Sbjct: 272 SDG--VEPNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGR 329

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + ++ K+  +MV  G  PD ITYN ++ G C  G++  A  LL  M   G +PD++TY T
Sbjct: 330 VIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEATKLLASMVSVGVKPDIVTYGT 389

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++       +   A+  +K+ +  G  P +ITY I+++ +      A A E+   +   G
Sbjct: 390 LINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGLFHTRRTAAAKELYVSITKSG 449

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              ++ TYN +++  CK    D+A+ +  NL    ++  + T+N ++ +L   G  D   
Sbjct: 450 TQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLETRTFNIMIGALLKCGRMDEAK 509

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            +    +     P V TY+++   L + G ++   + F  M    C  D    N+++  L
Sbjct: 510 DLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLSMEENGCSADSRMLNSIVRKL 569

Query: 408 CKEGMLNEALQLLHLLN 424
            + G +  A   L +++
Sbjct: 570 LQRGDITRAGTYLFMID 586



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/309 (25%), Positives = 139/309 (44%), Gaps = 49/309 (15%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH--SPTVFTYN 366
           +DA  V + LL RG   +    N  L  +       AV +   +    +   +PTV TY 
Sbjct: 37  EDARHVFDELLRRGRGASIYGLNRALADVARHSPAAAVSRYNRMARAGAGKVTPTVHTYA 96

Query: 367 ILINGLCKYGLVDRAINSFNQMVSK----------------------------------- 391
           ILI   C+ G +D    +   +V K                                   
Sbjct: 97  ILIGCCCRAGRLDLGFAALGNVVKKGFRVDAITFTPLLKGLCADKRTSDAMDIVLRRMTE 156

Query: 392 -NCQPDIVTYNTVLGALCKEGMLNEALQLLHLL---NGSSCSPCLITYNTLIDGLAKKG- 446
             C PD+ +YN +L  LC E    EAL+LLH++    G    P +++YNT+++G  K+G 
Sbjct: 157 LGCIPDVFSYNNLLKGLCDENRSQEALELLHMMADDRGGGSPPDVVSYNTVLNGFFKEGI 216

Query: 447 -------CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
                   M+KAM +   M++NG+ PD +T+ +++ G+C + Q +EA+  LK++   G +
Sbjct: 217 QTKLTAQAMDKAMEVLNTMVKNGVMPDCMTYNSILHGYCSSGQPKEAIGTLKKMRSDGVE 276

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +++ LCK+ +   A ++ + M     +PD   + T+++    +G   E+ KL
Sbjct: 277 PNVVTYSSLMNYLCKNGRSTEARKIFDSMTKRGLEPDIATYRTLLQGHCKEGRVIESEKL 336

Query: 560 WQKLIEWKV 568
           +  ++   V
Sbjct: 337 FDLMVRIGV 345



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 73/292 (25%), Positives = 126/292 (43%), Gaps = 35/292 (11%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T   +LQ  C  G++ ++ KL D+M R    PD      LI G     ++++A+
Sbjct: 310 LEPDIATYRTLLQGHCKEGRVIESEKLFDLMVRIGVKPDIITYNTLIDGCCLAGKMDEAT 369

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L  MV  G  PD +TY  ++ G C+  ++  A+AL  EM  SG  P++ITYN IL+ +
Sbjct: 370 KLLASMVSVGVKPDIVTYGTLINGYCRVSRMDDALALFKEMVSSGVSPNIITYNIILQGL 429

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK----------------------- 269
           F   +   A   +    + G    L TY I++  +CK                       
Sbjct: 430 FHTRRTAAAKELYVSITKSGTQLELSTYNIILHGLCKNNLTDEALRMFQNLCLTDLQLET 489

Query: 270 -----------QCG-IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                      +CG +  A ++    +  G  PD+ TY+ +     +QG  ++   +  +
Sbjct: 490 RTFNIMIGALLKCGRMDEAKDLFAAHSANGLVPDVRTYSLMAENLIEQGSLEELDDLFLS 549

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +   G   +S   N+++  L  RG        L +++E   S    T + L+
Sbjct: 550 MEENGCSADSRMLNSIVRKLLQRGDITRAGTYLFMIDEKHFSLEASTASFLL 601


>gi|91806021|gb|ABE65739.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 450

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 115/386 (29%), Positives = 201/386 (52%), Gaps = 4/386 (1%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV  G  P  IT+N ++ GLC  G++  A AL+++M   G   DV+TY TI+  M   G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            K A+            P ++ Y+ +I+++CK    + A  +  +M  +G +P++ TYN 
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  C  G++ DA  ++ +++ R + P+ +T+N L+ +    G     +K+ D M    
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TYN +I G CK+   D A + F+ M S    PD+VT+NT++   C+   ++E +
Sbjct: 181 IFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMAS----PDVVTFNTIIDVYCRAKRVDEGM 236

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           QLL  ++         TYNTLI G  +   +  A  L+ +M+ +G+ PD IT   L++GF
Sbjct: 237 QLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGF 296

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C  +++EEA++L + I      +   AY ++IHG+CK  KVD A  +   +     +PD 
Sbjct: 297 CENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDV 356

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
             ++ ++          +A  L+ K+
Sbjct: 357 QTYNVMISGFCGKSAISDANVLFHKM 382



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/436 (27%), Positives = 216/436 (49%), Gaps = 42/436 (9%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL    R+ +A+ ++  MV  G   D +TY  +V G+CK G  +SA+ LL +M  + 
Sbjct: 16  LINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGDTKSALNLLSKMEETH 75

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +PDV+ Y+ I+  +  +G    A   + + L KG  P + TY  +I+  C     + A 
Sbjct: 76  IKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQ 135

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L DM     +PD++T+N+L++ S K+GK  +A  + + +L R + P+++TYN++++  
Sbjct: 136 RLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGF 195

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVF---------------------------------T 364
                +D    + D+M  AS     F                                 T
Sbjct: 196 CKHNRFDDAKHMFDLM--ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTT 253

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN LI+G C+   ++ A + F +M+S    PD +T N +L   C+   L EAL+L  ++ 
Sbjct: 254 YNTLIHGFCEVDNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQ 313

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
            S      + YN +I G+ K   +++A  L+  +  +G+ PD  T+  +I GFC    + 
Sbjct: 314 MSKIDLDTVAYNIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAIS 373

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +A  L  ++   G++  NS Y  +I G  K+ ++D +I+++  M S+ +  D    +  +
Sbjct: 374 DANVLFHKMKDNGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGD----AFTI 429

Query: 545 KKVAD---DGMTEEAY 557
           K VAD   DG  ++++
Sbjct: 430 KMVADLITDGRLDKSF 445



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/392 (28%), Positives = 180/392 (45%), Gaps = 6/392 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+   C  G    A  L+  M   +  PD      +I  L +      A  + 
Sbjct: 44  DVVTYGTIVNGMCKMGDTKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLF 103

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+  TYN M+ G C  G+   A  LL +M      PDV+T+N ++      
Sbjct: 104 SEMLEKGIAPNVFTYNCMIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKE 163

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A     + L +   P  +TY  +I   CK      A  + D MA    SPD+VT+
Sbjct: 164 GKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMFDLMA----SPDVVTF 219

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++  C+  + D+ + ++  +  RG+  N+ TYNTL+H        +A   +   M  
Sbjct: 220 NTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEVDNLNAAQDLFQEMIS 279

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   T NIL+ G C+   ++ A+  F  +       D V YN ++  +CK   ++E
Sbjct: 280 HGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAYNIIIHGMCKGSKVDE 339

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   L      P + TYN +I G   K  +  A VL+ +M +NG  PD+ T+ TLI 
Sbjct: 340 AWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKDNGHEPDNSTYNTLIR 399

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           G  +A +++++++L+ E+  R N     A+ +
Sbjct: 400 GCLKAGEIDKSIELISEM--RSNGFSGDAFTI 429



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 80/303 (26%), Positives = 138/303 (45%), Gaps = 5/303 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++      GKL +A KL D M  R   PD     ++I G  + +R + A  + 
Sbjct: 149 DVLTFNALISASVKEGKLFEAEKLCDEMLHRCIFPDTVTYNSMIYGFCKHNRFDDAKHMF 208

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M      PD +T+N ++   C+  ++   + LL E+S  G   +  TYNT++    + 
Sbjct: 209 DLM----ASPDVVTFNTIIDVYCRAKRVDEGMQLLREISRRGLVANTTTYNTLIHGFCEV 264

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A   +++ +  G  P  IT  IL+   C+   +  A+E+ + + +     D V Y
Sbjct: 265 DNLNAAQDLFQEMISHGVCPDTITCNILLYGFCENEKLEEALELFEVIQMSKIDLDTVAY 324

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N +++  CK  K D+A  +  +L   G+EP+  TYN ++     +      + +   M +
Sbjct: 325 NIIIHGMCKGSKVDEAWDLFCSLPIHGVEPDVQTYNVMISGFCGKSAISDANVLFHKMKD 384

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             H P   TYN LI G  K G +D++I   ++M S     D  T   V   L  +G L++
Sbjct: 385 NGHEPDNSTYNTLIRGCLKAGEIDKSIELISEMRSNGFSGDAFTIKMV-ADLITDGRLDK 443

Query: 416 ALQ 418
           +  
Sbjct: 444 SFS 446



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 51/187 (27%), Positives = 89/187 (47%)

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           MV     P ++T+NT++  LC EG + EA  L++ + G      ++TY T+++G+ K G 
Sbjct: 1   MVEIGLTPVVITFNTLINGLCLEGRVLEAAALVNKMVGKGLHIDVVTYGTIVNGMCKMGD 60

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            + A+ L  +M E  I PD + +  +I   C+     +A  L  E+ ++G       Y  
Sbjct: 61  TKSALNLLSKMEETHIKPDVVIYSAIIDRLCKDGHHSDAQYLFSEMLEKGIAPNVFTYNC 120

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +I G C   +   A ++L  MI     PD   F+ ++     +G   EA KL  +++   
Sbjct: 121 MIDGFCSFGRWSDAQRLLRDMIEREINPDVLTFNALISASVKEGKLFEAEKLCDEMLHRC 180

Query: 568 VFEKGTT 574
           +F    T
Sbjct: 181 IFPDTVT 187


>gi|9502386|gb|AAF88093.1|AC025417_21 T12C24.22 [Arabidopsis thaliana]
          Length = 1245

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 208/395 (52%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  VL  ++  G  PDT T+N ++ GL   G++  A+ L+D M  +GC+PDV+TYN+I+ 
Sbjct: 132 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 191

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +  +G    A+   +    +     + TY+ +I+ +C+   I  AI +  +M  +G   
Sbjct: 192 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 251

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            +VTYNSLV   CK GK++D  L++ +++SR + PN IT+N LL      G     +++ 
Sbjct: 252 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 311

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M     SP + TYN L++G C    +  A N  + MV   C PDIVT+ +++   C  
Sbjct: 312 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 371

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             +++ +++   ++        +TY+ L+ G  + G ++ A  L+ +M+ +G+ PD +T+
Sbjct: 372 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 431

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             L+ G C   ++E+A+++ +++ K    +    Y  +I G+CK  KV+ A  +   +  
Sbjct: 432 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 491

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              KP+   ++ ++  +   G   EA  L +K+ E
Sbjct: 492 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 526



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 200/410 (48%), Gaps = 4/410 (0%)

Query: 112 FVEN----DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
            VEN    D  T N I+   C  G  + A  L+  M  RN   D      +I  L R   
Sbjct: 174 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 233

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I+ A  + + M   G     +TYN +V GLCK G+      LL +M      P+VIT+N 
Sbjct: 234 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 293

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           +L      GK ++A   +K+ + +G  P +ITY  L++  C Q  ++ A  +LD M    
Sbjct: 294 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 353

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           CSPDIVT+ SL+   C   + DD + V  N+  RG+  N++TY+ L+      G     +
Sbjct: 354 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 413

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M      P V TY IL++GLC  G +++A+  F  +        IV Y T++  +
Sbjct: 414 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 473

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CK G + +A  L   L      P ++TY  +I GL KKG + +A +L  +M E+G +P+D
Sbjct: 474 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 533

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
            T+ TLI    R   +  +  L++E+   G     S+ ++VI  L  + K
Sbjct: 534 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 583



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 221/445 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC   K   A  ++  + +    PD      LI+GL    ++ +A  ++  M
Sbjct: 115 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 174

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V +G  PD +TYN +V G+C+ G    A+ LL +M     + DV TY+TI+ ++  +G  
Sbjct: 175 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 234

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI  +K+   KG    ++TY  L+  +CK         +L DM      P+++T+N L
Sbjct: 235 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 294

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK  +A  +   +++RG+ PN ITYNTL+     +      + +LD+M     
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP + T+  LI G C    VD  +  F  +  +    + VTY+ ++   C+ G +  A +
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P ++TY  L+DGL   G +EKA+ ++  + ++ +    + + T+I G C
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 474

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +VE+A +L   +  +G K     Y ++I GLCK   +  A  +L  M      P+D 
Sbjct: 475 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 534

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++T+++    DG    + KL +++
Sbjct: 535 TYNTLIRAHLRDGDLTASAKLIEEM 559



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 228/435 (52%), Gaps = 6/435 (1%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTI 188
           K  DA  L   M R   +P     ++  R    I R ++ + VL     + ++G   +  
Sbjct: 58  KKDDAIALFQEMIRSRPLPSL---VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY 114

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T N+M+   C+  +   A ++L ++   G EPD  T+NT+++ +F  GK  +A+      
Sbjct: 115 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 174

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  GC P ++TY  ++  +C+    + A+++L  M       D+ TY+++++  C+ G  
Sbjct: 175 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 234

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           D A+ +   + ++G++ + +TYN+L+  L   G W+    +L  M      P V T+N+L
Sbjct: 235 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 294

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           ++   K G +  A   + +M+++   P+I+TYNT++   C +  L+EA  +L L+  + C
Sbjct: 295 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 354

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           SP ++T+ +LI G      ++  M ++  + + G+  + +T+  L+ GFC++ +++ A +
Sbjct: 355 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 414

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L +E+   G       Y +++ GLC + K++ A+++ E +  S+      +++TI++ + 
Sbjct: 415 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 474

Query: 549 DDGMTEEAYKLWQKL 563
             G  E+A+ L+  L
Sbjct: 475 KGGKVEDAWNLFCSL 489



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 215/431 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N +++     GK+++A  L+D M      PD     +++ G+ R      A  
Sbjct: 145 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 204

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ M       D  TY+ ++  LC+ G I +AI+L  EM   G +  V+TYN+++R + 
Sbjct: 205 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 264

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK+       KD + +   P +IT+ +L++   K+  +  A E+  +M   G SP+I+
Sbjct: 265 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 324

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L++  C Q +  +A  +++ ++     P+ +T+ +L+         D   K+   +
Sbjct: 325 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 384

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           ++        TY+IL+ G C+ G +  A   F +MVS    PD++TY  +L  LC  G L
Sbjct: 385 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 444

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +AL++   L  S     ++ Y T+I+G+ K G +E A  L+  +   G+ P+ +T+  +
Sbjct: 445 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 504

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+   + EA  LL+++ + GN   +  Y  +I    +   +  + +++E M S  +
Sbjct: 505 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 564

Query: 534 KPDDTVFSTIV 544
             D +    ++
Sbjct: 565 SADASSIKMVI 575



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 178/368 (48%), Gaps = 12/368 (3%)

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDV-------ITYNTILRTMFDNGKFKQAIGFWKDQL 249
           L K G +R+ +        S CE D        + +   LR+   + K   AI  +++ +
Sbjct: 11  LLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMI 70

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R    P L+ ++     + +       ++    + + G + +I T N ++N  C+  K  
Sbjct: 71  RSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTC 130

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A  V+  ++  G EP++ T+NTL+  L   G       ++D M E    P V TYN ++
Sbjct: 131 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIV 190

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           NG+C+ G    A++   +M  +N + D+ TY+T++ +LC++G ++ A+ L   +      
Sbjct: 191 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 250

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
             ++TYN+L+ GL K G      +L   M+   I P+ IT   L+  F +  +++EA +L
Sbjct: 251 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 310

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK---- 545
            KE+  RG       Y  ++ G C   ++  A  +L+LM+ ++  PD   F++++K    
Sbjct: 311 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 370

Query: 546 -KVADDGM 552
            K  DDGM
Sbjct: 371 VKRVDDGM 378



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 108/460 (23%), Positives = 205/460 (44%), Gaps = 65/460 (14%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C + +L++A+ ++D+M R    PD     +LI+G   + R++   KV + +
Sbjct: 325 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 384

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G V + +TY+++V G C+ G+I+ A  L  EM   G  PDV+TY  +L  + DNGK 
Sbjct: 385 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 444

Query: 239 KQAIGFWKDQLR-----------------------------------KGCPPYLITYTIL 263
           ++A+  ++D  +                                   KG  P ++TYT++
Sbjct: 445 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 504

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I  +CK+  ++ A  +L  M  +G +P+  TYN+L+    + G    +  +I  + S G 
Sbjct: 505 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 564

Query: 324 EPNSITYNTLLHSLGS-------RGCWDAVDKILDIMNEASHSPTV----------FTYN 366
             ++ +   ++  L S       R C     K    + E S S  +          F  N
Sbjct: 565 SADASSIKMVIDMLLSAMKRLTLRYCLSKGSKSRQDLLELSGSEKIRLSSLTFVKMFPCN 624

Query: 367 ILINGLCKYGLVDRAINS--FNQMVSKNCQPDIVTYNT-------VLGALCKEGMLNEAL 417
            +   L    +  R +NS   N+ + K  +  ++           V   L   G+ +   
Sbjct: 625 TITTSLNVNTIEARGMNSAELNRDLRKLRRSSVLKKFKNRDVRVLVTNELLTWGLEDAEC 684

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            L+  L   + +         +    +K  +  A  L+ +M++ GI+P+ IT+ +LI GF
Sbjct: 685 DLMVDLELPTDAVHYAHRAGRMRRPGRKMTVVTAEELHKEMIQRGIAPNTITYSSLIDGF 744

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           C+ ++++EA  +L  +  +G    +S  R ++ GL + K+
Sbjct: 745 CKENRLDEANQMLDLMVTKG----DSDIRYLLAGLMRKKR 780


>gi|168007580|ref|XP_001756486.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162692525|gb|EDQ78882.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 528

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 113/409 (27%), Positives = 206/409 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N +++ F   G+L  A ++   M  +   PD +    L+  L +  R+++A    
Sbjct: 99  DRFAYNVLIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFF 158

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+  TYN+++    K GQ+  A+ L  EM   G +P V+TYN +L  +   
Sbjct: 159 DAMLERGLTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSA 218

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   A   +      GC P   TY+ L+  + K   +  A +V  +M   G + D+V Y
Sbjct: 219 GRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNY 278

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NSL+    K G  D    ++  +  +G  P++ ++NT++ +LG     DA  ++   M E
Sbjct: 279 NSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVE 338

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P + +YNILI+   ++G   +A     +MV     P+  TYN+++  L  +G ++E
Sbjct: 339 SGCKPDLISYNILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDE 398

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  +L  +  + C P ++TYN L+D L K+G  ++A  L+ QM + G+ PD +++   I 
Sbjct: 399 AFAVLEEMETAGCRPDVVTYNRLMDMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRID 458

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           G    D+++EA+ L K++   G  +  + YR++I    ++   ++  Q+
Sbjct: 459 GLAFDDRLDEALVLFKDMKAVGCPVDKAMYRILIRAAHRAGDTELEAQL 507



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 200/414 (48%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P  H    LI  L+     E+A  V + +V  G   D   YN+++    + GQ+ SA+ +
Sbjct: 63  PTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIRYFGRSGQLDSAMEM 122

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
             EM + G EPD  TY  ++  +   G+ ++A  F+   L +G  P + TY +L++   K
Sbjct: 123 FREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRK 182

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A+ +  +M   G  P +VTYN L++  C  G+   A  + + +   G  P+S T
Sbjct: 183 VGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYT 242

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y+TL++ LG  G  +   K+   M +   +  +  YN L+  L K G +DR      +M 
Sbjct: 243 YSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMS 302

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            K   PD  ++NT++ AL K    + A ++   +  S C P LI+YN LID  A+ G   
Sbjct: 303 RKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAA 362

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A  +  +M+E G  P+  T+ +LI       QV+EA  +L+E+   G +     Y  ++
Sbjct: 363 QARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLM 422

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             L K  +   A ++ + M     +PD   ++  +  +A D   +EA  L++ +
Sbjct: 423 DMLGKRGENQRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDM 476



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 179/358 (50%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A  L ++     C P V  +  ++  + ++G+F++A   +K  ++KGC      Y +LI 
Sbjct: 49  AFDLFNQAESFACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNVLIR 108

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
              +   +  A+E+  +M I+G  PD  TY  LVN   K G+  +A    + +L RG+ P
Sbjct: 109 YFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTP 168

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N  TYN L+ +    G  D    +   M      P+V TYNIL++ LC  G V  A   F
Sbjct: 169 NIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLF 228

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           ++M    C PD  TY+T++  L K G + EA ++   +     +  L+ YN+L+  LAK 
Sbjct: 229 HKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKA 288

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G M++   L  +M   G  PD  +  T++    +A++ + A ++   + + G K    +Y
Sbjct: 289 GNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDLISY 348

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            ++I    +      A Q+LE M+ + + P+   +++++  +A DG  +EA+ + +++
Sbjct: 349 NILIDSYARFGDAAQARQMLEEMVEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEM 406



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 183/379 (48%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E DE T   ++      G++ +A    D M  R   P+      L+    ++ +++ A  
Sbjct: 132 EPDEYTYGFLVNALGKAGRVQEARSFFDAMLERGLTPNIPTYNLLMDAFRKVGQLDMALG 191

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G  P  +TYN+++  LC  G++ +A  L  +M+  GC PD  TY+T++  + 
Sbjct: 192 LFAEMKRRGFQPSVVTYNILLDALCSAGRVGAARKLFHKMTGDGCSPDSYTYSTLVNGLG 251

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +G+ ++A   +++ + +G    L+ Y  L+  + K   + R  +++ +M+ +G  PD  
Sbjct: 252 KSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATLAKAGNMDRVWKLMKEMSRKGFHPDAF 311

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           ++N++++   K  K D A  V   ++  G +P+ I+YN L+ S    G      ++L+ M
Sbjct: 312 SFNTIMDALGKANKPDAAREVFARMVESGCKPDLISYNILIDSYARFGDAAQARQMLEEM 371

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            EA   P   TYN LI+ L   G VD A     +M +  C+PD+VTYN ++  L K G  
Sbjct: 372 VEAGFIPETKTYNSLIHWLATDGQVDEAFAVLEEMETAGCRPDVVTYNRLMDMLGKRGEN 431

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             A +L   +      P  ++Y   IDGLA    +++A+VL+  M   G   D   +R L
Sbjct: 432 QRAARLFQQMKDKGVEPDTLSYAVRIDGLAFDDRLDEALVLFKDMKAVGCPVDKAMYRIL 491

Query: 474 IWGFCRADQVEEAVDLLKE 492
           I    RA   E    L  E
Sbjct: 492 IRAAHRAGDTELEAQLKHE 510



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 96/328 (29%), Positives = 169/328 (51%), Gaps = 7/328 (2%)

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F QA  F        C P +  +T LI+ +       RA  V   +  +GC  D   YN 
Sbjct: 53  FNQAESF-------ACSPTVHAFTKLIDILVNSGEFERAELVYKKLVQKGCQLDRFAYNV 105

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+ +  + G+ D A+ +   +  +G EP+  TY  L+++LG  G         D M E  
Sbjct: 106 LIRYFGRSGQLDSAMEMFREMKIKGSEPDEYTYGFLVNALGKAGRVQEARSFFDAMLERG 165

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +P + TYN+L++   K G +D A+  F +M  +  QP +VTYN +L ALC  G +  A 
Sbjct: 166 LTPNIPTYNLLMDAFRKVGQLDMALGLFAEMKRRGFQPSVVTYNILLDALCSAGRVGAAR 225

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L H + G  CSP   TY+TL++GL K G +E+A  ++ +M++ G++ D + + +L+   
Sbjct: 226 KLFHKMTGDGCSPDSYTYSTLVNGLGKSGRVEEAHKVFREMVDRGVAVDLVNYNSLLATL 285

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +A  ++    L+KE+ ++G      ++  ++  L K+ K D A +V   M+ S  KPD 
Sbjct: 286 AKAGNMDRVWKLMKEMSRKGFHPDAFSFNTIMDALGKANKPDAAREVFARMVESGCKPDL 345

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             ++ ++   A  G   +A ++ ++++E
Sbjct: 346 ISYNILIDSYARFGDAAQARQMLEEMVE 373


>gi|414590400|tpg|DAA40971.1| TPA: hypothetical protein ZEAMMB73_404079 [Zea mays]
          Length = 745

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 219/443 (49%), Gaps = 3/443 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L+  C  G++ DA +L D MA     PD      LI G   +  +E A K+L  MV 
Sbjct: 263 NILLKALCDAGRVKDARQLFDEMA---SAPDVVTYGILIHGHCALGELENAVKLLDEMVA 319

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+   Y  +V  LC +G I  A+ ++++M       D   Y T+L    + G    
Sbjct: 320 GGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVS 379

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A  ++ +  RKG     +TYT +I  +C+   +  A ++L +M       D VTY  L++
Sbjct: 380 ARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLID 439

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK+GK  +A  + N ++ RG+ PN +TY  L   L  +G   A +++L  M+      
Sbjct: 440 GYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLEL 499

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN LINGLCK G +++A+ +   M +   +PD+ TY T++ ALCK G L+ A  LL
Sbjct: 500 NACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLL 559

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++TYN L++G    G +E    L   M+E  I P+  T+ +L+  +C  
Sbjct: 560 QEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIE 619

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           + ++   ++ K +  R      + Y ++I G CK++ +  A+   + MI   ++   T +
Sbjct: 620 NNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSY 679

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           S +++ +       EA +L+  +
Sbjct: 680 SALIRLLNKKKKFVEARELFHDM 702



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 120/446 (26%), Positives = 220/446 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C+ G+L +A KL+D M      P+     +++  L     I  A +V++ MV   
Sbjct: 297 LIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRK 356

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            + D   Y  ++ G C +G + SA    DEM   G   D +TY T++  +    + ++A 
Sbjct: 357 VILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAE 416

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++   +      +TYT+LI+  CK+  +A A ++ + M   G +P++VTY +L +  
Sbjct: 417 KLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGL 476

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CKQG    A  +++ + ++G+E N+ TYN+L++ L   G  +   + +  M+ A   P V
Sbjct: 477 CKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDV 536

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TY  LI+ LCK G +DRA +   +M+ K  +P IVTYN ++   C  G +    +LL  
Sbjct: 537 YTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDW 596

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +   +  P   TYN+L+     +  M+    +Y  M    + P++ T+  LI G C+A  
Sbjct: 597 MLEKNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARN 656

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++EA+    E+ ++G ++  ++Y  +I  L K KK   A ++   M       +  V+  
Sbjct: 657 MKEALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDF 716

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
            +    ++   E    L  +L+E  +
Sbjct: 717 YIDLNFNEDNLESTLALCDELVEASI 742



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 188/397 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +      ++   C +G ++DA ++++ M +R  I D      ++ G      +  A 
Sbjct: 322 VEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDLVSAR 381

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +    M   G   D +TY  M+ GLC+  ++  A  LL EM     + D +TY  ++   
Sbjct: 382 RWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVLIDGY 441

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK  +A       +++G  P ++TYT L + +CKQ  +  A E+L +M+ +G   + 
Sbjct: 442 CKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGLELNA 501

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYNSL+N  CK G  + A+  + ++ +  ++P+  TY TL+ +L   G  D    +L  
Sbjct: 502 CTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHSLLQE 561

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +    PT+ TYN+L+NG C  G V+      + M+ KN  P+  TYN+++   C E  
Sbjct: 562 MLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQYCIENN 621

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +    ++   +      P   TYN LI G  K   M++A+  + +M++ G      ++  
Sbjct: 622 MKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKEALYFHDEMIQKGFRLTATSYSA 681

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           LI    +  +  EA +L  ++ K G    +  Y   I
Sbjct: 682 LIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYI 718



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 99/358 (27%), Positives = 183/358 (51%), Gaps = 3/358 (0%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           +YN+++  LC  G+++ A  L DEM+ +   PDV+TY  ++      G+ + A+    + 
Sbjct: 261 SYNILLKALCDAGRVKDARQLFDEMASA---PDVVTYGILIHGHCALGELENAVKLLDEM 317

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  G  P    YT ++  +C +  I+ A+ V++DM       D   Y ++++  C +G  
Sbjct: 318 VAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMVQRKVILDEALYTTVLSGFCNKGDL 377

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             A    + +  +G+  + +TY T+++ L      +  +K+L  M          TY +L
Sbjct: 378 VSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLLQEMWARRLDVDEVTYTVL 437

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I+G CK G +  A    N MV +   P++VTY  +   LCK+G +  A +LLH ++    
Sbjct: 438 IDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQGDVQAANELLHEMSNKGL 497

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
                TYN+LI+GL K G +E+AM     M    + PD  T+ TLI   C++  ++ A  
Sbjct: 498 ELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTYTTLIDALCKSGDLDRAHS 557

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           LL+E+  +G K     Y ++++G C S +V+   ++L+ M+     P+   +++++K+
Sbjct: 558 LLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLEKNIHPNAATYNSLMKQ 615



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 171/383 (44%), Gaps = 35/383 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE     +L  FC++G L  A +  D M R+    D      +I GL R   +E+A K+L
Sbjct: 360 DEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELEEAEKLL 419

Query: 176 Q-----------------------------------IMVMSGGVPDTITYNMMVGGLCKR 200
           Q                                    MV  G  P+ +TY  +  GLCK+
Sbjct: 420 QEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALTDGLCKQ 479

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G +++A  LL EMS  G E +  TYN+++  +   G  +QA+    D       P + TY
Sbjct: 480 GDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLKPDVYTY 539

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           T LI+ +CK   + RA  +L +M  +G  P IVTYN L+N  C  G+ +    +++ +L 
Sbjct: 540 TTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKLLDWMLE 599

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           + + PN+ TYN+L+          +  +I   M      P   TYNILI G CK   +  
Sbjct: 600 KNIHPNAATYNSLMKQYCIENNMKSTTEIYKGMRSRDVGPNENTYNILIKGHCKARNMKE 659

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+   ++M+ K  +    +Y+ ++  L K+    EA +L H +     +     Y+  ID
Sbjct: 660 ALYFHDEMIQKGFRLTATSYSALIRLLNKKKKFVEARELFHDMRKEGLTAESDVYDFYID 719

Query: 441 GLAKKGCMEKAMVLYGQMMENGI 463
               +  +E  + L  +++E  I
Sbjct: 720 LNFNEDNLESTLALCDELVEASI 742



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 176/375 (46%), Gaps = 7/375 (1%)

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
           R  +  AI L  E+       +V +YN +L+ + D G+ K A   + +       P ++T
Sbjct: 241 RLPLDEAIELFQELP----HKNVCSYNILLKALCDAGRVKDARQLFDEM---ASAPDVVT 293

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           Y ILI   C    +  A+++LD+M   G  P+   Y S+V   C +G   DA+ V+ +++
Sbjct: 294 YGILIHGHCALGELENAVKLLDEMVAGGVEPNATVYTSVVALLCDKGWISDALRVVEDMV 353

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            R +  +   Y T+L    ++G   +  +  D M     +    TY  +INGLC+   ++
Sbjct: 354 QRKVILDEALYTTVLSGFCNKGDLVSARRWFDEMQRKGLATDGVTYTTMINGLCRAVELE 413

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A     +M ++    D VTY  ++   CK G + EA Q+ + +     +P ++TY  L 
Sbjct: 414 EAEKLLQEMWARRLDVDEVTYTVLIDGYCKRGKMAEAFQMHNAMVQRGVTPNVVTYTALT 473

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DGL K+G ++ A  L  +M   G+  +  T+ +LI G C+A  +E+A+  + ++     K
Sbjct: 474 DGLCKQGDVQAANELLHEMSNKGLELNACTYNSLINGLCKAGYLEQAMRTMADMDTACLK 533

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +I  LCKS  +D A  +L+ M+    KP    ++ ++      G  E   KL
Sbjct: 534 PDVYTYTTLIDALCKSGDLDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKKL 593

Query: 560 WQKLIEWKVFEKGTT 574
              ++E  +     T
Sbjct: 594 LDWMLEKNIHPNAAT 608


>gi|224100421|ref|XP_002311869.1| predicted protein [Populus trichocarpa]
 gi|222851689|gb|EEE89236.1| predicted protein [Populus trichocarpa]
          Length = 470

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 129/443 (29%), Positives = 221/443 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C  G+L    KLI  M  +   P+ +   ++I  L +  +++ A +VL+ M+  G
Sbjct: 16  VINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDDAERVLREMINQG 75

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPDT+ Y  ++ G CK G I++A  L DEM      PD I Y  ++  +   GK  +A 
Sbjct: 76  IVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVICGLCRCGKMMEAD 135

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +     +G  P  +TYT LI+  CK   + +A  + + M   G +P++VTY +L +  
Sbjct: 136 KVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGL 195

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G+ D A  +++ +  +G++ N  TYN+L++ L   G      K+++ M  A   P  
Sbjct: 196 CKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDT 255

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+  L++  CK G + +A     +M+ +  QP ++T+N ++   C  GML +  +LL  
Sbjct: 256 ITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAW 315

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   TYN+L+     +  M     +Y  M   G+ PD  T+  LI G C+A  
Sbjct: 316 MLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARN 375

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++EA  L KE+ ++G  +  S+Y  +I G  K KK+  A ++ E M       D  +++ 
Sbjct: 376 MKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNL 435

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
            V     +G  E A +L  + IE
Sbjct: 436 FVDISYGEGNMETALELCDEAIE 458



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 113/388 (29%), Positives = 202/388 (52%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD ++Y+ ++ G C  G+++  + L+ EM + G +P++ TYN+I+  +  +GK
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A    ++ + +G  P  + YT LI+  CK   I  A ++ D+M  +   PD + Y +
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++   C+ GK  +A  V N + SRG+EP+ +TY TL+      G  +    + + M ++ 
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +P V TY  L +GLCK G VD A    ++M  K  Q +I TYN+++  LCK G + +A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L+  +  +   P  IT+ TL+D   K G M KA  L  +M++ G+ P  IT   L+ GF
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C +  +E+   LL  + ++G     + Y  ++   C    +    ++ + M +    PD 
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             ++ ++K        +EA+ L +++ E
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAE 388



 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 206/421 (48%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M  R   PD      +I G      ++K  K++Q M M G  P+  TYN ++  LCK G+
Sbjct: 1   MKFRGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGK 60

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +  A  +L EM   G  PD + Y T++      G  + A   + +  ++   P  I YT 
Sbjct: 61  VDDAERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTA 120

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           +I  +C+   +  A +V + M   G  PD VTY +L++  CK G+ + A  + N ++  G
Sbjct: 121 VICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSG 180

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + PN +TY  L   L   G  D  +++L  M        + TYN L+NGLCK G + +A+
Sbjct: 181 LTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAV 240

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
               +M      PD +T+ T++ A CK G + +A +LL  +      P +IT+N L++G 
Sbjct: 241 KLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGF 300

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
              G +E    L   M+E GI P+  T+ +L+  +C  + +    ++ K +  RG    +
Sbjct: 301 CMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDS 360

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           + Y ++I G CK++ +  A  + + M    +    + +++I+K         EA +L+++
Sbjct: 361 NTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIKGFFKKKKISEARELFEE 420

Query: 563 L 563
           +
Sbjct: 421 M 421



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 90/324 (27%), Positives = 169/324 (52%)

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           +G  P +++Y+ +I   C    + + ++++ +M ++G  P++ TYNS++   CK GK DD
Sbjct: 4   RGDAPDVVSYSTVINGYCLGGELQKVLKLIQEMQMKGLKPNLYTYNSIILLLCKSGKVDD 63

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  V+  ++++G+ P+++ Y TL+      G   A  K+ D M +    P    Y  +I 
Sbjct: 64  AERVLREMINQGIVPDTVVYTTLIDGFCKLGNIQAAYKLFDEMEKQRIVPDFIAYTAVIC 123

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GLC+ G +  A   FN+M S+  +PD VTY T++   CK G + +A  L + +  S  +P
Sbjct: 124 GLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTP 183

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            ++TY  L DGL K G ++ A  L  +M   G+  +  T+ +L+ G C++  + +AV L+
Sbjct: 184 NVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLM 243

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +E+   G       +  ++   CK+ ++  A ++L  M+    +P    F+ ++      
Sbjct: 244 EEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMS 303

Query: 551 GMTEEAYKLWQKLIEWKVFEKGTT 574
           GM E+  +L   ++E  +    TT
Sbjct: 304 GMLEDGERLLAWMLEKGIMPNTTT 327



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/356 (29%), Positives = 170/356 (47%), Gaps = 10/356 (2%)

Query: 116 DEKTNNKILQNF----------CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRI 165
           DE    +I+ +F          C  GK+ +A K+ + M  R   PD      LI G  + 
Sbjct: 104 DEMEKQRIVPDFIAYTAVICGLCRCGKMMEADKVFNKMFSRGVEPDEVTYTTLIDGYCKS 163

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
             +EKA  +   MV SG  P+ +TY  +  GLCK GQ+ +A  LL EM   G + ++ TY
Sbjct: 164 GEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTANELLHEMCGKGLQLNICTY 223

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N+++  +  +G  +QA+   ++    G  P  IT+T L++  CK   + +A E+L +M  
Sbjct: 224 NSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAYCKTGEMVKAHELLREMLD 283

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
            G  P ++T+N L+N  C  G  +D   ++  +L +G+ PN+ TYN+L+     R     
Sbjct: 284 RGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNTTTYNSLMKQYCIRNNMRC 343

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             +I   M      P   TYNILI G CK   +  A     +M  K       +YN+++ 
Sbjct: 344 TTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKEMAEKGFNLTASSYNSIIK 403

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
              K+  ++EA +L   +     +     YN  +D    +G ME A+ L  + +EN
Sbjct: 404 GFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGNMETALELCDEAIEN 459



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 86/307 (28%), Positives = 142/307 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE DE T   ++  +C  G++  A  L + M +    P+      L  GL ++ +++ A+
Sbjct: 146 VEPDEVTYTTLIDGYCKSGEMEKAFSLHNQMVQSGLTPNVVTYTALADGLCKLGQVDTAN 205

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M   G   +  TYN +V GLCK G IR A+ L++EM V+G  PD IT+ T++   
Sbjct: 206 ELLHEMCGKGLQLNICTYNSLVNGLCKSGNIRQAVKLMEEMEVAGMYPDTITFTTLMDAY 265

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  +A    ++ L +G  P +IT+ +L+   C    +     +L  M  +G  P+ 
Sbjct: 266 CKTGEMVKAHELLREMLDRGLQPTVITFNVLMNGFCMSGMLEDGERLLAWMLEKGIMPNT 325

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYNSL+   C +        +   + +RG+ P+S TYN L+              +   
Sbjct: 326 TTYNSLMKQYCIRNNMRCTTEIYKGMCARGVMPDSNTYNILIKGHCKARNMKEAWFLHKE 385

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E   + T  +YN +I G  K   +  A   F +M  +    D   YN  +     EG 
Sbjct: 386 MAEKGFNLTASSYNSIIKGFFKKKKISEARELFEEMRREGMAADAEIYNLFVDISYGEGN 445

Query: 413 LNEALQL 419
           +  AL+L
Sbjct: 446 METALEL 452


>gi|15221671|ref|NP_176495.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75169919|sp|Q9CAN6.1|PPR97_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g63070, mitochondrial; Flags: Precursor
 gi|12323265|gb|AAG51617.1|AC010795_21 unknown protein; 38394-36551 [Arabidopsis thaliana]
 gi|332195929|gb|AEE34050.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 590

 Score =  208 bits (529), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 225/448 (50%), Gaps = 5/448 (1%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E  + K+LQ+     KL DA  L   M +    P       L+  + ++++ +    + +
Sbjct: 44  ENLSRKVLQDL----KLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGE 99

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M   G   +  TY++ +   C+R Q+  A+A+L +M   G  P ++T N++L       
Sbjct: 100 QMQNLGISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGN 159

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +  +A+      +  G  P  +T+T L+  + +    + A+ +++ M ++GC PD+VTY 
Sbjct: 160 RISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYG 219

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +++N  CK+G+ D A+ ++N +    +E + + YNT++  L      D    + + M   
Sbjct: 220 AVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETK 279

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P VFTYN LI+ LC YG    A    + M+ KN  PD+V +N ++ A  KEG L EA
Sbjct: 280 GIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEA 339

Query: 417 LQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            +L   ++    C P ++ YNTLI G  K   +E+ M ++ +M + G+  + +T+ TLI 
Sbjct: 340 EKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIH 399

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GF +A   + A  + K++   G       Y +++ GLC +  V+ A+ V E M     K 
Sbjct: 400 GFFQARDCDNAQMVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKL 459

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D   ++T+++ +   G  E+ + L+  L
Sbjct: 460 DIVTYTTMIEALCKAGKVEDGWDLFCSL 487



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 127/431 (29%), Positives = 213/431 (49%), Gaps = 38/431 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L  FC   ++++A  L+D M      PD      L+ GL + ++  +A  +++ M
Sbjct: 147 TLNSLLNGFCHGNRISEAVALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERM 206

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQ-----------------------------------I 203
           V+ G  PD +TY  ++ GLCKRG+                                   +
Sbjct: 207 VVKGCQPDLVTYGAVINGLCKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHM 266

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A  L ++M   G +PDV TYN ++  + + G++  A     D L K   P L+ +  L
Sbjct: 267 DDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNAL 326

Query: 264 IEQVCKQCGIARAIEVLDDMA-IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           I+   K+  +  A ++ D+M   + C PD+V YN+L+   CK  + ++ + V   +  RG
Sbjct: 327 IDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRG 386

Query: 323 MEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           +  N++TY TL+H    +R C +A      ++++  H P + TYNIL++GLC  G V+ A
Sbjct: 387 LVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVH-PDIMTYNILLDGLCNNGNVETA 445

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +  F  M  ++ + DIVTY T++ ALCK G + +   L   L+     P ++TY T++ G
Sbjct: 446 LVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSG 505

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             +KG  E+A  L+ +M E+G  P+  T+ TLI    R      + +L+KE+   G    
Sbjct: 506 FCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDGDEAASAELIKEMRSCGFAGD 565

Query: 502 NSAYRLVIHGL 512
            S + LV + L
Sbjct: 566 ASTFGLVTNML 576



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 220/446 (49%), Gaps = 1/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T +  +  FC R +L+ A  ++  M +    P      +L+ G    +RI +A  ++  M
Sbjct: 112 TYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQM 171

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  PDT+T+  +V GL +  +   A+AL++ M V GC+PD++TY  ++  +   G+ 
Sbjct: 172 VEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEP 231

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+       +      ++ Y  +I+ +CK   +  A ++ + M  +G  PD+ TYN L
Sbjct: 232 DLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPL 291

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  G++ DA  +++++L + + P+ + +N L+ +    G     +K+ D M ++ H
Sbjct: 292 ISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKH 351

Query: 359 S-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V  YN LI G CKY  V+  +  F +M  +    + VTY T++    +    + A 
Sbjct: 352 CFPDVVAYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQ 411

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +   +      P ++TYN L+DGL   G +E A+V++  M +  +  D +T+ T+I   
Sbjct: 412 MVFKQMVSDGVHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEAL 471

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+A +VE+  DL   +  +G K     Y  ++ G C+    + A  +   M      P+ 
Sbjct: 472 CKAGKVEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNS 531

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
             ++T+++    DG    + +L +++
Sbjct: 532 GTYNTLIRARLRDGDEAASAELIKEM 557



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 82/305 (26%), Positives = 147/305 (48%)

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L  +V +   +  AI +  DM      P IV ++ L++   K  K+D  + +   + + G
Sbjct: 46  LSRKVLQDLKLDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLG 105

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +  N  TY+  ++    R        IL  M +  + P++ T N L+NG C    +  A+
Sbjct: 106 ISHNLYTYSIFINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAV 165

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
              +QMV    QPD VT+ T++  L +    +EA+ L+  +    C P L+TY  +I+GL
Sbjct: 166 ALVDQMVEMGYQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGL 225

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+G  + A+ L  +M +  I  D + + T+I G C+   +++A DL  ++  +G K   
Sbjct: 226 CKRGEPDLALNLLNKMEKGKIEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDV 285

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +I  LC   +   A ++L  M+     PD   F+ ++     +G   EA KL+ +
Sbjct: 286 FTYNPLISCLCNYGRWSDASRLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDE 345

Query: 563 LIEWK 567
           +++ K
Sbjct: 346 MVKSK 350



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 92/343 (26%), Positives = 159/343 (46%), Gaps = 7/343 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    N I+   C    + DA  L + M  +   PD      LI  L    R   AS
Sbjct: 246 IEADVVIYNTIIDGLCKYKHMDDAFDLFNKMETKGIKPDVFTYNPLISCLCNYGRWSDAS 305

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRT 231
           ++L  M+     PD + +N ++    K G++  A  L DEM  S  C PDV+ YNT+++ 
Sbjct: 306 RLLSDMLEKNINPDLVFFNALIDAFVKEGKLVEAEKLYDEMVKSKHCFPDVVAYNTLIKG 365

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
                + ++ +  +++  ++G     +TYT LI    +      A  V   M  +G  PD
Sbjct: 366 FCKYKRVEEGMEVFREMSQRGLVGNTVTYTTLIHGFFQARDCDNAQMVFKQMVSDGVHPD 425

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           I+TYN L++  C  G  + A++V   +  R M+ + +TY T++ +L   G  +    +  
Sbjct: 426 IMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGKVEDGWDLFC 485

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            ++     P V TY  +++G C+ GL + A   F +M      P+  TYNT++ A  ++G
Sbjct: 486 SLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNTLIRARLRDG 545

Query: 412 MLNEALQLLHLLN-----GSSCSPCLITYNTLIDGLAKKGCME 449
               + +L+  +      G + +  L+T N L DG   K  ++
Sbjct: 546 DEAASAELIKEMRSCGFAGDASTFGLVT-NMLHDGRLDKSFLD 587



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 93/191 (48%)

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +D AI  F  MV     P IV ++ +L A+ K    +  + L   +     S  L TY+ 
Sbjct: 56  LDDAIGLFGDMVKSRPFPSIVEFSKLLSAIAKMNKFDLVISLGEQMQNLGISHNLYTYSI 115

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
            I+   ++  +  A+ + G+MM+ G  P  +T  +L+ GFC  +++ EAV L+ ++ + G
Sbjct: 116 FINYFCRRSQLSLALAILGKMMKLGYGPSIVTLNSLLNGFCHGNRISEAVALVDQMVEMG 175

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            +     +  ++HGL +  K   A+ ++E M+    +PD   +  ++  +   G  + A 
Sbjct: 176 YQPDTVTFTTLVHGLFQHNKASEAVALVERMVVKGCQPDLVTYGAVINGLCKRGEPDLAL 235

Query: 558 KLWQKLIEWKV 568
            L  K+ + K+
Sbjct: 236 NLLNKMEKGKI 246



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/129 (29%), Positives = 61/129 (47%), Gaps = 2/129 (1%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  V  D  T N +L   C+ G +  A  + + M +R+   D      +I  L +  +
Sbjct: 419 SDG--VHPDIMTYNILLDGLCNNGNVETALVVFEYMQKRDMKLDIVTYTTMIEALCKAGK 476

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +E    +   + + G  P+ +TY  M+ G C++G    A AL  EM   G  P+  TYNT
Sbjct: 477 VEDGWDLFCSLSLKGVKPNVVTYTTMMSGFCRKGLKEEADALFVEMKEDGPLPNSGTYNT 536

Query: 228 ILRTMFDNG 236
           ++R    +G
Sbjct: 537 LIRARLRDG 545


>gi|449446442|ref|XP_004140980.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 132/453 (29%), Positives = 219/453 (48%), Gaps = 18/453 (3%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  GK   A K+I  M     +PD      +I  L    R+E A  + + M  +G VPD 
Sbjct: 465 CGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDV 524

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            TY +++    K G I+ A   LDEM   GCEP V+TY T++       K   A   ++ 
Sbjct: 525 YTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 584

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI--------------- 292
            + KGC P +ITYT LI+  CK   I +A ++   M  +   PD+               
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPN 644

Query: 293 -VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            VTY +LV+  CK  K  DA  ++  +   G EPN+I Y+ L+         D   ++  
Sbjct: 645 VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH 704

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M E  ++P V+TY+ LI+ L K   +D  +   ++M+  +C P+IV Y  ++  L K  
Sbjct: 705 KMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVA 764

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             +EA +L+ ++    C P ++TY  +IDG  K G ++K + L+ +M   G +P+ +T+ 
Sbjct: 765 KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYT 824

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            LI   C    ++EA  LL+E+ +       S+Y  VI G    ++  +++ +LE +  +
Sbjct: 825 VLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGY--KREFILSLGLLEEVEKN 882

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              P   ++  ++      G  E A +L +++I
Sbjct: 883 GSAPIILLYKVLIDNFVKAGRLEVALELHKEVI 915



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 219/433 (50%), Gaps = 28/433 (6%)

Query: 121 NKILQNFCSRGKLTD------ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           N ++ + CS G+L        A K  + M     + +    ++  R L    + EKA KV
Sbjct: 417 NILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 476

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           +  M+ +G VPDT TY+ ++G LC   ++ +A  L  EM  +G  PDV TY  ++     
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSK 536

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G  KQA  +  + +R GC P ++TYT LI    K   ++ A E+ + M  +GC P+++T
Sbjct: 537 AGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVIT 596

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRG------------------MEPNSITYNTLLHS 336
           Y +L++  CK G  + A  +   +  RG                   +PN +TY  L+  
Sbjct: 597 YTALIDGYCKSGNIEKACQIYARM--RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDG 654

Query: 337 L-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           L  +    DA D +L+ M      P    Y+ LI+G CK   +D A   F++MV     P
Sbjct: 655 LCKAHKVKDARD-LLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVEHGYNP 713

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           ++ TY++++  L K+  L+  L++L  +  +SC+P ++ Y  +IDGL+K    ++A  L 
Sbjct: 714 NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLM 773

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M E G  P+ +T+  +I GF +A +V++ ++L +E+G +G       Y ++I+  C +
Sbjct: 774 LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCAT 833

Query: 516 KKVDMAIQVLELM 528
             +D A  +LE M
Sbjct: 834 GHLDEAYALLEEM 846



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 218/472 (46%), Gaps = 25/472 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T     Q  C  GK  +A  LI+   + + +P+      +I GL      E+A   L
Sbjct: 275 DEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFL 331

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +  +P+  TY +++ G   + Q+     +L  M   GC P    +N+++     +
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS 391

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK------QCGIARAIEVLDDMAIEGCS 289
             F  A    K   +  C P  + Y ILI  +C             A +  ++M   G  
Sbjct: 392 DDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTV 451

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            + V   S     C  GK++ A  VI+ ++  G  P++ TY+ ++  L +    +    +
Sbjct: 452 LNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M      P V+TY ILI+   K G++ +A N  ++MV   C+P +VTY T++ A  K
Sbjct: 512 FKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK 571

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM----------- 458
              ++ A +L  L+    C P +ITY  LIDG  K G +EKA  +Y +M           
Sbjct: 572 AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDM 631

Query: 459 ---MENGIS--PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
              ++N ++  P+ +T+  L+ G C+A +V++A DLL+ +   G +     Y  +I G C
Sbjct: 632 YFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K+ K+D A +V   M+   Y P+   +S+++ ++  D   +   K+  K++E
Sbjct: 692 KAAKLDEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 123/477 (25%), Positives = 212/477 (44%), Gaps = 20/477 (4%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  V  D  T   ++  F   G +  A   +D M R    P       LI   ++  ++ 
Sbjct: 517 GTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVS 576

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD-------- 221
            A+++ ++M+  G  P+ ITY  ++ G CK G I  A  +   M      PD        
Sbjct: 577 VANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIK 636

Query: 222 --------VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
                   V+TY  ++  +    K K A    +     GC P  I Y  LI+  CK   +
Sbjct: 637 NNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKL 696

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A EV   M   G +P++ TY+SL++   K  + D  + V++ +L     PN + Y  +
Sbjct: 697 DEAQEVFHKMVEHGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEM 756

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L      D   K++ +M E    P V TY  +I+G  K G VD+ +  F +M SK C
Sbjct: 757 IDGLSKVAKTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGC 816

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P+ VTY  ++   C  G L+EA  LL  +  +     + +Y  +I+G  ++  +  ++ 
Sbjct: 817 APNFVTYTVLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFIL--SLG 874

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM--RNSAYRLVIHG 511
           L  ++ +NG +P  + ++ LI  F +A ++E A++L KE+      M  + + Y  +I+ 
Sbjct: 875 LLEEVEKNGSAPIILLYKVLIDNFVKAGRLEVALELHKEVISASMSMAAKKNLYTSLIYS 934

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              + K+  A ++   MI     PD   F  ++  +      EEA +L   L +  +
Sbjct: 935 FSYASKIGHAFELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 179/398 (44%), Gaps = 9/398 (2%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L++  +R D+++ A  V + M   G   D  T       LCK G+ R A++L+++     
Sbjct: 247 LVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFV- 305

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P+ I YN ++  + +   F++A+ F        C P + TY IL+     +  + R  
Sbjct: 306 --PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCK 363

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L  M  EGC P    +NSLV+  CK   +  A  ++  +     +P  + YN L+ S+
Sbjct: 364 RILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSI 423

Query: 338 GSRG------CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            S G       ++  +K  + M  A               LC +G  ++A    ++M+  
Sbjct: 424 CSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGN 483

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              PD  TY+ V+G LC    +  A  L   + G+   P + TY  LID  +K G +++A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
                +M+ +G  P  +T+ TLI  + +A +V  A +L + +  +G       Y  +I G
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            CKS  ++ A Q+   M      PD  ++  I   VA+
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE 641



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 180/388 (46%), Gaps = 9/388 (2%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P  +TYN +V    +  ++ +A  +  EMS  G   D  T     + +   GK+++A
Sbjct: 236 GYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA 295

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   +   ++   P  I Y  +I  +C+      A++ L+ M    C P++ TY  L+  
Sbjct: 296 LSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG 352

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
              + +      +++ +++ G  P+   +N+L+H+      +    K+L  M +    P 
Sbjct: 353 CLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPG 412

Query: 362 VFTYNILINGLCKYG------LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              YNILI  +C  G        + A  ++N+M+S     + V   +    LC  G   +
Sbjct: 413 YVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEK 472

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +++H + G+   P   TY+ +I  L     +E A  L+ +M   G+ PD  T+  LI 
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            F +A  +++A + L E+ + G +     Y  +IH   K+KKV +A ++ ELMI+    P
Sbjct: 533 CFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +   ++ ++      G  E+A +++ ++
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARM 620



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 50/246 (20%)

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI-VTYNTVLGALCKEGMLNEA 416
           H+P V+   I +  + + G  DR    F + +  + +  +    N ++   C+ G+ N A
Sbjct: 169 HTPAVY---IALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVA 225

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS------------ 464
           L+ L  L      P  +TYN L+    +   ++ A +++ +M E G+S            
Sbjct: 226 LEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQA 285

Query: 465 --------------------PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
                               P+ I +  +I G C A   EEA+D L       N+MR+++
Sbjct: 286 LCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFL-------NRMRSTS 338

Query: 505 -------YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  YR+++ G    K++    ++L +MI+    P  T+F+++V           AY
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398

Query: 558 KLWQKL 563
           KL +K+
Sbjct: 399 KLLKKM 404


>gi|22296415|dbj|BAC10183.1| pentatricopeptide repeat protein-like [Oryza sativa Japonica Group]
          Length = 624

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 207/454 (45%), Gaps = 74/454 (16%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS---GCEPDVITYNTILRTMFDNGKFKQ 240
           V D ++YN ++  LC+RG    A ALL  MS+     C P+ ++Y  ++R +  +    Q
Sbjct: 74  VRDAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQ 133

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+G  +     G    ++TY  LI  +C    + +A+E++ +M   G  P++V Y+SL+ 
Sbjct: 134 AVGLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQ 193

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+++D   V   +  +G+EP+ + Y  L+ SL   G       ++D+M      P
Sbjct: 194 GYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEP 253

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT------------------ 402
            V TYN+LIN +CK G V  AI    +M  K   PD+VTYNT                  
Sbjct: 254 NVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLL 313

Query: 403 -------------------VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
                              V+  LC  G + +A Q+  ++  + C   L+TYN LI GL 
Sbjct: 314 EEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLL 373

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG------ 497
           +   + KAM L  +M   G+ PD  T+  LI GFC+  QV+ A DLL  +  RG      
Sbjct: 374 RVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELF 433

Query: 498 ----------------------NKMRNS------AYRLVIHGLCKSKKVDMAIQVLELMI 529
                                 N+M N+      AY  +IHG CK+  +  A ++L+ ++
Sbjct: 434 HYIPLLVAMCEQGMMERARNLFNEMDNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIV 493

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                PD   +S ++   A  G  E A  + +++
Sbjct: 494 DEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQM 527



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/411 (30%), Positives = 219/411 (53%), Gaps = 5/411 (1%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
            LIRGL     ++KA +++  M  SG  P+ + Y+ ++ G CK G+      +  EMS  
Sbjct: 155 TLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVGKVFVEMSEK 214

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G EPDV+ Y  ++ ++   GK K+A G     +R+G  P ++TY +LI  +CK+  +  A
Sbjct: 215 GIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCMCKEGSVKEA 274

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG---MEPNSITYNTL 333
           I VL  M+ +G +PD+VTYN+L+       + D+A+ ++  ++ RG   ++PN +T+N++
Sbjct: 275 IGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEMV-RGKNIVKPNVVTFNSV 333

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L   G      ++  +M E      + TYN+LI GL +   V +A+   ++M S   
Sbjct: 334 IQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMELMDEMTSLGL 393

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
           +PD  TY+ ++   CK   ++ A  LL  +      P L  Y  L+  + ++G ME+A  
Sbjct: 394 EPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCEQGMMERARN 453

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L+ +M +N    D + + T+I G C+A  ++ A +LLK I   G       Y +VI+   
Sbjct: 454 LFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAVTYSIVINMFA 512

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           KS  ++ A  VL+ M +S + PD  VF ++++  +  G   +  +L +++I
Sbjct: 513 KSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREMI 563



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 202/375 (53%), Gaps = 3/375 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + +LQ +C  G+  D  K+   M+ +   PD      LI  L ++ + +KA  V+ +MV 
Sbjct: 189 SSLLQGYCKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVR 248

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +TYN+++  +CK G ++ AI +L +MS  G  PDV+TYNT+++ + D  +  +
Sbjct: 249 RGLEPNVVTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDE 308

Query: 241 AIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           A+   ++ +R      P ++T+  +I+ +C    + +A +V   M   GC  ++VTYN L
Sbjct: 309 AMWLLEEMVRGKNIVKPNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLL 368

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    +  K   A+ +++ + S G+EP+S TY+ L+         D  + +L  M +   
Sbjct: 369 IGGLLRVHKVRKAMELMDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGI 428

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +F Y  L+  +C+ G+++RA N FN+M   N   D+V Y+T++   CK G L  A +
Sbjct: 429 EPELFHYIPLLVAMCEQGMMERARNLFNEM-DNNFPLDVVAYSTMIHGACKAGDLKTAKE 487

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +     +P  +TY+ +I+  AK G ME A  +  QM  +G  PD     +LI G+ 
Sbjct: 488 LLKSIVDEGLTPDAVTYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYS 547

Query: 479 RADQVEEAVDLLKEI 493
              ++ + ++L++E+
Sbjct: 548 TKGEINKVLELIREM 562



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 124/458 (27%), Positives = 223/458 (48%), Gaps = 10/458 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   +++  C   ++  A +L+  M      P+     +L++G  +  R E   
Sbjct: 146 VRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGYCKSGRWEDVG 205

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KV   M   G  PD + Y  ++  LCK G+ + A  ++D M   G EP+V+TYN ++  M
Sbjct: 206 KVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNVVTYNVLINCM 265

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG---CS 289
              G  K+AIG  K    KG  P ++TY  LI+ +     +  A+ +L++M + G     
Sbjct: 266 CKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEEM-VRGKNIVK 324

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++VT+NS++   C  G+   A  V   +   G   N +TYN L+  L          ++
Sbjct: 325 PNVVTFNSVIQGLCDIGRMRQAFQVRAMMEETGCMVNLVTYNLLIGGLLRVHKVRKAMEL 384

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           +D M      P  FTY+ILI G CK   VDRA +  + M  +  +P++  Y  +L A+C+
Sbjct: 385 MDEMTSLGLEPDSFTYSILIKGFCKMWQVDRAEDLLSTMRDRGIEPELFHYIPLLVAMCE 444

Query: 410 EGMLNEALQLLHLLNGSSCSPC-LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           +GM+  A  L + ++ +   P  ++ Y+T+I G  K G ++ A  L   +++ G++PD +
Sbjct: 445 QGMMERARNLFNEMDNN--FPLDVVAYSTMIHGACKAGDLKTAKELLKSIVDEGLTPDAV 502

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  +I  F ++  +E A  +LK++   G     + +  +I G     +++  ++++  M
Sbjct: 503 TYSIVINMFAKSGDMEAANGVLKQMTASGFLPDVAVFDSLIQGYSTKGEINKVLELIREM 562

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           I+     D  + ST+   +     + E   L Q L ++
Sbjct: 563 ITKNIALDSKIISTLSTSLV---ASNEGKALLQSLPDF 597



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 69/245 (28%), Positives = 128/245 (52%), Gaps = 3/245 (1%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAI 382
           ++++YNT+L +L  RG  D    +L  M+   H    P   +Y +L+  LC   L D+A+
Sbjct: 76  DAVSYNTVLTALCRRGHHDRAGALLRAMSLEPHPACRPNAVSYTVLMRALCADRLADQAV 135

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                M S   + D+VTY T++  LC    +++A++L+  +  S   P ++ Y++L+ G 
Sbjct: 136 GLLRSMRSAGVRADVVTYGTLIRGLCDAAEVDKAVELMGEMCESGIEPNVVVYSSLLQGY 195

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K G  E    ++ +M E GI PD + +  LI   C+  + ++A  ++  + +RG +   
Sbjct: 196 CKSGRWEDVGKVFVEMSEKGIEPDVVMYTGLIDSLCKVGKAKKAHGVMDMMVRRGLEPNV 255

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y ++I+ +CK   V  AI VL+ M      PD   ++T++K ++D    +EA  L ++
Sbjct: 256 VTYNVLINCMCKEGSVKEAIGVLKKMSEKGVAPDVVTYNTLIKGLSDVLEMDEAMWLLEE 315

Query: 563 LIEWK 567
           ++  K
Sbjct: 316 MVRGK 320


>gi|218191892|gb|EEC74319.1| hypothetical protein OsI_09597 [Oryza sativa Indica Group]
          Length = 1167

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 223/446 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +   G++ DA++++ +M  R   P    C  L++ L+R D +    KV + MV +G
Sbjct: 53  LVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRADAMALLWKVREFMVGAG 112

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY+ ++   CK  +  +A  +L EM   GC  + +TYN ++  +  +G  ++A 
Sbjct: 113 ISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAF 172

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           GF KD    G  P   TY  LI  +CK      A  +LD+M+     P++V Y +L++  
Sbjct: 173 GFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGF 232

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            ++G  D+A  +I  +++ G++PN ITY+ L+  L   G  D    +L  M   SH P  
Sbjct: 233 MREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDT 292

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN++I G  ++     A    ++M +    P++ TY+ ++  LC+ G   +A  LL  
Sbjct: 293 ITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEE 352

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P    Y  LI G  ++G +  A  ++ +M +  + PD   + +LI+G  +  +
Sbjct: 353 MTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGR 412

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEE+     ++ +RG       Y  +IHG  K+  ++ A Q+++ M+ +  KP+D ++  
Sbjct: 413 VEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYID 472

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           +++        E+    ++ +++  V
Sbjct: 473 LLESYFKSDDIEKVSSTFKSMLDQGV 498



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/455 (27%), Positives = 221/455 (48%), Gaps = 2/455 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASK-LIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           G  +  D  T + +++ +C   +   A K L+++  R   +    + + LI GL R   +
Sbjct: 110 GAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNV-LIAGLCRSGAV 168

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E+A    + M   G VPD  TY  ++ GLCK  +   A ALLDEMS +  +P+V+ Y  +
Sbjct: 169 EEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANL 228

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G   +A    K+ +  G  P  ITY  L+  +CK   + RA  +L  M  +  
Sbjct: 229 IDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSH 288

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD +TYN ++    +     DA  +++ + + G+ PN  TY+ ++H L   G  +    
Sbjct: 289 RPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASD 348

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L+ M      P  F Y  LI+G C+ G V  A   F++M   N  PD+  YN+++  L 
Sbjct: 349 LLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLS 408

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G + E+ +    +      P   TY+ LI G  K G +E A  L  +M++ G+ P+D+
Sbjct: 409 KVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDV 468

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            +  L+  + ++D +E+     K +  +G  + N  Y ++IH L  S  ++ A +VL  +
Sbjct: 469 IYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEI 528

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             +   PD  V+S+++  +      E+A+ +  ++
Sbjct: 529 EKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 563



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 230/511 (45%), Gaps = 71/511 (13%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   G   +A K+I  M      P+     NL+RGL ++ ++++AS +L+ MV   
Sbjct: 228 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 287

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PDTITYN+++ G  +    + A  LL EM  +G  P+V TY+ ++  +  +G+ ++A 
Sbjct: 288 HRPDTITYNLIIEGHFRHHNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 347

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV--- 299
              ++   KG  P    Y  LI   C++  ++ A E+ D M      PD+  YNSL+   
Sbjct: 348 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 407

Query: 300 ------------------------NFS--------CKQGKYDDAVLVINNLLSRGMEPNS 327
                                    F+         K G  + A  ++  +L  G++PN 
Sbjct: 408 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 467

Query: 328 ITY-----------------------------------NTLLHSLGSRGCWDAVDKILDI 352
           + Y                                     L+H+L S G  +A  ++L  
Sbjct: 468 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSE 527

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + +    P V  Y+ LI+GLCK    ++A    ++M  K   P+IV YN ++  LCK G 
Sbjct: 528 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 587

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ A  + + +      P  +TY +LIDG  K G +  A  LY +M+  GI+PD   +  
Sbjct: 588 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 647

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L  G   A  +E+A+ L++E+  RG+    S++  ++ G CK  K+   +++L +++   
Sbjct: 648 LTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 706

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             P+      I+  +++ G   E + ++ +L
Sbjct: 707 LVPNALTIENIISGLSEAGKLSEVHTIFVEL 737



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 207/449 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C   +  +A  L+D M+     P+     NLI G +R    ++A K++
Sbjct: 186 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 245

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV +G  P+ ITY+ +V GLCK GQ+  A  LL +M      PD ITYN I+   F +
Sbjct: 246 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 305

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              K A     +    G  P + TY+I+I  +C+     +A ++L++M  +G  P+   Y
Sbjct: 306 HNKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 365

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L++  C++G    A  + + +    + P+   YN+L+  L   G  +   K    M E
Sbjct: 366 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 425

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P  FTY+ LI+G  K G ++ A     +M+    +P+ V Y  +L +  K   + +
Sbjct: 426 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 485

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
                  +           Y  LI  L+  G ME A  +  ++ +NG  PD   + +LI 
Sbjct: 486 VSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLIS 545

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+    E+A  +L E+ K+G       Y  +I GLCKS  +  A  V   +++    P
Sbjct: 546 GLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVP 605

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +   +++++      G    A+ L+ +++
Sbjct: 606 NCVTYTSLIDGSCKVGDISNAFYLYNEML 634



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 209/460 (45%), Gaps = 56/460 (12%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C  G ++ A ++ D M + N +PD +   +LI GL ++ R+E+++K    M   G
Sbjct: 368 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 427

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +P+  TY+ ++ G  K G + SA  L+  M  +G +P+ + Y  +L + F +   ++  
Sbjct: 428 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 487

Query: 243 GFWKDQL-----------------------------------RKGCPPYLITYTILIEQV 267
             +K  L                                   + G  P +  Y+ LI  +
Sbjct: 488 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSEIEKNGSVPDVHVYSSLISGL 547

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CK     +A  +LD+M+ +G  P+IV YN+L++  CK G    A  V N++L++G+ PN 
Sbjct: 548 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 607

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +TY +L+      G       + + M     +P  F Y++L  G    G +++A+    +
Sbjct: 608 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 667

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M  +     I ++N ++   CK G + E L+LLH++ G    P  +T   +I GL++ G 
Sbjct: 668 MFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 726

Query: 448 MEKAMV-------------------LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           + +                      L+  M+  G  P D+    +I   C+   +++A+ 
Sbjct: 727 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVD-DMIRDHCKEGNLDKALM 785

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           L   I  +   M  S+Y  ++  LC+  K+  A+ +L+ M
Sbjct: 786 LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 825



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 58/217 (26%), Positives = 107/217 (49%), Gaps = 3/217 (1%)

Query: 353 MNEASH-SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           ++++ H SP V   ++L++   K G V  A      M  +   P I   N +L  L +  
Sbjct: 39  LSDSGHRSPAVL--DVLVDTYKKSGRVQDAAEVVLMMRDRGLAPSIRCCNALLKDLLRAD 96

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +    ++   + G+  SP + TY+TLI+   K    + A  +  +M E G   + +T+ 
Sbjct: 97  AMALLWKVREFMVGAGISPDVYTYSTLIEAYCKVREFDTAKKVLVEMRERGCGLNTVTYN 156

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            LI G CR+  VEEA    K++   G       Y  +I+GLCKS++ + A  +L+ M  +
Sbjct: 157 VLIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCA 216

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             KP+  V++ ++     +G  +EA+K+ ++++   V
Sbjct: 217 ELKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGV 253


>gi|296086456|emb|CBI32045.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  208 bits (529), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 128/428 (29%), Positives = 209/428 (48%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           KLI+ M  +   P+ +    +I  L +  ++ +A +VL+ M+  G  PD + Y  ++ G 
Sbjct: 209 KLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGF 268

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           CK G + SA  L DEM      PD ITY  ++  +   G+  +A   + + + K   P  
Sbjct: 269 CKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDE 328

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +TYT LI+  CK+  +  A  + + M   G +P+IVTY +L +  CK G+ D A  +++ 
Sbjct: 329 VTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHE 388

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +  +G+E N  TYN+L++ L   G  D   K++  M  A   P   TY  L++  CK   
Sbjct: 389 MCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSRE 448

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           + RA     QM+ +  QP +VT+N ++   C  GML +  +LL  +      P   TYN+
Sbjct: 449 MVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNS 508

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI     +  M     +Y  M   G+ PD  T+  LI G C+A  ++EA  L +++  +G
Sbjct: 509 LIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKG 568

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
             +  S+Y  +I G  K KK   A ++ E M       D  +++       D+G  E   
Sbjct: 569 FNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTL 628

Query: 558 KLWQKLIE 565
           +L  + IE
Sbjct: 629 ELCDEAIE 636



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 182/379 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK+ +A +++  M      PD      LI G  ++  +  A ++   M
Sbjct: 225 TYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEM 284

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 PD ITY  ++ GLC+ G++  A  L  EM     EPD +TY  ++      GK 
Sbjct: 285 QKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKM 344

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A       L+ G  P ++TYT L + +CK   +  A E+L +M  +G   +I TYNSL
Sbjct: 345 KEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSL 404

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  CK G  D AV ++ ++   G  P+++TY TL+ +           ++L  M +   
Sbjct: 405 VNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDREL 464

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            PTV T+N+L+NG C  G+++        M+ K   P+  TYN+++   C    +    +
Sbjct: 465 QPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTE 524

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +      P   TYN LI G  K   M++A  L+  M+  G +    ++  LI GF 
Sbjct: 525 IYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFY 584

Query: 479 RADQVEEAVDLLKEIGKRG 497
           +  +  EA +L +++ + G
Sbjct: 585 KRKKFLEARELFEQMRREG 603



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 101/344 (29%), Positives = 167/344 (48%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC  G ++ A +L D M +R   PDF     +I GL +  R+ +A K+   MV   
Sbjct: 264 LIDGFCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKR 323

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TY  ++ G CK G+++ A +L ++M   G  P+++TY  +   +   G+   A 
Sbjct: 324 LEPDEVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTAN 383

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               +  RKG    + TY  L+  +CK   I +A++++ DM + G  PD VTY +L++  
Sbjct: 384 ELLHEMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAY 443

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK  +   A  ++  +L R ++P  +T+N L++     G  +  +K+L  M E    P  
Sbjct: 444 CKSREMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNA 503

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN LI   C    +      +  M +K   PD  TYN ++   CK   + EA  L   
Sbjct: 504 TTYNSLIKQYCIRNNMRATTEIYRGMCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRD 563

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           + G   +  + +YN LI G  K+    +A  L+ QM   G+  D
Sbjct: 564 MVGKGFNLTVSSYNALIKGFYKRKKFLEARELFEQMRREGLVAD 607



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 214/450 (47%), Gaps = 19/450 (4%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           L+  C   ++  ASK  D+   R  I DF    NL  G      +  A K+   M+  G 
Sbjct: 126 LEARCIVAQIATASK--DLKMARKLIQDFWVNPNLDVG------VSFARKLFDKMLNYGL 177

Query: 184 VPDTITYNMMVGGLCK---------RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           +    + N+ +  L +         +G+    + L++EM + G +P+  TYN ++  +  
Sbjct: 178 LISVDSCNLFISHLSEDLDGIKIALKGEW--VLKLIEEMQIKGLKPNPYTYNGVILLLCK 235

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK  +A    ++ + +G  P  + YT LI+  CK   ++ A  + D+M     SPD +T
Sbjct: 236 TGKVAEAERVLREMISEGIAPDGVIYTTLIDGFCKLGNVSSAYRLFDEMQKRKISPDFIT 295

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +++   C+ G+  +A  + + ++ + +EP+ +TY  L+      G       + + M 
Sbjct: 296 YTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAFSLHNQML 355

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +   +P + TY  L +GLCK G VD A    ++M  K  + +I TYN+++  LCK G ++
Sbjct: 356 QMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGLCKAGNID 415

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A++L+  +  +   P  +TY TL+D   K   M +A  L  QM++  + P  +T   L+
Sbjct: 416 QAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTVVTFNVLM 475

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            GFC +  +E+   LLK + ++G     + Y  +I   C    +    ++   M +    
Sbjct: 476 NGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRGMCAKGVV 535

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           PD   ++ ++K        +EA+ L + ++
Sbjct: 536 PDGNTYNILIKGHCKARNMKEAWFLHRDMV 565



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/298 (29%), Positives = 156/298 (52%)

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           ++++++M I+G  P+  TYN ++   CK GK  +A  V+  ++S G+ P+ + Y TL+  
Sbjct: 208 LKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTLIDG 267

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               G   +  ++ D M +   SP   TY  +I GLC+ G V  A   F++MV K  +PD
Sbjct: 268 FCKLGNVSSAYRLFDEMQKRKISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPD 327

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            VTY  ++   CKEG + EA  L + +     +P ++TY  L DGL K G ++ A  L  
Sbjct: 328 EVTYTALIDGYCKEGKMKEAFSLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLH 387

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M   G+  +  T+ +L+ G C+A  +++AV L+K++   G       Y  ++   CKS+
Sbjct: 388 EMCRKGLELNIYTYNSLVNGLCKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSR 447

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           ++  A ++L  M+    +P    F+ ++      GM E+  KL + ++E  +    TT
Sbjct: 448 EMVRAHELLRQMLDRELQPTVVTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATT 505



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 104/360 (28%), Positives = 161/360 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T   ++   C  G++ +A KL   M  +   PD      LI G  +  ++++A 
Sbjct: 289 ISPDFITYTAVICGLCQTGRVMEADKLFHEMVCKRLEPDEVTYTALIDGYCKEGKMKEAF 348

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M+  G  P+ +TY  +  GLCK G++ +A  LL EM   G E ++ TYN+++  +
Sbjct: 349 SLHNQMLQMGLTPNIVTYTALADGLCKCGEVDTANELLHEMCRKGLELNIYTYNSLVNGL 408

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   QA+   KD    G  P  +TYT L++  CK   + RA E+L  M      P +
Sbjct: 409 CKAGNIDQAVKLMKDMEVAGFHPDAVTYTTLMDAYCKSREMVRAHELLRQMLDRELQPTV 468

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VT+N L+N  C  G  +D   ++  +L +G+ PN+ TYN+L+     R    A  +I   
Sbjct: 469 VTFNVLMNGFCMSGMLEDGEKLLKWMLEKGIMPNATTYNSLIKQYCIRNNMRATTEIYRG 528

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P   TYNILI G CK   +  A      MV K     + +YN ++    K   
Sbjct: 529 MCAKGVVPDGNTYNILIKGHCKARNMKEAWFLHRDMVGKGFNLTVSSYNALIKGFYKRKK 588

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             EA +L   +           YN   D    +G ME  + L  + +E  +  D  T  T
Sbjct: 589 FLEARELFEQMRREGLVADREIYNIFADINYDEGKMELTLELCDEAIEKCLVGDIQTKNT 648



 Score = 43.9 bits (102), Expect = 0.25,   Method: Compositional matrix adjust.
 Identities = 27/85 (31%), Positives = 45/85 (52%)

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           E  + L++E+  +G K     Y  VI  LCK+ KV  A +VL  MIS    PD  +++T+
Sbjct: 205 EWVLKLIEEMQIKGLKPNPYTYNGVILLLCKTGKVAEAERVLREMISEGIAPDGVIYTTL 264

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKV 568
           +      G    AY+L+ ++ + K+
Sbjct: 265 IDGFCKLGNVSSAYRLFDEMQKRKI 289


>gi|356561679|ref|XP_003549107.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g12775, mitochondrial-like [Glycine max]
          Length = 750

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 216/444 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N IL +  +         L          PD      L+     +  I  A  VL  ++ 
Sbjct: 67  NYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILK 126

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ IT N ++ GLC RG+I+ A+   D++   G + + ++Y T++  +   G+ K 
Sbjct: 127 RGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKA 186

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                +        P ++ Y  +I  +CK   +  A ++  +M ++G SP++VTYN+LV 
Sbjct: 187 VARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVY 246

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G   +A  ++N +  + + P+  T+NTL+ +LG  G   A   +L +M +A   P
Sbjct: 247 GFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKP 306

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN LI+G      V  A   F  M      P++ TY T++  LCKE M++EA+ L 
Sbjct: 307 DVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLF 366

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +   +  P ++TY +LIDGL K   +E+A+ L  +M E GI PD  ++  L+   C+ 
Sbjct: 367 EEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKG 426

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++E A +  + +  +G  +    Y ++I+GLCK+     A+ +   M      PD   F
Sbjct: 427 GRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITF 486

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
            TI+  + +    ++A K+ +++I
Sbjct: 487 KTIICALFEKDENDKAEKILREMI 510



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 136/535 (25%), Positives = 249/535 (46%), Gaps = 72/535 (13%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           +G  V+ D    N I+ + C    L DA  L   M  +   P+      L+ G   +  +
Sbjct: 195 EGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIMGHL 254

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           ++A  +L  M +    PD  T+N ++  L K G++++A  +L  M  +  +PDV+TYN++
Sbjct: 255 KEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSL 314

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +   F   K K A   +    + G  P + TYT +I+ +CK+  +  A+ + ++M  +  
Sbjct: 315 IDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNM 374

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PDIVTY SL++  CK    + A+ +   +  +G++P+  +Y  LL +L   G  +   +
Sbjct: 375 IPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKE 434

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL- 407
               +    +   V TYN++INGLCK  L   A++  ++M  K C PD +T+ T++ AL 
Sbjct: 435 FFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALF 494

Query: 408 ----------------------CKEGMLNEALQLLHLLNGSSCSPCLITYNTL------- 438
                                  ++  L EA  +L ++  +   P ++TY TL       
Sbjct: 495 EKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLV 554

Query: 439 ----------------------------IDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
                                       IDGL KK  +++AM L+ +M    + P+ +T+
Sbjct: 555 NELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTY 614

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +LI   C+   +E A+ LLKE+ + G +    +Y +++ GLCKS +++ A ++ + ++ 
Sbjct: 615 TSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLV 674

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL--------------IEWKVFEK 571
             Y  +  V++ ++ ++   G+ +EA  L  K+              I W +FEK
Sbjct: 675 KGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEK 729



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 121/469 (25%), Positives = 226/469 (48%), Gaps = 23/469 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++      GK+  A  ++ +M +    PD     +LI G   +++++ A  V   M
Sbjct: 275 TFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSM 334

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG  P+  TY  M+ GLCK   +  A++L +EM      PD++TY +++  +  N   
Sbjct: 335 AQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHL 394

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++AI   K    +G  P + +YTIL++ +CK   +  A E    + ++G   ++ TYN +
Sbjct: 395 ERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVM 454

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL-------- 350
           +N  CK   + +A+ + + +  +G  P++IT+ T++ +L  +   D  +KIL        
Sbjct: 455 INGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGL 514

Query: 351 ---------------DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                           +M +A   P V TY  L++G      +  A   F  M      P
Sbjct: 515 QEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTP 574

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           ++  Y  ++  LCK+  ++EA+ L   +   +  P ++TY +LID L K   +E+A+ L 
Sbjct: 575 NVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALL 634

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M E+GI PD  ++  L+ G C++ ++E A ++ + +  +G  +    Y  +I+ LCK+
Sbjct: 635 KEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKA 694

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              D A+ +   M      PD   F  I+  + +    ++A K+  ++I
Sbjct: 695 GLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKILXEMI 743



 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/440 (27%), Positives = 220/440 (50%), Gaps = 4/440 (0%)

Query: 95  TITKKSHDPSLPSSDGPFVEN----DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           ++    H P++ S    F  N    D  T N ++  FC    +T A  ++  + +R   P
Sbjct: 72  SLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTHITFAFSVLANILKRGYHP 131

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           +      LI+GL     I+KA      +V  G   + ++Y  ++ GLCK G+ ++   LL
Sbjct: 132 NAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRTLINGLCKTGETKAVARLL 191

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
            ++     +PDV+ YNTI+ ++  N     A   + + + KG  P ++TY  L+   C  
Sbjct: 192 RKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKGISPNVVTYNALVYGFCIM 251

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             +  A  +L++M ++  +PD+ T+N+L++   K+GK   A +V+  ++   ++P+ +TY
Sbjct: 252 GHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAKIVLAVMMKACIKPDVVTY 311

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N+L+              +   M ++  +P V TY  +I+GLCK  +VD A++ F +M  
Sbjct: 312 NSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGLCKEKMVDEAMSLFEEMKY 371

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           KN  PDIVTY +++  LCK   L  A+ L   +      P + +Y  L+D L K G +E 
Sbjct: 372 KNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLEN 431

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A   + +++  G   +  T+  +I G C+AD   EA+DL  ++  +G       ++ +I 
Sbjct: 432 AKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIIC 491

Query: 511 GLCKSKKVDMAIQVLELMIS 530
            L +  + D A ++L  MI+
Sbjct: 492 ALFEKDENDKAEKILREMIA 511



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 118/466 (25%), Positives = 218/466 (46%), Gaps = 23/466 (4%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G+    ++L+  +   +  PD      +I  L +   +  A  +   M++ G
Sbjct: 174 LINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKG 233

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TYN +V G C  G ++ A +LL+EM +    PDV T+NT++  +   GK K A 
Sbjct: 234 ISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAAK 293

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 ++    P ++TY  LI+       +  A  V   MA  G +P++ TY ++++  
Sbjct: 294 IVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDGL 353

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK+   D+A+ +   +  + M P+ +TY +L+  L      +    +   M E    P V
Sbjct: 354 CKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDV 413

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           ++Y IL++ LCK G ++ A   F +++ K    ++ TYN ++  LCK  +  EA+ L   
Sbjct: 414 YSYTILLDALCKGGRLENAKEFFQRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSK 473

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-------------------- 462
           + G  C P  IT+ T+I  L +K   +KA  +  +M+  G                    
Sbjct: 474 MEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMT 533

Query: 463 ---ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
              I PD +T+ TL+ G+   ++++ A  +   + + G       Y ++I GLCK K VD
Sbjct: 534 KACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVD 593

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            A+ + E M      P+   +++++  +  +   E A  L +++ E
Sbjct: 594 EAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKE 639



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/360 (30%), Positives = 184/360 (51%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A+A  D M +    P    +N IL ++ +N  +   I  +K     G  P L T  IL+ 
Sbjct: 47  AVASFDRMLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMN 106

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             C    I  A  VL ++   G  P+ +T N+L+   C +G+   A+   + ++++G + 
Sbjct: 107 CFCHLTHITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQL 166

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N ++Y TL++ L   G   AV ++L  +   S  P V  YN +I+ LCK  L+  A + +
Sbjct: 167 NQVSYRTLINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLY 226

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           ++M+ K   P++VTYN ++   C  G L EA  LL+ +   + +P + T+NTLID L K+
Sbjct: 227 SEMIVKGISPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKE 286

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G M+ A ++   MM+  I PD +T+ +LI G+   ++V+ A  +   + + G       Y
Sbjct: 287 GKMKAAKIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTY 346

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I GLCK K VD A+ + E M      PD   +++++  +  +   E A  L +K+ E
Sbjct: 347 TTMIDGLCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKE 406



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 108/388 (27%), Positives = 198/388 (51%), Gaps = 2/388 (0%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M++    P T  +N ++  L       + I+L  +   +G  PD+ T N ++        
Sbjct: 54  MLLMRPPPPTFHFNYILSSLVNNKHYPTVISLFKKFESNGATPDLCTLNILMNCFCHLTH 113

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A     + L++G  P  IT   LI+ +C +  I +A+   D +  +G   + V+Y +
Sbjct: 114 ITFAFSVLANILKRGYHPNAITLNTLIKGLCFRGEIKKALYFHDQVVAQGFQLNQVSYRT 173

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEA 356
           L+N  CK G+      ++  L    ++P+ + YNT++HSL  ++   DA D   +++ + 
Sbjct: 174 LINGLCKTGETKAVARLLRKLEGHSVKPDVVMYNTIIHSLCKNKLLGDACDLYSEMIVKG 233

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             SP V TYN L+ G C  G +  A +  N+M  KN  PD+ T+NT++ AL KEG +  A
Sbjct: 234 I-SPNVVTYNALVYGFCIMGHLKEAFSLLNEMKLKNINPDVCTFNTLIDALGKEGKMKAA 292

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             +L ++  +   P ++TYN+LIDG      ++ A  ++  M ++G++P+  T+ T+I G
Sbjct: 293 KIVLAVMMKACIKPDVVTYNSLIDGYFFLNKVKNAKYVFYSMAQSGVTPNVRTYTTMIDG 352

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C+   V+EA+ L +E+  +        Y  +I GLCK+  ++ AI + + M     +PD
Sbjct: 353 LCKEKMVDEAMSLFEEMKYKNMIPDIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPD 412

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              ++ ++  +   G  E A + +Q+L+
Sbjct: 413 VYSYTILLDALCKGGRLENAKEFFQRLL 440



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 95/371 (25%), Positives = 170/371 (45%), Gaps = 23/371 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C    L  A  L   M  +   PD +    L+  L +  R+E A +  
Sbjct: 377 DIVTYTSLIDGLCKNHHLERAIALCKKMKEQGIQPDVYSYTILLDALCKGGRLENAKEFF 436

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q +++ G   +  TYN+M+ GLCK      A+ L  +M   GC PD IT+ TI+  +F+ 
Sbjct: 437 QRLLVKGYHLNVQTYNVMINGLCKADLFGEAMDLKSKMEGKGCMPDAITFKTIICALFEK 496

Query: 236 GKFKQAIGFWKDQLRKGC-----------------------PPYLITYTILIEQVCKQCG 272
            +  +A    ++ + +G                         P ++TY  L++       
Sbjct: 497 DENDKAEKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVNE 556

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           +  A  V   MA  G +P++  Y  +++  CK+   D+A+ +   +  + M PN +TY +
Sbjct: 557 LKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTS 616

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L+ +L      +    +L  M E    P V++Y IL++GLCK G ++ A   F +++ K 
Sbjct: 617 LIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVKG 676

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
              ++  Y  ++  LCK G+ +EAL L   +    C P  +T++ +I  L +K   +KA 
Sbjct: 677 YHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKAE 736

Query: 453 VLYGQMMENGI 463
            +  +M+  G+
Sbjct: 737 KILXEMIARGL 747



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 84/335 (25%), Positives = 155/335 (46%), Gaps = 31/335 (9%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN----LIRGLIRIDRI 168
           ++ D  +   +L   C  G+L +A +      +R  +  +H  +     +I GL + D  
Sbjct: 409 IQPDVYSYTILLDALCKGGRLENAKEFF----QRLLVKGYHLNVQTYNVMINGLCKADLF 464

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE--------- 219
            +A  +   M   G +PD IT+  ++  L ++ +   A  +L EM   G +         
Sbjct: 465 GEAMDLKSKMEGKGCMPDAITFKTIICALFEKDENDKAEKILREMIARGLQEARKVRLKE 524

Query: 220 --------------PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                         PDV+TY T++   F   + K A   +    + G  P +  YTI+I+
Sbjct: 525 AKIVLAVMTKACIKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMID 584

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            +CK+  +  A+ + ++M  +   P+IVTY SL++  CK    + A+ ++  +   G++P
Sbjct: 585 GLCKKKTVDEAMSLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQP 644

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           +  +Y  LL  L   G  +   +I   +    +   V  Y  +IN LCK GL D A++  
Sbjct: 645 DVYSYTILLDGLCKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQ 704

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +M  K C PD VT++ ++ AL ++   ++A ++L
Sbjct: 705 XKMEDKGCMPDAVTFDIIIWALFEKDENDKAEKIL 739



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 64/247 (25%), Positives = 127/247 (51%), Gaps = 9/247 (3%)

Query: 114 ENDEKTNNKILQNFCSRG-------KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           END+    KIL+   +RG       +L +A  ++ +M +    PD      L+ G   ++
Sbjct: 498 ENDKA--EKILREMIARGLQEARKVRLKEAKIVLAVMTKACIKPDVVTYGTLMDGYFLVN 555

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
            ++ A  V   M   G  P+   Y +M+ GLCK+  +  A++L +EM      P+++TY 
Sbjct: 556 ELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAMSLFEEMKHKNMFPNIVTYT 615

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           +++  +  N   ++AI   K+    G  P + +YTIL++ +CK   +  A E+   + ++
Sbjct: 616 SLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGLCKSGRLEGAKEIFQRLLVK 675

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G   ++  Y +++N  CK G +D+A+ +   +  +G  P+++T++ ++ +L  +   D  
Sbjct: 676 GYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDAVTFDIIIWALFEKDENDKA 735

Query: 347 DKILDIM 353
           +KIL  M
Sbjct: 736 EKILXEM 742



 Score = 89.0 bits (219), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 53/211 (25%), Positives = 104/211 (49%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T   ++  +    +L  A  +   MA+    P+      +I GL +   +++A 
Sbjct: 537 IKPDVVTYGTLMDGYFLVNELKHAKYVFYSMAQMGVTPNVQCYTIMIDGLCKKKTVDEAM 596

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M      P+ +TY  ++  LCK   +  AIALL EM   G +PDV +Y  +L  +
Sbjct: 597 SLFEEMKHKNMFPNIVTYTSLIDALCKNHHLERAIALLKEMKEHGIQPDVYSYTILLDGL 656

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G+ + A   ++  L KG    +  YT +I ++CK      A+++   M  +GC PD 
Sbjct: 657 CKSGRLEGAKEIFQRLLVKGYHLNVQVYTAMINELCKAGLFDEALDLQXKMEDKGCMPDA 716

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           VT++ ++    ++ + D A  ++  +++RG+
Sbjct: 717 VTFDIIIWALFEKDENDKAEKILXEMIARGL 747


>gi|356503775|ref|XP_003520679.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Glycine max]
          Length = 777

 Score =  207 bits (528), Expect = 8e-51,   Method: Compositional matrix adjust.
 Identities = 141/507 (27%), Positives = 235/507 (46%), Gaps = 64/507 (12%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP--------DFH----------- 153
           VE +  T N +L   C  G++ DA +++  M     +P        D H           
Sbjct: 258 VECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFD 317

Query: 154 ----------FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
                     +CI L+ GL R+ RIEKA +VL  +V +G  P  I+YN++V   C+ G +
Sbjct: 318 GKEIRIDERTYCI-LLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGDV 376

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
           + AI   ++M   G EP+ IT+NT++    + G+   A  + +  + KG  P + TY  L
Sbjct: 377 KKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNSL 436

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I    ++    R  E LD+M   G  P++++Y SL+N  CK  K  DA +V+ +++ RG+
Sbjct: 437 INGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEIVLADMIGRGV 496

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN+  YN L+ +  S        +  D M ++    T+ TYN LINGL + G V +A +
Sbjct: 497 SPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKAED 556

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT--------- 434
            F QM  K C PD++TYN+++    K     + L+L   +      P + T         
Sbjct: 557 LFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYACR 616

Query: 435 -------------------------YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
                                    YN +I   A+ G + KAM L+ QM++ G+  D +T
Sbjct: 617 KEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGVDCDKVT 676

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +LI  + R  +V E   L+ ++  +G   +   Y ++I GLC  K  + A      M+
Sbjct: 677 YNSLILAYLRDRRVSEIKHLVDDMKAKGLVPKVDTYNILIKGLCDLKDFNGAYFWYREMV 736

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEA 556
                 + ++   ++  + ++GM  EA
Sbjct: 737 ERGLLLNVSMCYQLISGLREEGMLREA 763



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 130/477 (27%), Positives = 229/477 (48%), Gaps = 31/477 (6%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L   C   ++ DA KL D M +RN +P+      LI G  ++  IE+A    + M  
Sbjct: 196 NLVLGGLCKVRRIKDARKLFDEMIQRNMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKE 255

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP-------------------- 220
                + +TYN ++ GLC  G++  A  +L EM  SG  P                    
Sbjct: 256 QNVECNLVTYNSLLNGLCGSGRVDDAREVLLEMEGSGFLPGGFLSFVFDDHSNGAGDDGL 315

Query: 221 --------DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
                   D  TY  +L  +   G+ ++A       +  G  P  I+Y IL+   C++  
Sbjct: 316 FDGKEIRIDERTYCILLNGLCRVGRIEKAEEVLAKLVENGVTPSKISYNILVNAYCQEGD 375

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           + +AI   + M   G  P+ +T+N++++  C+ G+ D A   +  ++ +G+ P   TYN+
Sbjct: 376 VKKAILTTEQMEERGLEPNRITFNTVISKFCETGEVDHAETWVRRMVEKGVSPTVETYNS 435

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK-YGLVDRAINSFNQMVSK 391
           L++  G +G +    + LD M++A   P V +Y  LIN LCK   L+D  I     M+ +
Sbjct: 436 LINGYGQKGHFVRCFEFLDEMDKAGIKPNVISYGSLINCLCKDRKLIDAEI-VLADMIGR 494

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              P+   YN ++ A C    L +A +    +  S     L+TYNTLI+GL + G ++KA
Sbjct: 495 GVSPNAEIYNMLIEASCSLSKLKDAFRFFDEMIQSGIDATLVTYNTLINGLGRNGRVKKA 554

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             L+ QM   G +PD IT+ +LI G+ ++   ++ ++L  ++   G K     +  +I+ 
Sbjct: 555 EDLFLQMAGKGCNPDVITYNSLISGYAKSVNTQKCLELYDKMKILGIKPTVGTFHPLIYA 614

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            C+ + V    ++ + M+     PD  V++ ++   A+DG   +A  L Q++++  V
Sbjct: 615 -CRKEGVVTMDKMFQEMLQMDLVPDQFVYNEMIYSYAEDGNVMKAMSLHQQMVDQGV 670



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 130/517 (25%), Positives = 224/517 (43%), Gaps = 41/517 (7%)

Query: 80  SESHVLAVNKKLRGLTITKKSHDPSLPSSDG----PFVENDEKTNNKILQNFCSRGKLTD 135
           S    +   + LR L +TK +   SL         PF  ++       L   CS  K+ D
Sbjct: 53  SRGRTITARRFLRSLLLTKTAF-SSLSELHAHVSKPFFSDN-------LLWLCSVSKMLD 104

Query: 136 -ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
            A+ L   M +   +P       L+R L+     EK   V   ++ SG  PD + Y   V
Sbjct: 105 EATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAV 164

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
                   +     L+  M   G  P V  YN +L  +    + K A   + + +++   
Sbjct: 165 QAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMV 224

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P  +TY  LI+  CK  GI  A+   + M  +    ++VTYNSL+N  C  G+ DDA  V
Sbjct: 225 PNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREV 284

Query: 315 INNLLSRGMEPNSI----------------------------TYNTLLHSLGSRGCWDAV 346
           +  +   G  P                               TY  LL+ L   G  +  
Sbjct: 285 LLEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKA 344

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           +++L  + E   +P+  +YNIL+N  C+ G V +AI +  QM  +  +P+ +T+NTV+  
Sbjct: 345 EEVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISK 404

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            C+ G ++ A   +  +     SP + TYN+LI+G  +KG   +      +M + GI P+
Sbjct: 405 FCETGEVDHAETWVRRMVEKGVSPTVETYNSLINGYGQKGHFVRCFEFLDEMDKAGIKPN 464

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            I++ +LI   C+  ++ +A  +L ++  RG       Y ++I   C   K+  A +  +
Sbjct: 465 VISYGSLINCLCKDRKLIDAEIVLADMIGRGVSPNAEIYNMLIEASCSLSKLKDAFRFFD 524

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            MI S        ++T++  +  +G  ++A  L+ ++
Sbjct: 525 EMIQSGIDATLVTYNTLINGLGRNGRVKKAEDLFLQM 561



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 74/321 (23%), Positives = 146/321 (45%), Gaps = 28/321 (8%)

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A ++   M  +G  P   + N L+        ++  + V  +++  G  P+++ Y   + 
Sbjct: 106 ATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYGKAVQ 165

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           +       D   +++  M +    P+VF YN+++ GLCK   +  A   F++M+ +N  P
Sbjct: 166 AAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQRNMVP 225

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           + VTYNT++   CK G + EAL     +   +    L+TYN+L++GL   G ++ A  + 
Sbjct: 226 NTVTYNTLIDGYCKVGGIEEALGFKERMKEQNVECNLVTYNSLLNGLCGSGRVDDAREVL 285

Query: 456 GQMMENGISP----------------------------DDITHRTLIWGFCRADQVEEAV 487
            +M  +G  P                            D+ T+  L+ G CR  ++E+A 
Sbjct: 286 LEMEGSGFLPGGFLSFVFDDHSNGAGDDGLFDGKEIRIDERTYCILLNGLCRVGRIEKAE 345

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           ++L ++ + G      +Y ++++  C+   V  AI   E M     +P+   F+T++ K 
Sbjct: 346 EVLAKLVENGVTPSKISYNILVNAYCQEGDVKKAILTTEQMEERGLEPNRITFNTVISKF 405

Query: 548 ADDGMTEEAYKLWQKLIEWKV 568
            + G  + A    ++++E  V
Sbjct: 406 CETGEVDHAETWVRRMVEKGV 426



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/157 (23%), Positives = 72/157 (45%)

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           ML+EA  L   +      P   + N L+  L      EK + ++  ++++G  PD + + 
Sbjct: 102 MLDEATDLYSTMRKDGFVPSTRSVNRLLRTLVDSRHFEKTLAVFADVIDSGTRPDAVAYG 161

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
             +        +++  +L+K + K G      AY LV+ GLCK +++  A ++ + MI  
Sbjct: 162 KAVQAAVMLKDLDKGFELMKSMVKDGMGPSVFAYNLVLGGLCKVRRIKDARKLFDEMIQR 221

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              P+   ++T++      G  EEA    +++ E  V
Sbjct: 222 NMVPNTVTYNTLIDGYCKVGGIEEALGFKERMKEQNV 258


>gi|302767258|ref|XP_002967049.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
 gi|300165040|gb|EFJ31648.1| hypothetical protein SELMODRAFT_70269 [Selaginella moellendorffii]
          Length = 454

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 196/407 (48%), Gaps = 6/407 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L++ L R  +I+KA   +  M     VPD  TYN+++  LCK  +I  AI   + M    
Sbjct: 16  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP--- 72

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            EPDV+TYNT+L  +  NG+  QA   +      G  P  +TYT LI+  CK C    A 
Sbjct: 73  -EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 131

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L  MA   CSP + +Y S++N  CK  K D A  +   +   G +P+ +TYNTL+H L
Sbjct: 132 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 191

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             +        +L +M E S  P   T+  LI GLC    +  A   F  M  + C PD+
Sbjct: 192 CVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDL 251

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VT+  ++  LC    L  AL ++   N  +C   +I Y  +   L ++   ++A  L  +
Sbjct: 252 VTHTVLVSKLCIRRKLRPALSVVR--NYPACPEAVILYTPIFRELGRRRGFDRAARLLQK 309

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M   G++P+ +T+     G     +   A    + + ++G +    AY +++ G CK+ +
Sbjct: 310 MARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANR 369

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +DMA +++  M  S   P+   ++T+V      G  E   +L   ++
Sbjct: 370 LDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 416



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/437 (24%), Positives = 210/437 (48%), Gaps = 6/437 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C  GK+  A   I  MAR   +PD      +I  L +  RI +A +  + M    
Sbjct: 16  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM---- 71

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TYN ++GGLCK G++  A +L   M  +G  P  +TY T++       +F+ A 
Sbjct: 72  PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 131

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G  +    + C P + +Y  +I  +CK   + +A ++ ++M + GC PD VTYN+L++  
Sbjct: 132 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 191

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C + +  +A  ++  ++    +P+ IT+  L+  L +         +   M +   +P +
Sbjct: 192 CVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDL 251

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+ +L++ LC    +  A++      +  C   ++ Y  +   L +    + A +LL  
Sbjct: 252 VTHTVLVSKLCIRRKLRPALSVVRNYPA--CPEAVILYTPIFRELGRRRGFDRAARLLQK 309

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P ++TY     GL       +A   + +M+E GI PD + +  L+ GFC+A++
Sbjct: 310 MARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANR 369

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++ A  +++ + + G       Y  ++   C+  KV+   ++L  M+S   +PD   +ST
Sbjct: 370 LDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWST 429

Query: 543 IVKKVADDGMTEEAYKL 559
           +V  +   G  + AY  
Sbjct: 430 LVAGLFRVGQVDAAYSF 446



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 176/377 (46%), Gaps = 2/377 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N +L   C  G++  A  L   M      P       LI    ++ + E A  
Sbjct: 73  EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 132

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +LQ+M      P   +Y  ++ GLCK  ++  A  L +EM ++GC+PD +TYNT++  + 
Sbjct: 133 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 192

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              +  +A       +     P  IT+T LIE +C    I  A  +   MA +GC+PD+V
Sbjct: 193 VKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV 252

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+  LV+  C + K   A+ V+ N  +       I Y  +   LG R  +D   ++L  M
Sbjct: 253 THTVLVSKLCIRRKLRPALSVVRNYPA--CPEAVILYTPIFRELGRRRGFDRAARLLQKM 310

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                +P V TY     GL  +    RA   F +M+ +  +PD+V YN ++   CK   L
Sbjct: 311 ARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKANRL 370

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A +++  ++ S   P ++TYNTL+    +KG +E    L   M+  G  PD  T  TL
Sbjct: 371 DMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTL 430

Query: 474 IWGFCRADQVEEAVDLL 490
           + G  R  QV+ A   L
Sbjct: 431 VAGLFRVGQVDAAYSFL 447



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 101/348 (29%), Positives = 180/348 (51%), Gaps = 6/348 (1%)

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C+P+ ++Y  +++ +   GK  +A     +  R+   P + TY ++I+ +CK   I+RAI
Sbjct: 6   CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 65

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E  + M      PD+VTYN+L+   CK G+   A  +  ++   G+ P+ +TY TL+   
Sbjct: 66  EFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVF 121

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                ++    +L +M     SPTV++Y  +INGLCK   VD+A   F +M    C+PD 
Sbjct: 122 CKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDR 181

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTYNT++  LC +  L+EA  LL ++  +S  P  IT+  LI+GL     +++A VL+  
Sbjct: 182 VTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQG 241

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M + G +PD +TH  L+   C   ++  A+ +++        +    Y  +   L + + 
Sbjct: 242 MAKQGCAPDLVTHTVLVSKLCIRRKLRPALSVVRNYPACPEAV--ILYTPIFRELGRRRG 299

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            D A ++L+ M      P+   ++   K + D      AY+ +++++E
Sbjct: 300 FDRAARLLQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLE 347



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 99/388 (25%), Positives = 183/388 (47%), Gaps = 4/388 (1%)

Query: 77  EWSSESHVLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNKILQNFCSRGKLT 134
           E   E  V+  N  L GL    +         S +G  +   + T   ++  FC   +  
Sbjct: 69  ETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFE 128

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
            A  L+ +MA R   P  +   ++I GL +  ++++A ++ + M ++G  PD +TYN ++
Sbjct: 129 TAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI 188

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            GLC + ++  A  LL  M  +  +PD IT+  ++  +    + K+A   ++   ++GC 
Sbjct: 189 HGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCA 248

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P L+T+T+L+ ++C +  +  A+ V+ +     C   ++ Y  +     ++  +D A  +
Sbjct: 249 PDLVTHTVLVSKLCIRRKLRPALSVVRNYP--ACPEAVILYTPIFRELGRRRGFDRAARL 306

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +  +  RG+ PN +TY      LG         +    M E    P +  YN+L++G CK
Sbjct: 307 LQKMARRGVAPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCK 366

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
              +D A      M      P+IVTYNT++G  C++G +    +LLH +      P + T
Sbjct: 367 ANRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVAT 426

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++TL+ GL + G ++ A       M  G
Sbjct: 427 WSTLVAGLFRVGQVDAAYSFLNLAMSQG 454



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 79/246 (32%), Positives = 130/246 (52%), Gaps = 4/246 (1%)

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           + S+  +PN+++Y  L+ +L   G  D     +  M      P VFTYN++I+ LCK   
Sbjct: 1   IFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARR 60

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           + RAI  F  M     +PD+VTYNT+LG LCK G + +A  L   + G+  +P  +TY T
Sbjct: 61  ISRAIEFFETMP----EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTT 116

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LID   K    E A  L   M     SP   ++ ++I G C+  +V++A  L +E+   G
Sbjct: 117 LIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAG 176

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K     Y  +IHGLC  +++  A  +L +M+ + ++PD   F+ +++ +      +EA+
Sbjct: 177 CKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENSFQPDKITFTALIEGLCTTDRIKEAF 236

Query: 558 KLWQKL 563
            L+Q +
Sbjct: 237 VLFQGM 242



 Score = 55.5 bits (132), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 33/140 (23%), Positives = 62/140 (44%), Gaps = 4/140 (2%)

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C P  ++Y  L+  L + G ++KA     +M    + PD  T+  +I   C+A ++  A+
Sbjct: 6   CKPNALSYCYLVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAI 65

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +  + + +         Y  ++ GLCK+ +V  A  +   M  +   P D  ++T++   
Sbjct: 66  EFFETMPEPDV----VTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVF 121

Query: 548 ADDGMTEEAYKLWQKLIEWK 567
                 E AY L Q +   K
Sbjct: 122 CKMCQFETAYGLLQLMASRK 141


>gi|357499049|ref|XP_003619813.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494828|gb|AES76031.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 614

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 243/452 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  FC  G L  A  ++  + +    PD      LI+GL    ++ +A 
Sbjct: 95  IQPDLFTFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREAL 154

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                ++  G   D ++Y  ++ GLCK G+ R+A+ +L ++     +P+V+ YNTI+ ++
Sbjct: 155 HFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSL 214

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +     A     + + K   P ++TYT LI        +  A+ + + M ++   PD+
Sbjct: 215 CKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDV 274

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+N LV+  CK+G+   A  V+  ++ +G++ N +TYN+L+         +    + + 
Sbjct: 275 YTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNT 334

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M     +P V +Y+I+INGLCK  +VD A+N F +M SK+  P+ VTYN+++  L K G 
Sbjct: 335 MARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGR 394

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +++A  L++ ++       +ITY++L+D L K   ++KA+ L  ++ + GI P+  T+  
Sbjct: 395 ISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAITLITKIKDQGIQPNIYTYTI 454

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  ++++A  + +++  +G  +    Y ++++GLCK    D A+ ++  M  + 
Sbjct: 455 LVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLCKEGLFDEALSLVSKMEDNG 514

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             PD   + T+V+ + ++   ++A KL +++I
Sbjct: 515 CIPDAVTYETLVRALFENDKNDKAVKLLREMI 546



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 220/444 (49%), Gaps = 2/444 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMV 179
           NKIL +         A      M  +   PD F F I LI     +  +  A  VL  + 
Sbjct: 68  NKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNI-LINCFCHLGHLNFAFSVLAKIF 126

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  PDT+T   ++ GLC  G++R A+   D++   G   D ++Y T++  +   G+ +
Sbjct: 127 KLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETR 186

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            A+   +        P ++ Y  +I+ +CK   +  A ++  +M ++   PD+VTY +L+
Sbjct: 187 AALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLI 246

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
                 G+  +AV + N +L + ++P+  T+N L+  L   G       +L +M +    
Sbjct: 247 YGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVD 306

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             + TYN L++G       ++A   FN M  +   PD+ +Y+ ++  LCK  M++EA+ L
Sbjct: 307 SNIVTYNSLMDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNL 366

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              ++  S +P  +TYN+LIDGL K G +  A  L  +M   G   D IT+ +L+   C+
Sbjct: 367 FKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCK 426

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             QV++A+ L+ +I  +G +     Y +++ GLCK+ ++  A  V + ++   Y  D  +
Sbjct: 427 NHQVDKAITLITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKM 486

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           ++ +V  +  +G+ +EA  L  K+
Sbjct: 487 YNVMVNGLCKEGLFDEALSLVSKM 510



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/354 (29%), Positives = 186/354 (52%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG  V+ +    N I+ + C    +  AS L   M  +   PD      LI G + + R+
Sbjct: 196 DGLLVQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRL 255

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           ++A  +   M++    PD  T+N++V GLCK G+++ A  +L  M   G + +++TYN++
Sbjct: 256 KEAVGLFNQMLLKNIKPDVYTFNILVDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSL 315

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +   F   +  +A   +    R+G  P + +Y+I+I  +CK   +  A+ +  +M  +  
Sbjct: 316 MDGYFLVKQENKATFVFNTMARRGVTPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSM 375

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P+ VTYNSL++   K G+  DA  ++N + +RG   + ITY++LL +L      D    
Sbjct: 376 APNTVTYNSLIDGLLKYGRISDAWDLVNEMHNRGQPADVITYSSLLDALCKNHQVDKAIT 435

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           ++  + +    P ++TY IL++GLCK G +  A   +  ++ K    D+  YN ++  LC
Sbjct: 436 LITKIKDQGIQPNIYTYTILVDGLCKNGRLKDAQAVYQDLLIKGYHLDVKMYNVMVNGLC 495

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           KEG+ +EAL L+  +  + C P  +TY TL+  L +    +KA+ L  +M+  G
Sbjct: 496 KEGLFDEALSLVSKMEDNGCIPDAVTYETLVRALFENDKNDKAVKLLREMIVQG 549



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/401 (27%), Positives = 192/401 (47%), Gaps = 3/401 (0%)

Query: 165 IDRIEKA-SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           ID ++ A S    I+ M   V     +N ++  L K     +AI+   +M +   +PD+ 
Sbjct: 41  IDNVDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLF 100

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           T+N ++      G    A        + G  P  +T T LI+ +C    +  A+   DD+
Sbjct: 101 TFNILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDV 160

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             +G   D V+Y +L+N  CK G+   A+ V+  +    ++PN + YNT++ SL      
Sbjct: 161 IAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLV 220

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
                +   M      P V TY  LI G    G +  A+  FNQM+ KN +PD+ T+N +
Sbjct: 221 IHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQMLLKNIKPDVYTFNIL 280

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +  LCKEG + +A  +L ++        ++TYN+L+DG        KA  ++  M   G+
Sbjct: 281 VDGLCKEGEMKKARNVLAVMIKQGVDSNIVTYNSLMDGYFLVKQENKATFVFNTMARRGV 340

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           +PD  ++  +I G C+   V+EAV+L KE+  +        Y  +I GL K  ++  A  
Sbjct: 341 TPDVQSYSIMINGLCKTKMVDEAVNLFKEMHSKSMAPNTVTYNSLIDGLLKYGRISDAWD 400

Query: 524 VLELMISSRYKPDDTV-FSTIVKKVADDGMTEEAYKLWQKL 563
           ++  M  +R +P D + +S+++  +  +   ++A  L  K+
Sbjct: 401 LVNEM-HNRGQPADVITYSSLLDALCKNHQVDKAITLITKI 440



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 61/221 (27%), Positives = 104/221 (47%)

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           DAV     I++  +    +F +N +++ L K      AI+   QM  K  QPD+ T+N +
Sbjct: 46  DAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNIL 105

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +   C  G LN A  +L  +      P  +T  TLI GL   G + +A+  +  ++  G 
Sbjct: 106 INCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAKGF 165

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
             D +++ TLI G C+  +   A+ +L++I     +     Y  +I  LCK K V  A  
Sbjct: 166 HLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHASD 225

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +   MI  R  PD   ++T++      G  +EA  L+ +++
Sbjct: 226 LCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAVGLFNQML 266



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 75/321 (23%), Positives = 127/321 (39%), Gaps = 71/321 (22%)

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            +R    P +  +  ++  + K      AI     M ++   PD+ T+N L+N  C  G 
Sbjct: 56  HMRNPVQP-IFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFNILINCFCHLGH 114

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            + A  V+  +   G  P+++T  TL                                  
Sbjct: 115 LNFAFSVLAKIFKLGFHPDTVTITTL---------------------------------- 140

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
            I GLC  G V  A++  + +++K    D V+Y T++  LCK G    ALQ+L  ++G  
Sbjct: 141 -IKGLCLNGKVREALHFHDDVIAKGFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLL 199

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P ++ YNT+ID L K   +  A  L  +M+   I PD +T+ TLI+G     +++EAV
Sbjct: 200 VQPNVVMYNTIIDSLCKDKLVIHASDLCSEMIVKRIFPDVVTYTTLIYGCLIVGRLKEAV 259

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L  +                                   M+    KPD   F+ +V  +
Sbjct: 260 GLFNQ-----------------------------------MLLKNIKPDVYTFNILVDGL 284

Query: 548 ADDGMTEEAYKLWQKLIEWKV 568
             +G  ++A  +   +I+  V
Sbjct: 285 CKEGEMKKARNVLAVMIKQGV 305



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 53/198 (26%), Positives = 97/198 (48%), Gaps = 1/198 (0%)

Query: 378 VDRAINSFNQMVS-KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
           VD A++SFN ++  +N    I  +N +L +L K    + A+     +      P L T+N
Sbjct: 44  VDDAVSSFNHILHMRNPVQPIFEFNKILSSLVKLNHFHTAISFSKQMELKQIQPDLFTFN 103

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            LI+     G +  A  +  ++ + G  PD +T  TLI G C   +V EA+    ++  +
Sbjct: 104 ILINCFCHLGHLNFAFSVLAKIFKLGFHPDTVTITTLIKGLCLNGKVREALHFHDDVIAK 163

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G  +   +Y  +I+GLCK+ +   A+QVL  +     +P+  +++TI+  +  D +   A
Sbjct: 164 GFHLDQVSYGTLINGLCKTGETRAALQVLRKIDGLLVQPNVVMYNTIIDSLCKDKLVIHA 223

Query: 557 YKLWQKLIEWKVFEKGTT 574
             L  ++I  ++F    T
Sbjct: 224 SDLCSEMIVKRIFPDVVT 241


>gi|255556711|ref|XP_002519389.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223541456|gb|EEF43006.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 634

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 119/408 (29%), Positives = 211/408 (51%), Gaps = 20/408 (4%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           N  R L  I + EKA  V++ M+  G +PD+ TY+ ++G LC   ++  A  L  EM  +
Sbjct: 92  NFTRCLCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRN 151

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  PDV TY T+L      G  +QA  ++ +  + GC P ++TYT LI    K   ++RA
Sbjct: 152 GITPDVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRA 211

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME-PNSITYNTLLH 335
            E+ + M   GC P+IVTY +L++  CK G+ + A  +   + +  ++ P+         
Sbjct: 212 NEIFEMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPD--------- 262

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                     VD    I++     P V TY  L++GLCK   V  A +    M  + C+P
Sbjct: 263 ----------VDIYFRIVDSELKEPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEP 312

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           + + Y+ ++   CK G L+EA ++   + G  CSP + TY++LID L K   ++ A+ + 
Sbjct: 313 NQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVL 372

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M+EN  +P+ + +  ++ G C+  + +EA  L+  + ++G       Y  +I G  K+
Sbjct: 373 TKMLENSCAPNVVIYTEMVDGLCKVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKA 432

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +VD  +++L+LM S    P+   +  ++      G+ ++A+KL +++
Sbjct: 433 GRVDRCLELLQLMTSKGCAPNFITYRVLINHCCAAGLLDDAHKLLEEM 480



 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 133/464 (28%), Positives = 214/464 (46%), Gaps = 19/464 (4%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  GK   A  +I  M  +  IPD      +I  L    ++EKA ++ Q M  +G  PD
Sbjct: 97  LCCIGKFEKAYNVIREMMSKGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPD 156

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY  ++   CK G I  A    DEM   GC P+V+TY  ++       K  +A   ++
Sbjct: 157 VYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFE 216

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA-----------------IEGCS 289
             L  GC P ++TYT LI+  CK     +A ++   M                   E   
Sbjct: 217 MMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKE 276

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++VTY +LV+  CK  K  +A  ++  +   G EPN I Y+ L+      G  D   ++
Sbjct: 277 PNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEV 336

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M     SP V+TY+ LI+ L K   +D A+    +M+  +C P++V Y  ++  LCK
Sbjct: 337 FTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLCK 396

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G  +EA +L+ ++    C P ++TY  +IDG  K G +++ + L   M   G +P+ IT
Sbjct: 397 VGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFIT 456

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +R LI   C A  +++A  LL+E+ +         YR VI G   S +   ++ +L  + 
Sbjct: 457 YRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGF--SHEFVASLGLLAELS 514

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
                P   V+  ++      G  E A +L ++L  +    + T
Sbjct: 515 EDGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNT 558



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/382 (27%), Positives = 185/382 (48%), Gaps = 35/382 (9%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ-- 270
           M   GC P  + +N+++     +G +  A    K  +  G  P  + Y ILI  +C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 271 ------CGIA-RAIEVLDDMAIEGCSPDIVTYNSLVNFS---CKQGKYDDAVLVINNLLS 320
                  G+A RA   + +M +      ++   ++ NF+   C  GK++ A  VI  ++S
Sbjct: 62  LPSMEVIGLAERAYNEMLEMGV------VLNKVNVCNFTRCLCCIGKFEKAYNVIREMMS 115

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +G  P+S TY+ ++  L +    +   ++   M     +P V+TY  L++  CK GL+++
Sbjct: 116 KGFIPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQ 175

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A N F++M    C P++VTY  ++ A  K   L+ A ++  ++  + C P ++TY  LID
Sbjct: 176 ARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALID 235

Query: 441 GLAKKGCMEKAMVLYGQMMENGI-----------------SPDDITHRTLIWGFCRADQV 483
           G  K G  EKA  +Y +M  + +                  P+ +T+  L+ G C+A +V
Sbjct: 236 GHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELKEPNVVTYGALVDGLCKAHKV 295

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA DLL+ +   G +     Y  +I G CK  K+D A +V   M+     P+   +S++
Sbjct: 296 KEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQEVFTKMLGHGCSPNVYTYSSL 355

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           + K+  D   + A K+  K++E
Sbjct: 356 IDKLFKDKRLDLALKVLTKMLE 377



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 117/458 (25%), Positives = 180/458 (39%), Gaps = 84/458 (18%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L  FC  G +  A    D M +    P+      LI   ++  ++ +A+++ 
Sbjct: 156 DVYTYTTLLDRFCKVGLIEQARNWFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIF 215

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC----------------- 218
           ++M+ +G VP+ +TY  ++ G CK G+   A  +   M                      
Sbjct: 216 EMMLSNGCVPNIVTYTALIDGHCKAGETEKACQIYARMKNDKVDIPDVDIYFRIVDSELK 275

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
           EP+V+TY  ++  +    K K+A    +    +GC P  I Y  LI+  CK   +  A E
Sbjct: 276 EPNVVTYGALVDGLCKAHKVKEARDLLETMSLEGCEPNQIIYDALIDGFCKVGKLDEAQE 335

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           V   M   GCSP++ TY+SL++   K  + D A+ V+  +L     PN + Y  ++  L 
Sbjct: 336 VFTKMLGHGCSPNVYTYSSLIDKLFKDKRLDLALKVLTKMLENSCAPNVVIYTEMVDGLC 395

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
             G  D   +++ +M E    P V TY  +I+G  K G VDR +     M SK C P+ +
Sbjct: 396 KVGKTDEAYRLMLMMEEKGCYPNVVTYTAMIDGFGKAGRVDRCLELLQLMTSKGCAPNFI 455

Query: 399 TYNTVLGALCKEGMLNEA---------------------------------LQLLHLLNG 425
           TY  ++   C  G+L++A                                 L LL  L+ 
Sbjct: 456 TYRVLINHCCAAGLLDDAHKLLEEMKQTYWPKHIGMYRKVIEGFSHEFVASLGLLAELSE 515

Query: 426 SSCSPCLITYNTLIDGLAKKGCME----------------------------------KA 451
               P L  Y  LID   K G +E                                  KA
Sbjct: 516 DGSVPILPVYKLLIDNFIKAGRLEMALELHEELSSFSAAYQNTYVSLIESLTLACKVDKA 575

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
             LY  M   G  P+      LI G  R  + EEA+ L
Sbjct: 576 FKLYSDMTRRGFVPELSMLVCLIKGLLRVGKWEEALQL 613



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/260 (26%), Positives = 124/260 (47%), Gaps = 12/260 (4%)

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK--- 374
           +++ G  P+ + +N+L+H+    G +    K+L  M    + P    YNILI G+C    
Sbjct: 2   MITEGCYPSPMIFNSLVHAYCRSGDYFYAYKLLKKMVICGYQPGYVVYNILIGGICSTED 61

Query: 375 ------YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
                  GL +RA   +N+M+      + V        LC  G   +A  ++  +     
Sbjct: 62  LPSMEVIGLAERA---YNEMLEMGVVLNKVNVCNFTRCLCCIGKFEKAYNVIREMMSKGF 118

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P   TY+ +I  L     +EKA  L+ +M  NGI+PD  T+ TL+  FC+   +E+A +
Sbjct: 119 IPDSSTYSKVIGYLCNASKVEKAFQLFQEMKRNGITPDVYTYTTLLDRFCKVGLIEQARN 178

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
              E+ + G       Y  +IH   K++K+  A ++ E+M+S+   P+   ++ ++    
Sbjct: 179 WFDEMQQDGCAPNVVTYTALIHAYLKTRKLSRANEIFEMMLSNGCVPNIVTYTALIDGHC 238

Query: 549 DDGMTEEAYKLWQKLIEWKV 568
             G TE+A +++ ++   KV
Sbjct: 239 KAGETEKACQIYARMKNDKV 258


>gi|358347566|ref|XP_003637827.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503762|gb|AES84965.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 639

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 238/447 (53%), Gaps = 1/447 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  F    +L  A  ++  + +    PD      L+RGL    ++++A      +
Sbjct: 90  TFNILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHV 149

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDNGK 237
           +      D ++Y  ++ GLCK G+ R+A+ LL ++  +    PDVI Y  I+ +   +  
Sbjct: 150 IRKRFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLVRPDVIMYTAIIDSFCKDKL 209

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A   + + + K   P ++T+  LI   C    +  A+ +L++M++   +P++ T+N 
Sbjct: 210 VIDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNI 269

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  CK+G+   A  V++ ++ +G+EPN +TY +L+         +    + + ++   
Sbjct: 270 LIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRG 329

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +P V +Y+++INGLCK  +VD A+  F +M  KN  P+ VTY++++  LCK G +++  
Sbjct: 330 VTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVW 389

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            L+  +N       +ITYN+L++GL K   ++KA+ L  +M + GI PD  T+ TL+ G 
Sbjct: 390 DLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGL 449

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  ++++A  + +++  +G  +    Y ++I+GLCK    D A+ +L  M  +   PD 
Sbjct: 450 CKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDA 509

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
             + T++  +  +    +A KL +++I
Sbjct: 510 VTYETLISALFKNNKNGKAVKLLREMI 536



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 237/436 (54%), Gaps = 6/436 (1%)

Query: 133 LTDA-SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           L DA S    I+   N  P       ++  L++++  + A    Q M + G  P+  T+N
Sbjct: 33  LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           +++       Q+  A +++ ++   G +PD +T NT+LR +  NGK K+A+ F    +RK
Sbjct: 93  ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG---CSPDIVTYNSLVNFSCKQGKY 308
                 ++Y  LI  +CK      A+++L    IEG     PD++ Y ++++  CK    
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLR--KIEGLLLVRPDVIMYTAIIDSFCKDKLV 210

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            DA  + + ++ + + PN +T+N+L++     G       +L+ M+  + +P V+T+NIL
Sbjct: 211 IDAYDLYSEMIVKKIYPNVVTFNSLIYGFCIVGQLKEAVGLLNEMSLNNVNPNVYTFNIL 270

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I+GLCK G V +A +  + M+ +  +P++VTY +++        +N+A  + + ++    
Sbjct: 271 IDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGV 330

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P + +Y+ +I+GL K   +++A+ L+ +M    ++P+ +T+ +LI G C++ ++ +  D
Sbjct: 331 TPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWD 390

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L+ EI  RG       Y  +++GLCK+ +VD AI +L  M     +PD + ++T+V  + 
Sbjct: 391 LIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLC 450

Query: 549 DDGMTEEAYKLWQKLI 564
            +G  ++A +++Q L+
Sbjct: 451 KNGRLKDAQRIYQDLL 466



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 119/419 (28%), Positives = 206/419 (49%), Gaps = 7/419 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L+  C  GK+ +A    D + R+    D      LI GL +      A   L
Sbjct: 122 DTVTVNTLLRGLCLNGKVKEALNFHDHVIRKRFHLDQVSYGTLINGLCKSGETRAA---L 178

Query: 176 QIMVMSGGV----PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           Q++    G+    PD I Y  ++   CK   +  A  L  EM V    P+V+T+N+++  
Sbjct: 179 QLLRKIEGLLLVRPDVIMYTAIIDSFCKDKLVIDAYDLYSEMIVKKIYPNVVTFNSLIYG 238

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G+ K+A+G   +       P + T+ ILI+ +CK+  + +A  VL  M  +G  P+
Sbjct: 239 FCIVGQLKEAVGLLNEMSLNNVNPNVYTFNILIDGLCKEGEVKKATSVLSVMIKQGVEPN 298

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VTY SL++      + + A  V N +  RG+ PN  +Y+ +++ L      D   K+  
Sbjct: 299 VVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFK 358

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M+  + +P   TY+ LI+GLCK G +    +  +++ ++    +I+TYN++L  LCK  
Sbjct: 359 EMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGLCKNH 418

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +++A+ LL  +      P + TY TL+DGL K G ++ A  +Y  ++  G   +   + 
Sbjct: 419 QVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYT 478

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +I G C+    +EA+ LL ++   G       Y  +I  L K+ K   A+++L  MI+
Sbjct: 479 VMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISALFKNNKNGKAVKLLREMIA 537



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 72/273 (26%), Positives = 134/273 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G++  A+ ++ +M ++   P+     +L+ G   +  + KA  V   +
Sbjct: 266 TFNILIDGLCKEGEVKKATSVLSVMIKQGVEPNVVTYTSLMDGYFLVKEVNKAKHVFNTI 325

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G  P+  +Y++M+ GLCK   +  A+ L  EM +    P+ +TY++++  +  +G+ 
Sbjct: 326 SLRGVTPNVHSYSVMINGLCKNKMVDEAVKLFKEMHLKNMTPNTVTYSSLIDGLCKSGRI 385

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
                   +   +G P  +ITY  L+  +CK   + +AI +L  M  EG  PD+ TY +L
Sbjct: 386 SDVWDLIDEINNRGQPANIITYNSLLNGLCKNHQVDKAIALLTKMKDEGIQPDMSTYTTL 445

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  CK G+  DA  +  +LL +G   N   Y  +++ L   G +D    +L  M +   
Sbjct: 446 VDGLCKNGRLKDAQRIYQDLLCKGYPLNIRMYTVMINGLCKEGFFDEALSLLSQMEDNGC 505

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            P   TY  LI+ L K     +A+    +M+++
Sbjct: 506 MPDAVTYETLISALFKNNKNGKAVKLLREMIAR 538



 Score =  113 bits (282), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 121/225 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +  T   ++  +    ++  A  + + ++ R   P+ H    +I GL +   +++A 
Sbjct: 295 VEPNVVTYTSLMDGYFLVKEVNKAKHVFNTISLRGVTPNVHSYSVMINGLCKNKMVDEAV 354

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+ + M +    P+T+TY+ ++ GLCK G+I     L+DE++  G   ++ITYN++L  +
Sbjct: 355 KLFKEMHLKNMTPNTVTYSSLIDGLCKSGRISDVWDLIDEINNRGQPANIITYNSLLNGL 414

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N +  +AI        +G  P + TYT L++ +CK   +  A  +  D+  +G   +I
Sbjct: 415 CKNHQVDKAIALLTKMKDEGIQPDMSTYTTLVDGLCKNGRLKDAQRIYQDLLCKGYPLNI 474

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
             Y  ++N  CK+G +D+A+ +++ +   G  P+++TY TL+ +L
Sbjct: 475 RMYTVMINGLCKEGFFDEALSLLSQMEDNGCMPDAVTYETLISAL 519



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/204 (25%), Positives = 101/204 (49%), Gaps = 10/204 (4%)

Query: 378 VDRAINSFNQMVSKNCQ-PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
           +D A++SFN ++  N   P I  +N +L +L K      A+     +      P + T+N
Sbjct: 33  LDDAVSSFNHILHMNNHTPPIFEFNKILSSLVKMNHFKIAISFSQQMELKGIQPEMFTFN 92

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            LI+  +    +  A  +  ++++ G  PD +T  TL+ G C   +V+EA++    + ++
Sbjct: 93  ILINCFSHLCQLNFAFSMVAKILKLGYQPDTVTVNTLLRGLCLNGKVKEALNFHDHVIRK 152

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLE-----LMISSRYKPDDTVFSTIVKKVADDG 551
              +   +Y  +I+GLCKS +   A+Q+L      L++    +PD  +++ I+     D 
Sbjct: 153 RFHLDQVSYGTLINGLCKSGETRAALQLLRKIEGLLLV----RPDVIMYTAIIDSFCKDK 208

Query: 552 MTEEAYKLWQKLIEWKVFEKGTTL 575
           +  +AY L+ ++I  K++    T 
Sbjct: 209 LVIDAYDLYSEMIVKKIYPNVVTF 232


>gi|125602942|gb|EAZ42267.1| hypothetical protein OsJ_26834 [Oryza sativa Japonica Group]
          Length = 1088

 Score =  207 bits (528), Expect = 9e-51,   Method: Compositional matrix adjust.
 Identities = 134/480 (27%), Positives = 217/480 (45%), Gaps = 35/480 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G + DA  ++  +      PD     ++I G  R   ++ A +V   M  
Sbjct: 389 NAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDSALQVFNQMAK 448

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV------------------------- 215
            G  P+T+TY+ ++ GLC  G++  A  L+ EM +                         
Sbjct: 449 EGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYED 508

Query: 216 ----------SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                      GCEP+V TY  ++  +  +G  K AIG +    R G  P  +TY  LI 
Sbjct: 509 AWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALIN 568

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            + +   I  A  VL+ M   G   +IVTYN ++   C  G    A+LV+NN+L RG   
Sbjct: 569 ILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSA 628

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N +TYNT++      G   +  +ILD+M +    P  ++Y  LI G CK   ++ A   F
Sbjct: 629 NLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLF 688

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           N+MV     P+ VTY  ++   CK+  L+ A  LL  +  S C P + TYN LI GL K+
Sbjct: 689 NEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQ 748

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
                A  L   M+E GI P+ +T+  +I G C+      A+++  ++ ++G       Y
Sbjct: 749 NNFSGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTY 808

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I  L +  KV+ A  +   +      PD+  +  +++     G  E A+    ++I+
Sbjct: 809 SSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIK 868



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 199/434 (45%), Gaps = 35/434 (8%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +  T + ++   C  G++ +A  LI  M     +P  H C   I  L  +   E A +
Sbjct: 452 EPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPIIALCDMGCYEDAWR 511

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G  P+  TY  ++ GLC  G ++ AI L   MS  G  P+ +TYN ++  + 
Sbjct: 512 LFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFPNTVTYNALINILV 571

Query: 234 DN-----------------------------------GKFKQAIGFWKDQLRKGCPPYLI 258
           +N                                   G  K+A+    + L++G    L+
Sbjct: 572 ENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVMNNMLQRGHSANLV 631

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY  +I+  C       A+ +LD M   GC PD  +Y  L+   CK  K + A  + N +
Sbjct: 632 TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 691

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           +  G+ PN +TY  L+         D    +L+ M  +   P V TYN+LI+GL K    
Sbjct: 692 VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 751

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A      M+ +   P++VTY  ++  LCK G  + AL++ + +    C P L+TY++L
Sbjct: 752 SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 811

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I  L ++G +E+A  L+ ++  +G+ PD+IT+  +I  +  + +VE A + L  + K G 
Sbjct: 812 IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 871

Query: 499 KMRNSAYRLVIHGL 512
           +     Y ++I GL
Sbjct: 872 QPTLWTYGVLIKGL 885



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 217/441 (49%), Gaps = 18/441 (4%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N I++ +C  G  T A +++D+M      PD      LI G  +I ++E A  +   M
Sbjct: 632  TYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKISKMESAFGLFNEM 691

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            V  G  P+ +TY  ++ G CK  ++ +A +LL+ M  SGC P+V TYN ++  +     F
Sbjct: 692  VDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNF 751

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
              A    K  + +G  P ++TYT +I+ +CK    + A+E+ + M  +GC P+++TY+SL
Sbjct: 752  SGAEELCKVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSL 811

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            +    ++GK ++A  +   L   G+ P+ ITY  ++ +    G  +     L  M +A  
Sbjct: 812  IRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGC 871

Query: 359  SPTVFTYNILINGL-CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             PT++TY +LI GL  +Y L D+ + +   +V  NC     T +       ++ +   + 
Sbjct: 872  QPTLWTYGVLIKGLKNEYLLADQRLAALPDVV-PNCSFGYQTTD-------QDAVSVMSA 923

Query: 418  QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L  L  G S        N L+  L+  G   +A  L G M+  G+ PD   + +L+   
Sbjct: 924  KLAELDPGLSVQ----VQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSL 979

Query: 478  CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
             R   V+ A+ + K +  +G ++  + Y+ +I  LC+  +   A    E M+   + PDD
Sbjct: 980  LRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDD 1039

Query: 538  TVFSTIVKKVADDGMTEEAYK 558
                 +V+ V  DG+  + YK
Sbjct: 1040 -----VVQAVLIDGLLRDGYK 1055



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 104/408 (25%), Positives = 196/408 (48%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           I+LI+     + + +    L ++  SG       Y+ ++  L + G   + +     M  
Sbjct: 319 IHLIKSCHSKEAMARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDRYHRMLS 378

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G +P+++ YN ++  +  +G    A    K        P   TYT +I   C++  +  
Sbjct: 379 EGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCRKHDLDS 438

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A++V + MA EGC P+ VTY++L+N  C  G+ ++A  +I  ++  G+ P + T    + 
Sbjct: 439 ALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMILHGILPTAHTCTGPII 498

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           +L   GC++   ++   M      P V+TY  LI+GLC  GL+  AI  F++M      P
Sbjct: 499 ALCDMGCYEDAWRLFVDMKNKGCEPNVYTYTALISGLCVSGLLKVAIGLFHRMSRDGVFP 558

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           + VTYN ++  L +   +  A  +L+L+  +     ++TYN +I G    G  +KAM++ 
Sbjct: 559 NTVTYNALINILVENRRIKYAFVVLNLMGRNGLFTNIVTYNEMIKGYCILGDPKKAMLVM 618

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M++ G S + +T+ T+I G+C +     A+ +L  +   G K    +Y  +I G CK 
Sbjct: 619 NNMLQRGHSANLVTYNTIIKGYCDSGNTTSALRILDLMRDGGCKPDEWSYTELICGFCKI 678

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            K++ A  +   M+     P++  ++ ++     D   + A  L + +
Sbjct: 679 SKMESAFGLFNEMVDDGLCPNEVTYTALIDGYCKDEKLDTATSLLEHM 726



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 162/363 (44%), Gaps = 30/363 (8%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            +E T   ++  +C   KL  A+ L++ M R    P+      LI GL + +    A ++ 
Sbjct: 699  NEVTYTALIDGYCKDEKLDTATSLLEHMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELC 758

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            ++M+  G  P+ +TY  M+ GLCK G    A+ + ++M   GC P+++TY++++R +   
Sbjct: 759  KVMIEEGIFPNVVTYTAMIDGLCKNGSTSLALEMFNKMIEQGCLPNLLTYSSLIRALGQE 818

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            GK ++A   + +  R G  P  ITY  +IE       +  A   L  M   GC P + TY
Sbjct: 819  GKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRMIKAGCQPTLWTY 878

Query: 296  NSLVNF--------------------SCKQGKY---DDAVLVINNLLSRGMEP--NSITY 330
              L+                      +C  G      DAV V++  L+  ++P  +    
Sbjct: 879  GVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLAE-LDPGLSVQVQ 937

Query: 331  NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
            N L+ +L + G W   +++L  M      P    YN L+  L +   VD A+  F  M +
Sbjct: 938  NALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVDLAMGVFKHMST 997

Query: 391  KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG---- 446
            + C+  +  Y  ++ ALC+     EA      +   + +P  +    LIDGL + G    
Sbjct: 998  QGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLIDGLLRDGYKDL 1057

Query: 447  CME 449
            CME
Sbjct: 1058 CME 1060



 Score = 67.8 bits (164), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 54/230 (23%), Positives = 99/230 (43%), Gaps = 19/230 (8%)

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           H + +RG    +D +L +  E SHS    T+  L   L        A  +   ++ K+C 
Sbjct: 272 HPIAARG----LDLLLFLSRERSHSYRPGTFAALARRLVDARRYAAAGRARIHLI-KSCH 326

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
                         KE M    +  L +L+ S     L  Y+ L+  L++ G     M  
Sbjct: 327 S-------------KEAM-ARTMSFLDMLSQSGLRMGLFAYSALLIHLSRLGMTAAVMDR 372

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y +M+  G+ P+ + +  +I   C+   V +A  ++K++ +         Y  +I G C+
Sbjct: 373 YHRMLSEGVQPNLLIYNAVINALCKDGNVADAETIMKKVFESEMSPDTFTYTSMILGHCR 432

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              +D A+QV   M     +P+   +ST++  + D G   EA+ L +++I
Sbjct: 433 KHDLDSALQVFNQMAKEGCEPNTVTYSTLINGLCDSGRVNEAFDLIREMI 482



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 59/274 (21%), Positives = 105/274 (38%), Gaps = 24/274 (8%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T + +++     GK+ +A  L   + R   IPD    + +I   I   ++E A   L  M
Sbjct: 807  TYSSLIRALGQEGKVEEAENLFAELERHGLIPDEITYVKMIEAYIMSGKVEHAFNFLGRM 866

Query: 179  VMSGGVPDTITYNMMVGGL--------------------CKRGQIRSAIALLDEMSVSGC 218
            + +G  P   TY +++ GL                    C  G   +    +  MS    
Sbjct: 867  IKAGCQPTLWTYGVLIKGLKNEYLLADQRLAALPDVVPNCSFGYQTTDQDAVSVMSAKLA 926

Query: 219  EPD----VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
            E D    V   N ++  +   G++ +A       + +G  P    Y  L+  + +   + 
Sbjct: 927  ELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGLCPDQEAYNSLLCSLLRVRNVD 986

Query: 275  RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
             A+ V   M+ +GC   +  Y  L+   C+  +  +A +   N+L R   P+ +    L+
Sbjct: 987  LAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARITFENMLMRTWNPDDVVQAVLI 1046

Query: 335  HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
              L   G  D   + L IM    + P+   Y IL
Sbjct: 1047 DGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTIL 1080



 Score = 39.3 bits (90), Expect = 5.7,   Method: Compositional matrix adjust.
 Identities = 38/182 (20%), Positives = 73/182 (40%), Gaps = 4/182 (2%)

Query: 128  CSRGKLTDASKLIDIMARRNQIPDFHFCIN----LIRGLIRIDRIEKASKVLQIMVMSGG 183
            CS G  T     + +M+ +    D    +     L+  L    R  +A+++L  M+  G 
Sbjct: 906  CSFGYQTTDQDAVSVMSAKLAELDPGLSVQVQNALVSNLSTAGRWFEANELLGSMISQGL 965

Query: 184  VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
             PD   YN ++  L +   +  A+ +   MS  GCE  +  Y  ++  +    + K+A  
Sbjct: 966  CPDQEAYNSLLCSLLRVRNVDLAMGVFKHMSTQGCEVHLNGYKELICALCQLHRRKEARI 1025

Query: 244  FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
             +++ L +   P  +   +LI+ + +       +E L  M      P    Y  L   + 
Sbjct: 1026 TFENMLMRTWNPDDVVQAVLIDGLLRDGYKDLCMEFLHIMETRRYMPSFHIYTILAREAS 1085

Query: 304  KQ 305
            K+
Sbjct: 1086 KK 1087


>gi|297737746|emb|CBI26947.3| unnamed protein product [Vitis vinifera]
          Length = 1078

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 200/374 (53%)

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           ++++    K+  +   +++ D+M  S   PDV   N ILR + D     +A+  ++    
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P ++TY  L++  CK   + + +++L +M   GC+P+ VTYN L+N   K+G+++ 
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  +I  +L  G++ ++ TYN L++   ++G       + + M     SPTV TYN  I 
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GLCK G +  A+   + M++ N  PD+V+YNT++   C+ G L +A  L   L      P
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            ++TYNTL+DGL ++G +E A  L  +M+  GI+PD +T+  L+ G C+   +  A +  
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+   G ++ + AY   I G  K      A  + E M++  + PD  +++ +V  +   
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527

Query: 551 GMTEEAYKLWQKLI 564
           G  EEA +L QK++
Sbjct: 528 GNLEEASELLQKMV 541



 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 218/436 (50%), Gaps = 2/436 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T N ++     +G+   A  LI  M +       +    LI G      + +A  + 
Sbjct: 268 NDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQ 327

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV+ G  P   TYN  + GLCK G++  A+  L +M  +   PDV++YNT++      
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387

Query: 236 GKFKQAIGFWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           G   +A   + D+LR     P ++TY  L++ +C+Q  +  A ++  +M  EG +PDIVT
Sbjct: 388 GNLMKAFLLF-DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVT 446

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y  LVN SCK G    A    + +L  G+E +S  Y T +      G       + + M 
Sbjct: 447 YTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEML 506

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P +  YN++++GLCK G ++ A     +MVS    PD VTY +++ A  + G L 
Sbjct: 507 AKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLR 566

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +  ++ + +     +P ++TY  LI G A KG +E+A + + +M E GI P+ IT+ +LI
Sbjct: 567 KGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLI 626

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+  ++++A +   E+ ++G      +Y ++I+  C       A+ + + M+    +
Sbjct: 627 NGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQ 686

Query: 535 PDDTVFSTIVKKVADD 550
           PD    S ++K++  D
Sbjct: 687 PDSCTHSALLKQLGKD 702



 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 210/427 (49%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           + D M +    PD   C  ++R L   D + KA +V + M   G  P  +TYN ++   C
Sbjct: 186 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 245

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K G+++  + LL EM   GC P+ +TYN ++  +   G+F+QA G   + L+ G      
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY  LI     +  +A A+ + ++M ++G SP + TYNS +   CK G+  DA+  ++++
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L+  + P+ ++YNTL++     G       + D +      PT+ TYN L++GLC+ G +
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 425

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + A     +M+++   PDIVTY  ++   CK G L+ A +    +           Y T 
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I G  K G   +A  L  +M+  G  PD I +  ++ G C+   +EEA +LL+++   G 
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 Y  +IH   ++ ++    ++   M+S    P    ++ ++   A  G  E A+ 
Sbjct: 546 IPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFI 605

Query: 559 LWQKLIE 565
            + ++ E
Sbjct: 606 YFSEMQE 612



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 58/242 (23%), Positives = 113/242 (46%), Gaps = 35/242 (14%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           S   +V   ++LI    K  +V++ ++ F++M+     PD+   N +L  L  + ++++A
Sbjct: 159 SSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKA 218

Query: 417 LQLLHLLNGSSCSPCLITYNTLID-----------------------------------G 441
           +++   +      P ++TYNTL+D                                   G
Sbjct: 219 VEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLING 278

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L+KKG  E+A  L G+M++ G+     T+  LI+G+     + EA+ L +E+  +G    
Sbjct: 279 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPT 338

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            + Y   I+GLCK  ++  A+Q L  M+++   PD   ++T++      G   +A+ L+ 
Sbjct: 339 VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 398

Query: 562 KL 563
           +L
Sbjct: 399 EL 400



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/166 (27%), Positives = 75/166 (45%), Gaps = 2/166 (1%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  V  D  T   I+      G+L    ++   M  +   P       LI G     R
Sbjct: 542 SDG--VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGR 599

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +E+A      M   G +P+ ITYN ++ GLCK  ++  A     EM   G  P+  +Y  
Sbjct: 600 LERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTI 659

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
           ++    + G +++A+  +K  L +G  P   T++ L++Q+ K C +
Sbjct: 660 LINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKL 705


>gi|302767030|ref|XP_002966935.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
 gi|300164926|gb|EFJ31534.1| hypothetical protein SELMODRAFT_87043 [Selaginella moellendorffii]
          Length = 428

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 130/416 (31%), Positives = 217/416 (52%), Gaps = 3/416 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N ++   C   K   A +L+ +MA             LI GL +   ++ A  +L
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M  +G  P+ +TY  ++ GLCK  +   AI  +  M  SGCEPD++TYN+++  +   
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 236 GKFKQA-IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            +   A +   +  +  G  P ++TY   I  +CK   + + +E+L++M   G SPD+VT
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           + S+++  CK  + DDA  V   +L RG  P+S+TY+ +L +L      D V+++L+ M 
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           ++ H     TY  LI+ L + G ++ A  ++ Q +   C  ++ T+N  +GALC+ G   
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFP 308

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-ISPDDITHRTL 473
            A  +L  +  S   P L++YN +IDGL K G ++ A  L  +M+++G   PD I   TL
Sbjct: 309 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTL 368

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKSKKVDMAIQVLELM 528
           I GFC+A ++ +A  LLKE+  +   + +   Y  +I G  K   +  A  +LE M
Sbjct: 369 ISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEM 424



 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 125/380 (32%), Positives = 193/380 (50%), Gaps = 2/380 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D   YN ++ GLCK  + R A+ LL  M+ +G +  V+TY T++  +  +G    A    
Sbjct: 9   DAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGDLDAAQALL 68

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           +     GC P ++TYT LI+ +CK      AI+ +  M   GC PD+VTYNSL++  C  
Sbjct: 69  QKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMA 128

Query: 306 GKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            + DDA LV+  L+   G  P+ +TYNT +  L   G  D   ++L+ M+    SP V T
Sbjct: 129 NRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVT 188

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           +  +I+GLCK   +D A   F  M+ + C PD +TY+ +L  L +   L+   ++L  + 
Sbjct: 189 FCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMV 248

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
            S       TY  LI  L + G +E A   Y Q ME G   +  TH   I   CR+ +  
Sbjct: 249 KSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFP 308

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR-YKPDDTVFSTI 543
            A ++L  + + G+     +Y  VI GLCKS  VD A ++   M+ S   KPD   F+T+
Sbjct: 309 LAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTL 368

Query: 544 VKKVADDGMTEEAYKLWQKL 563
           +      G   +A +L +++
Sbjct: 369 ISGFCKAGRLSQAQQLLKEM 388



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/347 (31%), Positives = 180/347 (51%), Gaps = 3/347 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ-I 177
           T   ++   C   +  DA + +  M R    PD     +LI GL   +R++ A  VLQ +
Sbjct: 82  TYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNSLIHGLCMANRMDDAGLVLQEL 141

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+ SG +PD +TYN  + GLCK G++   + +L+EM   G  PDV+T+ +I+  +    +
Sbjct: 142 MIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEMDRGGISPDVVTFCSIISGLCKANR 201

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A   +K  L +GC P  +TY+I+++ + +   +    EVL+ M   G      TY  
Sbjct: 202 IDDAFQVFKGMLERGCVPDSLTYSIMLDNLSRANRLDTVEEVLEHMVKSGHYALSATYAP 261

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++   + G  + A       +  G      T+N  + +L   G +     IL  M E+ 
Sbjct: 262 LIHALIRAGDIESASWAYEQAMEAGCVMEVYTHNAFIGALCRSGKFPLAKNILLGMIESG 321

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMV-SKNCQPDIVTYNTVLGALCKEGMLNEA 416
             P + +YN +I+GLCK G VD A     +M+ S  C+PD++ +NT++   CK G L++A
Sbjct: 322 SLPNLLSYNFVIDGLCKSGNVDDAWKLSRKMLDSGCCKPDVIFFNTLISGFCKAGRLSQA 381

Query: 417 LQLLHLLNGSS-CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
            QLL  +   + C P ++TYNT+IDG +K G +++A +L  +M   G
Sbjct: 382 QQLLKEMKAKNICVPDVVTYNTMIDGQSKFGSLKQAKLLLEEMQAVG 428



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 57/177 (32%), Positives = 99/177 (55%), Gaps = 1/177 (0%)

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M S++ + D   YNT++  LCK      AL+LLH++  +     ++TY TLIDGL K G 
Sbjct: 1   MASRHFRLDAAIYNTLIAGLCKARKPRHALELLHVMAANGYDASVVTYTTLIDGLCKSGD 60

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           ++ A  L  +M + G +P+ +T+  LI G C+A +  +A+  +K + + G +     Y  
Sbjct: 61  LDAAQALLQKMADAGCAPNVVTYTALIDGLCKARRPHDAIQTVKRMLRSGCEPDLVTYNS 120

Query: 508 VIHGLCKSKKVDMAIQVL-ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +IHGLC + ++D A  VL ELMI S   PD   ++T +  +   G  ++  ++ +++
Sbjct: 121 LIHGLCMANRMDDAGLVLQELMIESGRIPDVVTYNTFISGLCKAGKLDKGLEMLEEM 177



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 64/252 (25%), Positives = 118/252 (46%), Gaps = 2/252 (0%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L   D   +  D  T   I+   C   ++ DA ++   M  R  +PD      ++  L R
Sbjct: 174 LEEMDRGGISPDVVTFCSIISGLCKANRIDDAFQVFKGMLERGCVPDSLTYSIMLDNLSR 233

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
            +R++   +VL+ MV SG    + TY  ++  L + G I SA    ++   +GC  +V T
Sbjct: 234 ANRLDTVEEVLEHMVKSGHYALSATYAPLIHALIRAGDIESASWAYEQAMEAGCVMEVYT 293

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           +N  +  +  +GKF  A       +  G  P L++Y  +I+ +CK   +  A ++   M 
Sbjct: 294 HNAFIGALCRSGKFPLAKNILLGMIESGSLPNLLSYNFVIDGLCKSGNVDDAWKLSRKML 353

Query: 285 IEG-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM-EPNSITYNTLLHSLGSRGC 342
             G C PD++ +N+L++  CK G+   A  ++  + ++ +  P+ +TYNT++      G 
Sbjct: 354 DSGCCKPDVIFFNTLISGFCKAGRLSQAQQLLKEMKAKNICVPDVVTYNTMIDGQSKFGS 413

Query: 343 WDAVDKILDIMN 354
                 +L+ M 
Sbjct: 414 LKQAKLLLEEMQ 425


>gi|357110839|ref|XP_003557223.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Brachypodium distachyon]
          Length = 897

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 227/470 (48%), Gaps = 35/470 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +   G +  A++++ +M      P    C  L++ L+R D +E   K+   M  +G
Sbjct: 181 LVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEGAG 240

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY+  +   CK     +A  + +EM    C  + +TYN ++  +  +G  ++A 
Sbjct: 241 IPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEEAF 300

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           GF ++ +  G  P   TY  L+  +CK   +  A  +LD+M+  G  P++V Y +LV+  
Sbjct: 301 GFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGF 360

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+GK  +A  ++N ++S G++PN I Y+ L+  L   G      K+L+ M +  H P  
Sbjct: 361 MKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDT 420

Query: 363 FTYN-----------------------------------ILINGLCKYGLVDRAINSFNQ 387
           FTY+                                   I+INGLC+ G    A N   +
Sbjct: 421 FTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEE 480

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M+S+  +P+   Y  ++    KEG ++ A + L  +  ++  P L  YN+LI GL+  G 
Sbjct: 481 MISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGR 540

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +E+A   Y Q+ + G+ PD+ T+  LI G+C+   +E+A  LL+++   G K     Y  
Sbjct: 541 IEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTD 600

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           ++ G  KS   +    +L+ M+ S  KPD+ ++  +++ ++     E A+
Sbjct: 601 LLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAF 650



 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 222/456 (48%), Gaps = 2/456 (0%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDR 167
           +G  +  D  T +  L+  C       A K+ + M RR+  + +  + + +I GL R   
Sbjct: 237 EGAGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNV-MISGLCRSGA 295

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +E+A    + MV  G  PD  TY  ++ GLCK G+++ A ALLDEMS SG +P+V+ Y T
Sbjct: 296 VEEAFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYAT 355

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++      GK  +A     + +  G  P  I Y  LI  +CK   + RA ++L++M   G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD  TY+ L+    +    D A  ++N + + G+ PN+ TY  +++ L   G      
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            +L+ M      P  F Y  LI G  K G +  A  S   M   N  PD+  YN+++  L
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
              G + EA +    +      P   TY+ LI G  K   +EKA  L  QM+ +G+ P+ 
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T+  L+ G+ +++  E+   +L+ +   G+K  N  Y +VI  L +S+ +++A  VL  
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +  +   PD  ++S+++  +      E+A  L  ++
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEM 691



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 119/488 (24%), Positives = 226/488 (46%), Gaps = 36/488 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + +++  C  G+L  ASKL++ M +    PD      L++G  +    + A ++L  M  
Sbjct: 389 DNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRN 448

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG----------------------- 217
           SG +P+  TY +M+ GLC+ G+ + A  LL+EM   G                       
Sbjct: 449 SGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMYAPLIIGHSKEGHISL 508

Query: 218 -CE-----------PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
            CE           PD+  YN++++ +   G+ ++A  ++    ++G  P   TY+ LI 
Sbjct: 509 ACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIH 568

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             CK   + +A ++L  M   G  P+  TY  L+    K   ++    ++ ++L  G +P
Sbjct: 569 GYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKP 628

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           ++  Y  ++ +L      +    +L  + +    P +  Y+ LI+GLCK   +++A+   
Sbjct: 629 DNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLL 688

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           ++M  +  +P IV YN ++   C+ G ++ A  +   +      P  +TY  LIDG  K 
Sbjct: 689 DEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKN 748

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G +  A  LY  M++ GI+PD   +  L  G   A  +E+A+ L +E+  RG     S +
Sbjct: 749 GDITDAFDLYKDMLDRGIAPDAFVYNVLATGCSDAADLEQALFLTEEMFNRGYA-HVSLF 807

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             ++ G CK  ++    ++L +M+     P+      ++ +    G   EA++++ +L +
Sbjct: 808 STLVRGFCKRGRLQETEKLLHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQ 867

Query: 566 WKVFEKGT 573
            K  +  T
Sbjct: 868 KKASQSST 875



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 213/450 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G+L +A  L+D M+     P+      L+ G ++  +  +A  +L
Sbjct: 314 DAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVDGFMKEGKAAEAFDIL 373

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ +G  P+ I Y+ ++ GLCK GQ+  A  LL+EM   G  PD  TY+ +++  F +
Sbjct: 374 NEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVGHRPDTFTYHPLMQGHFQH 433

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A     +    G  P   TY I+I  +C+      A  +L++M  EG  P+   Y
Sbjct: 434 YDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAGNLLEEMISEGLKPNAFMY 493

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+    K+G    A   + N+    + P+   YN+L+  L + G  +  ++    + +
Sbjct: 494 APLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGLSTVGRIEEAEEYYAQVQK 553

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P  FTY+ LI+G CK   +++A     QM++   +P+  TY  +L    K     +
Sbjct: 554 RGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNADTYTDLLEGYFKSNDHEK 613

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
              +L  + GS   P    Y  +I  L++   ME A ++  ++ +NG+ PD   + +LI 
Sbjct: 614 VSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTEVEKNGLVPDLHIYSSLIS 673

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+   +E+AV LL E+ K G +     Y  +I G C+S  +  A  V + +++    P
Sbjct: 674 GLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGDISRARNVFDSILAKGLLP 733

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +   ++ ++     +G   +A+ L++ +++
Sbjct: 734 NCVTYTALIDGNCKNGDITDAFDLYKDMLD 763



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 224/488 (45%), Gaps = 36/488 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   GK  +A  +++ M      P+     NLIRGL +I ++ +ASK+L  M+  G
Sbjct: 356 LVDGFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIKVG 415

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PDT TY+ ++ G  +      A  LL+EM  SG  P+  TY  ++  +  NG+ K+A 
Sbjct: 416 HRPDTFTYHPLMQGHFQHYDKDGAFELLNEMRNSGILPNAYTYGIMINGLCQNGESKEAG 475

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++ + +G  P    Y  LI    K+  I+ A E L++M      PD+  YNSL+   
Sbjct: 476 NLLEEMISEGLKPNAFMYAPLIIGHSKEGHISLACESLENMTKANVLPDLFCYNSLIKGL 535

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
              G+ ++A      +  RG+ P+  TY+ L+H        +  D++L  M  +   P  
Sbjct: 536 STVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLNSGLKPNA 595

Query: 363 FTYNILINGLCK-------------------------YGLVDRAINSFNQM--------- 388
            TY  L+ G  K                         YG+V R ++    M         
Sbjct: 596 DTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEVAFMVLTE 655

Query: 389 VSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           V KN   PD+  Y++++  LCK   + +A+ LL  +      P ++ YN LIDG  + G 
Sbjct: 656 VEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALIDGFCRSGD 715

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           + +A  ++  ++  G+ P+ +T+  LI G C+   + +A DL K++  RG       Y +
Sbjct: 716 ISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGIAPDAFVYNV 775

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +  G   +  ++ A+ + E M +  Y    ++FST+V+     G  +E  KL   +++ +
Sbjct: 776 LATGCSDAADLEQALFLTEEMFNRGYA-HVSLFSTLVRGFCKRGRLQETEKLLHVMMDRE 834

Query: 568 VFEKGTTL 575
           +     T+
Sbjct: 835 IVPNAQTV 842



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 93/356 (26%), Positives = 172/356 (48%), Gaps = 3/356 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++   + G++ +A +    + +R  +PD      LI G  +   +EKA ++LQ M+ 
Sbjct: 529 NSLIKGLSTVGRIEEAEEYYAQVQKRGLVPDEFTYSGLIHGYCKTRNLEKADQLLQQMLN 588

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           SG  P+  TY  ++ G  K        ++L  M  SG +PD   Y  ++R +  +   + 
Sbjct: 589 SGLKPNADTYTDLLEGYFKSNDHEKVSSILQSMLGSGDKPDNHIYGIVIRNLSRSENMEV 648

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     +  + G  P L  Y+ LI  +CK   + +A+ +LD+MA EG  P IV YN+L++
Sbjct: 649 AFMVLTEVEKNGLVPDLHIYSSLISGLCKMADMEKAVGLLDEMAKEGLEPGIVCYNALID 708

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHS 359
             C+ G    A  V +++L++G+ PN +TY  L+      G   DA D   D+++    +
Sbjct: 709 GFCRSGDISRARNVFDSILAKGLLPNCVTYTALIDGNCKNGDITDAFDLYKDMLDRGI-A 767

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P  F YN+L  G      +++A+    +M ++     +  ++T++   CK G L E  +L
Sbjct: 768 PDAFVYNVLATGCSDAADLEQALFLTEEMFNRG-YAHVSLFSTLVRGFCKRGRLQETEKL 826

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           LH++      P   T   +I    K G + +A  ++ ++ +   S       +L++
Sbjct: 827 LHVMMDREIVPNAQTVENVITEFGKAGKLCEAHRVFAELQQKKASQSSTDRFSLLF 882



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 60/235 (25%), Positives = 111/235 (47%)

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           + L+ +    G      +++ +M +   +PT    N L+  L +   ++        M  
Sbjct: 179 DVLVDTYKKNGSVRTAAQVVLMMGDLGLAPTRRCCNGLLKDLLRADAMELVWKLKGFMEG 238

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
               PD+ TY+T L A CK    + A ++   +    C+   +TYN +I GL + G +E+
Sbjct: 239 AGIPPDVYTYSTFLEAHCKARDFDAAKKVFEEMRRRDCAMNEVTYNVMISGLCRSGAVEE 298

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A     +M++ G+SPD  T+  L+ G C+  +++EA  LL E+   G K     Y  ++ 
Sbjct: 299 AFGFKEEMVDYGLSPDAFTYGALMNGLCKGGRLKEAKALLDEMSCSGLKPNVVVYATLVD 358

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           G  K  K   A  +L  MIS+  +P+  ++  +++ +   G    A KL  ++I+
Sbjct: 359 GFMKEGKAAEAFDILNEMISAGVQPNKIMYDNLIRGLCKIGQLGRASKLLNEMIK 413


>gi|297803282|ref|XP_002869525.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297315361|gb|EFH45784.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 707

 Score =  207 bits (528), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 119/423 (28%), Positives = 221/423 (52%), Gaps = 2/423 (0%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M   +   +F     L+   +++ +   A  VL +M+  G   +   YN+++ GLC+  +
Sbjct: 98  MLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLE 157

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
              A++LL EM  +   PDV++YNT++R   +  + ++A+    +    GC   L+T+ I
Sbjct: 158 FGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQGSGCSWSLVTWGI 217

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI+  CK   +  A+ +L +M  +G   D++ Y SL+   C  G+ D    + + +L RG
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             P +ITYNTL+      G      +I + M E    P V+TY  LI+GLC  G    A+
Sbjct: 278 DSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
              N M+ K+ +P++VTYN ++  LCK+ ++ +AL+++ L+      P  ITYN+L+ GL
Sbjct: 338 QLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGL 397

Query: 443 AKKGCMEKAMVLYGQMMENG--ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
             KG +++A  L   M+++     PD I+   LI G C+ +++ +A+D+   + ++    
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALDIYDLLVEKLGAG 457

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
                 ++++   KS  V+ A+++ + + +S+  P+   ++T++      GM   A  L 
Sbjct: 458 DIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLL 517

Query: 561 QKL 563
            K+
Sbjct: 518 CKM 520



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 134/450 (29%), Positives = 230/450 (51%), Gaps = 6/450 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC  GK+ +A  L+  M  +    D     +LIRG      +++   +   ++  G
Sbjct: 218 LIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P  ITYN ++ G CK G+++ A  + + M   G  P+V TY  ++  +   GK K+A+
Sbjct: 278 DSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 L+K   P ++TY I+I ++CK   +A A+E+++ M      PD +TYNSL+   
Sbjct: 338 QLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGL 397

Query: 303 CKQGKYDDAVLVINNLL--SRGMEPNSITYNTLLHSL--GSRGCWDAVDKILDIMNEASH 358
           C +G  D+A  ++  +L  S   +P+ I++N L+H L  G+R    A+D I D++ E   
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNR-LHQALD-IYDLLVEKLG 455

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +  + T NIL+N   K G V++A+  + Q+ +    P+  TY T++   CK GMLN A  
Sbjct: 456 AGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKG 515

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +  S   P +  YN L+  L KKG +++A  L+ +M  +   PD I+   +I G  
Sbjct: 516 LLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSL 575

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A  ++ A  LL  +   G       Y  +I+   K   +D AI   + MI S ++PD  
Sbjct: 576 KAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAH 635

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +  +++K     G T++  +  +KL++  V
Sbjct: 636 ICDSVLKYCISQGETDKLTEFVKKLVDKDV 665



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/428 (29%), Positives = 214/428 (50%), Gaps = 6/428 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L+  C   +   A  L+  M + + +PD      +IRG      +EKA ++   M  
Sbjct: 146 NILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKALQLANEMQG 205

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           SG     +T+ +++   CK G++  A+ LL EM   G E D+I Y +++R   D G+  +
Sbjct: 206 SGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDR 265

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               + + L +G  P  ITY  LI   CK   +  A E+ + M   G  P++ TY  L++
Sbjct: 266 GKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLID 325

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  GK  +A+ ++N +L +  EPN +TYN +++ L          +I+++M +    P
Sbjct: 326 GLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRP 385

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMV--SKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              TYN L+ GLC  G +D A      M+  S    PD++++N ++  LCK   L++AL 
Sbjct: 386 DNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQALD 445

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +  LL     +  ++T N L++   K G + KAM L+ Q+  + I P+  T+ T+I GFC
Sbjct: 446 IYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFC 505

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSA--YRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +   +  A  LL ++  R +++  S   Y  ++  LCK   +D A ++ E M      PD
Sbjct: 506 KTGMLNVAKGLLCKM--RLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPD 563

Query: 537 DTVFSTIV 544
              F+ ++
Sbjct: 564 VISFNIMI 571



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 191/371 (51%), Gaps = 6/371 (1%)

Query: 98  KKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN 157
           K   D  L   D P       T N +++ FC  G+L +AS++ + M  R   P+ +    
Sbjct: 267 KALFDEVLERGDSPCA----ITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTG 322

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL  + + ++A ++L +M+     P+ +TYN+++  LCK   +  A+ +++ M    
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRR 382

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC--PPYLITYTILIEQVCKQCGIAR 275
             PD ITYN++L  +   G   +A       L+      P +I++  LI  +CK   + +
Sbjct: 383 TRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCKGNRLHQ 442

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+++ D +  +  + DIVT N L+N + K G  + A+ +   + +  + PNS TY T++ 
Sbjct: 443 ALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMID 502

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                G  +    +L  M  +   P+VF YN L++ LCK G +D+A   F +M   +  P
Sbjct: 503 GFCKTGMLNVAKGLLCKMRLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFP 562

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D++++N ++    K G +  A  LL  ++ +  SP L TY+ LI+   K G +++A+  +
Sbjct: 563 DVISFNIMIDGSLKAGDIKSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622

Query: 456 GQMMENGISPD 466
            +M+++G  PD
Sbjct: 623 DKMIDSGFEPD 633



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/420 (25%), Positives = 205/420 (48%), Gaps = 2/420 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           NL+  L+R    E A    + M+ +    + ++ + ++    +  +   A  +L  M   
Sbjct: 77  NLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLKR 136

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G   +V  YN +L+ +  N +F +A+   ++  +    P +++Y  +I   C+   + +A
Sbjct: 137 GFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEKA 196

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           +++ ++M   GCS  +VT+  L++  CK GK D+A+ ++  +  +G+E + I Y +L+  
Sbjct: 197 LQLANEMQGSGCSWSLVTWGILIDAFCKAGKMDEAMGLLKEMKHKGLEADLIVYTSLIRG 256

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               G  D    + D + E   SP   TYN LI G CK G +  A   F  M+ +  +P+
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGRLKEASEIFEFMMERGVRPN 316

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           + TY  ++  LC  G   EALQLL+L+      P ++TYN +I+ L K   +  A+ +  
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMLQKDEEPNVVTYNIIINKLCKDSLVADALEIVE 376

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCK 514
            M +    PD+IT+ +L+ G C    ++EA  LL  + K  +       ++  +IHGLCK
Sbjct: 377 LMKKRRTRPDNITYNSLLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISFNALIHGLCK 436

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             ++  A+ + +L++      D    + ++      G   +A +LW+++   K+     T
Sbjct: 437 GNRLHQALDIYDLLVEKLGAGDIVTTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDT 496



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 96/363 (26%), Positives = 181/363 (49%), Gaps = 11/363 (3%)

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           Q+++A+++  +   SG        N ++ T+  +   + A  F++  L        ++ +
Sbjct: 53  QLKNAVSVFQQAVDSGGSLS-FAGNNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLS 111

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            L+E   +      A  VL  M   G + ++  YN L+   C+  ++  AV ++  +   
Sbjct: 112 GLLECFVQMRKTGFAHGVLALMLKRGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQN 171

Query: 322 GMEPNSITYNTLLHSLGSRGCWDA--VDKILDIMNEASHSP---TVFTYNILINGLCKYG 376
            + P+ ++YNT++     RG  +   ++K L + NE   S    ++ T+ ILI+  CK G
Sbjct: 172 SLMPDVVSYNTVI-----RGFCEGKELEKALQLANEMQGSGCSWSLVTWGILIDAFCKAG 226

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +D A+    +M  K  + D++ Y +++   C  G L+    L   +     SPC ITYN
Sbjct: 227 KMDEAMGLLKEMKHKGLEADLIVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           TLI G  K G +++A  ++  MME G+ P+  T+  LI G C   + +EA+ LL  + ++
Sbjct: 287 TLIRGFCKLGRLKEASEIFEFMMERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMLQK 346

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
             +     Y ++I+ LCK   V  A++++ELM   R +PD+  +++++  +   G  +EA
Sbjct: 347 DEEPNVVTYNIIINKLCKDSLVADALEIVELMKKRRTRPDNITYNSLLGGLCAKGDLDEA 406

Query: 557 YKL 559
            KL
Sbjct: 407 SKL 409



 Score = 76.6 bits (187), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 57/238 (23%), Positives = 100/238 (42%), Gaps = 1/238 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L +    G +  A +L   ++    +P+      +I G  +   +  A  +L  M
Sbjct: 461 TTNILLNSTLKSGDVNKAMELWKQISNSKIVPNSDTYTTMIDGFCKTGMLNVAKGLLCKM 520

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +S   P    YN ++  LCK+G +  A  L +EM      PDVI++N ++      G  
Sbjct: 521 RLSELPPSVFDYNCLLSSLCKKGTLDQAWRLFEEMQRDDSFPDVISFNIMIDGSLKAGDI 580

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K A          G  P L TY+ LI +  K   +  AI   D M   G  PD    +S+
Sbjct: 581 KSAESLLVGMSHAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMIDSGFEPDAHICDSV 640

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPN-SITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + +   QG+ D     +  L+ + +  +  +T   + +   S G  D   ++L + ++
Sbjct: 641 LKYCISQGETDKLTEFVKKLVDKDVVLDKELTCTVMDYMCSSSGNMDIAKRLLRVADD 698



 Score = 40.4 bits (93), Expect = 2.6,   Method: Compositional matrix adjust.
 Identities = 28/128 (21%), Positives = 59/128 (46%)

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           N L+  L +    E A   Y +M+E     + ++   L+  F +  +   A  +L  + K
Sbjct: 76  NNLMATLVRSRNHEVAFSFYRKMLETDTFINFVSLSGLLECFVQMRKTGFAHGVLALMLK 135

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           RG       Y +++ GLC++ +   A+ +L  M  +   PD   ++T+++   +    E+
Sbjct: 136 RGFAFNVYNYNILLKGLCRNLEFGKAVSLLREMRQNSLMPDVVSYNTVIRGFCEGKELEK 195

Query: 556 AYKLWQKL 563
           A +L  ++
Sbjct: 196 ALQLANEM 203


>gi|242070015|ref|XP_002450284.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
 gi|241936127|gb|EES09272.1| hypothetical protein SORBIDRAFT_05g003220 [Sorghum bicolor]
          Length = 727

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/449 (29%), Positives = 220/449 (48%), Gaps = 2/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T N ++      G L +A+KL+D M    +   F +   LI  L+    ++K   + 
Sbjct: 279 NDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSFTYN-PLITALLERGFVQKVEALQ 337

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G +P  +TYN ++ GL K  Q+ +A     EM   G  PD+ITYN++L      
Sbjct: 338 MEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKA 397

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  K+A+    D  R G  P ++TY  LI+  C+  G+  A  + ++M  +GC PD+ TY
Sbjct: 398 GNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTY 457

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+N S K      A    + +LS+G++P+   YNT + +    G      ++ ++M  
Sbjct: 458 TILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMML 517

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TYN++I+GLCK G +  A +   +MVS   QPD +TY  ++ A C+ G+L+E
Sbjct: 518 KGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSE 577

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +LL+ +      P ++TY  LI    ++G +  A   + +M++ GI P++IT+  LI 
Sbjct: 578 ARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIH 637

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             CR  +   A     E+ +RG       Y L+I G C+      AI++   M  +   P
Sbjct: 638 ALCRTGRTLLAYHHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRLYFEMHQNGIPP 697

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           D    + + K   D G    A +  + ++
Sbjct: 698 DYCTHNALFKGF-DKGHMYHAIEYLENIV 725



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 123/441 (27%), Positives = 215/441 (48%), Gaps = 9/441 (2%)

Query: 133 LTDASKLIDIMARRNQI------PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG--V 184
           L DA++  D+ A   ++      P       L+   ++  R ++AS +L+ M   GG  +
Sbjct: 218 LRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDEASMLLKEMETQGGGCL 277

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
            + +TYN+++  L + G + +A  L+D M +S  +    TYN ++  + + G  ++    
Sbjct: 278 LNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-KASSFTYNPLITALLERGFVQKVEAL 336

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
             +   +G  P L+TY  +I  + K   +  A     +M   G  PD++TYNS++N  CK
Sbjct: 337 QMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCK 396

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            G   +A+ ++ +L   G+ P  +TYNTL+      G  +   ++ + M E    P V T
Sbjct: 397 AGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCT 456

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y IL+NG  K   +  A   F++M+SK  QPD   YNT + A    G  ++A QL  ++ 
Sbjct: 457 YTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCFAYNTRICAELILGDTHKAFQLREVMM 516

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P  +TYN +IDGL K G ++ A  L  +M+ +G+ PD IT+  LI   C    + 
Sbjct: 517 LKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLS 576

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  LL  +   G +     Y ++IH  C+   +  A      M+    +P++  ++ ++
Sbjct: 577 EARKLLNGMVSDGLQPSVVTYTILIHTCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLI 636

Query: 545 KKVADDGMTEEAYKLWQKLIE 565
             +   G T  AY  + +++E
Sbjct: 637 HALCRTGRTLLAYHHFHEMLE 657



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 205/448 (45%), Gaps = 5/448 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQ---IPDFHFCINLIRGLIRIDRIEKASKVL 175
           T N +L +F   G+  +AS L+  M  +     + D  + + +I  L R   +E A+K++
Sbjct: 245 TYNTLLDSFLKEGRKDEASMLLKEMETQGGGCLLNDVTYNV-VISFLAREGHLENAAKLV 303

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M +S     + TYN ++  L +RG ++   AL  EM   G  P ++TYN I+  +  +
Sbjct: 304 DSMRLSKKA-SSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKS 362

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + + A   + +    G  P LITY  ++   CK   +  A+ +L D+   G +P ++TY
Sbjct: 363 EQVEAAQLKFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTY 422

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  C+ G  ++A  +   ++ +G  P+  TY  L++            +  D M  
Sbjct: 423 NTLIDGYCRLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLS 482

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P  F YN  I      G   +A      M+ K   PD VTYN ++  LCK G L +
Sbjct: 483 KGLQPDCFAYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKD 542

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   +      P  ITY  LI    ++G + +A  L   M+ +G+ P  +T+  LI 
Sbjct: 543 AKDLKMKMVSDGLQPDCITYTCLIHAHCERGLLSEARKLLNGMVSDGLQPSVVTYTILIH 602

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             CR   +  A    +++   G +     Y ++IH LC++ +  +A      M+     P
Sbjct: 603 TCCRRGNLYSAYGWFRKMLDVGIEPNEITYNVLIHALCRTGRTLLAYHHFHEMLERGLAP 662

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +   ++ ++     +G   +A +L+ ++
Sbjct: 663 NKYTYTLLIDGNCREGNWADAIRLYFEM 690



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/361 (29%), Positives = 183/361 (50%), Gaps = 5/361 (1%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           +A    ++  G  PDV   N +LR + D  ++      +++ L+    P ++TY  L++ 
Sbjct: 193 LAAFRVVACHGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDS 252

Query: 267 VCKQCGIARAIEVLDDMAIE--GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL-LSRGM 323
             K+     A  +L +M  +  GC  + VTYN +++F  ++G  ++A  +++++ LS+  
Sbjct: 253 FLKEGRKDEASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSK-- 310

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           + +S TYN L+ +L  RG    V+ +   M      PT+ TYN +I+GL K   V+ A  
Sbjct: 311 KASSFTYNPLITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQL 370

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +M +    PD++TYN++L   CK G L EAL LL  L  +  +P ++TYNTLIDG  
Sbjct: 371 KFAEMRAMGLLPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 430

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           + G +E+A  L  +M+E G  PD  T+  L+ G  +   +  A +   E+  +G +    
Sbjct: 431 RLGGLEEARRLKEEMVEQGCFPDVCTYTILMNGSHKVRNLPMAREFFDEMLSKGLQPDCF 490

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           AY   I           A Q+ E+M+     PD   ++ I+  +   G  ++A  L  K+
Sbjct: 491 AYNTRICAELILGDTHKAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKDLKMKM 550

Query: 564 I 564
           +
Sbjct: 551 V 551



 Score = 96.7 bits (239), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 118/251 (47%), Gaps = 3/251 (1%)

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G+ P+    N +L  L     WD V  +   M +    PT+ TYN L++   K G  D 
Sbjct: 202 HGVAPDVRDCNCVLRVLRDAARWDDVRAVYREMLQLEIEPTIVTYNTLLDSFLKEGRKDE 261

Query: 381 AINSFNQMVSKN--CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           A     +M ++   C  + VTYN V+  L +EG L  A +L+  +  S  +    TYN L
Sbjct: 262 ASMLLKEMETQGGGCLLNDVTYNVVISFLAREGHLENAAKLVDSMRLSKKASSF-TYNPL 320

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I  L ++G ++K   L  +M   GI P  +T+  +I G  +++QVE A     E+   G 
Sbjct: 321 ITALLERGFVQKVEALQMEMENEGIMPTLVTYNAIIHGLLKSEQVEAAQLKFAEMRAMGL 380

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 Y  +++G CK+  +  A+ +L  +  +   P    ++T++      G  EEA +
Sbjct: 381 LPDLITYNSMLNGYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGGLEEARR 440

Query: 559 LWQKLIEWKVF 569
           L ++++E   F
Sbjct: 441 LKEEMVEQGCF 451


>gi|334182516|ref|NP_172730.3| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
 gi|332190794|gb|AEE28915.1| helicase domain and pentatricopeptide repeat-containing protein
           [Arabidopsis thaliana]
          Length = 735

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 208/395 (52%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  VL  ++  G  PDT T+N ++ GL   G++  A+ L+D M  +GC+PDV+TYN+I+ 
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +  +G    A+   +    +     + TY+ +I+ +C+   I  AI +  +M  +G   
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            +VTYNSLV   CK GK++D  L++ +++SR + PN IT+N LL      G     +++ 
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M     SP + TYN L++G C    +  A N  + MV   C PDIVT+ +++   C  
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             +++ +++   ++        +TY+ L+ G  + G ++ A  L+ +M+ +G+ PD +T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             L+ G C   ++E+A+++ +++ K    +    Y  +I G+CK  KV+ A  +   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              KP+   ++ ++  +   G   EA  L +K+ E
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536



 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/410 (31%), Positives = 200/410 (48%), Gaps = 4/410 (0%)

Query: 112 FVEN----DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
            VEN    D  T N I+   C  G  + A  L+  M  RN   D      +I  L R   
Sbjct: 184 MVENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGC 243

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I+ A  + + M   G     +TYN +V GLCK G+      LL +M      P+VIT+N 
Sbjct: 244 IDAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNV 303

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           +L      GK ++A   +K+ + +G  P +ITY  L++  C Q  ++ A  +LD M    
Sbjct: 304 LLDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNK 363

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           CSPDIVT+ SL+   C   + DD + V  N+  RG+  N++TY+ L+      G     +
Sbjct: 364 CSPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAE 423

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M      P V TY IL++GLC  G +++A+  F  +        IV Y T++  +
Sbjct: 424 ELFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGM 483

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CK G + +A  L   L      P ++TY  +I GL KKG + +A +L  +M E+G +P+D
Sbjct: 484 CKGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPND 543

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
            T+ TLI    R   +  +  L++E+   G     S+ ++VI  L  + K
Sbjct: 544 CTYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDMLLSAMK 593



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 221/445 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC   K   A  ++  + +    PD      LI+GL    ++ +A  ++  M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V +G  PD +TYN +V G+C+ G    A+ LL +M     + DV TY+TI+ ++  +G  
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI  +K+   KG    ++TY  L+  +CK         +L DM      P+++T+N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK  +A  +   +++RG+ PN ITYNTL+     +      + +LD+M     
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP + T+  LI G C    VD  +  F  +  +    + VTY+ ++   C+ G +  A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P ++TY  L+DGL   G +EKA+ ++  + ++ +    + + T+I G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +VE+A +L   +  +G K     Y ++I GLCK   +  A  +L  M      P+D 
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++T+++    DG    + KL +++
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 228/435 (52%), Gaps = 6/435 (1%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTI 188
           K  DA  L   M R   +P     ++  R    I R ++ + VL     + ++G   +  
Sbjct: 68  KKDDAIALFQEMIRSRPLPSL---VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY 124

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T N+M+   C+  +   A ++L ++   G EPD  T+NT+++ +F  GK  +A+      
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  GC P ++TY  ++  +C+    + A+++L  M       D+ TY+++++  C+ G  
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           D A+ +   + ++G++ + +TYN+L+  L   G W+    +L  M      P V T+N+L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           ++   K G +  A   + +M+++   P+I+TYNT++   C +  L+EA  +L L+  + C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           SP ++T+ +LI G      ++  M ++  + + G+  + +T+  L+ GFC++ +++ A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L +E+   G       Y +++ GLC + K++ A+++ E +  S+      +++TI++ + 
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 549 DDGMTEEAYKLWQKL 563
             G  E+A+ L+  L
Sbjct: 485 KGGKVEDAWNLFCSL 499



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 215/431 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N +++     GK+++A  L+D M      PD     +++ G+ R      A  
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ M       D  TY+ ++  LC+ G I +AI+L  EM   G +  V+TYN+++R + 
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK+       KD + +   P +IT+ +L++   K+  +  A E+  +M   G SP+I+
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L++  C Q +  +A  +++ ++     P+ +T+ +L+         D   K+   +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           ++        TY+IL+ G C+ G +  A   F +MVS    PD++TY  +L  LC  G L
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +AL++   L  S     ++ Y T+I+G+ K G +E A  L+  +   G+ P+ +T+  +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+   + EA  LL+++ + GN   +  Y  +I    +   +  + +++E M S  +
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574

Query: 534 KPDDTVFSTIV 544
             D +    ++
Sbjct: 575 SADASSIKMVI 585



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 178/368 (48%), Gaps = 12/368 (3%)

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDV-------ITYNTILRTMFDNGKFKQAIGFWKDQL 249
           L K G +R+ +        S CE D        + +   LR+   + K   AI  +++ +
Sbjct: 21  LLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMI 80

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R    P L+ ++     + +       ++    + + G + +I T N ++N  C+  K  
Sbjct: 81  RSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTC 140

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A  V+  ++  G EP++ T+NTL+  L   G       ++D M E    P V TYN ++
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIV 200

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           NG+C+ G    A++   +M  +N + D+ TY+T++ +LC++G ++ A+ L   +      
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
             ++TYN+L+ GL K G      +L   M+   I P+ IT   L+  F +  +++EA +L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK---- 545
            KE+  RG       Y  ++ G C   ++  A  +L+LM+ ++  PD   F++++K    
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 546 -KVADDGM 552
            K  DDGM
Sbjct: 381 VKRVDDGM 388


>gi|334188438|ref|NP_200395.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332009303|gb|AED96686.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 1136

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 226/487 (46%), Gaps = 36/487 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N ++ + C   ++     L+  M +R   P+      LI G     ++  AS
Sbjct: 299 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 358

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+  G  P+ +T+N ++ G    G  + A+ +   M   G  P  ++Y  +L  +
Sbjct: 359 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 418

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N +F  A GF+    R G     ITYT +I+ +CK   +  A+ +L++M+ +G  PDI
Sbjct: 419 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 478

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY++L+N  CK G++  A  ++  +   G+ PN I Y+TL+++    GC     +I + 
Sbjct: 479 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 538

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVD--------------------------------- 379
           M    H+   FT+N+L+  LCK G V                                  
Sbjct: 539 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 598

Query: 380 --RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
             +A + F++M      P   TY ++L  LCK G L EA + L  L+    +   + YNT
Sbjct: 599 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 658

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           L+  + K G + KA+ L+G+M++  I PD  T+ +LI G CR  +   A+   KE   RG
Sbjct: 659 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 718

Query: 498 NKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           N + N   Y   + G+ K+ +    I   E M +  + PD    + ++   +  G  E+ 
Sbjct: 719 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 778

Query: 557 YKLWQKL 563
             L  ++
Sbjct: 779 NDLLPEM 785



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 220/443 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +   G + D+ ++  +M      P  + C  ++  +++          L+ M+   
Sbjct: 169 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 228

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  T+N+++  LC  G    +  L+ +M  SG  P ++TYNT+L      G+FK AI
Sbjct: 229 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 288

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG    + TY +LI  +C+   IA+   +L DM      P+ VTYN+L+N  
Sbjct: 289 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 348

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
             +GK   A  ++N +LS G+ PN +T+N L+    S G +    K+  +M     +P+ 
Sbjct: 349 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 408

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            +Y +L++GLCK    D A   + +M         +TY  ++  LCK G L+EA+ LL+ 
Sbjct: 409 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 468

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++     P ++TY+ LI+G  K G  + A  +  ++   G+SP+ I + TLI+  CR   
Sbjct: 469 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 528

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++EA+ + + +   G+   +  + +++  LCK+ KV  A + +  M S    P+   F  
Sbjct: 529 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 588

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++    + G   +A+ ++ ++ +
Sbjct: 589 LINGYGNSGEGLKAFSVFDEMTK 611



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 211/445 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N IL +    G+       +  M +R   PD      LI  L      EK+S ++Q M
Sbjct: 200 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 259

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG  P  +TYN ++   CK+G+ ++AI LLD M   G + DV TYN ++  +  + + 
Sbjct: 260 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 319

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +     +D  ++   P  +TY  LI     +  +  A ++L++M   G SP+ VT+N+L
Sbjct: 320 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 379

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++    +G + +A+ +   + ++G+ P+ ++Y  LL  L     +D        M     
Sbjct: 380 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 439

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TY  +I+GLCK G +D A+   N+M      PDIVTY+ ++   CK G    A +
Sbjct: 440 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 499

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  +     SP  I Y+TLI    + GC+++A+ +Y  M+  G + D  T   L+   C
Sbjct: 500 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 559

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A +V EA + ++ +   G      ++  +I+G   S +   A  V + M    + P   
Sbjct: 560 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 619

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            + +++K +   G   EA K  + L
Sbjct: 620 TYGSLLKGLCKGGHLREAEKFLKSL 644



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 205/435 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L  +C +G+   A +L+D M  +    D      LI  L R +RI K   +L+ M
Sbjct: 270 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 329

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+ +TYN ++ G    G++  A  LL+EM   G  P+ +T+N ++      G F
Sbjct: 330 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 389

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A+  +     KG  P  ++Y +L++ +CK      A      M   G     +TY  +
Sbjct: 390 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 449

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G  D+AV+++N +   G++P+ +TY+ L++     G +    +I+  +     
Sbjct: 450 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 509

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP    Y+ LI   C+ G +  AI  +  M+ +    D  T+N ++ +LCK G + EA +
Sbjct: 510 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 569

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            +  +      P  ++++ LI+G    G   KA  ++ +M + G  P   T+ +L+ G C
Sbjct: 570 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 629

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +   + EA   LK +      +    Y  ++  +CKS  +  A+ +   M+     PD  
Sbjct: 630 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 689

Query: 539 VFSTIVKKVADDGMT 553
            +++++  +   G T
Sbjct: 690 TYTSLISGLCRKGKT 704



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 193/375 (51%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y++++    + G I+ ++ +   M + G  P V T N IL ++  +G+      F K+ L
Sbjct: 166 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 225

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           ++   P + T+ ILI  +C +    ++  ++  M   G +P IVTYN+++++ CK+G++ 
Sbjct: 226 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 285

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A+ +++++ S+G++ +  TYN L+H L           +L  M +    P   TYN LI
Sbjct: 286 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 345

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           NG    G V  A    N+M+S    P+ VT+N ++     EG   EAL++ +++     +
Sbjct: 346 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 405

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  ++Y  L+DGL K    + A   Y +M  NG+    IT+  +I G C+   ++EAV L
Sbjct: 406 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 465

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L E+ K G       Y  +I+G CK  +   A +++  +      P+  ++ST++     
Sbjct: 466 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 525

Query: 550 DGMTEEAYKLWQKLI 564
            G  +EA ++++ +I
Sbjct: 526 MGCLKEAIRIYEAMI 540



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 206/427 (48%), Gaps = 7/427 (1%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S DG  ++ D  T + ++  FC  G+   A +++  + R    P+      LI    R+ 
Sbjct: 470 SKDG--IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 527

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
            +++A ++ + M++ G   D  T+N++V  LCK G++  A   +  M+  G  P+ ++++
Sbjct: 528 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 587

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++    ++G+  +A   + +  + G  P   TY  L++ +CK   +  A + L  +   
Sbjct: 588 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 647

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
             + D V YN+L+   CK G    AV +   ++ R + P+S TY +L+  L  +G    V
Sbjct: 648 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG--KTV 705

Query: 347 DKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             IL      +     P    Y   ++G+ K G     I    QM +    PDIVT N +
Sbjct: 706 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 765

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +    + G + +   LL  +   +  P L TYN L+ G +K+  +  + +LY  ++ NGI
Sbjct: 766 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 825

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD +T  +L+ G C ++ +E  + +LK    RG ++    + ++I   C + +++ A  
Sbjct: 826 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 885

Query: 524 VLELMIS 530
           ++++M S
Sbjct: 886 LVKVMTS 892



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 214/483 (44%), Gaps = 38/483 (7%)

Query: 123  ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMS 181
            ++ N C  G L +A ++ + M       D HF  N L+  L +  ++ +A + ++ M   
Sbjct: 519  LIYNCCRMGCLKEAIRIYEAMILEGHTRD-HFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 577

Query: 182  GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
            G +P+T++++ ++ G    G+   A ++ DEM+  G  P   TY ++L+ +   G  ++A
Sbjct: 578  GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 637

Query: 242  IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              F K           + Y  L+  +CK   +A+A+ +  +M      PD  TY SL++ 
Sbjct: 638  EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 697

Query: 302  SCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C++GK   A+L      +RG + PN + Y   +  +   G W A     + M+   H+P
Sbjct: 698  LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 757

Query: 361  TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG--------------- 405
             + T N +I+G  + G +++  +   +M ++N  P++ TYN +L                
Sbjct: 758  DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 817

Query: 406  --------------------ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                                 +C+  ML   L++L             T+N LI      
Sbjct: 818  RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 877

Query: 446  GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
            G +  A  L   M   GIS D  T   ++    R  + +E+  +L E+ K+G    +  Y
Sbjct: 878  GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 937

Query: 506  RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +I+GLC+   +  A  V E MI+ +  P +   S +V+ +A  G  +EA  L + +++
Sbjct: 938  IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 997

Query: 566  WKV 568
             K+
Sbjct: 998  MKL 1000



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/469 (21%), Positives = 209/469 (44%), Gaps = 13/469 (2%)

Query: 96   ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
            +TK  H P+              T   +L+  C  G L +A K +  +       D    
Sbjct: 609  MTKVGHHPTFF------------TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 656

Query: 156  INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
              L+  + +   + KA  +   MV    +PD+ TY  ++ GLC++G+   AI    E   
Sbjct: 657  NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 716

Query: 216  SG-CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G   P+ + Y   +  MF  G++K  I F +     G  P ++T   +I+   +   I 
Sbjct: 717  RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 776

Query: 275  RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            +  ++L +M  +   P++ TYN L++   K+     + L+  +++  G+ P+ +T ++L+
Sbjct: 777  KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 836

Query: 335  HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
              +      +   KIL            +T+N+LI+  C  G ++ A +    M S    
Sbjct: 837  LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 896

Query: 395  PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
             D  T + ++  L +     E+  +LH ++    SP    Y  LI+GL + G ++ A V+
Sbjct: 897  LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 956

Query: 455  YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              +M+ + I P ++    ++    +  + +EA  LL+ + K       +++  ++H  CK
Sbjct: 957  KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 1016

Query: 515  SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +  V  A+++  +M +   K D   ++ ++  +   G    A++L++++
Sbjct: 1017 NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1065



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 182/433 (42%), Gaps = 36/433 (8%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D    N +L   C  G L  A  L   M +R+ +PD +   +LI GL R  +   A    
Sbjct: 652  DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 711

Query: 176  QIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            +     G V P+ + Y   V G+ K GQ ++ I   ++M   G  PD++T N ++     
Sbjct: 712  KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 771

Query: 235  NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             GK ++      +   +   P L TY IL+    K+  ++ +  +   + + G  PD +T
Sbjct: 772  MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 831

Query: 295  YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH------------------- 335
             +SLV   C+    +  + ++   + RG+E +  T+N L+                    
Sbjct: 832  CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 891

Query: 336  SLGSRGCWDAVDKILDIMNEASH----------------SPTVFTYNILINGLCKYGLVD 379
            SLG     D  D ++ ++N                    SP    Y  LINGLC+ G + 
Sbjct: 892  SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 951

Query: 380  RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
             A     +M++    P  V  + ++ AL K G  +EA  LL  +      P + ++ TL+
Sbjct: 952  TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 1011

Query: 440  DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
                K G + +A+ L   M   G+  D +++  LI G C    +  A +L +E+   G  
Sbjct: 1012 HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL 1071

Query: 500  MRNSAYRLVIHGL 512
               + Y+ +I GL
Sbjct: 1072 ANATTYKALIRGL 1084



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 117/236 (49%), Gaps = 2/236 (0%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N   Y+ L+      G      +I  +M     +P+V+T N ++  + K G  D ++ SF
Sbjct: 162 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG-EDVSVWSF 220

Query: 386 -NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M+ +   PD+ T+N ++  LC EG   ++  L+  +  S  +P ++TYNT++    K
Sbjct: 221 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 280

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           KG  + A+ L   M   G+  D  T+  LI   CR++++ +   LL+++ KR        
Sbjct: 281 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 340

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           Y  +I+G     KV +A Q+L  M+S    P+   F+ ++     +G  +EA K++
Sbjct: 341 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 396



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 1/239 (0%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            VE D  T N ++   C+ G++  A  L+ +M       D   C  ++  L R  R +++ 
Sbjct: 860  VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 919

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             VL  M   G  P++  Y  ++ GLC+ G I++A  + +EM      P  +  + ++R +
Sbjct: 920  MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 979

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               GK  +A    +  L+    P + ++T L+   CK   +  A+E+   M+  G   D+
Sbjct: 980  AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 1039

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR-GCWDAVDKIL 350
            V+YN L+   C +G    A  +   +   G   N+ TY  L+  L +R   +   D IL
Sbjct: 1040 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1098



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 104/208 (50%), Gaps = 2/208 (0%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P+V  Y+ILI    + G++  ++  F  M      P + T N +LG++ K G       
Sbjct: 162 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 219

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            L  +      P + T+N LI+ L  +G  EK+  L  +M ++G +P  +T+ T++  +C
Sbjct: 220 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 279

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  + + A++LL  +  +G       Y ++IH LC+S ++     +L  M      P++ 
Sbjct: 280 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 339

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            ++T++   +++G    A +L  +++ +
Sbjct: 340 TYNTLINGFSNEGKVLIASQLLNEMLSF 367


>gi|8843735|dbj|BAA97283.1| unnamed protein product [Arabidopsis thaliana]
          Length = 1274

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 226/487 (46%), Gaps = 36/487 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N ++ + C   ++     L+  M +R   P+      LI G     ++  AS
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 318

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+  G  P+ +T+N ++ G    G  + A+ +   M   G  P  ++Y  +L  +
Sbjct: 319 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N +F  A GF+    R G     ITYT +I+ +CK   +  A+ +L++M+ +G  PDI
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY++L+N  CK G++  A  ++  +   G+ PN I Y+TL+++    GC     +I + 
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVD--------------------------------- 379
           M    H+   FT+N+L+  LCK G V                                  
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558

Query: 380 --RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
             +A + F++M      P   TY ++L  LCK G L EA + L  L+    +   + YNT
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           L+  + K G + KA+ L+G+M++  I PD  T+ +LI G CR  +   A+   KE   RG
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 498 NKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           N + N   Y   + G+ K+ +    I   E M +  + PD    + ++   +  G  E+ 
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738

Query: 557 YKLWQKL 563
             L  ++
Sbjct: 739 NDLLPEM 745



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 118/441 (26%), Positives = 219/441 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +   G + D+ ++  +M      P  + C  ++  +++          L+ M+   
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  T+N+++  LC  G    +  L+ +M  SG  P ++TYNT+L      G+FK AI
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG    + TY +LI  +C+   IA+   +L DM      P+ VTYN+L+N  
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
             +GK   A  ++N +LS G+ PN +T+N L+    S G +    K+  +M     +P+ 
Sbjct: 309 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            +Y +L++GLCK    D A   + +M         +TY  ++  LCK G L+EA+ LL+ 
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++     P ++TY+ LI+G  K G  + A  +  ++   G+SP+ I + TLI+  CR   
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++EA+ + + +   G+   +  + +++  LCK+ KV  A + +  M S    P+   F  
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++    + G   +A+ ++ ++
Sbjct: 549 LINGYGNSGEGLKAFSVFDEM 569



 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 211/445 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N IL +    G+       +  M +R   PD      LI  L      EK+S ++Q M
Sbjct: 160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 219

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG  P  +TYN ++   CK+G+ ++AI LLD M   G + DV TYN ++  +  + + 
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +     +D  ++   P  +TY  LI     +  +  A ++L++M   G SP+ VT+N+L
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++    +G + +A+ +   + ++G+ P+ ++Y  LL  L     +D        M     
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TY  +I+GLCK G +D A+   N+M      PDIVTY+ ++   CK G    A +
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 459

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  +     SP  I Y+TLI    + GC+++A+ +Y  M+  G + D  T   L+   C
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 519

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A +V EA + ++ +   G      ++  +I+G   S +   A  V + M    + P   
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            + +++K +   G   EA K  + L
Sbjct: 580 TYGSLLKGLCKGGHLREAEKFLKSL 604



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 205/435 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L  +C +G+   A +L+D M  +    D      LI  L R +RI K   +L+ M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+ +TYN ++ G    G++  A  LL+EM   G  P+ +T+N ++      G F
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A+  +     KG  P  ++Y +L++ +CK      A      M   G     +TY  +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G  D+AV+++N +   G++P+ +TY+ L++     G +    +I+  +     
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP    Y+ LI   C+ G +  AI  +  M+ +    D  T+N ++ +LCK G + EA +
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            +  +      P  ++++ LI+G    G   KA  ++ +M + G  P   T+ +L+ G C
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +   + EA   LK +      +    Y  ++  +CKS  +  A+ +   M+     PD  
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649

Query: 539 VFSTIVKKVADDGMT 553
            +++++  +   G T
Sbjct: 650 TYTSLISGLCRKGKT 664



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 193/375 (51%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y++++    + G I+ ++ +   M + G  P V T N IL ++  +G+      F K+ L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           ++   P + T+ ILI  +C +    ++  ++  M   G +P IVTYN+++++ CK+G++ 
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A+ +++++ S+G++ +  TYN L+H L           +L  M +    P   TYN LI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           NG    G V  A    N+M+S    P+ VT+N ++     EG   EAL++ +++     +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  ++Y  L+DGL K    + A   Y +M  NG+    IT+  +I G C+   ++EAV L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L E+ K G       Y  +I+G CK  +   A +++  +      P+  ++ST++     
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 550 DGMTEEAYKLWQKLI 564
            G  +EA ++++ +I
Sbjct: 486 MGCLKEAIRIYEAMI 500



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 206/427 (48%), Gaps = 7/427 (1%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S DG  ++ D  T + ++  FC  G+   A +++  + R    P+      LI    R+ 
Sbjct: 430 SKDG--IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
            +++A ++ + M++ G   D  T+N++V  LCK G++  A   +  M+  G  P+ ++++
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++    ++G+  +A   + +  + G  P   TY  L++ +CK   +  A + L  +   
Sbjct: 548 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 607

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
             + D V YN+L+   CK G    AV +   ++ R + P+S TY +L+  L  +G    V
Sbjct: 608 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG--KTV 665

Query: 347 DKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             IL      +     P    Y   ++G+ K G     I    QM +    PDIVT N +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +    + G + +   LL  +   +  P L TYN L+ G +K+  +  + +LY  ++ NGI
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD +T  +L+ G C ++ +E  + +LK    RG ++    + ++I   C + +++ A  
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845

Query: 524 VLELMIS 530
           ++++M S
Sbjct: 846 LVKVMTS 852



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 214/483 (44%), Gaps = 38/483 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMS 181
           ++ N C  G L +A ++ + M       D HF  N L+  L +  ++ +A + ++ M   
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRD-HFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G +P+T++++ ++ G    G+   A ++ DEM+  G  P   TY ++L+ +   G  ++A
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
             F K           + Y  L+  +CK   +A+A+ +  +M      PD  TY SL++ 
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657

Query: 302 SCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
            C++GK   A+L      +RG + PN + Y   +  +   G W A     + M+   H+P
Sbjct: 658 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 717

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG--------------- 405
            + T N +I+G  + G +++  +   +M ++N  P++ TYN +L                
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777

Query: 406 --------------------ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                                +C+  ML   L++L             T+N LI      
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G +  A  L   M   GIS D  T   ++    R  + +E+  +L E+ K+G    +  Y
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I+GLC+   +  A  V E MI+ +  P +   S +V+ +A  G  +EA  L + +++
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957

Query: 566 WKV 568
            K+
Sbjct: 958 MKL 960



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/469 (21%), Positives = 209/469 (44%), Gaps = 13/469 (2%)

Query: 96   ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
            +TK  H P+              T   +L+  C  G L +A K +  +       D    
Sbjct: 569  MTKVGHHPTFF------------TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 616

Query: 156  INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
              L+  + +   + KA  +   MV    +PD+ TY  ++ GLC++G+   AI    E   
Sbjct: 617  NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 216  SG-CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G   P+ + Y   +  MF  G++K  I F +     G  P ++T   +I+   +   I 
Sbjct: 677  RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736

Query: 275  RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            +  ++L +M  +   P++ TYN L++   K+     + L+  +++  G+ P+ +T ++L+
Sbjct: 737  KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796

Query: 335  HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
              +      +   KIL            +T+N+LI+  C  G ++ A +    M S    
Sbjct: 797  LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 856

Query: 395  PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
             D  T + ++  L +     E+  +LH ++    SP    Y  LI+GL + G ++ A V+
Sbjct: 857  LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 916

Query: 455  YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              +M+ + I P ++    ++    +  + +EA  LL+ + K       +++  ++H  CK
Sbjct: 917  KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 976

Query: 515  SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +  V  A+++  +M +   K D   ++ ++  +   G    A++L++++
Sbjct: 977  NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 182/433 (42%), Gaps = 36/433 (8%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D    N +L   C  G L  A  L   M +R+ +PD +   +LI GL R  +   A    
Sbjct: 612  DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 671

Query: 176  QIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            +     G V P+ + Y   V G+ K GQ ++ I   ++M   G  PD++T N ++     
Sbjct: 672  KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 731

Query: 235  NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             GK ++      +   +   P L TY IL+    K+  ++ +  +   + + G  PD +T
Sbjct: 732  MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 791

Query: 295  YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH------------------- 335
             +SLV   C+    +  + ++   + RG+E +  T+N L+                    
Sbjct: 792  CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 851

Query: 336  SLGSRGCWDAVDKILDIMNEASH----------------SPTVFTYNILINGLCKYGLVD 379
            SLG     D  D ++ ++N                    SP    Y  LINGLC+ G + 
Sbjct: 852  SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 911

Query: 380  RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
             A     +M++    P  V  + ++ AL K G  +EA  LL  +      P + ++ TL+
Sbjct: 912  TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971

Query: 440  DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
                K G + +A+ L   M   G+  D +++  LI G C    +  A +L +E+   G  
Sbjct: 972  HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL 1031

Query: 500  MRNSAYRLVIHGL 512
               + Y+ +I GL
Sbjct: 1032 ANATTYKALIRGL 1044



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 117/236 (49%), Gaps = 2/236 (0%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N   Y+ L+      G      +I  +M     +P+V+T N ++  + K G  D ++ SF
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG-EDVSVWSF 180

Query: 386 -NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M+ +   PD+ T+N ++  LC EG   ++  L+  +  S  +P ++TYNT++    K
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           KG  + A+ L   M   G+  D  T+  LI   CR++++ +   LL+++ KR        
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           Y  +I+G     KV +A Q+L  M+S    P+   F+ ++     +G  +EA K++
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 1/239 (0%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            VE D  T N ++   C+ G++  A  L+ +M       D   C  ++  L R  R +++ 
Sbjct: 820  VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             VL  M   G  P++  Y  ++ GLC+ G I++A  + +EM      P  +  + ++R +
Sbjct: 880  MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               GK  +A    +  L+    P + ++T L+   CK   +  A+E+   M+  G   D+
Sbjct: 940  AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR-GCWDAVDKIL 350
            V+YN L+   C +G    A  +   +   G   N+ TY  L+  L +R   +   D IL
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 104/208 (50%), Gaps = 2/208 (0%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P+V  Y+ILI    + G++  ++  F  M      P + T N +LG++ K G       
Sbjct: 122 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            L  +      P + T+N LI+ L  +G  EK+  L  +M ++G +P  +T+ T++  +C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  + + A++LL  +  +G       Y ++IH LC+S ++     +L  M      P++ 
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            ++T++   +++G    A +L  +++ +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSF 327


>gi|223635748|sp|Q9LVQ5.2|PP432_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At5g55840
          Length = 1096

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/487 (27%), Positives = 226/487 (46%), Gaps = 36/487 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N ++ + C   ++     L+  M +R   P+      LI G     ++  AS
Sbjct: 259 VDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIAS 318

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+  G  P+ +T+N ++ G    G  + A+ +   M   G  P  ++Y  +L  +
Sbjct: 319 QLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGL 378

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N +F  A GF+    R G     ITYT +I+ +CK   +  A+ +L++M+ +G  PDI
Sbjct: 379 CKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDI 438

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY++L+N  CK G++  A  ++  +   G+ PN I Y+TL+++    GC     +I + 
Sbjct: 439 VTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEA 498

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVD--------------------------------- 379
           M    H+   FT+N+L+  LCK G V                                  
Sbjct: 499 MILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGE 558

Query: 380 --RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
             +A + F++M      P   TY ++L  LCK G L EA + L  L+    +   + YNT
Sbjct: 559 GLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMYNT 618

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           L+  + K G + KA+ L+G+M++  I PD  T+ +LI G CR  +   A+   KE   RG
Sbjct: 619 LLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEARG 678

Query: 498 NKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           N + N   Y   + G+ K+ +    I   E M +  + PD    + ++   +  G  E+ 
Sbjct: 679 NVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIEKT 738

Query: 557 YKLWQKL 563
             L  ++
Sbjct: 739 NDLLPEM 745



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 220/443 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +   G + D+ ++  +M      P  + C  ++  +++          L+ M+   
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEMLKRK 188

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  T+N+++  LC  G    +  L+ +M  SG  P ++TYNT+L      G+FK AI
Sbjct: 189 ICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG    + TY +LI  +C+   IA+   +L DM      P+ VTYN+L+N  
Sbjct: 249 ELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLINGF 308

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
             +GK   A  ++N +LS G+ PN +T+N L+    S G +    K+  +M     +P+ 
Sbjct: 309 SNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLTPSE 368

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            +Y +L++GLCK    D A   + +M         +TY  ++  LCK G L+EA+ LL+ 
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVLLNE 428

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++     P ++TY+ LI+G  K G  + A  +  ++   G+SP+ I + TLI+  CR   
Sbjct: 429 MSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++EA+ + + +   G+   +  + +++  LCK+ KV  A + +  M S    P+   F  
Sbjct: 489 LKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFDC 548

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++    + G   +A+ ++ ++ +
Sbjct: 549 LINGYGNSGEGLKAFSVFDEMTK 571



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 211/445 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N IL +    G+       +  M +R   PD      LI  L      EK+S ++Q M
Sbjct: 160 TCNAILGSVVKSGEDVSVWSFLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKM 219

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG  P  +TYN ++   CK+G+ ++AI LLD M   G + DV TYN ++  +  + + 
Sbjct: 220 EKSGYAPTIVTYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRI 279

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +     +D  ++   P  +TY  LI     +  +  A ++L++M   G SP+ VT+N+L
Sbjct: 280 AKGYLLLRDMRKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNAL 339

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++    +G + +A+ +   + ++G+ P+ ++Y  LL  L     +D        M     
Sbjct: 340 IDGHISEGNFKEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGV 399

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TY  +I+GLCK G +D A+   N+M      PDIVTY+ ++   CK G    A +
Sbjct: 400 CVGRITYTGMIDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKE 459

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  +     SP  I Y+TLI    + GC+++A+ +Y  M+  G + D  T   L+   C
Sbjct: 460 IVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLC 519

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A +V EA + ++ +   G      ++  +I+G   S +   A  V + M    + P   
Sbjct: 520 KAGKVAEAEEFMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFF 579

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            + +++K +   G   EA K  + L
Sbjct: 580 TYGSLLKGLCKGGHLREAEKFLKSL 604



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/435 (25%), Positives = 205/435 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L  +C +G+   A +L+D M  +    D      LI  L R +RI K   +L+ M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDM 289

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+ +TYN ++ G    G++  A  LL+EM   G  P+ +T+N ++      G F
Sbjct: 290 RKRMIHPNEVTYNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNF 349

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A+  +     KG  P  ++Y +L++ +CK      A      M   G     +TY  +
Sbjct: 350 KEALKMFYMMEAKGLTPSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G  D+AV+++N +   G++P+ +TY+ L++     G +    +I+  +     
Sbjct: 410 IDGLCKNGFLDEAVVLLNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGL 469

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP    Y+ LI   C+ G +  AI  +  M+ +    D  T+N ++ +LCK G + EA +
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            +  +      P  ++++ LI+G    G   KA  ++ +M + G  P   T+ +L+ G C
Sbjct: 530 FMRCMTSDGILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +   + EA   LK +      +    Y  ++  +CKS  +  A+ +   M+     PD  
Sbjct: 590 KGGHLREAEKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSY 649

Query: 539 VFSTIVKKVADDGMT 553
            +++++  +   G T
Sbjct: 650 TYTSLISGLCRKGKT 664



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 104/375 (27%), Positives = 193/375 (51%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y++++    + G I+ ++ +   M + G  P V T N IL ++  +G+      F K+ L
Sbjct: 126 YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWSFLKEML 185

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           ++   P + T+ ILI  +C +    ++  ++  M   G +P IVTYN+++++ CK+G++ 
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A+ +++++ S+G++ +  TYN L+H L           +L  M +    P   TYN LI
Sbjct: 246 AAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVTYNTLI 305

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           NG    G V  A    N+M+S    P+ VT+N ++     EG   EAL++ +++     +
Sbjct: 306 NGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMFYMMEAKGLT 365

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  ++Y  L+DGL K    + A   Y +M  NG+    IT+  +I G C+   ++EAV L
Sbjct: 366 PSEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVL 425

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L E+ K G       Y  +I+G CK  +   A +++  +      P+  ++ST++     
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 550 DGMTEEAYKLWQKLI 564
            G  +EA ++++ +I
Sbjct: 486 MGCLKEAIRIYEAMI 500



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 107/427 (25%), Positives = 206/427 (48%), Gaps = 7/427 (1%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S DG  ++ D  T + ++  FC  G+   A +++  + R    P+      LI    R+ 
Sbjct: 430 SKDG--IDPDIVTYSALINGFCKVGRFKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMG 487

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
            +++A ++ + M++ G   D  T+N++V  LCK G++  A   +  M+  G  P+ ++++
Sbjct: 488 CLKEAIRIYEAMILEGHTRDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNTVSFD 547

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++    ++G+  +A   + +  + G  P   TY  L++ +CK   +  A + L  +   
Sbjct: 548 CLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREAEKFLKSLHAV 607

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
             + D V YN+L+   CK G    AV +   ++ R + P+S TY +L+  L  +G    V
Sbjct: 608 PAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKG--KTV 665

Query: 347 DKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             IL      +     P    Y   ++G+ K G     I    QM +    PDIVT N +
Sbjct: 666 IAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAM 725

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +    + G + +   LL  +   +  P L TYN L+ G +K+  +  + +LY  ++ NGI
Sbjct: 726 IDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGI 785

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD +T  +L+ G C ++ +E  + +LK    RG ++    + ++I   C + +++ A  
Sbjct: 786 LPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFD 845

Query: 524 VLELMIS 530
           ++++M S
Sbjct: 846 LVKVMTS 852



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 116/483 (24%), Positives = 214/483 (44%), Gaps = 38/483 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMS 181
           ++ N C  G L +A ++ + M       D HF  N L+  L +  ++ +A + ++ M   
Sbjct: 479 LIYNCCRMGCLKEAIRIYEAMILEGHTRD-HFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G +P+T++++ ++ G    G+   A ++ DEM+  G  P   TY ++L+ +   G  ++A
Sbjct: 538 GILPNTVSFDCLINGYGNSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLREA 597

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
             F K           + Y  L+  +CK   +A+A+ +  +M      PD  TY SL++ 
Sbjct: 598 EKFLKSLHAVPAAVDTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISG 657

Query: 302 SCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
            C++GK   A+L      +RG + PN + Y   +  +   G W A     + M+   H+P
Sbjct: 658 LCRKGKTVIAILFAKEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTP 717

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG--------------- 405
            + T N +I+G  + G +++  +   +M ++N  P++ TYN +L                
Sbjct: 718 DIVTTNAMIDGYSRMGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLY 777

Query: 406 --------------------ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                                +C+  ML   L++L             T+N LI      
Sbjct: 778 RSIILNGILPDKLTCHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCAN 837

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G +  A  L   M   GIS D  T   ++    R  + +E+  +L E+ K+G    +  Y
Sbjct: 838 GEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I+GLC+   +  A  V E MI+ +  P +   S +V+ +A  G  +EA  L + +++
Sbjct: 898 IGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLK 957

Query: 566 WKV 568
            K+
Sbjct: 958 MKL 960



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 102/469 (21%), Positives = 209/469 (44%), Gaps = 13/469 (2%)

Query: 96   ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
            +TK  H P+              T   +L+  C  G L +A K +  +       D    
Sbjct: 569  MTKVGHHPTFF------------TYGSLLKGLCKGGHLREAEKFLKSLHAVPAAVDTVMY 616

Query: 156  INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
              L+  + +   + KA  +   MV    +PD+ TY  ++ GLC++G+   AI    E   
Sbjct: 617  NTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 216  SG-CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G   P+ + Y   +  MF  G++K  I F +     G  P ++T   +I+   +   I 
Sbjct: 677  RGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSRMGKIE 736

Query: 275  RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            +  ++L +M  +   P++ TYN L++   K+     + L+  +++  G+ P+ +T ++L+
Sbjct: 737  KTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLTCHSLV 796

Query: 335  HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
              +      +   KIL            +T+N+LI+  C  G ++ A +    M S    
Sbjct: 797  LGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGIS 856

Query: 395  PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
             D  T + ++  L +     E+  +LH ++    SP    Y  LI+GL + G ++ A V+
Sbjct: 857  LDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVV 916

Query: 455  YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              +M+ + I P ++    ++    +  + +EA  LL+ + K       +++  ++H  CK
Sbjct: 917  KEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCK 976

Query: 515  SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +  V  A+++  +M +   K D   ++ ++  +   G    A++L++++
Sbjct: 977  NGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEM 1025



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 107/433 (24%), Positives = 182/433 (42%), Gaps = 36/433 (8%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D    N +L   C  G L  A  L   M +R+ +PD +   +LI GL R  +   A    
Sbjct: 612  DTVMYNTLLTAMCKSGNLAKAVSLFGEMVQRSILPDSYTYTSLISGLCRKGKTVIAILFA 671

Query: 176  QIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            +     G V P+ + Y   V G+ K GQ ++ I   ++M   G  PD++T N ++     
Sbjct: 672  KEAEARGNVLPNKVMYTCFVDGMFKAGQWKAGIYFREQMDNLGHTPDIVTTNAMIDGYSR 731

Query: 235  NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             GK ++      +   +   P L TY IL+    K+  ++ +  +   + + G  PD +T
Sbjct: 732  MGKIEKTNDLLPEMGNQNGGPNLTTYNILLHGYSKRKDVSTSFLLYRSIILNGILPDKLT 791

Query: 295  YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH------------------- 335
             +SLV   C+    +  + ++   + RG+E +  T+N L+                    
Sbjct: 792  CHSLVLGICESNMLEIGLKILKAFICRGVEVDRYTFNMLISKCCANGEINWAFDLVKVMT 851

Query: 336  SLGSRGCWDAVDKILDIMNEASH----------------SPTVFTYNILINGLCKYGLVD 379
            SLG     D  D ++ ++N                    SP    Y  LINGLC+ G + 
Sbjct: 852  SLGISLDKDTCDAMVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLINGLCRVGDIK 911

Query: 380  RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
             A     +M++    P  V  + ++ AL K G  +EA  LL  +      P + ++ TL+
Sbjct: 912  TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEATLLLRFMLKMKLVPTIASFTTLM 971

Query: 440  DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
                K G + +A+ L   M   G+  D +++  LI G C    +  A +L +E+   G  
Sbjct: 972  HLCCKNGNVIEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMALAFELYEEMKGDGFL 1031

Query: 500  MRNSAYRLVIHGL 512
               + Y+ +I GL
Sbjct: 1032 ANATTYKALIRGL 1044



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 64/236 (27%), Positives = 117/236 (49%), Gaps = 2/236 (0%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N   Y+ L+      G      +I  +M     +P+V+T N ++  + K G  D ++ SF
Sbjct: 122 NPSVYDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSG-EDVSVWSF 180

Query: 386 -NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M+ +   PD+ T+N ++  LC EG   ++  L+  +  S  +P ++TYNT++    K
Sbjct: 181 LKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYCK 240

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           KG  + A+ L   M   G+  D  T+  LI   CR++++ +   LL+++ KR        
Sbjct: 241 KGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEVT 300

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           Y  +I+G     KV +A Q+L  M+S    P+   F+ ++     +G  +EA K++
Sbjct: 301 YNTLINGFSNEGKVLIASQLLNEMLSFGLSPNHVTFNALIDGHISEGNFKEALKMF 356



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 62/239 (25%), Positives = 109/239 (45%), Gaps = 1/239 (0%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            VE D  T N ++   C+ G++  A  L+ +M       D   C  ++  L R  R +++ 
Sbjct: 820  VEVDRYTFNMLISKCCANGEINWAFDLVKVMTSLGISLDKDTCDAMVSVLNRNHRFQESR 879

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             VL  M   G  P++  Y  ++ GLC+ G I++A  + +EM      P  +  + ++R +
Sbjct: 880  MVLHEMSKQGISPESRKYIGLINGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               GK  +A    +  L+    P + ++T L+   CK   +  A+E+   M+  G   D+
Sbjct: 940  AKCGKADEATLLLRFMLKMKLVPTIASFTTLMHLCCKNGNVIEALELRVVMSNCGLKLDL 999

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR-GCWDAVDKIL 350
            V+YN L+   C +G    A  +   +   G   N+ TY  L+  L +R   +   D IL
Sbjct: 1000 VSYNVLITGLCAKGDMALAFELYEEMKGDGFLANATTYKALIRGLLARETAFSGADIIL 1058



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/208 (24%), Positives = 104/208 (50%), Gaps = 2/208 (0%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P+V  Y+ILI    + G++  ++  F  M      P + T N +LG++ K G       
Sbjct: 122 NPSV--YDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSVVKSGEDVSVWS 179

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            L  +      P + T+N LI+ L  +G  EK+  L  +M ++G +P  +T+ T++  +C
Sbjct: 180 FLKEMLKRKICPDVATFNILINVLCAEGSFEKSSYLMQKMEKSGYAPTIVTYNTVLHWYC 239

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  + + A++LL  +  +G       Y ++IH LC+S ++     +L  M      P++ 
Sbjct: 240 KKGRFKAAIELLDHMKSKGVDADVCTYNMLIHDLCRSNRIAKGYLLLRDMRKRMIHPNEV 299

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            ++T++   +++G    A +L  +++ +
Sbjct: 300 TYNTLINGFSNEGKVLIASQLLNEMLSF 327


>gi|225424122|ref|XP_002280156.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Vitis vinifera]
          Length = 718

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/374 (30%), Positives = 200/374 (53%)

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           ++++    K+  +   +++ D+M  S   PDV   N ILR + D     +A+  ++    
Sbjct: 168 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 227

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P ++TY  L++  CK   + + +++L +M   GC+P+ VTYN L+N   K+G+++ 
Sbjct: 228 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 287

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  +I  +L  G++ ++ TYN L++   ++G       + + M     SPTV TYN  I 
Sbjct: 288 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIY 347

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GLCK G +  A+   + M++ N  PD+V+YNT++   C+ G L +A  L   L      P
Sbjct: 348 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 407

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            ++TYNTL+DGL ++G +E A  L  +M+  GI+PD +T+  L+ G C+   +  A +  
Sbjct: 408 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 467

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+   G ++ + AY   I G  K      A  + E M++  + PD  +++ +V  +   
Sbjct: 468 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 527

Query: 551 GMTEEAYKLWQKLI 564
           G  EEA +L QK++
Sbjct: 528 GNLEEASELLQKMV 541



 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/436 (28%), Positives = 218/436 (50%), Gaps = 2/436 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T N ++     +G+   A  LI  M +       +    LI G      + +A  + 
Sbjct: 268 NDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQ 327

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV+ G  P   TYN  + GLCK G++  A+  L +M  +   PDV++YNT++      
Sbjct: 328 EEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRL 387

Query: 236 GKFKQAIGFWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           G   +A   + D+LR     P ++TY  L++ +C+Q  +  A ++  +M  EG +PDIVT
Sbjct: 388 GNLMKAFLLF-DELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVT 446

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y  LVN SCK G    A    + +L  G+E +S  Y T +      G       + + M 
Sbjct: 447 YTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEML 506

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P +  YN++++GLCK G ++ A     +MVS    PD VTY +++ A  + G L 
Sbjct: 507 AKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSIIHAHLENGRLR 566

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +  ++ + +     +P ++TY  LI G A KG +E+A + + +M E GI P+ IT+ +LI
Sbjct: 567 KGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGILPNVITYNSLI 626

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+  ++++A +   E+ ++G      +Y ++I+  C       A+ + + M+    +
Sbjct: 627 NGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSLYKQMLDRGVQ 686

Query: 535 PDDTVFSTIVKKVADD 550
           PD    S ++K++  D
Sbjct: 687 PDSCTHSALLKQLGKD 702



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/427 (27%), Positives = 210/427 (49%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           + D M +    PD   C  ++R L   D + KA +V + M   G  P  +TYN ++   C
Sbjct: 186 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 245

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K G+++  + LL EM   GC P+ +TYN ++  +   G+F+QA G   + L+ G      
Sbjct: 246 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 305

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY  LI     +  +A A+ + ++M ++G SP + TYNS +   CK G+  DA+  ++++
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L+  + P+ ++YNTL++     G       + D +      PT+ TYN L++GLC+ G +
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 425

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + A     +M+++   PDIVTY  ++   CK G L+ A +    +           Y T 
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I G  K G   +A  L  +M+  G  PD I +  ++ G C+   +EEA +LL+++   G 
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 Y  +IH   ++ ++    ++   M+S    P    ++ ++   A  G  E A+ 
Sbjct: 546 IPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFI 605

Query: 559 LWQKLIE 565
            + ++ E
Sbjct: 606 YFSEMQE 612



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 126/489 (25%), Positives = 232/489 (47%), Gaps = 37/489 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D K  N+IL+    +  ++ A ++   M      P       L+    +  ++++   +L
Sbjct: 198 DVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLL 257

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ +TYN+++ GL K+G+   A  L+ EM  +G +    TYN ++   F+ 
Sbjct: 258 SEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNK 317

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+   ++ + KG  P + TY   I  +CK   ++ A++ L DM      PD+V+Y
Sbjct: 318 GMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSY 377

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI-LDIMN 354
           N+L+   C+ G    A L+ + L S  + P  +TYNTLL  L  +G  +   ++ ++++N
Sbjct: 378 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 437

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFN---------------------------- 386
           E   +P + TY IL+NG CK G +  A   F+                            
Sbjct: 438 EGI-APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 496

Query: 387 -------QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
                  +M++K   PD++ YN V+  LCK G L EA +LL  +      P  +TY ++I
Sbjct: 497 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGVIPDYVTYTSII 556

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
               + G + K   ++ +M+  G++P  +T+  LI G     ++E A     E+ ++G  
Sbjct: 557 HAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFIYFSEMQEKGIL 616

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +I+GLCK +++D A      M+     P+   ++ ++ +  + G  +EA  L
Sbjct: 617 PNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENCNMGNWQEALSL 676

Query: 560 WQKLIEWKV 568
           ++++++  V
Sbjct: 677 YKQMLDRGV 685



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 200/413 (48%), Gaps = 1/413 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  + ++G L +A  L + M  +   P      + I GL ++ R+  A + L  M
Sbjct: 306 TYNPLIYGYFNKGMLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 365

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +  +PD ++YN ++ G C+ G +  A  L DE+      P ++TYNT+L  +   G+ 
Sbjct: 366 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 425

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A     + + +G  P ++TYTIL+   CK   ++ A E  D+M  EG   D   Y + 
Sbjct: 426 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 485

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K G    A  +   +L++G  P+ I YN ++  L   G  +   ++L  M     
Sbjct: 486 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKMVSDGV 545

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  +I+   + G + +    F +M+SK   P +VTY  ++     +G L  A  
Sbjct: 546 IPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGRLERAFI 605

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               +      P +ITYN+LI+GL K   M++A   + +M+E GI P+  ++  LI   C
Sbjct: 606 YFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTILINENC 665

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
                +EA+ L K++  RG +  +  +  ++  L K  K+  A++ LE ++ S
Sbjct: 666 NMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQ-AVRQLESLLDS 717



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/248 (23%), Positives = 115/248 (46%), Gaps = 35/248 (14%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           S   +V   ++LI    K  +V++ ++ F++M+     PD+   N +L  L  + ++++A
Sbjct: 159 SSEVSVKILDLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKA 218

Query: 417 LQLLHLLNGSSCSPCLITYNTLID-----------------------------------G 441
           +++   +      P ++TYNTL+D                                   G
Sbjct: 219 VEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLING 278

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L+KKG  E+A  L G+M++ G+     T+  LI+G+     + EA+ L +E+  +G    
Sbjct: 279 LSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGMLAEALSLQEEMVLKGASPT 338

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            + Y   I+GLCK  ++  A+Q L  M+++   PD   ++T++      G   +A+ L+ 
Sbjct: 339 VATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFD 398

Query: 562 KLIEWKVF 569
           +L    +F
Sbjct: 399 ELRSIYLF 406



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 49/177 (27%), Positives = 80/177 (45%), Gaps = 4/177 (2%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  V  D  T   I+      G+L    ++   M  +   P       LI G     R
Sbjct: 542 SDG--VIPDYVTYTSIIHAHLENGRLRKGREIFYEMLSKGLTPSVVTYTVLIHGHAGKGR 599

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +E+A      M   G +P+ ITYN ++ GLCK  ++  A     EM   G  P+  +Y  
Sbjct: 600 LERAFIYFSEMQEKGILPNVITYNSLINGLCKVRRMDQAYNFFAEMVEKGIFPNKYSYTI 659

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI--ARAIEVLDD 282
           ++    + G +++A+  +K  L +G  P   T++ L++Q+ K C +   R +E L D
Sbjct: 660 LINENCNMGNWQEALSLYKQMLDRGVQPDSCTHSALLKQLGKDCKLQAVRQLESLLD 716


>gi|224089372|ref|XP_002308709.1| predicted protein [Populus trichocarpa]
 gi|222854685|gb|EEE92232.1| predicted protein [Populus trichocarpa]
          Length = 1115

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 132/452 (29%), Positives = 221/452 (48%), Gaps = 6/452 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C+  KL DA  L   M   +  PD    + L+        ++K  K+ 
Sbjct: 298 DVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDKVEKIW 357

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD +T+ ++V  LCK G+I  A  LLD M   G  P++ TYNT++  +   
Sbjct: 358 TEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLISGLLRA 417

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +   A+  + +    G  P   TY +LI+   K     +A+E  + M   G +P+IV  
Sbjct: 418 NRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAPNIVAC 477

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+ +    + G+  +A  + N L S G+ P+S+TYN ++      G  D   K+L  M++
Sbjct: 478 NASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLLSEMSK 537

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V   N LI+ L K G V+ A   F +M   N  P +VTYN +L  L KEG + +
Sbjct: 538 VQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQK 597

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+QL   +NG  CSP  IT+NTL+D L K   ++ A+ ++ +M      PD +T  T+I 
Sbjct: 598 AVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIH 657

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL--VIHGLCKSKKVDMAIQVLE-LMISSR 532
           GF + +Q++ A+ L  ++ K    +R     L  ++ G+ KS +++ A ++ E       
Sbjct: 658 GFIKQNQIKNAIWLFHQMKKL---LRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVG 714

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              D + +  ++  +  +  TE+A    ++L+
Sbjct: 715 SNIDRSFWEDVMGGILTEAGTEKAILFGERLV 746



 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 229/461 (49%), Gaps = 12/461 (2%)

Query: 103 PSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGL 162
           PSL +     V + ++ N K +               ++ M  R  I  +  CI   R L
Sbjct: 227 PSLKTFSALMVASGKRRNIKTVMGLLEE---------MESMGLRPNIYTYTICI---RVL 274

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
            R  +I++A ++++ M   G  PD +TY +++  LC   ++  A+ L  +M  S  +PD 
Sbjct: 275 GRDGKIDEAYRIMKRMDDDGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDK 334

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           +TY T+L    D G   +    W +    G  P ++T+TIL+  +CK   I  A ++LD 
Sbjct: 335 VTYVTLLDKFSDCGHLDKVEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDT 394

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  +G  P++ TYN+L++   +  + DDA+ + +N+ S G+EP + TY  L+   G  G 
Sbjct: 395 MRKQGVLPNLHTYNTLISGLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGH 454

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                +  + M     +P +   N  +  L + G +  A   FN++ S    PD VTYN 
Sbjct: 455 PGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNM 514

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++    K G ++EA++LL  ++   C P +I  N+LID L K G +E+A  ++ +M E  
Sbjct: 515 MMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMN 574

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           ++P  +T+  L+ G  +  Q+++AV L + +   G       +  ++  LCK+ +VD+A+
Sbjct: 575 LAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDLAL 634

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++   M +   +PD   F+TI+         + A  L+ ++
Sbjct: 635 KMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQM 675



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 219/460 (47%), Gaps = 10/460 (2%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMAR---RNQIPDFHFCIN--LIRGLIRI 165
           P V +  +T N +L+      ++ D + + D+M R   R  +  +        IRG +R 
Sbjct: 118 PNVVHTTETCNHMLEILRVHRRVEDMAFVFDLMQRQIIRRNVDTYLIIFKSLFIRGGLR- 176

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
               +A   L+ M  +G V +  +YN ++  L + G  + A+ +   M   G +P + T+
Sbjct: 177 ----QAPSALEKMREAGFVLNAYSYNGLIHFLLQSGFCKEALEVYRRMVSEGLKPSLKTF 232

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           + ++         K  +G  ++    G  P + TYTI I  + +   I  A  ++  M  
Sbjct: 233 SALMVASGKRRNIKTVMGLLEEMESMGLRPNIYTYTICIRVLGRDGKIDEAYRIMKRMDD 292

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +GC PD+VTY  L++  C   K DDA+ +   + S   +P+ +TY TLL      G  D 
Sbjct: 293 DGCGPDVVTYTVLIDALCTARKLDDAMCLFTKMKSSSHKPDKVTYVTLLDKFSDCGHLDK 352

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
           V+KI   M    ++P V T+ IL+N LCK G ++ A +  + M  +   P++ TYNT++ 
Sbjct: 353 VEKIWTEMEADGYAPDVVTFTILVNALCKAGRINEAFDLLDTMRKQGVLPNLHTYNTLIS 412

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            L +   L++AL L   +      P   TY  LID   K G   KA+  + +M   GI+P
Sbjct: 413 GLLRANRLDDALDLFSNMESLGVEPTAYTYILLIDYHGKSGHPGKALETFEKMKARGIAP 472

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           + +     ++      ++ EA  +  E+   G    +  Y +++    K  +VD AI++L
Sbjct: 473 NIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTYNMMMKCYSKVGQVDEAIKLL 532

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             M   + +PD  V ++++  +   G  EEA++++ ++ E
Sbjct: 533 SEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEE 572



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 216/472 (45%), Gaps = 36/472 (7%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G    A +  + M  R   P+   C   +  L  + R+ +A  +   +  SG  PD++TY
Sbjct: 453 GHPGKALETFEKMKARGIAPNIVACNASLYSLAEMGRLGEAKAMFNELKSSGLAPDSVTY 512

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           NMM+    K GQ+  AI LL EMS   CEPDVI  N+++ T++  G+ ++A   +     
Sbjct: 513 NMMMKCYSKVGQVDEAIKLLSEMSKVQCEPDVIVINSLIDTLYKAGRVEEAWQMFCRMEE 572

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
               P ++TY IL+  + K+  I +A+++ + M   GCSP+ +T+N+L++  CK  + D 
Sbjct: 573 MNLAPTVVTYNILLAGLGKEGQIQKAVQLFESMNGHGCSPNTITFNTLLDCLCKNDEVDL 632

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRG-------CWDAVDKIL--DIMNEASHSPT 361
           A+ +   + +    P+ +T+NT++H    +         +  + K+L  D +   +  P 
Sbjct: 633 ALKMFYKMTTMNCRPDVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLRPDHVTLCTLLPG 692

Query: 362 V---------------FTYNI-----------LINGLCKYGLVDRAINSFNQMVSKNCQP 395
           V               F Y +           ++ G+      ++AI    ++V +    
Sbjct: 693 VIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICK 752

Query: 396 DIVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           D      ++  LCK    + A  +           P L  YN LIDG  +   +E A  L
Sbjct: 753 DDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNL 812

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M   G +PD  T+ +LI    ++ ++ E  DL  E+  RG K     Y +VI  L K
Sbjct: 813 FEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVK 872

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           S ++D A+ +   ++S  + P    F  ++  +   G  ++A++++  ++ +
Sbjct: 873 SNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHY 924



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 122/490 (24%), Positives = 220/490 (44%), Gaps = 44/490 (8%)

Query: 114  ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
            E D    N ++      G++ +A ++   M   N  P       L+ GL +  +I+KA +
Sbjct: 541  EPDVIVINSLIDTLYKAGRVEEAWQMFCRMEEMNLAPTVVTYNILLAGLGKEGQIQKAVQ 600

Query: 174  VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            + + M   G  P+TIT+N ++  LCK  ++  A+ +  +M+   C PDV+T+NTI+    
Sbjct: 601  LFESMNGHGCSPNTITFNTLLDCLCKNDEVDLALKMFYKMTTMNCRPDVLTFNTIIHGFI 660

Query: 234  DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE------- 286
               + K AI  +  Q++K   P  +T   L+  V K   I  A  + +D   +       
Sbjct: 661  KQNQIKNAIWLFH-QMKKLLRPDHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDR 719

Query: 287  --------------GCSPDIVTYNSLVNFSCKQGKYDDAVL--------------VINNL 318
                          G    I+    LV   C+    DD+VL              V  N+
Sbjct: 720  SFWEDVMGGILTEAGTEKAILFGERLV---CRAICKDDSVLIPIIKVLCKHKKTSVARNV 776

Query: 319  LSR-----GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
              +     G++P    YN L+         +    + + M  A  +P  FTYN LI+   
Sbjct: 777  FVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHG 836

Query: 374  KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
            K G ++   + +++M+++ C+P+ +TYN V+  L K   L++A+ L + L     SP   
Sbjct: 837  KSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPC 896

Query: 434  TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            T+  LIDGL K G ++ A  ++  M+  G  P+   +  L+ G+ +   V+ A +  K +
Sbjct: 897  TFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRM 956

Query: 494  GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
             K G +    +Y +++  LC + +VD A+   E +  +   PD   ++ ++  +     T
Sbjct: 957  VKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRT 1016

Query: 554  EEAYKLWQKL 563
            EEA  L+ ++
Sbjct: 1017 EEALSLFHEM 1026



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/339 (28%), Positives = 166/339 (48%), Gaps = 1/339 (0%)

Query: 156  INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMS 214
            I +I+ L +  +   A  V        GV  T+  YN+++ G  +   +  A  L +EM 
Sbjct: 758  IPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMK 817

Query: 215  VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             +GC PD  TYN+++     +GK  +    + + L +GC P  ITY ++I  + K   + 
Sbjct: 818  SAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKSNRLD 877

Query: 275  RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            +A+++  ++     SP   T+  L++   K G+ DDA  + + ++  G  PNS  YN L+
Sbjct: 878  KAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILV 937

Query: 335  HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            +  G  G  D   +    M +    P + +Y IL++ LC  G VD A++ F ++      
Sbjct: 938  NGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLD 997

Query: 395  PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            PD+V YN ++  L +     EAL L H +      P L TYN+LI  L   G +E+A  +
Sbjct: 998  PDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKI 1057

Query: 455  YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            Y ++   G+ P+  T+  LI G+  +   E A  + K++
Sbjct: 1058 YEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKM 1096



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 153/316 (48%)

Query: 158  LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
            LI G + +  +E A  + + M  +G  PDT TYN ++    K G+I     L DEM   G
Sbjct: 796  LIDGFLEVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRG 855

Query: 218  CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            C+P+ ITYN ++  +  + +  +A+  + + +     P   T+  LI+ + K   +  A 
Sbjct: 856  CKPNTITYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAH 915

Query: 278  EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            E+ D M   GC P+   YN LVN   K G  D A      ++  G+ P+  +Y  L+  L
Sbjct: 916  EMFDGMVHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDIL 975

Query: 338  GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
               G  D      + + +A   P +  YN++INGL +    + A++ F++M ++   PD+
Sbjct: 976  CIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDL 1035

Query: 398  VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
             TYN+++  L   GM+ EA ++   L      P + TYN LI G    G  E A  +Y +
Sbjct: 1036 YTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKK 1095

Query: 458  MMENGISPDDITHRTL 473
            MM  G  P+  T   L
Sbjct: 1096 MMVGGCDPNTGTFAQL 1111



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 111/430 (25%), Positives = 191/430 (44%), Gaps = 2/430 (0%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
            D  T   +L      G++ DA ++  D   +     D  F  +++ G++     EKA   
Sbjct: 682  DHVTLCTLLPGVIKSGQIEDAFRITEDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILF 741

Query: 175  LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMF 233
             + +V      D      ++  LCK  +   A  +  + +   G +P +  YN ++    
Sbjct: 742  GERLVCRAICKDDSVLIPIIKVLCKHKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFL 801

Query: 234  DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +    + A   +++    GC P   TY  LI+   K   I    ++ D+M   GC P+ +
Sbjct: 802  EVHNVEVAWNLFEEMKSAGCAPDTFTYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTI 861

Query: 294  TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            TYN +++   K  + D A+ +  NL+S    P   T+  L+  L   G  D   ++ D M
Sbjct: 862  TYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGM 921

Query: 354  NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                  P    YNIL+NG  K G VD A   F +MV +  +PD+ +Y  ++  LC  G +
Sbjct: 922  VHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRV 981

Query: 414  NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            ++AL     L  +   P L+ YN +I+GL +    E+A+ L+ +M   GI PD  T+ +L
Sbjct: 982  DDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSL 1041

Query: 474  IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
            I        +EEA  + +E+   G K     Y  +I G   S   ++A  + + M+    
Sbjct: 1042 ILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGC 1101

Query: 534  KPDDTVFSTI 543
             P+   F+ +
Sbjct: 1102 DPNTGTFAQL 1111



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 213/454 (46%), Gaps = 9/454 (1%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T N I+  F  + ++ +A  L   M +  + PD      L+ G+I+  +IE A ++ 
Sbjct: 648  DVLTFNTIIHGFIKQNQIKNAIWLFHQMKKLLR-PDHVTLCTLLPGVIKSGQIEDAFRIT 706

Query: 176  Q-IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            +      G   D   +  ++GG+        AI   + +       D      I++ +  
Sbjct: 707  EDFFYQVGSNIDRSFWEDVMGGILTEAGTEKAILFGERLVCRAICKDDSVLIPIIKVLCK 766

Query: 235  NGKFKQAIG-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            + K   A   F K     G  P L  Y +LI+   +   +  A  + ++M   GC+PD  
Sbjct: 767  HKKTSVARNVFVKFTKELGVKPTLKVYNLLIDGFLEVHNVEVAWNLFEEMKSAGCAPDTF 826

Query: 294  TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI- 352
            TYNSL++   K GK ++   + + +L+RG +PN+ITYN ++ +L      + +DK +D+ 
Sbjct: 827  TYNSLIDAHGKSGKINELFDLYDEMLTRGCKPNTITYNMVISNLVKS---NRLDKAMDLY 883

Query: 353  --MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
              +     SPT  T+  LI+GL K G +D A   F+ MV   C+P+   YN ++    K 
Sbjct: 884  YNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGMVHYGCRPNSAIYNILVNGYGKL 943

Query: 411  GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
            G ++ A +    +      P L +Y  L+D L   G ++ A+  + ++ + G+ PD + +
Sbjct: 944  GHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAY 1003

Query: 471  RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
              +I G  R+ + EEA+ L  E+  RG       Y  +I  L     ++ A ++ E +  
Sbjct: 1004 NLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQF 1063

Query: 531  SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               KP+   ++ +++     G +E AY +++K++
Sbjct: 1064 IGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMM 1097



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 63/252 (25%), Positives = 109/252 (43%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N ++ N     +L  A  L   +   +  P       LI GL++  R++ A ++   M
Sbjct: 862  TYNMVISNLVKSNRLDKAMDLYYNLVSGDFSPTPCTFGPLIDGLLKSGRLDDAHEMFDGM 921

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            V  G  P++  YN++V G  K G + +A      M   G  PD+ +Y  ++  +   G+ 
Sbjct: 922  VHYGCRPNSAIYNILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRV 981

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
              A+ +++   + G  P L+ Y ++I  + +      A+ +  +M   G  PD+ TYNSL
Sbjct: 982  DDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSL 1041

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            +      G  ++A  +   L   G++PN  TYN L+      G  +    I   M     
Sbjct: 1042 ILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGC 1101

Query: 359  SPTVFTYNILIN 370
             P   T+  L N
Sbjct: 1102 DPNTGTFAQLPN 1113



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 45/182 (24%), Positives = 79/182 (43%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++  +   G +  A +    M +    PD      L+  L    R++ A    + +  
Sbjct: 934  NILVNGYGKLGHVDTACEFFKRMVKEGIRPDLKSYTILVDILCIAGRVDDALHYFEKLKQ 993

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            +G  PD + YN+M+ GL +  +   A++L  EM   G  PD+ TYN+++  +   G  ++
Sbjct: 994  AGLDPDLVAYNLMINGLGRSQRTEEALSLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEE 1053

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A   +++    G  P + TY  LI           A  +   M + GC P+  T+  L N
Sbjct: 1054 AGKIYEELQFIGLKPNVFTYNALIRGYTLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPN 1113

Query: 301  FS 302
             S
Sbjct: 1114 QS 1115



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 45/154 (29%), Positives = 71/154 (46%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            +  D K+   ++   C  G++ DA    + + +    PD      +I GL R  R E+A 
Sbjct: 961  IRPDLKSYTILVDILCIAGRVDDALHYFEKLKQAGLDPDLVAYNLMINGLGRSQRTEEAL 1020

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             +   M   G VPD  TYN ++  L   G I  A  + +E+   G +P+V TYN ++R  
Sbjct: 1021 SLFHEMQNRGIVPDLYTYNSLILNLGIVGMIEEAGKIYEELQFIGLKPNVFTYNALIRGY 1080

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
              +G  + A G +K  +  GC P   T+  L  Q
Sbjct: 1081 TLSGNSELAYGIYKKMMVGGCDPNTGTFAQLPNQ 1114


>gi|357130030|ref|XP_003566661.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 827

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 244/459 (53%), Gaps = 3/459 (0%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           + +G     D  + N ++  F  +G+++ A  L + M ++  +PD     +++  L +  
Sbjct: 222 AKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKAR 281

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
            ++KA  VL+ MV  G  PD +TYN ++ G    G  + +  +  +M+  G  PD +T++
Sbjct: 282 AMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFS 341

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           + + ++  +G+ K A   ++    KG  P +++Y+IL+     +   A    +   MA +
Sbjct: 342 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADK 401

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDA 345
           G   +    N L++   K+G  D+A+LV   +  +G+ PN +TY+TL+ +    G   DA
Sbjct: 402 GIVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADA 461

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC-QPDIVTYNTVL 404
           ++K   +++     P    Y+ LI+G C +G + +A    ++M+SK   +P+IV +++++
Sbjct: 462 MEKFSQMIS-IGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSII 520

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            +LC EG + +A  + +L+      P ++T+N+LIDG    G MEKA  +   M+  GI 
Sbjct: 521 HSLCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIE 580

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD +T+ TL+ G+C++ ++++ + L +E+  +  K     Y +V+ GL ++ +   A ++
Sbjct: 581 PDVVTNNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKM 640

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              MI S    D   +  ++K +  + +T+EA  L+ KL
Sbjct: 641 FHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 679



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 225/453 (49%), Gaps = 3/453 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N I+  +   G   +++K+   M  +  IPD     + +  L +  R + A 
Sbjct: 298 VEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTVTFSSFMSSLCKHGRSKDAE 357

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ Q M   G +PD ++Y++++ G    G+      L   M+  G   +    N ++   
Sbjct: 358 EIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKGIVSNCHCINILISAH 417

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A+  + +   +G  P ++TY+ LI   C+   +A A+E    M   G  P+ 
Sbjct: 418 AKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMISIGIEPNT 477

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGME-PNSITYNTLLHSLGSRG-CWDAVDKIL 350
             Y+SL++  C  G    A   I+ ++S+G+  PN + +++++HSL   G   DA D + 
Sbjct: 478 AVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDAQD-VF 536

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           +++      PT+ T+N LI+G C  G +++A    + MVS   +PD+VT NT++   CK 
Sbjct: 537 NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSGYCKS 596

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G +++ L L   +      P  +TYN ++DGL + G    A  ++ +M+++G + D  T+
Sbjct: 597 GKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVDIDTY 656

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           + L+ G CR D  +EA+ L  ++G    K   +    +I+ L K ++ + A  +   + +
Sbjct: 657 KILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFAAIST 716

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           S   P+ + +  +++ +  +G  EEA  ++  +
Sbjct: 717 SGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSM 749



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/414 (27%), Positives = 209/414 (50%), Gaps = 6/414 (1%)

Query: 157 NLIRGLIRIDRIEKASKVL-QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
             ++ L    R ++A  VL   M     VPD I+YN ++  LC   + + A+ ++  M+ 
Sbjct: 164 TFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMVQRMAK 223

Query: 216 SG--CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
            G  C PDV+++NT++   F  G+  +A   + + ++KG  P + TY  +++ +CK   +
Sbjct: 224 EGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALCKARAM 283

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVN-FSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
            +A  VL  M  +G  PD VTYN++++ +SC  G + ++  +   + S+G+ P+++T+++
Sbjct: 284 DKAEFVLRQMVDKGVEPDGVTYNAIIHGYSC-SGHWKESAKMFRKMTSKGLIPDTVTFSS 342

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
            + SL   G     ++I   M    H P + +Y+IL++G    G      N F+ M  K 
Sbjct: 343 FMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSMADKG 402

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
              +    N ++ A  K GM++EA+ +   + G    P ++TY+TLI    + G +  AM
Sbjct: 403 IVSNCHCINILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAM 462

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHG 511
             + QM+  GI P+   + +LI GFC    + +A + + E+  +G    N   +  +IH 
Sbjct: 463 EKFSQMISIGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHS 522

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           LC   +V  A  V  L+I    +P    F++++      G  E+A+ +   ++ 
Sbjct: 523 LCIEGRVMDAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVS 576



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 99/346 (28%), Positives = 174/346 (50%), Gaps = 1/346 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++     RG + +A  +   M  +   P+      LI    R+ R+  A +    M+ 
Sbjct: 411 NILISAHAKRGMMDEAMLVFTEMQGQGVRPNVVTYSTLISAFCRMGRLADAMEKFSQMIS 470

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE-PDVITYNTILRTMFDNGKFK 239
            G  P+T  Y+ ++ G C  G +  A   + EM   G   P+++ +++I+ ++   G+  
Sbjct: 471 IGIEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVM 530

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            A   +   +  G  P ++T+  LI+  C    + +A  VLD M   G  PD+VT N+LV
Sbjct: 531 DAQDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLV 590

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK GK DD +++   +L + ++P ++TYN +L  L   G   A  K+   M ++  +
Sbjct: 591 SGYCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTA 650

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             + TY IL+ GLC+  L D AI  F+++ + +C+ DI   NT++ AL K     EA  L
Sbjct: 651 VDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDL 710

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
              ++ S   P + TY  +I  L K+G +E+A  ++  M ++G +P
Sbjct: 711 FAAISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAP 756



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 81/335 (24%), Positives = 160/335 (47%), Gaps = 1/335 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           +E +    + ++  FC  G L  A + I ++M++    P+  F  ++I  L    R+  A
Sbjct: 473 IEPNTAVYHSLIHGFCMHGDLVKAKEFISEMMSKGLHRPNIVFFSSIIHSLCIEGRVMDA 532

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             V  +++  G  P  +T+N ++ G C  G++  A  +LD M   G EPDV+T NT++  
Sbjct: 533 QDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTNNTLVSG 592

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
              +GK    +  +++ L K   P  +TY I+++ + +    + A ++  +M   G + D
Sbjct: 593 YCKSGKIDDGLILFREMLHKKVKPTTVTYNIVLDGLLRAGRTSAAKKMFHEMIDSGTAVD 652

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           I TY  L+   C+    D+A+ + + L +   + +    NT++++L      +  + +  
Sbjct: 653 IDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTMINALYKVRRREEANDLFA 712

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            ++ +   P V TY ++I  L K G V+ A   F+ M    C P     N ++  L ++G
Sbjct: 713 AISTSGLVPNVSTYGVMIRNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG 772

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            + +A   +  ++G+  S    T + L+   + KG
Sbjct: 773 DIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKG 807



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 84/362 (23%), Positives = 161/362 (44%), Gaps = 15/362 (4%)

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP-------PYLITYTILIEQVCKQC 271
           +P V     I R          A   + + LR+G P        +L       + V    
Sbjct: 39  DPQVAFVAAIARVRAGTFCTDDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSN 98

Query: 272 GIARAIEVLDDMAIEGCSPDIV-----TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           G A  + + + +  E   P +      TY  L++  C+  + D     +  LL  G++  
Sbjct: 99  GPALVLALFNRICREEAGPRVAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTG 158

Query: 327 SITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           +I   T L  L  ++   +AVD +L  M+E S  P   +YN +I  LC       A++  
Sbjct: 159 TIQATTFLKCLCHAKRTDEAVDVLLHRMSELSCVPDAISYNTVIKSLCGDSRSQEALDMV 218

Query: 386 NQMVSKN--CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            +M  +   C PD+V++NTV+    K+G +++A  L + +      P + TYN+++D L 
Sbjct: 219 QRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGVVPDVGTYNSIVDALC 278

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K   M+KA  +  QM++ G+ PD +T+  +I G+  +   +E+  + +++  +G      
Sbjct: 279 KARAMDKAEFVLRQMVDKGVEPDGVTYNAIIHGYSCSGHWKESAKMFRKMTSKGLIPDTV 338

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +   +  LCK  +   A ++ + M +  + PD   +S ++   A +G   +   L+  +
Sbjct: 339 TFSSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDIVSYSILLHGYATEGRFADMNNLFHSM 398

Query: 564 IE 565
            +
Sbjct: 399 AD 400



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 59/281 (20%), Positives = 109/281 (38%), Gaps = 50/281 (17%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLG----SRGCWDAVDKILDIMNEASHSP---- 360
           DDA  + + LL +G   ++ + N  L +L     S  C +    +L + N          
Sbjct: 59  DDAHHLFDELLRQGTPVHNRSLNDFLAALARAPDSVSCSNGPALVLALFNRICREEAGPR 118

Query: 361 ----TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
               TV TY IL++  C+    D       +++    +   +   T L  LC     +EA
Sbjct: 119 VAPLTVRTYGILMDCCCRARRPDLGPAFVARLLRAGLKTGTIQATTFLKCLCHAKRTDEA 178

Query: 417 LQ-LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           +  LLH ++  SC P                                   D I++ T+I 
Sbjct: 179 VDVLLHRMSELSCVP-----------------------------------DAISYNTVIK 203

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
             C   + +EA+D+++ + K G +      ++  VIHG  K  +V  A  +   M+    
Sbjct: 204 SLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLFNEMVQKGV 263

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            PD   +++IV  +      ++A  + +++++  V   G T
Sbjct: 264 VPDVGTYNSIVDALCKARAMDKAEFVLRQMVDKGVEPDGVT 304


>gi|449520323|ref|XP_004167183.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 605

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 133/524 (25%), Positives = 242/524 (46%), Gaps = 60/524 (11%)

Query: 100 SHDPSLPSSDGPFVEN-DEKTNNKILQNF----------------CSRGKLT--DASKLI 140
           +H P++PSS+  F      K+ N   QNF                C  G +T   A +  
Sbjct: 25  THSPTIPSSNPHFSSAVHHKSLNVSPQNFNTPISFQQQLSMFLHNCKTGNITATQAFQFF 84

Query: 141 DIMARRNQIPDFHFCINLIRGLIRI----------------------------------- 165
            +M   N  P      +L+ GL +I                                   
Sbjct: 85  HLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNV 144

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           +R+ +   V+  ++  G +PD +TY  ++ GLC   +I  A  L   M   GC P+ ITY
Sbjct: 145 NRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITY 204

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGC------PPYLITYTILIEQVCKQCGIARAIEV 279
            T+++ +   G    A+   ++ L           P +I+Y+I+I+ +CK      A ++
Sbjct: 205 GTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDL 264

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
            ++M ++G +P +++Y SL++  C  GK+++A  + N ++++G++PN +T+N L+  L  
Sbjct: 265 FEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCK 324

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G       +L++M +    P + TYN LI G C  G ++ A   F  M SK C+PD++ 
Sbjct: 325 EGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVIC 384

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  ++   CK   + EA++L + +      P + TY  L+ GL + G +  A  L+G M 
Sbjct: 385 YTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMK 444

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
             GI  D   +   + G C+   + EA++L  ++     K+    +  +I GLCK+ K++
Sbjct: 445 VYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLE 504

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            A ++ E +     +PD   ++ ++ +    G   +A  L+QK+
Sbjct: 505 TAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKM 548



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 228/456 (50%), Gaps = 6/456 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   C+  ++ +   ++  + RR  IPD      LI+GL    RI KA+ +   M
Sbjct: 133 TLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRM 192

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM----SVSGC--EPDVITYNTILRTM 232
              G  P+ ITY  ++ GLC+ G I  A+ L  EM    S+ G   +P VI+Y+ I+  +
Sbjct: 193 QKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDAL 252

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   +++   +G  P +I+YT LI   C       A  + ++M  +G  P++
Sbjct: 253 CKDRREDEARDLFEEMKVQGMTPTVISYTSLIHGFCCGGKWEEAKRLFNEMVNQGVQPNV 312

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VT+N L++  CK+GK  +A  ++  ++ RG+ PN +TYN+L+      G  ++  ++   
Sbjct: 313 VTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVS 372

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P V  Y +LING CK   V+ A+  +N M+    +PD+ TY  +L  L + G 
Sbjct: 373 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 432

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +A +L  ++        L  Y   ++GL K GC+ +AM L+ ++    I  D      
Sbjct: 433 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 492

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C+A ++E A +L +++ +   +     Y ++IH  C+  +V  A  + + M  + 
Sbjct: 493 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 552

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             PD   ++T+++   +    E+  +L   +++  V
Sbjct: 553 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDV 588



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 131/285 (45%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T N ++   C  GK+ +A  L+++M +R  +P+     +LI G   +  +  A 
Sbjct: 308 VQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAR 367

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M   G  PD I Y +++ G CK  ++  A+ L + M   G  PDV TY  +L  +
Sbjct: 368 ELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGL 427

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F  GK   A   +      G P  L  Y I +  +CK   +  A+E+ + +       DI
Sbjct: 428 FQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDI 487

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             +N L++  CK GK + A  +   L    ++P+ +TYN ++H     G     + +   
Sbjct: 488 ECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 547

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
           M +   +P   TY  LI G  +   +++ +   + MV ++   D+
Sbjct: 548 MEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 592


>gi|15217608|ref|NP_171708.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806399|sp|O81908.2|PPR2_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g02060, chloroplastic; Flags: Precursor
 gi|332189251|gb|AEE27372.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 710

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 136/463 (29%), Positives = 234/463 (50%), Gaps = 19/463 (4%)

Query: 123 ILQNFCSRGKLTDASK--LIDIMARRN---QIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++  F  R +  + ++  L  I  R N   ++ D +F  +LIR        +++ K+ Q 
Sbjct: 105 LMLEFLGRARNLNVARNFLFSIERRSNGCVKLQDRYFN-SLIRSYGNAGLFQESVKLFQT 163

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNG 236
           M   G  P  +T+N ++  L KRG+   A  L DEM  + G  PD  T+NT++     N 
Sbjct: 164 MKQMGISPSVLTFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNS 223

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVT 294
              +A   +KD     C P ++TY  +I+ +C+   +  A  VL  M  +     P++V+
Sbjct: 224 MVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVS 283

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +LV   C + + D+AVLV +++LSRG++PN++TYNTL+  L     +D +  IL   N
Sbjct: 284 YTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSEAHRYDEIKDILIGGN 343

Query: 355 EA--SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC---- 408
           +A  + +P   T+NILI   C  G +D A+  F +M++    PD  +Y+ ++  LC    
Sbjct: 344 DAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNE 403

Query: 409 ---KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
               E + NE  +   LL    C P    YN + + L   G  ++A  ++ Q+M+ G+  
Sbjct: 404 FDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ- 462

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D  +++TLI G CR  + + A +LL  + +R        Y L+I GL K  +  +A   L
Sbjct: 463 DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTL 522

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + M+ S Y P  T F +++ ++A      E++ L   ++E ++
Sbjct: 523 QRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEKRI 565



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 126/476 (26%), Positives = 216/476 (45%), Gaps = 44/476 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N +L     RG+   A  L D M R   + PD +    LI G  +   +++A ++ + 
Sbjct: 175 TFNSLLSILLKRGRTGMAHDLFDEMRRTYGVTPDSYTFNTLINGFCKNSMVDEAFRIFKD 234

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM--SVSGCEPDVITYNTILRTMFDN 235
           M +    PD +TYN ++ GLC+ G+++ A  +L  M    +   P+V++Y T++R     
Sbjct: 235 MELYHCNPDVVTYNTIIDGLCRAGKVKIAHNVLSGMLKKATDVHPNVVSYTTLVRGYCMK 294

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG------CS 289
            +  +A+  + D L +G  P  +TY  LI+ + +    A   + + D+ I G       +
Sbjct: 295 QEIDEAVLVFHDMLSRGLKPNAVTYNTLIKGLSE----AHRYDEIKDILIGGNDAFTTFA 350

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD  T+N L+   C  G  D A+ V   +L+  + P+S +Y+ L+ +L  R  +D  + +
Sbjct: 351 PDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCMRNEFDRAETL 410

Query: 350 LD-------IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            +       ++ +    P    YN +   LC  G   +A   F Q++ +  Q D  +Y T
Sbjct: 411 FNELFEKEVLLGKDECKPLAAAYNPMFEYLCANGKTKQAEKVFRQLMKRGVQ-DPPSYKT 469

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   C+EG    A +LL L+      P L TY  LIDGL K G    A     +M+ + 
Sbjct: 470 LITGHCREGKFKPAYELLVLMLRREFVPDLETYELLIDGLLKIGEALLAHDTLQRMLRSS 529

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK--SKKVDM 520
             P   T  +                +L E+ KR  K  N ++ LV   L K   + +D+
Sbjct: 530 YLPVATTFHS----------------VLAELAKR--KFANESFCLVTLMLEKRIRQNIDL 571

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
           + QV+ L+ SS  K    +   IV+ + D+G   +  +L   L E +      TL+
Sbjct: 572 STQVVRLLFSSAQKEKAFL---IVRLLYDNGYLVKMEELLGYLCENRKLLDAHTLV 624



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 107/503 (21%), Positives = 203/503 (40%), Gaps = 80/503 (15%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N ++  FC    + +A ++   M   +  PD      +I GL R  +++ A 
Sbjct: 205 VTPDSYTFNTLINGFCKNSMVDEAFRIFKDMELYHCNPDVVTYNTIIDGLCRAGKVKIAH 264

Query: 173 KVLQIMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
            VL  M+       P+ ++Y  +V G C + +I  A+ +  +M   G +P+ +TYNT+++
Sbjct: 265 NVLSGMLKKATDVHPNVVSYTTLVRGYCMKQEIDEAVLVFHDMLSRGLKPNAVTYNTLIK 324

Query: 231 ----------------------TMF---------------DNGKFKQAIGFWKDQLRKGC 253
                                 T F               D G    A+  +++ L    
Sbjct: 325 GLSEAHRYDEIKDILIGGNDAFTTFAPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKL 384

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDM-------AIEGCSPDIVTYNSLVNFSCKQG 306
            P   +Y++LI  +C +    RA  + +++         + C P    YN +  + C  G
Sbjct: 385 HPDSASYSVLIRTLCMRNEFDRAETLFNELFEKEVLLGKDECKPLAAAYNPMFEYLCANG 444

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K   A  V   L+ RG++ +  +Y TL+      G +    ++L +M      P + TY 
Sbjct: 445 KTKQAEKVFRQLMKRGVQ-DPPSYKTLITGHCREGKFKPAYELLVLMLRREFVPDLETYE 503

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           +LI+GL K G    A ++  +M+  +  P   T+++VL  L K    NE+  L+ L+   
Sbjct: 504 LLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELAKRKFANESFCLVTLMLEK 563

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG--ISPDDI---------------- 468
                +     ++  L      EKA ++   + +NG  +  +++                
Sbjct: 564 RIRQNIDLSTQVVRLLFSSAQKEKAFLIVRLLYDNGYLVKMEELLGYLCENRKLLDAHTL 623

Query: 469 --------------THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
                         T  T+I G C+  +  EA  L  E+ + GN  + S + ++ + L  
Sbjct: 624 VLFCLEKSQMVDIDTCNTVIEGLCKHKRHSEAFSLYNELVELGNHQQLSCHVVLRNALEA 683

Query: 515 SKKVDMAIQVLELMISSRYKPDD 537
           + K +  +Q +   +++  + DD
Sbjct: 684 AGKWE-ELQFVSKRMATLRESDD 705


>gi|356538593|ref|XP_003537787.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09820-like [Glycine max]
          Length = 583

 Score =  207 bits (527), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 114/415 (27%), Positives = 211/415 (50%), Gaps = 7/415 (1%)

Query: 145 RRNQIPDFHFCIN----LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           RR Q   F   +N    L+  L++ +   +   V + M+     P+  T+N+ + GLCK 
Sbjct: 154 RRVQDYGFKLSLNSCNPLLSALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKA 213

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILR---TMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           G++  A  +++++   G  P+++TYNT++         GK  +A    K+ L     P  
Sbjct: 214 GKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNE 273

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           IT+  LI+  CK   +  A    ++M  +G  P+IVTYNSL+N     GK D+A+ + + 
Sbjct: 274 ITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDK 333

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           ++  G++PN +T+N L++    +       K+ D + E    P   T+N +I+  CK G+
Sbjct: 334 MVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGM 393

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           ++      N M+ +   P++ TYN ++  LC+   +  A +LL+ +        ++TYN 
Sbjct: 394 MEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNI 453

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI G  K G   KA  L G+M+  G+ P+ +T+ TL+ G+C    ++ A+ +  ++ K G
Sbjct: 454 LIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEKEG 513

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
            +     Y ++I G CK+ K++ A ++L  M+     P+ T +  +  ++ + G 
Sbjct: 514 KRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGF 568



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/355 (30%), Positives = 184/355 (51%), Gaps = 3/355 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR---IDRIEKASKVL 175
           T N  +   C  GKL  A  +I+ +      P+      LI G  +     ++ +A  +L
Sbjct: 202 TFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRADAIL 261

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+ +   P+ IT+N ++ G CK   + +A    +EM   G +P+++TYN+++  + +N
Sbjct: 262 KEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNN 321

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +AI  W   +  G  P ++T+  LI   CK+  I  A ++ DD+A +   P+ +T+
Sbjct: 322 GKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITF 381

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++  CK G  ++   + N++L  G+ PN  TYN L+  L       A  K+L+ M  
Sbjct: 382 NTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMEN 441

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 V TYNILI G CK G   +A     +M++   +P+ VTYNT++   C EG L  
Sbjct: 442 YELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKA 501

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           AL++   +        ++TYN LI G  K G +E A  L  +M+E G++P+  T+
Sbjct: 502 ALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTY 556



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 196/369 (53%), Gaps = 3/369 (0%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR-- 200
           M +R   P+       I GL +  ++ KA  V++ +   G  P+ +TYN ++ G CK+  
Sbjct: 191 MIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGS 250

Query: 201 -GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
            G++  A A+L EM  +   P+ IT+NT++     +     A   +++  R+G  P ++T
Sbjct: 251 AGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVT 310

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           Y  LI  +     +  AI + D M   G  P+IVT+N+L+N  CK+    +A  + +++ 
Sbjct: 311 YNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIA 370

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            + + PN+IT+NT++ +    G  +    + + M +    P V TYN LI GLC+   V 
Sbjct: 371 EQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVR 430

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A    N+M +   + D+VTYN ++G  CK+G  ++A +LL  +      P  +TYNTL+
Sbjct: 431 AAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLM 490

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DG   +G ++ A+ +  QM + G   + +T+  LI GFC+  ++E+A  LL E+ ++G  
Sbjct: 491 DGYCMEGNLKAALKVRTQMEKEGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLN 550

Query: 500 MRNSAYRLV 508
              + Y +V
Sbjct: 551 PNRTTYDVV 559



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/393 (29%), Positives = 196/393 (49%), Gaps = 5/393 (1%)

Query: 172 SKVLQIMVMSGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           S V   +++ G  P  + +  +M+V       +I SA  +   +   G +  + + N +L
Sbjct: 113 SSVFHSLLLGGDRPCANALITDMLVLAYVTNLEIHSACEVFRRVQDYGFKLSLNSCNPLL 172

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +    +  +    +K+ +++   P L T+ I I  +CK   + +A +V++D+   G S
Sbjct: 173 SALVKGNETGEMQYVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFS 232

Query: 290 PDIVTYNSLVNFSCKQ---GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           P+IVTYN+L++  CK+   GK   A  ++  +L+  + PN IT+NTL+          A 
Sbjct: 233 PNIVTYNTLIDGHCKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAA 292

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
               + M      P + TYN LINGL   G +D AI  +++MV    +P+IVT+N ++  
Sbjct: 293 KNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALING 352

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK+ M+ EA +L   +      P  IT+NT+ID   K G ME+   L+  M++ GI P+
Sbjct: 353 FCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPN 412

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             T+  LI G CR   V  A  LL E+     K     Y ++I G CK  +   A ++L 
Sbjct: 413 VSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLG 472

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            M++   KP+   ++T++     +G  + A K+
Sbjct: 473 EMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKV 505



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/314 (29%), Positives = 155/314 (49%), Gaps = 2/314 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++  FC    +  A    + M R+   P+     +LI GL    ++++A  + 
Sbjct: 272 NEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLINGLSNNGKLDEAIALW 331

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  P+ +T+N ++ G CK+  I+ A  L D+++     P+ IT+NT++      
Sbjct: 332 DKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPNAITFNTMIDAFCKA 391

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++        L +G  P + TY  LI  +C+   +  A ++L++M       D+VTY
Sbjct: 392 GMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCRNQNVRAAKKLLNEMENYELKADVVTY 451

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+   CK G+   A  ++  +L+ G++PN +TYNTL+      G   A  K+   M +
Sbjct: 452 NILIGGWCKDGEPSKAEKLLGEMLNVGVKPNHVTYNTLMDGYCMEGNLKAALKVRTQMEK 511

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 V TYN+LI G CK G ++ A    N+M+ K   P+  TY+ V   + ++G + +
Sbjct: 512 EGKRANVVTYNVLIKGFCKTGKLEDANRLLNEMLEKGLNPNRTTYDVVRLEMLEKGFIPD 571

Query: 416 ALQLLHLLNGSSCS 429
                HL N SS S
Sbjct: 572 IEG--HLYNISSMS 583



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 85/350 (24%), Positives = 158/350 (45%), Gaps = 39/350 (11%)

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
           C   LIT  +++  V     I  A EV   +   G    + + N L++   K  +  +  
Sbjct: 127 CANALITDMLVLAYVT-NLEIHSACEVFRRVQDYGFKLSLNSCNPLLSALVKGNETGEMQ 185

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            V   ++ R ++PN  T+N  ++ L   G  +  + +++ +     SP + TYN LI+G 
Sbjct: 186 YVYKEMIKRRIQPNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGH 245

Query: 373 CKYGLVD---RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           CK G      RA     +M++    P+ +T+NT++   CK+  +  A      +      
Sbjct: 246 CKKGSAGKMYRADAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLK 305

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P ++TYN+LI+GL+  G +++A+ L+ +M+  G+ P+ +T   LI GFC+   ++EA  L
Sbjct: 306 PNIVTYNSLINGLSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKL 365

Query: 490 LKEIGKR------------------------GNKMRN-----------SAYRLVIHGLCK 514
             +I ++                        G  + N           S Y  +I GLC+
Sbjct: 366 FDDIAEQDLVPNAITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVSTYNCLIAGLCR 425

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           ++ V  A ++L  M +   K D   ++ ++     DG   +A KL  +++
Sbjct: 426 NQNVRAAKKLLNEMENYELKADVVTYNILIGGWCKDGEPSKAEKLLGEML 475



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 63/218 (28%), Positives = 112/218 (51%), Gaps = 3/218 (1%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG---MLNEA 416
           P + T+NI INGLCK G +++A +    + +    P+IVTYNT++   CK+G    +  A
Sbjct: 198 PNLTTFNIFINGLCKAGKLNKAEDVIEDIKAWGFSPNIVTYNTLIDGHCKKGSAGKMYRA 257

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             +L  +  +   P  IT+NTLIDG  K   +  A   + +M   G+ P+ +T+ +LI G
Sbjct: 258 DAILKEMLANKICPNEITFNTLIDGFCKDENVLAAKNAFEEMQRQGLKPNIVTYNSLING 317

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
                +++EA+ L  ++   G K     +  +I+G CK K +  A ++ + +      P+
Sbjct: 318 LSNNGKLDEAIALWDKMVGLGLKPNIVTFNALINGFCKKKMIKEARKLFDDIAEQDLVPN 377

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
              F+T++      GM EE + L   +++  +F   +T
Sbjct: 378 AITFNTMIDAFCKAGMMEEGFALHNSMLDEGIFPNVST 415


>gi|125542535|gb|EAY88674.1| hypothetical protein OsI_10149 [Oryza sativa Indica Group]
          Length = 333

 Score =  207 bits (526), Expect = 1e-50,   Method: Compositional matrix adjust.
 Identities = 110/323 (34%), Positives = 179/323 (55%)

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+ M   G VPD + Y M++GG C+ G +  A+ + DEM   GC PDV+TYNT+L  +  
Sbjct: 4   LREMRCFGLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCK 63

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             +   A G   +   +G PP L T+T LI   C +  + +A+++ D M  +   PDIVT
Sbjct: 64  ERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVT 123

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L++  C+QG  D A  + +++ SR + PN +TY+ L+ S   +G  +     LD M 
Sbjct: 124 YNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMI 183

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P + TYN +I G C+ G V +      +M+     PD++TYNT++    KE  ++
Sbjct: 184 NKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMH 243

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A +LL+++      P ++TYN LI+G +  G +++A  ++ +M   GI PD  T+ ++I
Sbjct: 244 DAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMI 303

Query: 475 WGFCRADQVEEAVDLLKEIGKRG 497
            G   A   +EA  L  E+ +RG
Sbjct: 304 NGHVTAGNSKEAFQLHDEMLQRG 326



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 98/319 (30%), Positives = 165/319 (51%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +PD      +I G  R   +  A +V   MV  G +PD +TYN ++ GLCK  ++  A  
Sbjct: 13  VPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEG 72

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           LL+EM   G  PD+ T+ T++      GK  +A+  +   L +   P ++TY  LI+ +C
Sbjct: 73  LLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMC 132

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           +Q  + +A ++ DDM      P+ VTY+ L++  C++G+ +DA   ++ ++++G+ PN +
Sbjct: 133 RQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIM 192

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TYN+++      G      K L  M     SP + TYN LI+G  K   +  A    N M
Sbjct: 193 TYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMM 252

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             +  QPD+VTYN ++      G + EA  +   +      P   TY ++I+G    G  
Sbjct: 253 EKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNS 312

Query: 449 EKAMVLYGQMMENGISPDD 467
           ++A  L+ +M++ G +PDD
Sbjct: 313 KEAFQLHDEMLQRGFAPDD 331



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 171/314 (54%)

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P  + YT++I   C+   ++ A+ V D+M   GC PD+VTYN+L+N  CK+ +  DA
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             ++N +  RG+ P+  T+ TL+H     G  D   ++ D M      P + TYN LI+G
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           +C+ G +D+A + ++ M S+   P+ VTY+ ++ + C++G + +A   L  +      P 
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           ++TYN++I G  + G + K      +MM N +SPD IT+ TLI G+ + D++ +A  LL 
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            + K   +     Y ++I+G      V  A  + E M +   +PD   + +++      G
Sbjct: 251 MMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAG 310

Query: 552 MTEEAYKLWQKLIE 565
            ++EA++L  ++++
Sbjct: 311 NSKEAFQLHDEMLQ 324



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 93/297 (31%), Positives = 147/297 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC  G ++DA ++ D M     +PD      L+ GL +  R+  A  +L  M   G
Sbjct: 22  VIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGLLNEMRERG 81

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  T+  ++ G C  G++  A+ L D M      PD++TYNT++  M   G   +A 
Sbjct: 82  VPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCRQGDLDKAN 141

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             W D   +   P  +TY+ILI+  C++  +  A   LD+M  +G  P+I+TYNS++   
Sbjct: 142 DLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPNIMTYNSIIKGY 201

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G        +  ++   + P+ ITYNTL+H            K+L++M +    P V
Sbjct: 202 CRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDV 261

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
            TYN+LING   +G V  A   F +M +K  +PD  TY +++      G   EA QL
Sbjct: 262 VTYNMLINGFSVHGNVQEAGWIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQL 318



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 78/281 (27%), Positives = 139/281 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C   +L DA  L++ M  R   PD      LI G     +++KA ++ 
Sbjct: 50  DVVTYNTLLNGLCKERRLLDAEGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLF 109

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+     PD +TYN ++ G+C++G +  A  L D+M      P+ +TY+ ++ +  + 
Sbjct: 110 DTMLNQRLRPDIVTYNTLIDGMCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEK 169

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ + A GF  + + KG  P ++TY  +I+  C+   +++  + L  M +   SPD++TY
Sbjct: 170 GQVEDAFGFLDEMINKGILPNIMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITY 229

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++   K+ K  DA  ++N +    ++P+ +TYN L++     G       I + M  
Sbjct: 230 NTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAGWIFEKMCA 289

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               P  +TY  +ING    G    A    ++M+ +   PD
Sbjct: 290 KGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 75/247 (30%), Positives = 123/247 (49%)

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G+ P+ + Y  ++      G      ++ D M      P V TYN L+NGLCK   +  A
Sbjct: 11  GLVPDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDA 70

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
               N+M  +   PD+ T+ T++   C EG L++ALQL   +      P ++TYNTLIDG
Sbjct: 71  EGLLNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDG 130

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           + ++G ++KA  L+  M    I P+ +T+  LI   C   QVE+A   L E+  +G    
Sbjct: 131 MCRQGDLDKANDLWDDMHSREIFPNHVTYSILIDSHCEKGQVEDAFGFLDEMINKGILPN 190

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y  +I G C+S  V    + L+ M+ ++  PD   ++T++     +    +A+KL  
Sbjct: 191 IMTYNSIIKGYCRSGNVSKGQKFLQKMMVNKVSPDLITYNTLIHGYIKEDKMHDAFKLLN 250

Query: 562 KLIEWKV 568
            + + KV
Sbjct: 251 MMEKEKV 257



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 41/145 (28%), Positives = 76/145 (52%)

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  + Y  +I G  + G M  A+ +  +M+  G  PD +T+ TL+ G C+  ++ +A  L
Sbjct: 14  PDGVIYTMVIGGFCRAGLMSDALRVRDEMVGCGCLPDVVTYNTLLNGLCKERRLLDAEGL 73

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L E+ +RG       +  +IHG C   K+D A+Q+ + M++ R +PD   ++T++  +  
Sbjct: 74  LNEMRERGVPPDLCTFTTLIHGYCIEGKLDKALQLFDTMLNQRLRPDIVTYNTLIDGMCR 133

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTT 574
            G  ++A  LW  +   ++F    T
Sbjct: 134 QGDLDKANDLWDDMHSREIFPNHVT 158



 Score = 52.4 bits (124), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 33/109 (30%), Positives = 48/109 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N ++  +    K+ DA KL+++M +    PD      LI G      +++A 
Sbjct: 222 VSPDLITYNTLIHGYIKEDKMHDAFKLLNMMEKEKVQPDVVTYNMLINGFSVHGNVQEAG 281

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
            + + M   G  PD  TY  M+ G    G  + A  L DEM   G  PD
Sbjct: 282 WIFEKMCAKGIEPDRYTYMSMINGHVTAGNSKEAFQLHDEMLQRGFAPD 330


>gi|193806393|sp|P0C7Q7.1|PPR38_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial; Flags: Precursor
          Length = 602

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/395 (28%), Positives = 208/395 (52%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  VL  ++  G  PDT T+N ++ GL   G++  A+ L+D M  +GC+PDV+TYN+I+ 
Sbjct: 142 AYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVN 201

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +  +G    A+   +    +     + TY+ +I+ +C+   I  AI +  +M  +G   
Sbjct: 202 GICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKS 261

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            +VTYNSLV   CK GK++D  L++ +++SR + PN IT+N LL      G     +++ 
Sbjct: 262 SVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELY 321

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M     SP + TYN L++G C    +  A N  + MV   C PDIVT+ +++   C  
Sbjct: 322 KEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMV 381

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             +++ +++   ++        +TY+ L+ G  + G ++ A  L+ +M+ +G+ PD +T+
Sbjct: 382 KRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTY 441

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             L+ G C   ++E+A+++ +++ K    +    Y  +I G+CK  KV+ A  +   +  
Sbjct: 442 GILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPC 501

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              KP+   ++ ++  +   G   EA  L +K+ E
Sbjct: 502 KGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEE 536



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/404 (31%), Positives = 198/404 (49%), Gaps = 4/404 (0%)

Query: 113 VEN----DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           VEN    D  T N I+   C  G  + A  L+  M  RN   D      +I  L R   I
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A  + + M   G     +TYN +V GLCK G+      LL +M      P+VIT+N +
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L      GK ++A   +K+ + +G  P +ITY  L++  C Q  ++ A  +LD M    C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           SPDIVT+ SL+   C   + DD + V  N+  RG+  N++TY+ L+      G     ++
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M      P V TY IL++GLC  G +++A+  F  +        IV Y T++  +C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G + +A  L   L      P ++TY  +I GL KKG + +A +L  +M E+G +P+D 
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           T+ TLI    R   +  +  L++E+   G     S+ ++VI  L
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEMKSCGFSADASSIKMVIDML 588



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 221/445 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC   K   A  ++  + +    PD      LI+GL    ++ +A  ++  M
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V +G  PD +TYN +V G+C+ G    A+ LL +M     + DV TY+TI+ ++  +G  
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI  +K+   KG    ++TY  L+  +CK         +L DM      P+++T+N L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK  +A  +   +++RG+ PN ITYNTL+     +      + +LD+M     
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP + T+  LI G C    VD  +  F  +  +    + VTY+ ++   C+ G +  A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P ++TY  L+DGL   G +EKA+ ++  + ++ +    + + T+I G C
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +VE+A +L   +  +G K     Y ++I GLCK   +  A  +L  M      P+D 
Sbjct: 485 KGGKVEDAWNLFCSLPCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDC 544

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++T+++    DG    + KL +++
Sbjct: 545 TYNTLIRAHLRDGDLTASAKLIEEM 569



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/435 (25%), Positives = 228/435 (52%), Gaps = 6/435 (1%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTI 188
           K  DA  L   M R   +P     ++  R    I R ++ + VL     + ++G   +  
Sbjct: 68  KKDDAIALFQEMIRSRPLPSL---VDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIY 124

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T N+M+   C+  +   A ++L ++   G EPD  T+NT+++ +F  GK  +A+      
Sbjct: 125 TLNIMINCFCRCCKTCFAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRM 184

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  GC P ++TY  ++  +C+    + A+++L  M       D+ TY+++++  C+ G  
Sbjct: 185 VENGCQPDVVTYNSIVNGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCI 244

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           D A+ +   + ++G++ + +TYN+L+  L   G W+    +L  M      P V T+N+L
Sbjct: 245 DAAISLFKEMETKGIKSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVL 304

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           ++   K G +  A   + +M+++   P+I+TYNT++   C +  L+EA  +L L+  + C
Sbjct: 305 LDVFVKEGKLQEANELYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKC 364

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           SP ++T+ +LI G      ++  M ++  + + G+  + +T+  L+ GFC++ +++ A +
Sbjct: 365 SPDIVTFTSLIKGYCMVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEE 424

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L +E+   G       Y +++ GLC + K++ A+++ E +  S+      +++TI++ + 
Sbjct: 425 LFQEMVSHGVLPDVMTYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMC 484

Query: 549 DDGMTEEAYKLWQKL 563
             G  E+A+ L+  L
Sbjct: 485 KGGKVEDAWNLFCSL 499



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/431 (26%), Positives = 215/431 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N +++     GK+++A  L+D M      PD     +++ G+ R      A  
Sbjct: 155 EPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIVNGICRSGDTSLALD 214

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ M       D  TY+ ++  LC+ G I +AI+L  EM   G +  V+TYN+++R + 
Sbjct: 215 LLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIKSSVVTYNSLVRGLC 274

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK+       KD + +   P +IT+ +L++   K+  +  A E+  +M   G SP+I+
Sbjct: 275 KAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANELYKEMITRGISPNII 334

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L++  C Q +  +A  +++ ++     P+ +T+ +L+         D   K+   +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           ++        TY+IL+ G C+ G +  A   F +MVS    PD++TY  +L  LC  G L
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +AL++   L  S     ++ Y T+I+G+ K G +E A  L+  +   G+ P+ +T+  +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+   + EA  LL+++ + GN   +  Y  +I    +   +  + +++E M S  +
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574

Query: 534 KPDDTVFSTIV 544
             D +    ++
Sbjct: 575 SADASSIKMVI 585



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/368 (26%), Positives = 178/368 (48%), Gaps = 12/368 (3%)

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDV-------ITYNTILRTMFDNGKFKQAIGFWKDQL 249
           L K G +R+ +        S CE D        + +   LR+   + K   AI  +++ +
Sbjct: 21  LLKTGSLRTDLLCTISSFFSSCERDFSSISNGNVCFRERLRSGIVDIKKDDAIALFQEMI 80

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R    P L+ ++     + +       ++    + + G + +I T N ++N  C+  K  
Sbjct: 81  RSRPLPSLVDFSRFFSAIARTKQFNLVLDFCKQLELNGIAHNIYTLNIMINCFCRCCKTC 140

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A  V+  ++  G EP++ T+NTL+  L   G       ++D M E    P V TYN ++
Sbjct: 141 FAYSVLGKVMKLGYEPDTTTFNTLIKGLFLEGKVSEAVVLVDRMVENGCQPDVVTYNSIV 200

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           NG+C+ G    A++   +M  +N + D+ TY+T++ +LC++G ++ A+ L   +      
Sbjct: 201 NGICRSGDTSLALDLLRKMEERNVKADVFTYSTIIDSLCRDGCIDAAISLFKEMETKGIK 260

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
             ++TYN+L+ GL K G      +L   M+   I P+ IT   L+  F +  +++EA +L
Sbjct: 261 SSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANEL 320

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK---- 545
            KE+  RG       Y  ++ G C   ++  A  +L+LM+ ++  PD   F++++K    
Sbjct: 321 YKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCM 380

Query: 546 -KVADDGM 552
            K  DDGM
Sbjct: 381 VKRVDDGM 388



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 78/272 (28%), Positives = 145/272 (53%), Gaps = 4/272 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C + +L++A+ ++D+M R    PD     +LI+G   + R++   KV + +
Sbjct: 335 TYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYCMVKRVDDGMKVFRNI 394

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G V + +TY+++V G C+ G+I+ A  L  EM   G  PDV+TY  +L  + DNGK 
Sbjct: 395 SKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVMTYGILLDGLCDNGKL 454

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+  ++D  +      ++ YT +IE +CK   +  A  +   +  +G  P+++TY  +
Sbjct: 455 EKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSLPCKGVKPNVMTYTVM 514

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G   +A +++  +   G  PN  TYNTL+ +    G   A  K+++ M     
Sbjct: 515 ISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDLTASAKLIEEMKSCGF 574

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           S    +  ++I+ L   G +D+   SF  M+S
Sbjct: 575 SADASSIKMVIDMLLS-GELDK---SFLDMLS 602



 Score =  121 bits (304), Expect = 9e-25,   Method: Compositional matrix adjust.
 Identities = 85/329 (25%), Positives = 158/329 (48%), Gaps = 2/329 (0%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVE--NDEKTNNKILQNFCSRGKLTDASK 138
           +S V+  N  +RGL    K +D +L   D    E   +  T N +L  F   GKL +A++
Sbjct: 260 KSSVVTYNSLVRGLCKAGKWNDGALLLKDMVSREIVPNVITFNVLLDVFVKEGKLQEANE 319

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L   M  R   P+      L+ G    +R+ +A+ +L +MV +   PD +T+  ++ G C
Sbjct: 320 LYKEMITRGISPNIITYNTLMDGYCMQNRLSEANNMLDLMVRNKCSPDIVTFTSLIKGYC 379

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
              ++   + +   +S  G   + +TY+ +++    +GK K A   +++ +  G  P ++
Sbjct: 380 MVKRVDDGMKVFRNISKRGLVANAVTYSILVQGFCQSGKIKLAEELFQEMVSHGVLPDVM 439

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY IL++ +C    + +A+E+ +D+        IV Y +++   CK GK +DA  +  +L
Sbjct: 440 TYGILLDGLCDNGKLEKALEIFEDLQKSKMDLGIVMYTTIIEGMCKGGKVEDAWNLFCSL 499

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             +G++PN +TY  ++  L  +G     + +L  M E  ++P   TYN LI    + G +
Sbjct: 500 PCKGVKPNVMTYTVMISGLCKKGSLSEANILLRKMEEDGNAPNDCTYNTLIRAHLRDGDL 559

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
             +     +M S     D  +   V+  L
Sbjct: 560 TASAKLIEEMKSCGFSADASSIKMVIDML 588


>gi|413953163|gb|AFW85812.1| hypothetical protein ZEAMMB73_202457 [Zea mays]
          Length = 731

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 226/454 (49%), Gaps = 19/454 (4%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           S   LT A +  D M      P+ +    L+R L      ++A  +L+ M  +G  P+ +
Sbjct: 167 SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEALSILRDMRGAGCGPNVV 226

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TYN +V    + G++  A  L+  M   G +P+++T+N+++  M   GK + A   + + 
Sbjct: 227 TYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMCKAGKMEDARKVFDEM 286

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +R+G  P  ++Y  L+   CK      A+ V  +M  +G  PD+VT+ SL++  CK G  
Sbjct: 287 VREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVVTFTSLIHVMCKAGNL 346

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI--MNEASHSPTVFTYN 366
           + AV ++  +  RG++ N +T+  L+     +G  D  D +L +  M +    P+V  YN
Sbjct: 347 ERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLD--DALLAVRGMKQCRIKPSVVCYN 404

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LING C  G +D A    ++M +K  +PD+VTY+T++ A CK    + A +L   +   
Sbjct: 405 ALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDTHSAFELNQQMLEK 464

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P  ITY++LI  L  +  +  A VL+  M++ G+ PD+ T+ +LI G C+   VE A
Sbjct: 465 GVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSLIDGHCKEGNVESA 524

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS----- 541
           + L  ++ K G       Y ++I+GL KS +   A Q+L  +      P +T +      
Sbjct: 525 LSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDPIPANTKYDALMHC 584

Query: 542 ----------TIVKKVADDGMTEEAYKLWQKLIE 565
                      ++K     G+  EA K++Q +++
Sbjct: 585 CRKAELKSVLALLKGFCMKGLMNEADKVYQSMLD 618



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 145/538 (26%), Positives = 254/538 (47%), Gaps = 59/538 (10%)

Query: 84  VLAVNKKL-----RGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           VLA N  L       LT  ++  D  L  SDG  V  +  T N +++  C RG   +A  
Sbjct: 156 VLAYNAVLLALSDASLTSARRFFDSML--SDG--VAPNVYTYNILVRALCGRGHRKEALS 211

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           ++  M      P+      L+    R   ++ A +++ +M   G  P+ +T+N MV G+C
Sbjct: 212 ILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNGMC 271

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K G++  A  + DEM   G  PD ++YNT++      G   +A+  + +  +KG  P ++
Sbjct: 272 KAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPDVV 331

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T+T LI  +CK   + RA+ ++  M   G   + VT+ +L++  CK+G  DDA+L +  +
Sbjct: 332 TFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVRGM 391

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
               ++P+ + YN L++     G  D   ++L  M      P V TY+ +I+  CK    
Sbjct: 392 KQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNCDT 451

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A     QM+ K   PD +TY++++  LC E  L++A  L   +      P   TY +L
Sbjct: 452 HSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGLQPDEFTYTSL 511

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF--------------------- 477
           IDG  K+G +E A+ L+ +M++ G+ PD +T+  LI G                      
Sbjct: 512 IDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQLLFKLYHEDP 571

Query: 478 -------------CRADQVEEAVDLLKEIGKRG-----NKM------RN-----SAYRLV 508
                        CR  +++  + LLK    +G     +K+      RN     S Y ++
Sbjct: 572 IPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNWNLDGSVYSVL 631

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           IHG C++  V  A+   + M+   + P+ T   ++++ + ++GM  EA ++ Q+L+ +
Sbjct: 632 IHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQVIQQLLNY 689



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 99/350 (28%), Positives = 178/350 (50%), Gaps = 1/350 (0%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P V+ YN +L  + D      A  F+   L  G  P + TY IL+  +C +     A
Sbjct: 151 GYVPSVLAYNAVLLALSD-ASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + +L DM   GC P++VTYN+LV    + G+ D A  ++  +   G++PN +T+N++++ 
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           +   G  +   K+ D M     +P   +YN L+ G CK G    A++ F +M  K   PD
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +VT+ +++  +CK G L  A+ L+  +         +T+  LIDG  KKG ++ A++   
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDALLAVR 389

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M +  I P  + +  LI G+C   +++EA +LL E+  +G K     Y  +I   CK+ 
Sbjct: 390 GMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCKNC 449

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
               A ++ + M+     PD   +S++++ +  +    +A+ L++ +I+ 
Sbjct: 450 DTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKL 499



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 98/325 (30%), Positives = 174/325 (53%), Gaps = 5/325 (1%)

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P ++ Y  ++  +     +  A    D M  +G +P++ TYN LV   C +G   +A
Sbjct: 151 GYVPSVLAYNAVLLAL-SDASLTSARRFFDSMLSDGVAPNVYTYNILVRALCGRGHRKEA 209

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + ++ ++   G  PN +TYNTL+ +    G  D  ++++ +M E    P + T+N ++NG
Sbjct: 210 LSILRDMRGAGCGPNVVTYNTLVAAFFRAGEVDGAERLVGMMREGGLKPNLVTFNSMVNG 269

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           +CK G ++ A   F++MV +   PD V+YNT++G  CK G  +EAL +   +      P 
Sbjct: 270 MCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEMTQKGIMPD 329

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           ++T+ +LI  + K G +E+A+ L  QM E G+  +++T   LI GFC+   +++A  LL 
Sbjct: 330 VVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFLDDA--LLA 387

Query: 492 EIGKRGNKMRNSA--YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             G +  +++ S   Y  +I+G C   ++D A ++L  M +   KPD   +STI+     
Sbjct: 388 VRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTIISAYCK 447

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTT 574
           +  T  A++L Q+++E  V     T
Sbjct: 448 NCDTHSAFELNQQMLEKGVLPDAIT 472



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 104/464 (22%), Positives = 180/464 (38%), Gaps = 85/464 (18%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK+ DA K+ D M R    PD      L+ G  +     +A  V   M
Sbjct: 262 TFNSMVNGMCKAGKMEDARKVFDEMVREGLAPDGVSYNTLVGGYCKAGCSHEALSVFAEM 321

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE------------------- 219
              G +PD +T+  ++  +CK G +  A+ L+ +M   G +                   
Sbjct: 322 TQKGIMPDVVTFTSLIHVMCKAGNLERAVTLVRQMRERGLQMNEVTFTALIDGFCKKGFL 381

Query: 220 ----------------PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                           P V+ YN ++      G+  +A     +   KG  P ++TY+ +
Sbjct: 382 DDALLAVRGMKQCRIKPSVVCYNALINGYCMVGRMDEARELLHEMEAKGLKPDVVTYSTI 441

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I   CK C    A E+   M  +G  PD +TY+SL+   C + +  DA ++  N++  G+
Sbjct: 442 ISAYCKNCDTHSAFELNQQMLEKGVLPDAITYSSLIRVLCGEKRLSDAHVLFKNMIKLGL 501

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL----------- 372
           +P+  TY +L+      G  ++   + D M +A   P V TY++LINGL           
Sbjct: 502 QPDEFTYTSLIDGHCKEGNVESALSLHDKMVKAGVLPDVVTYSVLINGLSKSARAMEAQQ 561

Query: 373 ---------------------------------------CKYGLVDRAINSFNQMVSKNC 393
                                                  C  GL++ A   +  M+ +N 
Sbjct: 562 LLFKLYHEDPIPANTKYDALMHCCRKAELKSVLALLKGFCMKGLMNEADKVYQSMLDRNW 621

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
             D   Y+ ++   C+ G + +AL     +     +P   +  +LI GL + G + +A  
Sbjct: 622 NLDGSVYSVLIHGHCRAGNVMKALSFHKQMLQGGFAPNSTSTISLIRGLFENGMVVEADQ 681

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +  Q++      D    + LI        V+  +D+L  + K G
Sbjct: 682 VIQQLLNYCSLADAEASKALIDLNLNEGNVDAVLDVLHGMAKDG 725


>gi|356532610|ref|XP_003534864.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Glycine max]
          Length = 642

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 220/413 (53%), Gaps = 13/413 (3%)

Query: 127 FCSRGKLTDASKLIDIMAR-------RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           F + GK     K +D+  R       +  +  F+  +N+I   ++     +A +    +V
Sbjct: 103 FKAYGKAHLPEKAVDLFHRMWGEFQCKQTVKSFNSVLNVI---VQEGLFNRALEFYNHVV 159

Query: 180 MSGGV---PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            S  +   P+ +T+N+++  +C+ G +  AI +  E+ +  C PD  TY+T++  +    
Sbjct: 160 ASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEE 219

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +  +A+    +   +G  P L+ + +LI  +CK+  + RA +++D+M ++GC P+ VTYN
Sbjct: 220 RIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYN 279

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +LV+  C +GK + AV ++N ++S    PN +T+ TL++    +G      ++L  +   
Sbjct: 280 ALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEAR 339

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            H    + Y+ LI+GLCK G  ++A+  + +MV K C P+ + Y+ ++  LC+EG L+EA
Sbjct: 340 GHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEA 399

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
              L  +      P   TY++L+ G  + G   KA++++ +M  N    +++ +  LI G
Sbjct: 400 RGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILING 459

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
            C+  +  EA+ + K++  RG K+   AY  +IHG C +  V+  +++   M+
Sbjct: 460 LCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQML 512



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 101/379 (26%), Positives = 193/379 (50%), Gaps = 3/379 (0%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVS---GCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           ++N ++  + + G    A+   + +  S      P+ +T+N +++ M   G   +AI  +
Sbjct: 134 SFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMCRLGLVDKAIEVF 193

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           ++   + C P   TY+ L+  +CK+  I  A+ +LD+M +EG  P++V +N L++  CK+
Sbjct: 194 REIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLVAFNVLISALCKK 253

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G    A  +++N+  +G  PN +TYN L+H L  +G  +    +L+ M      P   T+
Sbjct: 254 GDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTF 313

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
             LING    G           + ++  + +   Y++++  LCKEG  N+A++L   + G
Sbjct: 314 GTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVG 373

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
             C P  I Y+ LIDGL ++G +++A     +M   G  P+  T+ +L+ G+  A    +
Sbjct: 374 KGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHK 433

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+ + KE+           Y ++I+GLCK  K   A+ V + M+S   K D   +S+++ 
Sbjct: 434 AILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIH 493

Query: 546 KVADDGMTEEAYKLWQKLI 564
              +  + E+  KL+ +++
Sbjct: 494 GFCNANLVEQGLKLFNQML 512



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/470 (25%), Positives = 222/470 (47%), Gaps = 26/470 (5%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C  G +  A ++   +  RN  PD +    L+ GL + +RI++A  +L  M
Sbjct: 172 TFNLVIKAMCRLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEM 231

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G  P+ + +N+++  LCK+G +  A  L+D M + GC P+ +TYN ++  +   GK 
Sbjct: 232 QVEGTFPNLVAFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKL 291

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+      +   C P  +T+  LI     Q   +    VL  +   G   +   Y+SL
Sbjct: 292 EKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVLVSLEARGHRGNEYVYSSL 351

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+GK++ A+ +   ++ +G  PN+I Y+ L+  L   G  D     L  M    +
Sbjct: 352 ISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCREGKLDEARGFLSEMKNKGY 411

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  FTY+ L+ G  + G   +AI  + +M + NC  + V Y+ ++  LCK+G   EAL 
Sbjct: 412 LPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCYSILINGLCKDGKFMEALM 471

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG--ISPDDITHRTLIWG 476
           +   +        ++ Y+++I G      +E+ + L+ QM+  G  + PD IT+  L+  
Sbjct: 472 VWKQMLSRGIKLDVVAYSSMIHGFCNANLVEQGLKLFNQMLCQGPVVQPDVITYNILLNA 531

Query: 477 FCRADQVEEAVDLLKEIGKRG----------------------NKMRNSAYRLVIHGLCK 514
           FC    +  A+D+L  +  +G                         R     LV+  L K
Sbjct: 532 FCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNPPQDGREFLDELVVR-LVK 590

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY-KLWQKL 563
            ++   A +++E+M+     P  + ++ +V++V       +A  + W +L
Sbjct: 591 RQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKAISECWSRL 640



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/302 (30%), Positives = 151/302 (50%), Gaps = 9/302 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++   C +GKL  A  L++ M     +P+      LI G +   R    ++VL
Sbjct: 274 NEVTYNALVHGLCLKGKLEKAVSLLNQMVSNKCVPNDVTFGTLINGFVMQGRASDGTRVL 333

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +   G   +   Y+ ++ GLCK G+   A+ L  EM   GC P+ I Y+ ++  +   
Sbjct: 334 VSLEARGHRGNEYVYSSLISGLCKEGKFNQAMELWKEMVGKGCGPNTIVYSALIDGLCRE 393

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A GF  +   KG  P   TY+ L+    +     +AI V  +MA   C  + V Y
Sbjct: 394 GKLDEARGFLSEMKNKGYLPNSFTYSSLMRGYFEAGDSHKAILVWKEMANNNCIHNEVCY 453

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+N  CK GK+ +A++V   +LSRG++ + + Y++++H   +    + V++ L + N+
Sbjct: 454 SILINGLCKDGKFMEALMVWKQMLSRGIKLDVVAYSSMIHGFCNA---NLVEQGLKLFNQ 510

Query: 356 -----ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
                    P V TYNIL+N  C    + RAI+  N M+ + C PD +T +  L  L +E
Sbjct: 511 MLCQGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTL-RE 569

Query: 411 GM 412
            M
Sbjct: 570 NM 571



 Score = 95.1 bits (235), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 57/252 (22%), Positives = 130/252 (51%), Gaps = 4/252 (1%)

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +++ +L+ S  S   + +++++L  M           + ++     K  L ++A++ F++
Sbjct: 62  LSFYSLIESHASSLDFRSLEEVLHQMKRERRVFLEKNFIVMFKAYGKAHLPEKAVDLFHR 121

Query: 388 MVSK-NCQPDIVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCS--PCLITYNTLIDGLA 443
           M  +  C+  + ++N+VL  + +EG+ N AL+   H++   S +  P  +T+N +I  + 
Sbjct: 122 MWGEFQCKQTVKSFNSVLNVIVQEGLFNRALEFYNHVVASKSLNIHPNALTFNLVIKAMC 181

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           + G ++KA+ ++ ++     +PD+ T+ TL+ G C+ ++++EAV LL E+   G      
Sbjct: 182 RLGLVDKAIEVFREIPLRNCAPDNYTYSTLMHGLCKEERIDEAVSLLDEMQVEGTFPNLV 241

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           A+ ++I  LCK   +  A ++++ M      P++  ++ +V  +   G  E+A  L  ++
Sbjct: 242 AFNVLISALCKKGDLGRAAKLVDNMFLKGCVPNEVTYNALVHGLCLKGKLEKAVSLLNQM 301

Query: 564 IEWKVFEKGTTL 575
           +  K      T 
Sbjct: 302 VSNKCVPNDVTF 313



 Score = 46.2 bits (108), Expect = 0.047,   Method: Compositional matrix adjust.
 Identities = 32/121 (26%), Positives = 54/121 (44%), Gaps = 21/121 (17%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF---------------- 152
            GP V+ D  T N +L  FC +  +  A  +++IM  +   PDF                
Sbjct: 514 QGPVVQPDVITYNILLNAFCIQKSIFRAIDILNIMLDQGCDPDFITCDIFLKTLRENMNP 573

Query: 153 -----HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI 207
                 F   L+  L++  R   ASK++++M+    +P   T+ M+V  +CK   +R AI
Sbjct: 574 PQDGREFLDELVVRLVKRQRTIGASKIIEVMMHKFLLPKASTWAMVVQQVCKPKNVRKAI 633

Query: 208 A 208
           +
Sbjct: 634 S 634


>gi|297848938|ref|XP_002892350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338192|gb|EFH68609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 493

 Score =  207 bits (526), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 123/383 (32%), Positives = 204/383 (53%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  + + ++  FC   +L+ A   +  M +    P      +L+ G   ++RI++A 
Sbjct: 104 ISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAM 163

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  +V  G  P+ + YN ++  LC+  Q+ +A+ +L+ M   G  PDVITYN+++  +
Sbjct: 164 SLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRL 223

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F +GK+  +     D +R G  P +IT++ +I+   K+  +  A +  D+M      P+I
Sbjct: 224 FHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNI 283

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYNSL+N  C  G  D+A  V+N ++S+G  PN++TYNTL++        D   KIL +
Sbjct: 284 VTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCV 343

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+        FTYN L  G C+ G  + A     +MVS    PDI T+N +L  LC+ G 
Sbjct: 344 MSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGK 403

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +AL  L  L  S     +ITYN +I G+ K   +E A  L+  +   G+SPD IT+ T
Sbjct: 404 IEKALVKLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTT 463

Query: 473 LIWGFCRADQVEEAVDLLKEIGK 495
           ++ G  R     EA +L +++ K
Sbjct: 464 MMIGLRRKRLWLEAHELYRKMKK 486



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 224/435 (51%), Gaps = 6/435 (1%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTI 188
           K  DA  L   MA    +P     ++  R L+ I +++K   V+ +   + + G   D  
Sbjct: 53  KFNDALTLFCDMAESRPLPSI---VDFSRLLVAIAKLKKYEAVISLFRHIEILGISHDLY 109

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           +++ ++   C+  ++  A++ L +M   G EP ++T+ +++       + ++A+      
Sbjct: 110 SFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQEAMSLVDQI 169

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  G  P ++ Y  +I+ +C+   +  A++VL+ M   G  PD++TYNSL+      GK+
Sbjct: 170 VGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLITRLFHSGKW 229

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             +  ++++++  G+ P+ IT++ ++   G  G      K  D M + S  P + TYN L
Sbjct: 230 GVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVDPNIVTYNSL 289

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           INGLC +GL+D A    N MVSK   P+ VTYNT++   CK   +++A+++L +++    
Sbjct: 290 INGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKILCVMSHDGV 349

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
                TYNTL  G  + G    A  +  +M+  G+ PD  T   L+ G C   ++E+A+ 
Sbjct: 350 DGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVLPDIYTFNMLLDGLCEHGKIEKALV 409

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
            L+++ K    +    Y ++I G+CK+ KV+ A  +   +      PD   ++T++  + 
Sbjct: 410 KLEDLQKSETVVGIITYNIIIKGMCKANKVEDAWYLFCSLALKGVSPDVITYTTMMIGLR 469

Query: 549 DDGMTEEAYKLWQKL 563
              +  EA++L++K+
Sbjct: 470 RKRLWLEAHELYRKM 484



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/345 (23%), Positives = 167/345 (48%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y   LR+   + KF  A+  + D       P ++ ++ L+  + K       I +   + 
Sbjct: 41  YRERLRSGLHSIKFNDALTLFCDMAESRPLPSIVDFSRLLVAIAKLKKYEAVISLFRHIE 100

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
           I G S D+ ++++L++  C+  +   A+  +  ++  G EP+ +T+ +L++         
Sbjct: 101 ILGISHDLYSFSTLIDCFCRCSRLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRIQ 160

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               ++D +    + P V  YN +I+ LC+   VD A++  N M     +PD++TYN+++
Sbjct: 161 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCENRQVDTALDVLNHMEKMGIRPDVITYNSLI 220

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             L   G    + ++L  +      P +IT++ +ID   K+G + +A   Y +M++  + 
Sbjct: 221 TRLFHSGKWGVSARILSDMMRMGIHPDVITFSAMIDVFGKEGQLLEAKKQYDEMIQRSVD 280

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P+ +T+ +LI G C    ++EA  +L  +  +G       Y  +++G CKSK+VD A+++
Sbjct: 281 PNIVTYNSLINGLCIHGLLDEAKKVLNFMVSKGFFPNAVTYNTLVNGYCKSKRVDDAMKI 340

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           L +M       D   ++T+ +     G    A K+  +++   V 
Sbjct: 341 LCVMSHDGVDGDTFTYNTLYQGYCQAGQFNAAEKVLARMVSCGVL 385


>gi|449453087|ref|XP_004144290.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
 gi|449522905|ref|XP_004168466.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Cucumis sativus]
          Length = 915

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/437 (26%), Positives = 225/437 (51%), Gaps = 1/437 (0%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           SR  + D  K + +    + +    F +N ++ G  ++  + +A   +  +V +G   DT
Sbjct: 180 SRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDT 239

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            TY  ++ G C+   + +A A+   M   GC  + ++Y  ++    +  +  +A+  +  
Sbjct: 240 FTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQ 299

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
                C P + TYT++I  +C+      A+ +  +M  + C P++ TY  L+   C+   
Sbjct: 300 MHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSN 359

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           +DDA  ++N +L +G+ P+ +TYN L+     +G   +  +IL +M   + SP   TYN 
Sbjct: 360 FDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNE 419

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LI G C+   + +A++  ++M+ +  QP++VTYN ++   CKEG L  A +LL L+N S 
Sbjct: 420 LILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESG 479

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P   TY+  ID L K+G +E+A  L+  + E GI  +++ + TLI G+C+  +V +  
Sbjct: 480 LVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGR 539

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            LL ++   G    +  Y  +I G CK K    A  ++++MI    +P    ++ ++  +
Sbjct: 540 FLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNL 599

Query: 548 ADDGMTEEAYKLWQKLI 564
             D   ++A+ ++ +++
Sbjct: 600 LKDDEFDQAHDMFDQML 616



 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 127/451 (28%), Positives = 225/451 (49%), Gaps = 2/451 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDI-MARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           D  T   ++  +C R K  DA+  I + M  +  + +     NLI G     R+++A K+
Sbjct: 238 DTFTYTSLILGYC-RNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRVDEALKL 296

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              M      P   TY +++  LC+ G+   A+ +  EM+   C+P+V TY  ++ ++ +
Sbjct: 297 FSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVLICSLCE 356

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +  F  A       L KG  P ++TY  LI+  CK+   A A+E+L  M    CSP+  T
Sbjct: 357 DSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNCSPNART 416

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L+   C+      A+ +++ +L R ++PN +TYN L+H     G   +  K+L +MN
Sbjct: 417 YNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMN 476

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E+   P  +TY++ I+ LCK GLV+ A + F  +  K  + + V Y+T++   CK G ++
Sbjct: 477 ESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVS 536

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +   LL  +  + C P  ITYN+LIDG  K+   ++A +L   M++  I P   T+  LI
Sbjct: 537 DGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILI 596

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
               + D+ ++A D+  ++   G+      Y   IH  C   ++  A  ++  M +    
Sbjct: 597 DNLLKDDEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIM 656

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD  +++  +      G  + A+ + +++ E
Sbjct: 657 PDTMLYTLFIDAYGRFGSIDGAFGILKRMHE 687



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 211/445 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G + +A   +  + +     D     +LI G  R   ++ A+ +   M
Sbjct: 206 TLNTMVNGYCKLGNVVEAELYVSKIVQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSM 265

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G + + ++Y  ++ G C+  ++  A+ L  +M    C P V TY  I+  +   G+ 
Sbjct: 266 PNKGCLRNEVSYTNLIHGFCEARRVDEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRK 325

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  +K+   K C P + TYT+LI  +C+      A ++L+ M  +G  P +VTYN+L
Sbjct: 326 TEALNMFKEMTEKHCQPNVHTYTVLICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNAL 385

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+G    A+ +++ + S    PN+ TYN L+              +L  M E   
Sbjct: 386 IDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKMLERKL 445

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TYNILI+G CK G +  A    + M      PD  TY+  +  LCK G++ EA  
Sbjct: 446 QPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARS 505

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   L         + Y+TLIDG  K G +     L  +M+  G  P+ IT+ +LI G+C
Sbjct: 506 LFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYC 565

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +    +EA  L+  + KR  +     Y ++I  L K  + D A  + + M+S+   PD  
Sbjct: 566 KEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGSHPDVF 625

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
           +++  +      G  ++A  L  K+
Sbjct: 626 IYTAFIHAYCSHGRLKDAEVLICKM 650



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 127/492 (25%), Positives = 223/492 (45%), Gaps = 38/492 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C +G    A +++ +M   N  P+      LI G  R   I KA  +L  M
Sbjct: 381 TYNALIDGYCKKGLSASALEILSLMESNNCSPNARTYNELILGFCRGKNIHKAMSLLHKM 440

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +     P+ +TYN+++ G CK G + SA  LL  M+ SG  PD  TY+  + T+   G  
Sbjct: 441 LERKLQPNVVTYNILIHGQCKEGDLGSAYKLLSLMNESGLVPDEWTYSVFIDTLCKRGLV 500

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A   ++    KG     + Y+ LI+  CK   ++    +LD M   GC P+ +TYNSL
Sbjct: 501 EEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLLDKMLSAGCVPNSITYNSL 560

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+  + +A L+++ ++ R +EP + TY  L+ +L     +D    + D M     
Sbjct: 561 IDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKDDEFDQAHDMFDQMLSTGS 620

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P VF Y   I+  C +G +  A     +M +K   PD + Y   + A  + G ++ A  
Sbjct: 621 HPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLYTLFIDAYGRFGSIDGAFG 680

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLA-----------------------------KKGCME 449
           +L  ++   C P   TY+ LI  L+                             ++   E
Sbjct: 681 ILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLSSGVASNDFSNCWRRVDYE 740

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
             + L+G+M E+G +P+  T+   I G C+   +E A  L   + ++G       Y  ++
Sbjct: 741 FTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFDHMKEKGQSPNEDIYNSLL 800

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE---- 565
              C+      AI+ L++MI +R+ P       ++  + D+G  E+A +++   ++    
Sbjct: 801 GCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEGNDEKAKRVFCSFLQCEYN 860

Query: 566 -----WKVFEKG 572
                WKV   G
Sbjct: 861 YDEMVWKVLIDG 872



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 120/412 (29%), Positives = 199/412 (48%), Gaps = 1/412 (0%)

Query: 155 CINLIRGLI-RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
           C N++  L+ R   I++   V   M+     P+  T N MV G CK G +  A   + ++
Sbjct: 171 CYNMLLMLLSRFLMIDEMKSVYLEMLDDMVTPNIFTLNTMVNGYCKLGNVVEAELYVSKI 230

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
             +G   D  TY +++     N     A   +     KGC    ++YT LI   C+   +
Sbjct: 231 VQAGLSLDTFTYTSLILGYCRNKNVDAANAIFLSMPNKGCLRNEVSYTNLIHGFCEARRV 290

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A+++   M  + C P + TY  ++   C+ G+  +A+ +   +  +  +PN  TY  L
Sbjct: 291 DEALKLFSQMHEDNCWPTVRTYTVIIFALCQLGRKTEALNMFKEMTEKHCQPNVHTYTVL 350

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           + SL     +D   KIL+ M E    P+V TYN LI+G CK GL   A+   + M S NC
Sbjct: 351 ICSLCEDSNFDDAKKILNGMLEKGLIPSVVTYNALIDGYCKKGLSASALEILSLMESNNC 410

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P+  TYN ++   C+   +++A+ LLH +      P ++TYN LI G  K+G +  A  
Sbjct: 411 SPNARTYNELILGFCRGKNIHKAMSLLHKMLERKLQPNVVTYNILIHGQCKEGDLGSAYK 470

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L   M E+G+ PD+ T+   I   C+   VEEA  L + + ++G K     Y  +I G C
Sbjct: 471 LLSLMNESGLVPDEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYC 530

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K  KV     +L+ M+S+   P+   +++++     +   +EA  L   +I+
Sbjct: 531 KVGKVSDGRFLLDKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIK 582



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 108/433 (24%), Positives = 189/433 (43%), Gaps = 29/433 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T +  +   C RG + +A  L + +  +    +      LI G  ++ ++     +L
Sbjct: 483 DEWTYSVFIDTLCKRGLVEEARSLFESLKEKGIKANEVIYSTLIDGYCKVGKVSDGRFLL 542

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ +G VP++ITYN ++ G CK    + A  L+D M     EP   TY  ++  +  +
Sbjct: 543 DKMLSAGCVPNSITYNSLIDGYCKEKNFKEARLLVDIMIKRDIEPAADTYTILIDNLLKD 602

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +F QA   +   L  G  P +  YT  I   C    +  A  ++  M  +G  PD + Y
Sbjct: 603 DEFDQAHDMFDQMLSTGSHPDVFIYTAFIHAYCSHGRLKDAEVLICKMNAKGIMPDTMLY 662

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS---------------- 339
              ++   + G  D A  ++  +   G EP+  TY+ L+  L +                
Sbjct: 663 TLFIDAYGRFGSIDGAFGILKRMHEVGCEPSYYTYSCLIKHLSNAKPKEVSSSSELSDLS 722

Query: 340 --------RGCWDAVDK--ILDI---MNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
                     CW  VD    LD+   M E   +P   TY   I GLCK G ++ A   F+
Sbjct: 723 SGVASNDFSNCWRRVDYEFTLDLFGKMAEHGCAPNANTYGKFITGLCKVGCLEVAHRLFD 782

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M  K   P+   YN++LG  C+ G+  EA++ L ++  +   P L +   L+ GL  +G
Sbjct: 783 HMKEKGQSPNEDIYNSLLGCSCQLGLYGEAIRWLDIMIENRHLPHLDSCKLLLCGLYDEG 842

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
             EKA  ++   ++   + D++  + LI G  +    ++  DL   +  +G ++    Y 
Sbjct: 843 NDEKAKRVFCSFLQCEYNYDEMVWKVLIDGLLKKGLSDKCSDLFGIMETQGCQIHPKTYS 902

Query: 507 LVIHGLCKSKKVD 519
           ++I G    +++D
Sbjct: 903 MLIEGFDGIQEID 915


>gi|449444222|ref|XP_004139874.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492651|ref|XP_004159061.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 588

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 132/456 (28%), Positives = 229/456 (50%), Gaps = 10/456 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C+  ++ +    +  + RR  IPD      LI+GL    RI +A+K+ 
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM------SVSGCEPDVITYNTIL 229
             M   G  P+ +TY  ++ GLC  G I  A+    EM       V  C P+VI+Y+ I+
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G +++AI  + + + +G  P ++T+++LI+ +CK+  + +A ++L+ M   G  
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIV 304

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++ TY SL+   C  G  + A  +  ++ S+G EP+ I+YN L++        +   K+
Sbjct: 305 PNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKL 364

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            + M      P V T  +L+  L   G VD A   F  +       D+      L  LCK
Sbjct: 365 FNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCK 424

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G + EA++L + L   +    + T+  LIDGL K G +E A  L+ ++ E GI PD + 
Sbjct: 425 NGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMA 484

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + ++I GFC+  QV++A  L +++ + G       Y +++ G  +S K++  +Q+L  MI
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMI 544

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                PDD +++ +   V  D    E YK W  L++
Sbjct: 545 EKDVWPDDGIYAIVEDMVCKD----EKYKEWLDLLQ 576



 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 124/425 (29%), Positives = 218/425 (51%), Gaps = 6/425 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +++  C   ++ +A+KL   M +    P+      LI+GL  +  I  A K  
Sbjct: 160 DVVTFTTLIKGLCVEHRIIEATKLFMRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWH 219

Query: 176 QIMV------MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           Q M+      +    P+ I+Y++++ GLCK G    AI L +EM   G +P+V+T++ ++
Sbjct: 220 QEMLNDTSPYVFNCRPNVISYSIIIDGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLI 279

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G+  +A    +  ++ G  P L TYT LI+  C    +  A E+   M  +G  
Sbjct: 280 DMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYE 339

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD+++YN L+N  CK  K ++A+ + N +L  GM P+  T   LL +L   G  D   ++
Sbjct: 340 PDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKEL 399

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
             ++   +    +    I ++GLCK G +  A+  FN++ S N + DI T+  ++  LCK
Sbjct: 400 FRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCK 459

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G L  A +L   L      P  + Y+++I G  KKG ++KA +L+ +M ENG SPD IT
Sbjct: 460 AGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLIT 519

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  L+ GF  ++++E+ V LL  + ++     +  Y +V   +CK +K    + +L+   
Sbjct: 520 YSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFF 579

Query: 530 SSRYK 534
             +++
Sbjct: 580 VQKHR 584



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/485 (25%), Positives = 236/485 (48%), Gaps = 48/485 (9%)

Query: 128 CSRGKL--TDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
           C  G +  T A +  D+M R   I  F+    L+ GL +I+   +   + + M ++G  P
Sbjct: 70  CKTGSISVTQAHQFFDLMMR--SIFSFN---RLLAGLAKIEHYSQVFSLYKQMHLAGLWP 124

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D +T N+++  LC   +I   +A +  +   G  PDV+T+ T+++ +    +  +A   +
Sbjct: 125 DLLTLNILINCLCNVNRINEGLAAMAGIMRRGYIPDVVTFTTLIKGLCVEHRIIEATKLF 184

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAI----EVLDDMA--IEGCSPDIVTYNSLV 299
               + GC P ++TY  LI+ +C    I  A+    E+L+D +  +  C P++++Y+ ++
Sbjct: 185 MRMQKLGCTPNVVTYGTLIKGLCALGNINIALKWHQEMLNDTSPYVFNCRPNVISYSIII 244

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK G +++A+ + N ++ +G++PN +T++ L+  L   G      K+L++M +    
Sbjct: 245 DGLCKVGNWEEAICLFNEMVDQGVQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIV 304

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P +FTY  LI G C  G ++ A   F  M SK  +PD+++YN ++   CK   + EA++L
Sbjct: 305 PNLFTYTSLIKGFCLVGDLNSAKELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKL 364

Query: 420 LHLLNGSSCSPCLITYNTL-----------------------------------IDGLAK 444
            + +      P + T   L                                   +DGL K
Sbjct: 365 FNEMLHVGMWPDVKTSGVLLKALFLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCK 424

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G + +AM L+ ++    +  D  T   LI G C+A ++E A +L +++ + G +    A
Sbjct: 425 NGYIFEAMKLFNELESYNMKLDIETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMA 484

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +IHG CK  +VD A  + + M  +   PD   +S +++   +    E+  +L  ++I
Sbjct: 485 YSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMI 544

Query: 565 EWKVF 569
           E  V+
Sbjct: 545 EKDVW 549



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 82/309 (26%), Positives = 153/309 (49%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T + ++   C  G++  A KL+++M +   +P+     +LI+G   +  +  A 
Sbjct: 268 VQPNVVTFSVLIDMLCKEGQVIKAKKLLEMMIQIGIVPNLFTYTSLIKGFCLVGDLNSAK 327

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M   G  PD I+YNM++ G CK  ++  A+ L +EM   G  PDV T   +L+ +
Sbjct: 328 ELFVSMPSKGYEPDVISYNMLINGYCKTLKVEEAMKLFNEMLHVGMWPDVKTSGVLLKAL 387

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F  GK   A   ++       P  L    I ++ +CK   I  A+++ +++       DI
Sbjct: 388 FLAGKVDDAKELFRVIKPYAMPKDLCICCIFLDGLCKNGYIFEAMKLFNELESYNMKLDI 447

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+  L++  CK GK + A  +   L   G++P+++ Y++++H    +G  D  + +   
Sbjct: 448 ETFGCLIDGLCKAGKLETAWELFEKLYEEGIQPDAMAYSSMIHGFCKKGQVDKANILFQK 507

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E   SP + TY+IL+ G  +   +++ +   ++M+ K+  PD   Y  V   +CK+  
Sbjct: 508 MEENGCSPDLITYSILMRGFYESNKLEKVVQLLHRMIEKDVWPDDGIYAIVEDMVCKDEK 567

Query: 413 LNEALQLLH 421
             E L LL 
Sbjct: 568 YKEWLDLLQ 576



 Score = 40.0 bits (92), Expect = 3.0,   Method: Compositional matrix adjust.
 Identities = 24/103 (23%), Positives = 46/103 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    + ++  FC +G++  A+ L   M      PD      L+RG    +++EK  
Sbjct: 478 IQPDAMAYSSMIHGFCKKGQVDKANILFQKMEENGCSPDLITYSILMRGFYESNKLEKVV 537

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           ++L  M+     PD   Y ++   +CK  + +  + LL    V
Sbjct: 538 QLLHRMIEKDVWPDDGIYAIVEDMVCKDEKYKEWLDLLQRFFV 580


>gi|147768815|emb|CAN62672.1| hypothetical protein VITISV_031896 [Vitis vinifera]
          Length = 530

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 122/385 (31%), Positives = 194/385 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N ++ +FC   +L  A  ++  + +    PD      LIRGL    +I +A 
Sbjct: 143 IPPDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEAL 202

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +    +  G  PD +TY  ++ GLCK G   +AI LL  M    C P+VI YNTI+ ++
Sbjct: 203 HLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSL 262

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   + + + KG  P + TY  LI  +C  C       +L++M      P++
Sbjct: 263 CKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNV 322

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V ++++V+  CK+G    A  V++ ++ RG+EP+ +TY  L+     R   D   K+ D 
Sbjct: 323 VVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDT 382

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P V +YNILING C+   +D+A+    QM  +    D VTYNT++  LC  G 
Sbjct: 383 MVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGR 442

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L  A+ L H +  S   P L+TY  L+D L K   + +AMVL   +  + +  D + +  
Sbjct: 443 LQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNI 502

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
            I G CRA ++E A DL   +  +G
Sbjct: 503 AIDGMCRAGELEAARDLFSNLSCQG 527



 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 111/372 (29%), Positives = 196/372 (52%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD +    LI     + R+  A  VL  ++  G  PD  T+N ++ GLC  G+I  A+ L
Sbjct: 145 PDVYTLNILINSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHL 204

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
            D+    G +PDV+TY T++  +   G    AI   +  ++K C P +I Y  +I+ +CK
Sbjct: 205 FDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCK 264

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A  +  +M  +G SPDI TYNSL++  C   ++     ++N +++  + PN + 
Sbjct: 265 DRQVTEAFNLFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVV 324

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           ++T++ +L   G       ++D+M +    P V TY  L++G C    +D A+  F+ MV
Sbjct: 325 FSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMV 384

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            K C P++ +YN ++   C+   +++A+ LL  ++        +TYNTLI GL   G ++
Sbjct: 385 HKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQ 444

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A+ L+ +M+ +G  PD +T+R L+   C+   + EA+ LLK I           Y + I
Sbjct: 445 HAIALFHEMVASGQIPDLVTYRILLDYLCKNHHLAEAMVLLKAIEGSNLDADILVYNIAI 504

Query: 510 HGLCKSKKVDMA 521
            G+C++ +++ A
Sbjct: 505 DGMCRAGELEAA 516



 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 217/411 (52%), Gaps = 3/411 (0%)

Query: 156 INLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
           ++  + L  I +++  S VL +   M   G  PD  T N+++   C   ++  A ++L +
Sbjct: 113 VDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSVLAK 172

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           +   GC+PD  T+NT++R +   GK  +A+  +   + +G  P ++TY  L+  +CK   
Sbjct: 173 LLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGN 232

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
            + AI +L  M  + C P+++ YN++++  CK  +  +A  + + ++++G+ P+  TYN+
Sbjct: 233 TSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNS 292

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L+H+L +   W  V  +L+ M  +   P V  ++ +++ LCK G++  A +  + M+ + 
Sbjct: 293 LIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRG 352

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
            +PD+VTY  ++   C    ++EA+++   +    C P + +YN LI+G  +   M+KAM
Sbjct: 353 VEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAM 412

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  QM   G+  D +T+ TLI G C   +++ A+ L  E+   G       YR+++  L
Sbjct: 413 GLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYL 472

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           CK+  +  A+ +L+ +  S    D  V++  +  +   G  E A  L+  L
Sbjct: 473 CKNHHLAEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNL 523



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 107/351 (30%), Positives = 179/351 (50%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + D  T N +++  C  GK+ +A  L D        PD      L+ GL ++     A +
Sbjct: 179 QPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCKVGNTSAAIR 238

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ MV     P+ I YN ++  LCK  Q+  A  L  EM   G  PD+ TYN+++  + 
Sbjct: 239 LLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFTYNSLIHALC 298

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +  ++K       + +     P ++ ++ +++ +CK+  IA A +V+D M   G  PD+V
Sbjct: 299 NLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMIKRGVEPDVV 358

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +L++  C + + D+AV V + ++ +G  PN  +YN L++        D    +L+ M
Sbjct: 359 TYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMDKAMGLLEQM 418

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +         TYN LI+GLC  G +  AI  F++MV+    PD+VTY  +L  LCK   L
Sbjct: 419 SLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRILLDYLCKNHHL 478

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            EA+ LL  + GS+    ++ YN  IDG+ + G +E A  L+  +   G +
Sbjct: 479 AEAMVLLKAIEGSNLDADILVYNIAIDGMCRAGELEAARDLFSNLSCQGFA 529



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 193/380 (50%), Gaps = 2/380 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P T+ +  ++  + K     + ++L  +M   G  PDV T N ++ +     +   A   
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
               L+ GC P   T+  LI  +C +  I  A+ + D    EG  PD+VTY +L+N  CK
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVF 363
            G    A+ ++ +++ +   PN I YNT++ SL   R   +A +   +++ +   SP +F
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGI-SPDIF 288

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN LI+ LC            N+MV+    P++V ++TV+ ALCKEGM+  A  ++ ++
Sbjct: 289 TYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMM 348

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P ++TY  L+DG   +  M++A+ ++  M+  G  P+  ++  LI G+C+  ++
Sbjct: 349 IKRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRM 408

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           ++A+ LL+++  +G       Y  +IHGLC   ++  AI +   M++S   PD   +  +
Sbjct: 409 DKAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMVASGQIPDLVTYRIL 468

Query: 544 VKKVADDGMTEEAYKLWQKL 563
           +  +  +    EA  L + +
Sbjct: 469 LDYLCKNHHLAEAMVLLKAI 488



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 94/345 (27%), Positives = 174/345 (50%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P  + +  +L ++     +   +         G PP + T  ILI   C    +  A  V
Sbjct: 110 PSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNILINSFCHLRRLGYAFSV 169

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L  +   GC PD  T+N+L+   C +GK  +A+ + +  +  G +P+ +TY TL++ L  
Sbjct: 170 LAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGFQPDVVTYGTLMNGLCK 229

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G   A  ++L  M + +  P V  YN +I+ LCK   V  A N F++M++K   PDI T
Sbjct: 230 VGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFNLFSEMITKGISPDIFT 289

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           YN+++ ALC          LL+ +  S   P ++ ++T++D L K+G +  A  +   M+
Sbjct: 290 YNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALCKEGMIAIAHDVVDMMI 349

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           + G+ PD +T+  L+ G C   +++EAV +   +  +G      +Y ++I+G C+ +++D
Sbjct: 350 KRGVEPDVVTYTALMDGHCLRSEMDEAVKVFDTMVHKGCVPNVRSYNILINGYCQIQRMD 409

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            A+ +LE M       D   ++T++  +   G  + A  L+ +++
Sbjct: 410 KAMGLLEQMSLQGLIADTVTYNTLIHGLCHVGRLQHAIALFHEMV 454



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 80/260 (30%), Positives = 128/260 (49%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           DDA+   N +L     P+++ +  LL S+     +  V  +   M+     P V+T NIL
Sbjct: 94  DDALSSFNRMLHMHPPPSTVDFTKLLTSIAKMKHYSTVLSLSTQMDSFGIPPDVYTLNIL 153

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN  C    +  A +   +++   CQPD  T+NT++  LC EG + EAL L     G   
Sbjct: 154 INSFCHLRRLGYAFSVLAKLLKLGCQPDNTTFNTLIRGLCVEGKIGEALHLFDKTIGEGF 213

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P ++TY TL++GL K G    A+ L   M++    P+ I + T+I   C+  QV EA +
Sbjct: 214 QPDVVTYGTLMNGLCKVGNTSAAIRLLRSMVQKNCRPNVIAYNTIIDSLCKDRQVTEAFN 273

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L  E+  +G       Y  +IH LC   +      +L  M++S+  P+  VFST+V  + 
Sbjct: 274 LFSEMITKGISPDIFTYNSLIHALCNLCEWKHVTTLLNEMVNSKIMPNVVVFSTVVDALC 333

Query: 549 DDGMTEEAYKLWQKLIEWKV 568
            +GM   A+ +   +I+  V
Sbjct: 334 KEGMIAIAHDVVDMMIKRGV 353


>gi|326510773|dbj|BAJ91734.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 711

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 129/491 (26%), Positives = 234/491 (47%), Gaps = 38/491 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +L+  C   +   A  L+ +MA+   +  PD      +I G  +  +I KA  +   M+ 
Sbjct: 85  VLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIGKACNLYHEMMQ 144

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G VPD +T+N ++  LCK   + +A  LL +M  +G  P+ +TY +++      G++++
Sbjct: 145 QGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEE 204

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   +++   +G  P ++++   ++ +CK      A E+   MA +G  P+IVTY  L++
Sbjct: 205 ATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLH 264

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +G + D +   N +   G+  N + +  L+ +   RG  D    IL  M     SP
Sbjct: 265 GYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSP 324

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY-------------------- 400
            VFTY+ LI+ LC+ G +  A++ FNQM+    QP+ V Y                    
Sbjct: 325 DVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELV 384

Query: 401 ----------------NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
                           N+++ ++CKEG + +A  +  L+        +I +NTLIDG   
Sbjct: 385 YEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCL 444

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G M KA  +   M+  GI PD  T+ TL+ G+ ++ ++++ ++L +E+  +  K     
Sbjct: 445 VGEMGKAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVT 504

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y +++ GL ++ +   A ++L  MI          ++ I+K +  +  T+EA  ++QKL 
Sbjct: 505 YNIILDGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLC 564

Query: 565 EWKVFEKGTTL 575
              V    TTL
Sbjct: 565 TMNVKFNITTL 575



 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 117/460 (25%), Positives = 229/460 (49%), Gaps = 1/460 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T+N I+   C    + +A  L+  M      P+     ++I G   + R E+A+K+ 
Sbjct: 150 DVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMIHGYSTLGRWEEATKMF 209

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G +PD +++N  +  LCK G+ + A  +   M+  G  P+++TY  +L      
Sbjct: 210 REMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATE 269

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G F   + F+      G     + +TILI+   K+  +  A+ +L +M  +G SPD+ TY
Sbjct: 270 GCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTY 329

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMN 354
           ++L++  C+ G+  DAV   N ++  G++PN++ Y++L+    + G    A + + ++MN
Sbjct: 330 STLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMN 389

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P +  +N +++ +CK G V  A + F+ +     + DI+ +NT++   C  G + 
Sbjct: 390 NGIPRPNIAFFNSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMG 449

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A  +L  +  +   P   TYNTL++G  K G ++  + L+ +M +  I P  +T+  ++
Sbjct: 450 KAFSVLDAMISAGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIIL 509

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G  RA +   A  +L E+   G  +    Y +++ GLC++   D AI + + + +   K
Sbjct: 510 DGLFRAGRTVAAQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVK 569

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            + T  +T++  +      EEA  L+  + +  +    +T
Sbjct: 570 FNITTLNTMINSMYTVQRREEAKDLFSAISDSGLVPNAST 609



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 111/407 (27%), Positives = 202/407 (49%), Gaps = 4/407 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-ALLDEMSVS 216
           ++ G  R  R E        ++ +G   D    N ++  LC   +   A+  LL  M+  
Sbjct: 14  VMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKVLLRRMTEL 73

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIA 274
           GC PD  +Y  +L+ + D+ + +QA+   +   ++   C P ++TY  +I    K+  I 
Sbjct: 74  GCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHGFFKEGKIG 133

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
           +A  +  +M  +G  PD+VT+NS++N  CK    D+A L++  ++  G+ PN +TY +++
Sbjct: 134 KACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPNKVTYTSMI 193

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           H   + G W+   K+   M      P + ++N  ++ LCK+G    A   F  M +K  +
Sbjct: 194 HGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFYSMAAKGHR 253

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+IVTY  +L     EG   + +   + + G       + +  LID  AK+G M++AM++
Sbjct: 254 PNIVTYGILLHGYATEGCFADMMSFFNTMKGDGIVANCLVFTILIDAYAKRGMMDEAMLI 313

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             +M   G+SPD  T+ TLI   CR  ++ +AVD   ++   G +     Y  +I G C 
Sbjct: 314 LSEMQGQGLSPDVFTYSTLISALCRMGRLADAVDKFNQMIGTGVQPNTVVYHSLIQGFCT 373

Query: 515 SKKVDMAIQ-VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              +  A + V E+M +   +P+   F++IV  +  +G   +A+ ++
Sbjct: 374 HGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRVMDAHHIF 420



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 201/444 (45%), Gaps = 1/444 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  + + C  G+  +A+++   MA +   P+      L+ G                M  
Sbjct: 225 NSFMDSLCKHGRSKEAAEIFYSMAAKGHRPNIVTYGILLHGYATEGCFADMMSFFNTMKG 284

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G V + + + +++    KRG +  A+ +L EM   G  PDV TY+T++  +   G+   
Sbjct: 285 DGIVANCLVFTILIDAYAKRGMMDEAMLILSEMQGQGLSPDVFTYSTLISALCRMGRLAD 344

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS-PDIVTYNSLV 299
           A+  +   +  G  P  + Y  LI+  C    + +A E++ +M   G   P+I  +NS+V
Sbjct: 345 AVDKFNQMIGTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIV 404

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK+G+  DA  + + +   G   + I +NTL+      G       +LD M  A   
Sbjct: 405 HSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIG 464

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P  FTYN L+NG  K G +D  +N F +M  K  +P  VTYN +L  L + G    A ++
Sbjct: 465 PDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKM 524

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           LH + G   +  L TYN ++ GL +  C ++A+V++ ++    +  +  T  T+I     
Sbjct: 525 LHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYT 584

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             + EEA DL   I   G     S Y ++I  L K   V+ A  +   M  S   P   +
Sbjct: 585 VQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRL 644

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
            +  ++ + + G   +A     K+
Sbjct: 645 LNDTIRTLLEKGEIVKAGNYMSKV 668



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/319 (23%), Positives = 155/319 (48%), Gaps = 1/319 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRI 168
           G  V+ +    + ++Q FC+ G L  A +L+ ++M      P+  F  +++  + +  R+
Sbjct: 354 GTGVQPNTVVYHSLIQGFCTHGDLVKAKELVYEMMNNGIPRPNIAFFNSIVHSICKEGRV 413

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
             A  +  ++   G   D I +N ++ G C  G++  A ++LD M  +G  PD  TYNT+
Sbjct: 414 MDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMISAGIGPDTFTYNTL 473

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +   F +G+    +  +++   K   P  +TY I+++ + +      A ++L +M   G 
Sbjct: 474 VNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVAAQKMLHEMIGCGT 533

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +  + TYN ++   C+    D+A+++   L +  ++ N  T NT+++S+ +    +    
Sbjct: 534 TVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMINSMYTVQRREEAKD 593

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   ++++   P   TY I+I  L K G V+ A N F+ M    C P     N  +  L 
Sbjct: 594 LFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAPCSRLLNDTIRTLL 653

Query: 409 KEGMLNEALQLLHLLNGSS 427
           ++G + +A   +  ++G S
Sbjct: 654 EKGEIVKAGNYMSKVDGKS 672



 Score =  108 bits (269), Expect = 9e-21,   Method: Compositional matrix adjust.
 Identities = 78/300 (26%), Positives = 138/300 (46%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ + C  G++ DA  + D++    +  D      LI G   +  + KA  VL  M+ 
Sbjct: 401 NSIVHSICKEGRVMDAHHIFDLVKDIGERSDIIMFNTLIDGYCLVGEMGKAFSVLDAMIS 460

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PDT TYN +V G  K G+I   + L  EMS    +P  +TYN IL  +F  G+   
Sbjct: 461 AGIGPDTFTYNTLVNGYFKSGRIDDGLNLFREMSDKKIKPTTVTYNIILDGLFRAGRTVA 520

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     + +  G    L TY I+++ +C+      AI +   +       +I T N+++N
Sbjct: 521 AQKMLHEMIGCGTTVSLPTYNIILKGLCRNNCTDEAIVMFQKLCTMNVKFNITTLNTMIN 580

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                 + ++A  + + +   G+ PN+ TY  ++ +L   G  +  D +   M ++  +P
Sbjct: 581 SMYTVQRREEAKDLFSAISDSGLVPNASTYGIMIRNLLKEGSVEEADNMFSSMEKSGCAP 640

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
                N  I  L + G + +A N  +++  K+   +  T + +L     +G   E +QLL
Sbjct: 641 CSRLLNDTIRTLLEKGEIVKAGNYMSKVDGKSISLEASTSSLLLSLFSGKGNYREQIQLL 700



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 66/242 (27%), Positives = 111/242 (45%), Gaps = 38/242 (15%)

Query: 360 PTVFTYNILINGLCK----------YGLVDR--------AINS----------------- 384
           PT+FTY +++NG C+          +G + R        A N+                 
Sbjct: 6   PTIFTYGVVMNGCCRARRPELGLAFFGRLLRTGLKADKTAANTVLKCLCCTKRTDDAVKV 65

Query: 385 -FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS--CSPCLITYNTLIDG 441
              +M    C PD  +Y  VL  LC +    +AL LL ++      CSP ++TYNT+I G
Sbjct: 66  LLRRMTELGCVPDAFSYAIVLKRLCDDNRSQQALDLLRMMAKEEGVCSPDVVTYNTVIHG 125

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K+G + KA  LY +MM+ G  PD +TH ++I   C+A  V+ A  LL+++   G    
Sbjct: 126 FFKEGKIGKACNLYHEMMQQGFVPDVVTHNSIINALCKARAVDNAELLLRQMVDNGVPPN 185

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y  +IHG     + + A ++   M      PD   +++ +  +   G ++EA +++ 
Sbjct: 186 KVTYTSMIHGYSTLGRWEEATKMFREMTGRGLIPDIVSWNSFMDSLCKHGRSKEAAEIFY 245

Query: 562 KL 563
            +
Sbjct: 246 SM 247


>gi|238478688|ref|NP_174320.2| PPR repeat domain-containing protein [Arabidopsis thaliana]
 gi|332193082|gb|AEE31203.1| PPR repeat domain-containing protein [Arabidopsis thaliana]
          Length = 806

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 128/481 (26%), Positives = 242/481 (50%), Gaps = 39/481 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           ++++ ++   G+L DA K++ +M R    P+   C   I   +R +R+EKA + L+ M +
Sbjct: 246 SRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQV 305

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC---------------------- 218
            G VP+ +TYN M+ G C   ++  AI LL++M   GC                      
Sbjct: 306 VGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVE 365

Query: 219 --------------EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
                          PD +TYNT++  +  +    +A+ F KD   KG     + Y+ ++
Sbjct: 366 VRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIV 425

Query: 265 EQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
             +CK+  ++ A +++++M  +G C PD+VTY ++VN  C+ G+ D A  ++  + + G 
Sbjct: 426 HALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGH 485

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           +PN+++Y  LL+ +   G      +++++  E   SP   TY+++++GL + G +  A +
Sbjct: 486 KPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACD 545

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              +MV K   P  V  N +L +LC++G  +EA + +       C+  ++ + T+I G  
Sbjct: 546 VVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFC 605

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           +   ++ A+ +   M       D  T+ TL+    +  ++ EA +L+K++  +G      
Sbjct: 606 QNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPV 665

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            YR VIH  C+  KVD  + +LE MIS   +   T+++ +++K+   G  EEA  L  K+
Sbjct: 666 TYRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEADTLLGKV 723

Query: 564 I 564
           +
Sbjct: 724 L 724



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/446 (27%), Positives = 221/446 (49%), Gaps = 10/446 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++ +C   ++ +A +L++ M  +  +PD      ++  L +  RI +   +++ M
Sbjct: 314 TYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKM 373

Query: 179 VMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
               G VPD +TYN ++  L K      A+  L +    G   D + Y+ I+  +   G+
Sbjct: 374 AKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGR 433

Query: 238 FKQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
             +A     + L KG CPP ++TYT ++   C+   + +A ++L  M   G  P+ V+Y 
Sbjct: 434 MSEAKDLINEMLSKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYT 493

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L+N  C+ GK  +A  ++N        PNSITY+ ++H L   G       ++  M   
Sbjct: 494 ALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLK 553

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P     N+L+  LC+ G    A     + ++K C  ++V + TV+   C+   L+ A
Sbjct: 554 GFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAA 613

Query: 417 LQLL---HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           L +L   +L+N  +    + TY TL+D L KKG + +A  L  +M+  GI P  +T+RT+
Sbjct: 614 LSVLDDMYLINKHA---DVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTV 670

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I  +C+  +V++ V +L+++  R  K R + Y  VI  LC   K++ A  +L  ++ +  
Sbjct: 671 IHRYCQMGKVDDLVAILEKMISR-QKCR-TIYNQVIEKLCVLGKLEEADTLLGKVLRTAS 728

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKL 559
           + D      +++     G+   AYK+
Sbjct: 729 RSDAKTCYALMEGYLKKGVPLSAYKV 754



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 108/435 (24%), Positives = 207/435 (47%), Gaps = 45/435 (10%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           + +VL +M   G       ++ ++    + GQ+R A+ +L  M  +G EP+++  NT + 
Sbjct: 226 SRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTID 285

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                 + ++A+ F +     G  P ++TY  +I   C    +  AIE+L+DM  +GC P
Sbjct: 286 VFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLP 345

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-----GMEPNSITYNTLLHSL-----GSR 340
           D V+Y +++ + CK+ +    ++ + +L+ +     G+ P+ +TYNTL+H L        
Sbjct: 346 DKVSYYTIMGYLCKEKR----IVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADE 401

Query: 341 GCW-------------------------------DAVDKILDIMNEASHSPTVFTYNILI 369
             W                               +A D I +++++    P V TY  ++
Sbjct: 402 ALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMLSKGHCPPDVVTYTAVV 461

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           NG C+ G VD+A      M +   +P+ V+Y  +L  +C+ G   EA +++++      S
Sbjct: 462 NGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWS 521

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  ITY+ ++ GL ++G + +A  +  +M+  G  P  +    L+   CR  +  EA   
Sbjct: 522 PNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKF 581

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           ++E   +G  +    +  VIHG C++ ++D A+ VL+ M       D   ++T+V  +  
Sbjct: 582 MEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGK 641

Query: 550 DGMTEEAYKLWQKLI 564
            G   EA +L +K++
Sbjct: 642 KGRIAEATELMKKML 656



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 182/379 (48%), Gaps = 2/379 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D + Y  M+  L K    + +  +L  M   G       ++ ++ +    G+ + A+   
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
               R G  P L+     I+   +   + +A+  L+ M + G  P++VTYN ++   C  
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFT 364
            + ++A+ ++ ++ S+G  P+ ++Y T++  L   +   +  D +  +  E    P   T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-LL 423
           YN LI+ L K+   D A+        K  + D + Y+ ++ ALCKEG ++EA  L++ +L
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEML 445

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
           +   C P ++TY  +++G  + G ++KA  L   M  +G  P+ +++  L+ G CR  + 
Sbjct: 446 SKGHCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKS 505

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            EA +++    +      +  Y +++HGL +  K+  A  V+  M+   + P     + +
Sbjct: 506 LEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLL 565

Query: 544 VKKVADDGMTEEAYKLWQK 562
           ++ +  DG T EA K  ++
Sbjct: 566 LQSLCRDGRTHEARKFMEE 584



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 175/354 (49%), Gaps = 3/354 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  FC  G++  A KL+ +M      P+      L+ G+ R  +  +A +++
Sbjct: 453 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 512

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +       P++ITY++++ GL + G++  A  ++ EM + G  P  +  N +L+++  +
Sbjct: 513 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 572

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A  F ++ L KGC   ++ +T +I   C+   +  A+ VLDDM +     D+ TY
Sbjct: 573 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 632

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +LV+   K+G+  +A  ++  +L +G++P  +TY T++H     G  D +  IL+ M  
Sbjct: 633 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 692

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                T+  YN +I  LC  G ++ A     +++    + D  T   ++    K+G+   
Sbjct: 693 RQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLS 750

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-ISPDDI 468
           A ++   +   +  P +     L   L  KG +++A  L  +++E G ISP  +
Sbjct: 751 AYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQSL 804


>gi|359489321|ref|XP_002269223.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Vitis vinifera]
          Length = 889

 Score =  206 bits (525), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 218/432 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC  G + +A KL D +      P+      L+ G +++  I++A+ + + M
Sbjct: 338 TFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEM 397

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD IT+N++V G  K G+      LL ++SV G  PD   ++  +  +   G+ 
Sbjct: 398 RKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRL 457

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+ F  D L KG  P +I +  +I    +     +A E    M   G +P   T +SL
Sbjct: 458 DEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSL 517

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +      G+  +A  +I  ++ +G+  N++ +  LL     RG       +   M     
Sbjct: 518 LMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGI 577

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V  ++  I+GL K GLV+ A N F +M+ K   P+   YN+++   CK G LNEAL+
Sbjct: 578 FPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALK 637

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L  ++      P + T N +I GL K+G M  A+ ++  M + G+SPD IT+ TLI G+C
Sbjct: 638 LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYC 697

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A  +  A +L+  +   G+    + Y + IHG C S++++ A+ +L+ ++S+   P+  
Sbjct: 698 KAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTV 757

Query: 539 VFSTIVKKVADD 550
            +++++  V  D
Sbjct: 758 TYNSMLNGVCSD 769



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 206/423 (48%), Gaps = 3/423 (0%)

Query: 140 IDIMARRNQI---PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGG 196
           ++I+ R  ++   P       L + L+R+       K+ + ++  G  P   T++ ++ G
Sbjct: 216 LEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILG 275

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
            C++G I    +LL  M    CEP+   YN ++      G+   A+ ++   + +GC P 
Sbjct: 276 FCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPT 335

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           ++T+  +I   CK+  +  A ++ D +   G SP+ + YN+L+N   K  + D A ++  
Sbjct: 336 VVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYE 395

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +  +G+ P+ IT+N L+      G  +  D++L  ++     P    ++I ++GLC  G
Sbjct: 396 EMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAG 455

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +D A+     M+ K   P I+ +N+V+ A  + G+ ++A +   L+     +P   T +
Sbjct: 456 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 515

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           +L+ GL+  G +++A  L GQM+E G+S +++    L+  F +   V  A  L  E+ +R
Sbjct: 516 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 575

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G      A+   I GL K   V+ A  V   M+     P++  +++++      G   EA
Sbjct: 576 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 635

Query: 557 YKL 559
            KL
Sbjct: 636 LKL 638



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 195/433 (45%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G   +  KL   + RR   P  +    +I G  R   I     +L +M      P+   Y
Sbjct: 245 GDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAY 304

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N+++   C RG+   A+A  + M   GC P V+T+NT++      G   +A   +     
Sbjct: 305 NIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKE 364

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P  I Y  L+    K   I +A  + ++M  +G +PD +T+N LV+   K G+ +D
Sbjct: 365 MGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREED 424

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
              ++ ++   G+ P+   ++  +  L   G  D   + L  M E   SP++  +N +I 
Sbjct: 425 GDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIA 484

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
              + GL D+A  ++  MV     P   T +++L  L   G L EA +L+  +     S 
Sbjct: 485 AYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSV 544

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             + +  L+D   K+G +  A  L+G+M   GI PD +     I G  +   VEEA ++ 
Sbjct: 545 NNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVF 604

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+ ++G    N AY  +I G CK  K++ A+++ ++M      PD    + I+  +   
Sbjct: 605 LEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQ 664

Query: 551 GMTEEAYKLWQKL 563
           G    A  ++  +
Sbjct: 665 GRMRSAINVFMDM 677



 Score =  155 bits (392), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 85/292 (29%), Positives = 151/292 (51%)

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
           +A+E+L  M   G  P       L     + G Y +   +  +++ RG +P   T++ ++
Sbjct: 214 QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 273

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                +GC    + +L +M +    P  F YNI+IN  C  G    A+  FN M+ + C 
Sbjct: 274 LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 333

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P +VT+NTV+ A CKEG + EA +L   L     SP  I YNTL++G  K   +++A +L
Sbjct: 334 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 393

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y +M + GI+PD IT   L+ G  +  + E+   LLK+I   G     S + + + GLC 
Sbjct: 394 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 453

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           + ++D A++ L  M+     P    F++++   +  G+ ++A++ ++ ++ +
Sbjct: 454 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHF 505



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 180/355 (50%), Gaps = 5/355 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +   G    A +   +M      P    C +L+ GL    R+++A++++  M+ 
Sbjct: 480 NSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIE 539

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   + + + +++    KRG +  A +L  EM   G  PDV+ ++  +  +   G  ++
Sbjct: 540 KGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEE 599

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + LRKG  P    Y  LI   CK   +  A+++   M   G  PDI T N ++ 
Sbjct: 600 AYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIG 659

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV--DKILDIMNEASH 358
             CKQG+   A+ V  ++   G+ P+ ITYNTL++  G    +D V  D +++ M  +  
Sbjct: 660 GLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLIN--GYCKAFDMVNADNLVNRMYASGS 717

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P + TYNI I+G C    ++RA+   +++VS    P+ VTYN++L  +C + +L+ A+ 
Sbjct: 718 NPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSAGIVPNTVTYNSMLNGVCSD-ILDRAMI 776

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           L   L   +  P ++T N L+    K+G  E+ ++   ++ E   + D+IT++ +
Sbjct: 777 LTARLLKMAFVPNVVTANLLLSQFYKQGMPERTLMWGHKLSEIPYAFDEITYKIM 831



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 176/395 (44%), Gaps = 35/395 (8%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A+ +L  M   G  P       + + +   G +      +KD +R+G  P   T++ +I 
Sbjct: 215 ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 274

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             C++  I     +L  M    C P+   YN ++N  C +G+  DA+   N ++ RG  P
Sbjct: 275 GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 334

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
             +T+NT++++    G      K+ D + E   SP    YN L+NG  K   +D+A   +
Sbjct: 335 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 394

Query: 386 NQMVSKNCQPDIVTYN----------------------TVLG-------------ALCKE 410
            +M  K   PD +T+N                      +VLG              LC  
Sbjct: 395 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 454

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G L+EA++ L  +     SP +I +N++I   ++ G  +KA   Y  M+  G++P   T 
Sbjct: 455 GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTC 514

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +L+ G     +++EA +L+ ++ ++G  + N A+ +++    K   V  A  +   M  
Sbjct: 515 SSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER 574

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               PD   FS  +  ++  G+ EEAY ++ +++ 
Sbjct: 575 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLR 609



 Score = 51.6 bits (122), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 41/172 (23%), Positives = 67/172 (38%)

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
           + D    ++++ A     M  +AL++L  +      P       L   L + G       
Sbjct: 193 ESDFSVLDSLMRAFVNAEMGFQALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWK 252

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L+  ++  G  P   T   +I GFCR   +     LL  + K   +    AY +VI+  C
Sbjct: 253 LFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACC 312

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +   A+    LMI     P    F+T++     +G   EA KL+  L E
Sbjct: 313 IRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKE 364


>gi|449462479|ref|XP_004148968.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 580

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 130/423 (30%), Positives = 212/423 (50%), Gaps = 16/423 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C   ++++A++L   M +    PD      LI+GL     I  A K+ Q M
Sbjct: 141 TYNTLIKGLCMEHRISEATRLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEM 200

Query: 179 VMS------GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG----------CEPDV 222
           +           P+ ITYN++V GLCK G+   A  L +EM   G           +PD+
Sbjct: 201 LNDISRYEINCKPNVITYNIIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDM 260

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           +T+N ++ T+   GK  +A       +  G  P L+TY  LIE  C    +  A E+   
Sbjct: 261 VTFNVLIDTLCKEGKVIEAKKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVS 320

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  +GC PD+++YN L+N   K  K ++A+ + N +L  G  PN ITY++LL  +   G 
Sbjct: 321 MPSKGCEPDVISYNVLINGYSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGK 380

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            D   K+  +M     +   +TY I ++GLCK   +  A+  F ++ S N + +I   N 
Sbjct: 381 VDDAKKLFSVMKAHGIAENSYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNC 440

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LCK G L  A +L   L+     P ++TY  +I G  ++G ++KA VL  +M  NG
Sbjct: 441 LIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANG 500

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
            +PD IT+ TL+ GF  ++++EE V LL  + ++          +V+  L K +K    +
Sbjct: 501 CTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECL 560

Query: 523 QVL 525
            +L
Sbjct: 561 HLL 563



 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 123/454 (27%), Positives = 229/454 (50%), Gaps = 18/454 (3%)

Query: 128 CSRGKLT--DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
           C  G +T   A     +M R    P      +L+ GL +I    +   +   M +SG   
Sbjct: 43  CKTGNVTATHALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSS 102

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D  T N+++  LC   ++R   A    +   G  P+++TYNT+++ +    +  +A   +
Sbjct: 103 DRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLF 162

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAI----EVLDDMAIE--GCSPDIVTYNSLV 299
               + GC P ++TY  LI+ +C    I  A+    E+L+D++     C P+++TYN +V
Sbjct: 163 LRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIV 222

Query: 300 NFSCKQGKYDDAV----------LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           +  CK G+ D+A           ++ N +L +G++P+ +T+N L+ +L   G      K+
Sbjct: 223 DGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKL 282

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L +M E+   P + TYN LI G C  G ++ A   F  M SK C+PD+++YN ++    K
Sbjct: 283 LGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSK 342

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              + EA++L + +      P +ITY++L+ G+   G ++ A  L+  M  +GI+ +  T
Sbjct: 343 TLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYT 402

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +   + G C+ D + EA+ L  E+     K+       +I GLCK+ K++ A ++ E + 
Sbjct: 403 YGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLS 462

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +  ++P+   ++ ++     +G  ++A  L QK+
Sbjct: 463 NEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKM 496



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 137/467 (29%), Positives = 225/467 (48%), Gaps = 16/467 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  T N +L   C+  +L +       + RR   P+      LI+GL    RI +A+
Sbjct: 100 LSSDRCTLNILLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEAT 159

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM--SVS----GCEPDVITYN 226
           ++   M   G  PD +TY  ++ GLC  G I  A+ L  EM   +S     C+P+VITYN
Sbjct: 160 RLFLRMQKLGCTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYN 219

Query: 227 TILRTMFDNGKFKQAIGFWKDQ----------LRKGCPPYLITYTILIEQVCKQCGIARA 276
            I+  +   G+  +A   +++           L +G  P ++T+ +LI+ +CK+  +  A
Sbjct: 220 IIVDGLCKVGREDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEA 279

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            ++L  M   G  PD+VTYNSL+   C  G  + A  +  ++ S+G EP+ I+YN L++ 
Sbjct: 280 KKLLGVMIESGIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLING 339

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
                  +   K+ + M      P V TY+ L+ G+   G VD A   F+ M +     +
Sbjct: 340 YSKTLKVEEAMKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAEN 399

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             TY   L  LCK   L EA++L   L  S+    +   N LIDGL K G +E A  L+ 
Sbjct: 400 SYTYGIFLDGLCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFE 459

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           ++   G  P+ +T+  +I GFCR  QV++A  L++++   G       Y  ++ G  +S 
Sbjct: 460 KLSNEGHEPNVVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESN 519

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           K++  +Q+L  M      PD    S +V  ++ D   +E   L  + 
Sbjct: 520 KLEEVVQLLHRMAQKDVSPDAITCSIVVDMLSKDEKYQECLHLLPRF 566



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 218/427 (51%), Gaps = 16/427 (3%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+  L  ++R+ +       ++  G  P+ +TYN ++ GLC   +I  A  L   M   G
Sbjct: 110 LLNCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLG 169

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK------GCPPYLITYTILIEQVCKQC 271
           C PDV+TY T+++ +   G    A+   ++ L         C P +ITY I+++ +CK  
Sbjct: 170 CTPDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVG 229

Query: 272 GIARAIEVLDDMAIEG----------CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
               A ++ ++M  +G            PD+VT+N L++  CK+GK  +A  ++  ++  
Sbjct: 230 REDEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIES 289

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G+ P+ +TYN+L+      G  ++  ++   M      P V +YN+LING  K   V+ A
Sbjct: 290 GIVPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEA 349

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +  +N+M+    +P+++TY+++L  +   G +++A +L  ++     +    TY   +DG
Sbjct: 350 MKLYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYTYGIFLDG 409

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L K  C+ +AM L+ ++  +    +      LI G C+A ++E A +L +++   G++  
Sbjct: 410 LCKNDCLFEAMKLFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPN 469

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y ++IHG C+  +VD A  +++ M ++   PD   ++T+++   +    EE  +L  
Sbjct: 470 VVTYTIMIHGFCREGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLH 529

Query: 562 KLIEWKV 568
           ++ +  V
Sbjct: 530 RMAQKDV 536



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 171/351 (48%), Gaps = 16/351 (4%)

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            A+ F+   +R    P L ++  L+  + K    ++   + + M + G S D  T N L+
Sbjct: 52  HALHFFHLMMRSTPTPSLSSFNHLLSGLAKIKHYSQVFSLYNQMRLSGLSSDRCTLNILL 111

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  C   +  +       +L RG  PN +TYNTL+  L          ++   M +   +
Sbjct: 112 NCLCNVNRLREGFAAFAGILRRGYSPNIVTYNTLIKGLCMEHRISEATRLFLRMQKLGCT 171

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSK------NCQPDIVTYNTVLGALCKEGML 413
           P V TY  LI GLC  G ++ A+    +M++       NC+P+++TYN ++  LCK G  
Sbjct: 172 PDVVTYGTLIKGLCGTGNINIALKLHQEMLNDISRYEINCKPNVITYNIIVDGLCKVGRE 231

Query: 414 NEALQLLHLLNGSS----------CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +EA QL   +                P ++T+N LID L K+G + +A  L G M+E+GI
Sbjct: 232 DEAKQLFEEMKTQGMIPNEMLDQGLQPDMVTFNVLIDTLCKEGKVIEAKKLLGVMIESGI 291

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD +T+ +LI GFC    +  A +L   +  +G +    +Y ++I+G  K+ KV+ A++
Sbjct: 292 VPDLVTYNSLIEGFCMVGDLNSARELFVSMPSKGCEPDVISYNVLINGYSKTLKVEEAMK 351

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +   M+    +P+   + +++K +   G  ++A KL+  +    + E   T
Sbjct: 352 LYNEMLLVGKRPNVITYDSLLKGIFLAGKVDDAKKLFSVMKAHGIAENSYT 402



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/208 (25%), Positives = 99/208 (47%), Gaps = 6/208 (2%)

Query: 83  HVLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +V+  +  L+G+ +  K  D     S+  + G  +  +  T    L   C    L +A K
Sbjct: 364 NVITYDSLLKGIFLAGKVDDAKKLFSVMKAHG--IAENSYTYGIFLDGLCKNDCLFEAMK 421

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L   +   N   +      LI GL +  ++E A ++ + +   G  P+ +TY +M+ G C
Sbjct: 422 LFTELKSSNFKLEIENLNCLIDGLCKAGKLETAWELFEKLSNEGHEPNVVTYTIMIHGFC 481

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           + GQ+  A  L+ +M  +GC PD+ITYNT++R  +++ K ++ +       +K   P  I
Sbjct: 482 REGQVDKANVLIQKMEANGCTPDIITYNTLMRGFYESNKLEEVVQLLHRMAQKDVSPDAI 541

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIE 286
           T +I+++ + K       + +L    I+
Sbjct: 542 TCSIVVDMLSKDEKYQECLHLLPRFPIQ 569


>gi|5454208|gb|AAD43623.1|AC005698_22 T3P18.22 [Arabidopsis thaliana]
          Length = 425

 Score =  206 bits (524), Expect = 2e-50,   Method: Compositional matrix adjust.
 Identities = 116/386 (30%), Positives = 201/386 (52%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV  G  PD +TY ++V GLCKRG    A  LL++M     EP V+ YNTI+  +     
Sbjct: 7   MVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKH 66

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A+  +K+   KG  P ++TY+ LI  +C     + A  +L DM     +PD+ T+++
Sbjct: 67  MDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSA 126

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++   K+GK  +A  + + ++ R ++P+ +TY++L++        D   ++ + M    
Sbjct: 127 LIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKH 186

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TYN LI G CKY  V+  +  F +M  +    + VTYN ++  L + G  + A 
Sbjct: 187 CFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQ 246

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++   +      P ++TYNTL+DGL K G +EKAMV++  +  + + P   T+  +I G 
Sbjct: 247 EIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGM 306

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+A +VE+  DL   +  +G K    AY  +I G C+    + A  + + M      P+ 
Sbjct: 307 CKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNS 366

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
             ++T+++    DG  E + +L +++
Sbjct: 367 GCYNTLIRARLRDGDREASAELIKEM 392



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/422 (29%), Positives = 211/422 (50%), Gaps = 7/422 (1%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           LID M  +   PD      ++ GL +    + A  +L  M      P  + YN ++ GLC
Sbjct: 3   LIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLC 62

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K   +  A+ L  EM   G  P+V+TY++++  + + G++  A     D + +   P + 
Sbjct: 63  KYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVF 122

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T++ LI+   K+  +  A ++ D+M      P IVTY+SL+N  C   + D+A  +   +
Sbjct: 123 TFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFM 182

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV---FTYNILINGLCKY 375
           +S+   P+ +TYNTL+        +  V++ +++  E S    V    TYNILI GL + 
Sbjct: 183 VSKHCFPDVVTYNTLIKGFCK---YKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G  D A   F +MVS    P+I+TYNT+L  LCK G L +A+ +   L  S   P + TY
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           N +I+G+ K G +E    L+  +   G+ PD + + T+I GFCR    EEA  L KE+ +
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G    +  Y  +I    +    + + ++++ M S  +  D +    +V  +  DG  ++
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIG-LVTNMLHDGRLDK 418

Query: 556 AY 557
           ++
Sbjct: 419 SF 420



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 101/359 (28%), Positives = 195/359 (54%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           +AL+D M   GC+PD++TY  ++  +   G    A        +    P ++ Y  +I+ 
Sbjct: 1   MALIDRMVAKGCQPDLVTYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDG 60

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +CK   +  A+ +  +M  +G  P++VTY+SL++  C  G++ DA  ++++++ R + P+
Sbjct: 61  LCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPD 120

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
             T++ L+ +    G     +K+ D M + S  P++ TY+ LING C +  +D A   F 
Sbjct: 121 VFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFE 180

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            MVSK+C PD+VTYNT++   CK   + E +++   ++        +TYN LI GL + G
Sbjct: 181 FMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAG 240

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
             + A  ++ +M+ +G+ P+ +T+ TL+ G C+  ++E+A+ + + + +   +     Y 
Sbjct: 241 DCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYN 300

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++I G+CK+ KV+    +   +     KPD   ++T++      G  EEA  L++++ E
Sbjct: 301 IMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 107/375 (28%), Positives = 185/375 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C RG    A  L++ M +    P       +I GL +   ++ A  + + M
Sbjct: 18  TYGVVVNGLCKRGDTDLAFNLLNKMEQGKLEPGVLIYNTIIDGLCKYKHMDDALNLFKEM 77

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ +TY+ ++  LC  G+   A  LL +M      PDV T++ ++      GK 
Sbjct: 78  ETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIERKINPDVFTFSALIDAFVKEGKL 137

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   + + +++   P ++TY+ LI   C    +  A ++ + M  + C PD+VTYN+L
Sbjct: 138 VEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMFEFMVSKHCFPDVVTYNTL 197

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK  + ++ + V   +  RG+  N++TYN L+  L   G  D   +I   M     
Sbjct: 198 IKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQAGDCDMAQEIFKEMVSDGV 257

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TYN L++GLCK G +++A+  F  +     +P I TYN ++  +CK G + +   
Sbjct: 258 PPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTYNIMIEGMCKAGKVEDGWD 317

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   L+     P ++ YNT+I G  +KG  E+A  L+ +M E+G  P+   + TLI    
Sbjct: 318 LFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKEDGTLPNSGCYNTLIRARL 377

Query: 479 RADQVEEAVDLLKEI 493
           R    E + +L+KE+
Sbjct: 378 RDGDREASAELIKEM 392



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 101/349 (28%), Positives = 166/349 (47%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+   C    + DA  L   M  +   P+     +LI  L    R   AS++L  M+ 
Sbjct: 55  NTIIDGLCKYKHMDDALNLFKEMETKGIRPNVVTYSSLISCLCNYGRWSDASRLLSDMIE 114

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PD  T++ ++    K G++  A  L DEM     +P ++TY++++     + +  +
Sbjct: 115 RKINPDVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDE 174

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   ++  + K C P ++TY  LI+  CK   +   +EV  +M+  G   + VTYN L+ 
Sbjct: 175 AKQMFEFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQ 234

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              + G  D A  +   ++S G+ PN +TYNTLL  L   G  +    + + +  +   P
Sbjct: 235 GLFQAGDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEP 294

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           T++TYNI+I G+CK G V+   + F  +  K  +PD+V YNT++   C++G   EA  L 
Sbjct: 295 TIYTYNIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALF 354

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
             +      P    YNTLI    + G  E +  L  +M   G + D  T
Sbjct: 355 KEMKEDGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDAST 403



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 85/302 (28%), Positives = 146/302 (48%), Gaps = 1/302 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  F   GKL +A KL D M +R+  P      +LI G    DR+++A ++ 
Sbjct: 120 DVFTFSALIDAFVKEGKLVEAEKLYDEMVKRSIDPSIVTYSSLINGFCMHDRLDEAKQMF 179

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV     PD +TYN ++ G CK  ++   + +  EMS  G   + +TYN +++ +F  
Sbjct: 180 EFMVSKHCFPDVVTYNTLIKGFCKYKRVEEGMEVFREMSQRGLVGNTVTYNILIQGLFQA 239

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A   +K+ +  G PP ++TY  L++ +CK   + +A+ V + +      P I TY
Sbjct: 240 GDCDMAQEIFKEMVSDGVPPNIMTYNTLLDGLCKNGKLEKAMVVFEYLQRSKMEPTIYTY 299

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N ++   CK GK +D   +  NL  +G++P+ + YNT++     +G  +  D +   M E
Sbjct: 300 NIMIEGMCKAGKVEDGWDLFCNLSLKGVKPDVVAYNTMISGFCRKGSKEEADALFKEMKE 359

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    YN LI    + G  + +     +M S     D  T   V   L  +G L++
Sbjct: 360 DGTLPNSGCYNTLIRARLRDGDREASAELIKEMRSCGFAGDASTIGLVTNML-HDGRLDK 418

Query: 416 AL 417
           + 
Sbjct: 419 SF 420


>gi|222637127|gb|EEE67259.1| hypothetical protein OsJ_24425 [Oryza sativa Japonica Group]
          Length = 799

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 225/455 (49%), Gaps = 6/455 (1%)

Query: 112 FVENDEK---TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           F E  EK   + N +L+  C+ G++ DA +L D MA     PD      ++ G   +  +
Sbjct: 245 FQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSEL 301

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E A K+L  M   G   + + Y  ++  LC  GQ+  A+ ++++M + G   D   + T+
Sbjct: 302 ETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTV 361

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G    A  ++ +  ++G     +TYT LI  +C+   +  A  VL +M  +G 
Sbjct: 362 MSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL 421

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             D VTY  L++  CK GK  +A LV N ++ + + PN +TY  L   L  +G   A ++
Sbjct: 422 DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANE 481

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M        +FTYN LINGLCK G +++A+ +   M     +PD+ TY T++GALC
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           +   L+ A  LL  +      P ++TYN L++G    G +E    L   M+E  I P+  
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +L+  +C    ++   ++ K +  +      + Y ++I G CK++ +  A+     M
Sbjct: 602 TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM 661

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           I   ++   + ++ +++ +       EA +L++K+
Sbjct: 662 IEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 228/454 (50%), Gaps = 8/454 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  +C+  +L  A KL+  MA R    +     ++I  L    ++  A +V+
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MVM G V D   +  ++ G C++G + +A    DEM   G   D +TY  ++  +   
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K+A    ++   KG     +TYT+LI+  CK   +  A  V + M  +  +P++VTY
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L +  CKQG    A  +++ + S+G+E N  TYN+L++ L   G  +   + +  M+E
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A   P V+TY  +I  LC+   +DRA +   +M+ K  +P IVTYN ++   C  G +  
Sbjct: 524 AGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEG 583

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM----VLYGQMMENGISPDDITHR 471
             +LL  +   +  P   TYN+L+    K+ C+EK M     +Y  M+   + P++ T+ 
Sbjct: 584 GKRLLEWMLEKNIHPNTTTYNSLM----KQYCIEKNMKSTTEIYKGMLSQEVVPNENTYN 639

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            LI G C+A  ++EA+    E+ ++G ++  S+Y  +I  L K KK   A ++ E M   
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKE 699

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           R   +  V++  +    ++   E    L  +L+E
Sbjct: 700 RLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 202/389 (51%), Gaps = 3/389 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           +T +YN+++  LC  G+I+ A  L DEM+     PDV+TY  ++       + + AI   
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            +   +G     + YT +I  +C +  ++ A+ V++DM + G   D   + ++++  C++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G    A    + +  RG+  + +TY  L++ L   G     +++L  M +        TY
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
            +LI+G CK G +  A    N+MV K   P++VTY  +   LCK+G +  A +LLH +  
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
                 + TYN+LI+GL K G +E+AM     M E G+ PD  T+ T+I   C++ +++ 
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A  LL+E+  +G K     Y ++++G C S +V+   ++LE M+     P+ T +++++K
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608

Query: 546 KVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +   +   +   ++++ ++  +V     T
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENT 637



 Score = 92.0 bits (227), Expect = 8e-16,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 16/263 (6%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG   + D    N++L   CS+G                ++  F +  +LI GL +   
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGL---------------ELNIFTYN-SLINGLCKAGN 510

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +E+A + +  M  +G  PD  TY  ++G LC+  ++  A +LL EM   G +P ++TYN 
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++     +G+ +      +  L K   P   TY  L++Q C +  +    E+   M  + 
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             P+  TYN L+   CK     +A+   + ++ +G    + +YN L+  L  +  +    
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690

Query: 348 KILDIMNEASHSPTVFTYNILIN 370
           ++ + M +   +     YN  I+
Sbjct: 691 RLFEKMRKERLTAEPDVYNFYID 713



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 30/310 (9%)

Query: 272 GIARAIEVLDDMAIEGCSPD-------IVTYNSLVNFSCKQGKYDDAVLVINN--LLSR- 321
           G ARAI V    A+   SP        I TY +   FS     +D  +L + +  LL R 
Sbjct: 164 GAARAILV---RALRFPSPHRHFVEQFISTYKA---FSSDPVSFDLLLLCLPSAPLLLRL 217

Query: 322 ---GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G+ P+  + N +L       C   +D+ + +  E     T  +YNIL+  LC  G +
Sbjct: 218 RQYGISPSPESCNAVL-------CRLPLDEAVQLFQELPEKNTC-SYNILLKALCTAGRI 269

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A   F++M S    PD+VTY  ++   C    L  A++LL  +         + Y ++
Sbjct: 270 KDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV 326

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I  L  +G +  A+ +   M+ +G+  D     T++ GFCR   +  A +   E+ KRG 
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 Y  +I+GLC++ ++  A +VL+ M       D   ++ ++      G   EA+ 
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 559 LWQKLIEWKV 568
           +  K+++ +V
Sbjct: 447 VHNKMVQKRV 456


>gi|302776656|ref|XP_002971480.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
 gi|300160612|gb|EFJ27229.1| hypothetical protein SELMODRAFT_95907 [Selaginella moellendorffii]
          Length = 631

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 125/451 (27%), Positives = 209/451 (46%), Gaps = 34/451 (7%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C   + TDA  +   M       D + C  LI    R+  + +A ++L  M       D
Sbjct: 171 LCKMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARD 230

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY ++V   C+ GQ+    + ++     GC    + YN I++     G+  +A   ++
Sbjct: 231 AFTYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFE 290

Query: 247 DQLRKGCPPYLITYTILIE--------------QVCKQCGI------------------- 273
             + K   P + TY +LI               Q  +Q G+                   
Sbjct: 291 STMTKESVPDVFTYNLLIALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGR 350

Query: 274 -ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
            A+A+EV  +M   GC PD V YN L++   KQGK D+A+ ++ ++  +G+ P+  TYN 
Sbjct: 351 AAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNI 410

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           ++  L S G ++       +M    HSP V TYN L+NGL K    D A + F++M +  
Sbjct: 411 VIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANK 470

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C PD+ T+ T++  L K G + +AL+    L     +P    YN LI G  + G ++K  
Sbjct: 471 CMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGY 530

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L+  M+E    PD IT+  L+ GF R      A++LL+E+ + G+    + Y ++I  L
Sbjct: 531 ELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSL 590

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
             + +V+ A  + + MI+  + PD   +S +
Sbjct: 591 SMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 621



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/448 (26%), Positives = 202/448 (45%), Gaps = 8/448 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQ----IPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           N ++  +C  G   D  + +D+  R  Q     P+      L+  L ++ R   A  V Q
Sbjct: 129 NTLIAGYCKAG---DGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALAVFQ 185

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M+ +G   D    N ++   C+ G +R A  LL  M+   C  D  TY  ++      G
Sbjct: 186 EMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAHCRAG 245

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +  +   F +     GC    + Y  +I+   +   +A A ++ +    +   PD+ TYN
Sbjct: 246 QMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDVFTYN 305

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L+   CK  + ++A+ +       G+  +  TY+ L+ + G  G      ++   M +A
Sbjct: 306 LLIAL-CKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYNMQKA 364

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P    YN+LI+ L K G VD A+     M  K   PD  TYN V+  L   G   +A
Sbjct: 365 GCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKA 424

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
                ++     SP ++TYNTL++GL K    ++A  L+ +M  N   PD  T  TLI  
Sbjct: 425 YSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDT 484

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             +A ++E+A++    + K G+   +  Y  +I G C+S +VD   ++ + MI     PD
Sbjct: 485 LAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPD 544

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              ++ +V   +  G T  A +L Q+++
Sbjct: 545 SITYTILVLGFSRRGHTSMAMELLQEMV 572



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 122/499 (24%), Positives = 218/499 (43%), Gaps = 45/499 (9%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVL 175
           E T  + +Q F   G L  A  ++D M R N   PD       +  L  + R+E+A  + 
Sbjct: 53  EVTCTECIQAFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLF 112

Query: 176 QIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMF 233
             M  +    PD + YN ++ G CK G    A+ +   +   G C+P+ ++++T++  + 
Sbjct: 113 DDMRETCDCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLC 172

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              +   A+  +++ L  G    +     LI   C+   + +A  +L  M    C+ D  
Sbjct: 173 KMSRATDALAVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAF 232

Query: 294 TYNSLVNFSCKQG-----------------------------------KYDDAVLVINNL 318
           TY  LVN  C+ G                                   +  +A  +  + 
Sbjct: 233 TYGILVNAHCRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFEST 292

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV---FTYNILINGLCKY 375
           +++   P+  TYN L+    S+     +++ L +  EA     V   FTY+ L++   K 
Sbjct: 293 MTKESVPDVFTYNLLIALCKSK----QLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKA 348

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G   +A+  F  M    C PD V YN ++  L K+G ++EAL+LL  +N     P   TY
Sbjct: 349 GRAAKALEVFYNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTY 408

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           N +ID L+  G  EKA   +G M     SPD +T+ TL+ G  +  + +EA DL  E+  
Sbjct: 409 NIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQA 468

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
                  + +  +I  L K+ +++ A++    ++   + P+  +++ ++      G  ++
Sbjct: 469 NKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDK 528

Query: 556 AYKLWQKLIEWKVFEKGTT 574
            Y+L+Q +IE   F    T
Sbjct: 529 GYELFQDMIECSCFPDSIT 547



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 116/255 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N ++     +GK+ +A +L++ M R+  +PD      +I  L    R EKA    
Sbjct: 369 DTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFF 428

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M      PD +TYN ++ GL K  +   A  L DEM  + C PD+ T+ T++ T+   
Sbjct: 429 GMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKA 488

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ + A+      ++ G  P    Y  LI   C+   + +  E+  DM    C PD +TY
Sbjct: 489 GRMEDALEQSARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITY 548

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             LV    ++G    A+ ++  ++  G  P   TYN L+ SL   G  +    +   M  
Sbjct: 549 TILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIA 608

Query: 356 ASHSPTVFTYNILIN 370
              +P + TY+ L N
Sbjct: 609 KGFNPDMQTYSALPN 623



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 88/396 (22%), Positives = 162/396 (40%), Gaps = 74/396 (18%)

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCK---------------QCGIA----------- 274
           A+  +K  L+ G P    T T ++++VCK               Q G+            
Sbjct: 2   ALATYKHLLKAGLPVDAHTATAMVKEVCKLGRTELLAELLAELRQKGVGLSEVTCTECIQ 61

Query: 275 ---------RAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-GM 323
                     A+ +LDDM     C PD V + + +++ C+  + + A+ + +++      
Sbjct: 62  AFGRAGDLDAAMGMLDDMRRGNFCQPDTVAFTAAMHWLCEVRRVEQAMTLFDDMRETCDC 121

Query: 324 EPNSITYNTLLHSLGSRGCWD-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            P+ + YNTL+      G  D A+D    +  E S  P   +++ L+  LCK      A+
Sbjct: 122 APDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDAL 181

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT-------- 434
             F +M+    + D+   NT++   C+ GML +A +LLH +   +C+    T        
Sbjct: 182 AVFQEMLGAGLKADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHACARDAFTYGILVNAH 241

Query: 435 ---------------------------YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
                                      YN +I G  + G + +A  L+   M     PD 
Sbjct: 242 CRAGQMHEVASFMELARHDGCALSAVNYNFIIQGFIRCGRLAEATQLFESTMTKESVPDV 301

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
            T+  LI   C++ Q+EEA+ L +E  + G  +    Y  ++    K+ +   A++V   
Sbjct: 302 FTYNLLI-ALCKSKQLEEALTLFQEAEQGGVVLDVFTYSYLMDAFGKAGRAAKALEVFYN 360

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M  +   PD  V++ ++  +   G  +EA +L + +
Sbjct: 361 MQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 396



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 53/187 (28%), Positives = 85/187 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L       +  +A  L D M     +PD      LI  L +  R+E A +  
Sbjct: 439 DVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQS 498

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +V  G  P++  YN ++ G C+ GQ+     L  +M    C PD ITY  ++      
Sbjct: 499 ARLVKMGHAPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRR 558

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A+   ++ +R+G  P L TY +LI  +     +  A  +  +M  +G +PD+ TY
Sbjct: 559 GHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTY 618

Query: 296 NSLVNFS 302
           ++L N S
Sbjct: 619 SALPNLS 625


>gi|357130032|ref|XP_003566662.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 859

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 123/459 (26%), Positives = 243/459 (52%), Gaps = 3/459 (0%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           + +G     D  + N ++  F  +G+++ A  LI+ M ++   PD     +++  L +  
Sbjct: 254 AKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKAR 313

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
            ++KA  VL+ MV  G  PD +TY  ++ G    G  + +  +  +M+  G  P ++T+N
Sbjct: 314 AMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFN 373

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           + + ++  +G+ K A   ++    KG  P L++Y+IL+     +   A    +   MA +
Sbjct: 374 SFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADK 433

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDA 345
           G   +   +N L++   K+G  D+A+LV   +  +G+ P+ +TY+TL+ +    G   DA
Sbjct: 434 GIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADA 493

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC-QPDIVTYNTVL 404
           ++K   +++     P    Y+ LI+G C +G + +A    ++M+SK   +P+IV +++++
Sbjct: 494 MEKFSQMIS-IGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSII 552

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            +LC EG + +A  + +L+      P ++T+N+LIDG    G MEKA  +   M+  GI 
Sbjct: 553 HSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIE 612

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD +T+ TL+ G+C++ ++++ + L +E+  +  K     Y +V+ GL  + +   A ++
Sbjct: 613 PDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKM 672

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              MI S    D   +  ++K +  + +T+EA  L+ KL
Sbjct: 673 FHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKL 711



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 208/406 (51%), Gaps = 4/406 (0%)

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-ALLDEMSVSGCEPDV 222
           R  R +        ++ +G    TI  N  +  LC   +   A+  LL  MS  GC P+ 
Sbjct: 168 RARRPDLGPAFFARLLRAGLRTRTIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNA 227

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVL 280
           I+YNT+++++  + + ++A+   +   ++G  C P ++++  +I    KQ  +++A  ++
Sbjct: 228 ISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLI 287

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           ++M  +G  PD+VTYNS+V+  CK    D A LV+  ++ +G+EP+ +TY  ++H     
Sbjct: 288 NEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCS 347

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G W    K+   M      P + T+N  ++ LCK+G    A   F  M +K   PD+V+Y
Sbjct: 348 GHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSY 407

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           + +L     EG   +   L H +           +N LI   AK+G M++AM+++ +M  
Sbjct: 408 SILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQG 467

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G+ PD +T+ TLI  FCR  ++ +A++   ++   G +     Y  +IHG C    +  
Sbjct: 468 QGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVK 527

Query: 521 AIQVL-ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           A +++ E+M     +P+   FS+I+  + ++G   +A+ ++  +I 
Sbjct: 528 AKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHDVFNLVIH 573



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 226/453 (49%), Gaps = 3/453 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T   I+  +   G   +++K+   M  +  IP      + +  L +  R + A 
Sbjct: 330 VEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVTFNSFMSSLCKHGRSKDAE 389

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ Q M   G +PD ++Y++++ G    G+      L   M+  G   +   +N ++   
Sbjct: 390 EIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMADKGIVANCHCFNILISAH 449

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A+  + +   +G  P ++TY+ LI   C+   +A A+E    M   G  P+ 
Sbjct: 450 AKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLADAMEKFSQMISIGLEPNT 509

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGM-EPNSITYNTLLHSLGSRG-CWDAVDKIL 350
           V Y+SL++  C  G    A  +++ ++S+G+  PN + +++++HSL + G   DA D + 
Sbjct: 510 VVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDAHD-VF 568

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           +++      PT+ T+N LI+G C  G +++A    + MVS   +PD+VTYNT++   CK 
Sbjct: 569 NLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSGYCKS 628

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G +++ L L   +      P  +TY+ ++DGL   G    A  ++ +M+++G + D  T+
Sbjct: 629 GKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVDIDTY 688

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
           + L+ G CR D  +EA+ L  ++G    K   +    VI+ L K ++ + A  +   + +
Sbjct: 689 KILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFAAIST 748

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           S   P+ + +  ++  +  +G  EEA  ++  +
Sbjct: 749 SGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSM 781



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/462 (27%), Positives = 230/462 (49%), Gaps = 12/462 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQ----IPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           N  L+  C   K TD +  +D++  R      +P+      +I+ L    R ++A  ++Q
Sbjct: 195 NTFLKCLC-HAKRTDEA--VDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQ 251

Query: 177 IMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            M   GG   PD +++N ++ G  K+G++  A  L++EM   G EPDV+TYN+I+  +  
Sbjct: 252 RMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALCK 311

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
                +A    +  + KG  P  +TYT +I           + ++   M  +G  P IVT
Sbjct: 312 ARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIVT 371

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +NS ++  CK G+  DA  +   + ++G  P+ ++Y+ LLH   + G +  ++ +   M 
Sbjct: 372 FNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSMA 431

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +         +NILI+   K G++D A+  F +M  +  +PD+VTY+T++ A C+ G L 
Sbjct: 432 DKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRLA 491

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS-PDDITHRTL 473
           +A++    +      P  + Y++LI G    G + KA  L  +MM  GI  P+ +   ++
Sbjct: 492 DAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSI 551

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I   C   +V +A D+   +   G++     +  +I G C   K++ A  VL+ M+S   
Sbjct: 552 IHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGI 611

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +PD   ++T+V      G  ++   L+++++  KV  K TT+
Sbjct: 612 EPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKV--KPTTV 651



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/434 (26%), Positives = 198/434 (45%), Gaps = 1/434 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  + + C  G+  DA ++   M  +  +PD      L+ G     R    + +   M
Sbjct: 371 TFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSM 430

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G V +   +N+++    KRG +  A+ +  EM   G  PDV+TY+T++      G+ 
Sbjct: 431 ADKGIVANCHCFNILISAHAKRGMMDEAMLVFTEMQGQGVRPDVVTYSTLISAFCRMGRL 490

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS-PDIVTYNS 297
             A+  +   +  G  P  + Y  LI   C    + +A E++ +M  +G   P+IV ++S
Sbjct: 491 ADAMEKFSQMISIGLEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSS 550

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  C +G+  DA  V N ++  G  P  +T+N+L+      G  +    +LD M    
Sbjct: 551 IIHSLCNEGRVMDAHDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVG 610

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TYN L++G CK G +D  +  F +M+ K  +P  VTY+ VL  L   G  + A 
Sbjct: 611 IEPDVVTYNTLVSGYCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAK 670

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++ H +  S  +  + TY  L+ GL +    ++A+ L+ ++       D     T+I   
Sbjct: 671 KMFHEMIDSGTAVDIDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINAL 730

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +  + EEA DL   I   G     S Y ++IH L K   V+ A  +   M  S   P  
Sbjct: 731 YKVRRREEANDLFAAISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSS 790

Query: 538 TVFSTIVKKVADDG 551
            + + I++ +   G
Sbjct: 791 RLLNDIIRMLLQKG 804



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 82/335 (24%), Positives = 163/335 (48%), Gaps = 1/335 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           +E +    + ++  FC  G L  A +L+ ++M++    P+  F  ++I  L    R+  A
Sbjct: 505 LEPNTVVYHSLIHGFCMHGDLVKAKELVSEMMSKGIPRPNIVFFSSIIHSLCNEGRVMDA 564

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             V  +++  G  P  +T+N ++ G C  G++  A  +LD M   G EPDV+TYNT++  
Sbjct: 565 HDVFNLVIHIGDRPTIVTFNSLIDGYCLVGKMEKAFGVLDAMVSVGIEPDVVTYNTLVSG 624

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
              +GK    +  +++ L K   P  +TY+I+++ +      + A ++  +M   G + D
Sbjct: 625 YCKSGKIDDGLILFREMLHKKVKPTTVTYSIVLDGLFHAGRTSAAKKMFHEMIDSGTAVD 684

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           I TY  L+   C+    D+A+ + + L +   + +    NT++++L      +  + +  
Sbjct: 685 IDTYKILLKGLCRNDLTDEAITLFHKLGAMDCKFDITILNTVINALYKVRRREEANDLFA 744

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            ++ +   P V TY ++I+ L K G V+ A   F+ M    C P     N ++  L ++G
Sbjct: 745 AISTSGLVPNVSTYGVMIHNLLKEGSVEEADTMFSSMEKSGCAPSSRLLNDIIRMLLQKG 804

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            + +A   +  ++G+  S    T + L+   + KG
Sbjct: 805 DIVKAGYYMSKVDGTIISLEASTTSLLMSLFSSKG 839



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 83/362 (22%), Positives = 162/362 (44%), Gaps = 15/362 (4%)

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP-------PYLITYTILIEQVCKQC 271
           +P V     I R          A   + + LR+G P        +L       + V    
Sbjct: 71  DPQVAFVAAIARVRAGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSN 130

Query: 272 GIARAIEVLDDMAIEGCSPDIV-----TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           G A  + + + +  E   P +      TY  L++  C+  + D        LL  G+   
Sbjct: 131 GPALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTR 190

Query: 327 SITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           +I  NT L  L  ++   +AVD +L  M++    P   +YN +I  LC       A++  
Sbjct: 191 TIEANTFLKCLCHAKRTDEAVDVLLHRMSDLGCVPNAISYNTVIKSLCGDSRSQEALDMV 250

Query: 386 NQMVSKN--CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            +M  +   C PD+V++NTV+    K+G +++A  L++ +      P ++TYN+++D L 
Sbjct: 251 QRMAKEGGRCSPDVVSFNTVIHGFFKQGEVSKACNLINEMVQKGVEPDVVTYNSIVDALC 310

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K   M+KA ++  QM++ G+ PD +T+  +I G+  +   +E+  + +++  +G      
Sbjct: 311 KARAMDKAELVLRQMVDKGVEPDGLTYTAIIHGYSCSGHWKESAKMFRKMTSKGLIPGIV 370

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +   +  LCK  +   A ++ + M +  + PD   +S ++   A +G   +   L+  +
Sbjct: 371 TFNSFMSSLCKHGRSKDAEEIFQYMTTKGHMPDLVSYSILLHGYATEGRFADMNNLFHSM 430

Query: 564 IE 565
            +
Sbjct: 431 AD 432



 Score = 61.6 bits (148), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 60/302 (19%), Positives = 116/302 (38%), Gaps = 48/302 (15%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG----SRGCWDA 345
           P +    ++          DDA  + + LL +G   ++   N  L +L     S  C + 
Sbjct: 72  PQVAFVAAIARVRAGTFSTDDAHHLFDELLRQGTPVHNPALNGFLAALARAPDSVSCSNG 131

Query: 346 VDKILDIMNEASHSP--------TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              +L + N              +V TY IL++  C+    D     F +++    +   
Sbjct: 132 PALVLALFNRICREEAGPRVAPLSVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTRT 191

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +  NT L  LC     +EA+                                   VL  +
Sbjct: 192 IEANTFLKCLCHAKRTDEAVD----------------------------------VLLHR 217

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKS 515
           M + G  P+ I++ T+I   C   + +EA+D+++ + K G +      ++  VIHG  K 
Sbjct: 218 MSDLGCVPNAISYNTVIKSLCGDSRSQEALDMVQRMAKEGGRCSPDVVSFNTVIHGFFKQ 277

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            +V  A  ++  M+    +PD   +++IV  +      ++A  + +++++  V   G T 
Sbjct: 278 GEVSKACNLINEMVQKGVEPDVVTYNSIVDALCKARAMDKAELVLRQMVDKGVEPDGLTY 337

Query: 576 LA 577
            A
Sbjct: 338 TA 339


>gi|218199706|gb|EEC82133.1| hypothetical protein OsI_26175 [Oryza sativa Indica Group]
          Length = 799

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 224/455 (49%), Gaps = 6/455 (1%)

Query: 112 FVENDEKTN---NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           F E  EK     N +L+  C+ G++ DA +L D MA     PD      ++ G   +  +
Sbjct: 245 FQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSEL 301

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E A K+L  M   G   + + Y  ++  LC  GQ+  A+ ++++M + G   D   + T+
Sbjct: 302 ETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTV 361

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G    A  ++ +  ++G     +TYT LI  +C+   +  A  VL +M  +G 
Sbjct: 362 MSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL 421

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             D VTY  L++  CK GK  +A LV N ++ + + PN +TY  L   L  +G   A ++
Sbjct: 422 DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANE 481

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M        +FTYN LINGLCK G +++A+ +   M     +PD+ TY T++GALC
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           +   L+ A  LL  +      P ++TYN L++G    G +E    L   M+E  I P+  
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +L+  +C    ++   ++ K +  +      + Y ++I G CK++ +  A+     M
Sbjct: 602 TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM 661

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           I   ++   + ++ +++ +       EA +L++K+
Sbjct: 662 IEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/454 (28%), Positives = 228/454 (50%), Gaps = 8/454 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  +C+  +L  A KL+  MA R    +     ++I  L    ++  A +V+
Sbjct: 284 DVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVV 343

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MVM G V D   +  ++ G C++G + +A    DEM   G   D +TY  ++  +   
Sbjct: 344 EDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRA 403

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K+A    ++   KG     +TYT+LI+  CK   +  A  V + M  +  +P++VTY
Sbjct: 404 GELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTY 463

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L +  CKQG    A  +++ + S+G+E N  TYN+L++ L   G  +   + +  M+E
Sbjct: 464 TALSDGLCKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDE 523

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A   P V+TY  +I  LC+   +DRA +   +M+ K  +P IVTYN ++   C  G +  
Sbjct: 524 AGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEG 583

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM----VLYGQMMENGISPDDITHR 471
             +LL  +   +  P   TYN+L+    K+ C+EK M     +Y  M+   + P++ T+ 
Sbjct: 584 GKRLLEWMLEKNIHPNTTTYNSLM----KQYCIEKNMKSTTEIYKGMLSQEVVPNENTYN 639

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            LI G C+A  ++EA+    E+ ++G ++  S+Y  +I  L K KK   A ++ E M   
Sbjct: 640 ILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKD 699

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           R   +  V++  +    ++   E    L  +L+E
Sbjct: 700 RLTAEPDVYNFYIDLSFNEDNLESTLALCDELVE 733



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 202/389 (51%), Gaps = 3/389 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           +T +YN+++  LC  G+I+ A  L DEM+     PDV+TY  ++       + + AI   
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            +   +G     + YT +I  +C +  ++ A+ V++DM + G   D   + ++++  C++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G    A    + +  RG+  + +TY  L++ L   G     +++L  M +        TY
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
            +LI+G CK G +  A    N+MV K   P++VTY  +   LCK+G +  A +LLH +  
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
                 + TYN+LI+GL K G +E+AM     M E G+ PD  T+ T+I   C++ +++ 
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A  LL+E+  +G K     Y ++++G C S +V+   ++LE M+     P+ T +++++K
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608

Query: 546 KVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +   +   +   ++++ ++  +V     T
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENT 637



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 16/263 (6%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG   + D    N++L   CS+G                ++  F +  +LI GL +   
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGL---------------ELNIFTYN-SLINGLCKAGN 510

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +E+A + +  M  +G  PD  TY  ++G LC+  ++  A +LL EM   G +P ++TYN 
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++     +G+ +      +  L K   P   TY  L++Q C +  +    E+   M  + 
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             P+  TYN L+   CK     +A+   + ++ +G    + +YN L+  L  +  +    
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690

Query: 348 KILDIMNEASHSPTVFTYNILIN 370
           ++ + M +   +     YN  I+
Sbjct: 691 RLFEKMRKDRLTAEPDVYNFYID 713



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 30/310 (9%)

Query: 272 GIARAIEVLDDMAIEGCSPD-------IVTYNSLVNFSCKQGKYDDAVLVINN--LLSR- 321
           G ARAI V    A+   SP        I TY +   FS     +D  +L + +  LL R 
Sbjct: 164 GAARAILV---RALRFPSPHRHFVEQFISTYKA---FSSDPVSFDLLLLCLPSAPLLLRL 217

Query: 322 ---GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G+ P+  + N +L       C   +D+ + +  E     T  +YNIL+  LC  G +
Sbjct: 218 RQYGISPSPESCNAVL-------CRLPLDEAVQLFQELPEKNTC-SYNILLKALCTAGRI 269

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A   F++M S    PD+VTY  ++   C    L  A++LL  +         + Y ++
Sbjct: 270 KDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV 326

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I  L  +G +  A+ +   M+ +G+  D     T++ GFCR   +  A +   E+ KRG 
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 Y  +I+GLC++ ++  A +VL+ M       D   ++ ++      G   EA+ 
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 559 LWQKLIEWKV 568
           +  K+++ +V
Sbjct: 447 VHNKMVQKRV 456


>gi|224075357|ref|XP_002304600.1| predicted protein [Populus trichocarpa]
 gi|222842032|gb|EEE79579.1| predicted protein [Populus trichocarpa]
          Length = 641

 Score =  206 bits (524), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 237/439 (53%), Gaps = 12/439 (2%)

Query: 136 ASKLIDIMAR----RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV---PDTI 188
           A  L D MA     +  +  F+  +N+I   I+     +A +    ++ + GV   P+ +
Sbjct: 114 AVGLFDRMAYEFECKRTVKSFNSVLNVI---IQEGLFYRALEFYNHVIGAKGVNISPNVL 170

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T+N+++  +CK G +  A+ +  +M VS C+PDV TY T++  +    +  +A+    + 
Sbjct: 171 TFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEM 230

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
              GC P  +T+ +LI  +CK+  +AR  +++D+M ++GC+P+ VTYN+L++  C +GK 
Sbjct: 231 QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKL 290

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           + A+ +++ ++S    PN +TY T+++ L  +G      ++L +M E  +    + Y+ L
Sbjct: 291 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSAL 350

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I+GL K G    A+  F +M  K C+ + + Y+ V+  LC++G  +EAL++L  +  + C
Sbjct: 351 ISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRC 410

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P   TY++L+ G  + G   KA+ ++  M ++  + +++ +  LI G C+  +V+EA+ 
Sbjct: 411 KPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 470

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR--YKPDDTVFSTIVKK 546
           +  ++  +G K    AY  +I+GL  +  V+ A+Q+   M+      +PD   ++ ++  
Sbjct: 471 VWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNA 530

Query: 547 VADDGMTEEAYKLWQKLIE 565
           +        A  L   +++
Sbjct: 531 LCKQSSISRAIDLLNSMLD 549



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 226/469 (48%), Gaps = 24/469 (5%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C  G + DA ++   M      PD +    L+ GL + DRI++A  +L  M
Sbjct: 171 TFNLVIKTMCKVGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEM 230

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G  P  +T+N+++ GLCK+G +     L+D M + GC P+ +TYNT++  +   GK 
Sbjct: 231 QIDGCFPSPVTFNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKL 290

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++AI      +   C P ++TY  +I  + KQ        VL  M   G   +   Y++L
Sbjct: 291 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVLALMEERGYHVNEYVYSAL 350

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK  +A+ +   +  +  E N+I Y+ ++  L   G  D   ++L  M     
Sbjct: 351 ISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRDGKPDEALEVLSEMTNNRC 410

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  +TY+ L+ G  + G   +AI  +  M   N   + V Y+ ++  LCK+G + EA+ 
Sbjct: 411 KPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKEAMM 470

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM--ENGISPDDITHRTLIWG 476
           +   + G  C P ++ Y ++I+GL+  G +E A+ LY +M+  E    PD +T+  L+  
Sbjct: 471 VWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLCQEPDSQPDVVTYNILLNA 530

Query: 477 FCRADQVEEAVDLLKEIGKRGNK---------MRNSAYRL------------VIHGLCKS 515
            C+   +  A+DLL  +  RG           +R    +L            ++  L K 
Sbjct: 531 LCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFLRTLREKLDPPQDGREFLDGLVVRLLKR 590

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY-KLWQKL 563
           ++V  A +++E+M+     P  + ++ +V+ + +    + A  K W  L
Sbjct: 591 QRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLCNPKKVQAAIQKCWSIL 639



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 150/286 (52%), Gaps = 2/286 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++   C +GKL  A  L+D M     +P+      +I GL++  R    ++VL
Sbjct: 273 NEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGARVL 332

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M   G   +   Y+ ++ GL K G+ + A+ L  EM+V  CE + I Y+ ++  +  +
Sbjct: 333 ALMEERGYHVNEYVYSALISGLFKEGKSQEAMQLFKEMTVKECELNTIVYSAVIDGLCRD 392

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A+    +     C P   TY+ L++   +     +AIE+  DMA    + + V Y
Sbjct: 393 GKPDEALEVLSEMTNNRCKPNAYTYSSLMKGFFEAGNGHKAIEMWKDMAKHNFTQNEVCY 452

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM-- 353
           + L++  CK GK  +A++V   +L +G +P+ + Y ++++ L + G  +   ++ + M  
Sbjct: 453 SVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDALQLYNEMLC 512

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            E    P V TYNIL+N LCK   + RAI+  N M+ + C PD+VT
Sbjct: 513 QEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVT 558



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 129/243 (53%), Gaps = 4/243 (1%)

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           T+ +L+ +  + G + +++K+LD M           + ++     K  L ++A+  F++M
Sbjct: 62  TFYSLIDNYANLGDFKSLEKVLDRMRCEKRVVVEKCFVVIFKAYGKAHLPEKAVGLFDRM 121

Query: 389 VSK-NCQPDIVTYNTVLGALCKEGMLNEALQLL-HLL--NGSSCSPCLITYNTLIDGLAK 444
             +  C+  + ++N+VL  + +EG+   AL+   H++   G + SP ++T+N +I  + K
Sbjct: 122 AYEFECKRTVKSFNSVLNVIIQEGLFYRALEFYNHVIGAKGVNISPNVLTFNLVIKTMCK 181

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G ++ A+ ++  M  +   PD  T+ TL+ G C+AD+++EAV LL E+   G       
Sbjct: 182 VGLVDDAVQMFRDMPVSKCQPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT 241

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + ++I+GLCK   +    ++++ M      P++  ++T++  +   G  E+A  L  +++
Sbjct: 242 FNVLINGLCKKGDLARVAKLVDNMFLKGCAPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 301

Query: 565 EWK 567
             K
Sbjct: 302 SSK 304



 Score = 62.0 bits (149), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 53/190 (27%), Positives = 88/190 (46%), Gaps = 24/190 (12%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F +N E   + ++   C  GK+ +A  +   M  +   PD     ++I GL     +E A
Sbjct: 445 FTQN-EVCYSVLIHGLCKDGKVKEAMMVWAQMLGKGCKPDVVAYGSMINGLSNAGLVEDA 503

Query: 172 SKVLQIMVMS--GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            ++   M+       PD +TYN+++  LCK+  I  AI LL+ M   GC+PD++T    L
Sbjct: 504 LQLYNEMLCQEPDSQPDVVTYNILLNALCKQSSISRAIDLLNSMLDRGCDPDLVTCIIFL 563

Query: 230 RTM------------FDNG------KFKQAIGFWK---DQLRKGCPPYLITYTILIEQVC 268
           RT+            F +G      K ++ +G  K     L+K  PP   T+T ++E +C
Sbjct: 564 RTLREKLDPPQDGREFLDGLVVRLLKRQRVLGASKIVEVMLQKLLPPKPSTWTRVVEDLC 623

Query: 269 KQCGIARAIE 278
               +  AI+
Sbjct: 624 NPKKVQAAIQ 633


>gi|449455685|ref|XP_004145582.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 219/454 (48%), Gaps = 39/454 (8%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           K ++ +  R  +  F  CI   R L R  +I++A ++ + M   G  PD +TY +++  L
Sbjct: 251 KEMEDLGLRPNVYTFTICI---RVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C  GQ+ +A  L  +M  +G +PD + Y T+L    D G       FW      G  P +
Sbjct: 308 CNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +T+TIL++ +CK      A    D M  +G  P++ TYN+L+    + G+ +DA+ ++  
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGT 427

Query: 318 LLSRGMEPNSITYNTL-----------------------------------LHSLGSRGC 342
           + S G++P + TYN                                     L+SL   G 
Sbjct: 428 MESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                 + + + E   +P   TYN+++    K G VD A+N  ++M+   C+PD++  N+
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++ +L K G ++EA Q+   +     SP ++TYNTL+ GL K+G ++KA+ L+  M+E  
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
            SP+ I+  TL+  FC+ D+VE A+ +  ++     K     Y  VI+GL K  KV+ A 
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                +  S + PD     T++  +   G   +A
Sbjct: 668 WFFHQLKKSMH-PDHVTICTLLPGLVKCGQIGDA 700



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/487 (26%), Positives = 220/487 (45%), Gaps = 43/487 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C+ G+L +A +L   M      PD    I L+        ++   +  
Sbjct: 296 DLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFW 355

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G +PD +T+ ++V  LCK      A A  D M   G  P++ TYNT++  +   
Sbjct: 356 SQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRA 415

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-------- 287
           G+ + A+         G  P   TY I I+   K     +A+E  + M  +G        
Sbjct: 416 GRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVAC 475

Query: 288 ---------------------------CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
                                       +PD VTYN ++    K G+ D+AV +++ ++ 
Sbjct: 476 NASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIR 535

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G EP+ I  N+L+ SL   G  D   ++ D M +   SPTV TYN L++GL K G V +
Sbjct: 536 NGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQK 595

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           AI  F  M+ K C P+ +++NT+L   CK   +  AL++   +    C P ++TYNT+I 
Sbjct: 596 AIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIY 655

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV----DLLKEIGKR 496
           GL K+  +  A   + Q ++  + PD +T  TL+ G  +  Q+ +A+    D + ++  R
Sbjct: 656 GLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFR 714

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
            N+   S +  ++ G     ++D AI   E ++ +    +D+    +V+ +        A
Sbjct: 715 VNR---SFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYA 771

Query: 557 YKLWQKL 563
           Y+++ K 
Sbjct: 772 YQIFDKF 778



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 221/486 (45%), Gaps = 35/486 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T   I +    RG L   + +++ M +   + + +    LI  LI+     +A 
Sbjct: 153 IRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEAL 212

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V + MV  G  P   TY+ ++  L K+      + LL EM   G  P+V T+   +R +
Sbjct: 213 EVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVL 272

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL------------ 280
              GK  +A   ++    +GC P L+TYT+LI+ +C    +  A E+             
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332

Query: 281 -----------------------DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                    M  +G  PD+VT+  LV+  CK   +D+A    + 
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +  +G+ PN  TYNTL+  L   G  +   K+L  M      PT +TYNI I+   K G 
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFIDYFGKSGE 452

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
             +A+ +F +M +K   P+IV  N  L +L + G L EA  + + L  +  +P  +TYN 
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           ++   +K G +++A+ L  +M+ NG  PD I   +LI    +A +V+EA  +   +    
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y  ++ GL K  +V  AI++ E MI  +  P+   F+T++     +   E A 
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFNTLLDCFCKNDEVELAL 632

Query: 558 KLWQKL 563
           K++ K+
Sbjct: 633 KMFSKM 638



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 129/523 (24%), Positives = 238/523 (45%), Gaps = 38/523 (7%)

Query: 80  SESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKL 139
           SE  VL V   L+ +T   ++       S+ P V +  +T N +L+      K+ D + +
Sbjct: 88  SEDEVLGV---LKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAV 144

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK 199
            + M ++    D    + + + L     + + + VL  M  +G V +  +YN ++  L +
Sbjct: 145 FEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQ 204

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
            G    A+ +   M   G +P + TY+ ++  +      +  +   K+    G  P + T
Sbjct: 205 SGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYT 264

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           +TI I  + +   I  A E+   M  EGC PD+VTY  L++  C  G+ ++A  +   + 
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMK 324

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           + G +P+ + Y TLL      G  D   +    M    + P V T+ IL++ LCK    D
Sbjct: 325 ANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFD 384

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A  +F+ M  +   P++ TYNT++  L + G + +AL+LL  +      P   TYN  I
Sbjct: 385 EAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPTAYTYNIFI 444

Query: 440 D-----------------------------------GLAKKGCMEKAMVLYGQMMENGIS 464
           D                                    LA+ G + +A  ++  + ENG++
Sbjct: 445 DYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLA 504

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD +T+  ++  + +  QV+EAV+LL E+ + G +        +I  L K+ +VD A Q+
Sbjct: 505 PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQM 564

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
            + M   +  P    ++T++  +  +G  ++A +L++ +IE K
Sbjct: 565 FDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKK 607



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 130/512 (25%), Positives = 219/512 (42%), Gaps = 77/512 (15%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C      +A    D+M ++  +P+ H    LI GL+R  RIE A K+L  M   G  P 
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLGTMESVGVQPT 436

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TYN+ +    K G+   A+   ++M   G  P+++  N  L ++ + G+ ++A   + 
Sbjct: 437 AYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFN 496

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
                G  P  +TY ++++   K   +  A+ +L +M   GC PD++  NSL++   K G
Sbjct: 497 GLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAG 556

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           + D+A  + + +    + P  +TYNTLL  LG  G      ++ + M E   SP   ++N
Sbjct: 557 RVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNTISFN 616

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L++  CK   V+ A+  F++M   +C+PD++TYNTV+  L KE  +N A    H L   
Sbjct: 617 TLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-K 675

Query: 427 SCSPCLITYNTLIDGLAKKGC------------------------------------MEK 450
           S  P  +T  TL+ GL K G                                     M+K
Sbjct: 676 SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDK 735

Query: 451 AMVLYGQMMENGI------------------------------------SPDDITHRTLI 474
           A++   +++ NGI                                    SP   ++  LI
Sbjct: 736 AIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLI 795

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR--LVIHGLCKSKKVDMAIQVLELMISSR 532
                    E+A DL K++   G       +   L +HG  KS K+    ++ + MIS R
Sbjct: 796 GELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG--KSGKITELFELYKEMISRR 853

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            KPD   ++ ++  +A     ++A   +  L+
Sbjct: 854 CKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 220/491 (44%), Gaps = 46/491 (9%)

Query: 114  ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
            E D    N ++ +    G++ +A ++ D M      P       L+ GL +  R++KA +
Sbjct: 539  EPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIE 598

Query: 174  VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            + + M+     P+TI++N ++   CK  ++  A+ +  +M+V  C+PDV+TYNT++  + 
Sbjct: 599  LFESMIEKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658

Query: 234  DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV--CKQCG----IAR------------ 275
               K   A  F+  QL+K   P  +T   L+  +  C Q G    IAR            
Sbjct: 659  KENKVNHAFWFFH-QLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNR 717

Query: 276  ------------------AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                              AI   +++ + G   +      LV   CK  +   A  + + 
Sbjct: 718  SFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDK 777

Query: 318  LLSR-GMEPNSITYNTLLHSL----GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
               + G+ P   +YN L+  L     +   WD    +   M     +P  FT+N+L+   
Sbjct: 778  FTKKLGISPTLASYNCLIGELLEVHYTEKAWD----LFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 373  CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
             K G +      + +M+S+ C+PD +TYN V+ +L K   L++AL   + L  S   P  
Sbjct: 834  GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 433  ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
             TY  LIDGLAK G +E+AM L+ +M + G  P+      LI G+ +    E A  L K 
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 493  IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
            +   G +    +Y +++  LC + +VD A+     + S+   PD   ++ I+  +     
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 553  TEEAYKLWQKL 563
             EEA  L+ ++
Sbjct: 1014 MEEALALYNEM 1024



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 129/492 (26%), Positives = 217/492 (44%), Gaps = 40/492 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+    T N  +  F   G+   A +  + M  +  +P+   C   +  L  + R+ +A 
Sbjct: 433 VQPTAYTYNIFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAK 492

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI--------- 223
            +   +  +G  PD++TYNMM+    K GQ+  A+ LL EM  +GCEPDVI         
Sbjct: 493 TMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSL 552

Query: 224 --------------------------TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
                                     TYNT+L  +   G+ ++AI  ++  + K C P  
Sbjct: 553 YKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIEKKCSPNT 612

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           I++  L++  CK   +  A+++   M +  C PD++TYN+++    K+ K + A    + 
Sbjct: 613 ISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ 672

Query: 318 LLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
           L  + M P+ +T  TLL  L   G   DA+    D M +         +  L+ G     
Sbjct: 673 L-KKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEA 731

Query: 377 LVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS-SCSPCLIT 434
            +D+AI    ++V    C+ D      V   LCK      A Q+          SP L +
Sbjct: 732 EMDKAIIFAEELVLNGICREDSFLIPLV-RVLCKHKRELYAYQIFDKFTKKLGISPTLAS 790

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           YN LI  L +    EKA  L+  M   G +PD  T   L+    ++ ++ E  +L KE+ 
Sbjct: 791 YNCLIGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMI 850

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
            R  K     Y +VI  L KS  +D A+     ++SS ++P    +  ++  +A  G  E
Sbjct: 851 SRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLE 910

Query: 555 EAYKLWQKLIEW 566
           EA +L++++ ++
Sbjct: 911 EAMRLFEEMSDY 922



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 162/341 (47%), Gaps = 1/341 (0%)

Query: 154  FCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDE 212
            F I L+R L +  R   A ++        G+ P   +YN ++G L +      A  L  +
Sbjct: 754  FLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKD 813

Query: 213  MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
            M   GC PD  T+N +L     +GK  +    +K+ + + C P  ITY I+I  + K   
Sbjct: 814  MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNN 873

Query: 273  IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
            + +A++   D+      P   TY  L++   K G+ ++A+ +   +   G +PN   +N 
Sbjct: 874  LDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933

Query: 333  LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
            L++  G  G  +   ++   M      P + +Y IL++ LC  G VD A+  FN++ S  
Sbjct: 934  LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993

Query: 393  CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
              PD + YN ++  L K   + EAL L + +      P L TYN+L+  L   G +E+A 
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053

Query: 453  VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
             +Y ++   G+ PD  T+  LI G+  ++  E A  + K +
Sbjct: 1054 RMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 193/415 (46%), Gaps = 2/415 (0%)

Query: 131  GKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
            G++ DA  +  D M +     +  F  +L+ G +    ++KA    + +V++G   +   
Sbjct: 695  GQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSF 754

Query: 190  YNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
               +V  LCK  +   A  + D+ +   G  P + +YN ++  + +    ++A   +KD 
Sbjct: 755  LIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM 814

Query: 249  LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
               GC P   T+ +L+    K   I    E+  +M    C PD +TYN +++   K    
Sbjct: 815  KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874

Query: 309  DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            D A+    +L+S    P   TY  L+  L   G  +   ++ + M++    P    +NIL
Sbjct: 875  DKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL 934

Query: 369  INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
            ING  K G  + A   F +MV++  +PD+ +Y  ++  LC  G ++EAL   + L  +  
Sbjct: 935  INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994

Query: 429  SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
             P  I YN +I+GL K   ME+A+ LY +M   GI PD  T+ +L+     A  VE+A  
Sbjct: 995  DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054

Query: 489  LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            + +E+   G +     Y  +I G   S+  + A  V + M+     P+   ++ +
Sbjct: 1055 MYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  141 bits (355), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 217/482 (45%), Gaps = 40/482 (8%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N +L  FC   ++  A K+   M   +  PD      +I GLI+ +++  A      +  
Sbjct: 616  NTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK 675

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALL-----------------DEMSVSGCEPDVI 223
            S   PD +T   ++ GL K GQI  AI++                  D M  +  E ++ 
Sbjct: 676  SMH-PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMD 734

Query: 224  TYNTILRTMFDNG----------------KFKQAIGFWK--DQLRK--GCPPYLITYTIL 263
                    +  NG                K K+ +  ++  D+  K  G  P L +Y  L
Sbjct: 735  KAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCL 794

Query: 264  IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
            I ++ +     +A ++  DM   GC+PD  T+N L+    K GK  +   +   ++SR  
Sbjct: 795  IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRC 854

Query: 324  EPNSITYNTLLHSLGSRGCWD-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +P++ITYN ++ SL      D A+D   D+++ +   PT  TY  LI+GL K G ++ A+
Sbjct: 855  KPDAITYNIVISSLAKSNNLDKALDFFYDLVS-SDFRPTPRTYGPLIDGLAKVGRLEEAM 913

Query: 383  NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
              F +M    C+P+   +N ++    K G    A QL   +      P L +Y  L+D L
Sbjct: 914  RLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCL 973

Query: 443  AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
               G +++A+  + ++   G+ PD I +  +I G  ++ ++EEA+ L  E+  RG     
Sbjct: 974  CLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDL 1033

Query: 503  SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
              Y  ++  L  +  V+ A ++ E +  +  +PD   ++ +++  +     E AY +++ 
Sbjct: 1034 YTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKN 1093

Query: 563  LI 564
            ++
Sbjct: 1094 MM 1095



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 140/285 (49%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T N +L      GK+T+  +L   M  R   PD      +I  L + + ++KA    
Sbjct: 822  DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              +V S   P   TY  ++ GL K G++  A+ L +EMS  GC+P+   +N ++      
Sbjct: 882  YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            G  + A   +K  + +G  P L +YTIL++ +C    +  A+   +++   G  PD + Y
Sbjct: 942  GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            N ++N   K  + ++A+ + N + +RG+ P+  TYN+L+ +LG  G  +   ++ + +  
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
            A   P VFTYN LI G       + A   +  M+   C P+I TY
Sbjct: 1062 AGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 104/216 (48%)

Query: 118  KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
            +T   ++      G+L +A +L + M+     P+      LI G  +I   E A ++ + 
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 178  MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            MV  G  PD  +Y ++V  LC  G++  A+   +E+  +G +PD I YN I+  +  + +
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 238  FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             ++A+  + +   +G  P L TY  L+  +     + +A  + +++ + G  PD+ TYN+
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073

Query: 298  LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            L+         + A  V  N++  G  PN  TY  L
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 83/182 (45%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++  +   G    A +L   M      PD      L+  L    R+++A      +  
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            +G  PD I YN ++ GL K  ++  A+AL +EM   G  PD+ TYN+++  +   G  +Q
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A   +++    G  P + TY  LI           A  V  +M ++GC+P+I TY  L N
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111

Query: 301  FS 302
             S
Sbjct: 1112 QS 1113



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 74/154 (48%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            +  D K+   ++   C  G++ +A    + +      PDF     +I GL +  R+E+A 
Sbjct: 959  IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             +   M   G VPD  TYN ++  L   G +  A  + +E+ ++G EPDV TYN ++R  
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
              +   + A   +K+ +  GC P + TY  L  Q
Sbjct: 1079 SLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQ 1112


>gi|357499659|ref|XP_003620118.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
 gi|355495133|gb|AES76336.1| Pentatricopeptide repeat protein-like protein [Medicago truncatula]
          Length = 841

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 117/415 (28%), Positives = 217/415 (52%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD       I+G     +I +A      ++  G   D ++Y  ++ GLCK G+ ++A+ L
Sbjct: 261 PDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALEL 320

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L        +PDV+ YNTI+  M  +     A   + +++ K   P + TY  LI   C 
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  AI++ + M  +   PD+ T++ LV+  CK G   +A  V+  ++ + ++P+ +T
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y++L+         +  + I + M+    +  V +YNI+ING CK  +VD A+  F +M 
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            K   PD++TY++++  LCK G ++ AL+L+  ++     P +ITYN+++D L KK  ++
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KA+ L  ++   GI PD  T+  L+ G C++ ++E+A  + +++  +G  +   AY ++I
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 620

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            G C     D A+ +L  M  +   PD   +  I+  + +    + A KL +++I
Sbjct: 621 QGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMI 675



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 110/385 (28%), Positives = 204/385 (52%)

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PDTIT    + G C +GQI  A+   D++   G   D ++Y T++  +   G+ K 
Sbjct: 257 NGYEPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKA 316

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +    K   P ++ Y  +I+ +CK   +  A ++  +   +   PD+ TYN+L++
Sbjct: 317 ALELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALIS 376

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  GK  DA+ + N + S+ + P+  T++ L+      G       +L +M + S  P
Sbjct: 377 GFCIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKP 436

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY+ L++G C    V++A + FN M  +    ++ +YN ++   CK  M++EA++L 
Sbjct: 437 DVVTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLF 496

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++     P +ITY++LIDGL K G +  A+ L  +M   G  PD IT+ +++   C+ 
Sbjct: 497 KEMHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKK 556

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             V++A+ LL ++  +G +   + Y +++ GLC+S K++ A +V E ++   Y  D   +
Sbjct: 557 HHVDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAY 616

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           + +++   D G+ +EA  L  K+ E
Sbjct: 617 TVMIQGFCDKGLFDEALALLSKMEE 641



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 130/437 (29%), Positives = 214/437 (48%), Gaps = 5/437 (1%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           E D  T    ++ FC +G++  A    D ++A    +    +   LI GL ++   + A 
Sbjct: 260 EPDTITLTTFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYG-TLINGLCKVGETKAAL 318

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L+        PD + YN ++ G+CK   +  A  L  E       PDV TYN ++   
Sbjct: 319 ELLRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGF 378

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK K AI  +     K   P + T++IL++  CK   I  A  VL  M  +   PD+
Sbjct: 379 CIVGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDV 438

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY+SL++  C   + + A  + N +  RG+  N  +YN +++        D   K+   
Sbjct: 439 VTYSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKE 498

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+     P V TY+ LI+GLCK G +  A+   ++M  +  QPDI+TYN++L ALCK+  
Sbjct: 499 MHHKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHH 558

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +++A+ LL  L G    P + TY  L+ GL + G +E A  ++  ++  G + D   +  
Sbjct: 559 VDKAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTV 618

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I GFC     +EA+ LL ++ + G       Y ++I  L +  + DMA ++L  MI   
Sbjct: 619 MIQGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRG 678

Query: 533 Y---KPDDTVFSTIVKK 546
                 DD V S +V++
Sbjct: 679 LLVALTDDLVASILVRR 695



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 97/359 (27%), Positives = 173/359 (48%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L  +DG  V+ D    N I+   C    + DA  L      +   PD      LI G   
Sbjct: 321 LRRNDGKLVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIFPDVFTYNALISGFCI 380

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           + +++ A  +   M     +PD  T++++V G CK G I+ A  +L  M     +PDV+T
Sbjct: 381 VGKLKDAIDLFNKMTSKNIIPDVYTFSILVDGFCKDGNIKEAKNVLAMMMKQSIKPDVVT 440

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y++++       +  +A   +     +G    + +Y I+I   CK   +  A+++  +M 
Sbjct: 441 YSSLMDGYCLVNEVNKAESIFNTMSHRGVTANVQSYNIMINGFCKIKMVDEAMKLFKEMH 500

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +   PD++TY+SL++  CK G+   A+ +++ +  RG +P+ ITYN++L +L  +   D
Sbjct: 501 HKQIFPDVITYSSLIDGLCKSGRISYALELVDEMHYRGQQPDIITYNSILDALCKKHHVD 560

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +L  +      P + TY IL+ GLC+ G ++ A   F  ++ K    D+  Y  ++
Sbjct: 561 KAITLLTKLKGQGIRPDMNTYTILVKGLCQSGKLEDARKVFEDLLVKGYNLDVYAYTVMI 620

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
              C +G+ +EAL LL  +  + C P   TY  +I  L +K   + A  L  +M+  G+
Sbjct: 621 QGFCDKGLFDEALALLSKMEENGCIPDAKTYEIIILSLFEKDENDMAEKLLREMIMRGL 679



 Score = 73.2 bits (178), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 66/278 (23%), Positives = 120/278 (43%), Gaps = 21/278 (7%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           +DAV +   LL +   P  I +  +L SL     +  V  +   M            NIL
Sbjct: 92  NDAVSLFYRLLRQNPTPPDIEFGKILGSLVKSKHYHTVLSLSQKMEFKGIKLNFLNCNIL 151

Query: 369 INGLCKYGLVDRAINSFNQMVS-----KNC--QPDIVTYNTVLGALC-----KEGMLNEA 416
           IN  C+ GL+  A +   + V      K+C  + ++  +  +   +      K   L + 
Sbjct: 152 INSFCQLGLIPFAFSVLTRGVYWIEILKDCFDRKNLEDFKRLCWIVLILWDFKRLFLKDF 211

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY-----GQMMENGISPDDITHR 471
           LQ   L N       LI Y+       K+ C+ K+  +       ++++NG  PD IT  
Sbjct: 212 LQS-RLFNVLHSFKILIEYH---KTFIKQKCLLKSFEISIEYTPPKILKNGYEPDTITLT 267

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           T I GFC   Q+ +A+    ++   G  +   +Y  +I+GLCK  +   A+++L      
Sbjct: 268 TFIKGFCLKGQIHQALHFHDKVIAMGFHLDQVSYGTLINGLCKVGETKAALELLRRNDGK 327

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             +PD  +++TI+  +  D    +A+ L+ + +  ++F
Sbjct: 328 LVQPDVVMYNTIIDGMCKDKHVNDAFDLYSEKVSKRIF 365


>gi|115472343|ref|NP_001059770.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|27818007|dbj|BAC55770.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|50509504|dbj|BAD31185.1| putative CRP1 protein [Oryza sativa Japonica Group]
 gi|113611306|dbj|BAF21684.1| Os07g0513200 [Oryza sativa Japonica Group]
 gi|215715304|dbj|BAG95055.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 754

 Score =  206 bits (523), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 126/455 (27%), Positives = 224/455 (49%), Gaps = 6/455 (1%)

Query: 112 FVENDEKTN---NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           F E  EK     N +L+  C+ G++ DA +L D MA     PD      ++ G   +  +
Sbjct: 245 FQELPEKNTCSYNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSEL 301

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E A K+L  M   G   + + Y  ++  LC  GQ+  A+ ++++M + G   D   + T+
Sbjct: 302 ETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTV 361

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G    A  ++ +  ++G     +TYT LI  +C+   +  A  VL +M  +G 
Sbjct: 362 MSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGL 421

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             D VTY  L++  CK GK  +A LV N ++ + + PN +TY  L   L  +G   A ++
Sbjct: 422 DVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANE 481

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M        +FTYN LINGLCK G +++A+ +   M     +PD+ TY T++GALC
Sbjct: 482 LLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALC 541

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           +   L+ A  LL  +      P ++TYN L++G    G +E    L   M+E  I P+  
Sbjct: 542 QSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTT 601

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +L+  +C    ++   ++ K +  +      + Y ++I G CK++ +  A+     M
Sbjct: 602 TYNSLMKQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHCKARNMKEALYFHSEM 661

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           I   ++   + ++ +++ +       EA +L++K+
Sbjct: 662 IEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKM 696



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/447 (28%), Positives = 226/447 (50%), Gaps = 8/447 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C+  +L  A KL+  MA R    +     ++I  L    ++  A +V++ MVM G
Sbjct: 291 MVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHG 350

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V D   +  ++ G C++G + +A    DEM   G   D +TY  ++  +   G+ K+A 
Sbjct: 351 VVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAE 410

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++   KG     +TYT+LI+  CK   +  A  V + M  +  +P++VTY +L +  
Sbjct: 411 RVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGL 470

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CKQG    A  +++ + S+G+E N  TYN+L++ L   G  +   + +  M+EA   P V
Sbjct: 471 CKQGDVCAANELLHEMCSKGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDV 530

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TY  +I  LC+   +DRA +   +M+ K  +P IVTYN ++   C  G +    +LL  
Sbjct: 531 YTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEW 590

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAM----VLYGQMMENGISPDDITHRTLIWGFC 478
           +   +  P   TYN+L+    K+ C+EK M     +Y  M+   + P++ T+  LI G C
Sbjct: 591 MLEKNIHPNTTTYNSLM----KQYCIEKNMKSTTEIYKGMLSQEVVPNENTYNILIKGHC 646

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A  ++EA+    E+ ++G ++  S+Y  +I  L K KK   A ++ E M   R   +  
Sbjct: 647 KARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEARRLFEKMRKERLTAEPD 706

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
           V++  +    ++   E    L  +L+E
Sbjct: 707 VYNFYIDLSFNEDNLESTLALCDELVE 733



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 107/389 (27%), Positives = 202/389 (51%), Gaps = 3/389 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           +T +YN+++  LC  G+I+ A  L DEM+     PDV+TY  ++       + + AI   
Sbjct: 252 NTCSYNILLKALCTAGRIKDAHQLFDEMA---SPPDVVTYGIMVHGYCTLSELETAIKLL 308

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            +   +G     + YT +I  +C +  ++ A+ V++DM + G   D   + ++++  C++
Sbjct: 309 SEMAARGLELNPVAYTSVIALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRK 368

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G    A    + +  RG+  + +TY  L++ L   G     +++L  M +        TY
Sbjct: 369 GDLAAARNWFDEMQKRGLAADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTY 428

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
            +LI+G CK G +  A    N+MV K   P++VTY  +   LCK+G +  A +LLH +  
Sbjct: 429 TVLIDGYCKVGKMTEAFLVHNKMVQKRVTPNVVTYTALSDGLCKQGDVCAANELLHEMCS 488

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
                 + TYN+LI+GL K G +E+AM     M E G+ PD  T+ T+I   C++ +++ 
Sbjct: 489 KGLELNIFTYNSLINGLCKAGNLEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDR 548

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A  LL+E+  +G K     Y ++++G C S +V+   ++LE M+     P+ T +++++K
Sbjct: 549 AHSLLQEMLDKGIKPTIVTYNVLMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMK 608

Query: 546 KVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +   +   +   ++++ ++  +V     T
Sbjct: 609 QYCIEKNMKSTTEIYKGMLSQEVVPNENT 637



 Score = 91.7 bits (226), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 63/263 (23%), Positives = 117/263 (44%), Gaps = 16/263 (6%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG   + D    N++L   CS+G                ++  F +  +LI GL +   
Sbjct: 467 SDGLCKQGDVCAANELLHEMCSKGL---------------ELNIFTYN-SLINGLCKAGN 510

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +E+A + +  M  +G  PD  TY  ++G LC+  ++  A +LL EM   G +P ++TYN 
Sbjct: 511 LEQAMRTMIDMDEAGLKPDVYTYTTIIGALCQSKELDRAHSLLQEMLDKGIKPTIVTYNV 570

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++     +G+ +      +  L K   P   TY  L++Q C +  +    E+   M  + 
Sbjct: 571 LMNGFCMSGRVEGGKRLLEWMLEKNIHPNTTTYNSLMKQYCIEKNMKSTTEIYKGMLSQE 630

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             P+  TYN L+   CK     +A+   + ++ +G    + +YN L+  L  +  +    
Sbjct: 631 VVPNENTYNILIKGHCKARNMKEALYFHSEMIEKGFRLTASSYNALIRLLNKKKKFTEAR 690

Query: 348 KILDIMNEASHSPTVFTYNILIN 370
           ++ + M +   +     YN  I+
Sbjct: 691 RLFEKMRKERLTAEPDVYNFYID 713



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 81/310 (26%), Positives = 139/310 (44%), Gaps = 30/310 (9%)

Query: 272 GIARAIEVLDDMAIEGCSPD-------IVTYNSLVNFSCKQGKYDDAVLVINN--LLSR- 321
           G ARAI V    A+   SP        I TY +   FS     +D  +L + +  LL R 
Sbjct: 164 GAARAILV---RALRFPSPHRHFVEQFISTYKA---FSSDPVSFDLLLLCLPSAPLLLRL 217

Query: 322 ---GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G+ P+  + N +L       C   +D+ + +  E     T  +YNIL+  LC  G +
Sbjct: 218 RQYGISPSPESCNAVL-------CRLPLDEAVQLFQELPEKNTC-SYNILLKALCTAGRI 269

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A   F++M S    PD+VTY  ++   C    L  A++LL  +         + Y ++
Sbjct: 270 KDAHQLFDEMASP---PDVVTYGIMVHGYCTLSELETAIKLLSEMAARGLELNPVAYTSV 326

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I  L  +G +  A+ +   M+ +G+  D     T++ GFCR   +  A +   E+ KRG 
Sbjct: 327 IALLCDEGQVSDAVRVVEDMVMHGVVLDAAVFTTVMSGFCRKGDLAAARNWFDEMQKRGL 386

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 Y  +I+GLC++ ++  A +VL+ M       D   ++ ++      G   EA+ 
Sbjct: 387 AADGVTYTALINGLCRAGELKEAERVLQEMEDKGLDVDAVTYTVLIDGYCKVGKMTEAFL 446

Query: 559 LWQKLIEWKV 568
           +  K+++ +V
Sbjct: 447 VHNKMVQKRV 456


>gi|357145546|ref|XP_003573680.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 739

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 218/447 (48%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T   ++  +C  G L  + + +  + R    PD H   + + G  R   +  A ++  +
Sbjct: 73  RTYTTLINAYCLAGDLPASKRHLSSLLRAGFAPDSHAYTSFVVGYCRAGLLAHACRLFVL 132

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M + G V    TY  ++ GLC  G +R A+++   M   GC PD   Y T++  +   G+
Sbjct: 133 MPLRGCVRTAFTYTALLHGLCGAGMVREAMSVFAGMQADGCAPDPHVYATMVHGLCGAGR 192

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A     D + +G  P ++ Y  LI+  C    +  A++V + M + GCSP++ TY  
Sbjct: 193 TREAETLLSDAMAEGFEPNVVVYNALIDGYCNVGDLELAVDVFERMDVNGCSPNVRTYTE 252

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  CK  K D A+++ + ++  G+ PN +TY  L+    S G  D   ++L  M  + 
Sbjct: 253 LISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTYTALIQGQCSDGQLDCAYRLLQSMENSG 312

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P  +T ++LI+ LCK+  V  A      ++ K  + + + Y +++  LCK G    A 
Sbjct: 313 LVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQKGIKVNEIVYTSLIDGLCKAGRFAAAD 372

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L+  L      P   TY++LIDGL ++  + +AM++   MME G+ P  +T+  +I   
Sbjct: 373 RLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAMLVLDDMMEKGVQPSPVTYTIIIDEL 432

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            R    + +  +L ++   G K     Y + +   C   +++ A  ++  M+     P+ 
Sbjct: 433 VREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSYCHEGRMEDAEHMMLHMVDHGVCPNL 492

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
             ++ ++   A+ G+T +A+  ++ ++
Sbjct: 493 VTYNALICGYANLGLTSQAFSTFKHMV 519



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 116/456 (25%), Positives = 204/456 (44%), Gaps = 5/456 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D       +  +C  G L  A +L  +M  R  +        L+ GL     + +A  V 
Sbjct: 106 DSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVREAMSVF 165

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD   Y  MV GLC  G+ R A  LL +    G EP+V+ YN ++    + 
Sbjct: 166 AGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALIDGYCNV 225

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  + A+  ++     GC P + TYT LI   CK   + RA+ +   M   G  P++VTY
Sbjct: 226 GDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVPNVVTY 285

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L+   C  G+ D A  ++ ++ + G+ PN  T + L+ +L           +L  + +
Sbjct: 286 TALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSLIQ 345

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                    Y  LI+GLCK G    A      +VS+   PD  TY++++  LC++  L+E
Sbjct: 346 KGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSE 405

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ +L  +      P  +TY  +ID L ++   + +  +  +M+  GI PD  T+   + 
Sbjct: 406 AMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVR 465

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            +C   ++E+A  ++  +   G       Y  +I G         A    + M+++  KP
Sbjct: 466 SYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGCKP 525

Query: 536 DDTVFST----IVKKVADDGMTEEAYKLWQKLIEWK 567
           ++  ++     ++KK + + +   +  +W K+ E K
Sbjct: 526 NEESYTVLLRLLIKKESSNNIPANSVSIW-KIAEMK 560



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 119/448 (26%), Positives = 188/448 (41%), Gaps = 4/448 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  L        L D       M  RN          LI        +  + + L  ++ 
Sbjct: 45  NAFLMALARHRMLADMESFASRMPARN----LRTYTTLINAYCLAGDLPASKRHLSSLLR 100

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PD+  Y   V G C+ G +  A  L   M + GC     TY  +L  +   G  ++
Sbjct: 101 AGFAPDSHAYTSFVVGYCRAGLLAHACRLFVLMPLRGCVRTAFTYTALLHGLCGAGMVRE 160

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +      GC P    Y  ++  +C       A  +L D   EG  P++V YN+L++
Sbjct: 161 AMSVFAGMQADGCAPDPHVYATMVHGLCGAGRTREAETLLSDAMAEGFEPNVVVYNALID 220

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G  + AV V   +   G  PN  TY  L+         D    +   M +A   P
Sbjct: 221 GYCNVGDLELAVDVFERMDVNGCSPNVRTYTELISGFCKSRKLDRAMMLFSRMVDAGLVP 280

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY  LI G C  G +D A      M +    P+  T + ++ ALCK   + EA  LL
Sbjct: 281 NVVTYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLL 340

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             L         I Y +LIDGL K G    A  L   ++  G  PD  T+ +LI G CR 
Sbjct: 341 GSLIQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQ 400

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++ EA+ +L ++ ++G +     Y ++I  L +    D + ++L+ MI++  KPD   +
Sbjct: 401 KELSEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTY 460

Query: 541 STIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +  V+    +G  E+A  +   +++  V
Sbjct: 461 TIFVRSYCHEGRMEDAEHMMLHMVDHGV 488



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/460 (23%), Positives = 209/460 (45%), Gaps = 30/460 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++Q  CS G+L  A +L+  M     +P+   C  LI  L + +R+ +A  +L  +
Sbjct: 284 TYTALIQGQCSDGQLDCAYRLLQSMENSGLVPNEWTCSVLIDALCKHERVGEAQLLLGSL 343

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   + I Y  ++ GLCK G+  +A  L+  +   G  PD  TY++++  +    + 
Sbjct: 344 IQKGIKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKEL 403

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+    D + KG  P  +TYTI+I+++ ++ G   + ++LD M   G  PD+ TY   
Sbjct: 404 SEAMLVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIF 463

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V   C +G+ +DA  ++ +++  G+ PN +TYN L+    + G           M     
Sbjct: 464 VRSYCHEGRMEDAEHMMLHMVDHGVCPNLVTYNALICGYANLGLTSQAFSTFKHMVANGC 523

Query: 359 SPTVFTYNILINGLCK-----------------------YGLVDRAINSFNQMVSKNCQP 395
            P   +Y +L+  L K                       +GL++       +MV      
Sbjct: 524 KPNEESYTVLLRLLIKKESSNNIPANSVSIWKIAEMKYLHGLLE-------EMVKLQLPS 576

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +I  YN  L +LC+   L+EA  LL  +  ++ +P    Y ++I    +   + +A+   
Sbjct: 577 EIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIACCCRLKMLTEALTFV 636

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M+++G  P   ++R +I   C    ++ A  +  ++  +       A+R++I GL + 
Sbjct: 637 DSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYEEIAWRILIDGLLQK 696

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
             V     +L +M    Y+P D +++ +  K+ D    +E
Sbjct: 697 GYVAECSSLLSVMEEKNYRPSDALYARLTGKITDANDIQE 736



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 97/399 (24%), Positives = 168/399 (42%), Gaps = 31/399 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ +E     ++   C  G+   A +L+  +  +  +PD H   +LI GL R   + +A 
Sbjct: 348 IKVNEIVYTSLIDGLCKAGRFAAADRLMQTLVSQGFVPDAHTYSSLIDGLCRQKELSEAM 407

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL  M+  G  P  +TY +++  L +      +  +LD+M  +G +PDV TY   +R+ 
Sbjct: 408 LVLDDMMEKGVQPSPVTYTIIIDELVREVGADGSKKILDKMIAAGIKPDVFTYTIFVRSY 467

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA------RAIEVLDDMAIE 286
              G+ + A       +  G  P L+TY  LI      CG A      +A      M   
Sbjct: 468 CHEGRMEDAEHMMLHMVDHGVCPNLVTYNALI------CGYANLGLTSQAFSTFKHMVAN 521

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GC P+  +Y  L+    K+          NN+ +  +    I     LH L         
Sbjct: 522 GCKPNEESYTVLLRLLIKKESS-------NNIPANSVSIWKIAEMKYLHGL--------- 565

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
              L+ M +      +  YN  +  LC+   +D A     +M S N  P    Y +++  
Sbjct: 566 ---LEEMVKLQLPSEIDIYNCFLTSLCRVDRLDEAKILLIEMQSANLTPSEDVYTSIIAC 622

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            C+  ML EAL  +  +  S   P L +Y  +I  L ++G ++ A  ++G M+    + +
Sbjct: 623 CCRLKMLTEALTFVDSMVKSGYIPQLESYRHIISSLCEEGSIQTAKQVFGDMLSKEYNYE 682

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           +I  R LI G  +   V E   LL  + ++  +  ++ Y
Sbjct: 683 EIAWRILIDGLLQKGYVAECSSLLSVMEEKNYRPSDALY 721


>gi|346703736|emb|CBX24404.1| hypothetical_protein [Oryza glaberrima]
          Length = 1765

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 215/443 (48%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N++L+    + +  DA KL D M  ++   D +    L+RGL    R+E+  K+++    
Sbjct: 1116 NRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1175

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            +G +P  + YN+++ G C+RG +   + LL EM   G  P ++TY +++  +   G  ++
Sbjct: 1176 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEK 1235

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                + +  ++G  P +  Y  +I+ +CK     +A+ +L  M   GC PDI+T+N+L+ 
Sbjct: 1236 IGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLIT 1295

Query: 301  FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              C +G    A   +   + R + PN ++Y  L+H    RG       +L  M    H+P
Sbjct: 1296 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTP 1355

Query: 361  TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             V T+  LI+GL   G V  A+    +M  +   PD+  YN ++  LCK+ ML  A  +L
Sbjct: 1356 DVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNIL 1415

Query: 421  HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              +   +  P    Y TLIDG  +   +  A  ++  M   GI PD ++   +I G+C+ 
Sbjct: 1416 EEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQF 1475

Query: 481  DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
              + EA+  +  + K G       Y  VI G  K   ++ A++ L  MI  + KP+   +
Sbjct: 1476 GMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 1535

Query: 541  STIVKKVADDGMTEEAYKLWQKL 563
            S+++      G T+ A  L+  +
Sbjct: 1536 SSLINGYCKTGDTDFAEGLFANM 1558



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/424 (27%), Positives = 202/424 (47%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++  +C RG +     L+  M  +  +P      +LI  L +   +EK   +   M  
Sbjct: 1186 NVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRK 1245

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
             G  P+   YN ++  LCK      A+ +L +M  SGC+PD+IT+NT++  +   G  ++
Sbjct: 1246 RGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRK 1305

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A  F ++ +R+   P  ++YT LI   C +  +  A ++L +M   G +PD+VT+ +L++
Sbjct: 1306 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIH 1365

Query: 301  FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                 GK  +A++V   +  R + P+   YN L+  L  +    A   IL+ M E +  P
Sbjct: 1366 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQP 1425

Query: 361  TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              F Y  LI+G  +   +  A   F  M  K   PDIV+ N ++   C+ GM++EA+  +
Sbjct: 1426 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCM 1485

Query: 421  HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              +    C P   TY T+I G AK+G +  A+     M++    P+ +T+ +LI G+C+ 
Sbjct: 1486 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 1545

Query: 481  DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
               + A  L   +           Y ++I  L K  KV  A    E M+ +   P+D   
Sbjct: 1546 GDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 1605

Query: 541  STIV 544
              +V
Sbjct: 1606 HYLV 1609



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 98/371 (26%), Positives = 184/371 (49%), Gaps = 1/371 (0%)

Query: 175  LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMF 233
            LQ M ++G  P       +V      G +  A  + + +    G  P+V   N +L+ + 
Sbjct: 1064 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATKMCERVREQYGSLPEVTHCNRLLKLLV 1123

Query: 234  DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +  ++  A   + + L K       +  +L+  +C +  +   +++++     GC P +V
Sbjct: 1124 EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVV 1183

Query: 294  TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
             YN L++  C++G     +L++  + ++G  P  +TY +L++ LG +G  + +  +   M
Sbjct: 1184 FYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1243

Query: 354  NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
             +   SP V  YN +I+ LCK     +A+    QM +  C PDI+T+NT++  LC EG +
Sbjct: 1244 RKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1303

Query: 414  NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             +A   L        +P  ++Y  LI G   +G +  A  L  +MM  G +PD +T   L
Sbjct: 1304 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGAL 1363

Query: 474  IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
            I G   A +V EA+ + +++ +R      + Y ++I GLCK + +  A  +LE M+    
Sbjct: 1364 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1423

Query: 534  KPDDTVFSTIV 544
            +PD+ V++T++
Sbjct: 1424 QPDEFVYATLI 1434



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 200/440 (45%), Gaps = 26/440 (5%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N ++   C  G +  A   +    RR   P+      LI G      +  AS +L  M
Sbjct: 1289 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1348

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +  G  PD +T+  ++ GL   G++  A+ + ++M+     PDV  YN ++  +      
Sbjct: 1349 MGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRML 1408

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
              A    ++ L K   P    Y  LI+   +   +  A ++ + M  +G  PDIV+ N++
Sbjct: 1409 PAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGICPDIVSCNAM 1468

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            +   C+ G   +A+L ++N+   G  P+  TY T++     +G  +   + L  M +   
Sbjct: 1469 IKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKC 1528

Query: 359  SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE------GM 412
             P V TY+ LING CK G  D A   F  M ++   P++VTY  ++G+L K+      G+
Sbjct: 1529 KPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGL 1588

Query: 413  LNEALQLLH----------LLNG-SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
              E + L H          L+NG +SC+PC+I  N++    ++    +  +V++ +++ +
Sbjct: 1589 YFETMLLNHCSPNDVTLHYLVNGLTSCTPCVI--NSICCNTSEVHGKDALLVVFKKLVFD 1646

Query: 462  GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK---- 517
               P +  +  +I+  CR + + EA+D    + K+G       +  +++G C   K    
Sbjct: 1647 IGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNW 1706

Query: 518  ---VDMAIQVLELMISSRYK 534
               +    Q  E  I  RYK
Sbjct: 1707 RTILPNEFQQEEFEIIFRYK 1726



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 139/313 (44%), Gaps = 19/313 (6%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D    N ++   C +  L  A  +++ M  +N  PD      LI G IR + +  A K+ 
Sbjct: 1391 DVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1450

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            + M   G  PD ++ N M+ G C+ G +  AI  +  M   GC PD  TY T++      
Sbjct: 1451 EFMEHKGICPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1510

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            G    A+ +  D +++ C P ++TY+ LI   CK      A  +  +M  E  SP++VTY
Sbjct: 1511 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDFAEGLFANMQAEALSPNVVTY 1570

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV--------- 346
              L+    K+ K   A L    +L     PN +T + L++ L S  C   V         
Sbjct: 1571 TILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTS--CTPCVINSICCNTS 1628

Query: 347  -----DKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
                 D +L +  +       P    YN +I  LC++ ++  A++  N+M  K   P+ +
Sbjct: 1629 EVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPI 1688

Query: 399  TYNTVLGALCKEG 411
            T+ ++L   C  G
Sbjct: 1689 TFLSLLYGFCSVG 1701



 Score =  122 bits (306), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 80/283 (28%), Positives = 136/283 (48%)

Query: 287  GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
            G  P++   N L+    +Q ++DDA  + + +L +    ++ +   L+  L      +  
Sbjct: 1107 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEG 1166

Query: 347  DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             K+++    A   P V  YN+LI+G C+ G + R +    +M +K   P +VTY +++  
Sbjct: 1167 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETKGFLPTLVTYGSLINW 1226

Query: 407  LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            L K+G L +   L   +     SP +  YN++ID L K     +AMV+  QM  +G  PD
Sbjct: 1227 LGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCKCRSATQAMVILKQMFASGCDPD 1286

Query: 467  DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             IT  TLI G C    V +A   L+E  +R       +Y  +IHG C   ++ +A  +L 
Sbjct: 1287 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLV 1346

Query: 527  LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             M+   + PD   F  ++  +   G   EA  + +K+ E +VF
Sbjct: 1347 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 1389


>gi|297800016|ref|XP_002867892.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
 gi|297313728|gb|EFH44151.1| EMB1025 [Arabidopsis lyrata subsp. lyrata]
          Length = 658

 Score =  206 bits (523), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 129/450 (28%), Positives = 234/450 (52%), Gaps = 25/450 (5%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMAR-------RNQIPDFHFCINLI------ 159
           +EN        +  F + GK     K +D+  R       +  +  F+  +N+I      
Sbjct: 105 LENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLY 164

Query: 160 -RGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
            RGL   D +  ++  + I       P+ +++N+++  LCK G +  AI +   M    C
Sbjct: 165 HRGLEFYDYVVNSNMNMNI------SPNGLSFNLVIKALCKLGFVDRAIEVFRGMPEKKC 218

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
            PD  TY T++  +    +  +A+    +   +GC P  + Y +LI+ +CK+  ++R  +
Sbjct: 219 LPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTK 278

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL- 337
           ++D+M ++GC P+ VTYN+L++  C +GK D AV ++  ++S    PN +TY TL++ L 
Sbjct: 279 LVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLV 338

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             R   D   ++L  M E  +      Y++LI+GL K G  + A+  + +M  K C+P+I
Sbjct: 339 KQRRAMDGA-RLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNI 397

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V Y+ V+  LC+EG  NEA ++L+ +  S C P + TY++L+ G  K G  E+A+ ++ +
Sbjct: 398 VVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWRE 457

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M E G S ++  +  LI G C   +V+EA+ +  ++   G K    AY  +I GLC    
Sbjct: 458 MDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGS 517

Query: 518 VDMAIQVLELMI---SSRYKPDDTVFSTIV 544
           +D A+++   M+     + +PD   ++ ++
Sbjct: 518 MDAALKLYHEMLCQEEPKSQPDVVTYNILL 547



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 114/411 (27%), Positives = 208/411 (50%), Gaps = 4/411 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+ L ++  +++A +V + M     +PD  TY  ++ GLCK  +I  A+ LLDEM   G
Sbjct: 193 VIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEG 252

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C P  + YN ++  +   G   +      +   KGC P  +TY  LI  +C +  + +A+
Sbjct: 253 CSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAV 312

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L+ M    C P+ VTY +L+N   KQ +  D   ++ ++  RG   N   Y+ L+  L
Sbjct: 313 SLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGL 372

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +    +   M E    P +  Y+ +I+GLC+ G  + A    N M+S  C P++
Sbjct: 373 FKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNV 432

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            TY++++    K G+  EA+Q+   ++ + CS     Y+ LIDGL   G +++AM+++ +
Sbjct: 433 YTYSSLMKGFFKTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSK 492

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI---GKRGNKMRNSAYRLVIHGLCK 514
           M+  GI PD + + ++I G C    ++ A+ L  E+    +  ++     Y +++ GLC 
Sbjct: 493 MLTIGIKPDTVAYSSMIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGLCM 552

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT-EEAYKLWQKLI 564
            K V  A+ +L  M+     PD    +T +  +++   + EE     ++L+
Sbjct: 553 QKDVSRAVDLLNCMLDRGCDPDVITCNTFLNTLSEKSDSCEEGRSFLEELV 603



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 224/453 (49%), Gaps = 20/453 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C   ++ +A  L+D M      P       LI GL +   + + +K++
Sbjct: 221 DGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCKKGDLSRVTKLV 280

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G  P+ +TYN ++ GLC +G++  A++LL+ M  S C P+ +TY T++  +   
Sbjct: 281 DNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVTYGTLINGLVKQ 340

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +             +G       Y++LI  + K+     A+ +   MA +GC P+IV Y
Sbjct: 341 RRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMTLWKKMAEKGCRPNIVVY 400

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +++++  C++GK ++A  ++N ++S G  PN  TY++L+      G  +   ++   M+E
Sbjct: 401 SAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFFKTGLSEEAIQVWREMDE 460

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              S   F Y++LI+GLC  G V  A+  +++M++   +PD V Y++++  LC  G ++ 
Sbjct: 461 TGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTVAYSSMIKGLCGIGSMDA 520

Query: 416 ALQLLHLL---NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           AL+L H +         P ++TYN L+DGL  +  + +A+ L   M++ G  PD IT  T
Sbjct: 521 ALKLYHEMLCQEEPKSQPDVVTYNILLDGLCMQKDVSRAVDLLNCMLDRGCDPDVITCNT 580

Query: 473 LIWGFC-RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            +     ++D  EE    L+E+  R               L K ++V  A +++E+M+  
Sbjct: 581 FLNTLSEKSDSCEEGRSFLEELVAR---------------LLKRQRVSGACKIVEVMLGK 625

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAY-KLWQKL 563
              P  + ++ IV ++        A  K W+ L
Sbjct: 626 YLAPKTSTWAMIVPEICKPKKINAAINKCWRNL 658



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 107/386 (27%), Positives = 191/386 (49%), Gaps = 39/386 (10%)

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFW----KDQLRKGCPPYLITYTILIEQVCKQCGI 273
           C+  V ++N++L  + + G + + + F+       +     P  +++ ++I+ +CK   +
Sbjct: 144 CKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLGFV 203

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            RAIEV   M  + C PD  TY +L++  CK+ + D+AVL+++ + S G  P+ + YN L
Sbjct: 204 DRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVL 263

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L  +G    V K++D M      P   TYN LI+GLC  G +D+A++   +MVS  C
Sbjct: 264 IDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKC 323

Query: 394 QPDIVTYNTVLGALC-----------------------------------KEGMLNEALQ 418
            P+ VTY T++  L                                    KEG   EA+ 
Sbjct: 324 IPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLISGLFKEGKAEEAMT 383

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +    C P ++ Y+ +IDGL ++G   +A  +   M+ +G  P+  T+ +L+ GF 
Sbjct: 384 LWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCLPNVYTYSSLMKGFF 443

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +    EEA+ + +E+ + G       Y ++I GLC   +V  A+ V   M++   KPD  
Sbjct: 444 KTGLSEEAIQVWREMDETGCSRNEFCYSVLIDGLCGVGRVKEAMMVWSKMLTIGIKPDTV 503

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            +S+++K +   G  + A KL+ +++
Sbjct: 504 AYSSMIKGLCGIGSMDAALKLYHEML 529



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 93/331 (28%), Positives = 166/331 (50%), Gaps = 40/331 (12%)

Query: 275 RAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAV----LVINNLLSRGMEPNSIT 329
           +A+++   M  E  C   + ++NS++N    +G Y   +     V+N+ ++  + PN ++
Sbjct: 130 KAVDLFHRMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLS 189

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           +N ++ +L   G  D   ++   M E    P  +TY  L++GLCK   +D A+   ++M 
Sbjct: 190 FNLVIKALCKLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQ 249

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           S+ C P  V YN ++  LCK+G L+   +L+  +    C P  +TYNTLI GL  KG ++
Sbjct: 250 SEGCSPSPVIYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLD 309

Query: 450 KAMVLYGQMMENGISPDDITHRT-----------------------------------LI 474
           KA+ L  +M+ +   P+D+T+ T                                   LI
Sbjct: 310 KAVSLLERMVSSKCIPNDVTYGTLINGLVKQRRAMDGARLLISMEERGYRLNQHIYSVLI 369

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G  +  + EEA+ L K++ ++G +     Y  VI GLC+  K + A ++L  MISS   
Sbjct: 370 SGLFKEGKAEEAMTLWKKMAEKGCRPNIVVYSAVIDGLCREGKPNEAKEILNGMISSGCL 429

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           P+   +S+++K     G++EEA ++W+++ E
Sbjct: 430 PNVYTYSSLMKGFFKTGLSEEAIQVWREMDE 460



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 129/251 (51%), Gaps = 5/251 (1%)

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           T ++++ +  + G + +V+K+L  +   +      ++ ++     K  L ++A++ F++M
Sbjct: 79  TLSSMIENYANLGDFASVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPEKAVDLFHRM 138

Query: 389 VSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS----CSPCLITYNTLIDGLA 443
           V +  C+  + ++N+VL  +  EG+ +  L+    +  S+     SP  +++N +I  L 
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G +++A+ ++  M E    PD  T+ TL+ G C+ ++++EAV LL E+   G      
Sbjct: 199 KLGFVDRAIEVFRGMPEKKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y ++I GLCK   +    ++++ M      P++  ++T++  +   G  ++A  L +++
Sbjct: 259 IYNVLIDGLCKKGDLSRVTKLVDNMFLKGCFPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318

Query: 564 IEWKVFEKGTT 574
           +  K      T
Sbjct: 319 VSSKCIPNDVT 329


>gi|302763357|ref|XP_002965100.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
 gi|300167333|gb|EFJ33938.1| hypothetical protein SELMODRAFT_83796 [Selaginella moellendorffii]
          Length = 603

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 228/453 (50%), Gaps = 5/453 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L      G L+DA            +  F+    L+RG    D  E  + +L+ M
Sbjct: 98  TRNSLLLALVRGGHLSDALGFFQSSISEPNVSSFNI---LLRGFAARDDFEVVNALLREM 154

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G   +  T+ +++  LC R  +  A++  + +S + CEP + TY  ++  +    K 
Sbjct: 155 KSRGITSNGATHGVILSALCARRDLDKAVSYFNSVSPNKCEPTLFTYTVLVDGLCKAHKV 214

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A   +++ +RKG  P +I Y+ LI+ + K   +  A +++D M   G  P  V Y S+
Sbjct: 215 ERACDVFEEMIRKGYKPDIIAYSSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSI 274

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V   CK G+  +AV  I  +  R + P   TY+ ++      G  +    +++ M +   
Sbjct: 275 VAGLCKCGRIQEAVKTIQEMRRRRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDC 334

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   +Y + I  L   G  + A   F  MV K C+PD+ TY  ++   CKEG +  A  
Sbjct: 335 APDTISYTMFIEALYSIGRREEAEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATH 394

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L L++ ++  P    Y  ++DG  K   +E+A+ LY +++++GI P  +T+ T+I   C
Sbjct: 395 VLRLMDKAAVKPNRYIYTMIMDGFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALC 454

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +  +++EA++LL+E+ +R  ++  S   Y ++IHGL K    + A  +L  MI +   PD
Sbjct: 455 KLKKMDEALELLREMQRRKEELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPD 514

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
              ++++++ +A  G    A +L +++++  +F
Sbjct: 515 CFTYTSLIQTLAGAGKVSRAMELLEEMLKAGIF 547



 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 126/470 (26%), Positives = 235/470 (50%), Gaps = 5/470 (1%)

Query: 80  SESHVLAVNKKLRGLTITKKSH--DPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDAS 137
           SE +V + N  LRG          +  L       + ++  T+  IL   C+R  L  A 
Sbjct: 124 SEPNVSSFNILLRGFAARDDFEVVNALLREMKSRGITSNGATHGVILSALCARRDLDKAV 183

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
              + ++     P       L+ GL +  ++E+A  V + M+  G  PD I Y+ ++ GL
Sbjct: 184 SYFNSVSPNKCEPTLFTYTVLVDGLCKAHKVERACDVFEEMIRKGYKPDIIAYSSLIDGL 243

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
            K G++  A  L+D M   G  P  + Y +I+  +   G+ ++A+   ++  R+   P +
Sbjct: 244 SKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRRRRLRPRV 303

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            TY+ ++        + +A  V+++MA   C+PD ++Y   +      G+ ++A  V   
Sbjct: 304 DTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREEAEKVFET 363

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           ++ +G +P+  TY  ++ +    G   A   +L +M++A+  P  + Y ++++G  K   
Sbjct: 364 MVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMDGFVKSSR 423

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN--GSSCSPCLITY 435
           ++ A+  + +++     P  VTYNTV+ ALCK   ++EAL+LL  +        P ++TY
Sbjct: 424 LEEALELYQRILKDGILPSTVTYNTVINALCKLKKMDEALELLREMQRRKEELEPSIVTY 483

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           + +I GL K G  E+A  L  +M++NG+ PD  T+ +LI     A +V  A++LL+E+ K
Sbjct: 484 SMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSRAMELLEEMLK 543

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
            G    +  Y  ++  LC+S  VD A  +L+ M+ + + P++  F  + K
Sbjct: 544 AGIFPDDHTYGTLVQILCRS-DVDAAWDLLQEMMRNGHTPNEFTFKAVEK 592



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 99/362 (27%), Positives = 190/362 (52%), Gaps = 9/362 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++      G++ +A KL+D+M  R   P      +++ GL +  RI++A K +Q M  
Sbjct: 237 SSLIDGLSKAGRVDEARKLVDLMVARGPPPTAVAYTSIVAGLCKCGRIQEAVKTIQEMRR 296

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P   TY+ +V G    G++  A A+++EM+   C PD I+Y   +  ++  G+ ++
Sbjct: 297 RRLRPRVDTYSFIVTGYIGMGKVEKAFAVMEEMADRDCAPDTISYTMFIEALYSIGRREE 356

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   ++  + KGC P + TY I+I+  CK+  +A A  VL  M      P+   Y  +++
Sbjct: 357 AEKVFETMVEKGCKPDMHTYGIIIDNFCKEGSMAAATHVLRLMDKAAVKPNRYIYTMIMD 416

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH-- 358
              K  + ++A+ +   +L  G+ P+++TYNT++++L        +D+ L+++ E     
Sbjct: 417 GFVKSSRLEEALELYQRILKDGILPSTVTYNTVINALCK---LKKMDEALELLREMQRRK 473

Query: 359 ---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P++ TY+++I+GL K G+ +RA +   +M+     PD  TY +++  L   G ++ 
Sbjct: 474 EELEPSIVTYSMIIHGLGKVGMEERAFDLLAEMIDNGVIPDCFTYTSLIQTLAGAGKVSR 533

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A++LL  +  +   P   TY TL+  L +   ++ A  L  +MM NG +P++ T + +  
Sbjct: 534 AMELLEEMLKAGIFPDDHTYGTLVQILCRSD-VDAAWDLLQEMMRNGHTPNEFTFKAVEK 592

Query: 476 GF 477
           GF
Sbjct: 593 GF 594


>gi|147819071|emb|CAN69810.1| hypothetical protein VITISV_043106 [Vitis vinifera]
          Length = 847

 Score =  205 bits (522), Expect = 4e-50,   Method: Compositional matrix adjust.
 Identities = 114/372 (30%), Positives = 198/372 (53%)

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           ++++    K+  +   +++ D+M  S   PDV   N ILR + D     +A+  ++    
Sbjct: 474 DLLIWVYSKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGE 533

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P ++TY  L++  CK   + + +++L +M   GC+P+ VTYN L+N   K+G+++ 
Sbjct: 534 FGIKPTIVTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQ 593

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  +I  +L  G++ ++ TYN L++   ++G       + + M     SPTV TYN  I 
Sbjct: 594 AKGLIGEMLKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIY 653

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GLCK G +  A+   + M++ N  PD+V+YNT++   C+ G L +A  L   L      P
Sbjct: 654 GLCKLGRMSDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFP 713

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            ++TYNTL+DGL ++G +E A  L  +M+  GI+PD +T+  L+ G C+   +  A +  
Sbjct: 714 TIVTYNTLLDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFF 773

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+   G ++ + AY   I G  K      A  + E M++  + PD  +++ +V  +   
Sbjct: 774 DEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKL 833

Query: 551 GMTEEAYKLWQK 562
           G  EEA +L QK
Sbjct: 834 GNLEEASELLQK 845



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 108/356 (30%), Positives = 182/356 (51%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           + D M +    PD   C  ++R L   D + KA +V + M   G  P  +TYN ++   C
Sbjct: 492 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 551

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K G+++  + LL EM   GC P+ +TYN ++  +   G+F+QA G   + L+ G      
Sbjct: 552 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 611

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY  LI     +  +A A+ + ++M ++G SP + TYNS +   CK G+  DA+  ++++
Sbjct: 612 TYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 671

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L+  + P+ ++YNTL++     G       + D +      PT+ TYN L++GLC+ G +
Sbjct: 672 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGEL 731

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + A     +M+++   PDIVTY  ++   CK G L+ A +    +           Y T 
Sbjct: 732 EVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATR 791

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           I G  K G   +A  L  +M+  G  PD I +  ++ G C+   +EEA +LL++ G
Sbjct: 792 IVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELLQKDG 847



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/337 (29%), Positives = 169/337 (50%), Gaps = 2/337 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D K  N+IL+    +  ++ A ++   M      P       L+    +  ++++   +L
Sbjct: 504 DVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYCKGGKVQQGLDLL 563

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ +TYN+++ GL K+G+   A  L+ EM  +G +    TYN ++   F+ 
Sbjct: 564 SEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAYTYNPLIYGYFNK 623

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+   ++ + KG  P + TY   I  +CK   ++ A++ L DM      PD+V+Y
Sbjct: 624 GLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDMLANNLLPDVVSY 683

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI-LDIMN 354
           N+L+   C+ G    A L+ + L S  + P  +TYNTLL  L  +G  +   ++ ++++N
Sbjct: 684 NTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLKVEMIN 743

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E   +P + TY IL+NG CK G +  A   F++M+ +  + D   Y T +    K G  +
Sbjct: 744 EGI-APDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTS 802

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
            A  L   +      P LI YN ++DGL K G +E+A
Sbjct: 803 RAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEA 839



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 87/303 (28%), Positives = 146/303 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L ++C  GK+     L+  M RR   P+      LI GL +    E+A  ++  M
Sbjct: 542 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 601

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G      TYN ++ G   +G +  A++L +EM + G  P V TYN+ +  +   G+ 
Sbjct: 602 LKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRM 661

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+    D L     P +++Y  LI   C+   + +A  + D++      P IVTYN+L
Sbjct: 662 SDAMQQLSDMLANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTL 721

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C+QG+ + A  +   +++ G+ P+ +TY  L++     G      +  D M     
Sbjct: 722 LDGLCRQGELEVAQQLKVEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGL 781

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
               + Y   I G  K G   RA +   +M++K   PD++ YN V+  LCK G L EA +
Sbjct: 782 ELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASE 841

Query: 419 LLH 421
           LL 
Sbjct: 842 LLQ 844



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 69/221 (31%), Positives = 118/221 (53%)

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + D M ++  SP V   N ++  L    L+ +A+  +  M     +P IVTYNT+L + C
Sbjct: 492 VFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIVTYNTLLDSYC 551

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G + + L LL  +    C+P  +TYN LI+GL+KKG  E+A  L G+M++ G+     
Sbjct: 552 KGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEMLKTGLKVSAY 611

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  LI+G+     + EA+ L +E+  +G     + Y   I+GLCK  ++  A+Q L  M
Sbjct: 612 TYNPLIYGYFNKGLLAEALSLQEEMVLKGASPTVATYNSFIYGLCKLGRMSDAMQQLSDM 671

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           +++   PD   ++T++      G   +A+ L+ +L    +F
Sbjct: 672 LANNLLPDVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLF 712



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/165 (30%), Positives = 75/165 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N ++  +C  G L  A  L D +      P       L+ GL R   +E A ++ 
Sbjct: 679 DVVSYNTLIYGYCRLGNLMKAFLLFDELRSIYLFPTIVTYNTLLDGLCRQGELEVAQQLK 738

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PD +TY ++V G CK G +  A    DEM   G E D   Y T +      
Sbjct: 739 VEMINEGIAPDIVTYTILVNGSCKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKL 798

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           G   +A    ++ L KG PP LI Y ++++ +CK   +  A E+L
Sbjct: 799 GDTSRAFSLQEEMLAKGFPPDLIIYNVVVDGLCKLGNLEEASELL 843



 Score = 71.2 bits (173), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/156 (26%), Positives = 82/156 (52%)

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K+ M+ + L +   +  S  SP +   N ++  L  K  M KA+ +Y  M E GI P  +
Sbjct: 482 KKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTIV 541

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ TL+  +C+  +V++ +DLL E+ +RG    +  Y ++I+GL K  + + A  ++  M
Sbjct: 542 TYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGEM 601

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + +  K     ++ ++    + G+  EA  L ++++
Sbjct: 602 LKTGLKVSAYTYNPLIYGYFNKGLLAEALSLQEEMV 637



 Score = 44.3 bits (103), Expect = 0.20,   Method: Compositional matrix adjust.
 Identities = 26/85 (30%), Positives = 40/85 (47%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  G L+ A +  D M       D +     I G +++    +A  + + M+  G  PD 
Sbjct: 761 CKMGSLSMAQEFFDEMLHEGLELDSYAYATRIVGELKLGDTSRAFSLQEEMLAKGFPPDL 820

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDE 212
           I YN++V GLCK G +  A  LL +
Sbjct: 821 IIYNVVVDGLCKLGNLEEASELLQK 845



 Score = 43.9 bits (102), Expect = 0.21,   Method: Compositional matrix adjust.
 Identities = 26/123 (21%), Positives = 62/123 (50%)

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
           +KK  +E+ + ++ +M+++ +SPD      ++      D + +AV++ + +G+ G K   
Sbjct: 481 SKKSMVEQCLSVFDKMIKSRLSPDVKNCNRILRILRDKDLMSKAVEVYRTMGEFGIKPTI 540

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  ++   CK  KV   + +L  M      P+D  ++ ++  ++  G  E+A  L  +
Sbjct: 541 VTYNTLLDSYCKGGKVQQGLDLLSEMQRRGCAPNDVTYNVLINGLSKKGEFEQAKGLIGE 600

Query: 563 LIE 565
           +++
Sbjct: 601 MLK 603


>gi|413924892|gb|AFW64824.1| hypothetical protein ZEAMMB73_716034 [Zea mays]
          Length = 721

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 220/460 (47%), Gaps = 3/460 (0%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           + +  G F  ND  T N ++      G L +A KL+D M    +   F +   LI  L+ 
Sbjct: 263 METQGGGFSLND-VTFNVVISFLAREGHLENAVKLVDSMRLSKKASSFTYN-PLITALLE 320

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
              + KA  +   M   G +P  +TYN ++ GL K  Q  +A     EM   G  PDVIT
Sbjct: 321 RGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQVKFAEMRAMGLLPDVIT 380

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN++L      G  K+A+    D  R G  P ++TY  LI+  C+   +A A  + ++M 
Sbjct: 381 YNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRLKEEMV 440

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +GC PD+ TY  L+N S K      A    + +LS+G++P+   YNT + +  +     
Sbjct: 441 EQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNTRICAELTLSSTP 500

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
              ++ ++M      P   TYN++I+GLCK G +  A     +MVS   QPD +TY  ++
Sbjct: 501 MAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPDCITYTCLI 560

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            A C+ G+L EA +LL+ +      P ++TY  L+    ++G +  A   + +M++ GI 
Sbjct: 561 HAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFRKMLDVGIE 620

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P++IT+  LI   C   +   A     E+ +RG       Y L+I G C+      AI++
Sbjct: 621 PNEITYNVLIHALCMTGRTPLAFRHFHEMLERGLAPNKYTYTLLIDGNCREGNWADAIRL 680

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              M  +   PD    + + K   D+G    A +  + ++
Sbjct: 681 YFEMHQNGIPPDYCTHNALFKGF-DEGHMYHAIEYMENIV 719



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 126/459 (27%), Positives = 222/459 (48%), Gaps = 11/459 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D +  N++L+      +  D   +   M +    P       L+   ++  R ++AS
Sbjct: 198 VAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDSFLKEGRKDEAS 257

Query: 173 KVLQIMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
            +L+ M   GG    + +T+N+++  L + G + +A+ L+D M +S  +    TYN ++ 
Sbjct: 258 MLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-KASSFTYNPLIT 316

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV-LDDMAIEGCS 289
            + + G  ++A     +   +G  P ++TY  +I  + K C  A A +V   +M   G  
Sbjct: 317 ALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLK-CEQAEAAQVKFAEMRAMGLL 375

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD++TYNSL+N  CK G   +A+ ++ +L   G+ P  +TYNTL+      G      ++
Sbjct: 376 PDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYCRLGDLAEARRL 435

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            + M E    P V TY IL+NG  K   +  A   F++M+SK  QPD   YNT    +C 
Sbjct: 436 KEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCFAYNT---RICA 492

Query: 410 EGMLNE---ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           E  L+    A QL  ++      P  +TYN +IDGL K G ++ A  L  +M+ +G+ PD
Sbjct: 493 ELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKMVSDGLQPD 552

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            IT+  LI   C    + EA  LL  +   G +     Y +++H  C+   +  A     
Sbjct: 553 CITYTCLIHAHCERGLLREARKLLNGMVSDGLQPSVVTYTILVHTCCRRGNLYSAYGWFR 612

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            M+    +P++  ++ ++  +   G T  A++ + +++E
Sbjct: 613 KMLDVGIEPNEITYNVLIHALCMTGRTPLAFRHFHEMLE 651



 Score =  155 bits (391), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 105/361 (29%), Positives = 182/361 (50%), Gaps = 5/361 (1%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           +A    ++  G  PDV   N +LR + D  ++      + + L+    P ++TY  L++ 
Sbjct: 187 LAAFRLVTCHGVAPDVRDCNRVLRVLRDAARWDDVRAVYGEMLQLRVEPTIVTYNTLLDS 246

Query: 267 VCKQCGIARAIEVLDDMAIE--GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL-LSRGM 323
             K+     A  +L +M  +  G S + VT+N +++F  ++G  ++AV +++++ LS+  
Sbjct: 247 FLKEGRKDEASMLLKEMETQGGGFSLNDVTFNVVISFLAREGHLENAVKLVDSMRLSK-- 304

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           + +S TYN L+ +L  RG     + +   M      PTV TYN +I+GL K    + A  
Sbjct: 305 KASSFTYNPLITALLERGFVRKAEALQMEMENEGIMPTVVTYNAIIHGLLKCEQAEAAQV 364

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F +M +    PD++TYN++L   CK G L EAL LL  L  +  +P ++TYNTLIDG  
Sbjct: 365 KFAEMRAMGLLPDVITYNSLLNRYCKAGNLKEALWLLGDLRRAGLAPTVLTYNTLIDGYC 424

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           + G + +A  L  +M+E G  PD  T+  L+ G  +   +  A +   E+  +G +    
Sbjct: 425 RLGDLAEARRLKEEMVEQGCFPDVCTYTILMNGSRKVRNLAMAREFFDEMLSKGLQPDCF 484

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           AY   I          MA Q+ E+M+     PD   ++ I+  +   G  ++A +L  K+
Sbjct: 485 AYNTRICAELTLSSTPMAFQLREVMMLKGIYPDTVTYNVIIDGLCKTGNLKDAKRLKTKM 544

Query: 564 I 564
           +
Sbjct: 545 V 545


>gi|357449185|ref|XP_003594869.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483917|gb|AES65120.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 545

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 230/442 (52%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           KIL +     +   A  L   M      PDF  C  L+    ++  I+ +  V   ++  
Sbjct: 63  KILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKK 122

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD +T+ +++ GLC +G++  A+   D++   G + D ++Y T++  +   G+ K A
Sbjct: 123 GYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAA 182

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   +    K   P ++ Y+ +I+ +CK   +  A ++  +M  +  SPD+VTY+SL++ 
Sbjct: 183 VQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISG 242

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  GK   AV + N ++S  + PN  T++ L+      G       +L +M + +    
Sbjct: 243 FCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLD 302

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TYN L++G C    V++A + FN M  +   PD+ +Y+ ++   CK  M++EA++L  
Sbjct: 303 VVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFE 362

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++     P ++TYN+L+DGL K G    A+ L  +M + G   + IT+ +++   C+ +
Sbjct: 363 EMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNN 422

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            V++A+ LL +I ++G +     Y ++I+GLCK  ++D A +V E ++   Y P+   ++
Sbjct: 423 HVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYT 482

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
           +++    + G  +E   +  K+
Sbjct: 483 SLINGFCNKGFFDEGLAMLSKM 504



 Score =  198 bits (504), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 235/452 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  F   G +  +  +   + ++   PD      LI+GL     + KA 
Sbjct: 89  IKPDFITCNLLMNCFSQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKAL 148

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                +V  G   D ++Y  ++ GLC+ G+ ++A+ LL  +      P+V+ Y+TI+ +M
Sbjct: 149 YFHDKVVAQGFQLDQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSM 208

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +     A   + + + K   P ++TY+ LI   C    +  A+++ + M  +  +P++
Sbjct: 209 CKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNV 268

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T++ L++  CK+GK  +A  V+  ++ + ++ + +TYN+L+         +    + ++
Sbjct: 269 YTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNV 328

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +   +P V++Y+I+ING CK  +VD A+  F +M  K   P++VTYN+++  LCK G 
Sbjct: 329 MAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGR 388

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            + AL+L+  ++       +ITYN+++D + K   ++KA+VL  ++ E GI PD  T+  
Sbjct: 389 TSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTV 448

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C+  ++++A  + +++  +G       Y  +I+G C     D  + +L  M  + 
Sbjct: 449 LINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNG 508

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+   +  ++  + +    ++A KL +++I
Sbjct: 509 CIPNAITYEILIHSLFEKDENDKAEKLLREMI 540



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 109/384 (28%), Positives = 212/384 (55%), Gaps = 4/384 (1%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           +P  I +  ++G L K  Q ++A++L  +M  +G +PD IT N ++      G  K +  
Sbjct: 55  IPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGHIKFSFS 114

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +   L+KG  P  +T+TILI+ +C +  + +A+   D +  +G   D V+Y +L+N  C
Sbjct: 115 VFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGTLINGLC 174

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTV 362
           + G+   AV ++  +  + + PN + Y+T++ S+   +   DA D   +++++   SP V
Sbjct: 175 RVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRI-SPDV 233

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ LI+G C  G +  A++ FN+M+S N  P++ T++ ++   CKEG + EA  +L +
Sbjct: 234 VTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAV 293

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +   +    ++TYN+L+DG      + KA  L+  M + G++PD  ++  +I GFC+   
Sbjct: 294 MMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKM 353

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV-FS 541
           V+EA+ L +E+  +        Y  ++ GLCKS +   A+++++ M   R +P + + ++
Sbjct: 354 VDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEM-HDRGQPSNIITYN 412

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
           +I+  +  +   ++A  L  K+ E
Sbjct: 413 SILDAICKNNHVDKAIVLLTKIKE 436



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 115/416 (27%), Positives = 210/416 (50%), Gaps = 2/416 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           D  T   +++  C +G++  A    D ++A+  Q+    +   LI GL R+   + A ++
Sbjct: 127 DAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYG-TLINGLCRVGETKAAVQL 185

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+ +      P+ + Y+ ++  +CK   +  A  L  EM      PDV+TY++++     
Sbjct: 186 LRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCV 245

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK K A+  +   +     P + T++ILI+  CK+  +  A  VL  M  +    D+VT
Sbjct: 246 VGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVT 305

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YNSL++  C   + + A  + N +  RG+ P+  +Y+ +++        D   K+ + M+
Sbjct: 306 YNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMH 365

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P V TYN L++GLCK G    A+   ++M  +    +I+TYN++L A+CK   ++
Sbjct: 366 CKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVD 425

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A+ LL  +      P + TY  LI+GL K G ++ A  ++  ++  G SP+  T+ +LI
Sbjct: 426 KAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLI 485

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            GFC     +E + +L ++   G       Y ++IH L +  + D A ++L  MI+
Sbjct: 486 NGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIA 541



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 103/355 (29%), Positives = 180/355 (50%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG  V  +    + I+ + C    + DA  L   M  +   PD     +LI G   + ++
Sbjct: 190 DGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKRISPDVVTYSSLISGFCVVGKL 249

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A  +   M+     P+  T+++++ G CK G++R A  +L  M     + DV+TYN++
Sbjct: 250 KYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAKNVLAVMMKKNVKLDVVTYNSL 309

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +       +  +A   +    ++G  P + +Y+I+I   CK   +  A+++ ++M  +  
Sbjct: 310 MDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGFCKIKMVDEAMKLFEEMHCKQI 369

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P++VTYNSLV+  CK G+   A+ +++ +  RG   N ITYN++L ++      D    
Sbjct: 370 FPNVVTYNSLVDGLCKSGRTSCALELVDEMHDRGQPSNIITYNSILDAICKNNHVDKAIV 429

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  + E    P +FTY +LINGLCK G +D A   F  ++ K   P+I TY +++   C
Sbjct: 430 LLTKIKEKGIQPDIFTYTVLINGLCKVGRLDDAQKVFEDLLVKGYSPNIYTYTSLINGFC 489

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
            +G  +E L +L  +  + C P  ITY  LI  L +K   +KA  L  +M+  G+
Sbjct: 490 NKGFFDEGLAMLSKMKDNGCIPNAITYEILIHSLFEKDENDKAEKLLREMIARGL 544



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 191/382 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ +   ++   C  G+   A +L+  +  +   P+      +I  + +   +  A  + 
Sbjct: 162 DQVSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLY 221

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV     PD +TY+ ++ G C  G+++ A+ L + M      P+V T++ ++      
Sbjct: 222 CEMVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKE 281

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK ++A       ++K     ++TY  L++  C    + +A  + + MA  G +PD+ +Y
Sbjct: 282 GKVREAKNVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSY 341

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + ++N  CK    D+A+ +   +  + + PN +TYN+L+  L   G      +++D M++
Sbjct: 342 SIMINGFCKIKMVDEAMKLFEEMHCKQIFPNVVTYNSLVDGLCKSGRTSCALELVDEMHD 401

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 + TYN +++ +CK   VD+AI    ++  K  QPDI TY  ++  LCK G L++
Sbjct: 402 RGQPSNIITYNSILDAICKNNHVDKAIVLLTKIKEKGIQPDIFTYTVLINGLCKVGRLDD 461

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A ++   L     SP + TY +LI+G   KG  ++ + +  +M +NG  P+ IT+  LI 
Sbjct: 462 AQKVFEDLLVKGYSPNIYTYTSLINGFCNKGFFDEGLAMLSKMKDNGCIPNAITYEILIH 521

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
                D+ ++A  LL+E+  RG
Sbjct: 522 SLFEKDENDKAEKLLREMIARG 543



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 86/327 (26%), Positives = 159/327 (48%), Gaps = 1/327 (0%)

Query: 249 LRKGCP-PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
           L K  P P  I +  ++  + K      A+ +   M   G  PD +T N L+N   + G 
Sbjct: 49  LHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCFSQLGH 108

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
              +  V   +L +G  P+++T+  L+  L  +G         D +          +Y  
Sbjct: 109 IKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQVSYGT 168

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LINGLC+ G    A+    ++  K  +P++V Y+T++ ++CK+ ++N+A  L   +    
Sbjct: 169 LINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCEMVSKR 228

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            SP ++TY++LI G    G ++ A+ L+ +M+ + I+P+  T   LI GFC+  +V EA 
Sbjct: 229 ISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGKVREAK 288

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           ++L  + K+  K+    Y  ++ G C  K+V+ A  +  +M      PD   +S ++   
Sbjct: 289 NVLAVMMKKNVKLDVVTYNSLMDGYCLVKQVNKAKSLFNVMAQRGVTPDVWSYSIMINGF 348

Query: 548 ADDGMTEEAYKLWQKLIEWKVFEKGTT 574
               M +EA KL++++   ++F    T
Sbjct: 349 CKIKMVDEAMKLFEEMHCKQIFPNVVT 375



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 71/267 (26%), Positives = 122/267 (45%), Gaps = 36/267 (13%)

Query: 314 VINNLLSR------------------------------------GMEPNSITYNTLLHSL 337
           + N LL +                                    G++P+ IT N L++  
Sbjct: 44  LFNRLLHKNNPIPPAIEFGKILGSLLKAKQYQTALSLSQQMEFNGIKPDFITCNLLMNCF 103

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G       +   + +  + P   T+ ILI GLC  G V +A+   +++V++  Q D 
Sbjct: 104 SQLGHIKFSFSVFAKILKKGYHPDAVTFTILIKGLCLKGEVHKALYFHDKVVAQGFQLDQ 163

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V+Y T++  LC+ G    A+QLL  ++G    P ++ Y+T+ID + K   +  A  LY +
Sbjct: 164 VSYGTLINGLCRVGETKAAVQLLRRVDGKLVRPNVVMYSTIIDSMCKDKLVNDAFDLYCE 223

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+   ISPD +T+ +LI GFC   +++ AVDL   +           + ++I G CK  K
Sbjct: 224 MVSKRISPDVVTYSSLISGFCVVGKLKYAVDLFNRMISDNINPNVYTFSILIDGFCKEGK 283

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIV 544
           V  A  VL +M+    K D   +++++
Sbjct: 284 VREAKNVLAVMMKKNVKLDVVTYNSLM 310


>gi|302794977|ref|XP_002979252.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
 gi|300153020|gb|EFJ19660.1| hypothetical protein SELMODRAFT_110457 [Selaginella moellendorffii]
          Length = 702

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 115/464 (24%), Positives = 237/464 (51%), Gaps = 6/464 (1%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           + + P  +++  T   +L  F    +  +A +L+         P+      +I G  +  
Sbjct: 66  AGNKPGFQHNAYTCAVLLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAG 125

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           ++++A ++L  M   G   D + ++ ++ GLC++G+I  A+     M    C P+VITYN
Sbjct: 126 QVDQAFELLDEMKERGVKMDVLLHSTLIQGLCRKGRIDEALEQFKSMG-EECSPNVITYN 184

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRK-----GCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           T++  +    +  +A+  + D  ++     GC P +I+Y+ +I+ +CK   + +A E   
Sbjct: 185 TVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFK 244

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
            M   GC+P++VTY+SL++  CK  +  + + ++ ++  +G   N I +N +LH+L    
Sbjct: 245 RMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKND 304

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             +   +  + + ++   P V TYN+ ++GLCK G VD A     +MV     PD++TY+
Sbjct: 305 EQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYS 364

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           +++   CK G +++A  +   +    C P  +T+ TL+ G ++     +A  ++  M+  
Sbjct: 365 SIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNA 424

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G  P   T+  L+   C AD VE A+++  ++ ++  +   + Y  +I  LC++++VD A
Sbjct: 425 GFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEA 484

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            + L++M +    P+  +   +V+ +   G  +EA  +   ++E
Sbjct: 485 KEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVE 528



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 223/450 (49%), Gaps = 8/450 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-----PDFHFCINLIRGLIRIDRIEKASK 173
           T N ++   C   ++ +A +L D M +R +      PD      +I  L +  R++KA +
Sbjct: 182 TYNTVVNGLCKANRIDEALELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYE 241

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
             + M   G  P+ +TY+ ++ GLCK  +    + LL  M   G   ++I +N +L  ++
Sbjct: 242 YFKRMRAVGCAPNVVTYSSLIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALW 301

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            N + ++A  F++  L+ G  P ++TY + +  +CK   +  A  +L +M     +PD++
Sbjct: 302 KNDEQEKACQFFERLLKSGKKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVI 361

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY+S+++  CK G+ D A  V   ++     P+ +T+ TLLH            ++ + M
Sbjct: 362 TYSSIIDGFCKAGRMDKADDVFTRMMVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDM 421

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
             A   P + TYN+L++ +C    V+ A+  +++M  K  QPD  TY  ++  LC+   +
Sbjct: 422 VNAGFIPGLQTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRV 481

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +EA + L ++   +  P     + L++ L K+G +++A  +   ++E G  P   T + L
Sbjct: 482 DEAKEFLDVMEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKIL 541

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           +       + E A  LL+  G   +    + Y L +  +CK+ K D A++V+E M+    
Sbjct: 542 VEELYLRKKWEAASKLLRSPGFVADA---ATYSLCVAEICKAGKPDEAVEVIEQMVLKGV 598

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +PD+  +  +++ +      E A   ++K+
Sbjct: 599 RPDEGTYVAVLRSLCGLDRVESAIAEFEKM 628



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 165/355 (46%), Gaps = 3/355 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  +   C  G++ +A +++  M      PD     ++I G  +  R++KA  V   M
Sbjct: 327 TYNVAVHGLCKAGRVDEAYRILLEMVESKVTPDVITYSSIIDGFCKAGRMDKADDVFTRM 386

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           ++   +P  +T+  ++ G  +  + R A  + ++M  +G  P + TYN ++  +      
Sbjct: 387 MVHECIPHPVTFMTLLHGFSEHKKSREAFRVHEDMVNAGFIPGLQTYNVLMDCVCGADSV 446

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A+  +    RK   P   TY  LI+ +C+   +  A E LD M  +   P+    ++L
Sbjct: 447 ESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDVMEADNVVPNGAICHAL 506

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V   CKQG+ D+A  V++N++  G +P   T+  L+  L  R  W+A  K+L        
Sbjct: 507 VEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKKWEAASKLL---RSPGF 563

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TY++ +  +CK G  D A+    QMV K  +PD  TY  VL +LC    +  A+ 
Sbjct: 564 VADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVAVLRSLCGLDRVESAIA 623

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
               +    C+P L+TY  LI         ++A  ++  M+  G +P   T RTL
Sbjct: 624 EFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAGFTPQAQTMRTL 678



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 82/276 (29%), Positives = 147/276 (53%), Gaps = 6/276 (2%)

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N   K  ++++A  ++   L     PN I Y T+++     G  D   ++LD M E  
Sbjct: 82  LLNAFVKAKRHEEAHRLLKEELEPLCFPNEIMYTTVINGFCKAGQVDQAFELLDEMKERG 141

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
               V  ++ LI GLC+ G +D A+  F  M  + C P+++TYNTV+  LCK   ++EAL
Sbjct: 142 VKMDVLLHSTLIQGLCRKGRIDEALEQFKSM-GEECSPNVITYNTVVNGLCKANRIDEAL 200

Query: 418 QLLHLLN-----GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +L   +         C P +I+Y+T+ID L K   ++KA   + +M   G +P+ +T+ +
Sbjct: 201 ELFDDMEKRYEASHGCEPDVISYSTVIDALCKAQRVDKAYEYFKRMRAVGCAPNVVTYSS 260

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C+ D+  E ++LL  + ++G  +    +  ++H L K+ + + A Q  E ++ S 
Sbjct: 261 LIDGLCKVDRPSECLELLLHMKEKGFGINIIDFNAMLHALWKNDEQEKACQFFERLLKSG 320

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            KP+   ++  V  +   G  +EAY++  +++E KV
Sbjct: 321 KKPNVVTYNVAVHGLCKAGRVDEAYRILLEMVESKV 356



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 66/262 (25%), Positives = 122/262 (46%), Gaps = 3/262 (1%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T N ++   C    +  A ++   M R+ + PD +    LI+ L R  R+++A + L +
Sbjct: 431 QTYNVLMDCVCGADSVESALEIYHKMKRKKRQPDCNTYAPLIQCLCRARRVDEAKEFLDV 490

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M     VP+    + +V  LCK+G++  A ++LD +   GC+P   T+  ++  ++   K
Sbjct: 491 MEADNVVPNGAICHALVEVLCKQGEVDEACSVLDNVVEVGCQPLGETFKILVEELYLRKK 550

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           ++ A    +     G      TY++ + ++CK      A+EV++ M ++G  PD  TY +
Sbjct: 551 WEAASKLLRS---PGFVADAATYSLCVAEICKAGKPDEAVEVIEQMVLKGVRPDEGTYVA 607

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++   C   + + A+     + SRG  P  +TY  L+    S    D   +I + M  A 
Sbjct: 608 VLRSLCGLDRVESAIAEFEKMASRGCAPGLVTYTLLIGEACSADMADEAFRIFEAMVAAG 667

Query: 358 HSPTVFTYNILINGLCKYGLVD 379
            +P   T   L + L   G  D
Sbjct: 668 FTPQAQTMRTLSSCLRDAGYQD 689


>gi|413922833|gb|AFW62765.1| hypothetical protein ZEAMMB73_408366 [Zea mays]
          Length = 820

 Score =  205 bits (522), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 126/456 (27%), Positives = 211/456 (46%), Gaps = 13/456 (2%)

Query: 101 HDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIR 160
           H P  P+           T N +++  C R  L  A + + +M R    PD     +LI 
Sbjct: 122 HAPPAPTG---------ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLIL 172

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
           G  R  ++E A  +   M   G   D ++Y  ++ G C+ G+I  A+ L  EM+    +P
Sbjct: 173 GYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QP 228

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D+ T+  +++ + D G+ ++ +   +     G  P    Y  L++  C++     A ++L
Sbjct: 229 DMYTHAALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKIL 288

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           ++M   G  P +VT   +VN  C++G+   AV V  ++  +G EPN  TYN ++    + 
Sbjct: 289 NEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNA 348

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G       +LD M E    P V TYN+LI G C  G +  A      M       D  TY
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTY 408

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N ++ ALCK G ++EA  L   L      P  +T+NT+I+GL K G  + A      M+ 
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMIS 468

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G +PD  T+   I   C+    +E +  + E+ ++  K     Y +VI+ L   +   +
Sbjct: 469 AGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGL 528

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           A ++   M+S    PD   ++T V+   ++G  +EA
Sbjct: 529 ATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEA 564



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 198/407 (48%), Gaps = 4/407 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LIR L R   +  A + L +MV SG  PD  T+N ++ G C+  Q+  A  L  +M   G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRG 194

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              D ++Y  ++    + G+  +A+  +++  +    P + T+  L++ +C        +
Sbjct: 195 FSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRGEEGL 250

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L  M   G  P    Y +LV+  C++ K ++A  ++N +   G+ P  +T   ++++ 
Sbjct: 251 CMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAY 310

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      ++ + M      P V+TYN ++ G C  G V +A+   +QM     +PD+
Sbjct: 311 CREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDV 370

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTYN ++   C +G +  A +LL L+ G+  +    TYN LID L K G +++A  L+  
Sbjct: 371 VTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           +   GI P+ +T  T+I G C+A + + A   L+ +   G       Y   I  LCK+K 
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKG 490

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               +  ++ M+    KP    ++ ++ ++ ++     A ++W +++
Sbjct: 491 SQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMV 537



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 125/466 (26%), Positives = 211/466 (45%), Gaps = 10/466 (2%)

Query: 111 PF--VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           PF     D  +   +++ FC  G++ +A +L   M +    PD +    L++GL    R 
Sbjct: 191 PFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHAALVKGLCDAGRG 246

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E+   +LQ M   G  P T  Y  +V   C+  +   A  +L+EM  SG  P V+T   +
Sbjct: 247 EEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVTCTIV 306

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G+   A+  ++    KGC P + TY  +++  C    + +A+ +LD M   G 
Sbjct: 307 VNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMRECGV 366

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD+VTYN L+   C  G    A  ++  +   G+  +  TYN L+ +L   G  D    
Sbjct: 367 EPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACS 426

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + D +      P   T+N +INGLCK G  D A      M+S    PD  TY+  +  LC
Sbjct: 427 LFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFIENLC 486

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K     E L  +  +      P  + Y  +I+ L  +     A  ++GQM+  G SPD +
Sbjct: 487 KTKGSQEGLFFIDEMLQKDVKPSTVNYTIVINRLFNERNYGLATRIWGQMVSQGCSPDVV 546

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ T +  +C   +++EA +++ E+ K    +   AY  +I G     + D A+ +L+ M
Sbjct: 547 TYTTSVRAYCNEGRLDEAENVVTEMKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHM 606

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTE----EAYKLWQKLIEWKVFE 570
                 P+   F  +++ +    + E    +A  +W+ +    VFE
Sbjct: 607 TGVASMPNHFTFFILLRHLLQRRLAEHVPLKATSVWKTIELADVFE 652



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 126/498 (25%), Positives = 220/498 (44%), Gaps = 60/498 (12%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           +C   K  +A K+++ M     +P    C  ++    R  R+  A +V + M   G  P+
Sbjct: 275 WCREQKAEEAEKILNEMFDSGLMPCVVTCTIVVNAYCREGRMSGAVRVFESMRFKGCEPN 334

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TYN +V G C  G++  A+ALLD+M   G EPDV+TYN ++R    +G    A    +
Sbjct: 335 VWTYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLR 394

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
                G      TY +LI+ +CK   +  A  + D +   G  P+ VT+N+++N  CK G
Sbjct: 395 LMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAG 454

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTY 365
           K+D A   + N++S G  P++ TY+  + +L  ++G  + +   +D M +    P+   Y
Sbjct: 455 KFDVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGL-FFIDEMLQKDVKPSTVNY 513

Query: 366 NILINGLCK---YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            I+IN L     YGL  R    + QMVS+ C PD+VTY T + A C EG L+EA  ++  
Sbjct: 514 TIVINRLFNERNYGLATRI---WGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTE 570

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMV----------------------------- 453
           +         + YNTLIDG    G  ++A+                              
Sbjct: 571 MKKCRTIVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRL 630

Query: 454 ----------------------LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
                                 L+  M +N +     T+ +++ GF    +++E   L+ 
Sbjct: 631 AEHVPLKATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVS 690

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            + +    +    Y  +++  CK +    A  +L  MI   + P+   +  ++  +  +G
Sbjct: 691 LMKEENLPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEG 750

Query: 552 MTEEAYKLWQKLIEWKVF 569
             + A ++++    WK +
Sbjct: 751 QADRAKEIFRS-SRWKEY 767



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 118/455 (25%), Positives = 203/455 (44%), Gaps = 21/455 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+Q FC+ GK+  A  L+D M      PD      LIRG      I  A ++L++M
Sbjct: 337 TYNAIVQGFCNAGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLM 396

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G   D  TYN+++  LCK G++  A +L D +   G  P+ +T+NT++  +   GKF
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF 456

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F ++ +  G  P   TY+  IE +CK  G    +  +D+M  +   P  V Y  +
Sbjct: 457 DVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIV 516

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N    +  Y  A  +   ++S+G  P+ +TY T + +  + G  D  + ++  M +   
Sbjct: 517 INRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRT 576

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY--------------NTVL 404
                 YN LI+G    G  DRA+     M      P+  T+              +  L
Sbjct: 577 IVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPL 636

Query: 405 GA--LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
            A  + K   L +  +L  L+  +S      TY ++++G +++  +++   L   M E  
Sbjct: 637 KATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEEN 696

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +  ++  +  L+  FC+     +A  LL  +   G       Y+ ++ GL    + D A 
Sbjct: 697 LPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAK 756

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           ++     SSR+K  +T    IV KV  DG   + +
Sbjct: 757 EIFR---SSRWKEYNT--DEIVWKVIIDGFIRKGH 786



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 100/381 (26%), Positives = 168/381 (44%), Gaps = 39/381 (10%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P   TYN ++R +      + A  +    +R G  P   T+  LI   C+   +  A ++
Sbjct: 127 PTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHDL 186

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
              M   G S D V+Y +L+   C+ G+ D+A+     L     +P+  T+  L+  L  
Sbjct: 187 FCKMPFRGFSQDAVSYAALIEGFCEAGRIDEAL----ELFREMTQPDMYTHAALVKGLCD 242

Query: 340 RG-----------------------------CW------DAVDKILDIMNEASHSPTVFT 364
            G                              W      +  +KIL+ M ++   P V T
Sbjct: 243 AGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVVT 302

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
             I++N  C+ G +  A+  F  M  K C+P++ TYN ++   C  G + +A+ LL  + 
Sbjct: 303 CTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQMR 362

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P ++TYN LI G    G +  A  L   M  NG++ D  T+  LI   C+  +V+
Sbjct: 363 ECGVEPDVVTYNLLIRGQCIDGHIGSAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVD 422

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  L   +  RG +  +  +  VI+GLCK+ K D+A   LE MIS+ Y PD   +S  +
Sbjct: 423 EACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKFDVACTFLENMISAGYAPDTYTYSPFI 482

Query: 545 KKVADDGMTEEAYKLWQKLIE 565
           + +     ++E      ++++
Sbjct: 483 ENLCKTKGSQEGLFFIDEMLQ 503



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 96/420 (22%), Positives = 183/420 (43%), Gaps = 16/420 (3%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           +G  +  D+ T N ++   C  GK+ +A  L D +  R   P+      +I GL +  + 
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKAGKF 456

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A   L+ M+ +G  PDT TY+  +  LCK    +  +  +DEM     +P  + Y  +
Sbjct: 457 DVACTFLENMISAGYAPDTYTYSPFIENLCKTKGSQEGLFFIDEMLQKDVKPSTVNYTIV 516

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +F+   +  A   W   + +GC P ++TYT  +   C +  +  A  V+ +M     
Sbjct: 517 INRLFNERNYGLATRIWGQMVSQGCSPDVVTYTTSVRAYCNEGRLDEAENVVTEMKKCRT 576

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH-----------SL 337
             D + YN+L++     G+ D AV ++ ++      PN  T+  LL             L
Sbjct: 577 IVDAMAYNTLIDGHTSIGQTDRAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEHVPL 636

Query: 338 GSRGCWDAVD-----KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
            +   W  ++     ++ ++M + S   +  TY  ++ G  +   +D   +  + M  +N
Sbjct: 637 KATSVWKTIELADVFELFELMKKNSVPSSARTYLSILEGFSEERRLDEVTSLVSLMKEEN 696

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
              +   YN ++   CK  M ++A  LL  + G    P LI Y  L+ GL  +G  ++A 
Sbjct: 697 LPLNEDIYNALVNCFCKLRMYSDAWALLCSMIGHGFLPNLIFYQYLLSGLTAEGQADRAK 756

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            ++        + D+I  + +I GF R    +   D++  + +   K  +  Y ++   L
Sbjct: 757 EIFRSSRWKEYNTDEIVWKVIIDGFIRKGHADMCHDMISMLEQMKCKPSDETYAMLTEEL 816



 Score =  105 bits (261), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 63/271 (23%), Positives = 124/271 (45%), Gaps = 4/271 (1%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P   TYN+L+   C++     A   ++ ++  G  P++ T+N+L+         +    
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLEVAHD 185

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M     S    +Y  LI G C+ G +D A+  F +M     QPD+ T+  ++  LC
Sbjct: 186 LFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMT----QPDMYTHAALVKGLC 241

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G   E L +L  +      P    Y  L+D   ++   E+A  +  +M ++G+ P  +
Sbjct: 242 DAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDSGLMPCVV 301

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T   ++  +CR  ++  AV + + +  +G +     Y  ++ G C + KV  A+ +L+ M
Sbjct: 302 TCTIVVNAYCREGRMSGAVRVFESMRFKGCEPNVWTYNAIVQGFCNAGKVYKAMALLDQM 361

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                +PD   ++ +++    DG    A++L
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIGSAFRL 392



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 101/212 (47%), Gaps = 4/212 (1%)

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           +   A  +PT  TYN LI  LC+   +  A    + MV    +PD  T+N+++   C+  
Sbjct: 119 MYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQ 178

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L  A  L   +     S   ++Y  LI+G  + G +++A+ L+ +M +    PD  TH 
Sbjct: 179 QLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRIDEALELFREMTQ----PDMYTHA 234

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            L+ G C A + EE + +L+++ + G +    AY  ++   C+ +K + A ++L  M  S
Sbjct: 235 ALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAALVDLWCREQKAEEAEKILNEMFDS 294

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              P     + +V     +G    A ++++ +
Sbjct: 295 GLMPCVVTCTIVVNAYCREGRMSGAVRVFESM 326



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 53/202 (26%), Positives = 97/202 (48%), Gaps = 5/202 (2%)

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNC-QPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           +  L+    +Y L    +  F  M       P   TYN ++ ALC+   L  A + L L+
Sbjct: 96  FRSLLTHFSRYALTPLMLRLFAHMYRHAPPAPTGATYNALIRALCRRADLRHAQRYLSLM 155

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
             S   P   T+N+LI G  +   +E A  L+ +M   G S D +++  LI GFC A ++
Sbjct: 156 VRSGWRPDAFTFNSLILGYCRTQQLEVAHDLFCKMPFRGFSQDAVSYAALIEGFCEAGRI 215

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA++L +E+ +    M   A   ++ GLC + + +  + +L+ M    ++P    ++ +
Sbjct: 216 DEALELFREMTQ--PDMYTHA--ALVKGLCDAGRGEEGLCMLQKMKELGWRPTTRAYAAL 271

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           V     +   EEA K+  ++ +
Sbjct: 272 VDLWCREQKAEEAEKILNEMFD 293


>gi|356540349|ref|XP_003538652.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Glycine max]
          Length = 1024

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 139/495 (28%), Positives = 238/495 (48%), Gaps = 39/495 (7%)

Query: 102 DPSLPSSDGPFVENDEKTNNKIL-----------QNF----CSRGKLTDASKLIDIMARR 146
           +  LP SD   +E  EK  +++L            NF    C  GK   A ++I  M  +
Sbjct: 390 NEELPGSD--LLELAEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSK 447

Query: 147 NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
             +PD      +I  L    ++EKA  + + M  +G VP   TY +++   CK G I+ A
Sbjct: 448 GFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQA 507

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
               DEM    C P+V+TY +++       K   A   ++  L +G  P ++TYT LI+ 
Sbjct: 508 RNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDG 567

Query: 267 VCKQCGIARAIEV------------------LDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
            CK   I +A ++                  LDD   E  +P+I+TY +LV+  CK  + 
Sbjct: 568 HCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCE--TPNIITYGALVDGLCKANRV 625

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           ++A  +++ +   G EPN I Y+ L+      G  +   ++   M+E  + P ++TY+ L
Sbjct: 626 EEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSL 685

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN L K   +D  +   ++M+  +C P++V Y  ++  LCK G   EA +L+  +    C
Sbjct: 686 INSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGC 745

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P +ITY  +IDG  K G +E+ + LY  M   G +P+ IT+R LI   C    ++EA  
Sbjct: 746 YPNVITYTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHR 805

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           LL E+ +       S+YR +I G   +++   +I +L+ +  +   P ++++  ++    
Sbjct: 806 LLDEMKQTYWPRHISSYRKIIEGF--NREFITSIGLLDELSENESVPVESLYRILIDNFI 863

Query: 549 DDGMTEEAYKLWQKL 563
             G  E A  L +++
Sbjct: 864 KAGRLEGALNLLEEI 878



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/509 (24%), Positives = 231/509 (45%), Gaps = 60/509 (11%)

Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
           + C  G+  DA  L++   +   +PD  F   ++ GL      ++A  +L  M     +P
Sbjct: 249 SLCKAGRCGDALSLLE---KEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIP 305

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + +TY +++ G   +GQ+     +L  M   GC P+   +N+++     +  +  A   +
Sbjct: 306 NVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLF 365

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIA------RAIEVLDDMAIEGCSPDIVTYNSLV 299
           K  ++ GC P  + Y I I  +C    +        A +   +M   G   + V  ++  
Sbjct: 366 KKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGVVLNKVNVSNFA 425

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C  GK+D A  +I  ++S+G  P+  TY+ ++  L      +    + + M +    
Sbjct: 426 RCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIV 485

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL------------ 407
           P+V+TY ILI+  CK GL+ +A N F++M+  NC P++VTY +++ A             
Sbjct: 486 PSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKL 545

Query: 408 -----------------------CKEGMLNEALQLLHLLNG---------------SSC- 428
                                  CK G +++A Q+   + G               + C 
Sbjct: 546 FEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCE 605

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P +ITY  L+DGL K   +E+A  L   M  NG  P+ I +  LI GFC+  ++E A +
Sbjct: 606 TPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQE 665

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           +  ++ +RG       Y  +I+ L K K++D+ ++VL  M+ +   P+  +++ ++  + 
Sbjct: 666 VFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLC 725

Query: 549 DDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
             G TEEAY+L  K+ E   +    T  A
Sbjct: 726 KVGKTEEAYRLMLKMEEVGCYPNVITYTA 754



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 219/475 (46%), Gaps = 60/475 (12%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ +FC  G +  A    D M R N  P+     +LI   ++  ++  A+K+ ++M++ G
Sbjct: 494 LIDSFCKAGLIQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEG 553

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TY  ++ G CK GQI  A  +   M     + D+ + +  +    D+   +   
Sbjct: 554 SKPNVVTYTALIDGHCKAGQIDKACQIYARM-----QGDIESSDIDMYFKLDDNDCET-- 606

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                       P +ITY  L++ +CK   +  A E+LD M++ GC P+ + Y++L++  
Sbjct: 607 ------------PNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQIVYDALIDGF 654

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK GK ++A  V   +  RG  PN  TY++L++SL      D V K+L  M E S +P V
Sbjct: 655 CKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSKMLENSCTPNV 714

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y  +I+GLCK G  + A     +M    C P+++TY  ++    K G + + L+L   
Sbjct: 715 VIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGKIEQCLELYRD 774

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM----------------------- 459
           +    C+P  ITY  LI+     G +++A  L  +M                        
Sbjct: 775 MCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRKIIEGFNREFI 834

Query: 460 ----------ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR-----GNKMRNSA 504
                     EN   P +  +R LI  F +A ++E A++LL+EI         NK     
Sbjct: 835 TSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSLAVANKY---L 891

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           Y  +I  L  + KVD A ++   MI+    P+ + F  ++K +   G  +EA +L
Sbjct: 892 YTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEALQL 946



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 123/479 (25%), Positives = 232/479 (48%), Gaps = 20/479 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T +K++   C   K+  A  L + M +   +P  +    LI    +   I++A    
Sbjct: 452 DDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWF 511

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+     P+ +TY  ++    K  ++  A  L + M + G +P+V+TY  ++      
Sbjct: 512 DEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKA 571

Query: 236 GKFKQAIGFWK-----------DQLRK----GCP-PYLITYTILIEQVCKQCGIARAIEV 279
           G+  +A   +            D   K     C  P +ITY  L++ +CK   +  A E+
Sbjct: 572 GQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHEL 631

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           LD M++ GC P+ + Y++L++  CK GK ++A  V   +  RG  PN  TY++L++SL  
Sbjct: 632 LDTMSVNGCEPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFK 691

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
               D V K+L  M E S +P V  Y  +I+GLCK G  + A     +M    C P+++T
Sbjct: 692 EKRLDLVLKVLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVIT 751

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  ++    K G + + L+L   +    C+P  ITY  LI+     G +++A  L  +M 
Sbjct: 752 YTAMIDGFGKIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMK 811

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           +        ++R +I GF R  +   ++ LL E+ +  +    S YR++I    K+ +++
Sbjct: 812 QTYWPRHISSYRKIIEGFNR--EFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLE 869

Query: 520 MAIQVLELMISSR--YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
            A+ +LE + SS      +  +++++++ ++     ++A++L+  +I   V  + +T +
Sbjct: 870 GALNLLEEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFV 928



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 114/426 (26%), Positives = 187/426 (43%), Gaps = 51/426 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +    K+ DA+KL ++M      P+      LI G  +  +I+KA ++   M
Sbjct: 525 TYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIYARM 584

Query: 179 ---VMSGGV-------------PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
              + S  +             P+ ITY  +V GLCK  ++  A  LLD MSV+GCEP+ 
Sbjct: 585 QGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKANRVEEAHELLDTMSVNGCEPNQ 644

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           I Y+ ++      GK + A   +     +G  P L TY+ LI  + K+  +   ++VL  
Sbjct: 645 IVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLKVLSK 704

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M    C+P++V Y  +++  CK GK ++A  ++  +   G  PN ITY  ++   G  G 
Sbjct: 705 MLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFGKIGK 764

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            +   ++   M     +P   TY +LIN  C  GL+D A    ++M        I +Y  
Sbjct: 765 IEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHISSYRK 824

Query: 403 VLGALCKE-----GMLNEALQ-------------------------LLHLLNGSSCSPCL 432
           ++    +E     G+L+E  +                          L+LL   S SP L
Sbjct: 825 IIEGFNREFITSIGLLDELSENESVPVESLYRILIDNFIKAGRLEGALNLLEEISSSPSL 884

Query: 433 IT-----YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
                  Y +LI+ L+    ++KA  LY  M+   + P+  T   LI G  R  + +EA+
Sbjct: 885 AVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLTRVGKWQEAL 944

Query: 488 DLLKEI 493
            L   I
Sbjct: 945 QLSDSI 950



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 89/331 (26%), Positives = 156/331 (47%), Gaps = 12/331 (3%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E ++   + ++  FC  GKL +A ++   M+ R   P+ +   +LI  L +  R++   K
Sbjct: 641 EPNQIVYDALIDGFCKTGKLENAQEVFVKMSERGYCPNLYTYSSLINSLFKEKRLDLVLK 700

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL  M+ +   P+ + Y  M+ GLCK G+   A  L+ +M   GC P+VITY  ++    
Sbjct: 701 VLSKMLENSCTPNVVIYTDMIDGLCKVGKTEEAYRLMLKMEEVGCYPNVITYTAMIDGFG 760

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK +Q +  ++D   KGC P  ITY +LI   C    +  A  +LD+M        I 
Sbjct: 761 KIGKIEQCLELYRDMCSKGCAPNFITYRVLINHCCSTGLLDEAHRLLDEMKQTYWPRHIS 820

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +Y  ++    ++  +  ++ +++ L      P    Y  L+ +    G    ++  L+++
Sbjct: 821 SYRKIIEGFNRE--FITSIGLLDELSENESVPVESLYRILIDNFIKAG---RLEGALNLL 875

Query: 354 NEASHSPTV-----FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
            E S SP++     + Y  LI  L     VD+A   +  M++KN  P++ T+  ++  L 
Sbjct: 876 EEISSSPSLAVANKYLYTSLIESLSHASKVDKAFELYASMINKNVVPELSTFVHLIKGLT 935

Query: 409 KEGMLNEALQLLHLLNGSSCSPC--LITYNT 437
           + G   EALQL   +    C  C   + Y T
Sbjct: 936 RVGKWQEALQLSDSICQMVCHVCSNFVNYKT 966



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 103/428 (24%), Positives = 183/428 (42%), Gaps = 60/428 (14%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSG---------------CE-------------- 219
           TYN ++    +  ++ +A  +  EMS SG               C+              
Sbjct: 207 TYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFAYSLCKAGRCGDALSLLEKE 266

Query: 220 ---PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
              PD + YN ++  + +   F++A+          C P ++TY IL+     +  + R 
Sbjct: 267 EFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRC 326

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +L  M  EGC P+   +NSLV+  CK   Y  A  +   ++  G +P  + YN  + S
Sbjct: 327 KRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGS 386

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILING---------LCKYGLVDRAINSFNQ 387
           + S       D +L++  +A     +    +++N          LC  G  D+A     +
Sbjct: 387 ICSNEELPGSD-LLELAEKAYSE--MLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICE 443

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M+SK   PD  TY+ V+G LC    + +A  L   +  +   P + TY  LID   K G 
Sbjct: 444 MMSKGFVPDDSTYSKVIGFLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGL 503

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +++A   + +M+ +  +P+ +T+ +LI  + +A +V +A  L + +   G+K     Y  
Sbjct: 504 IQQARNWFDEMLRDNCTPNVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTA 563

Query: 508 VIHGLCKSKKVDMAIQVLELM--------ISSRYKPDDT--------VFSTIVKKVADDG 551
           +I G CK+ ++D A Q+   M        I   +K DD          +  +V  +    
Sbjct: 564 LIDGHCKAGQIDKACQIYARMQGDIESSDIDMYFKLDDNDCETPNIITYGALVDGLCKAN 623

Query: 552 MTEEAYKL 559
             EEA++L
Sbjct: 624 RVEEAHEL 631



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 98/423 (23%), Positives = 172/423 (40%), Gaps = 62/423 (14%)

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI-------- 242
           N ++   C+ G    A+  L  +   G +    TYN +++      K   A         
Sbjct: 174 NFLIQKCCRNGMWNVALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSN 233

Query: 243 -GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
            GF  D    GC  Y +            C   R  + L  +  E   PD V YN +V+ 
Sbjct: 234 SGFRMDGCTLGCFAYSL------------CKAGRCGDALSLLEKEEFVPDTVFYNRMVSG 281

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+   + +A+ +++ + S    PN +TY  LL     +G      +IL +M      P 
Sbjct: 282 LCEASLFQEAMDILDRMRSISCIPNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPN 341

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK------------ 409
              +N L++  CK      A   F +M+   CQP  + YN  +G++C             
Sbjct: 342 REMFNSLVHAYCKSRDYSYAYKLFKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLEL 401

Query: 410 -EGMLNEALQL---LHLLNGSSCSPCLI-------------------------TYNTLID 440
            E   +E L L   L+ +N S+ + CL                          TY+ +I 
Sbjct: 402 AEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDKAFEIICEMMSKGFVPDDSTYSKVIG 461

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
            L     +EKA +L+ +M +NGI P   T+  LI  FC+A  +++A +   E+ +     
Sbjct: 462 FLCDASKVEKAFLLFEEMKKNGIVPSVYTYTILIDSFCKAGLIQQARNWFDEMLRDNCTP 521

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  +IH   K++KV  A ++ E+M+    KP+   ++ ++      G  ++A +++
Sbjct: 522 NVVTYTSLIHAYLKARKVFDANKLFEMMLLEGSKPNVVTYTALIDGHCKAGQIDKACQIY 581

Query: 561 QKL 563
            ++
Sbjct: 582 ARM 584



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 61/290 (21%), Positives = 115/290 (39%), Gaps = 11/290 (3%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVL--VINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
           G S   V YN+L+   C     +D V    +  +     E      N L+      G W+
Sbjct: 128 GYSHTPVVYNALIELLCCNAVNNDRVSHKFLMQIRDDDRELLRKLLNFLIQKCCRNGMWN 187

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
              + L  + +  +  +  TYN LI    +   +D A     +M +   + D  T     
Sbjct: 188 VALEELGRLKDFGYKASPTTYNALIQVFLRADKLDTAFLVHREMSNSGFRMDGCTLGCFA 247

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
            +LCK G   +AL LL         P  + YN ++ GL +    ++AM +  +M      
Sbjct: 248 YSLCKAGRCGDALSLLE---KEEFVPDTVFYNRMVSGLCEASLFQEAMDILDRMRSISCI 304

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P+ +T+R L+ G     Q+     +L  +   G       +  ++H  CKS+    A ++
Sbjct: 305 PNVVTYRILLSGCLGKGQLGRCKRILSMMMTEGCYPNREMFNSLVHAYCKSRDYSYAYKL 364

Query: 525 LELMISSRYKPDDTVFSTIVKKVADD------GMTEEAYKLWQKLIEWKV 568
            + MI    +P   +++  +  +  +       + E A K + ++++  V
Sbjct: 365 FKKMIKCGCQPGYLLYNIFIGSICSNEELPGSDLLELAEKAYSEMLDLGV 414


>gi|308080398|ref|NP_001183938.1| PPR-814a [Zea mays]
 gi|223929924|gb|ACN24620.1| PPR-814a [Zea mays]
          Length = 814

 Score =  205 bits (521), Expect = 5e-50,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 231/478 (48%), Gaps = 37/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +L++ C +GK   A  L+ +MA    +  PD      +I G  +   + KA  + + MV 
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TY+ +V  LCK   +  A A L +M   G  P+  TYN ++      G++K+
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +K+  R+   P ++T+ +L+  +CK   I  A +V D MA++G +PD+ +YN ++N
Sbjct: 308 AVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +G   D   + + +L  G+ P   T+N L+ +  + G  D    I + M +    P
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP------------------------- 395
            V TY  +I  LC+ G +D A+  FNQM+ +   P                         
Sbjct: 428 NVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 487

Query: 396 ----------DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                     DIV +++++  LCK G + +A  +  L       P  + Y+ L+DG    
Sbjct: 488 SEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLV 547

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G MEKA+ ++  M+  GI P+D+ + TL+ G+C+  +++E + L +E+ ++G K     Y
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 607

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            ++I GL ++ +   A      M  S    +   +S +++ +  +   +EA  L+++L
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKEL 665



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 209/414 (50%), Gaps = 3/414 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-A 208
           P  H    L+    R  R E A      ++ +G   D I  N ++ G C+  +   A+  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALDI 168

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQ 266
           LL      GC PDV +Y+ +L+++ D GK  QA    +     G  C P ++ Y  +I+ 
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVIDG 228

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
             K+  + +A ++  +M   G  PD VTY+S+V+  CK    D A   +  ++++G+ PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           + TYN L++   S G W    ++   M   S  P V T+N+L+  LCKYG +  A + F+
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFD 348

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M  K   PD+ +YN +L     +G L +   L  L+ G   +P + T+N LI   A  G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCG 408

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            ++KAM+++ +M ++G+ P+ +T+ T+I   CR  ++++A++   ++  +G      AY 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            +I G C    +  A +++  ++++    D  +FS+I+  +   G   +A  ++
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQNIF 522



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 224/483 (46%), Gaps = 35/483 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++   C    +  A   +  M  +  +P+     NLI G     + ++A +V 
Sbjct: 253 DFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKEAVRVF 312

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M     +PD +T+NM++G LCK G+I+ A  + D M++ G  PDV +YN +L      
Sbjct: 313 KEMRRQSILPDVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 372

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G        +   L  G  P + T+ +LI+       + +A+ + ++M   G  P+++TY
Sbjct: 373 GCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTY 432

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW-DAVDKILDIMN 354
            +++   C+ GK DDA+   N ++ +G+ P+   Y+ L+    + G    A + I +IMN
Sbjct: 433 TTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMN 492

Query: 355 EASH----------------------------------SPTVFTYNILINGLCKYGLVDR 380
              H                                   PT   Y++L++G C  G +++
Sbjct: 493 NGMHLDIVLFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEK 552

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+  F+ MVS   +P+ V Y T++   CK G ++E L L   +      P  I YN +ID
Sbjct: 553 ALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIID 612

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL + G    A V + +M E+GI+ +  T+  ++ G  +    +EA+ L KE+     K+
Sbjct: 613 GLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKI 672

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
                  +I G+ ++++V+ A  +   +  S   P    +S ++  +  +G+ EEA  ++
Sbjct: 673 DIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMF 732

Query: 561 QKL 563
             +
Sbjct: 733 SSM 735



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 120/463 (25%), Positives = 219/463 (47%), Gaps = 3/463 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKV 174
           D  T N ++ + C  GK+ +A  + D MA + Q PD F + I ++ G      +   + +
Sbjct: 323 DVVTFNMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI-MLNGYATKGCLVDMTDL 381

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             +M+  G  P   T+N+++      G +  A+ + +EM   G +P+V+TY T++  +  
Sbjct: 382 FDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCR 441

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK   A+  +   + +G  P    Y  LI+  C    + +A E++ ++   G   DIV 
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVL 501

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           ++S++N  CK G+  DA  + +  ++ G+ P ++ Y+ L+      G  +   ++ D M 
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMV 561

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            A   P    Y  L+NG CK G +D  ++ F +M+ K  +P  + YN ++  L + G   
Sbjct: 562 SAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTV 621

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A    H +  S  +    TY+ ++ GL K  C ++A+ L+ ++    +  D IT  T+I
Sbjct: 622 PAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMI 681

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G  +  +VEEA DL   I + G       Y ++I  L K   V+ A  +   M ++  +
Sbjct: 682 AGMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV-FEKGTTLL 576
           PD  + + +V+++        A     K+ E     E  TT+L
Sbjct: 742 PDSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTML 784



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/391 (24%), Positives = 188/391 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++ + + G L  A  + + M      P+      +I  L RI +++ A +    M
Sbjct: 396 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPNVLTYTTVIAALCRIGKMDDAMEKFNQM 455

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD   Y+ ++ G C  G +  A  L+ E+  +G   D++ +++I+  +   G+ 
Sbjct: 456 IDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRV 515

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   +   +  G  P  + Y++L++  C    + +A+ V D M   G  P+ V Y +L
Sbjct: 516 MDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTL 575

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  CK G+ D+ + +   +L +G++P++I YN ++  L   G           M E+  
Sbjct: 576 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 635

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +    TY+I++ GL K    D AI  F ++ + N + DI+T NT++  + +   + EA  
Sbjct: 636 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 695

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   ++ S   PC++TY+ +I  L K+G +E+A  ++  M   G  PD      ++    
Sbjct: 696 LFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 755

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           + +++  A   L +I +R   + +    L++
Sbjct: 756 KKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786



 Score =  124 bits (311), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 84/338 (24%), Positives = 160/338 (47%), Gaps = 1/338 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D+   + ++Q FC+ G L  A +LI  +       D     ++I  L ++ R+  A 
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVLFSSIINNLCKLGRVMDAQ 519

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +  + V  G  P  + Y+M++ G C  G++  A+ + D M  +G EP+ + Y T++   
Sbjct: 520 NIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  + +  +++ L+KG  P  I Y I+I+ + +      A     +M   G + + 
Sbjct: 580 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 639

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY+ ++    K   +D+A+ +   L +  ++ + IT NT++  +      +    +   
Sbjct: 640 CTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFAS 699

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           ++ +   P V TY+I+I  L K GLV+ A + F+ M +  C+PD    N V+  L K+  
Sbjct: 700 ISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 759

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG-CME 449
           +  A   L  ++  + S   +T   L+D  + KG C E
Sbjct: 760 IVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 61/208 (29%), Positives = 106/208 (50%), Gaps = 3/208 (1%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SPT  TY IL++   +    + A+  F Q++    + DI+  N +L   C+    +EAL 
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 167

Query: 419 -LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI--SPDDITHRTLIW 475
            LLH      C P + +Y+ L+  L  +G   +A  L   M E G   SPD + + T+I 
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVID 227

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GF +   V +A DL KE+ +RG       Y  V+H LCK++ +D A   L  M++    P
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++  ++ ++   +  G  +EA ++++++
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEM 315



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           SP   TY  L+D   +    E A+  +GQ++  G+  D I    L+ GFC A + +EA+D
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDIIIANHLLKGFCEAKRTDEALD 167

Query: 489 -LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS--SRYKPDDTVFSTIVK 545
            LL    + G      +Y +++  LC   K   A  +L +M    +   PD   ++T++ 
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYNTVID 227

Query: 546 KVADDGMTEEAYKLWQKLIE 565
               +G   +A  L++++++
Sbjct: 228 GFFKEGDVNKACDLFKEMVQ 247


>gi|326533642|dbj|BAK05352.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 227/452 (50%), Gaps = 1/452 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N I+   C    +  A  ++  M      PD      +I G   + R+++A+
Sbjct: 296 VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAA 355

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+ + M   G +P+ +T N  +  LCK G+ + A    D M+  G +PD+ +Y T+L   
Sbjct: 356 KMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGY 415

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G F   IG +      G       +TILI    K+  +  A+ +  +M  +G SPD+
Sbjct: 416 ASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDV 475

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW-DAVDKILD 351
           VTY+++++   + G+  DA+   N +++RG++PN+  Y++++      G    A + + +
Sbjct: 476 VTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSE 535

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           ++N+    P +  ++ +IN LCK G V  A + F+       +P ++T+N+++   C  G
Sbjct: 536 MINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVG 595

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +++A ++L  +      P ++TYNTL+DG  K G +   + L+ +M   G+ P+ +T+ 
Sbjct: 596 KMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYG 655

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            ++ G  RA +   A     E+ + G  +  S Y +++ GLC++   D AI + + + + 
Sbjct: 656 IMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTM 715

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             K   T+ +T++  +      EEA +L+  +
Sbjct: 716 NVKFSITILNTMINAMYKVQRKEEAKELFATI 747



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 206/411 (50%), Gaps = 4/411 (0%)

Query: 157 NLIRGLIRIDRIEKASKVL-QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
            L++ L   +R E+A  VL   M   G VP+ ++Y++++  LC     + A+ LL  M+ 
Sbjct: 197 TLLKCLCYANRTEEAVNVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAK 256

Query: 216 SG--CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
            G  C PDV+ Y+T++   F+ G+  +A   + +  R+G  P ++TY ++I+ +CK   +
Sbjct: 257 QGGACSPDVVAYSTVIHGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAM 316

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            +A  VL  M  +G  PD VTY+ +++     G+  +A  +   +  RG+ PN +T N+ 
Sbjct: 317 DKAELVLRQMTTDGAQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSF 376

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           L SL   G      +  D M    H P +F+Y  L++G    G     I  FN M S   
Sbjct: 377 LASLCKHGRSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGI 436

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
             +   +  ++ A  K GM+++A+ +   +     SP ++TY+T+I   ++ G +  AM 
Sbjct: 437 AANCHVFTILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAME 496

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGL 512
            + QM+  GI P+   + ++I GFC    + +A +L+ E+  +G    +   +  VI+ L
Sbjct: 497 KFNQMVARGIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSL 556

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           CK  +V  A  + +L      +P    F++++      G  ++A+K+   +
Sbjct: 557 CKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAM 607



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 223/504 (44%), Gaps = 38/504 (7%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           ++DG   + D  T + ++  + + G+L +A+K+   M +R  IP+   C + +  L +  
Sbjct: 327 TTDG--AQPDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHG 384

Query: 167 RIEKASKVLQIMVMSGGVPDTITY-----------------------------------N 191
           R ++A++    M   G  PD  +Y                                    
Sbjct: 385 RSKEAAEFFDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFT 444

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           +++    KRG +  A+ +  EM   G  PDV+TY+T++ T    G+   A+  +   + +
Sbjct: 445 ILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVAR 504

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC-SPDIVTYNSLVNFSCKQGKYDD 310
           G  P    Y+ +I+  C   G+ +A E++ +M  +G   PDIV ++S++N  CK G+  D
Sbjct: 505 GIQPNTAVYSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMD 564

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  + +     G  P  IT+N+L+      G  D   KILD M      P + TYN L++
Sbjct: 565 AHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLD 624

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G  K G ++  +  F +M  K  +P+ VTY  +L  L + G    A +  H +  S  + 
Sbjct: 625 GYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTV 684

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            +  Y  ++ GL +  C ++A++L+ ++    +        T+I    +  + EEA +L 
Sbjct: 685 TVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELF 744

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
             I   G     S Y ++I  L K   V+ A  +   M  S   P   + + I++ + + 
Sbjct: 745 ATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEK 804

Query: 551 GMTEEAYKLWQKLIEWKVFEKGTT 574
           G   +A     K+   ++  + +T
Sbjct: 805 GEIAKAGNYLSKVDGKRILLEAST 828



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 103/417 (24%), Positives = 204/417 (48%), Gaps = 39/417 (9%)

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VP   TYN+++   C+  +    +AL   +  +G + D IT NT+L+ +    + ++A+
Sbjct: 153 AVPTFCTYNILMDCCCRARRPDLGLALFGCILRTGLKMDQITANTLLKCLCYANRTEEAV 212

Query: 243 GFWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLV 299
                ++ + GC P  ++Y+I+++ +C      RA+++L  MA +G  CSPD+V Y++++
Sbjct: 213 NVLLHRMSELGCVPNAVSYSIVLKALCDNSMSQRALDLLQMMAKQGGACSPDVVAYSTVI 272

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +    +G+   A  + + +  +G++P+ +TYN ++ +L      D  + +L  M      
Sbjct: 273 HGFFNEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTDGAQ 332

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   TY+ +I+G    G +  A   F +M  +   P+IVT N+ L +LCK G   EA + 
Sbjct: 333 PDTVTYSCMIHGYATLGRLKEAAKMFREMKKRGLIPNIVTCNSFLASLCKHGRSKEAAEF 392

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGC-------------------------------- 447
              +      P + +Y TL+ G A +GC                                
Sbjct: 393 FDSMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAK 452

Query: 448 ---MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              ++ AM+++ +M + G+SPD +T+ T+I  F R  ++ +A++   ++  RG +   + 
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAV 512

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRY-KPDDTVFSTIVKKVADDGMTEEAYKLW 560
           Y  +I G C    +  A +++  MI+    +PD   FS+++  +  DG   +A+ ++
Sbjct: 513 YSSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIF 569



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 115/427 (26%), Positives = 200/427 (46%), Gaps = 25/427 (5%)

Query: 95  TITKKSHDPSLPS---------SDGPFVE-----NDEKTN---------NKILQNFCSRG 131
           ++T K H P + S         S+G F +     N  K+N           ++  +  RG
Sbjct: 395 SMTAKGHKPDIFSYCTLLHGYASEGCFADMIGLFNSMKSNGIAANCHVFTILIHAYAKRG 454

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
            + DA  +   M ++   PD      +I    R+ R+  A +    MV  G  P+T  Y+
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISTFSRMGRLTDAMEKFNQMVARGIQPNTAVYS 514

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGC-EPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
            ++ G C  G +  A  L+ EM   G   PD++ +++++ ++  +G+   A   +     
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFSSVINSLCKDGRVMDAHDIFDLATD 574

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P +IT+  LI+  C    + +A ++LD M + G  PDIVTYN+L++   K G+ +D
Sbjct: 575 IGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEVVGVEPDIVTYNTLLDGYFKNGRIND 634

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
            + +   +  +G++PN++TY  +L  L   G   A  K    M E+  + TV  Y I++ 
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILG 694

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GLC+    D AI  F ++ + N +  I   NT++ A+ K     EA +L   ++ S   P
Sbjct: 695 GLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLP 754

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
              TY  +I  L K G +E A  ++  M ++GI P       +I       ++ +A + L
Sbjct: 755 NESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814

Query: 491 KEI-GKR 496
            ++ GKR
Sbjct: 815 SKVDGKR 821



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 137/300 (45%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++ + C  G++ DA  + D+     + P      +LI G   + +++KA K+L  M +
Sbjct: 550 SSVINSLCKDGRVMDAHDIFDLATDIGERPGVITFNSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TYN ++ G  K G+I   + L  EM   G +P+ +TY  +L  +F  G+   
Sbjct: 610 VGVEPDIVTYNTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVA 669

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + +  G    +  Y I++  +C+      AI +   +        I   N+++N
Sbjct: 670 ARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMIN 729

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K  + ++A  +   + + G+ PN  TY  ++ +L   G  +  + +   M ++   P
Sbjct: 730 AMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGGVEDANNMFSSMEKSGIVP 789

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
                N +I  L + G + +A N  +++  K    +  T + +L    ++G   E ++LL
Sbjct: 790 GSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYQEDIKLL 849


>gi|4038037|gb|AAC97219.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1107

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 211/449 (46%), Gaps = 1/449 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N +L  F   GK  D  +    M      P       +I  + +   +E A  + + 
Sbjct: 96  RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 155

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G VPDT+TYN M+ G  K G++   +   +EM    CEPDVITYN ++      GK
Sbjct: 156 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 215

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
               + F+++    G  P +++Y+ L++  CK+  + +AI+   DM   G  P+  TY S
Sbjct: 216 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 275

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++ +CK G   DA  + N +L  G+E N +TY  L+  L         +++   M+ A 
Sbjct: 276 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 335

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P + +YN LI+G  K   +DRA+   N++  +  +PD++ Y T +  LC    +  A 
Sbjct: 336 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 395

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +++ +         + Y TL+D   K G   + + L  +M E  I    +T   LI G 
Sbjct: 396 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 455

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           C+   V +AVD    I        N+A +  +I GLCK  +V+ A  + E M+     PD
Sbjct: 456 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 515

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            T +++++      G   EA  L  K+ E
Sbjct: 516 RTAYTSLMDGNFKQGNVLEALALRDKMAE 544



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 221/487 (45%), Gaps = 36/487 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G +  A  L + M  R  +PD     ++I G  ++ R++      + M
Sbjct: 132 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 191

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 PD ITYN ++   CK G++   +    EM  +G +P+V++Y+T++      G  
Sbjct: 192 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 251

Query: 239 KQAIGFWKDQLRKGCPPY-----------------------------------LITYTIL 263
           +QAI F+ D  R G  P                                    ++TYT L
Sbjct: 252 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 311

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+ +C    +  A E+   M   G  P++ +YN+L++   K    D A+ ++N L  RG+
Sbjct: 312 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 371

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           +P+ + Y T +  L S    +A   +++ M E         Y  L++   K G     ++
Sbjct: 372 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 431

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL-NGSSCSPCLITYNTLIDGL 442
             ++M   + +  +VT+  ++  LCK  ++++A+   + + N          +  +IDGL
Sbjct: 432 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 491

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K   +E A  L+ QM++ G+ PD   + +L+ G  +   V EA+ L  ++ + G K+  
Sbjct: 492 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 551

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            AY  ++ GL    ++  A   LE MI     PD+ +  +++KK  + G  +EA +L   
Sbjct: 552 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSY 611

Query: 563 LIEWKVF 569
           L++ ++ 
Sbjct: 612 LMKHQLL 618



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 202/454 (44%), Gaps = 38/454 (8%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +P F     L   LI +  +E+A +    M      P T + N ++    K G+      
Sbjct: 57  VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 116

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
              +M  +G  P V TYN ++  M   G  + A G +++   +G  P  +TY  +I+   
Sbjct: 117 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 176

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   +   +   ++M    C PD++TYN+L+N  CK GK    +     +   G++PN +
Sbjct: 177 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 236

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           +Y+TL+ +    G      K    M      P  +TY  LI+  CK G +  A    N+M
Sbjct: 237 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 296

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           +    + ++VTY  ++  LC    + EA +L   ++ +   P L +YN LI G  K   M
Sbjct: 297 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 356

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA---VDLLKEIGKRGNKMRNS-- 503
           ++A+ L  ++   GI PD + + T IWG C  +++E A   ++ +KE G + N +  +  
Sbjct: 357 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 416

Query: 504 ------------------------------AYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
                                          + ++I GLCK+K V  A+      IS+ +
Sbjct: 417 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN-RISNDF 475

Query: 534 --KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             + +  +F+ ++  +  D   E A  L++++++
Sbjct: 476 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 509



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 145/330 (43%), Gaps = 35/330 (10%)

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R  C P    +  L   +     +  AI+    M      P   + N L++   K GK D
Sbjct: 53  RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 112

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           D      +++  G  P   TYN ++  +   G  +A   + + M      P   TYN +I
Sbjct: 113 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 172

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +G  K G +D  +  F +M    C+PD++TYN ++   CK G L   L+    + G+   
Sbjct: 173 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 232

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI--------------- 474
           P +++Y+TL+D   K+G M++A+  Y  M   G+ P++ T+ +LI               
Sbjct: 233 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 292

Query: 475 ----------W----------GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
                     W          G C A++++EA +L  ++   G     ++Y  +IHG  K
Sbjct: 293 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 352

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +K +D A+++L  +     KPD  ++ T +
Sbjct: 353 AKNMDRALELLNELKGRGIKPDLLLYGTFI 382



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 64/312 (20%), Positives = 143/312 (45%), Gaps = 1/312 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +  T   ++   C   ++ +A +L   M     IP+      LI G ++   +++A 
Sbjct: 301 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 360

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  +   G  PD + Y   + GLC   +I +A  +++EM   G + + + Y T++   
Sbjct: 361 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 420

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPD 291
           F +G   + +    +         ++T+ +LI+ +CK   +++A++  + ++ + G   +
Sbjct: 421 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 480

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
              + ++++  CK  + + A  +   ++ +G+ P+   Y +L+     +G       + D
Sbjct: 481 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 540

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M E      +  Y  L+ GL     + +A +   +M+ +   PD V   +VL    + G
Sbjct: 541 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELG 600

Query: 412 MLNEALQLLHLL 423
            ++EA++L   L
Sbjct: 601 CIDEAVELQSYL 612


>gi|356498877|ref|XP_003518274.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g09900-like [Glycine max]
          Length = 395

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/380 (31%), Positives = 206/380 (54%), Gaps = 11/380 (2%)

Query: 194 VGGLCKRGQ--IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           +G    RG+  ++  + +LD    S C PDV+T   ++          QA+    + + K
Sbjct: 1   MGPYVDRGESKLKQGVVVLDRQLQSKCYPDVVTCTELIDAACKESGVGQAMKLLIEMMSK 60

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           GC P ++TY +LI+ +C +  +  AI  L ++       D+++Y  +++  C  GK+ DA
Sbjct: 61  GCKPNVVTYNVLIKGICNEGRLDEAIRFLKNLPSYSIQLDVISYTIILHSLCSGGKWMDA 120

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + ++ ++L  G  PN +T+NTL++ L  +G       +L++M +   +P   +YN LI G
Sbjct: 121 MKLLASMLRNGFSPNVVTFNTLINFLCLKGLLGKALNVLEMMPKHGCTPNFRSYNPLIEG 180

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
            C     DR I     MVS+ C  D VTYN +L ALCK+G +++A+++L+ L+ + CSP 
Sbjct: 181 FCNEKSADRTIEYSRIMVSRGCYLDTVTYNILLTALCKDGKVDDAIEILNQLSLNGCSPL 240

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           LITY  +IDGL K G     +VL+ ++    + P+ IT  ++  G  R  +V EA+   +
Sbjct: 241 LITY-IVIDGLLKVGKTVHVVVLFEEI--KALKPNLITFTSVEGGLSRKGKVHEAIQNFR 297

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            +   G  +R S    +I GLCK+++   AI  L  M+ +  KP +  ++ +VK +  +G
Sbjct: 298 FL--EGLGIRXS----IIMGLCKTQQTSRAIDFLAYMVENGCKPTEATYNILVKGITCEG 351

Query: 552 MTEEAYKLWQKLIEWKVFEK 571
           + EEA KLW +L    + +K
Sbjct: 352 LPEEASKLWSELXSKGLVKK 371



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 189/388 (48%), Gaps = 22/388 (5%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           GP+V+  E              KL     ++D   +    PD   C  LI    +   + 
Sbjct: 2   GPYVDRGE-------------SKLKQGVVVLDRQLQSKCYPDVVTCTELIDAACKESGVG 48

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A K+L  M+  G  P+ +TYN+++ G+C  G++  AI  L  +     + DVI+Y  IL
Sbjct: 49  QAMKLLIEMMSKGCKPNVVTYNVLIKGICNEGRLDEAIRFLKNLPSYSIQLDVISYTIIL 108

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
            ++   GK+  A+      LR G  P ++T+  LI  +C +  + +A+ VL+ M   GC+
Sbjct: 109 HSLCSGGKWMDAMKLLASMLRNGFSPNVVTFNTLINFLCLKGLLGKALNVLEMMPKHGCT 168

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P+  +YN L+   C +   D  +     ++SRG   +++TYN LL +L   G  D   +I
Sbjct: 169 PNFRSYNPLIEGFCNEKSADRTIEYSRIMVSRGCYLDTVTYNILLTALCKDGKVDDAIEI 228

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L+ ++    SP + TY I+I+GL K G     +  F ++  K  +P+++T+ +V G L +
Sbjct: 229 LNQLSLNGCSPLLITY-IVIDGLLKVGKTVHVVVLFEEI--KALKPNLITFTSVEGGLSR 285

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +G ++EA+Q    L G      L    ++I GL K     +A+     M+ENG  P + T
Sbjct: 286 KGKVHEAIQNFRFLEG------LGIRXSIIMGLCKTQQTSRAIDFLAYMVENGCKPTEAT 339

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +  L+ G       EEA  L  E+  +G
Sbjct: 340 YNILVKGITCEGLPEEASKLWSELXSKG 367



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 32/239 (13%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C +G L  A  ++++M +    P+F     LI G       ++  +  +IM
Sbjct: 138 TFNTLINFLCLKGLLGKALNVLEMMPKHGCTPNFRSYNPLIEGFCNEKSADRTIEYSRIM 197

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G   DT+TYN+++  LCK G++  AI +L+++S++GC P +ITY  ++  +   GK 
Sbjct: 198 VSRGCYLDTVTYNILLTALCKDGKVDDAIEILNQLSLNGCSPLLITY-IVIDGLLKVGKT 256

Query: 239 KQAIGFWKDQLRKGCPPYLITYTI-----------------------------LIEQVCK 269
              +  +++   K   P LIT+T                              +I  +CK
Sbjct: 257 VHVVVLFEEI--KALKPNLITFTSVEGGLSRKGKVHEAIQNFRFLEGLGIRXSIIMGLCK 314

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
               +RAI+ L  M   GC P   TYN LV     +G  ++A  + + L S+G+   S+
Sbjct: 315 TQQTSRAIDFLAYMVENGCKPTEATYNILVKGITCEGLPEEASKLWSELXSKGLVKKSL 373


>gi|413920484|gb|AFW60416.1| hypothetical protein ZEAMMB73_230014 [Zea mays]
          Length = 700

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 227/453 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N ++      GK +DA K+ D M     +P++     +I G ++   +E   ++ 
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 252

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+ +TYN+++ GLC+ G++     L+DEM+     PD  TY+ +   +   
Sbjct: 253 DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 312

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ +  +  + + L+KG      T +IL+  +CK   +A+A +VL+ +   G  P  V Y
Sbjct: 313 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 372

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  C+      A  +   + SR + P+ ITYN L++ L         + ++  M +
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 432

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P+V T+N LI+     G +++     + M  K  + D++++ +V+ A CK G + E
Sbjct: 433 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 492

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ +L  +     +P    YN++ID   + G  E+A +L  +M  +G+S   +T+  L+ 
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 552

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G CR+ Q++EA +L+  +  +G +    +Y  +I   C     D A+++L+ M     +P
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
               + T+V  +A  G   +   L+Q+++   V
Sbjct: 613 TLRTYHTLVSALASAGRVHDMECLYQQMLHKNV 645



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 204/424 (48%), Gaps = 37/424 (8%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD----------------- 151
           DGP  + +  T N +L   C  G++ +   L+D MA  +  PD                 
Sbjct: 258 DGP--KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 315

Query: 152 ------------------FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMM 193
                              + C  L+ GL +  ++ KA +VL+++V +G VP T+ YN +
Sbjct: 316 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTL 375

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
           + G C+   +R A  + ++M      PD ITYN ++  +       +A     +  + G 
Sbjct: 376 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 435

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
            P + T+  LI+       + +   VL DM  +G   D++++ S+V   CK GK  +AV 
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           ++++++ + + PN+  YN+++ +    G  +    +++ M  +  S ++ TYN+L+ GLC
Sbjct: 496 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLC 555

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           +   +D A      + ++  +PD+V+YNT++ A C +G  ++AL+LL  +N     P L 
Sbjct: 556 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 615

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TY+TL+  LA  G +     LY QM+   + P    +  ++  + R +   +   L KE+
Sbjct: 616 TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 675

Query: 494 GKRG 497
            ++G
Sbjct: 676 SEKG 679



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 222/492 (45%), Gaps = 72/492 (14%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +P    C  L+  L+ + R         ++V +G  PDT  +N +V      G +  A+A
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 209 LLDEM--SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           ++  M  S     PD  +YN ++  ++ +GK   A+  + + +  G  P  ITY  +I+ 
Sbjct: 179 MVRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDG 238

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
             K   +     + D M  +G  P+IVTYN L++  C+ G+ D+  ++++ + S  M P+
Sbjct: 239 HVKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPD 298

Query: 327 SITYNTLLHSLGSRG-------------------------------CWDA----VDKILD 351
             TY+ L   L   G                               C D      +++L+
Sbjct: 299 GFTYSILFDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLE 358

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           ++      PT   YN LING C+   +  A   F QM S++ +PD +TYN ++  LCK  
Sbjct: 359 MLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLE 418

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           M+ +A  L+  +  S   P + T+NTLID     G +EK   +   M + GI  D I+  
Sbjct: 419 MVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFG 478

Query: 472 TLIWGFCRADQVEEAVDLL-----KEIGKRGN-----------------------KMRNS 503
           +++  FC+  ++ EAV +L     K++                            KM+NS
Sbjct: 479 SVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNS 538

Query: 504 A-------YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                   Y L++ GLC+S ++D A +++  + +   +PD   ++TI+    + G T++A
Sbjct: 539 GVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKA 598

Query: 557 YKLWQKLIEWKV 568
            +L Q++ ++ +
Sbjct: 599 LELLQEMNKYGI 610



 Score =  151 bits (382), Expect = 9e-34,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 164/345 (47%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L   C  GK+  A ++++++     +P       LI G  ++  +  A  + + M    
Sbjct: 340 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 399

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD ITYN ++ GLCK   +  A  L+ EM  SG +P V T+NT++      G+ ++  
Sbjct: 400 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 459

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               D  +KG    +I++  +++  CK   I  A+ +LDDM  +  +P+   YNS+++  
Sbjct: 460 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 519

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            + G  + A L++  + + G+  + +TYN LL  L      D  ++++  +      P V
Sbjct: 520 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 579

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            +YN +I+  C  G  D+A+    +M     +P + TY+T++ AL   G +++   L   
Sbjct: 580 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 639

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           +   +  P    Y  ++D   +     K   L  +M E GI+ DD
Sbjct: 640 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 684



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 50/212 (23%), Positives = 101/212 (47%), Gaps = 2/212 (0%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P++ + N+L+  L   G       +F  +V+   +PD   +N V+ A    G L+ AL +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 420 LHLLNGSSCSPC--LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +  +  S  +P     +YN +I GL + G    A+ ++ +M++ G+ P+ IT+ T+I G 
Sbjct: 180 VRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGH 239

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +   +E    L  ++   G K     Y +++ GLC++ ++D    +++ M S    PD 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDG 299

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             +S +   +   G +     L+ + ++  V 
Sbjct: 300 FTYSILFDGLTRTGESRTMLSLFAESLKKGVM 331


>gi|255585035|ref|XP_002533226.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526958|gb|EEF29158.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 606

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 128/423 (30%), Positives = 213/423 (50%), Gaps = 7/423 (1%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRI---DRIEKASKVLQIMVMSGGVPDTITYNMM-- 193
           LI+ + R    P       +   +I+    +++ +A  ++  M      PD  +YN +  
Sbjct: 176 LINALVRYPSKPSVCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILD 235

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
           V  LC+ G+   +I  L+E+  SG  P  ITYNTI+      G+ ++A  F    + K  
Sbjct: 236 VLWLCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSF 295

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
            P L T  IL+  +C +  +  A+++ +    +G + D VTYN++++  CK+G++++A  
Sbjct: 296 KPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFD 355

Query: 314 VINNLLSRGMEPNSITYNTLLHSLG-SRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
           ++  +  + + P+  TYN +L +L  + G  +   +  + M E S  P +FT NIL+ GL
Sbjct: 356 LLAEMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGL 415

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCSPC 431
           C  G++D A+  FN  +SK    D VTYNT++  LCKEG   EA  LL  +   +   P 
Sbjct: 416 CTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPD 475

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
             TYNT+I G  ++G +EKA     +M+E    PD  T   L+ G CR   + +A+ L  
Sbjct: 476 QTTYNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFN 535

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
               +G  +    Y  +I GLCK  + + A  +L  M   +  PD   ++ I+  +AD G
Sbjct: 536 TWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAG 595

Query: 552 MTE 554
             E
Sbjct: 596 RME 598



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 126/436 (28%), Positives = 217/436 (49%), Gaps = 26/436 (5%)

Query: 159 IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK------------------- 199
           I   +  +R   A+++   M      P+ +T N ++  L +                   
Sbjct: 142 IGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPSVCLSKAIFTNVIK 201

Query: 200 ---RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF--DNGKFKQAIGFWKDQLRKGCP 254
              + ++  AI L+ +M    C PD  +YNTIL  ++   +GK  Q+I    + L  G  
Sbjct: 202 FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLWLCRSGKTDQSIDKLNELLESGLV 261

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P+ ITY  +I   C++  + +A +  + M  +   PD+ T N L+   C +G  D+A+ +
Sbjct: 262 PHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKL 321

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC- 373
            N  +S+G   +++TYNT++  L   G ++    +L  M E    P  +TYN ++  L  
Sbjct: 322 FNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALAD 381

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
             G V++A    N+MV K+ +PD+ T N +L  LC EGML+ AL+L +       +   +
Sbjct: 382 AEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV 441

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMME-NGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           TYNT+I GL K+G  E+A  L  +M E NG+ PD  T+ T+I G+CR  QVE+A     +
Sbjct: 442 TYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNK 501

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + ++  K       +++ GLC+   +  A+++    IS     D   ++TI+  +  +G 
Sbjct: 502 MVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGR 561

Query: 553 TEEAYKLWQKLIEWKV 568
            EEA+ L  ++ E K+
Sbjct: 562 FEEAFDLLAEMKEKKL 577



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 109/333 (32%), Positives = 174/333 (52%), Gaps = 2/333 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+  +C  G++  A +  + M  ++  PD   C  L+RGL     ++ A K+    
Sbjct: 266 TYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTW 325

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD-NGK 237
           +  G   D +TYN ++ GLCK G+   A  LL EM      PD  TYN IL  + D  G+
Sbjct: 326 ISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALADAEGQ 385

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A  F    + K   P L T  IL+  +C +  +  A+++ +    +G + D VTYN+
Sbjct: 386 VEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNT 445

Query: 298 LVNFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +++  CK+G++++A  ++  +  + G+ P+  TYNT++      G  +   +  + M E 
Sbjct: 446 IISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNKMVEK 505

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           S  P +FT NIL+ GLC+ G++ +A+  FN  +SK    D VTYNT++  LCKEG   EA
Sbjct: 506 SFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEA 565

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
             LL  +      P   TYN ++  LA  G ME
Sbjct: 566 FDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/375 (29%), Positives = 191/375 (50%), Gaps = 6/375 (1%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPD---FHFCINLIRGLIRIDRIEKASKVLQIMVMSGG 183
           F  + KL++A  LI  M   +  PD   ++  ++++  L R  + +++   L  ++ SG 
Sbjct: 202 FGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVL-WLCRSGKTDQSIDKLNELLESGL 260

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           VP  ITYN ++ G C+ GQ+  A    ++M     +PD+ T N +LR +   G    A+ 
Sbjct: 261 VPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALK 320

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS-LVNFS 302
            +   + KG     +TY  +I  +CK+     A ++L +M  +   PD  TYN+ L   +
Sbjct: 321 LFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKKLGPDCYTYNAILCALA 380

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
             +G+ + A    N ++ +  +P+  T N LL  L + G  D   K+ +       +   
Sbjct: 381 DAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDA 440

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            TYN +I+GLCK G  + A +   +M  KN   PD  TYNT++   C+EG + +A Q  +
Sbjct: 441 VTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRN 500

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +   S  P L T N L+ GL ++G + KA+ L+   +  G + D +T+ T+I G C+  
Sbjct: 501 KMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEG 560

Query: 482 QVEEAVDLLKEIGKR 496
           + EEA DLL E+ ++
Sbjct: 561 RFEEAFDLLAEMKEK 575



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 180/360 (50%), Gaps = 2/360 (0%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  GK   +   ++ +     +P       +I G  R  ++EKA +    MV     PD
Sbjct: 239 LCRSGKTDQSIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPD 298

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             T N+++ GLC  G + +A+ L +     G   D +TYNTI+  +   G+F++A     
Sbjct: 299 LFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLA 358

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCG-IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           +   K   P   TY  ++  +    G + +A +  + M  +   PD+ T N L+   C +
Sbjct: 359 EMEEKKLGPDCYTYNAILCALADAEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTE 418

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH-SPTVFT 364
           G  D+A+ + N  +S+G   +++TYNT++  L   G ++    +L  M E +   P   T
Sbjct: 419 GMLDNALKLFNTWISKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTT 478

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN +I G C+ G V++A    N+MV K+ +PD+ T N +L  LC+EGML +AL+L +   
Sbjct: 479 YNTIILGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWI 538

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
               +   +TYNT+I GL K+G  E+A  L  +M E  + PD  T+  ++     A ++E
Sbjct: 539 SKGKAIDAVTYNTIISGLCKEGRFEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRME 598



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 64/218 (29%), Positives = 116/218 (53%), Gaps = 1/218 (0%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           + G++  A +  + M  ++  PD   C  L+RGL     ++ A K+    +  G   D +
Sbjct: 382 AEGQVEKAFQFRNKMVEKSFKPDLFTCNILLRGLCTEGMLDNALKLFNTWISKGKAIDAV 441

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           TYN ++ GLCK G+   A  LL EM   +G  PD  TYNTI+      G+ ++A  F   
Sbjct: 442 TYNTIISGLCKEGRFEEAFDLLAEMEEKNGLVPDQTTYNTIILGYCREGQVEKAFQFRNK 501

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            + K   P L T  IL+  +C++  + +A+++ +    +G + D VTYN++++  CK+G+
Sbjct: 502 MVEKSFKPDLFTCNILLRGLCREGMLVKALKLFNTWISKGKAIDAVTYNTIISGLCKEGR 561

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +++A  ++  +  + + P+  TYN +L +L   G  +A
Sbjct: 562 FEEAFDLLAEMKEKKLGPDCYTYNAILCALADAGRMEA 599



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 50/199 (25%), Positives = 90/199 (45%), Gaps = 26/199 (13%)

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK-----K 445
           K  Q   V  +T +GA       + A Q+ + +      P L+T NTLI+ L +      
Sbjct: 129 KKVQSLRVILDTSIGAYVSCNRPHHAAQIFNRMKRLHLKPNLLTRNTLINALVRYPSKPS 188

Query: 446 GCMEKAMV-----------------LYGQMMENGISPDDITHRTL---IWGFCRADQVEE 485
            C+ KA+                  L G+M +    PD+ ++ T+   +W  CR+ + ++
Sbjct: 189 VCLSKAIFTNVIKFGVKNKLSEAIGLIGKMKDFSCFPDNASYNTILDVLW-LCRSGKTDQ 247

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           ++D L E+ + G       Y  +IHG C+  +V+ A Q    M+   +KPD    + +++
Sbjct: 248 SIDKLNELLESGLVPHQITYNTIIHGYCREGQVEKAFQFRNKMVEKSFKPDLFTCNILLR 307

Query: 546 KVADDGMTEEAYKLWQKLI 564
            +  +GM + A KL+   I
Sbjct: 308 GLCTEGMLDNALKLFNTWI 326


>gi|449449910|ref|XP_004142707.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Cucumis sativus]
          Length = 757

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/426 (29%), Positives = 218/426 (51%), Gaps = 12/426 (2%)

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
           F  +L+R   R    +++ KV  IM   G  P  +T+N ++  L KRG+   A  + DEM
Sbjct: 151 FFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEM 210

Query: 214 -SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
            S  G  PD  T+N ++R    NG        + D  R GC P ++TY  L++ +C+   
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270

Query: 273 IARAIEVLDDMAIEGC--SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           +  A  V+  M  +    +P++VTY +L+   C + + + A+ V   ++++G++ N+ITY
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330

Query: 331 NTLLHSLGSRGCWDAVDKILD-IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           NTL+  L     ++ +  IL+    + + SP   T+N L++  C  G +D A+  F +M 
Sbjct: 331 NTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMS 390

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-------LLNGSSCSPCLITYNTLIDGL 442
               QPD  TY+ ++ +LC+ G   +A  LL        LL+G  C P +  YN +   L
Sbjct: 391 ELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYL 450

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            + G  +KA   + Q+M  G + D  +++TLI G C+    E   +LL  + ++      
Sbjct: 451 CETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDF 509

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +I+GL    K  +A+Q LE M+ S ++P+ + F +I+ K+ + G T E+  L Q 
Sbjct: 510 ETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQL 569

Query: 563 LIEWKV 568
           +++  +
Sbjct: 570 MLDKNI 575



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 155/282 (54%), Gaps = 4/282 (1%)

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD-IM 353
           +NSL+    + G + +++ V   + S G+ P+ +T+N+LL  L  RG  +   K+ D ++
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +    +P  FT+NILI G C  G+VD     FN +    C+PD+VTYNT++  LC+ G +
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271

Query: 414 NEALQLLHLLNGSSC--SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             A  ++  +   S   +P ++TY TLI G   K  +EKA+ ++ +M+  G+  ++IT+ 
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMIS 530
           TLI G C A + E+  D+L+     G    ++  +  ++H  C +  +D A++V E M  
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSE 391

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
            + +PD   +S +V+ +   G  E+A  L  KL+E K+   G
Sbjct: 392 LKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSG 433



 Score =  139 bits (349), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 227/523 (43%), Gaps = 82/523 (15%)

Query: 92  RGLT-ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           RG T + KK +D  L +     V  D  T N +++ FC  G + D  ++ + ++R    P
Sbjct: 197 RGRTNMAKKVYDEMLSTYG---VTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEP 253

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIA 208
           D      L+ GL R  ++  A  V++ M        P+ +TY  ++ G C + +I  A+A
Sbjct: 254 DVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALA 313

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           + +EM   G + + ITYNT+++ + +  KF++     KD                     
Sbjct: 314 VFEEMVNQGLKANNITYNTLIKGLCEARKFEKI----KD--------------------- 348

Query: 269 KQCGIARAIEVLDDMAIEGC-SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                     +L+  A +G  SPD  T+N+L++  C  G  DDA+ V   +    ++P+S
Sbjct: 349 ----------ILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDS 398

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASH-------SPTVFTYNILINGLCKYGLVDR 380
            TY+ L+ SL   G ++  + +LD + E           P V  YN +   LC+ G   +
Sbjct: 399 ATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKK 458

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A  +F Q++ +  Q D  +Y T++   CKEG      +LL L+      P   TY +LI+
Sbjct: 459 AEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETYESLIN 517

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR---- 496
           GL        A+    +M+ +   P+  T  +++       +  E+  L++ +  +    
Sbjct: 518 GLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQ 577

Query: 497 -------------GNKMRNSAYRLV---------------IHGLCKSKKVDMAIQVLELM 528
                        G  M + A++LV               I  LC  +KV    ++L   
Sbjct: 578 NLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFS 637

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           + S    D  + +T++ ++ +     EA+ L+ KL+E  V ++
Sbjct: 638 LESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQ 680



 Score = 48.5 bits (114), Expect = 0.009,   Method: Compositional matrix adjust.
 Identities = 79/393 (20%), Positives = 146/393 (37%), Gaps = 48/393 (12%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI-------RGLIRI 165
           ++ D  T + ++++ C  G    A  L+D +  R  +     C  L+       + L   
Sbjct: 394 IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCET 453

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
            + +KA K  +  +M  G  D  +Y  ++ G CK G   S   LL  M      PD  TY
Sbjct: 454 GKTKKAEKAFR-QLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFLPDFETY 512

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
            +++  +    K                 P L                  A++ L+ M  
Sbjct: 513 ESLINGLLHMDK-----------------PLL------------------ALQSLEKMLR 537

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
               P+  T++S++    +QG+  ++  +I  +L + +  N       +  L   G  D 
Sbjct: 538 SSHRPNSSTFHSILAKLLEQGRTSESASLIQLMLDKNIRQNLSFSTGCVRLLFGAGMNDK 597

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             +++ ++    +S  +     LI  LC    V +        +  +   D+   NTV+ 
Sbjct: 598 AFQLVHLLYGKGYSVKM---EELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLCNTVIF 654

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM--MENGI 463
            LC+   L+EA  L + L        L   N L   L     +E+A  +  +M  +E G+
Sbjct: 655 QLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLEAGEKLEEAEFVSKRMEPVEMGV 714

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
                    L +      ++EEA  + K + +R
Sbjct: 715 HQQLSCQNQLKFSLKAGGKLEEAESVQKRMERR 747


>gi|108862162|gb|ABA95747.2| Cytochrome P450 family protein [Oryza sativa Japonica Group]
          Length = 1595

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 120/443 (27%), Positives = 215/443 (48%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N++L+    + +  DA KL D M  ++   D +    L+RGL    R+E+  K+++    
Sbjct: 947  NRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWG 1006

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            +G +P  + YN+++ G C+RG +   + LL EM  +G  P ++TY +++  +   G  ++
Sbjct: 1007 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEK 1066

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                + +  ++G  P +  Y  +I+ +C      +A+ +L  M   GC PDI+T+N+L+ 
Sbjct: 1067 IGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLIT 1126

Query: 301  FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              C +G    A   +   + R + PN ++Y  L+H    RG       +L  M    H+P
Sbjct: 1127 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTP 1186

Query: 361  TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             V T+  LI+GL   G V  A+    +M  +   PD+  YN ++  LCK+ ML  A  +L
Sbjct: 1187 DVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNIL 1246

Query: 421  HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              +   +  P    Y TLIDG  +   +  A  ++  M   G+ PD ++   +I G+C+ 
Sbjct: 1247 EEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQF 1306

Query: 481  DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
              + EA+  +  + K G       Y  VI G  K   ++ A++ L  MI  + KP+   +
Sbjct: 1307 GMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTY 1366

Query: 541  STIVKKVADDGMTEEAYKLWQKL 563
            S+++      G T+ A  L+  +
Sbjct: 1367 SSLINGYCKTGDTDSAEGLFANM 1389



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/424 (27%), Positives = 200/424 (47%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++  +C RG +     L+  M     +P      +LI  L +   +EK   +   M  
Sbjct: 1017 NVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRK 1076

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
             G  P+   YN ++  LC       A+ +L +M  SGC+PD+IT+NT++  +   G  ++
Sbjct: 1077 RGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRK 1136

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A  F ++ +R+   P  ++YT LI   C +  +  A ++L +M   G +PD+VT+ +L++
Sbjct: 1137 AEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIH 1196

Query: 301  FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                 GK  +A++V   +  R + P+   YN L+  L  +    A   IL+ M E +  P
Sbjct: 1197 GLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQP 1256

Query: 361  TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              F Y  LI+G  +   +  A   F  M  K   PDIV+ N ++   C+ GM++EA+  +
Sbjct: 1257 DEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCM 1316

Query: 421  HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              +    C P   TY T+I G AK+G +  A+     M++    P+ +T+ +LI G+C+ 
Sbjct: 1317 SNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKT 1376

Query: 481  DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
               + A  L   +           Y ++I  L K  KV  A    E M+ +   P+D   
Sbjct: 1377 GDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTL 1436

Query: 541  STIV 544
              +V
Sbjct: 1437 HYLV 1440



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 182/371 (49%), Gaps = 1/371 (0%)

Query: 175  LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMF 233
            LQ M ++G  P       +V      G +  A  + + +    G  P+V   N +L+ + 
Sbjct: 895  LQSMSLAGAAPTRACLGALVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLV 954

Query: 234  DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +  ++  A   + + L K       +  +L+  +C +  +   +++++     GC P +V
Sbjct: 955  EQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVV 1014

Query: 294  TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
             YN L++  C++G     +L++  + + G  P  +TY +L++ LG +G  + +  +   M
Sbjct: 1015 FYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEM 1074

Query: 354  NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
             +   SP V  YN +I+ LC      +A+    QM +  C PDI+T+NT++  LC EG +
Sbjct: 1075 RKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 1134

Query: 414  NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             +A   L        +P  ++Y  LI G   +G +  A  L  +MM  G +PD +T   L
Sbjct: 1135 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGAL 1194

Query: 474  IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
            I G   A +V EA+ + +++ +R      + Y ++I GLCK + +  A  +LE M+    
Sbjct: 1195 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNV 1254

Query: 534  KPDDTVFSTIV 544
            +PD+ V++T++
Sbjct: 1255 QPDEFVYATLI 1265



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 200/440 (45%), Gaps = 26/440 (5%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N ++   C  G +  A   +    RR   P+      LI G      +  AS +L  M
Sbjct: 1120 TFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLVEM 1179

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +  G  PD +T+  ++ GL   G++  A+ + ++M+     PDV  YN ++  +      
Sbjct: 1180 MGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKRML 1239

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
              A    ++ L K   P    Y  LI+   +   +  A ++ + M  +G  PDIV+ N++
Sbjct: 1240 PAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVCPDIVSCNAM 1299

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            +   C+ G   +A+L ++N+   G  P+  TY T++     +G  +   + L  M +   
Sbjct: 1300 IKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQGNLNGALRWLCDMIKRKC 1359

Query: 359  SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE------GM 412
             P V TY+ LING CK G  D A   F  M ++   P++VTY  ++G+L K+      G+
Sbjct: 1360 KPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTYTILIGSLFKKDKVLRAGL 1419

Query: 413  LNEALQLLH----------LLNG-SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
              E + L H          L+NG +SC+PC+I  N++    ++    +  +V++ +++ +
Sbjct: 1420 YFETMLLNHCSPNDVTLHYLVNGLTSCTPCVI--NSICCNTSEVHGKDALLVVFKKLVFD 1477

Query: 462  GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK---- 517
               P +  +  +I+  CR + + EA+D    + K+G       +  +++G C   K    
Sbjct: 1478 IGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPITFLSLLYGFCSVGKSVNW 1537

Query: 518  ---VDMAIQVLELMISSRYK 534
               +    Q  E  I  RYK
Sbjct: 1538 RTILPNEFQQEEFEIIFRYK 1557



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 102/430 (23%), Positives = 199/430 (46%), Gaps = 1/430 (0%)

Query: 123  ILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
            ++  +   G L  A+++ + +  +   +P+   C  L++ L+   R + A K+   M+  
Sbjct: 913  LVAAYADAGMLGKATEMCERVREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGK 972

Query: 182  GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
                D  +  ++V GLC   ++   + L++    +GC P V+ YN ++      G   + 
Sbjct: 973  DSGADNYSTCVLVRGLCLERRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRG 1032

Query: 242  IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
            +    +    G  P L+TY  LI  + K+  + +   +  +M   G SP++  YNS+++ 
Sbjct: 1033 LLLLGEMETNGFLPTLVTYGSLINWLGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDA 1092

Query: 302  SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             C       A++++  + + G +P+ IT+NTL+  L   G     +  L        +P 
Sbjct: 1093 LCNCRSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPN 1152

Query: 362  VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
              +Y  LI+G C  G +  A +   +M+ +   PD+VT+  ++  L   G ++EAL +  
Sbjct: 1153 QLSYTPLIHGFCMRGELMVASDLLVEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVRE 1212

Query: 422  LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
             +      P +  YN LI GL KK  +  A  +  +M+E  + PD+  + TLI GF R++
Sbjct: 1213 KMTERQVFPDVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSE 1272

Query: 482  QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
             + +A  + + +  +G      +   +I G C+   +  AI  +  M      PD+  ++
Sbjct: 1273 NLGDARKIFEFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYT 1332

Query: 542  TIVKKVADDG 551
            T++   A  G
Sbjct: 1333 TVISGYAKQG 1342



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 139/313 (44%), Gaps = 19/313 (6%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D    N ++   C +  L  A  +++ M  +N  PD      LI G IR + +  A K+ 
Sbjct: 1222 DVNIYNVLISGLCKKRMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 1281

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            + M   G  PD ++ N M+ G C+ G +  AI  +  M   GC PD  TY T++      
Sbjct: 1282 EFMEHKGVCPDIVSCNAMIKGYCQFGMMSEAILCMSNMRKVGCIPDEFTYTTVISGYAKQ 1341

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            G    A+ +  D +++ C P ++TY+ LI   CK      A  +  +M  E  SP++VTY
Sbjct: 1342 GNLNGALRWLCDMIKRKCKPNVVTYSSLINGYCKTGDTDSAEGLFANMQAEALSPNVVTY 1401

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV--------- 346
              L+    K+ K   A L    +L     PN +T + L++ L S  C   V         
Sbjct: 1402 TILIGSLFKKDKVLRAGLYFETMLLNHCSPNDVTLHYLVNGLTS--CTPCVINSICCNTS 1459

Query: 347  -----DKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
                 D +L +  +       P    YN +I  LC++ ++  A++  N+M  K   P+ +
Sbjct: 1460 EVHGKDALLVVFKKLVFDIGDPRNSAYNAIIFSLCRHNMLREALDFKNRMAKKGYVPNPI 1519

Query: 399  TYNTVLGALCKEG 411
            T+ ++L   C  G
Sbjct: 1520 TFLSLLYGFCSVG 1532



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 78/283 (27%), Positives = 134/283 (47%)

Query: 287  GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
            G  P++   N L+    +Q ++DDA  + + +L +    ++ +   L+  L      +  
Sbjct: 938  GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGKDSGADNYSTCVLVRGLCLERRVEEG 997

Query: 347  DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             K+++    A   P V  YN+LI+G C+ G + R +    +M +    P +VTY +++  
Sbjct: 998  LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMETNGFLPTLVTYGSLINW 1057

Query: 407  LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            L K+G L +   L   +     SP +  YN++ID L       +AMV+  QM  +G  PD
Sbjct: 1058 LGKKGDLEKIGSLFLEMRKRGFSPNVQIYNSVIDALCNCRSATQAMVILKQMFASGCDPD 1117

Query: 467  DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             IT  TLI G C    V +A   L+E  +R       +Y  +IHG C   ++ +A  +L 
Sbjct: 1118 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMVASDLLV 1177

Query: 527  LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             M+   + PD   F  ++  +   G   EA  + +K+ E +VF
Sbjct: 1178 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 1220


>gi|297743431|emb|CBI36298.3| unnamed protein product [Vitis vinifera]
          Length = 641

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 228/460 (49%), Gaps = 4/460 (0%)

Query: 80  SESHVLAVNKKLRGLTITKKSHDPSLPS-SDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           SE  V+  N ++  ++ T+++    + + SD   VE   +    +L+ +     +   + 
Sbjct: 111 SEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELYYFVLKTYTYFPDVIACNS 170

Query: 139 LIDIMAR--RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGG 196
           L++++ +  R +I     CI +++GL +  ++E+  K+++     G +P+ I YN ++ G
Sbjct: 171 LLNMLVKLGRIEIARKFTCI-MVKGLCKEGKLEEGRKLIEDRWGQGCIPNIIFYNTLIDG 229

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
            CK+G +  A  L  E+ + G  P V TY  I+      G FK       +   +G    
Sbjct: 230 YCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFKAIDRLLMEMNSRGLTVN 289

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           +  Y  +I+   K   I +A+E ++ M   GC PDIVTYN+L++ SC+ GK  +A  ++ 
Sbjct: 290 VQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLE 349

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
             L +G+ PN  +Y  L+H+   +G +D     L  M E  H P + TY  L++GL   G
Sbjct: 350 QALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAG 409

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            VD A+    +M+ +   PD   YN ++  LCK+  L  A  LL  +   S  P    Y 
Sbjct: 410 EVDVALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYA 469

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           TL+DG  + G +++A  L+   +E G++P  + +  +I G+C+   +++A+  +  + KR
Sbjct: 470 TLVDGFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKR 529

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
                   Y  VI G  K   +D A ++   M+  + KP+
Sbjct: 530 HLAPDEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN 569



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 150/334 (44%), Gaps = 8/334 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+      G +  A + I+ M      PD      LI G  R  ++ +A ++L+  + 
Sbjct: 294 NTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLISGSCRDGKVSEADQLLEQALG 353

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +P+  +Y  ++   CK+G    A   L EM+  G +PD++TY  ++  +   G+   
Sbjct: 354 KGLMPNKFSYTPLIHAYCKQGGYDRASNWLIEMTERGHKPDLVTYGALVHGLVVAGEVDV 413

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +  L +G  P    Y IL+  +CK+  +  A  +L +M  +   PD   Y +LV+
Sbjct: 414 ALTIREKMLERGVFPDAGIYNILMSGLCKKFKLPAAKLLLAEMLDQSVLPDAFVYATLVD 473

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              + G  D+A  +    + +GM P  + YN ++      G        ++ M +   +P
Sbjct: 474 GFIRNGNLDEARKLFELTIEKGMNPGIVGYNAMIKGYCKFGMMKDAMACINRMKKRHLAP 533

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             FTY+ +I+G  K   +D A   F +MV   C+P+      V+  L  +G+L     L 
Sbjct: 534 DEFTYSTVIDGYVKQHDLDGAQKMFREMVKMKCKPN------VMDGL--QGLLLIIPSLF 585

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
              N        I Y++++D    +G  E +++L
Sbjct: 586 AFANMECSELHCINYSSILDQYLPQGTSEASVIL 619



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 81/284 (28%), Positives = 126/284 (44%), Gaps = 23/284 (8%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDA----VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           PD++  NSL+N   K G+ + A     +++  L   G          L+     +GC   
Sbjct: 163 PDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEG---RKLIEDRWGQGCI-- 217

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
                         P +  YN LI+G CK G ++ A   F ++  K   P + TY  ++ 
Sbjct: 218 --------------PNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIIN 263

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             CK+G      +LL  +N    +  +  YNT+ID   K G + KA+     M+E G  P
Sbjct: 264 GFCKKGDFKAIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKP 323

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +T+ TLI G CR  +V EA  LL++   +G      +Y  +IH  CK    D A   L
Sbjct: 324 DIVTYNTLISGSCRDGKVSEADQLLEQALGKGLMPNKFSYTPLIHAYCKQGGYDRASNWL 383

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             M    +KPD   +  +V  +   G  + A  + +K++E  VF
Sbjct: 384 IEMTERGHKPDLVTYGALVHGLVVAGEVDVALTIREKMLERGVF 427



 Score =  105 bits (262), Expect = 7e-20,   Method: Compositional matrix adjust.
 Identities = 74/260 (28%), Positives = 118/260 (45%), Gaps = 21/260 (8%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N   Y++LL  L     +  ++ +L+ M     SPT    +I+I      GLV++A+  +
Sbjct: 93  NGFAYSSLLKLLARSRVFSEMEVVLENMRVEEMSPTREAMSIVIQAYSDSGLVEKALELY 152

Query: 386 NQMVSKNCQ-PDIVTYNTVLG--------------------ALCKEGMLNEALQLLHLLN 424
             ++      PD++  N++L                      LCKEG L E  +L+    
Sbjct: 153 YFVLKTYTYFPDVIACNSLLNMLVKLGRIEIARKFTCIMVKGLCKEGKLEEGRKLIEDRW 212

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
           G  C P +I YNTLIDG  KKG ME A  L+ ++   G  P   T+  +I GFC+    +
Sbjct: 213 GQGCIPNIIFYNTLIDGYCKKGDMEMANGLFIELKLKGFLPTVETYGAIINGFCKKGDFK 272

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
               LL E+  RG  +    Y  +I    K   +  A++ +E MI    KPD   ++T++
Sbjct: 273 AIDRLLMEMNSRGLTVNVQVYNTIIDARYKHGHIVKAVETIEGMIECGCKPDIVTYNTLI 332

Query: 545 KKVADDGMTEEAYKLWQKLI 564
                DG   EA +L ++ +
Sbjct: 333 SGSCRDGKVSEADQLLEQAL 352


>gi|297836911|ref|XP_002886337.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
 gi|297332178|gb|EFH62596.1| F1N19.15 [Arabidopsis lyrata subsp. lyrata]
          Length = 1059

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 232/479 (48%), Gaps = 4/479 (0%)

Query: 91  LRGLTITKKSH--DPSLPSSDG-PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN 147
           +R L +T K      + PSS G            K+   F    +  DA  L   M +  
Sbjct: 1   MRRLIVTAKGFLKKAAYPSSGGGASARAYSGYREKLRTGFLHSIRFEDALDLFLEMVQSQ 60

Query: 148 QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI 207
            +P       L+  +  + R E      Q M + G   D  ++ +++   C+  ++  A+
Sbjct: 61  PLPSVVDFTRLLTAIANLRRYETVIYFSQQMELFGISHDLYSFTILIHCFCRCSRLSLAL 120

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
           ++L +M   G +P ++T+ ++L       +   A       ++ G  P ++ Y  LI+ +
Sbjct: 121 SILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCL 180

Query: 268 CKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           CK   +  A+E+L++M  +G  + D+VTYN+L+   C  G++  A  ++ ++  R + P+
Sbjct: 181 CKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPD 240

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
             T+  L+ +   +G  D   ++   M ++S  P   TYN LINGLC +G +  A  +F+
Sbjct: 241 VFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFD 300

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M SK C P++VTYNT++   CK   + + ++L   +          TYNTLI G  + G
Sbjct: 301 LMASKGCFPNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVG 360

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +  A  ++  M+  G++PD ITH  L+ G C   ++  A+    ++      +   AY 
Sbjct: 361 KLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYN 420

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++IHGLCK+ KV+ A ++   +     KPD   ++ ++  +  +G   EA +L++++ E
Sbjct: 421 IMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKE 479



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 212/434 (48%)

Query: 132  KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
            K  DA  L   M +   IP       ++  + ++++ +    +   M   G   D  ++ 
Sbjct: 595  KFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKMENLGISHDLYSFT 654

Query: 192  MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            +++   C+  +   A+ALL +M   G +P ++T  ++L       +F++A+         
Sbjct: 655  ILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAEL 714

Query: 252  GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
            G  P ++ Y  +I  +CK   +  A+E+   M  +G   D VTYN+L++  C  G++ DA
Sbjct: 715  GLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDA 774

Query: 312  VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
              ++ +++ R ++PN I +  L+ +    G       +   M   S  P + TYN LING
Sbjct: 775  ARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLING 834

Query: 372  LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
             C  G +  A + F+ MVSK C PD+VTYNT++   CK   + + ++L   +        
Sbjct: 835  FCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGD 894

Query: 432  LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
              TYNTLI G  + G +  A  ++ +M++ G+ PD +T+  L+   C   ++E+A+ +++
Sbjct: 895  AFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVE 954

Query: 492  EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            ++ K    +    Y ++I G+C++ KV  A  +   +     K D   + T++  +  +G
Sbjct: 955  DLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNG 1014

Query: 552  MTEEAYKLWQKLIE 565
            +  EA KL  ++ E
Sbjct: 1015 LRREADKLCTRMKE 1028



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/388 (28%), Positives = 193/388 (49%)

Query: 158  LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
            LI    R  R   A  +L  M+  G  P  +T   ++ G C+  + + A++L+D M+  G
Sbjct: 656  LIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAVSLVDSMAELG 715

Query: 218  CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             EP+V+ YNT++  +  N     A+  +    +KG     +TY  LI  +C       A 
Sbjct: 716  LEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGLCNSGRWTDAA 775

Query: 278  EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
             +L DM      P+++ + +L++   K+G   +A  +   ++ R + PN +TYN+L++  
Sbjct: 776  RLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGF 835

Query: 338  GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              +G       + D+M      P V TYN LI G CK   V+  +  F +M  +    D 
Sbjct: 836  CIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDA 895

Query: 398  VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
             TYNT++   C+ G LN A ++ + +      P ++TYN L+D L   G +EKA+V+   
Sbjct: 896  FTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVED 955

Query: 458  MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
            + +N +  D IT+  +I G CR D+V+EA  L + + ++G K+   AY  +I GLC++  
Sbjct: 956  LQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGL 1015

Query: 518  VDMAIQVLELMISSRYKPDDTVFSTIVK 545
               A ++   M    + P + ++   ++
Sbjct: 1016 RREADKLCTRMKEDGFMPSERIYDETLR 1043



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/388 (28%), Positives = 197/388 (50%), Gaps = 6/388 (1%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            + +D  +   ++  FC   + + A  L+  M +    P      +L+ G  + +R ++A 
Sbjct: 646  ISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQEAV 705

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             ++  M   G  P+ + YN ++ GLCK   + +A+ +   M   G   D +TYNT++  +
Sbjct: 706  SLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLISGL 765

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             ++G++  A    +D +++   P +I +T LI+   K+  +  A  +  +M      P+I
Sbjct: 766  CNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVHPNI 825

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            +TYNSL+N  C QG+  DA  + + ++S+G  P+ +TYNTL+           V+  + +
Sbjct: 826  LTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKS---KRVEDGMKL 882

Query: 353  MNEASHSPTV---FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              E +H   V   FTYN LI+G C+ G ++ A   FN+MV     PDIVTYN +L  LC 
Sbjct: 883  FCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCN 942

Query: 410  EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
             G + +AL ++  L  +     +ITYN +I G+ +   +++A  L+  +   G+  D I 
Sbjct: 943  NGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWCLFRSLTRKGVKLDAIA 1002

Query: 470  HRTLIWGFCRADQVEEAVDLLKEIGKRG 497
            + T+I G CR     EA  L   + + G
Sbjct: 1003 YITMISGLCRNGLRREADKLCTRMKEDG 1030



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 117/387 (30%), Positives = 194/387 (50%), Gaps = 3/387 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  +   ++  FC   +L+ A  ++  M +    P      +L+ G    +RI  A 
Sbjct: 96  ISHDLYSFTILIHCFCRCSRLSLALSILGKMMKLGYDPSIVTFGSLLHGFCLRNRIHDAF 155

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRT 231
            ++  MV SG  P+ + YN ++  LCK G +  A+ LL+EM   G    D++TYNT+L  
Sbjct: 156 SLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEMEKKGRLAADLVTYNTLLTG 215

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  +G+++QA    +D  ++   P + T+T LI+   KQ  +  A E+   M      P+
Sbjct: 216 LCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGNLDEAQELYKQMLQSSIGPN 275

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKIL 350
            VTYNSL+N  C  G+   A    + + S+G  PN +TYNTL++    SR   D + K+ 
Sbjct: 276 TVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNTLINGFCKSRRVEDGM-KLF 334

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M         FTYN LI+G C+ G +  A + F+ MVS    PDI+T+  +L  LC  
Sbjct: 335 QRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVN 394

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G +  A+   + +        ++ YN +I GL K   +E+A  L+ ++   G+ PD  T+
Sbjct: 395 GEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTY 454

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRG 497
             +I G C+     EA +L + + + G
Sbjct: 455 TIMILGLCKNGPRREADELFRRMKEDG 481



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 102/349 (29%), Positives = 169/349 (48%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T   +L  FC   +  +A  L+D MA     P+      +I GL +   +  A ++   M
Sbjct: 687  TLGSLLNGFCQGNRFQEAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGM 746

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
               G V D +TYN ++ GLC  G+   A  LL +M     +P+VI +  ++ T    G  
Sbjct: 747  EKKGIVADAVTYNTLISGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNL 806

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             +A   +K+ +R+   P ++TY  LI   C Q  +  A  + D M  +GC PD+VTYN+L
Sbjct: 807  LEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTL 866

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            +   CK  + +D + +   +  +G+  ++ TYNTL+H     G  +   K+ + M +   
Sbjct: 867  ITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGV 926

Query: 359  SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
             P + TYNIL++ LC  G +++A+     +       DI+TYN ++  +C+   + EA  
Sbjct: 927  PPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAWC 986

Query: 419  LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            L   L         I Y T+I GL + G   +A  L  +M E+G  P +
Sbjct: 987  LFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSE 1035



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 165/346 (47%), Gaps = 1/346 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +L  FC R ++ DA  L+  M +    P+      LI  L +   +  A ++L  M
Sbjct: 137 TFGSLLHGFCLRNRIHDAFSLVASMVKSGYEPNVVVYNTLIDCLCKNGDVNIALELLNEM 196

Query: 179 VMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
              G +  D +TYN ++ GLC  G+ R A  +L +M+     PDV T+  ++      G 
Sbjct: 197 EKKGRLAADLVTYNTLLTGLCYSGEWRQAARILRDMTKRRINPDVFTFTALIDAFVKQGN 256

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A   +K  L+    P  +TY  LI  +C    +  A +  D MA +GC P++VTYN+
Sbjct: 257 LDEAQELYKQMLQSSIGPNTVTYNSLINGLCMHGRLYHAKKTFDLMASKGCFPNVVTYNT 316

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK  + +D + +   +   G+  ++ TYNTL+H     G       I   M    
Sbjct: 317 LINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYNTLIHGYCQVGKLRVAKDIFSWMVSCG 376

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +P + T+ IL++GLC  G +  A+  FN M S      IV YN ++  LCK   + EA 
Sbjct: 377 VTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSGEKYLGIVAYNIMIHGLCKADKVEEAW 436

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +L   L      P   TY  +I GL K G   +A  L+ +M E+GI
Sbjct: 437 ELFCRLPVEGVKPDARTYTIMILGLCKNGPRREADELFRRMKEDGI 482



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 97/374 (25%), Positives = 172/374 (45%), Gaps = 35/374 (9%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y   LR+     KF  A G + + L+    P ++ +T ++  + K       I +   M 
Sbjct: 583 YRERLRSELHCIKFDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKME 642

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             G S D+ ++  L++  C+  ++  A+ ++  ++  G +P+ +T  +LL+       + 
Sbjct: 643 NLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQ 702

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               ++D M E    P V  YN +INGLCK   ++ A+  F  M  K    D VTYNT++
Sbjct: 703 EAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLI 762

Query: 405 GALC-----------------------------------KEGMLNEALQLLHLLNGSSCS 429
             LC                                   KEG L EA  L   +   S  
Sbjct: 763 SGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSVH 822

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P ++TYN+LI+G   +G +  A  ++  M+  G  PD +T+ TLI GFC++ +VE+ + L
Sbjct: 823 PNILTYNSLINGFCIQGRLGDAKHMFDLMVSKGCFPDVVTYNTLITGFCKSKRVEDGMKL 882

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             E+  +G       Y  +IHG C++ K+++A +V   M+     PD   ++ ++  + +
Sbjct: 883 FCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQKVFNRMVDCGVPPDIVTYNILLDCLCN 942

Query: 550 DGMTEEAYKLWQKL 563
           +G  E+A  + + L
Sbjct: 943 NGKIEKALVMVEDL 956



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 69/244 (28%), Positives = 117/244 (47%)

Query: 123  ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            ++  F   G L +A  L   M RR+  P+     +LI G     R+  A  +  +MV  G
Sbjct: 796  LIDTFVKEGNLLEAKNLYKEMIRRSVHPNILTYNSLINGFCIQGRLGDAKHMFDLMVSKG 855

Query: 183  GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              PD +TYN ++ G CK  ++   + L  EM+  G   D  TYNT++      GK   A 
Sbjct: 856  CFPDVVTYNTLITGFCKSKRVEDGMKLFCEMTHQGLVGDAFTYNTLIHGYCQAGKLNVAQ 915

Query: 243  GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +   +  G PP ++TY IL++ +C    I +A+ +++D+       DI+TYN ++   
Sbjct: 916  KVFNRMVDCGVPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGM 975

Query: 303  CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            C+  K  +A  +  +L  +G++ ++I Y T++  L   G     DK+   M E    P+ 
Sbjct: 976  CRNDKVKEAWCLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSE 1035

Query: 363  FTYN 366
              Y+
Sbjct: 1036 RIYD 1039



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 112/539 (20%), Positives = 210/539 (38%), Gaps = 79/539 (14%)

Query: 97  TKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCI 156
            KK+ D  L +S G F   +  T N ++  FC   ++ D  KL   M R   + D     
Sbjct: 295 AKKTFD--LMASKGCF--PNVVTYNTLINGFCKSRRVEDGMKLFQRMYREGLVGDTFTYN 350

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT--------------------------- 189
            LI G  ++ ++  A  +   MV  G  PD IT                           
Sbjct: 351 TLIHGYCQVGKLRVAKDIFSWMVSCGVTPDIITHCILLHGLCVNGEIGSAMVKFNDMRSG 410

Query: 190 --------YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
                   YN+M+ GLCK  ++  A  L   + V G +PD  TY  ++  +  NG  ++A
Sbjct: 411 EKYLGIVAYNIMIHGLCKADKVEEAWELFCRLPVEGVKPDARTYTIMILGLCKNGPRREA 470

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI-------EVLDDMAIEGCSPDIVT 294
              ++     G         +       Q  +   I        +++   +     D   
Sbjct: 471 DELFRRMKEDGIICQAEDGHLGEHGTNNQVSLGTIIICPKRRRSIMESGDLYYYYSDTTL 530

Query: 295 YNSLVNF------SCKQGKYDDAVLVINNLLSRGMEPNSITYN----------------- 331
           ++SLV        S  +G     +L    LL RG  P S +++                 
Sbjct: 531 WSSLVGLIPIASSSSVKGFVRRHLL----LLERGNNPESRSFSGASHHHHHHHHHHYRER 586

Query: 332 --TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
             + LH +     +D    +   M ++   P++  +  ++  + K    D  I  F++M 
Sbjct: 587 LRSELHCIK----FDDAFGLFCEMLQSRPIPSIVDFTRVLTAIAKMNKFDIVIYLFHKME 642

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           +     D+ ++  ++   C+    + AL LL  +      P ++T  +L++G  +    +
Sbjct: 643 NLGISHDLYSFTILIHCFCRCSRFSLALALLGKMMKLGFQPSIVTLGSLLNGFCQGNRFQ 702

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A+ L   M E G+ P+ + + T+I G C+   +  A+++   + K+G       Y  +I
Sbjct: 703 EAVSLVDSMAELGLEPNVVIYNTVINGLCKNRDLNNALEIFYGMEKKGIVADAVTYNTLI 762

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            GLC S +   A ++L  M+  +  P+   F+ ++     +G   EA  L++++I   V
Sbjct: 763 SGLCNSGRWTDAARLLRDMVKRKIDPNVIFFTALIDTFVKEGNLLEAKNLYKEMIRRSV 821



 Score = 47.4 bits (111), Expect = 0.023,   Method: Compositional matrix adjust.
 Identities = 33/121 (27%), Positives = 55/121 (45%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            V  D  T N +L   C+ GK+  A  +++ + +     D      +I+G+ R D++++A 
Sbjct: 926  VPPDIVTYNILLDCLCNNGKIEKALVMVEDLQKNQMDVDIITYNIIIQGMCRNDKVKEAW 985

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             + + +   G   D I Y  M+ GLC+ G  R A  L   M   G  P    Y+  LR  
Sbjct: 986  CLFRSLTRKGVKLDAIAYITMISGLCRNGLRREADKLCTRMKEDGFMPSERIYDETLRDH 1045

Query: 233  F 233
            +
Sbjct: 1046 Y 1046


>gi|224131362|ref|XP_002328520.1| predicted protein [Populus trichocarpa]
 gi|222838235|gb|EEE76600.1| predicted protein [Populus trichocarpa]
          Length = 501

 Score =  205 bits (521), Expect = 6e-50,   Method: Compositional matrix adjust.
 Identities = 133/472 (28%), Positives = 236/472 (50%), Gaps = 20/472 (4%)

Query: 82  SHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           S + + +  L   T TKK   PSLP ++G FV N+   +N I         + DA     
Sbjct: 30  SFLFSNHHHLNTSTCTKK---PSLPQNNGGFVSNN---SNDI--------GIDDAMASFY 75

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTITYNMMVGGLC 198
            M   N  P F   + L + L  I + ++ S V+ +   M + G   +  T N+++  LC
Sbjct: 76  RMIHMNPRPSF---VELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLC 132

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           +   I  A+++L +M   G +PD +T+ T++  + + G+ K+A+  + +   +   P  +
Sbjct: 133 RLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTV 192

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           T+TIL++ +CK+  ++ A  V + M  +G  P+I TYN+L+N  C + + +DA  V   +
Sbjct: 193 TFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDASKVFEIM 252

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           + +G  P+  +Y+ L++        D    +L  M+E    P   TYN L+ GLC    +
Sbjct: 253 VGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQGLCHASSL 312

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A   F +M S    P++ TY+ +L  LCK G L EAL+LL  +      P ++ YN L
Sbjct: 313 LEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPDIVLYNIL 372

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I G+   G +E A  L+ ++  NGI P   T+  +I G  +    +EA  L +++   G 
Sbjct: 373 IQGMFIAGKLEVAKELFSKLFANGIRPSVRTYNIMIKGLLKEGLSDEAYKLFRKMEDDGF 432

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
              + +Y ++I G  +++    AIQ+++ M+  R+  D + F  ++   + D
Sbjct: 433 LPDSCSYNVIIQGFLQNQDPSTAIQLIDEMVGRRFSADSSTFKMLLDLESHD 484



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 147/328 (44%), Gaps = 35/328 (10%)

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
           GI  A+     M      P  V     +    K+ +Y   V + N +   G+  N  T N
Sbjct: 66  GIDDAMASFYRMIHMNPRPSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLN 125

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            L++SL           +L  M +    P   T+  LINGLC  G +  A+  FN+M  +
Sbjct: 126 ILINSLCRLSHIHFAVSVLSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGR 185

Query: 392 NCQPDIVTYNTVLGALCKEGM-----------------------------------LNEA 416
           +  P+ VT+  ++  LCK+GM                                   +N+A
Sbjct: 186 DAMPNTVTFTILVDVLCKKGMVSEARCVFETMTEKGVEPNIYTYNALMNGYCLRLEMNDA 245

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            ++  ++ G  C+P + +Y+ LI+G  K   +++A  L  QM E  + P+ +T+ TL+ G
Sbjct: 246 SKVFEIMVGKGCAPSVHSYSILINGYCKSRRIDEAKALLTQMSEKELIPNTVTYNTLMQG 305

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C A  + EA +L K++   G       Y +++ GLCK   ++ A+++L  M   + +PD
Sbjct: 306 LCHASSLLEAQELFKKMCSSGMLPNLRTYSILLDGLCKHGHLEEALKLLTSMQERKLEPD 365

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             +++ +++ +   G  E A +L+ KL 
Sbjct: 366 IVLYNILIQGMFIAGKLEVAKELFSKLF 393



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 34/139 (24%), Positives = 63/139 (45%)

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  +     +  +AKK      + L  QM   G++ +D T   LI   CR   +  AV +
Sbjct: 84  PSFVELGKFLGSIAKKKQYSTVVSLCNQMDLFGVAHNDYTLNILINSLCRLSHIHFAVSV 143

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L ++ K G +  +  +  +I+GLC   ++  A+++   M      P+   F+ +V  +  
Sbjct: 144 LSKMFKLGIQPDSVTFTTLINGLCNEGRIKEAVELFNEMAGRDAMPNTVTFTILVDVLCK 203

Query: 550 DGMTEEAYKLWQKLIEWKV 568
            GM  EA  +++ + E  V
Sbjct: 204 KGMVSEARCVFETMTEKGV 222


>gi|451798815|gb|AGF69111.1| PPR [Raphanus sativus]
          Length = 479

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 223/422 (52%), Gaps = 20/422 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   C   ++++A  L   M + N +        L+ GL R  R+ +A  +L  M
Sbjct: 52  TFNTLLHGLCVEDRVSEALDLFHQMCKPNVVT----FTTLMNGLCREGRVVEAVALLDRM 107

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDNGK 237
           V  G  P+ ITY  +V G+CK G   SA+ LL +M  +S  +PDV+ Y+ I+  ++ +G+
Sbjct: 108 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGR 167

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A   + +   KG  P ++TY+ +I   C     + A  +L +M +   SPD+VT++ 
Sbjct: 168 HTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSG 227

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-------CWDAVDK-I 349
           L+N   K+G  + A  ++  ++S G+ PN +T NTLL  L   G        + A+ K +
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287

Query: 350 LDIMNEASHS-----PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
           +DI  +A+H+     P V TYNILI+GL   G    A   + +M  +   PD VTY++++
Sbjct: 288 MDI--DATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMI 345

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LCK+  L+EA Q+   +   S SP ++T+NTLI G  K G ++  + L+ +M   GI 
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
            + IT+ TLI GF +   +  ++D+ +E+   G        R ++ GL   +++  A+ +
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKRALAM 465

Query: 525 LE 526
           LE
Sbjct: 466 LE 467



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 122/428 (28%), Positives = 212/428 (49%), Gaps = 16/428 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++ FCS  KL  A      + +    P       L+ GL   DR+ +A  +   M  
Sbjct: 19  NILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK 78

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P+ +T+  ++ GLC+ G++  A+ALLD M   G +P+ ITY TI+  M   G    
Sbjct: 79  ----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 134

Query: 241 AIGFW-KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           A+    K +      P ++ Y+ +I+ + K      A  +  +M  +G  PDIVTY+ ++
Sbjct: 135 ALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  C  GK+ +A  ++  +L R + P+ +T++ L+++L   G  ++   +L  M  +   
Sbjct: 195 NGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQM-----------VSKNCQPDIVTYNTVLGALC 408
           P V T N L++GLC  G +  A+  F  M                +PD+ TYN ++  L 
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
            EG   EA +L   +      P  +TY+++I+GL K+  +++A  ++  M     SP+ +
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T  TLI G+C+A  V++ ++L  E+G+RG       Y  +I G  K   ++ ++ + + M
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434

Query: 529 ISSRYKPD 536
           ISS   PD
Sbjct: 435 ISSGVYPD 442



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 196/392 (50%), Gaps = 26/392 (6%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D  ++N+++   C   ++  A++   +++  G  P ++T+NT+L  +    +  +A+   
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL--- 70

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            D   + C P ++T+T L+  +C++  +  A+ +LD M  +G  P+ +TY ++V+  CK 
Sbjct: 71  -DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 306 GKYDDAVLVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           G   D V  +N  L R ME      P+ + Y+ ++  L   G       +   M +    
Sbjct: 130 G---DTVSALN--LLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIF 184

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P + TY+ +ING C  G    A     +M+ +   PD+VT++ ++ AL KEG LN A  L
Sbjct: 185 PDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDL 244

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-----------NGISPDDI 468
           L  +  S   P ++T NTL+DGL   G ++ A+ ++  M +           NG+ PD  
Sbjct: 245 LQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQ 304

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  LI G     +  EA +L +E+  RG       Y  +I+GLCK  ++D A Q+ + M
Sbjct: 305 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM 364

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            S  + P+   F+T++      GM ++  +L+
Sbjct: 365 GSKSFSPNIVTFNTLITGYCKAGMVDDGLELF 396



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 152/317 (47%), Gaps = 11/317 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + I+      G+ TDA  L   M  +   PD      +I G     +  +A ++LQ M++
Sbjct: 156 SAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLV 215

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PD +T++ ++  L K G + SA  LL EM  SG  P+V+T NT+L  + D+GK K 
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKD 275

Query: 241 AIGFWKDQLRK-----------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           A+  +K   +            G  P + TY ILI  +  +     A E+ ++M   G  
Sbjct: 276 ALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 335

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD VTY+S++N  CKQ + D+A  + +++ S+   PN +T+NTL+      G  D   ++
Sbjct: 336 PDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M          TY  LI G  K G ++ +++ F +M+S    PD +T   +L  L  
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWS 455

Query: 410 EGMLNEALQLLHLLNGS 426
           +  L  AL +L  L  S
Sbjct: 456 KEELKRALAMLEELQMS 472



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 5/210 (2%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           PT+ T+N L++GLC    V  A++ F+QM    C+P++VT+ T++  LC+EG + EA+ L
Sbjct: 48  PTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 103

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NGISPDDITHRTLIWGFC 478
           L  +      P  ITY T++DG+ K G    A+ L  +M E + I PD + +  +I G  
Sbjct: 104 LDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLW 163

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +  +A +L  E+  +G       Y  +I+G C S K   A ++L+ M+  +  PD  
Sbjct: 164 KDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVV 223

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            FS ++  +  +G    A  L Q++I   V
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGV 253



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 5/175 (2%)

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           DI ++N ++   C    L  AL     L      P L+T+NTL+ GL  +  + +A+ L+
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            QM +    P+ +T  TL+ G CR  +V EAV LL  + + G +     Y  ++ G+CK 
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 516 KKVDMAIQVLELMIS-SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
                A+ +L  M   S  KPD  ++S I+  +  DG   +A  L+ ++ +  +F
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIF 184



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 5/137 (3%)

Query: 430 PC-LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           PC + ++N LI        +  A+  +G++ + G  P  +T  TL+ G C  D+V EA+D
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L  ++ K         +  +++GLC+  +V  A+ +L+ M+    +P+   + TIV  + 
Sbjct: 72  LFHQMCKP----NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 549 DDGMTEEAYKLWQKLIE 565
             G T  A  L +K+ E
Sbjct: 128 KMGDTVSALNLLRKMEE 144


>gi|326510071|dbj|BAJ87252.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 825

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 130/464 (28%), Positives = 228/464 (49%), Gaps = 8/464 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  +   +++  C+ G++ DA ++   M+R    P  H    L+ GL ++ R+ +A  +L
Sbjct: 160 DRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALL 219

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G VP+ +TYN ++GGLC+ G+      LL++M +    PD  TY  ++  +  +
Sbjct: 220 GEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKH 279

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK         + + KG    ++TY  LI   CK   +  A++VL  M     +P + T+
Sbjct: 280 GKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTF 339

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N +++  C  GK   A+  +  +   G+ PN++T+N+L+    S G      ++LD+M E
Sbjct: 340 NEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEE 399

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TY I I+ LC  G ++ A + F+ +  K  +   V Y +++   C+ G ++ 
Sbjct: 400 YGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDS 459

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L+  +   +C P + TYNTLIDGL K   +++A+ L  +M + GI P   T   LI 
Sbjct: 460 AFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNILIK 519

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI-----HGLCKSKKVDMAIQVLELMIS 530
                 +  +A  + +++   G K     Y L I      G  K + +DMA  V+E+  +
Sbjct: 520 QMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMA--VVEMHEA 577

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             + PD   ++ I+K   D G+ E+A+    K++   +    TT
Sbjct: 578 GVF-PDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTT 620



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 123/447 (27%), Positives = 212/447 (47%), Gaps = 1/447 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL-QI 177
           T N ++   C    L DA   +  M      PD      L+ GL R   +  A  +  Q+
Sbjct: 92  TYNTLINAHCKLALLADARAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQM 151

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
               G   D  +Y +++ GLC  G+I  A  +  +MS   C P V TY  +L  +    +
Sbjct: 152 PRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRR 211

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A     + + KG  P ++TY  LI  +C++       ++L+ M I+  SPD  TY  
Sbjct: 212 VGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQ 271

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +V+  CK GK      V++  + +G+    +TYN L++     G   A   +L +M    
Sbjct: 272 VVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNR 331

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +P V T+N +I+G C  G V +A+    QM      P+ VT+N+++   C  G    AL
Sbjct: 332 VNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIAL 391

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL L+      P   TY   ID L  +G +E+A  L+  +   GI   ++ + +L+ G+
Sbjct: 392 RLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGY 451

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+   ++ A  L++++           Y  +I GLCK K++D AI +L+ M     +P  
Sbjct: 452 CQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTT 511

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
             F+ ++K++  D    +A K+++++I
Sbjct: 512 CTFNILIKQMLWDKKHADAAKMYEQMI 538



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 122/436 (27%), Positives = 197/436 (45%), Gaps = 36/436 (8%)

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           R  R+         M+ SG  P+  TYN ++   CK   +  A A L  M  +G  PD  
Sbjct: 67  RAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADARAALVRMREAGLAPDTF 126

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY-LITYTILIEQVCKQCGIARAIEVLDD 282
           TYN ++  +   G    A G +    R+    Y   +YTILI+ +C    I  A  V   
Sbjct: 127 TYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIKGLCAAGRIDDACRVFAK 186

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M+   C P + TY  L++  CK  +  +A  ++  ++++G+ PN +TYN L+  L   G 
Sbjct: 187 MSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVPNVVTYNALIGGLCQEGR 246

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
           +D V K+L+ M    HSP  +TY  +++GLCK+G V       ++ + K    +++TYN 
Sbjct: 247 FDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVLHEAIGKGVALEVLTYNA 306

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   CK G +  AL +L L+  +  +P + T+N +I G    G + KAM    QM   G
Sbjct: 307 LINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCGGKVHKAMAFLTQMAGAG 366

Query: 463 ISPDDITHRTLIWG-----------------------------------FCRADQVEEAV 487
           +SP+ +T  +LI G                                    C   Q+EEA 
Sbjct: 367 LSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVLPDRQTYAIFIDALCDEGQLEEAH 426

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L   +  +G K  N  Y  ++HG C+   +D A  ++E M S    PD   ++T++  +
Sbjct: 427 SLFSCLPMKGIKAHNVIYTSLVHGYCQVGDIDSAFGLMEKMASENCMPDVHTYNTLIDGL 486

Query: 548 ADDGMTEEAYKLWQKL 563
                 + A  L  K+
Sbjct: 487 CKVKRLDRAIDLLDKM 502



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 202/450 (44%), Gaps = 16/450 (3%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T N+++  FC  GK+  A   +  MA     P+     +LI G   +   + A ++L +
Sbjct: 337 QTFNEVIHGFCCGGKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDL 396

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G +PD  TY + +  LC  GQ+  A +L   + + G +   + Y +++      G 
Sbjct: 397 MEEYGVLPDRQTYAIFIDALCDEGQLEEAHSLFSCLPMKGIKAHNVIYTSLVHGYCQVGD 456

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A G  +    + C P + TY  LI+ +CK   + RAI++LD M  +G  P   T+N 
Sbjct: 457 IDSAFGLMEKMASENCMPDVHTYNTLIDGLCKVKRLDRAIDLLDKMKKQGIEPTTCTFNI 516

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW--DAVDKILDIMNE 355
           L+       K+ DA  +   ++S G +P+  TY   + +    G    + +D  +  M+E
Sbjct: 517 LIKQMLWDKKHADAAKMYEQMISSGCKPDKQTYTLKISTDWFEGATKEENIDMAVVEMHE 576

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC----KEG 411
           A   P V TYN +I      GL ++A  +  +M+S    PD  TY+ +L  +C     + 
Sbjct: 577 AGVFPDVETYNAIIKAYVDAGLKEKAFFAHVKMLSVPIDPDCTTYSILLNYMCNKDDSDA 636

Query: 412 MLNEAL----------QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
             NE +          +L   +  S  +P + TY  L+ GL  +  +E+   L  +M  N
Sbjct: 637 FDNEKIWKMVDVRNLQELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGN 696

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
            I  D+     L+  +C  +   EA +  + +  +  +    +  L++ GLC S    MA
Sbjct: 697 SILLDEDMSDYLLGCYCNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMA 756

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           + +   M+   Y  D+ V+  ++  + + G
Sbjct: 757 VSIFSDMLGLGYNYDEVVWKLLIDCLHEKG 786



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 97/354 (27%), Positives = 162/354 (45%), Gaps = 5/354 (1%)

Query: 221 DVITYNTILRTMFDNG----KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           DV ++N  L      G    +    +  +   L+ G PP   TY  LI   CK   +A A
Sbjct: 50  DVRSHNAALIAYSSRGSRAPRLAHLLASFGAMLKSGAPPNRCTYNTLINAHCKLALLADA 109

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLH 335
              L  M   G +PD  TYN L+   C+ G    A  +   +  R G   +  +Y  L+ 
Sbjct: 110 RAALVRMREAGLAPDTFTYNCLMLGLCRAGLLAAACGLFVQMPRRWGACYDRYSYTILIK 169

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L + G  D   ++   M+     P V TY +L++GLCK   V  A     +MV+K   P
Sbjct: 170 GLCAAGRIDDACRVFAKMSRGWCRPGVHTYTVLLDGLCKVRRVGEAEALLGEMVNKGVVP 229

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           ++VTYN ++G LC+EG  ++  +LL  +     SP   TY  ++ GL K G +     + 
Sbjct: 230 NVVTYNALIGGLCQEGRFDDVTKLLEKMEIQRHSPDCWTYTQVVHGLCKHGKVGHGAKVL 289

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            + +  G++ + +T+  LI G+C+   ++ A+D+L+ + +         +  VIHG C  
Sbjct: 290 HEAIGKGVALEVLTYNALINGYCKGGDMKAALDVLQLMKRNRVNPGVQTFNEVIHGFCCG 349

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            KV  A+  L  M  +   P+   F++++      G  + A +L   + E+ V 
Sbjct: 350 GKVHKAMAFLTQMAGAGLSPNTVTFNSLISGQCSVGERKIALRLLDLMEEYGVL 403



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 36/164 (21%), Positives = 67/164 (40%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           +L + M   +  P       L+RGL    R+E+   +L  M  +  + D    + ++G  
Sbjct: 653 ELFEQMCESDAAPGISTYKALLRGLCNQCRLEEVEWLLLKMQGNSILLDEDMSDYLLGCY 712

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C     R A      M+    +P + +   +L  + D+G    A+  + D L  G     
Sbjct: 713 CNLEMYREACEQFRSMAHQSFQPGLKSCCLLLSGLCDSGDHGMAVSIFSDMLGLGYNYDE 772

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           + + +LI+ + ++      +E+L  M  + C     TY SLV  
Sbjct: 773 VVWKLLIDCLHEKGHAGACLEMLSVMDAKKCVASTRTYASLVRL 816


>gi|451798817|gb|AGF69112.1| PPR [Raphanus sativus]
          Length = 479

 Score =  204 bits (520), Expect = 7e-50,   Method: Compositional matrix adjust.
 Identities = 133/422 (31%), Positives = 223/422 (52%), Gaps = 20/422 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   C   ++++A  L   M + N +        L+ GL R  R+ +A  +L  M
Sbjct: 52  TFNTLLHGLCVEDRVSEALDLFHQMCKPNVVT----FTTLMNGLCREGRVVEAVALLDRM 107

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDNGK 237
           V  G  P+ ITY  +V G+CK G   SA+ LL +M  +S  +PDV+ Y+ I+  ++ +G+
Sbjct: 108 VEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGR 167

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A   + +   KG  P ++TY+ +I   C     + A  +L +M +   SPD+VT++ 
Sbjct: 168 HTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSG 227

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-------CWDAVDK-I 349
           L+N   K+G  + A  ++  ++S G+ PN +T NTLL  L   G        + A+ K +
Sbjct: 228 LINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSM 287

Query: 350 LDIMNEASHS-----PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
           +DI  +A+H+     P V TYNILI+GL   G    A   + +M  +   PD VTY++++
Sbjct: 288 MDI--DATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMI 345

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LCK+  L+EA Q+   +   S SP ++T+NTLI G  K G ++  + L+ +M   GI 
Sbjct: 346 NGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLELFCEMGRRGIV 405

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
            + IT+ TLI GF +   +  ++D+ +E+   G        R ++ GL   +++  A+ +
Sbjct: 406 ANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWSKEELKKALAM 465

Query: 525 LE 526
           LE
Sbjct: 466 LE 467



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 222/455 (48%), Gaps = 16/455 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++ FCS  KL  A      + +    P       L+ GL   DR+ +A  +   M  
Sbjct: 19  NILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLFHQMCK 78

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P+ +T+  ++ GLC+ G++  A+ALLD M   G +P+ ITY TI+  M   G    
Sbjct: 79  ----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKMGDTVS 134

Query: 241 AIGFW-KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           A+    K +      P ++ Y+ +I+ + K      A  +  +M  +G  PDIVTY+ ++
Sbjct: 135 ALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMI 194

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  C  GK+ +A  ++  +L R + P+ +T++ L+++L   G  ++   +L  M  +   
Sbjct: 195 NGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVC 254

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQM-----------VSKNCQPDIVTYNTVLGALC 408
           P V T N L++GLC  G +  A+  F  M                +PD+ TYN ++  L 
Sbjct: 255 PNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLI 314

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
            EG   EA +L   +      P  +TY+++I+GL K+  +++A  ++  M     SP+ +
Sbjct: 315 NEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIV 374

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T  TLI G+C+A  V++ ++L  E+G+RG       Y  +I G  K   ++ ++ + + M
Sbjct: 375 TFNTLITGYCKAGMVDDGLELFCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEM 434

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ISS   PD      ++  +      ++A  + ++L
Sbjct: 435 ISSGVYPDTITIRNMLTGLWSKEELKKALAMLEEL 469



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 109/392 (27%), Positives = 196/392 (50%), Gaps = 26/392 (6%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D  ++N+++   C   ++  A++   +++  G  P ++T+NT+L  +    +  +A+   
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEAL--- 70

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            D   + C P ++T+T L+  +C++  +  A+ +LD M  +G  P+ +TY ++V+  CK 
Sbjct: 71  -DLFHQMCKPNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 306 GKYDDAVLVINNLLSRGME------PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           G   D V  +N  L R ME      P+ + Y+ ++  L   G       +   M +    
Sbjct: 130 G---DTVSALN--LLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIF 184

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P + TY+ +ING C  G    A     +M+ +   PD+VT++ ++ AL KEG LN A  L
Sbjct: 185 PDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVVTFSGLINALVKEGDLNSAQDL 244

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-----------NGISPDDI 468
           L  +  S   P ++T NTL+DGL   G ++ A+ ++  M +           NG+ PD  
Sbjct: 245 LQEMISSGVCPNVVTCNTLLDGLCDSGKLKDALEMFKAMQKSMMDIDATHAFNGVEPDVQ 304

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  LI G     +  EA +L +E+  RG       Y  +I+GLCK  ++D A Q+ + M
Sbjct: 305 TYNILISGLINEGKFLEAEELYEEMPHRGIVPDTVTYSSMINGLCKQSRLDEATQMFDSM 364

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            S  + P+   F+T++      GM ++  +L+
Sbjct: 365 GSKSFSPNIVTFNTLITGYCKAGMVDDGLELF 396



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/317 (29%), Positives = 153/317 (48%), Gaps = 11/317 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + I+      G+ TDA  L   M  +   PD      +I G     +  +A ++LQ M++
Sbjct: 156 SAIIDGLWKDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLV 215

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PD +T++ ++  L K G + SA  LL EM  SG  P+V+T NT+L  + D+GK K 
Sbjct: 216 RKISPDVVTFSGLINALVKEGDLNSAQDLLQEMISSGVCPNVVTCNTLLDGLCDSGKLKD 275

Query: 241 AIGFWKDQLRK-----------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           A+  +K   +            G  P + TY ILI  +  +     A E+ ++M   G  
Sbjct: 276 ALEMFKAMQKSMMDIDATHAFNGVEPDVQTYNILISGLINEGKFLEAEELYEEMPHRGIV 335

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD VTY+S++N  CKQ + D+A  + +++ S+   PN +T+NTL+      G  D   ++
Sbjct: 336 PDTVTYSSMINGLCKQSRLDEATQMFDSMGSKSFSPNIVTFNTLITGYCKAGMVDDGLEL 395

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M          TY  LI G  K G ++ +++ F +M+S    PD +T   +L  L  
Sbjct: 396 FCEMGRRGIVANAITYITLIRGFRKVGNINGSLDIFQEMISSGVYPDTITIRNMLTGLWS 455

Query: 410 EGMLNEALQLLHLLNGS 426
           +  L +AL +L  L  S
Sbjct: 456 KEELKKALAMLEELQMS 472



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 67/210 (31%), Positives = 112/210 (53%), Gaps = 5/210 (2%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           PT+ T+N L++GLC    V  A++ F+QM    C+P++VT+ T++  LC+EG + EA+ L
Sbjct: 48  PTLVTFNTLLHGLCVEDRVSEALDLFHQM----CKPNVVTFTTLMNGLCREGRVVEAVAL 103

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NGISPDDITHRTLIWGFC 478
           L  +      P  ITY T++DG+ K G    A+ L  +M E + I PD + +  +I G  
Sbjct: 104 LDRMVEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLW 163

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +  +A +L  E+  +G       Y  +I+G C S K   A ++L+ M+  +  PD  
Sbjct: 164 KDGRHTDAQNLFIEMQDKGIFPDIVTYSCMINGFCSSGKWSEAQRLLQEMLVRKISPDVV 223

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            FS ++  +  +G    A  L Q++I   V
Sbjct: 224 TFSGLINALVKEGDLNSAQDLLQEMISSGV 253



 Score = 77.8 bits (190), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/175 (29%), Positives = 87/175 (49%), Gaps = 5/175 (2%)

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           DI ++N ++   C    L  AL     L      P L+T+NTL+ GL  +  + +A+ L+
Sbjct: 14  DIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALDLF 73

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            QM +    P+ +T  TL+ G CR  +V EAV LL  + + G +     Y  ++ G+CK 
Sbjct: 74  HQMCK----PNVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMCKM 129

Query: 516 KKVDMAIQVLELMIS-SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
                A+ +L  M   S  KPD  ++S I+  +  DG   +A  L+ ++ +  +F
Sbjct: 130 GDTVSALNLLRKMEELSHIKPDVVIYSAIIDGLWKDGRHTDAQNLFIEMQDKGIF 184



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 38/137 (27%), Positives = 69/137 (50%), Gaps = 5/137 (3%)

Query: 430 PC-LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           PC + ++N LI        +  A+  +G++ + G  P  +T  TL+ G C  D+V EA+D
Sbjct: 12  PCDIYSFNILIKCFCSCSKLPFALSTFGKLTKLGFHPTLVTFNTLLHGLCVEDRVSEALD 71

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L  ++ K         +  +++GLC+  +V  A+ +L+ M+    +P+   + TIV  + 
Sbjct: 72  LFHQMCKP----NVVTFTTLMNGLCREGRVVEAVALLDRMVEDGLQPNQITYGTIVDGMC 127

Query: 549 DDGMTEEAYKLWQKLIE 565
             G T  A  L +K+ E
Sbjct: 128 KMGDTVSALNLLRKMEE 144


>gi|226501158|ref|NP_001146427.1| uncharacterized protein LOC100280009 [Zea mays]
 gi|219887141|gb|ACL53945.1| unknown [Zea mays]
          Length = 522

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 227/453 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N ++      GK +DA K+ D M     +P++     +I G ++   +E   ++ 
Sbjct: 15  DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRLR 74

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+ +TYN+++ GLC+ G++     L+DEM+     PD  TY+ +   +   
Sbjct: 75  DQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRT 134

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ +  +  + + L+KG      T +IL+  +CK   +A+A +VL+ +   G  P  V Y
Sbjct: 135 GESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIY 194

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  C+      A  +   + SR + P+ ITYN L++ L         + ++  M +
Sbjct: 195 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 254

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P+V T+N LI+     G +++     + M  K  + D++++ +V+ A CK G + E
Sbjct: 255 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 314

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ +L  +     +P    YN++ID   + G  E+A +L  +M  +G+S   +T+  L+ 
Sbjct: 315 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLK 374

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G CR+ Q++EA +L+  +  +G +    +Y  +I   C     D A+++L+ M     +P
Sbjct: 375 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 434

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
               + T+V  +A  G   +   L+Q+++   V
Sbjct: 435 TLRTYHTLVSALASAGRVHDMECLYQQMLHKNV 467



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 204/424 (48%), Gaps = 37/424 (8%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD----------------- 151
           DGP  + +  T N +L   C  G++ +   L+D MA  +  PD                 
Sbjct: 80  DGP--KPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTRTGES 137

Query: 152 ------------------FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMM 193
                              + C  L+ GL +  ++ KA +VL+++V +G VP T+ YN +
Sbjct: 138 RTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTL 197

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
           + G C+   +R A  + ++M      PD ITYN ++  +       +A     +  + G 
Sbjct: 198 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 257

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
            P + T+  LI+       + +   VL DM  +G   D++++ S+V   CK GK  +AV 
Sbjct: 258 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 317

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           ++++++ + + PN+  YN+++ +    G  +    +++ M  +  S ++ TYN+L+ GLC
Sbjct: 318 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLC 377

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           +   +D A      + ++  +PD+V+YNT++ A C +G  ++AL+LL  +N     P L 
Sbjct: 378 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 437

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TY+TL+  LA  G +     LY QM+   + P    +  ++  + R +   +   L KE+
Sbjct: 438 TYHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 497

Query: 494 GKRG 497
            ++G
Sbjct: 498 SEKG 501



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 202/419 (48%), Gaps = 35/419 (8%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           PD  +YN+++ GL + G+   A+ + DEM   G  P+ ITYNT++      G  +     
Sbjct: 14  PDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFRL 73

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
               L  G  P ++TY +L+  +C+   +     ++D+MA     PD  TY+ L +   +
Sbjct: 74  RDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLTR 133

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            G+    + +    L +G+   + T + LL+ L   G     +++L+++      PT   
Sbjct: 134 TGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVI 193

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN LING C+   +  A   F QM S++ +PD +TYN ++  LCK  M+ +A  L+  + 
Sbjct: 194 YNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEME 253

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
            S   P + T+NTLID     G +EK   +   M + GI  D I+  +++  FC+  ++ 
Sbjct: 254 KSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIP 313

Query: 485 EAVDLL-----KEIGKRGN-----------------------KMRNSA-------YRLVI 509
           EAV +L     K++                            KM+NS        Y L++
Sbjct: 314 EAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKMKNSGVSASIVTYNLLL 373

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            GLC+S ++D A +++  + +   +PD   ++TI+    + G T++A +L Q++ ++ +
Sbjct: 374 KGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGI 432



 Score =  151 bits (382), Expect = 7e-34,   Method: Compositional matrix adjust.
 Identities = 89/345 (25%), Positives = 164/345 (47%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L   C  GK+  A ++++++     +P       LI G  ++  +  A  + + M    
Sbjct: 162 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRH 221

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD ITYN ++ GLCK   +  A  L+ EM  SG +P V T+NT++      G+ ++  
Sbjct: 222 IRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCF 281

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               D  +KG    +I++  +++  CK   I  A+ +LDDM  +  +P+   YNS+++  
Sbjct: 282 TVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAY 341

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            + G  + A L++  + + G+  + +TYN LL  L      D  ++++  +      P V
Sbjct: 342 IESGDTEQAFLLVEKMKNSGVSASIVTYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDV 401

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            +YN +I+  C  G  D+A+    +M     +P + TY+T++ AL   G +++   L   
Sbjct: 402 VSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLRTYHTLVSALASAGRVHDMECLYQQ 461

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           +   +  P    Y  ++D   +     K   L  +M E GI+ DD
Sbjct: 462 MLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEMSEKGIAFDD 506



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 166/345 (48%), Gaps = 35/345 (10%)

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
           PP   +Y ++I  + +    + A++V D+M   G  P+ +TYN++++   K G  +    
Sbjct: 13  PPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDLEAGFR 72

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           + + +L  G +PN +TYN LL  L   G  D    ++D M   S  P  FTY+IL +GL 
Sbjct: 73  LRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSILFDGLT 132

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           + G     ++ F + + K       T + +L  LCK+G + +A Q+L +L  +   P  +
Sbjct: 133 RTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTV 192

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            YNTLI+G  +   +  A  ++ QM    I PD IT+  LI G C+ + V +A DL+ E+
Sbjct: 193 IYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEM 252

Query: 494 GKRG--------NKMRNS---------------------------AYRLVIHGLCKSKKV 518
            K G        N + ++                           ++  V+   CK+ K+
Sbjct: 253 EKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKI 312

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             A+ +L+ MI     P+  V+++I+    + G TE+A+ L +K+
Sbjct: 313 PEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQAFLLVEKM 357



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 57/191 (29%), Positives = 99/191 (51%)

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +E +  P  F+YN++I GL + G    A+  F++MV     P+ +TYNT++    K G L
Sbjct: 8   SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVVPNWITYNTMIDGHVKGGDL 67

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
               +L   +      P ++TYN L+ GL + G M++  VL  +M  + + PD  T+  L
Sbjct: 68  EAGFRLRDQMLHDGPKPNIVTYNVLLSGLCRAGRMDETRVLMDEMASHSMFPDGFTYSIL 127

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
             G  R  +    + L  E  K+G  +      ++++GLCK  KV  A QVLE+++ +  
Sbjct: 128 FDGLTRTGESRTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGL 187

Query: 534 KPDDTVFSTIV 544
            P   +++T++
Sbjct: 188 VPTTVIYNTLI 198


>gi|357151708|ref|XP_003575878.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Brachypodium distachyon]
          Length = 676

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 222/453 (49%), Gaps = 10/453 (2%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN----LIRGLIRIDRIEKASKVLQI 177
           +++  F   G+L +A+ ++  M R + +P   FC+     ++R  +       A KV   
Sbjct: 119 RMVAAFAEAGRLPEAADMVFEM-RSHGLP---FCVETANWVLRAGLDTGSFAYARKVFDG 174

Query: 178 MVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
           MV  GG+ PD  ++  ++ G C+ G++    ALL  M   G   D  T   I+R     G
Sbjct: 175 MVTRGGLLPDARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKG 234

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +F+     ++  L  G PP ++ YT  I+ +CK+  + +A  VL++M  +G  P++ T+ 
Sbjct: 235 RFRDVSELFRRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHT 294

Query: 297 SLVNFSCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           SL+N  CK G  + A  +   L+ S   +PN  TY  ++      G     + +L  M E
Sbjct: 295 SLINGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVE 354

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P   TY  LI+G CK G  + A    N+M  +  QP+I TYN ++  LCK+G + E
Sbjct: 355 QGLAPNTNTYTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQE 414

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A ++L + N        +TY  +I    K+G +  A+ L+ +M ENG  PD  T+ TLI 
Sbjct: 415 AYKVLRMANNQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIA 474

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            +C+  Q+EE+  L  +            Y  +I G CK  K   A++V E M+ +  + 
Sbjct: 475 RYCQQRQMEESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQA 534

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           D   +  ++  +  +   EEA  L++ +++ ++
Sbjct: 535 DSITYGALISGLCKESRLEEARALYEGMLDKRL 567



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 119/452 (26%), Positives = 223/452 (49%), Gaps = 6/452 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D ++   ++   C  G++ +   L+ +M  +    D   C  ++R   +  R    S++ 
Sbjct: 184 DARSFRALIVGCCRDGRMEEVDALLTVMQGQGFCLDNATCTVIVRVFCQKGRFRDVSELF 243

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  P+ + Y   + GLCKR  ++ A  +L+EM   G +P+V T+ +++  +   
Sbjct: 244 RRMLEMGTPPNVVNYTAWIDGLCKRAYVKQAFYVLEEMVAKGLKPNVYTHTSLINGLCKI 303

Query: 236 GKFKQAIGFWKDQLRKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           G  ++A   +   ++     P + TYT++I   CK+  +ARA  +L  M  +G +P+  T
Sbjct: 304 GWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 363

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +L++  CK+G ++ A  ++N +   G +PN  TYN L+  L  +G      K+L + N
Sbjct: 364 YTTLISGHCKEGSFNCAFELMNKMRREGFQPNIYTYNALIDGLCKKGKIQEAYKVLRMAN 423

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                    TY ++I   CK G +  A++ FN+M    C PDI TY T++   C++  + 
Sbjct: 424 NQGLQLDKVTYTVMITEHCKQGHITYALDLFNRMAENGCHPDIHTYTTLIARYCQQRQME 483

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           E+ +L          P   TY ++I G  K G    A+ ++ +M++NG   D IT+  LI
Sbjct: 484 ESQKLFDKCLAIELVPTKQTYTSMIAGYCKVGKSTSALRVFERMVQNGCQADSITYGALI 543

Query: 475 WGFCRADQVEEAVDLLKE-IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
            G C+  ++EEA  L +  + KR      +   L     C+ +K  +A+ +L+ +   R 
Sbjct: 544 SGLCKESRLEEARALYEGMLDKRLVPCEVTPVTLAFE-YCRREKAVVAVSILDRLDKRR- 601

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +   + +V+K++  G  E+A    +K ++
Sbjct: 602 --KNHTVNVLVRKLSAIGHVEDASLFLKKALD 631


>gi|357473969|ref|XP_003607269.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
 gi|355508324|gb|AES89466.1| UDP-glucoronosyl/UDP-glucosyl transferase family protein-like
           protein [Medicago truncatula]
          Length = 970

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/424 (30%), Positives = 211/424 (49%), Gaps = 3/424 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E    T   ++  +C   ++  A KL   M  +   P  +    LI GL   + + +AS
Sbjct: 459 LEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEAS 518

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+   MV     P  +TYN+M+ G CK   +  A  LL++M  +G  PD  TY  ++  +
Sbjct: 519 KLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGL 578

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A  F  D  +K      + Y+ L+   C Q  +  A+    +M   G + D+
Sbjct: 579 CSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDL 638

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V +  L++ + KQ        ++  +  +G+ P+S+ Y +++ +    G +    + LD+
Sbjct: 639 VCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDL 698

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P V TY   +NGLCK G +DRA + F +M++ N  P+ VTY   L +L KEG 
Sbjct: 699 MVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGN 758

Query: 413 LNEALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           + EA  L H +L G   +    TYN LI G  K G + +A  +  +M ENGI PD IT+ 
Sbjct: 759 MKEATDLHHEMLKGLLANTA--TYNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYS 816

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           T+I+  CR+  V  AV+L   + ++G +  + A+ L+I+G C +  +D A ++   M+S 
Sbjct: 817 TIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCCVNGALDKAFELRNDMLSR 876

Query: 532 RYKP 535
             KP
Sbjct: 877 GLKP 880



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 200/407 (49%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD + C  +IR L  +    +A + +  M  +      +TYN+++ GLCK G +  A+ +
Sbjct: 216 PDPYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEV 275

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
              +   G + DV+TY T++       +F   I    + +  G  P     + L++ + K
Sbjct: 276 RKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRK 335

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
           +  I  A +++  +   G  P++  YN+L+N  CK    D A L+  N+ S  +  N +T
Sbjct: 336 KGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVT 395

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y+ L+ S   RG  D  +     M E     T++ YN LING CK+G +  A   + +M+
Sbjct: 396 YSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMI 455

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           ++  +P   T+ T++   CK+  + +A +L   +N    +P + T+  LI GL     M 
Sbjct: 456 NEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMA 515

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A  L+ +M+E  I P ++T+  +I G+C+A  +++A +LL+++   G       YR +I
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
            GLC + +V  A   ++ +     K ++  +S ++      G   EA
Sbjct: 576 SGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEA 622



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 121/504 (24%), Positives = 221/504 (43%), Gaps = 44/504 (8%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           + K  H  +LP +D         T + ++ +FC RG L  A      M         +  
Sbjct: 380 LYKNMHSMNLPLND--------VTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPY 431

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
            +LI G  +   +  A  +   M+  G  P   T+  ++ G CK  Q+  A  L  EM+ 
Sbjct: 432 NSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNE 491

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
               P V T+  ++  +    +  +A   + + + +   P  +TY ++IE  CK   + +
Sbjct: 492 KEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDK 551

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A E+L+DM   G  PD  TY  L++  C  G+   A   I++L  + ++ N + Y+ LLH
Sbjct: 552 AFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLH 611

Query: 336 SLGSRG--------------------------CWDAVDK---------ILDIMNEASHSP 360
               +G                            D   K         +L  M +    P
Sbjct: 612 GYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRP 671

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
               Y  +I+   K G   ++    + MV++ C P++VTY   +  LCK G ++ A  L 
Sbjct: 672 DSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLF 731

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  ++ SP  +TY   +D L K+G M++A  L+ +M++ G+  +  T+  LI GFC+ 
Sbjct: 732 EKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTATYNILIRGFCKL 790

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++ EA  +L E+ + G       Y  +I+  C+S  V  A+++ + M+    +PD   F
Sbjct: 791 GRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAF 850

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           + ++     +G  ++A++L   ++
Sbjct: 851 NLLIYGCCVNGALDKAFELRNDML 874



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 208/411 (50%), Gaps = 6/411 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+   ++  R+  A  VL++M+ +  +P+  T + ++ GL +  +      + DE   +G
Sbjct: 154 LVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAG 213

Query: 218 CEPDVITYNTILRTMFDNGKF---KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
            +PD  T + ++R++ +   F   K+ I  W +  R      ++TY +LI  +CK  G+ 
Sbjct: 214 VKPDPYTCSAVIRSLCELKDFCRAKEKI-LWMESNRFDLS--IVTYNVLIHGLCKGGGVL 270

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+EV   +  +G   D+VTY +LV   C+  ++DD + ++N ++  G  P     + L+
Sbjct: 271 EALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLV 330

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
             L  +G  D+   ++  +      P +F YN LIN LCK   +D+A   +  M S N  
Sbjct: 331 DGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLP 390

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            + VTY+ ++ + CK GML+ A      +        +  YN+LI+G  K G +  A  L
Sbjct: 391 LNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFL 450

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y +M+  G+ P   T  TLI G+C+  QVE+A  L +E+ ++        +  +I+GLC 
Sbjct: 451 YTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCS 510

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + ++  A ++ + M+  + KP +  ++ +++        ++A++L + ++ 
Sbjct: 511 TNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLH 561



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/425 (26%), Positives = 208/425 (48%), Gaps = 10/425 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   CS  ++ +ASKL D M  R   P       +I G  +   ++KA ++L+ M
Sbjct: 500 TFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDM 559

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G VPDT TY  ++ GLC  G++ +A   +D++     + + + Y+ +L      G+ 
Sbjct: 560 LHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRL 619

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+    + +++G    L+ + +LI+   KQ  + R   +L  M  +G  PD V Y S+
Sbjct: 620 TEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSM 679

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+G +  +   ++ +++    PN +TY   ++ L   G  D    + + M  A+ 
Sbjct: 680 IDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANI 739

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP   TY   ++ L K G +  A +  ++M+ K    +  TYN ++   CK G L EA +
Sbjct: 740 SPNSVTYGCFLDSLTKEGNMKEATDLHHEML-KGLLANTATYNILIRGFCKLGRLIEATK 798

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +  +   P  ITY+T+I    + G +  A+ L+  M+  G+ PD +    LI+G C
Sbjct: 799 VLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTMLRKGVEPDSVAFNLLIYGCC 858

Query: 479 RADQVEEAVDLLKEIGKRGNKMRN---------SAYRLVIHGLCKSKKVDMAIQVLELMI 529
               +++A +L  ++  RG K R               ++HG C + +VD A+++   M+
Sbjct: 859 VNGALDKAFELRNDMLSRGLKPRQILQLQKRDLGVCNFLMHGGCVTGEVDTALRLYHSML 918

Query: 530 SSRYK 534
           +   K
Sbjct: 919 TRAVK 923



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 112/459 (24%), Positives = 211/459 (45%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G + +A ++   +  +    D      L+ G  R+ + +    ++  M
Sbjct: 255 TYNVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEM 314

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G VP     + +V GL K+G I SA  L+ ++   G  P++  YN ++  +      
Sbjct: 315 VELGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDL 374

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +K+      P   +TY+ILI+  CK+  +  A      M  +G    I  YNSL
Sbjct: 375 DKAELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSL 434

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G    A  +   +++ G+EP + T+ TL+         +   K+   MNE   
Sbjct: 435 INGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEI 494

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P+V+T+  LI GLC    +  A   F++MV +  +P  VTYN ++   CK   +++A +
Sbjct: 495 APSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFE 554

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +  +   P   TY  LI GL   G +  A      + +  +  +++ +  L+ G+C
Sbjct: 555 LLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYC 614

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              ++ EA+    E+ +RG  M    + ++I G  K + +     +L+ M     +PD  
Sbjct: 615 GQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSV 674

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           ++++++   + +G  +++ +    ++  K F    T  A
Sbjct: 675 IYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTA 713



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 210/480 (43%), Gaps = 38/480 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N ++   C    L  A  L   M   N  + D  + I LI    +   ++ A      M+
Sbjct: 362 NALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYSI-LIDSFCKRGMLDVAESYFGRMI 420

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G       YN ++ G CK G + +A  L  +M   G EP   T+ T++     + + +
Sbjct: 421 EDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVE 480

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A   +++   K   P + T+T LI  +C    +A A ++ D+M      P  VTYN ++
Sbjct: 481 KAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMAEASKLFDEMVERKIKPTEVTYNVMI 540

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              CK    D A  ++ ++L  G+ P++ TY  L+  L S G   A    +D +++ +  
Sbjct: 541 EGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLISGLCSTGRVSAAKDFIDDLHKKNLK 600

Query: 360 PTVFTYNILINGLCKYG-----------LVDRAINS------------------------ 384
                Y+ L++G C  G           ++ R IN                         
Sbjct: 601 LNEMCYSALLHGYCGQGRLTEALSASCEMIQRGINMDLVCHAVLIDGAMKQQDMKRLFGL 660

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M  +  +PD V Y +++ A  KEG   ++ + L L+    C P ++TY   ++GL K
Sbjct: 661 LKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGECLDLMVTEKCFPNVVTYTAFMNGLCK 720

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G +++A  L+ +M+   ISP+ +T+   +    +   ++EA DL  E+ K G     + 
Sbjct: 721 VGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTKEGNMKEATDLHHEMLK-GLLANTAT 779

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y ++I G CK  ++  A +VL  M  +   PD   +STI+ +    G    A +LW  ++
Sbjct: 780 YNILIRGFCKLGRLIEATKVLSEMTENGIFPDCITYSTIIYEHCRSGDVGAAVELWDTML 839



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 96/436 (22%), Positives = 199/436 (45%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
           +G +  A  L+  + R   +P+      LI  L + + ++KA  + + M       + +T
Sbjct: 336 KGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVT 395

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y++++   CKRG +  A +    M   G    +  YN+++      G    A   +   +
Sbjct: 396 YSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLINGHCKFGDLSAAEFLYTKMI 455

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            +G  P   T+T LI   CK   + +A ++  +M  +  +P + T+ +L+   C   +  
Sbjct: 456 NEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEIAPSVYTFTALIYGLCSTNEMA 515

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A  + + ++ R ++P  +TYN ++         D   ++L+ M      P  +TY  LI
Sbjct: 516 EASKLFDEMVERKIKPTEVTYNVMIEGYCKAHNMDKAFELLEDMLHNGLVPDTYTYRPLI 575

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +GLC  G V  A +  + +  KN + + + Y+ +L   C +G L EAL     +     +
Sbjct: 576 SGLCSTGRVSAAKDFIDDLHKKNLKLNEMCYSALLHGYCGQGRLTEALSASCEMIQRGIN 635

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
             L+ +  LIDG  K+  M++   L  +M + G+ PD + + ++I  + +    +++ + 
Sbjct: 636 MDLVCHAVLIDGAMKQQDMKRLFGLLKKMYDQGLRPDSVIYTSMIDAYSKEGSFKKSGEC 695

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L  +           Y   ++GLCK  ++D A  + E M+++   P+   +   +  +  
Sbjct: 696 LDLMVTEKCFPNVVTYTAFMNGLCKVGEIDRAGHLFEKMLTANISPNSVTYGCFLDSLTK 755

Query: 550 DGMTEEAYKLWQKLIE 565
           +G  +EA  L  ++++
Sbjct: 756 EGNMKEATDLHHEMLK 771



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 96/418 (22%), Positives = 177/418 (42%), Gaps = 55/418 (13%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T ++ ++V  L +      A +LL  + + G +P  + +   L +     KF   +GF  
Sbjct: 96  TTSFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFV-FEKFLES-HKQCKFSSTLGF-- 151

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
                           L+    +   +  A+ VL  M      P++ T ++++N   +  
Sbjct: 152 --------------DFLVHSYLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIR 197

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS-RGCWDAVDKILDIMNEASHSPTVFTY 365
           K+     V +  ++ G++P+  T + ++ SL   +    A +KIL  M       ++ TY
Sbjct: 198 KFILVWEVFDESVNAGVKPDPYTCSAVIRSLCELKDFCRAKEKIL-WMESNRFDLSIVTY 256

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC----------------- 408
           N+LI+GLCK G V  A+     +  K  + D+VTY T++   C                 
Sbjct: 257 NVLIHGLCKGGGVLEALEVRKSLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVE 316

Query: 409 ------------------KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
                             K+G ++ A  L+  L      P L  YN LI+ L K   ++K
Sbjct: 317 LGFVPTEAAVSGLVDGLRKKGNIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDK 376

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A +LY  M    +  +D+T+  LI  FC+   ++ A      + + G +     Y  +I+
Sbjct: 377 AELLYKNMHSMNLPLNDVTYSILIDSFCKRGMLDVAESYFGRMIEDGIRETIYPYNSLIN 436

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           G CK   +  A  +   MI+   +P  T F+T++     D   E+A+KL++++ E ++
Sbjct: 437 GHCKFGDLSAAEFLYTKMINEGLEPTATTFTTLISGYCKDLQVEKAFKLYREMNEKEI 494



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 90/384 (23%), Positives = 162/384 (42%), Gaps = 22/384 (5%)

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD-QLRKGCPPYLI 258
           RG +   IA  D    S  +P  +    ++ T+ D+   K A+ F+    L K       
Sbjct: 42  RGNLSWKIAFNDPSISSTLKPHHVE-QVLINTLHDS---KLALRFFNFLGLHKNMNHTTT 97

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT-----------------YNSLVNF 301
           ++ IL+  + +      A  +L  + + G  P  V                  ++ LV+ 
Sbjct: 98  SFAILVHALVQNKLFWPANSLLHTLLLRGSDPKFVFEKFLESHKQCKFSSTLGFDFLVHS 157

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             +  +  DAV+V+  +L   + P   T + +L+ L     +  V ++ D    A   P 
Sbjct: 158 YLQNTRVFDAVVVLRLMLGNTLLPEVRTLSAILNGLLRIRKFILVWEVFDESVNAGVKPD 217

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            +T + +I  LC+     RA      M S      IVTYN ++  LCK G + EAL++  
Sbjct: 218 PYTCSAVIRSLCELKDFCRAKEKILWMESNRFDLSIVTYNVLIHGLCKGGGVLEALEVRK 277

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L        ++TY TL+ G  +    +  + L  +M+E G  P +     L+ G  +  
Sbjct: 278 SLREKGLKEDVVTYCTLVLGFCRVQQFDDGICLMNEMVELGFVPTEAAVSGLVDGLRKKG 337

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            ++ A DL+ ++G+ G       Y  +I+ LCK + +D A  + + M S     +D  +S
Sbjct: 338 NIDSAYDLVVKLGRFGFLPNLFVYNALINALCKGEDLDKAELLYKNMHSMNLPLNDVTYS 397

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++      GM + A   + ++IE
Sbjct: 398 ILIDSFCKRGMLDVAESYFGRMIE 421


>gi|357466003|ref|XP_003603286.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355492334|gb|AES73537.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1246

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 128/473 (27%), Positives = 224/473 (47%), Gaps = 39/473 (8%)

Query: 131 GKLTDASKLIDIMARRNQI---PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           G+  D  K+++++     I   P+ +     IR L R  RI+ A  + + M   G  PD 
Sbjct: 246 GRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDV 305

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           ITY +++  LC  G++  A  L  +M  S   PD +TY T++      G  +    FW +
Sbjct: 306 ITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNE 365

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
               G  P ++TYTILIE +CK   + RA ++LD M  +G  P++ TYN+++    K  +
Sbjct: 366 MEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARR 425

Query: 308 YDDAVLVINNLLSRGMEPNSITY-----------------------------------NT 332
            D+A+ ++ N+ S G++P + +Y                                   N 
Sbjct: 426 LDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNA 485

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
            L++L   G     + I + +++   SP   TYN+L+    K G +D+A    ++M+SK 
Sbjct: 486 SLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKG 545

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C+PD++  N+++  L K G ++ A ++   L     +P ++TYN L+ GL K+G + KA+
Sbjct: 546 CEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNILLTGLGKEGKILKAL 605

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L+G M E+G  P+ IT  +L+    + D V+ A+ +   +           Y  +I+GL
Sbjct: 606 ELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGL 665

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +  ++D A      M      PD     T++  V   G  E+A K+  + + 
Sbjct: 666 IREGRIDYAFWFFHQM-KKFLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVH 717



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 125/463 (26%), Positives = 223/463 (48%), Gaps = 9/463 (1%)

Query: 110 GPFVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGL 162
           G F E D++       T   ++   C+ GKL  A +L   M   +  PD    I L+   
Sbjct: 291 GIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKF 350

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
            ++  +E   +    M + G  PD +TY +++  LCK G +  A  +LD M+  G  P++
Sbjct: 351 GKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNL 410

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            TYNT++  +    +  +A+   ++    G  P   +Y + I+   K    A+AI+  + 
Sbjct: 411 HTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFET 470

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G  P I   N+ +    + G+  +A  + N+L   G+ P+S+TYN L+      G 
Sbjct: 471 MKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQ 530

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            D   ++L  M      P V   N LIN L K G VD A   F ++ +    P +VTYN 
Sbjct: 531 IDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKLAPTVVTYNI 590

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           +L  L KEG + +AL+L   +  S C P  IT+N+L+D L+K   ++ A+ ++ +M    
Sbjct: 591 LLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRMTMMN 650

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
            +PD +T+ T+I+G  R  +++ A     ++ K  +    +   L I G+ +  +V+ AI
Sbjct: 651 CNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFLSPDYVTLCTL-IPGVVRHGRVEDAI 709

Query: 523 Q-VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + V+E +  +  + +   +  +++ +  +   EEA    + L+
Sbjct: 710 KVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILV 752



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 131/520 (25%), Positives = 235/520 (45%), Gaps = 73/520 (14%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T N +++ +   G++  A++L+  M  +   PD     +LI  L +  R++ A K+ 
Sbjct: 514  DSVTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMF 573

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC----------------- 218
              +      P  +TYN+++ GL K G+I  A+ L   M+ SGC                 
Sbjct: 574  GRLKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKN 633

Query: 219  ------------------EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
                               PDV+TYNTI+  +   G+   A  F+  Q++K   P  +T 
Sbjct: 634  DAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFH-QMKKFLSPDYVTL 692

Query: 261  TILIEQVCKQCGIARAIEVLDDMAIEGC--------------------------SPDIVT 294
              LI  V +   +  AI+V+ +   + C                            +I+ 
Sbjct: 693  CTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILV 752

Query: 295  YNS----------LVNFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLHSLGSRGCW 343
             NS          L+   CK+ K  DA  V +      G+ P   +YN L+  L      
Sbjct: 753  CNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFT 812

Query: 344  DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
            +   ++ + M  A   P  FTYN+L++   K   +++  + +++M S+ C+P+ +T+N +
Sbjct: 813  EKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNII 872

Query: 404  LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
            + AL K   LN+AL L + L     SP   TY  LIDGL K G  E+AM ++ +M++ G 
Sbjct: 873  ISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGC 932

Query: 464  SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
             P+ + +  LI GF ++ +++ A +L K++ K G +    +Y +++  LC + ++D A+Q
Sbjct: 933  GPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQ 992

Query: 524  VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              E +  +   PD   ++ I+  +      +EA  L+ ++
Sbjct: 993  YFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEM 1032



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 142/576 (24%), Positives = 256/576 (44%), Gaps = 31/576 (5%)

Query: 16  CLPNLQWCSRQVSLQHGVVNNH--RTQFYSQLRDLGAGRNVSLKCRGLP--GNVCIDRVN 71
           C   + +C         V+ NH   T  + +++ L  G  ++LK  G    G+     + 
Sbjct: 14  CNNGMSFCYTLTDTNFYVLTNHGGPTTNFVKIKTLSNGSLLNLKKHGTTRVGHRAFRTIT 73

Query: 72  EVDQDEWSSESHVLAVNKKLRG-----------LTITKKSHDPSLPSSDGPFVENDEKTN 120
             + D     + ++ VN   R            +TI K   DP+  S+   F    + TN
Sbjct: 74  RCNHD-----NDLVVVNNGKRKKNKTSVSEEEVMTILKSISDPN--SAFSYFKIVSQLTN 126

Query: 121 --------NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
                   N +L+    + ++ D   + D+M ++    +    + + + L     I +A 
Sbjct: 127 FVHTTDACNYMLEILREQRRIEDMVFVFDLMQKKVIYRNLTTYMTIFKALSIKGGIGRAP 186

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             L+ M   G + +  +YN ++  L   G    A+ +   M   G +P + TY+ ++  +
Sbjct: 187 FALRKMTEVGFILNAYSYNGLIH-LLLPGFCNEALKVYKRMISEGMKPSMKTYSALMVAL 245

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G  ++ +   ++    G  P + TYTI I  + +   I  A  +  +M  EGC PD+
Sbjct: 246 GRRGDTRKIMNLLEEMKSIGLRPNIYTYTICIRALGRARRIDDAWGIFKEMDDEGCGPDV 305

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TY  L++  C  GK D A  +   + +    P+ +TY TL+   G  G  + V +  + 
Sbjct: 306 ITYTVLIDALCAAGKLDKAKELYVKMRASSHSPDRVTYITLMDKFGKVGDLETVKRFWNE 365

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M    ++P V TY ILI  LCK G VDRA +  + M +K   P++ TYNT++  L K   
Sbjct: 366 MEVDGYAPDVVTYTILIEALCKSGDVDRAFDMLDVMTTKGIFPNLHTYNTMICGLLKARR 425

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EAL+LL  +      P   +Y   ID   K G   KA+  +  M + GI P       
Sbjct: 426 LDEALELLENMESLGVKPTAFSYVLFIDYYGKSGDPAKAIDTFETMKKRGIMPSIAACNA 485

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
            ++      ++ EA D+  ++ K G    +  Y +++    K+ ++D A Q+L  MIS  
Sbjct: 486 SLYTLAETGRISEAEDIFNDLHKCGLSPDSVTYNMLMKCYSKAGQIDKATQLLSEMISKG 545

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            +PD  + ++++  +   G  + A+K++ +L   K+
Sbjct: 546 CEPDVMIINSLINTLYKAGRVDAAWKMFGRLKNLKL 581



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/476 (25%), Positives = 215/476 (45%), Gaps = 41/476 (8%)

Query: 131 GKLTDASKLIDI---MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           GK  D +K ID    M +R  +P    C   +  L    RI +A  +   +   G  PD+
Sbjct: 456 GKSGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDS 515

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +TYNM++    K GQI  A  LL EM   GCEPDV+  N+++ T++  G+   A   +  
Sbjct: 516 VTYNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGR 575

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
                  P ++TY IL+  + K+  I +A+E+   M   GC P+ +T+NSL++   K   
Sbjct: 576 LKNLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDA 635

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D A+ +   +      P+ +TYNT+++ L   G  D        M +   SP   T   
Sbjct: 636 VDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMKKFL-SPDYVTLCT 694

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNC-QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           LI G+ ++G V+ AI    + V + C Q +   +  ++  +  E  + EA+    +L  +
Sbjct: 695 LIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCN 754

Query: 427 SC------------------------------------SPCLITYNTLIDGLAKKGCMEK 450
           S                                      P L +YN L+DGL      EK
Sbjct: 755 SVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEK 814

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+ L+  M   G  P++ T+  L+    ++ ++ +  DL  E+  RG +     + ++I 
Sbjct: 815 ALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCEPNAITHNIIIS 874

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            L KS  ++ A+ +   ++S  + P    +  ++  +   G +E+A K++++++++
Sbjct: 875 ALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDY 930



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/429 (26%), Positives = 202/429 (47%), Gaps = 35/429 (8%)

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A KV + M+  G  P   TY+ ++  L +RG  R  + LL+EM   G  P++ TY   +
Sbjct: 218 EALKVYKRMISEGMKPSMKTYSALMVALGRRGDTRKIMNLLEEMKSIGLRPNIYTYTICI 277

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL--------- 280
           R +    +   A G +K+   +GC P +ITYT+LI+ +C    + +A E+          
Sbjct: 278 RALGRARRIDDAWGIFKEMDDEGCGPDVITYTVLIDALCAAGKLDKAKELYVKMRASSHS 337

Query: 281 --------------------------DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
                                     ++M ++G +PD+VTY  L+   CK G  D A  +
Sbjct: 338 PDRVTYITLMDKFGKVGDLETVKRFWNEMEVDGYAPDVVTYTILIEALCKSGDVDRAFDM 397

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           ++ + ++G+ PN  TYNT++  L      D   ++L+ M      PT F+Y + I+   K
Sbjct: 398 LDVMTTKGIFPNLHTYNTMICGLLKARRLDEALELLENMESLGVKPTAFSYVLFIDYYGK 457

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G   +AI++F  M  +   P I   N  L  L + G ++EA  + + L+    SP  +T
Sbjct: 458 SGDPAKAIDTFETMKKRGIMPSIAACNASLYTLAETGRISEAEDIFNDLHKCGLSPDSVT 517

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           YN L+   +K G ++KA  L  +M+  G  PD +   +LI    +A +V+ A  +   + 
Sbjct: 518 YNMLMKCYSKAGQIDKATQLLSEMISKGCEPDVMIINSLINTLYKAGRVDAAWKMFGRLK 577

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
                     Y +++ GL K  K+  A+++   M  S   P+   F++++  ++ +   +
Sbjct: 578 NLKLAPTVVTYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVD 637

Query: 555 EAYKLWQKL 563
            A K++ ++
Sbjct: 638 LALKMFCRM 646



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 208/448 (46%), Gaps = 2/448 (0%)

Query: 112  FVENDEKTNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
            F+  D  T   ++      G++ DA K++ + + +     +  F   L+  ++    IE+
Sbjct: 684  FLSPDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEE 743

Query: 171  ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTIL 229
            A    +I+V +    D      ++  LCKR +   A  + D+ + + G  P + +YN ++
Sbjct: 744  AISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLM 803

Query: 230  RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
              +  +   ++A+  ++D    G  P   TY +L++   K   I +  ++  +M   GC 
Sbjct: 804  DGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMRSRGCE 863

Query: 290  PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            P+ +T+N +++   K    + A+ +   L+S    P   TY  L+  L   G  +   KI
Sbjct: 864  PNAITHNIIISALVKSNNLNKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKI 923

Query: 350  LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
             + M +    P    YNILING  K G +D A   F +MV +  +PD+ +Y  ++  LC 
Sbjct: 924  FEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCI 983

Query: 410  EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
             G ++EA+Q    L  +   P  ++YN +I+GL K   +++A+ L+ +M   GISPD  T
Sbjct: 984  TGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYT 1043

Query: 470  HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
            +  LI     A +V+ AV + +E+   G +     Y  +I G   S   D A  V + M+
Sbjct: 1044 YNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFSVFKKMM 1103

Query: 530  SSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                 P+   F+ +  K    G+    +
Sbjct: 1104 VVGCSPNTETFAQLPNKYPRAGLVHNPF 1131



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/485 (23%), Positives = 219/485 (45%), Gaps = 44/485 (9%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N +L      GK+  A +L   M      P+     +L+  L + D ++ A K+   M
Sbjct: 587  TYNILLTGLGKEGKILKALELFGSMTESGCPPNTITFNSLLDCLSKNDAVDLALKMFCRM 646

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             M    PD +TYN ++ GL + G+I  A     +M      PD +T  T++  +  +G+ 
Sbjct: 647  TMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQMK-KFLSPDYVTLCTLIPGVVRHGRV 705

Query: 239  KQAIGFWKDQLRKGC---------------------------PPYLITYTI--------- 262
            + AI    + + + C                              L+  ++         
Sbjct: 706  EDAIKVVMEFVHQACLQTNSQFWGELMECILTEAEIEEAISFAEILVCNSVCQDDHVMLP 765

Query: 263  LIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            LI+ +CK+     A  V D      G  P + +YN L++        + A+ +  ++ S 
Sbjct: 766  LIKVLCKRKKALDAQNVFDKFTKNLGIHPTLESYNCLMDGLLGSNFTEKALELFEDMKSA 825

Query: 322  GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH---SPTVFTYNILINGLCKYGLV 378
            G  PN+ TYN LL + G       ++K+ D+ +E       P   T+NI+I+ L K   +
Sbjct: 826  GTHPNNFTYNLLLDAHGKS---KRINKLYDLYSEMRSRGCEPNAITHNIIISALVKSNNL 882

Query: 379  DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
            ++A++ + +++S +  P   TY  ++  L K G   +A+++   +    C P  + YN L
Sbjct: 883  NKALDLYYELMSGDFSPTPCTYGPLIDGLLKAGRSEQAMKIFEEMLDYGCGPNSVIYNIL 942

Query: 439  IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
            I+G  K G ++ A  L+ +M++ GI PD  ++  L+   C   +++EAV   +E+   G 
Sbjct: 943  INGFGKSGEIDFACELFKKMVKEGIRPDLKSYTILVECLCITGRIDEAVQYFEELKLTGL 1002

Query: 499  KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                 +Y  +I+GL KS+++D A+ +   M +    PD   ++ ++  +   G  + A K
Sbjct: 1003 DPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGISPDLYTYNALILHLGIAGKVDVAVK 1062

Query: 559  LWQKL 563
            ++++L
Sbjct: 1063 MYEEL 1067



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 116/486 (23%), Positives = 224/486 (46%), Gaps = 44/486 (9%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N +L        +  A K+   M   N  PD      +I GLIR  RI+ A      M
Sbjct: 622  TFNSLLDCLSKNDAVDLALKMFCRMTMMNCNPDVLTYNTIIYGLIREGRIDYAFWFFHQM 681

Query: 179  --VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC-EPDVITYNTILRTMFDN 235
               +S   PD +T   ++ G+ + G++  AI ++ E     C + +   +  ++  +   
Sbjct: 682  KKFLS---PDYVTLCTLIPGVVRHGRVEDAIKVVMEFVHQACLQTNSQFWGELMECILTE 738

Query: 236  GKFKQAIGFWK----------------------------------DQLRK--GCPPYLIT 259
             + ++AI F +                                  D+  K  G  P L +
Sbjct: 739  AEIEEAISFAEILVCNSVCQDDHVMLPLIKVLCKRKKALDAQNVFDKFTKNLGIHPTLES 798

Query: 260  YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
            Y  L++ +       +A+E+ +DM   G  P+  TYN L++   K  + +    + + + 
Sbjct: 799  YNCLMDGLLGSNFTEKALELFEDMKSAGTHPNNFTYNLLLDAHGKSKRINKLYDLYSEMR 858

Query: 320  SRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
            SRG EPN+IT+N ++ +L  S     A+D   ++M+    SPT  TY  LI+GL K G  
Sbjct: 859  SRGCEPNAITHNIIISALVKSNNLNKALDLYYELMS-GDFSPTPCTYGPLIDGLLKAGRS 917

Query: 379  DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
            ++A+  F +M+   C P+ V YN ++    K G ++ A +L   +      P L +Y  L
Sbjct: 918  EQAMKIFEEMLDYGCGPNSVIYNILINGFGKSGEIDFACELFKKMVKEGIRPDLKSYTIL 977

Query: 439  IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
            ++ L   G +++A+  + ++   G+ PD +++  +I G  ++ +++EA+ L  E+  RG 
Sbjct: 978  VECLCITGRIDEAVQYFEELKLTGLDPDTVSYNFIINGLGKSRRLDEALSLFSEMKNRGI 1037

Query: 499  KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                  Y  +I  L  + KVD+A+++ E +     +P    ++ +++  +  G  ++A+ 
Sbjct: 1038 SPDLYTYNALILHLGIAGKVDVAVKMYEELQLVGLEPSVFTYNALIRGHSLSGNKDQAFS 1097

Query: 559  LWQKLI 564
            +++K++
Sbjct: 1098 VFKKMM 1103


>gi|148907853|gb|ABR17050.1| unknown [Picea sitchensis]
 gi|224284228|gb|ACN39850.1| unknown [Picea sitchensis]
          Length = 420

 Score =  204 bits (520), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 109/329 (33%), Positives = 180/329 (54%), Gaps = 2/329 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D I+Y+  + GLCK+GQI  A+ +  EM   G  PD  TYN ++  +  + + +  +   
Sbjct: 90  DVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLM 149

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            +   +G  P ++TYT LI   C    +  A+++LD+M   G +P+ VTY +L+   C  
Sbjct: 150 DEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDC 209

Query: 306 GKYDDAVLVINNLLSRGME--PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           G+ + A+LV+  +  RG E  PN +TY  L+H L  +G ++   + LD M  +   P   
Sbjct: 210 GEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNA 269

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TY  LI+GLC+ G    A    N+MV+  C+ D+V YN+++  LCK G L+ A ++  L+
Sbjct: 270 TYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILM 329

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                +P + TY +LI GL   G +++A+ L  +M   GI P+ +T+ TLI GF +AD+ 
Sbjct: 330 VEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRT 389

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           + A+ L+ E+   G       Y+++   L
Sbjct: 390 DHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/318 (32%), Positives = 169/318 (53%), Gaps = 2/318 (0%)

Query: 159 IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
           I GL +  +I +A ++ + M   G  PD+ TYN+++ GLCK  Q+   ++L+DEM   G 
Sbjct: 98  INGLCKKGQIAEAMEIFREMEEKGSAPDSFTYNILINGLCKDAQLEMGVSLMDEMQARGF 157

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
            P V+TY T++      G+   A+    +   +G  P  +TYT LI+ +C    + RAI 
Sbjct: 158 SPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAIL 217

Query: 279 VLDDMAIEG--CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           VL +M + G  C P++VTY  L++  C++G ++  +  ++ ++  G  PN+ TY  L+H 
Sbjct: 218 VLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHG 277

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L  +G +     +L+ M        V  YN LI+GLCK G +D A      MV K   PD
Sbjct: 278 LCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPD 337

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           + TY +++  LC  G+L+EAL L+  +      P  +TY TLI+G  +    + A+ L  
Sbjct: 338 VFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVN 397

Query: 457 QMMENGISPDDITHRTLI 474
           +M  NG+ P    ++ L 
Sbjct: 398 EMKSNGLMPAGDIYKILF 415



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 103/351 (29%), Positives = 189/351 (53%), Gaps = 2/351 (0%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           +R  I S++ +     ++  + DVI+Y+  +  +   G+  +A+  +++   KG  P   
Sbjct: 68  RRRGIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSF 127

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY ILI  +CK   +   + ++D+M   G SP +VTY +L++  C  G+ D A+ +++ +
Sbjct: 128 TYNILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEM 187

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS--PTVFTYNILINGLCKYG 376
             RG+ PN++TY  L+  L   G  +    +L  M    +   P V TY  LI+GLC+ G
Sbjct: 188 EHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKG 247

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
           L +  +   ++M+   C P+  TY  ++  LC++G   EA  LL+ +    C   ++ YN
Sbjct: 248 LFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYN 307

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           +LIDGL K G ++ A  +   M+E G++PD  T+ +LI G C A  ++EA+ L++E+  +
Sbjct: 308 SLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAK 367

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           G    +  Y  +I+G  ++ + D A+Q++  M S+   P   ++  + K +
Sbjct: 368 GIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSL 418



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 193/362 (53%), Gaps = 9/362 (2%)

Query: 85  LAV-NKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIM 143
           LAV  ++ RG+  + + + P L +S     + D  + ++ +   C +G++ +A ++   M
Sbjct: 62  LAVRTRRRRGIPSSLRIYRPKLLNSQ----DTDVISYSRKINGLCKKGQIAEAMEIFREM 117

Query: 144 ARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
             +   PD F + I LI GL +  ++E    ++  M   G  P  +TY  ++ G C  G+
Sbjct: 118 EEKGSAPDSFTYNI-LINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGR 176

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITY 260
           + +A+ +LDEM   G  P+ +TY  +++ + D G+ ++AI   K+   +G  C P ++TY
Sbjct: 177 VDAAMDILDEMEHRGITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTY 236

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           T LI  +C++      +E LD+M I GC P+  TY +L++  C++G + +A +++N +++
Sbjct: 237 TQLIHGLCQKGLFEMGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVA 296

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G E + + YN+L+  L   G  D   ++  +M E   +P VFTY  LI GLC  GL+D 
Sbjct: 297 IGCELDVVIYNSLIDGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDE 356

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+    +M +K   P+ VTY T++    +    + ALQL++ +  +   P    Y  L  
Sbjct: 357 ALGLMQEMRAKGIVPNSVTYTTLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFK 416

Query: 441 GL 442
            L
Sbjct: 417 SL 418



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 89/294 (30%), Positives = 154/294 (52%), Gaps = 2/294 (0%)

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
           GI  ++ +     +     D+++Y+  +N  CK+G+  +A+ +   +  +G  P+S TYN
Sbjct: 71  GIPSSLRIYRPKLLNSQDTDVISYSRKINGLCKKGQIAEAMEIFREMEEKGSAPDSFTYN 130

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            L++ L      +    ++D M     SPTV TY  LI+G C  G VD A++  ++M  +
Sbjct: 131 ILINGLCKDAQLEMGVSLMDEMQARGFSPTVVTYTTLIHGFCTAGRVDAAMDILDEMEHR 190

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLH--LLNGSSCSPCLITYNTLIDGLAKKGCME 449
              P+ VTY  ++  LC  G +  A+ +L    L G+ C P ++TY  LI GL +KG  E
Sbjct: 191 GITPNTVTYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFE 250

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
             M    +M+ +G  P++ T+  LI G C+     EA  LL E+   G ++    Y  +I
Sbjct: 251 MGMEFLDEMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLI 310

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            GLCK  ++D A ++  LM+     PD   ++++++ + D G+ +EA  L Q++
Sbjct: 311 DGLCKMGELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEM 364



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 67/223 (30%), Positives = 110/223 (49%), Gaps = 2/223 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQ--IPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           T   ++Q  C  G++  A  ++  M  R     P+      LI GL +    E   + L 
Sbjct: 198 TYTALIQGLCDCGEVERAILVLKEMKLRGNECCPNVVTYTQLIHGLCQKGLFEMGMEFLD 257

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M++SG  P+  TY  ++ GLC++G    A  LL+EM   GCE DV+ YN+++  +   G
Sbjct: 258 EMIISGCFPNNATYTALIHGLCQKGSFLEAAVLLNEMVAIGCELDVVIYNSLIDGLCKMG 317

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +   A       + KG  P + TYT LI+ +C    +  A+ ++ +M  +G  P+ VTY 
Sbjct: 318 ELDFAREMQILMVEKGVAPDVFTYTSLIQGLCDAGLLDEALGLMQEMRAKGIVPNSVTYT 377

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           +L+N   +  + D A+ ++N + S G+ P    Y  L  SL S
Sbjct: 378 TLINGFTQADRTDHALQLVNEMKSNGLMPAGDIYKILFKSLYS 420


>gi|242069921|ref|XP_002450237.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
 gi|241936080|gb|EES09225.1| hypothetical protein SORBIDRAFT_05g002370 [Sorghum bicolor]
          Length = 757

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 232/445 (52%), Gaps = 5/445 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARR---NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           +L+ FC+  +  +A +L+ +MA     +  P+      +I GL +   +++A  V Q M+
Sbjct: 170 LLKGFCNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMI 229

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  P+  TY  ++ G    G+ +  + +L EMS  G +PD   Y  +L  +  NG+  
Sbjct: 230 DKGVRPNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCT 289

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A   +   +RKG  P +  Y IL+     +  ++     LD M   G SPD   +N + 
Sbjct: 290 EARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMF 349

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASH 358
               K+   D+A+ + + +  + + PN +TY  L+ +L   G   DAV K   +++E   
Sbjct: 350 CAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGM- 408

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P +F ++ L+ GLC     ++A   F +++ +  + D V +NT++  LC+EG + EA +
Sbjct: 409 TPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQR 468

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+ L+      P +I+YNTL+DG    G +++A  L   ++  G+ PD +T+ TL+ G+C
Sbjct: 469 LIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYC 528

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A ++++A  L +E+  +G       Y  ++HGL ++ +   A ++   MI+SR + +  
Sbjct: 529 KARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIY 588

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++ I+  +  +   +EA+K++  L
Sbjct: 589 TYNIIINGLCKNNFVDEAFKMFHSL 613



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 194/401 (48%), Gaps = 2/401 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  V  D    N +   +  +  + +A  + D M ++   P+      LI  L ++ R++
Sbjct: 335 GNGVSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVD 394

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A      M+  G  PD   ++ +V GLC   +   A  L  E+   G   D + +NT++
Sbjct: 395 DAVLKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLM 454

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G+  +A       LR G  P +I+Y  L++  C    I  A ++LD +   G  
Sbjct: 455 CNLCREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLK 514

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD VTYN+L++  CK  + DDA  +   +L +G+ P+ +TYNT+LH L   G +    ++
Sbjct: 515 PDKVTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKEL 574

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M  +     ++TYNI+INGLCK   VD A   F+ + SK+ Q DI T N ++GAL K
Sbjct: 575 YLSMINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLK 634

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G   +A+ L   ++     P + TY  + + L K+G +E+   L+  M ENG +P+   
Sbjct: 635 GGRKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRM 694

Query: 470 HRTLI-WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
              L+ W   R D +  A   L ++ ++   +  S   ++I
Sbjct: 695 LNALVRWLLHRGD-INRAGAYLSKLDEKNFSLEASTTSMLI 734



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 112/443 (25%), Positives = 207/443 (46%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L   C  G+ T+A  + D + R+   P+      L+ G      + +    L +MV +G
Sbjct: 278 LLDYLCKNGRCTEARNIFDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNG 337

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD   +N+M     K+  I  A+ + D+M      P+++TY  ++  +   G+   A+
Sbjct: 338 VSPDHHIFNIMFCAYAKKAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAV 397

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +   + +G  P +  ++ L+  +C      +A E+  ++  +G   D V +N+L+   
Sbjct: 398 LKFNQMIDEGMTPDIFVFSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNL 457

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C++G+  +A  +I+ +L  G+ P+ I+YNTL+      G  D   K+LD++      P  
Sbjct: 458 CREGRVMEAQRLIDLMLRVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDK 517

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN L++G CK   +D A + F +M+ K   PD+VTYNT+L  L + G  +EA +L   
Sbjct: 518 VTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLS 577

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  S     + TYN +I+GL K   +++A  ++  +    +  D  T   +I    +  +
Sbjct: 578 MINSRTQMNIYTYNIIINGLCKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGR 637

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
            E+A+DL   I   G       Y L+   L K   ++   ++   M  +   P+  + + 
Sbjct: 638 KEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNA 697

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           +V+ +   G    A     KL E
Sbjct: 698 LVRWLLHRGDINRAGAYLSKLDE 720



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 96/455 (21%), Positives = 190/455 (41%), Gaps = 108/455 (23%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP-DVITYNTILRTMFDNGKFKQAI 242
            P + TY +++G  C+ G+++   A    +  +G    D + ++ +L+ + D  +  +A 
Sbjct: 89  APSSFTYTILIGCFCRMGRLKHGFAAFGLILKTGWRVNDTVIFSQLLKGLCDAKRVDEA- 147

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               D L +  P +                              GC+PD+ +Y+ L+   
Sbjct: 148 ---TDILLRRMPEF------------------------------GCTPDVFSYSILLKGF 174

Query: 303 CKQGKYDDAVLVINNLLSRG---MEPNSITYNT--------------------------- 332
           C + + ++A+ +++ +   G     PN +TY T                           
Sbjct: 175 CNEKRAEEALELLSMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQHMIDKGVR 234

Query: 333 --------LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
                   L+H   S G W  V ++L  M+     P  + Y +L++ LCK G    A N 
Sbjct: 235 PNNHTYTCLIHGYLSIGKWKEVVQMLQEMSTHGLQPDCYIYAVLLDYLCKNGRCTEARNI 294

Query: 385 FNQMVSKNCQPDIVTY-----------------------------------NTVLGALCK 409
           F+ ++ K  +P++  Y                                   N +  A  K
Sbjct: 295 FDSVIRKGIKPNVTIYGILLHGYATEGSLSEMHSFLDLMVGNGVSPDHHIFNIMFCAYAK 354

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           + M++EA+ +   +     SP ++TY  LID L K G ++ A++ + QM++ G++PD   
Sbjct: 355 KAMIDEAMHIFDKMRQQRLSPNIVTYGALIDALCKLGRVDDAVLKFNQMIDEGMTPDIFV 414

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             +L++G C  D+ E+A +L  E+  +G ++    +  ++  LC+  +V  A ++++LM+
Sbjct: 415 FSSLVYGLCTVDKWEKAEELFFEVLDQGIRLDTVFFNTLMCNLCREGRVMEAQRLIDLML 474

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               +PD   ++T+V      G  +EA KL   ++
Sbjct: 475 RVGVRPDVISYNTLVDGHCLTGRIDEAAKLLDVIV 509



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 65/258 (25%), Positives = 117/258 (45%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  + N ++   C  G++ +A+KL+D++      PD      L+ G  +  RI+ A 
Sbjct: 478 VRPDVISYNTLVDGHCLTGRIDEAAKLLDVIVSIGLKPDKVTYNTLLHGYCKARRIDDAY 537

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M+M G  PD +TYN ++ GL + G+   A  L   M  S  + ++ TYN I+  +
Sbjct: 538 SLFREMLMKGLTPDVVTYNTILHGLFQTGRFSEAKELYLSMINSRTQMNIYTYNIIINGL 597

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N    +A   +     K     + T  I+I  + K      A+++   ++  G  PD+
Sbjct: 598 CKNNFVDEAFKMFHSLCSKDLQLDIFTANIMIGALLKGGRKEDAMDLFATISAYGLVPDV 657

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY  +     K+G  ++   + + +   G  PNS   N L+  L  RG  +     L  
Sbjct: 658 ETYCLIAENLIKEGSLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDINRAGAYLSK 717

Query: 353 MNEASHSPTVFTYNILIN 370
           ++E + S    T ++LI+
Sbjct: 718 LDEKNFSLEASTTSMLIS 735


>gi|224130936|ref|XP_002320961.1| predicted protein [Populus trichocarpa]
 gi|222861734|gb|EEE99276.1| predicted protein [Populus trichocarpa]
          Length = 474

 Score =  204 bits (520), Expect = 9e-50,   Method: Compositional matrix adjust.
 Identities = 111/362 (30%), Positives = 195/362 (53%), Gaps = 5/362 (1%)

Query: 137 SKLIDIMARRNQIPDFHFCINLIRGLIRIDR-IEKASKVLQIMVMSGGVPDTITYNMMVG 195
           SK I+ +     I      IN    L R+D  +   SK+L++    G  P  +T+  ++ 
Sbjct: 85  SKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSVLSKILKL----GLEPSIVTFTTLLN 140

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
           GLC  G++   + L D+M V G +P+V TYN I+ ++  +GK  +A+GF K   + GC P
Sbjct: 141 GLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVP 200

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            ++ Y+ LI+  C +  +  A  V D M  +GC+P++ TY SL+N  CK  + ++AV ++
Sbjct: 201 NVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLL 260

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           +  L +G+ P+ +T+ T++  L   G   A  ++   +    H+P + TY +L++GLCK+
Sbjct: 261 DETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKH 320

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G ++ A   F +M     +P++V Y  ++ +LCK G + +  +L   L      P + TY
Sbjct: 321 GNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTY 380

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
             L+  L K+G + +A  L+ +M E+G +PD   +  +I GF +      A  L++E+  
Sbjct: 381 TALVGALCKEGLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVN 440

Query: 496 RG 497
           RG
Sbjct: 441 RG 442



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 94/396 (23%), Positives = 190/396 (47%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A    ++M++   +P  + ++ +   + + G   + + L  E+   G E D+ + + +
Sbjct: 44  DDALASFRLMLLRKPLPCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSIL 103

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +       +    +      L+ G  P ++T+T L+  +C +  + + + + DDM + G 
Sbjct: 104 INCFCHLHRVDFGLSVLSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGL 163

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P++ TYN ++N   K GK ++A+  +  +   G  PN + Y+TL+     RG  D    
Sbjct: 164 QPNVYTYNVIINSLSKSGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARS 223

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + D+M     +P V+TY  L+NG CK   ++ A+   ++ + K   PDIVT+ T++  LC
Sbjct: 224 VFDLMVSKGCTPNVYTYTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLC 283

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           + G    A QL   +     +P ++TY  L+DGL K G +E+A  L+ +M  + + P+ +
Sbjct: 284 RAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLV 343

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            +  LI   C+  ++++  +L   +   G K     Y  ++  LCK   +  A ++   M
Sbjct: 344 IYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKM 403

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                 PD   ++ I++          A +L ++++
Sbjct: 404 EEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMV 439



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 98/346 (28%), Positives = 179/346 (51%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P ++ ++ +  ++   G ++  +   K+    G    + + +ILI   C    +   + V
Sbjct: 60  PCIVEFSKLFSSIVRMGHYETVVYLSKEIEFLGIEQDIHSLSILINCFCHLHRVDFGLSV 119

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L  +   G  P IVT+ +L+N  C +GK D  +++ +++L RG++PN  TYN +++SL  
Sbjct: 120 LSKILKLGLEPSIVTFTTLLNGLCMEGKMDQVMMLYDDMLVRGLQPNVYTYNVIINSLSK 179

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G  +     L  M +    P V  Y+ LI+G C  G +D A + F+ MVSK C P++ T
Sbjct: 180 SGKANEALGFLKQMEKVGCVPNVVNYSTLIDGYCLRGQMDEARSVFDLMVSKGCTPNVYT 239

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y +++   CK   + EA+QLL         P ++T+ T+I GL + G    A  L+  + 
Sbjct: 240 YTSLMNGYCKIERIEEAVQLLDETLRKGLVPDIVTFTTIISGLCRAGRPLAAQQLFRYIC 299

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
            +G +P+ +T+  L+ G C+   +EEA  L +E+ +   K     Y ++I  LCK  K+ 
Sbjct: 300 AHGHTPNIMTYGVLLDGLCKHGNLEEAFALFQEMQRSTVKPNLVIYTILIDSLCKCGKIK 359

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              ++   +I    KP+   ++ +V  +  +G+  EA+KL++K+ E
Sbjct: 360 DGKELFSRLIDEGLKPNVYTYTALVGALCKEGLIIEAHKLFRKMEE 405



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 44/186 (23%), Positives = 81/186 (43%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+   C  G+   A +L   +      P+      L+ GL +   +E+A  + 
Sbjct: 271 DIVTFTTIISGLCRAGRPLAAQQLFRYICAHGHTPNIMTYGVLLDGLCKHGNLEEAFALF 330

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M  S   P+ + Y +++  LCK G+I+    L   +   G +P+V TY  ++  +   
Sbjct: 331 QEMQRSTVKPNLVIYTILIDSLCKCGKIKDGKELFSRLIDEGLKPNVYTYTALVGALCKE 390

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   ++     GC P    Y ++I+   +    + A +++++M   G S D  T 
Sbjct: 391 GLIIEAHKLFRKMEEDGCTPDKCAYNVIIQGFLQHKDPSMARQLVEEMVNRGFSADAATR 450

Query: 296 NSLVNF 301
             L +F
Sbjct: 451 ALLNDF 456


>gi|357477483|ref|XP_003609027.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355510082|gb|AES91224.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 583

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 111/402 (27%), Positives = 210/402 (52%), Gaps = 3/402 (0%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  L+  L++ ++I     V + M+      +  T+N+ + GLC+ G++  A   +++M 
Sbjct: 168 CNPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMK 227

Query: 215 VSGCEPDVITYNTILRTMFDNG---KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
             G  P+V+TYNT++      G   K  +A  F K+ L     P  +T+  LI+  CK  
Sbjct: 228 AWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDE 287

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            +A A +  ++M  +G  P+IVTYNSL+N  C  GK ++A+ + + ++  G++PN +TYN
Sbjct: 288 NVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYN 347

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            L++    +       K+ D +++    P V T+N +I+  CK G+++   +  + M+ +
Sbjct: 348 ALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDE 407

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              P++ TYN ++  LC++  L  A +LL+ +        ++TYN LIDGL K      A
Sbjct: 408 GILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNA 467

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             L  +M   G+ P+ +T+ TL+ G+C   +++ A+++   + K   +     Y ++I G
Sbjct: 468 EKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKG 527

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            CK  K++ A  +L  M+     P+ T +  +  ++ + G +
Sbjct: 528 YCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFS 569



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 107/355 (30%), Positives = 185/355 (52%), Gaps = 3/355 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR---IDRIEKASKVL 175
           T N  +   C  GKL  A   I+ M      P+      L+ G  +     ++ KA   +
Sbjct: 202 TFNIFINGLCRAGKLNKAEDAIEDMKAWGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFM 261

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+ +   P+ +T+N ++ G CK   + +A    +EM   G +P+++TYN+++  + +N
Sbjct: 262 KEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNN 321

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK ++AI  W   +  G  P ++TY  LI   CK+  +  A +V DD++ +   P+++T+
Sbjct: 322 GKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITF 381

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++  CK+G  ++   + +++L  G+ PN  TYN L+  L  +    A  ++L+ M  
Sbjct: 382 NTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMEN 441

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 V TYNILI+GLCK      A    N+M +   +P+ VTYNT++   C EG L  
Sbjct: 442 KGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKA 501

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           AL +   +      P ++TYN LI G  K   +E A  L  +M+E G++P+  T+
Sbjct: 502 ALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTY 556



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/390 (29%), Positives = 199/390 (51%), Gaps = 5/390 (1%)

Query: 172 SKVLQIMVMSGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           S V   +++ GG P    +  +M+V    K  ++  A          G +  + + N +L
Sbjct: 113 SSVFHSLLLDGGRPGATALIIDMLVLAYVKNLELHCAYEAFTRAKDYGFKLSLTSCNPLL 172

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +    K       +K+ +++     L T+ I I  +C+   + +A + ++DM   G S
Sbjct: 173 SALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKAWGIS 232

Query: 290 PDIVTYNSLVNFSCKQ---GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           P++VTYN+LV+  CK+   GK   A   +  +L+  + PN +T+NTL+          A 
Sbjct: 233 PNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAA 292

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            K  + M +    P + TYN LINGLC  G ++ AI+ +++MV    +P+IVTYN ++  
Sbjct: 293 KKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALING 352

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK+ M+ EA ++   ++     P +IT+NT+ID   K+G ME+   L   M++ GI P+
Sbjct: 353 FCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPN 412

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             T+  LI G CR   ++ A +LL E+  +G K     Y ++I GLCK+ K   A ++L 
Sbjct: 413 VSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLN 472

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
            M +   KP+   ++T++     +G  + A
Sbjct: 473 EMFNLGLKPNHVTYNTLMDGYCMEGKLKAA 502



 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 115/391 (29%), Positives = 199/391 (50%), Gaps = 3/391 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L       K+ D   +   M +R    + +     I GL R  ++ KA   ++ M  
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228

Query: 181 SGGVPDTITYNMMVGGLCKR---GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            G  P+ +TYN +V G CKR   G++  A A + EM  +   P+ +T+NT++     +  
Sbjct: 229 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 288

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A   +++  ++G  P ++TY  LI  +C    +  AI++ D M   G  P+IVTYN+
Sbjct: 289 VAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNA 348

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK+    +A  V +++  + + PN IT+NT++ +    G  +    +   M +  
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TYN LI GLC+   +  A    N+M +K  + D+VTYN ++  LCK      A 
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 468

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL+ +      P  +TYNTL+DG   +G ++ A+ +  +M +    P+ +T+  LI G+
Sbjct: 469 KLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGY 528

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           C+ +++E A  LL E+ ++G     + Y +V
Sbjct: 529 CKINKLEAANGLLNEMLEKGLNPNRTTYDIV 559



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 104/378 (27%), Positives = 179/378 (47%), Gaps = 3/378 (0%)

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N ++  L K  +I     +  EM       ++ T+N  +  +   GK  +A    +D   
Sbjct: 169 NPLLSALVKENKIGDVEYVYKEMIKRRIHTNLNTFNIFINGLCRAGKLNKAEDAIEDMKA 228

Query: 251 KGCPPYLITYTILIEQVCKQCG---IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            G  P ++TY  L++  CK+     + +A   + +M      P+ VT+N+L++  CK   
Sbjct: 229 WGISPNVVTYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDEN 288

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
              A      +  +G++PN +TYN+L++ L + G  +    + D M      P + TYN 
Sbjct: 289 VAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNA 348

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING CK  ++  A   F+ +  +   P+++T+NT++ A CKEGM+ E   L   +    
Sbjct: 349 LINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEG 408

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P + TYN LI GL +K  ++ A  L  +M   G+  D +T+  LI G C+ D+   A 
Sbjct: 409 ILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAE 468

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            LL E+   G K  +  Y  ++ G C   K+  A+ V   M   R +P+   ++ ++K  
Sbjct: 469 KLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGY 528

Query: 548 ADDGMTEEAYKLWQKLIE 565
                 E A  L  +++E
Sbjct: 529 CKINKLEAANGLLNEMLE 546



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 95/314 (30%), Positives = 159/314 (50%), Gaps = 2/314 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++  FC    +  A K  + M ++   P+     +LI GL    ++E+A  + 
Sbjct: 272 NEVTFNTLIDGFCKDENVAAAKKAFEEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLW 331

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  P+ +TYN ++ G CK+  ++ A  + D++S     P+VIT+NT++      
Sbjct: 332 DKMVGLGLKPNIVTYNALINGFCKKKMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKE 391

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++        L +G  P + TY  LI  +C++  +  A E+L++M  +G   D+VTY
Sbjct: 392 GMMEEGFSLCSSMLDEGILPNVSTYNCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTY 451

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  CK  K  +A  ++N + + G++PN +TYNTL+      G   A   +   M +
Sbjct: 452 NILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEK 511

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V TYN+LI G CK   ++ A    N+M+ K   P+  TY+ V   + ++G   +
Sbjct: 512 ERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEMLEKGFSPD 571

Query: 416 ALQLLHLLNGSSCS 429
                HL N SS S
Sbjct: 572 IEG--HLYNISSMS 583



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 96/355 (27%), Positives = 166/355 (46%), Gaps = 19/355 (5%)

Query: 119 TNNKILQNFCSRG---KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           T N ++  +C RG   K+  A   +  M      P+      LI G  + + +  A K  
Sbjct: 237 TYNTLVDGYCKRGSAGKMYKAEAFMKEMLANKICPNEVTFNTLIDGFCKDENVAAAKKAF 296

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  P+ +TYN ++ GLC  G++  AI L D+M   G +P+++TYN ++      
Sbjct: 297 EEMQKQGLKPNIVTYNSLINGLCNNGKLEEAIDLWDKMVGLGLKPNIVTYNALINGFCKK 356

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              K+A   + D  ++   P +IT+  +I+  CK+  +     +   M  EG  P++ TY
Sbjct: 357 KMMKEATKVFDDVSKQELVPNVITFNTMIDAYCKEGMMEEGFSLCSSMLDEGILPNVSTY 416

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+   C++     A  ++N + ++G++ + +TYN L+  L         +K+L+ M  
Sbjct: 417 NCLIAGLCRKQDLQAAKELLNEMENKGLKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFN 476

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TYN L++G C  G +  A+N   +M  +  QP++VTYN ++   CK   L  
Sbjct: 477 LGLKPNHVTYNTLMDGYCMEGKLKAALNVRTRMEKERKQPNVVTYNVLIKGYCKINKLEA 536

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           A  LL+ +     +P   TY+                ++  +M+E G SPD   H
Sbjct: 537 ANGLLNEMLEKGLNPNRTTYD----------------IVRLEMLEKGFSPDIEGH 575



 Score = 52.8 bits (125), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 33/124 (26%), Positives = 58/124 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++   C   K  +A KL++ M      P+      L+ G     +++ A 
Sbjct: 444 LKGDVVTYNILIDGLCKNDKSRNAEKLLNEMFNLGLKPNHVTYNTLMDGYCMEGKLKAAL 503

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V   M      P+ +TYN+++ G CK  ++ +A  LL+EM   G  P+  TY+ +   M
Sbjct: 504 NVRTRMEKERKQPNVVTYNVLIKGYCKINKLEAANGLLNEMLEKGLNPNRTTYDIVRLEM 563

Query: 233 FDNG 236
            + G
Sbjct: 564 LEKG 567


>gi|15221540|ref|NP_172145.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75205637|sp|Q9SHK2.1|PPR17_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g06580
 gi|6692678|gb|AAF24812.1|AC007592_5 F12K11.8 [Arabidopsis thaliana]
 gi|332189887|gb|AEE28008.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 500

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 123/388 (31%), Positives = 201/388 (51%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  +   ++  FC   +L+ A   +  M +    P      +L+ G   ++R  +A 
Sbjct: 110 ISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAM 169

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  +V  G  P+ + YN ++  LC++GQ+ +A+ +L  M   G  PDV+TYN+++  +
Sbjct: 170 SLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRL 229

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F +G +  +     D +R G  P +IT++ LI+   K+  +  A +  ++M     +P+I
Sbjct: 230 FHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNI 289

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYNSL+N  C  G  D+A  V+N L+S+G  PN++TYNTL++        D   KIL +
Sbjct: 290 VTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCV 349

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M+        FTYN L  G C+ G    A     +MVS    PD+ T+N +L  LC  G 
Sbjct: 350 MSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGK 409

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +AL  L  L  S     +ITYN +I GL K   +E A  L+  +   G+SPD IT+ T
Sbjct: 410 IGKALVRLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYIT 469

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           ++ G  R     EA +L +++ K    M
Sbjct: 470 MMIGLRRKRLWREAHELYRKMQKEDGLM 497



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 221/435 (50%), Gaps = 6/435 (1%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI---MVMSGGVPDTI 188
           K  DA  L   MA  + +P     ++  R LI I ++ K   V+ +   + M G   D  
Sbjct: 59  KFNDALTLFCDMAESHPLPSI---VDFSRLLIAIAKLNKYEAVISLFRHLEMLGISHDLY 115

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           ++  ++   C+  ++  A++ L +M   G EP ++T+ +++       +F +A+      
Sbjct: 116 SFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFYEAMSLVDQI 175

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  G  P ++ Y  +I+ +C++  +  A++VL  M   G  PD+VTYNSL+      G +
Sbjct: 176 VGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLITRLFHSGTW 235

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             +  ++++++  G+ P+ IT++ L+   G  G      K  + M + S +P + TYN L
Sbjct: 236 GVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVNPNIVTYNSL 295

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           INGLC +GL+D A    N +VSK   P+ VTYNT++   CK   +++ +++L +++    
Sbjct: 296 INGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKILCVMSRDGV 355

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
                TYNTL  G  + G    A  + G+M+  G+ PD  T   L+ G C   ++ +A+ 
Sbjct: 356 DGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGVHPDMYTFNILLDGLCDHGKIGKALV 415

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
            L+++ K    +    Y ++I GLCK+ KV+ A  +   +      PD   + T++  + 
Sbjct: 416 RLEDLQKSKTVVGIITYNIIIKGLCKADKVEDAWYLFCSLALKGVSPDVITYITMMIGLR 475

Query: 549 DDGMTEEAYKLWQKL 563
              +  EA++L++K+
Sbjct: 476 RKRLWREAHELYRKM 490



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 81/344 (23%), Positives = 168/344 (48%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y   LR+   + KF  A+  + D       P ++ ++ L+  + K       I +   + 
Sbjct: 47  YRERLRSGLHSIKFNDALTLFCDMAESHPLPSIVDFSRLLIAIAKLNKYEAVISLFRHLE 106

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
           + G S D+ ++ +L++  C+  +   A+  +  ++  G EP+ +T+ +L++       + 
Sbjct: 107 MLGISHDLYSFTTLIDCFCRCARLSLALSCLGKMMKLGFEPSIVTFGSLVNGFCHVNRFY 166

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               ++D +    + P V  YN +I+ LC+ G V+ A++    M     +PD+VTYN+++
Sbjct: 167 EAMSLVDQIVGLGYEPNVVIYNTIIDSLCEKGQVNTALDVLKHMKKMGIRPDVVTYNSLI 226

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             L   G    + ++L  +     SP +IT++ LID   K+G + +A   Y +M++  ++
Sbjct: 227 TRLFHSGTWGVSARILSDMMRMGISPDVITFSALIDVYGKEGQLLEAKKQYNEMIQRSVN 286

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P+ +T+ +LI G C    ++EA  +L  +  +G       Y  +I+G CK+K+VD  +++
Sbjct: 287 PNIVTYNSLINGLCIHGLLDEAKKVLNVLVSKGFFPNAVTYNTLINGYCKAKRVDDGMKI 346

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           L +M       D   ++T+ +     G    A K+  +++   V
Sbjct: 347 LCVMSRDGVDGDTFTYNTLYQGYCQAGKFSAAEKVLGRMVSCGV 390


>gi|302761712|ref|XP_002964278.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
 gi|300168007|gb|EFJ34611.1| hypothetical protein SELMODRAFT_80975 [Selaginella moellendorffii]
          Length = 331

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 108/309 (34%), Positives = 170/309 (55%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           PD +TY  +V  LCK  +I  A+A ++EM+  G +PD   YN +L  +    K ++A   
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           ++  +++   P ++TY  LI  +CK   I  A E+  +MA +G  P  V+YN+L++  CK
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           +     A  V + ++     PN +TY TL+  L   G   A  ++LD M +   +P V T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y+ LI+G CK   VD A     QMV++   P +VTYN +L +LC+   L +A +L   + 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
              C P ++TYNTL+  L     ++ A  LY +M+  G  PD IT+ TL WG  RA +V 
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKVH 306

Query: 485 EAVDLLKEI 493
           EA +L++++
Sbjct: 307 EAQELMEKM 315



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 101/313 (32%), Positives = 160/313 (51%)

Query: 146 RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRS 205
           R   PD      ++  L +  RI+ A   ++ M   G  PD   YN ++ GLC+  ++  
Sbjct: 3   RYAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEE 62

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A  L ++M      P+V+TYNT++  +    + + A   +K+   KG  P  ++Y  LI+
Sbjct: 63  ARLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLID 122

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             CK+  +  A +V D M    C P++VTY +L++   K GK   A  V++ ++ +G+ P
Sbjct: 123 GFCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTP 182

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N  TY+ L+         D   K+L+ M     +PTV TYNIL+N LC+   ++ A   F
Sbjct: 183 NVATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLF 242

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
             M  + C P +VTYNT+L ALC    L+ A +L   +    C P  ITY+TL  GL + 
Sbjct: 243 RGMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRA 302

Query: 446 GCMEKAMVLYGQM 458
           G + +A  L  +M
Sbjct: 303 GKVHEAQELMEKM 315



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 96/319 (30%), Positives = 169/319 (52%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           +   D  T   I++  C   ++ DA   ++ MA R   PD      ++ GL + +++E+A
Sbjct: 4   YAPPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEA 63

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             + + MV     P+ +TYN ++ GLCK  +I +A  L  EM+  G  P  ++YNT++  
Sbjct: 64  RLLFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDG 123

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
                    A   +   +R  C P ++TYT LI+ + K   +  A EVLD M  +G +P+
Sbjct: 124 FCKKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPN 183

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           + TY+ L++  CK  + D+A  ++  ++++G+ P  +TYN LL+SL      +   K+  
Sbjct: 184 VATYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFR 243

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M +    PTV TYN L+  LC +  +D A   + +M++K C PD +TY+T+   L + G
Sbjct: 244 GMAQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAG 303

Query: 412 MLNEALQLLHLLNGSSCSP 430
            ++EA +L+  +  +  +P
Sbjct: 304 KVHEAQELMEKMKLTKRNP 322



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 95/310 (30%), Positives = 167/310 (53%)

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
           PP  +TY  ++E++CK   I  A+  +++MA  G  PD   YN +++  C++ K ++A L
Sbjct: 6   PPDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARL 65

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           +   ++ + + PN +TYNTL++ L      +   ++   M    + PT  +YN LI+G C
Sbjct: 66  LFEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFC 125

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K   +  A + F++MV  NC P++VTY T++  L K G +  A ++L  +     +P + 
Sbjct: 126 KKKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVA 185

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TY+ LIDG  K   +++A  L  QM+  GI+P  +T+  L+   CRAD++E+A  L + +
Sbjct: 186 TYSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGM 245

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            +R        Y  ++  LC  K++D A ++   MI+    PD   + T+   +   G  
Sbjct: 246 AQRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMIAKGCPPDAITYDTLAWGLTRAGKV 305

Query: 554 EEAYKLWQKL 563
            EA +L +K+
Sbjct: 306 HEAQELMEKM 315



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 84/275 (30%), Positives = 152/275 (55%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD +TY  +V   CK  + DDA+  +  + +RG++P++  YN +L  L      +    +
Sbjct: 7   PDALTYGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLL 66

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            + M +   +P V TYN LINGLCK   ++ A   F +M  K   P  V+YNT++   CK
Sbjct: 67  FEKMVKQRINPNVVTYNTLINGLCKAWRIETAYELFKEMAGKGYVPTEVSYNTLIDGFCK 126

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +  L  A  +   +  S+C P ++TY TLIDGL+K G ++ A  +   M++ G++P+  T
Sbjct: 127 KKDLVAAKDVFDKMVRSNCVPNVVTYTTLIDGLSKSGKVQAAAEVLDGMVKKGVTPNVAT 186

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  LI GFC+  +V+EA  LL+++  +G       Y ++++ LC++ K++ A ++   M 
Sbjct: 187 YSCLIDGFCKVRRVDEAHKLLEQMVTQGIAPTVVTYNILLNSLCRADKLEDAFKLFRGMA 246

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             R  P    ++T+++ +      + A++L+ ++I
Sbjct: 247 QRRCHPTVVTYNTLLRALCHHKQLDGAHRLYAEMI 281



 Score = 41.6 bits (96), Expect = 1.1,   Method: Compositional matrix adjust.
 Identities = 17/64 (26%), Positives = 39/64 (60%)

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  ++  LCK+K++D A+  +E M +   KPD  +++ ++  +  +   EEA  L++K++
Sbjct: 12  YGPIVERLCKTKRIDDALATVEEMATRGIKPDAFIYNFVLSGLCQEEKVEEARLLFEKMV 71

Query: 565 EWKV 568
           + ++
Sbjct: 72  KQRI 75


>gi|255553139|ref|XP_002517612.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223543244|gb|EEF44776.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 794

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/431 (29%), Positives = 214/431 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   +++  C  GK+ D  KLI+    R  +P+  F   LI G  +    E+A+ 
Sbjct: 169 EVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPNIVFYNTLIDGYCKKGDTERANV 228

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + + M G +P   TY  ++ G CK+G+      LL EMS  G +  +  YN I+   F
Sbjct: 229 LFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQF 288

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +G   +A       ++ GC P + TY ILI   C    + +A ++L+     G  P+ V
Sbjct: 289 KHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKV 348

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +Y  L++  CKQG+Y  A+ ++  +  RG +P+ +TY  L+H L   G  D    + + M
Sbjct: 349 SYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKM 408

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E    P    YN+L++GLCK G +  A     +M+ +N  PD     T++    + G  
Sbjct: 409 VEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDF 468

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA +L  L       P ++ YN +I G  K G M+ A++ + +M++   SPD+ T+ T+
Sbjct: 469 EEAKKLFELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTI 528

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G+ + + +  A+ +   + K   K     Y L+I+G C S  ++ A +  + M+S R 
Sbjct: 529 IDGYIKMNDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRL 588

Query: 534 KPDDTVFSTIV 544
           KP+   ++ ++
Sbjct: 589 KPNVVTYTILI 599



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 123/449 (27%), Positives = 216/449 (48%), Gaps = 2/449 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +L      GK+  A K+ D M  RN ++ ++  CI +++GL +  ++E   K+++   
Sbjct: 141 NSLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCI-MVKGLCKEGKVEDGWKLIEKRW 199

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G +P+ + YN ++ G CK+G    A  L  E+ + G  P V TY  I+      GKF+
Sbjct: 200 GRGCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFE 259

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
                  +   +G    +  Y  +I+   K      A + +  M   GC PD+ TYN L+
Sbjct: 260 VVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILI 319

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
             SC  G+   A  ++   + RG+ PN ++Y  L+H+   +G +     +L  M+E  H 
Sbjct: 320 TGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHK 379

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P + TY  LI+GL   G VD A+   N+MV K   PD   YN ++  LCK+G L  A  L
Sbjct: 380 PDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVL 439

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +   + +P      TL+DG  + G  E+A  L+   +E GI P  + +  +I G+C+
Sbjct: 440 LAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEKGIDPGVVGYNAMIKGYCK 499

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              +++A+   K + +  +      Y  +I G  K   +  A+++  LM+    KP+   
Sbjct: 500 FGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNVVT 559

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++ ++      G    A K +++++  ++
Sbjct: 560 YTLLINGFCLSGDINRAEKTFKQMLSLRL 588



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 124/475 (26%), Positives = 221/475 (46%), Gaps = 18/475 (3%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID-RIEKASKVLQ 176
           KT   I+  FC +GK     KL+  M+ R      H   N+I    +   RIE A  V  
Sbjct: 243 KTYGAIINGFCKKGKFEVVDKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTV-G 301

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M+ SG  PD  TYN+++ G C  G++  A  LL++    G  P+ ++Y  ++      G
Sbjct: 302 WMIKSGCDPDMATYNILITGSCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQG 361

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           ++ +A+        +G  P L+TY  LI  +     +  A+ V + M  +G  PD   YN
Sbjct: 362 EYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYN 421

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L++  CK+G+   A +++  +L + + P++    TL+      G ++   K+ ++  E 
Sbjct: 422 VLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIEK 481

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P V  YN +I G CK+G++  A+  F +M+     PD  TY+T++    K   L+ A
Sbjct: 482 GIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGA 541

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           L++  L+   +C P ++TY  LI+G    G + +A   + QM+   + P+ +T+  LI  
Sbjct: 542 LRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGC 601

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ-----------VL 525
           FC+   + +A    +++        +  Y  +++GL  +  VD  I            VL
Sbjct: 602 FCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGL--TNNVDFVISNQRSEQTENSLVL 659

Query: 526 E---LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           E   +MIS  +      +++I+  +    M + A  L  K++         +L+A
Sbjct: 660 ESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVA 714



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 103/399 (25%), Positives = 196/399 (49%), Gaps = 1/399 (0%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE-MSVSGCEPDVITYN 226
             +   +L+IM     +P    +++++      G +  A+      + +  C PDV + N
Sbjct: 82  FSEVESLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCN 141

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           ++L  +  +GK + A   + + + +       T  I+++ +CK+  +    ++++     
Sbjct: 142 SLLNVLVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGR 201

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           GC P+IV YN+L++  CK+G  + A ++   L  +G  P   TY  +++    +G ++ V
Sbjct: 202 GCMPNIVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVV 261

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           DK+L  M+E     ++  YN +I+   K+G    A ++   M+   C PD+ TYN ++  
Sbjct: 262 DKLLVEMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITG 321

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            C  G +++A QLL         P  ++Y  LI    K+G   +A+ L  +M E G  PD
Sbjct: 322 SCSCGEVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPD 381

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+  LI G   A +V+ A+ +  ++ ++G     + Y +++ GLCK  ++  A  +L 
Sbjct: 382 LVTYAALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLA 441

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            M+     PD  + +T+V      G  EEA KL++  IE
Sbjct: 442 EMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLFELTIE 480



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 112/455 (24%), Positives = 196/455 (43%), Gaps = 47/455 (10%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ N+C +G+   A  L+  M+ R   PD      LI GLI    ++ A  V   MV  G
Sbjct: 353 LIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYAALIHGLIVAGEVDVALTVRNKMVEKG 412

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD   YN+++ GLCK+G++ +A  LL EM      PD     T++     +G F++A 
Sbjct: 413 VLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAK 472

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             ++  + KG                                     P +V YN+++   
Sbjct: 473 KLFELTIEKGI-----------------------------------DPGVVGYNAMIKGY 497

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G   DA+L    ++     P+  TY+T++             ++  +M + +  P V
Sbjct: 498 CKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKMNDLHGALRMFGLMVKGACKPNV 557

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY +LING C  G ++RA  +F QM+S   +P++VTY  ++G  CK   L +A      
Sbjct: 558 VTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTYTILIGCFCKGVNLTKACSFFEQ 617

Query: 423 LNGSSCSPCLITYNTLIDGLA----------KKGCMEKAMVL--YGQMMENGISPDDITH 470
           +    C P  +TYN L++GL           +    E ++VL  +G M+ +G      ++
Sbjct: 618 MLMEKCLPNDVTYNYLMNGLTNNVDFVISNQRSEQTENSLVLESFGMMISDGWDRRAASY 677

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +++   C+   V+ A+ L  ++  +G      +   ++HGLC   +      V+   ++
Sbjct: 678 NSILICLCQHKMVKHALHLRDKMMSKGFLPDPVSLVALLHGLCLEGRSQDWNNVISCKLN 737

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            R       +S  +      G T EA  +   L +
Sbjct: 738 ERELQVAVKYSEKLDAFLSQGQTSEASLILHSLAD 772



 Score =  138 bits (348), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 166/362 (45%), Gaps = 1/362 (0%)

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGCPPYLITYTILIEQ 266
           +LL  M      P    ++ ++    D G   +A+ F++  ++   C P + +   L+  
Sbjct: 87  SLLKIMKSKDLMPTREAFSLVISVFADCGLVDRALEFYRTFIKIHHCVPDVFSCNSLLNV 146

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           + K   +  A +V D+M       D  T   +V   CK+GK +D   +I     RG  PN
Sbjct: 147 LVKHGKVEIACKVYDEMVDRNGEVDNYTVCIMVKGLCKEGKVEDGWKLIEKRWGRGCMPN 206

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
            + YNTL+     +G  +  + +   +      PTV TY  +ING CK G  +       
Sbjct: 207 IVFYNTLIDGYCKKGDTERANVLFKELKMKGFLPTVKTYGAIINGFCKKGKFEVVDKLLV 266

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M  +     I  YN ++ A  K G   EA   +  +  S C P + TYN LI G    G
Sbjct: 267 EMSERGLDVSIHIYNNIIDAQFKHGCRIEAADTVGWMIKSGCDPDMATYNILITGSCSCG 326

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            + KA  L  Q ++ G+ P+ +++  LI  +C+  +   A+DLL ++ +RG+K     Y 
Sbjct: 327 EVHKAEQLLEQAIKRGLLPNKVSYTPLIHNYCKQGEYLRALDLLIKMSERGHKPDLVTYA 386

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            +IHGL  + +VD+A+ V   M+     PD  +++ ++  +   G    A  L  ++++ 
Sbjct: 387 ALIHGLIVAGEVDVALTVRNKMVEKGVLPDANIYNVLMSGLCKKGRLPAAKVLLAEMLDQ 446

Query: 567 KV 568
            V
Sbjct: 447 NV 448



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 85/313 (27%), Positives = 139/313 (44%), Gaps = 22/313 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N ++   C +G+L  A  L+  M  +N  PD      L+ G IR    E+A K+ 
Sbjct: 416 DANIYNVLMSGLCKKGRLPAAKVLLAEMLDQNVAPDAFITATLVDGFIRHGDFEEAKKLF 475

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++ +  G  P  + YN M+ G CK G ++ A+     M      PD  TY+TI+      
Sbjct: 476 ELTIEKGIDPGVVGYNAMIKGYCKFGMMKDALLCFKRMIQGLHSPDEFTYSTIIDGYIKM 535

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A+  +   ++  C P ++TYT+LI   C    I RA +    M      P++VTY
Sbjct: 536 NDLHGALRMFGLMVKGACKPNVVTYTLLINGFCLSGDINRAEKTFKQMLSLRLKPNVVTY 595

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL-DIMN 354
             L+   CK      A      +L     PN +TYN L++ L +      VD ++ +  +
Sbjct: 596 TILIGCFCKGVNLTKACSFFEQMLMEKCLPNDVTYNYLMNGLTNN-----VDFVISNQRS 650

Query: 355 EASHSPTVF----------------TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
           E + +  V                 +YN ++  LC++ +V  A++  ++M+SK   PD V
Sbjct: 651 EQTENSLVLESFGMMISDGWDRRAASYNSILICLCQHKMVKHALHLRDKMMSKGFLPDPV 710

Query: 399 TYNTVLGALCKEG 411
           +   +L  LC EG
Sbjct: 711 SLVALLHGLCLEG 723


>gi|302755068|ref|XP_002960958.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
 gi|300171897|gb|EFJ38497.1| hypothetical protein SELMODRAFT_70262 [Selaginella moellendorffii]
          Length = 479

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/407 (29%), Positives = 194/407 (47%), Gaps = 6/407 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L++ L R  +I+KA   +  M     VPD  TYN+++  LCK  +I  AI   + M    
Sbjct: 41  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP--- 97

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            EPDV+TYNT+L  +  NG+  QA   +      G  P  +TYT LI+  CK C    A 
Sbjct: 98  -EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 156

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L  MA   CSP + +Y S++N  CK  K D A  +   +   G +P+ +TYNTL+H L
Sbjct: 157 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 216

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             +        +L +M E    P   T+  LI GLC    +  A   F  M  + C PD+
Sbjct: 217 CVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDL 276

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VT+  ++  LC    L  AL ++   N  +C   +I Y  +   L ++   ++A  L  +
Sbjct: 277 VTHTVLVSKLCILRKLRPALSVVR--NYPACPEAVILYTPIFRELGRRRGFDRAARLLQK 334

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M   G+ P+ +T+     G     +   A    + + ++G +    AY +++ G CK+ +
Sbjct: 335 MARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADR 394

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +DMA +++  M  S   P+   ++T+V      G  E   +L   ++
Sbjct: 395 LDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMV 441



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/437 (25%), Positives = 210/437 (48%), Gaps = 6/437 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C  GK+  A   I  MAR   +PD      +I  L +  RI +A +  + M    
Sbjct: 41  LVKALCRTGKIDKACSTIAEMAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETM---- 96

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TYN ++GGLCK G++  A +L   M  +G  P  +TY T++       +F+ A 
Sbjct: 97  PEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAY 156

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G  +    + C P + +Y  +I  +CK   + +A ++ ++M + GC PD VTYN+L++  
Sbjct: 157 GLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGL 216

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C + +  +A  ++  ++  G +P+ IT+  L+  L +         +   M +   +P +
Sbjct: 217 CVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDL 276

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+ +L++ LC    +  A++      +  C   ++ Y  +   L +    + A +LL  
Sbjct: 277 VTHTVLVSKLCILRKLRPALSVVRNYPA--CPEAVILYTPIFRELGRRRGFDRAARLLQK 334

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P ++TY     GL       +A   + +M+E GI PD + +  L+ GFC+AD+
Sbjct: 335 MARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADR 394

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++ A  +++ + + G       Y  ++   C+  KV+   ++L  M+S   +PD   +ST
Sbjct: 395 LDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWST 454

Query: 543 IVKKVADDGMTEEAYKL 559
           +V  +   G  + AY  
Sbjct: 455 LVAGLFMVGQADAAYSF 471



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/377 (29%), Positives = 173/377 (45%), Gaps = 2/377 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N +L   C  G++  A  L   M      P       LI    ++ + E A  
Sbjct: 98  EPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYG 157

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +LQ+M      P   +Y  ++ GLCK  ++  A  L +EM ++GC+PD +TYNT++  + 
Sbjct: 158 LLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLC 217

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              +  +A       +  G  P  IT+T LIE +C    I  A  +   MA +GC+PD+V
Sbjct: 218 VKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLV 277

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+  LV+  C   K   A+ V+ N  +       I Y  +   LG R  +D   ++L  M
Sbjct: 278 THTVLVSKLCILRKLRPALSVVRNYPA--CPEAVILYTPIFRELGRRRGFDRAARLLQKM 335

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P V TY     GL  +    RA   F +M+ +  +PD+V YN ++   CK   L
Sbjct: 336 ARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCKADRL 395

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A +++  ++ S   P ++TYNTL+    +KG +E    L   M+  G  PD  T  TL
Sbjct: 396 DMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVATWSTL 455

Query: 474 IWGFCRADQVEEAVDLL 490
           + G     Q + A   L
Sbjct: 456 VAGLFMVGQADAAYSFL 472



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 190/378 (50%), Gaps = 6/378 (1%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +T N ++  L +  +    + +   +    C+P+ ++Y  +++ +   GK  +A     +
Sbjct: 1   VTCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAE 60

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
             R+   P + TY ++I+ +CK   I+RAIE  + M      PD+VTYN+L+   CK G+
Sbjct: 61  MAREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMP----EPDVVTYNTLLGGLCKNGR 116

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
              A  +  ++   G+ P+ +TY TL+        ++    +L +M     SPTV++Y  
Sbjct: 117 VAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFETAYGLLQLMASRKCSPTVYSYCS 176

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +INGLCK   VD+A   F +M    C+PD VTYNT++  LC +  L+EA  LL ++  + 
Sbjct: 177 IINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLIHGLCVKQRLHEAKDLLTVMVENG 236

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P  IT+  LI+GL     +++A VL+  M + G +PD +TH  L+   C   ++  A+
Sbjct: 237 FQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCAPDLVTHTVLVSKLCILRKLRPAL 296

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            +++        +    Y  +   L + +  D A ++L+ M      P+   ++   K +
Sbjct: 297 SVVRNYPACPEAV--ILYTPIFRELGRRRGFDRAARLLQKMARRGVPPNVVTYTAFFKGL 354

Query: 548 ADDGMTEEAYKLWQKLIE 565
            D      AY+ +++++E
Sbjct: 355 GDWKEGMRAYREFRRMLE 372



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 100/388 (25%), Positives = 181/388 (46%), Gaps = 4/388 (1%)

Query: 77  EWSSESHVLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNKILQNFCSRGKLT 134
           E   E  V+  N  L GL    +         S +G  +   + T   ++  FC   +  
Sbjct: 94  ETMPEPDVVTYNTLLGGLCKNGRVAQACSLFGSMEGAGITPSDVTYTTLIDVFCKMCQFE 153

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
            A  L+ +MA R   P  +   ++I GL +  ++++A ++ + M ++G  PD +TYN ++
Sbjct: 154 TAYGLLQLMASRKCSPTVYSYCSIINGLCKNRKVDQAYQLFEEMKLAGCKPDRVTYNTLI 213

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            GLC + ++  A  LL  M  +G +PD IT+  ++  +    + K+A   ++   ++GC 
Sbjct: 214 HGLCVKQRLHEAKDLLTVMVENGFQPDKITFTALIEGLCTTDRIKEAFVLFQGMAKQGCA 273

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P L+T+T+L+ ++C    +  A+ V+ +     C   ++ Y  +     ++  +D A  +
Sbjct: 274 PDLVTHTVLVSKLCILRKLRPALSVVRNYP--ACPEAVILYTPIFRELGRRRGFDRAARL 331

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +  +  RG+ PN +TY      LG         +    M E    P +  YN+L++G CK
Sbjct: 332 LQKMARRGVPPNVVTYTAFFKGLGDWKEGMRAYREFRRMLEQGIEPDMVAYNVLVDGFCK 391

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
              +D A      M      P+IVTYNT++G  C++G +    +LLH +      P + T
Sbjct: 392 ADRLDMAEKMVRYMDQSGLPPNIVTYNTLVGHHCRKGKVEAIGELLHTMVSRGRQPDVAT 451

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++TL+ GL   G  + A       M  G
Sbjct: 452 WSTLVAGLFMVGQADAAYSFLNLAMSQG 479



 Score = 59.3 bits (142), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 46/204 (22%), Positives = 86/204 (42%), Gaps = 39/204 (19%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           T N L++ L +    ++ +  F ++ S++C+P+ ++Y  ++ ALC+ G +++A   +  +
Sbjct: 2   TCNALLDLLERARRSEQIVVVFRRIFSQDCKPNALSYCYLVKALCRTGKIDKACSTIAEM 61

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P + TYN +ID L K   + +A+  +  M E    PD +T+ TL+         
Sbjct: 62  AREKLVPDVFTYNVVIDTLCKARRISRAIEFFETMPE----PDVVTYNTLLG-------- 109

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
                                      GLCK+ +V  A  +   M  +   P D  ++T+
Sbjct: 110 ---------------------------GLCKNGRVAQACSLFGSMEGAGITPSDVTYTTL 142

Query: 544 VKKVADDGMTEEAYKLWQKLIEWK 567
           +         E AY L Q +   K
Sbjct: 143 IDVFCKMCQFETAYGLLQLMASRK 166


>gi|255540069|ref|XP_002511099.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223550214|gb|EEF51701.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1151

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 139/472 (29%), Positives = 217/472 (45%), Gaps = 36/472 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+   C  G LT A++L   M      P+      +++GL++  R E+A K+L +M   G
Sbjct: 448 IVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQG 507

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD   YN ++ G CK G++    + L EM   G +P+V TY   +      G+ + A 
Sbjct: 508 LSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAE 567

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + + L  G  P  +  T LI+  CK     +A      M  +G  PD+ T++ L++  
Sbjct: 568 RSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGL 627

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K GK  +A+ V + LL +G+ P+  TY +L+ +L   G   A  ++ D M +   +P +
Sbjct: 628 SKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNI 687

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN LINGLCK G + +A   F+ +  K    + VTY+T++   CK   L EA QL H 
Sbjct: 688 VTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHG 747

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-------------------- 462
           +      P    Y  LIDG  K G  EKA+ L+  M+E G                    
Sbjct: 748 MKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKL 807

Query: 463 --------------ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRL 507
                         I+P+ +T+  LI   C    ++EA  L  E+ KR N M N   Y  
Sbjct: 808 IEAYQLVEDMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKR-NVMPNVLTYTS 866

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           ++HG  +  +      + + M++   KPDD  +S +V     +G   +A KL
Sbjct: 867 LLHGYNRIGRRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKL 918



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 221/478 (46%), Gaps = 35/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC + + T+   ++D M      PD      LI G ++   I  A +V + M    
Sbjct: 308 LIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARK 367

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF--------- 233
              +T TY  ++ GLCK G +  A  L  EM++ G +PD+ TYN ++   +         
Sbjct: 368 IKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAY 427

Query: 234 --------DN------------------GKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
                   +N                  G   +A   +++ +  G  P ++ YT +++ +
Sbjct: 428 ELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGL 487

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
            K+     AI++L  M  +G SPD+  YN+++   CK GK ++    +  ++++G++PN 
Sbjct: 488 VKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNV 547

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
            TY   +H     G   A ++    M ++  +P       LI+G CK G   +A   F  
Sbjct: 548 YTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRC 607

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M+ +   PD+ T++ ++  L K G L EA+ +   L      P + TY +LI  L K+G 
Sbjct: 608 MLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGD 667

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           ++ A  L+  M + GI+P+ +T+  LI G C+  ++ +A +L   I ++G    +  Y  
Sbjct: 668 LKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKARELFDGIPEKGLARNSVTYST 727

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +I G CKS  +  A Q+   M      PD  V+  ++      G TE+A  L+  ++E
Sbjct: 728 IIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGCCKAGNTEKALSLFLGMVE 785



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 212/441 (48%), Gaps = 3/441 (0%)

Query: 130 RGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           +G L +A  +  + A+ N+ I     C +L + L++ +R+E   KV + M +   VPD  
Sbjct: 176 KGFLNEAVSVF-LGAKTNEFIVGLACCNSLSKDLLKGNRVELFWKVYKGM-LGAIVPDVY 233

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TY  ++   C+ G++     +L +M   GC P+++TY+ ++  +   G   +A+   +  
Sbjct: 234 TYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALELKRSM 293

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
             KG  P    Y  LI+  C+Q        +LD+M   G  PD V Y +L+N   KQ   
Sbjct: 294 ANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFVKQSDI 353

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             A  V   + +R ++ N+ TY  L+H L   G  +  + +   M      P + TYN L
Sbjct: 354 GGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQTYNCL 413

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I G  K   +++A     ++  +N   +      ++  LC  G L  A +L   +     
Sbjct: 414 IEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEMISWGL 473

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P ++ Y T++ GL K+G  E+A+ + G M + G+SPD   + T+I GFC+A ++EE   
Sbjct: 474 KPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKMEEGKS 533

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
            L E+  +G K     Y   IHG C++ ++  A +    M+ S   P+D + + ++    
Sbjct: 534 YLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDLIDGYC 593

Query: 549 DDGMTEEAYKLWQKLIEWKVF 569
            DG T +A+  ++ +++  V 
Sbjct: 594 KDGNTTKAFAKFRCMLDQGVL 614



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 110/417 (26%), Positives = 197/417 (47%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +PD +   NLI    R+ ++E+   VL  M   G +P+ +TY++++ GLC+ G +  A+ 
Sbjct: 229 VPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLVTYSVVIAGLCRAGDVDEALE 288

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           L   M+  G  PD   Y T++       +  +      +    G  P  + YT LI    
Sbjct: 289 LKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEMYTMGLKPDHVAYTALINGFV 348

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           KQ  I  A +V ++M       +  TY +L++  CK G  + A  + + +   G++P+  
Sbjct: 349 KQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDLEKAEDLFSEMTMMGIKPDIQ 408

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TYN L+         +   ++L  + + + +   +    ++NGLC  G + RA   F +M
Sbjct: 409 TYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAIVNGLCHCGDLTRANELFQEM 468

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           +S   +P+IV Y T++  L KEG   EA+++L ++     SP +  YNT+I G  K G M
Sbjct: 469 ISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGLSPDVFCYNTVIIGFCKAGKM 528

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E+      +M+  G+ P+  T+   I G+CRA +++ A     E+   G    +     +
Sbjct: 529 EEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLDSGIAPNDVICTDL 588

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           I G CK      A      M+     PD    S ++  ++ +G  +EA  ++ +L++
Sbjct: 589 IDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLD 645



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 215/478 (44%), Gaps = 34/478 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  GK+ +    +  M  +   P+ +     I G  R   ++ A +    M+ 
Sbjct: 516 NTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAERSFIEMLD 575

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           SG  P+ +    ++ G CK G    A A    M   G  PDV T++ ++  +  NGK ++
Sbjct: 576 SGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQE 635

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+G + + L KG  P + TYT LI  +CK+  +  A E+ DDM  +G +P+IVTYN+L+N
Sbjct: 636 AMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALIN 695

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+   A  + + +  +G+  NS+TY+T++             ++   M      P
Sbjct: 696 GLCKLGEIAKARELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPP 755

Query: 361 TVFTYNILINGLCKYGLVDRAINSF----------------------------------N 386
             F Y  LI+G CK G  ++A++ F                                   
Sbjct: 756 DSFVYCALIDGCCKAGNTEKALSLFLGMVEEGIASTPAFNALIDGFFKLGKLIEAYQLVE 815

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            MV  +  P+ VTY  ++   C  G + EA QL   +   +  P ++TY +L+ G  + G
Sbjct: 816 DMVDNHITPNHVTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIG 875

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
              +   L+ +M+  GI PDD+    ++    +     +A+ L+ ++   G  +  + Y 
Sbjct: 876 RRSEMFSLFDEMVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYT 935

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           ++I  LCK   +   ++VL+ +     K       T+V      G T+EA ++ + ++
Sbjct: 936 ILIDALCKHNNLSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMV 993



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 205/447 (45%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C  G + +A +L   MA +  +PD +    LI G  R  R  +   +L  M
Sbjct: 269 TYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEM 328

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD + Y  ++ G  K+  I  A  + +EM     + +  TY  ++  +   G  
Sbjct: 329 YTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKIKLNTFTYYALIHGLCKIGDL 388

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A   + +    G  P + TY  LIE   K   + +A E+L ++  E  + +     ++
Sbjct: 389 EKAEDLFSEMTMMGIKPDIQTYNCLIEGYYKVQNMEKAYELLIEIKKENLTANAYMCGAI 448

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  C  G    A  +   ++S G++PN + Y T++  L   G ++   KIL +M +   
Sbjct: 449 VNGLCHCGDLTRANELFQEMISWGLKPNIVIYTTIVKGLVKEGRFEEAIKILGVMKDQGL 508

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP VF YN +I G CK G ++   +   +M++K  +P++ TY   +   C+ G +  A +
Sbjct: 509 SPDVFCYNTVIIGFCKAGKMEEGKSYLVEMIAKGLKPNVYTYGAFIHGYCRAGEMQAAER 568

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               +  S  +P  +    LIDG  K G   KA   +  M++ G+ PD  TH  LI G  
Sbjct: 569 SFIEMLDSGIAPNDVICTDLIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLS 628

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +++EA+ +  E+  +G       Y  +I  LCK   +  A ++ + M      P+  
Sbjct: 629 KNGKLQEAMGVFSELLDKGLVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIV 688

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++ ++  +   G   +A +L+  + E
Sbjct: 689 TYNALINGLCKLGEIAKARELFDGIPE 715



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 194/409 (47%), Gaps = 1/409 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C  G  T A      M  +  +PD      LI GL +  ++++A  V   ++  G
Sbjct: 588 LIDGYCKDGNTTKAFAKFRCMLDQGVLPDVQTHSVLIHGLSKNGKLQEAMGVFSELLDKG 647

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD  TY  ++  LCK G +++A  L D+M   G  P+++TYN ++  +   G+  +A 
Sbjct: 648 LVPDVFTYTSLISNLCKEGDLKAAFELHDDMCKKGINPNIVTYNALINGLCKLGEIAKAR 707

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +     KG     +TY+ +I   CK   +  A ++   M + G  PD   Y +L++  
Sbjct: 708 ELFDGIPEKGLARNSVTYSTIIAGYCKSANLTEAFQLFHGMKLVGVPPDSFVYCALIDGC 767

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G  + A+ +   ++  G+  ++  +N L+      G      ++++ M +   +P  
Sbjct: 768 CKAGNTEKALSLFLGMVEEGI-ASTPAFNALIDGFFKLGKLIEAYQLVEDMVDNHITPNH 826

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY ILI   C  G +  A   F +M  +N  P+++TY ++L    + G  +E   L   
Sbjct: 827 VTYTILIEYHCTVGNIKEAEQLFMEMQKRNVMPNVLTYTSLLHGYNRIGRRSEMFSLFDE 886

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  + ++ ++D   K+G   KA+ L   M+  G++     +  LI   C+ + 
Sbjct: 887 MVARGIKPDDLAWSVMVDAHLKEGNWIKALKLVDDMLSEGVNVCKNLYTILIDALCKHNN 946

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           + E + +L E+ K+G+K+  +    ++    ++ + D A++VLE M+ S
Sbjct: 947 LSEVLKVLDEVEKQGSKLSLATCGTLVCCFHRAGRTDEALRVLESMVRS 995



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/280 (22%), Positives = 125/280 (44%), Gaps = 15/280 (5%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           S ++ T++ L    C  G + +A     N+L R ++  +     L          D++ K
Sbjct: 104 SQNLSTFSILSLILCNSGLFGNAA----NVLERMIDTRNPHVKIL----------DSIIK 149

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
               +N +S S +V  + ILI+   K G ++ A++ F    +      +   N++   L 
Sbjct: 150 CYKEINGSSSSSSVVVFEILIDIYRKKGFLNEAVSVFLGAKTNEFIVGLACCNSLSKDLL 209

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K   +    ++   + G+   P + TY  LI+   + G +E+   +   M E G  P+ +
Sbjct: 210 KGNRVELFWKVYKGMLGA-IVPDVYTYTNLINAYCRVGKVEEGKHVLFDMEEKGCIPNLV 268

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  +I G CRA  V+EA++L + +  +G    N  Y  +I G C+ K+      +L+ M
Sbjct: 269 TYSVVIAGLCRAGDVDEALELKRSMANKGLLPDNYIYATLIDGFCRQKRSTEGKSMLDEM 328

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            +   KPD   ++ ++           A+++ +++   K+
Sbjct: 329 YTMGLKPDHVAYTALINGFVKQSDIGGAFQVKEEMFARKI 368


>gi|15234269|ref|NP_192906.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75213756|sp|Q9T0D6.1|PP306_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g11690
 gi|4539460|emb|CAB39940.1| putative protein [Arabidopsis thaliana]
 gi|7267869|emb|CAB78212.1| putative protein [Arabidopsis thaliana]
 gi|91806660|gb|ABE66057.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332657639|gb|AEE83039.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 566

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 120/396 (30%), Positives = 198/396 (50%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI+G      IEK+  +L  +   G  P+ + Y  ++ G CK+G+I  A  L  EM   G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              +  TY  ++  +F NG  KQ    ++     G  P L TY  ++ Q+CK      A 
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +V D+M   G S +IVTYN+L+   C++ K ++A  V++ + S G+ PN ITYNTL+   
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G       +   +     SP++ TYNIL++G C+ G    A     +M  +  +P  
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTY  ++    +   + +A+QL   +      P + TY+ LI G   KG M +A  L+  
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+E    P+++ + T+I G+C+      A+ LLKE+ ++      ++YR +I  LCK +K
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
              A +++E MI S   P  ++ S I +   D  ++
Sbjct: 529 SKEAERLVEKMIDSGIDPSTSILSLISRAKNDSHVS 564



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 197/382 (51%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           V D  ++ +++ G C+ G+I  +  LL E++  G  P+V+ Y T++      G+ ++A  
Sbjct: 160 VLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            + +  + G      TYT+LI  + K     +  E+ + M  +G  P++ TYN ++N  C
Sbjct: 220 LFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLC 279

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K G+  DA  V + +  RG+  N +TYNTL+  L      +  +K++D M     +P + 
Sbjct: 280 KDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLI 339

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN LI+G C  G + +A++    + S+   P +VTYN ++   C++G  + A +++  +
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEM 399

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P  +TY  LID  A+   MEKA+ L   M E G+ PD  T+  LI GFC   Q+
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQM 459

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            EA  L K + ++  +     Y  +I G CK      A+++L+ M      P+   +  +
Sbjct: 460 NEASRLFKSMVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYM 519

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           ++ +  +  ++EA +L +K+I+
Sbjct: 520 IEVLCKERKSKEAERLVEKMID 541



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 191/376 (50%), Gaps = 1/376 (0%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++    +   +  +I+  +EM  +G  P    +N +L  +  +  F Q   F+ +  
Sbjct: 97  YEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFVVGSSSFNQWWSFFNENK 156

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            K     + ++ ILI+  C+   I ++ ++L ++   G SP++V Y +L++  CK+G+ +
Sbjct: 157 SKVVLD-VYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A  +   +   G+  N  TY  L++ L   G      ++ + M E    P ++TYN ++
Sbjct: 216 KAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVM 275

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           N LCK G    A   F++M  +    +IVTYNT++G LC+E  LNEA +++  +     +
Sbjct: 276 NQLCKDGRTKDAFQVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGIN 335

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P LITYNTLIDG    G + KA+ L   +   G+SP  +T+  L+ GFCR      A  +
Sbjct: 336 PNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKM 395

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           +KE+ +RG K     Y ++I    +S  ++ AIQ+   M      PD   +S ++     
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCI 455

Query: 550 DGMTEEAYKLWQKLIE 565
            G   EA +L++ ++E
Sbjct: 456 KGQMNEASRLFKSMVE 471



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 191/375 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C  G++  +  L+  +      P+      LI G  +   IEKA  +   M   G
Sbjct: 169 LIKGCCEAGEIEKSFDLLIELTEFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKLG 228

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V +  TY +++ GL K G  +    + ++M   G  P++ TYN ++  +  +G+ K A 
Sbjct: 229 LVANERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAF 288

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   +G    ++TY  LI  +C++  +  A +V+D M  +G +P+++TYN+L++  
Sbjct: 289 QVFDEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGF 348

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  GK   A+ +  +L SRG+ P+ +TYN L+     +G      K++  M E    P+ 
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY ILI+   +   +++AI     M      PD+ TY+ ++   C +G +NEA +L   
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +   +C P  + YNT+I G  K+G   +A+ L  +M E  ++P+  ++R +I   C+  +
Sbjct: 469 MVEKNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERK 528

Query: 483 VEEAVDLLKEIGKRG 497
            +EA  L++++   G
Sbjct: 529 SKEAERLVEKMIDSG 543



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/315 (25%), Positives = 150/315 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E+T   ++      G      ++ + M      P+ +    ++  L +  R + A +V 
Sbjct: 232 NERTYTVLINGLFKNGVKKQGFEMYEKMQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVF 291

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G   + +TYN ++GGLC+  ++  A  ++D+M   G  P++ITYNT++      
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKLNEANKVVDQMKSDGINPNLITYNTLIDGFCGV 351

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A+   +D   +G  P L+TY IL+   C++   + A +++ +M   G  P  VTY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L++   +    + A+ +  ++   G+ P+  TY+ L+H    +G  +   ++   M E
Sbjct: 412 TILIDTFARSDNMEKAIQLRLSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P    YN +I G CK G   RA+    +M  K   P++ +Y  ++  LCKE    E
Sbjct: 472 KNCEPNEVIYNTMILGYCKEGSSYRALKLLKEMEEKELAPNVASYRYMIEVLCKERKSKE 531

Query: 416 ALQLLHLLNGSSCSP 430
           A +L+  +  S   P
Sbjct: 532 AERLVEKMIDSGIDP 546



 Score = 84.3 bits (207), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 57/221 (25%), Positives = 110/221 (49%), Gaps = 2/221 (0%)

Query: 349 ILDIMNEASHSPTVFT-YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +L  + E+  S T F  Y ++IN   +   ++ +I+ FN+MV     P    +N +L  +
Sbjct: 80  LLHYLTESETSKTKFRLYEVIINSYVQSQSLNLSISYFNEMVDNGFVPGSNCFNYLLTFV 139

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
                 N+     +  N S     + ++  LI G  + G +EK+  L  ++ E G SP+ 
Sbjct: 140 VGSSSFNQWWSFFN-ENKSKVVLDVYSFGILIKGCCEAGEIEKSFDLLIELTEFGFSPNV 198

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           + + TLI G C+  ++E+A DL  E+GK G       Y ++I+GL K+       ++ E 
Sbjct: 199 VIYTTLIDGCCKKGEIEKAKDLFFEMGKLGLVANERTYTVLINGLFKNGVKKQGFEMYEK 258

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           M      P+   ++ ++ ++  DG T++A++++ ++ E  V
Sbjct: 259 MQEDGVFPNLYTYNCVMNQLCKDGRTKDAFQVFDEMRERGV 299


>gi|15231438|ref|NP_187385.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75204605|sp|Q9SFV9.1|PP218_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At3g07290, mitochondrial; Flags: Precursor
 gi|6642636|gb|AAF20217.1|AC012395_4 hypothetical protein [Arabidopsis thaliana]
 gi|332641002|gb|AEE74523.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 880

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 130/451 (28%), Positives = 221/451 (49%), Gaps = 1/451 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARR-NQIPDFHFCINLIRGLIRIDRIEKASKV 174
           D      +L  FC    L DA K+ D+M++     P+      LI GL  + R+E+A  +
Sbjct: 229 DSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGL 288

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              M   G  P T TY +++  LC RG I  A  L DEM   GC+P+V TY  ++  +  
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCR 348

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +GK ++A G  +  ++    P +ITY  LI   CK   +  A E+L  M    C P++ T
Sbjct: 349 DGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +N L+   C+ GK   AV ++  +L  G+ P+ ++YN L+  L   G  +   K+L  MN
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMN 468

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P   T+  +IN  CK G  D A      M+ K    D VT  T++  +CK G   
Sbjct: 469 CFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTR 528

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +AL +L  L          + N ++D L+K   +++ + + G++ + G+ P  +T+ TL+
Sbjct: 529 DALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLV 588

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G  R+  +  +  +L+ +   G       Y ++I+GLC+  +V+ A ++L  M  S   
Sbjct: 589 DGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           P+   ++ +VK   ++G  + A +  + ++E
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVE 679



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 123/429 (28%), Positives = 216/429 (50%), Gaps = 42/429 (9%)

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILR 230
           SK+L+I    G V D+     ++ G C+   +R A+ + D MS    C P+ ++Y+ ++ 
Sbjct: 219 SKILKI----GFVLDSHIGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIH 274

Query: 231 TMFDNGKFKQAIGFWKDQL-RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
            + + G+ ++A G  KDQ+  KGC P   TYT+LI+ +C +  I +A  + D+M   GC 
Sbjct: 275 GLCEVGRLEEAFGL-KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCK 333

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++ TY  L++  C+ GK ++A  V   ++   + P+ ITYN L++     G      ++
Sbjct: 334 PNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIFPSVITYNALINGYCKDGRVVPAFEL 393

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L +M + +  P V T+N L+ GLC+ G   +A++   +M+     PDIV+YN ++  LC+
Sbjct: 394 LTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCR 453

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           EG +N A +LL  +N     P  +T+  +I+   K+G  + A    G M+  GIS D++T
Sbjct: 454 EGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVT 513

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGK------------------RGNKMRNS-------- 503
             TLI G C+  +  +A+ +L+ + K                  +G K++          
Sbjct: 514 GTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKIN 573

Query: 504 ---------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
                     Y  ++ GL +S  +  + ++LELM  S   P+   ++ I+  +   G  E
Sbjct: 574 KLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVE 633

Query: 555 EAYKLWQKL 563
           EA KL   +
Sbjct: 634 EAEKLLSAM 642



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/470 (26%), Positives = 233/470 (49%), Gaps = 18/470 (3%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T   +++  C RG +  A  L D M  R   P+ H    LI GL R  +IE+A+ V + 
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV     P  ITYN ++ G CK G++  A  LL  M    C+P+V T+N ++  +   GK
Sbjct: 362 MVKDRIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+   K  L  G  P +++Y +LI+ +C++  +  A ++L  M      PD +T+ +
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTA 481

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++N  CKQGK D A   +  +L +G+  + +T  TL+  +   G       IL+ + +  
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMR 541

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
              T  + N++++ L K   V   +    ++      P +VTY T++  L + G +  + 
Sbjct: 542 ILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSF 601

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++L L+  S C P +  Y  +I+GL + G +E+A  L   M ++G+SP+ +T+  ++ G+
Sbjct: 602 RILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK-VDMAIQVLELMISSRYKPD 536
               +++ A++ ++ + +RG ++ +  Y  ++ G   S+K +D + +     I+ R    
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDP 721

Query: 537 DTVFSTI-----------------VKKVADDGMTEEAYKLWQKLIEWKVF 569
           + +   I                 V ++  +G T+E+  L Q ++E  VF
Sbjct: 722 ECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDESNDLVQNVLERGVF 771



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 103/358 (28%), Positives = 182/358 (50%), Gaps = 1/358 (0%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           M   G    +I Y TI+  +  NG  + A  F    L+ G        T L+   C+   
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKILKIGFVLDSHIGTSLLLGFCRGLN 245

Query: 273 IARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
           +  A++V D M+ E  C+P+ V+Y+ L++  C+ G+ ++A  + + +  +G +P++ TY 
Sbjct: 246 LRDALKVFDVMSKEVTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            L+ +L  RG  D    + D M      P V TY +LI+GLC+ G ++ A     +MV  
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIPRGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              P ++TYN ++   CK+G +  A +LL ++   +C P + T+N L++GL + G   KA
Sbjct: 366 RIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           + L  +M++NG+SPD +++  LI G CR   +  A  LL  +     +     +  +I+ 
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINA 485

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            CK  K D+A   L LM+      D+   +T++  V   G T +A  + + L++ ++ 
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRIL 543



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 114/471 (24%), Positives = 210/471 (44%), Gaps = 63/471 (13%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++  A +L+ +M +R   P+      L+ GL R+ +  KA  +L+ M
Sbjct: 373 TYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRM 432

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G  PD ++YN+++ GLC+ G + +A  LL  M+    EPD +T+  I+      GK 
Sbjct: 433 LDNGLSPDIVSYNVLIDGLCREGHMNTAYKLLSSMNCFDIEPDCLTFTAIINAFCKQGKA 492

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD----------------- 281
             A  F    LRKG     +T T LI+ VCK      A+ +L+                 
Sbjct: 493 DVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDALFILETLVKMRILTTPHSLNVI 552

Query: 282 -DMAIEGCS-----------------PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
            DM  +GC                  P +VTY +LV+   + G    +  ++  +   G 
Sbjct: 553 LDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDITGSFRILELMKLSGC 612

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN   Y  +++ L   G  +  +K+L  M ++  SP   TY +++ G    G +DRA+ 
Sbjct: 613 LPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGYVNNGKLDRALE 672

Query: 384 SFNQMVSKNCQPDIVTYNTVLGA--LCKEGM--------------------LNEALQLLH 421
           +   MV +  + +   Y+++L    L ++G+                    +NE + ++ 
Sbjct: 673 TVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTVSDIALRETDPECINELISVVE 732

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L G     C+     L+  L K+G  +++  L   ++E G+  +      ++  +C   
Sbjct: 733 QLGGCISGLCIF----LVTRLCKEGRTDESNDLVQNVLERGVFLEK-AMDIIMESYCSKK 787

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ-VLELMISS 531
           +  + ++L+  + K G      ++ LVI GL K    + A + V+EL+ S+
Sbjct: 788 KHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERARELVMELLTSN 838



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 87/373 (23%), Positives = 165/373 (44%), Gaps = 26/373 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T   I+  FC +GK   AS  + +M R+    D      LI G+ ++ +   A 
Sbjct: 472 IEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCKVGKTRDAL 531

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ +V    +    + N+++  L K  +++  +A+L +++  G  P V+TY T++  +
Sbjct: 532 FILETLVKMRILTTPHSLNVILDMLSKGCKVKEELAMLGKINKLGLVPSVVTYTTLVDGL 591

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G    +    +     GC P +  YTI+I  +C+   +  A ++L  M   G SP+ 
Sbjct: 592 IRSGDITGSFRILELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS--LGSRGCWDAVDKIL 350
           VTY  +V      GK D A+  +  ++ RG E N   Y++LL    L  +G  ++ +  +
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLQGFVLSQKGIDNSEESTV 711

Query: 351 DIMNEASHSPTVFTYNI----------------LINGLCKYGLVDRAINSFNQMVSKNCQ 394
             +      P      I                L+  LCK G  D +    N +V    +
Sbjct: 712 SDIALRETDPECINELISVVEQLGGCISGLCIFLVTRLCKEGRTDES----NDLVQNVLE 767

Query: 395 PDIV---TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
             +      + ++ + C +    + ++L+ L+  S   P   ++  +I GL K+G  E+A
Sbjct: 768 RGVFLEKAMDIIMESYCSKKKHTKCMELITLVLKSGFVPSFKSFCLVIQGLKKEGDAERA 827

Query: 452 MVLYGQMM-ENGI 463
             L  +++  NG+
Sbjct: 828 RELVMELLTSNGV 840



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 49/213 (23%), Positives = 103/213 (48%), Gaps = 15/213 (7%)

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG-------MLNEAL 417
           Y+ L+  L K  L   A  ++ +M +      ++ Y T++ ALCK G        +++ L
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMSKIL 222

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGISPDDITHRTLIWG 476
           ++  +L+            +L+ G  +   +  A+ ++  M  E   +P+ +++  LI G
Sbjct: 223 KIGFVLDSH-------IGTSLLLGFCRGLNLRDALKVFDVMSKEVTCAPNSVSYSILIHG 275

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
            C   ++EEA  L  ++G++G +     Y ++I  LC    +D A  + + MI    KP+
Sbjct: 276 LCEVGRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIPRGCKPN 335

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
              ++ ++  +  DG  EEA  + +K+++ ++F
Sbjct: 336 VHTYTVLIDGLCRDGKIEEANGVCRKMVKDRIF 368


>gi|242061542|ref|XP_002452060.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
 gi|241931891|gb|EES05036.1| hypothetical protein SORBIDRAFT_04g017840 [Sorghum bicolor]
          Length = 674

 Score =  204 bits (519), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/482 (26%), Positives = 240/482 (49%), Gaps = 43/482 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C+R +L DA ++++ + + +   D      L+ G  R   +  A +VL+  
Sbjct: 121 TCNILIKKLCARRRLADAERVLEAL-KTSGAADAVSHNTLVAGYCRDGSLWDAERVLEAA 179

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG   + +TY  ++ G C+ G++  A+ L+  M V+   PD  TYNT+L+ +    ++
Sbjct: 180 RASGAA-NVVTYTALIDGYCRSGRLTDALRLIASMPVA---PDTYTYNTVLKGLCFAKQW 235

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A    ++ +R  C P  +T+   I   C+   + RA+E+L+ M   GC PD+V Y++L
Sbjct: 236 EEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVVIYSTL 295

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN   + G+ DDA+ +++ +L R   PN++ YN  L  L   G WD V +++  M     
Sbjct: 296 VNGFSEHGRVDDALKLLSTMLCR---PNTVCYNAALKGLCIAGRWDEVGELIAEMVRKDC 352

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQM---------VSKN----------------- 392
            P   T++ LIN LC+  L + AI    QM         VS N                 
Sbjct: 353 PPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACADDALK 412

Query: 393 ------CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
                 C+PD +++N VL  LC+     +A +L+  +    C    +T+N LID L + G
Sbjct: 413 LLNSMLCKPDTISFNAVLKCLCRAERWYDAAELMAKMLKEDCHTNEMTFNILIDSLCQNG 472

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            ++ A+ ++  M +   +PD +T+ +LI GF      + A DL + +  R +     +Y 
Sbjct: 473 QVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQGLDKVAFDLFRSMPCRADIF---SYN 529

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
             + GLC + + D A +++  M++    P++  F+ ++  +   G+   A ++++++ ++
Sbjct: 530 ATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILINSLCQKGLVNRAIEVYEQMPKY 589

Query: 567 KV 568
            +
Sbjct: 590 GI 591



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 128/461 (27%), Positives = 227/461 (49%), Gaps = 43/461 (9%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N +L+  C   +  +A +L+  M R N  P+       IR   +   +++A 
Sbjct: 215 VAPDTYTYNTVLKGLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAV 274

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L+ M   G +PD + Y+ +V G  + G++  A+ LL  M    C P+ + YN  L+ +
Sbjct: 275 ELLEQMPKYGCMPDVVIYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGL 331

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G++ +      + +RK CPP   T++ LI  +C+      AIEVL+ M   G  PD+
Sbjct: 332 CIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDV 391

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW-DAVDKILD 351
           V+YN++++   +Q   DDA+ ++N++L +   P++I++N +L  L     W DA + +  
Sbjct: 392 VSYNTIISCFSEQACADDALKLLNSMLCK---PDTISFNAVLKCLCRAERWYDAAELMAK 448

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT------------ 399
           ++ E  H+    T+NILI+ LC+ G V  AI  F  M    C PDIVT            
Sbjct: 449 MLKEDCHT-NEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLINGFSEQG 507

Query: 400 --------------------YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
                               YN  L  LC     ++A +L+  +    C P  +T+N LI
Sbjct: 508 LDKVAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTKDCLPNEVTFNILI 567

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           + L +KG + +A+ +Y QM + GI+PD  T+  LI G+     +++A+  L  +    + 
Sbjct: 568 NSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFLSTMPCEPDT 627

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           +   +Y  ++ GLC++++   A +++  M+     P++  F
Sbjct: 628 I---SYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 665



 Score =  171 bits (434), Expect = 8e-40,   Method: Compositional matrix adjust.
 Identities = 105/351 (29%), Positives = 179/351 (50%), Gaps = 9/351 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  L+  C  G+  +  +LI  M R++  P+      LI  L +    E A +VL+ M  
Sbjct: 325 NAALKGLCIAGRWDEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQK 384

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +PD ++YN ++    ++     A+ LL+ M    C+PD I++N +L+ +    ++  
Sbjct: 385 YGYMPDVVSYNTIISCFSEQACADDALKLLNSML---CKPDTISFNAVLKCLCRAERWYD 441

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A       L++ C    +T+ ILI+ +C+   +  AIE+ + M    C+PDIVTY+SL+N
Sbjct: 442 AAELMAKMLKEDCHTNEMTFNILIDSLCQNGQVKDAIEMFELMPKYRCTPDIVTYSSLIN 501

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +QG    A  +  ++  R    +  +YN  L  L     WD   +++  M      P
Sbjct: 502 GFSEQGLDKVAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTKDCLP 558

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+NILIN LC+ GLV+RAI  + QM      PDI TYN ++    ++G L++AL+ L
Sbjct: 559 NEVTFNILINSLCQKGLVNRAIEVYEQMPKYGITPDIFTYNALINGYSEQGCLDDALKFL 618

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             +    C P  I+YN+++ GL +    + A  L  +M+    +P+++T +
Sbjct: 619 STM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 666



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 86/311 (27%), Positives = 163/311 (52%), Gaps = 8/311 (2%)

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
           PP +IT  ILI+++C +  +A A  VL+ +   G + D V++N+LV   C+ G   DA  
Sbjct: 116 PPAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWDAER 174

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           V+    + G   N +TY  L+      G    +   L ++     +P  +TYN ++ GLC
Sbjct: 175 VLEAARASGAA-NVVTYTALIDGYCRSG---RLTDALRLIASMPVAPDTYTYNTVLKGLC 230

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
                + A     +M+  NC P+ VT+ T + A C+ G+L+ A++LL  +    C P ++
Sbjct: 231 FAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMPDVV 290

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            Y+TL++G ++ G ++ A+ L   M+     P+ + +   + G C A + +E  +L+ E+
Sbjct: 291 IYSTLVNGFSEHGRVDDALKLLSTML---CRPNTVCYNAALKGLCIAGRWDEVGELIAEM 347

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            ++     ++ +  +I+ LC+++  + AI+VLE M    Y PD   ++TI+   ++    
Sbjct: 348 VRKDCPPNDATFSTLINSLCQNRLAEYAIEVLEQMQKYGYMPDVVSYNTIISCFSEQACA 407

Query: 554 EEAYKLWQKLI 564
           ++A KL   ++
Sbjct: 408 DDALKLLNSML 418



 Score = 97.1 bits (240), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 60/209 (28%), Positives = 104/209 (49%), Gaps = 5/209 (2%)

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A   P V T NILI  LC    +  A      + +     D V++NT++   C++G L +
Sbjct: 113 APEPPAVITCNILIKKLCARRRLADAERVLEALKTSG-AADAVSHNTLVAGYCRDGSLWD 171

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A ++L     S  +  ++TY  LIDG  + G +  A+ L   M    ++PD  T+ T++ 
Sbjct: 172 AERVLEAARASGAAN-VVTYTALIDGYCRSGRLTDALRLIASM---PVAPDTYTYNTVLK 227

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C A Q EEA +L++E+ +         +   I   C++  +D A+++LE M      P
Sbjct: 228 GLCFAKQWEEAEELMREMIRNNCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCMP 287

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           D  ++ST+V   ++ G  ++A KL   ++
Sbjct: 288 DVVIYSTLVNGFSEHGRVDDALKLLSTML 316


>gi|334184106|ref|NP_178323.3| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|218546751|sp|P0C894.1|PP143_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At2g02150
 gi|330250459|gb|AEC05553.1| tetratricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 761

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 128/449 (28%), Positives = 211/449 (46%), Gaps = 1/449 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N +L  F   GK  D  +    M      P       +I  + +   +E A  + + 
Sbjct: 228 RSCNGLLHRFAKLGKTDDVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEE 287

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G VPDT+TYN M+ G  K G++   +   +EM    CEPDVITYN ++      GK
Sbjct: 288 MKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGK 347

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
               + F+++    G  P +++Y+ L++  CK+  + +AI+   DM   G  P+  TY S
Sbjct: 348 LPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTS 407

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++ +CK G   DA  + N +L  G+E N +TY  L+  L         +++   M+ A 
Sbjct: 408 LIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAG 467

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P + +YN LI+G  K   +DRA+   N++  +  +PD++ Y T +  LC    +  A 
Sbjct: 468 VIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAK 527

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +++ +         + Y TL+D   K G   + + L  +M E  I    +T   LI G 
Sbjct: 528 VVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGL 587

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           C+   V +AVD    I        N+A +  +I GLCK  +V+ A  + E M+     PD
Sbjct: 588 CKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPD 647

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            T +++++      G   EA  L  K+ E
Sbjct: 648 RTAYTSLMDGNFKQGNVLEALALRDKMAE 676



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 119/483 (24%), Positives = 219/483 (45%), Gaps = 36/483 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G +  A  L + M  R  +PD     ++I G  ++ R++      + M
Sbjct: 264 TYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 323

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 PD ITYN ++   CK G++   +    EM  +G +P+V++Y+T++      G  
Sbjct: 324 KDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVVSYSTLVDAFCKEGMM 383

Query: 239 KQAIGFWKDQLRKGCPPY-----------------------------------LITYTIL 263
           +QAI F+ D  R G  P                                    ++TYT L
Sbjct: 384 QQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEMLQVGVEWNVVTYTAL 443

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+ +C    +  A E+   M   G  P++ +YN+L++   K    D A+ ++N L  RG+
Sbjct: 444 IDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 503

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           +P+ + Y T +  L S    +A   +++ M E         Y  L++   K G     ++
Sbjct: 504 KPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAYFKSGNPTEGLH 563

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL-NGSSCSPCLITYNTLIDGL 442
             ++M   + +  +VT+  ++  LCK  ++++A+   + + N          +  +IDGL
Sbjct: 564 LLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQANAAIFTAMIDGL 623

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K   +E A  L+ QM++ G+ PD   + +L+ G  +   V EA+ L  ++ + G K+  
Sbjct: 624 CKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMAEIGMKLDL 683

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            AY  ++ GL    ++  A   LE MI     PD+ +  +++KK  + G  +EA +L   
Sbjct: 684 LAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCIDEAVELQSY 743

Query: 563 LIE 565
           L++
Sbjct: 744 LMK 746



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 112/454 (24%), Positives = 202/454 (44%), Gaps = 38/454 (8%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +P F     L   LI +  +E+A +    M      P T + N ++    K G+      
Sbjct: 189 VPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTDDVKR 248

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
              +M  +G  P V TYN ++  M   G  + A G +++   +G  P  +TY  +I+   
Sbjct: 249 FFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMIDGFG 308

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   +   +   ++M    C PD++TYN+L+N  CK GK    +     +   G++PN +
Sbjct: 309 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLKPNVV 368

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           +Y+TL+ +    G      K    M      P  +TY  LI+  CK G +  A    N+M
Sbjct: 369 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRLGNEM 428

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           +    + ++VTY  ++  LC    + EA +L   ++ +   P L +YN LI G  K   M
Sbjct: 429 LQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNM 488

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA---VDLLKEIGKRGNKMRNS-- 503
           ++A+ L  ++   GI PD + + T IWG C  +++E A   ++ +KE G + N +  +  
Sbjct: 489 DRALELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTL 548

Query: 504 ------------------------------AYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
                                          + ++I GLCK+K V  A+      IS+ +
Sbjct: 549 MDAYFKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFN-RISNDF 607

Query: 534 --KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             + +  +F+ ++  +  D   E A  L++++++
Sbjct: 608 GLQANAAIFTAMIDGLCKDNQVEAATTLFEQMVQ 641



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 83/330 (25%), Positives = 145/330 (43%), Gaps = 35/330 (10%)

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R  C P    +  L   +     +  AI+    M      P   + N L++   K GK D
Sbjct: 185 RNVCVPGFGVFDALFSVLIDLGMLEEAIQCFSKMKRFRVFPKTRSCNGLLHRFAKLGKTD 244

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           D      +++  G  P   TYN ++  +   G  +A   + + M      P   TYN +I
Sbjct: 245 DVKRFFKDMIGAGARPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLVPDTVTYNSMI 304

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +G  K G +D  +  F +M    C+PD++TYN ++   CK G L   L+    + G+   
Sbjct: 305 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPIGLEFYREMKGNGLK 364

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI--------------- 474
           P +++Y+TL+D   K+G M++A+  Y  M   G+ P++ T+ +LI               
Sbjct: 365 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDANCKIGNLSDAFRL 424

Query: 475 ----------W----------GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
                     W          G C A++++EA +L  ++   G     ++Y  +IHG  K
Sbjct: 425 GNEMLQVGVEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVK 484

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +K +D A+++L  +     KPD  ++ T +
Sbjct: 485 AKNMDRALELLNELKGRGIKPDLLLYGTFI 514



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 63/308 (20%), Positives = 142/308 (46%), Gaps = 1/308 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +  T   ++   C   ++ +A +L   M     IP+      LI G ++   +++A 
Sbjct: 433 VEWNVVTYTALIDGLCDAERMKEAEELFGKMDTAGVIPNLASYNALIHGFVKAKNMDRAL 492

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  +   G  PD + Y   + GLC   +I +A  +++EM   G + + + Y T++   
Sbjct: 493 ELLNELKGRGIKPDLLLYGTFIWGLCSLEKIEAAKVVMNEMKECGIKANSLIYTTLMDAY 552

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPD 291
           F +G   + +    +         ++T+ +LI+ +CK   +++A++  + ++ + G   +
Sbjct: 553 FKSGNPTEGLHLLDEMKELDIEVTVVTFCVLIDGLCKNKLVSKAVDYFNRISNDFGLQAN 612

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
              + ++++  CK  + + A  +   ++ +G+ P+   Y +L+     +G       + D
Sbjct: 613 AAIFTAMIDGLCKDNQVEAATTLFEQMVQKGLVPDRTAYTSLMDGNFKQGNVLEALALRD 672

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M E      +  Y  L+ GL     + +A +   +M+ +   PD V   +VL    + G
Sbjct: 673 KMAEIGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELG 732

Query: 412 MLNEALQL 419
            ++EA++L
Sbjct: 733 CIDEAVEL 740


>gi|449499490|ref|XP_004160831.1| PREDICTED: pentatricopeptide repeat-containing protein At1g06710,
           mitochondrial-like [Cucumis sativus]
          Length = 1000

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 220/433 (50%), Gaps = 28/433 (6%)

Query: 121 NKILQNFCSRGKLTD------ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           N ++ + CS G+L        A K  + M     + +    ++  R L    + EKA KV
Sbjct: 417 NILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKV 476

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           +  M+ +G VPDT TY+ ++G LC   ++ +A  L  EM  +G  PDV TY  ++     
Sbjct: 477 IHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSK 536

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G  KQA  +  + +R GC P ++TYT LI    K   ++ A E+ + M  +GC P+++T
Sbjct: 537 AGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVIT 596

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRG------------------MEPNSITYNTLLHS 336
           Y +L++  CK G  + A  +   +  RG                   +PN +TY  L+  
Sbjct: 597 YTALIDGYCKSGNIEKACQIYARM--RGDADIPDVDMYFKIKNNVAEKPNVVTYGALVDG 654

Query: 337 L-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           L  +    DA D +L+ M      P    Y+ LI+G CK   +D A   F++MV +   P
Sbjct: 655 LCKAHKVKDARD-LLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFHKMVERGYNP 713

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           ++ TY++++  L K+  L+  L++L  +  +SC+P ++ Y  +IDGL+K    ++A  L 
Sbjct: 714 NVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVAKTDEAYKLM 773

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M E G  P+ +T+  +I GF +A +V++ ++L +E+G +G       Y ++I+  C +
Sbjct: 774 LMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYTVLINHCCAT 833

Query: 516 KKVDMAIQVLELM 528
             +D A  +LE M
Sbjct: 834 GHLDEAYALLEEM 846



 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 138/527 (26%), Positives = 223/527 (42%), Gaps = 86/527 (16%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  GK   A K+I  M     +PD      +I  L    R+E A  + + M  +G VPD 
Sbjct: 465 CGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDV 524

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            TY +++    K G I+ A   LDEM   GCEP V+TY T++       K   A   ++ 
Sbjct: 525 YTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFEL 584

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEV---------------------------- 279
            + KGC P +ITYT LI+  CK   I +A ++                            
Sbjct: 585 MIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAEKPN 644

Query: 280 -----------------------LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
                                  L+ M ++GC P+ + Y++L++  CK  K D+A  V +
Sbjct: 645 VVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFCKAAKLDEAQEVFH 704

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            ++ RG  PN  TY++L+  L      D V K+L  M E S +P +  Y  +I+GL K  
Sbjct: 705 KMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLENSCAPNIVIYTEMIDGLSKVA 764

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
             D A      M  K C+P++VTY  ++    K G +++ L+L   +    C+P  +TY 
Sbjct: 765 KTDEAYKLMLMMEEKGCKPNVVTYTAMIDGFGKAGKVDKCLELFREMGSKGCAPNFVTYT 824

Query: 437 TLIDGLAKKGCMEKAMVLYGQMME---------------------------------NGI 463
            LI+     G +++A  L  +M +                                 NG 
Sbjct: 825 VLINHCCATGHLDEAYALLEEMKQTYWPKHVSSYCKVIEGYKREFILSLGLLEEVEKNGS 884

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM--RNSAYRLVIHGLCKSKKVDMA 521
           +P  + ++ LI  F +A ++E A++L KE+      M  + + Y  +I+    + K+D A
Sbjct: 885 APTILLYKVLIDNFVKAGRLEVALELHKEVISASMSMTAKKNLYTSLIYSFSYASKIDHA 944

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            ++   MI     PD   F  ++  +      EEA +L   L +  +
Sbjct: 945 FELFYDMIRDGVIPDLGTFVHLLMGLIRVRRWEEALQLSDSLCQMDI 991



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 126/472 (26%), Positives = 218/472 (46%), Gaps = 25/472 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T     Q  C  GK  +A  LI+   + + +P+      +I GL      E+A   L
Sbjct: 275 DEFTLGFFAQALCKVGKWREALSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFL 331

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +  +P+  TY +++ G   + Q+     +L  M   GC P    +N+++     +
Sbjct: 332 NRMRSTSCIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKS 391

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK------QCGIARAIEVLDDMAIEGCS 289
             F  A    K   +  C P  + Y ILI  +C             A +  ++M   G  
Sbjct: 392 DDFSYAYKLLKKMEKCECKPGYVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTV 451

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            + V   S     C  GK++ A  VI+ ++  G  P++ TY+ ++  L +    +    +
Sbjct: 452 LNKVNVVSFARCLCGFGKFEKAYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFL 511

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M      P V+TY ILI+   K G++ +A N  ++MV   C+P +VTY T++ A  K
Sbjct: 512 FKEMKGTGVVPDVYTYTILIDCFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLK 571

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM----------- 458
              ++ A +L  L+    C P +ITY  LIDG  K G +EKA  +Y +M           
Sbjct: 572 AKKVSVANELFELMIAKGCFPNVITYTALIDGYCKSGNIEKACQIYARMRGDADIPDVDM 631

Query: 459 ---MENGIS--PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
              ++N ++  P+ +T+  L+ G C+A +V++A DLL+ +   G +     Y  +I G C
Sbjct: 632 YFKIKNNVAEKPNVVTYGALVDGLCKAHKVKDARDLLETMFVDGCEPNTIVYDALIDGFC 691

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K+ K+D A +V   M+   Y P+   +S+++ ++  D   +   K+  K++E
Sbjct: 692 KAAKLDEAQEVFHKMVERGYNPNVYTYSSLIDRLFKDKRLDLVLKVLSKMLE 743



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 104/398 (26%), Positives = 179/398 (44%), Gaps = 9/398 (2%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L++  +R D+++ A  V + M   G   D  T       LCK G+ R A++L+++     
Sbjct: 247 LVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREALSLIEKEDFV- 305

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P+ I YN ++  + +   F++A+ F        C P + TY IL+     +  + R  
Sbjct: 306 --PNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCGCLNKKQLGRCK 363

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L  M  EGC P    +NSLV+  CK   +  A  ++  +     +P  + YN L+ S+
Sbjct: 364 RILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPGYVVYNILIGSI 423

Query: 338 GSRG------CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            S G       ++  +K  + M  A               LC +G  ++A    ++M+  
Sbjct: 424 CSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEKAYKVIHEMMGN 483

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              PD  TY+ V+G LC    +  A  L   + G+   P + TY  LID  +K G +++A
Sbjct: 484 GFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILIDCFSKAGIIKQA 543

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
                +M+ +G  P  +T+ TLI  + +A +V  A +L + +  +G       Y  +I G
Sbjct: 544 HNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFPNVITYTALIDG 603

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            CKS  ++ A Q+   M      PD  ++  I   VA+
Sbjct: 604 YCKSGNIEKACQIYARMRGDADIPDVDMYFKIKNNVAE 641



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 93/388 (23%), Positives = 180/388 (46%), Gaps = 9/388 (2%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P  +TYN +V    +  ++ +A  +  EMS  G   D  T     + +   GK+++A
Sbjct: 236 GYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQALCKVGKWREA 295

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   +   ++   P  I Y  +I  +C+      A++ L+ M    C P++ TY  L+  
Sbjct: 296 LSLIE---KEDFVPNTILYNKMISGLCEASFFEEAMDFLNRMRSTSCIPNVQTYRILLCG 352

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
              + +      +++ +++ G  P+   +N+L+H+      +    K+L  M +    P 
Sbjct: 353 CLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAYKLLKKMEKCECKPG 412

Query: 362 VFTYNILINGLCKYG------LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              YNILI  +C  G        + A  ++N+M+S     + V   +    LC  G   +
Sbjct: 413 YVVYNILIGSICSGGELPGPVTFELAEKAYNEMLSAGTVLNKVNVVSFARCLCGFGKFEK 472

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +++H + G+   P   TY+ +I  L     +E A  L+ +M   G+ PD  T+  LI 
Sbjct: 473 AYKVIHEMMGNGFVPDTSTYSEVIGFLCNASRVENAFFLFKEMKGTGVVPDVYTYTILID 532

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            F +A  +++A + L E+ + G +     Y  +IH   K+KKV +A ++ ELMI+    P
Sbjct: 533 CFSKAGIIKQAHNWLDEMVRDGCEPTVVTYTTLIHAYLKAKKVSVANELFELMIAKGCFP 592

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +   ++ ++      G  E+A +++ ++
Sbjct: 593 NVITYTALIDGYCKSGNIEKACQIYARM 620



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 56/246 (22%), Positives = 104/246 (42%), Gaps = 50/246 (20%)

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI-VTYNTVLGALCKEGMLNEA 416
           H+P V+   I +  + + G  DR    F + +  + +  +    N ++   C+ G+ N A
Sbjct: 169 HTPAVY---IALLDVFERGSYDRVPEEFLREIRGDDKEVLGKLLNVLIRKCCRNGLWNVA 225

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS------------ 464
           L+ L  L      P  +TYN L+    +   ++ A +++ +M E G+S            
Sbjct: 226 LEELGRLKDFGYKPTRMTYNALVQVFLRADKLDTAQLVHREMSELGLSMDEFTLGFFAQA 285

Query: 465 --------------------PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
                               P+ I +  +I G C A   EEA+D L       N+MR+++
Sbjct: 286 LCKVGKWREALSLIEKEDFVPNTILYNKMISGLCEASFFEEAMDFL-------NRMRSTS 338

Query: 505 -------YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  YR+++ G    K++    ++L +MI+    P  T+F+++V           AY
Sbjct: 339 CIPNVQTYRILLCGCLNKKQLGRCKRILSMMIAEGCYPSYTIFNSLVHAYCKSDDFSYAY 398

Query: 558 KLWQKL 563
           KL +K+
Sbjct: 399 KLLKKM 404


>gi|12320851|gb|AAG50561.1|AC073506_3 hypothetical protein [Arabidopsis thaliana]
          Length = 802

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 127/480 (26%), Positives = 240/480 (50%), Gaps = 41/480 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           ++++ ++   G+L DA K++ +M R    P+   C   I   +R +R+EKA + L+ M +
Sbjct: 246 SRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQV 305

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC---------------------- 218
            G VP+ +TYN M+ G C   ++  AI LL++M   GC                      
Sbjct: 306 VGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVE 365

Query: 219 --------------EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
                          PD +TYNT++  +  +    +A+ F KD   KG     + Y+ ++
Sbjct: 366 VRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIV 425

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             +CK+  ++ A +++++M    C PD+VTY ++VN  C+ G+ D A  ++  + + G +
Sbjct: 426 HALCKEGRMSEAKDLINEM---DCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHK 482

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN+++Y  LL+ +   G      +++++  E   SP   TY+++++GL + G +  A + 
Sbjct: 483 PNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDV 542

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +MV K   P  V  N +L +LC++G  +EA + +       C+  ++ + T+I G  +
Sbjct: 543 VREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQ 602

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              ++ A+ +   M       D  T+ TL+    +  ++ EA +L+K++  +G       
Sbjct: 603 NDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVT 662

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           YR VIH  C+  KVD  + +LE MIS   +   T+++ +++K+   G  EEA  L  K++
Sbjct: 663 YRTVIHRYCQMGKVDDLVAILEKMISR--QKCRTIYNQVIEKLCVLGKLEEADTLLGKVL 720



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 209/431 (48%), Gaps = 41/431 (9%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           + +VL +M   G       ++ ++    + GQ+R A+ +L  M  +G EP+++  NT + 
Sbjct: 226 SRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVLTLMQRAGVEPNLLICNTTID 285

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                 + ++A+ F +     G  P ++TY  +I   C    +  AIE+L+DM  +GC P
Sbjct: 286 VFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDLHRVEEAIELLEDMHSKGCLP 345

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-----GMEPNSITYNTLLHSL-----GSR 340
           D V+Y +++ + CK+ +    ++ + +L+ +     G+ P+ +TYNTL+H L        
Sbjct: 346 DKVSYYTIMGYLCKEKR----IVEVRDLMKKMAKEHGLVPDQVTYNTLIHMLTKHDHADE 401

Query: 341 GCW---DA------VDKI------------------LDIMNEASHSPTVFTYNILINGLC 373
             W   DA      +DK+                   D++NE    P V TY  ++NG C
Sbjct: 402 ALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKDLINEMDCPPDVVTYTAVVNGFC 461

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           + G VD+A      M +   +P+ V+Y  +L  +C+ G   EA +++++      SP  I
Sbjct: 462 RLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMMNMSEEHWWSPNSI 521

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TY+ ++ GL ++G + +A  +  +M+  G  P  +    L+   CR  +  EA   ++E 
Sbjct: 522 TYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRDGRTHEARKFMEEC 581

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
             +G  +    +  VIHG C++ ++D A+ VL+ M       D   ++T+V  +   G  
Sbjct: 582 LNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTYTTLVDTLGKKGRI 641

Query: 554 EEAYKLWQKLI 564
            EA +L +K++
Sbjct: 642 AEATELMKKML 652



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 90/378 (23%), Positives = 179/378 (47%), Gaps = 4/378 (1%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D + Y  M+  L K    + +  +L  M   G       ++ ++ +    G+ + A+   
Sbjct: 206 DPMVYYSMLEVLSKTKLCQGSRRVLVLMKRRGIYRTPEAFSRVMVSYSRAGQLRDALKVL 265

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
               R G  P L+     I+   +   + +A+  L+ M + G  P++VTYN ++   C  
Sbjct: 266 TLMQRAGVEPNLLICNTTIDVFVRANRLEKALRFLERMQVVGIVPNVVTYNCMIRGYCDL 325

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFT 364
            + ++A+ ++ ++ S+G  P+ ++Y T++  L   +   +  D +  +  E    P   T
Sbjct: 326 HRVEEAIELLEDMHSKGCLPDKVSYYTIMGYLCKEKRIVEVRDLMKKMAKEHGLVPDQVT 385

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN LI+ L K+   D A+        K  + D + Y+ ++ ALCKEG ++EA     L+N
Sbjct: 386 YNTLIHMLTKHDHADEALWFLKDAQEKGFRIDKLGYSAIVHALCKEGRMSEAKD---LIN 442

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
              C P ++TY  +++G  + G ++KA  L   M  +G  P+ +++  L+ G CR  +  
Sbjct: 443 EMDCPPDVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSL 502

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA +++    +      +  Y +++HGL +  K+  A  V+  M+   + P     + ++
Sbjct: 503 EAREMMNMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLL 562

Query: 545 KKVADDGMTEEAYKLWQK 562
           + +  DG T EA K  ++
Sbjct: 563 QSLCRDGRTHEARKFMEE 580



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 89/354 (25%), Positives = 175/354 (49%), Gaps = 3/354 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  FC  G++  A KL+ +M      P+      L+ G+ R  +  +A +++
Sbjct: 449 DVVTYTAVVNGFCRLGEVDKAKKLLQVMHTHGHKPNTVSYTALLNGMCRTGKSLEAREMM 508

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +       P++ITY++++ GL + G++  A  ++ EM + G  P  +  N +L+++  +
Sbjct: 509 NMSEEHWWSPNSITYSVIMHGLRREGKLSEACDVVREMVLKGFFPGPVEINLLLQSLCRD 568

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A  F ++ L KGC   ++ +T +I   C+   +  A+ VLDDM +     D+ TY
Sbjct: 569 GRTHEARKFMEECLNKGCAINVVNFTTVIHGFCQNDELDAALSVLDDMYLINKHADVFTY 628

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +LV+   K+G+  +A  ++  +L +G++P  +TY T++H     G  D +  IL+ M  
Sbjct: 629 TTLVDTLGKKGRIAEATELMKKMLHKGIDPTPVTYRTVIHRYCQMGKVDDLVAILEKMIS 688

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                T+  YN +I  LC  G ++ A     +++    + D  T   ++    K+G+   
Sbjct: 689 RQKCRTI--YNQVIEKLCVLGKLEEADTLLGKVLRTASRSDAKTCYALMEGYLKKGVPLS 746

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-ISPDDI 468
           A ++   +   +  P +     L   L  KG +++A  L  +++E G ISP  +
Sbjct: 747 AYKVACRMFNRNLIPDVKMCEKLSKRLVLKGKVDEADKLMLRLVERGHISPQSL 800


>gi|302756535|ref|XP_002961691.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
 gi|300170350|gb|EFJ36951.1| hypothetical protein SELMODRAFT_403786 [Selaginella moellendorffii]
          Length = 545

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 125/413 (30%), Positives = 216/413 (52%), Gaps = 5/413 (1%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C NL+   ++  R+E A    Q  + +   PD ++YN ++ G  K G ++ A+AL  EM 
Sbjct: 105 CNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGEMK 164

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
            SG    + ++N +LR +   GK   A   +KD +     P LI+YTI+I+ +CK   + 
Sbjct: 165 DSGIAV-LRSHNIVLRGLCSGGKISMAWEVFKD-MSGIFSPNLISYTIMIDGLCKSRKVD 222

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
           +AI +   M  +   PD+VTY +L++   KQ +  +A  +     ++G  P  +TYNT++
Sbjct: 223 KAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMI 282

Query: 335 HSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
             L   G   +A+    D++ E    P +FTY+ LINGL      ++A   + +M+   C
Sbjct: 283 DGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGC 342

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLN-GSSCSPCLITYNTLIDGLAKKGCMEKAM 452
            PD+VTYNT+L  LCK G  ++A+++   +  G+ C P +ITY  LID   K   +  A+
Sbjct: 343 SPDVVTYNTLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAV 402

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  +M    + PD +T  T+I   C+  +++EA +L + IGK   K  +  +  ++ G 
Sbjct: 403 KLAKEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELFESIGKTC-KPDSVLFNTMLAGY 461

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           CK  ++D A ++ + M+ S   P    ++ +V      G   +A  ++ ++IE
Sbjct: 462 CKITRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIE 514



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 118/388 (30%), Positives = 199/388 (51%), Gaps = 9/388 (2%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E DE + N ++  F   G +  A  L   M + + I        ++RGL    +I  A +
Sbjct: 134 EPDEVSYNTLMNGFFKAGDVKKALALFGEM-KDSGIAVLRSHNIVLRGLCSGGKISMAWE 192

Query: 174 VLQIMVMSGGV--PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           V + M    G+  P+ I+Y +M+ GLCK  ++  AI L  +M      PDV+TY  ++  
Sbjct: 193 VFKDM---SGIFSPNLISYTIMIDGLCKSRKVDKAITLFKQMVDKAIYPDVVTYGALIDG 249

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSP 290
           +    + K+A   +++   KGC P ++TY  +I+ +CK   I  A+ + DDM  E    P
Sbjct: 250 LGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGRIENALTLYDDMVREPHLKP 309

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+ TY++L+N      + + A  +   +L  G  P+ +TYNTLL  L   GC D   +I 
Sbjct: 310 DMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYNTLLDGLCKSGCEDKAMEIF 369

Query: 351 DIMNEASH-SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
             M   +   P V TY +LI+  CK   +  A+    +M  ++  PD VT+ TV+  LCK
Sbjct: 370 RKMGVGNVCDPNVITYTVLIDRFCKVDRLGDAVKLAKEMEGRSLLPDAVTFTTVIQKLCK 429

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           E  ++EA +L   + G +C P  + +NT++ G  K   ++ A  L+ +M+++G +P   T
Sbjct: 430 ESRIDEAHELFESI-GKTCKPDSVLFNTMLAGYCKITRIDDAKKLHDRMLDSGCAPTLAT 488

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +  L+ GFCR  +  +A+ +  E+ + G
Sbjct: 489 YTALVTGFCRTGRYSDALIMYHEMIEMG 516



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 187/356 (52%), Gaps = 14/356 (3%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +++N +L+  CS GK++ A ++   M+     P+      +I GL +  +++KA  + + 
Sbjct: 172 RSHNIVLRGLCSGGKISMAWEVFKDMSGIFS-PNLISYTIMIDGLCKSRKVDKAITLFKQ 230

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV     PD +TY  ++ GL K+ +++ A  L +E    GC P V+TYNT++  +   G+
Sbjct: 231 MVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMIDGLCKCGR 290

Query: 238 FKQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
            + A+  + D +R+    P + TY+ LI  +       +A E+ ++M   GCSPD+VTYN
Sbjct: 291 IENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLDTGCSPDVVTYN 350

Query: 297 SLVNFSCKQGKYDDAVLVINNL-LSRGMEPNSITYNTLLHSLGSRGC-----WDAVDKIL 350
           +L++  CK G  D A+ +   + +    +PN ITY  L+     R C      DAV K+ 
Sbjct: 351 TLLDGLCKSGCEDKAMEIFRKMGVGNVCDPNVITYTVLI----DRFCKVDRLGDAV-KLA 405

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M   S  P   T+  +I  LCK   +D A   F + + K C+PD V +NT+L   CK 
Sbjct: 406 KEMEGRSLLPDAVTFTTVIQKLCKESRIDEAHELF-ESIGKTCKPDSVLFNTMLAGYCKI 464

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
             +++A +L   +  S C+P L TY  L+ G  + G    A+++Y +M+E G  P+
Sbjct: 465 TRIDDAKKLHDRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPE 520



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 65/237 (27%), Positives = 112/237 (47%), Gaps = 34/237 (14%)

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FT N L++   K   V+ A   F   +    +PD V+YNT++    K G + +AL L   
Sbjct: 103 FTCNNLLSVYVKARRVEDAHLFFQSHMKNVFEPDEVSYNTLMNGFFKAGDVKKALALFGE 162

Query: 423 LNGSSC---------------------------------SPCLITYNTLIDGLAKKGCME 449
           +  S                                   SP LI+Y  +IDGL K   ++
Sbjct: 163 MKDSGIAVLRSHNIVLRGLCSGGKISMAWEVFKDMSGIFSPNLISYTIMIDGLCKSRKVD 222

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KA+ L+ QM++  I PD +T+  LI G  +  +V+EA DL +E   +G       Y  +I
Sbjct: 223 KAITLFKQMVDKAIYPDVVTYGALIDGLGKQRRVKEAYDLFEEARAKGCHPTVVTYNTMI 282

Query: 510 HGLCKSKKVDMAIQVLELMISSRY-KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            GLCK  +++ A+ + + M+   + KPD   +S ++  +      E+AY+L++++++
Sbjct: 283 DGLCKCGRIENALTLYDDMVREPHLKPDMFTYSALINGLNLSNRGEKAYELYEEMLD 339



 Score = 53.5 bits (127), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 32/120 (26%), Positives = 56/120 (46%), Gaps = 1/120 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++Q  C   ++ +A +L + + +  + PD      ++ G  +I RI+ A K+ 
Sbjct: 416 DAVTFTTVIQKLCKESRIDEAHELFESIGKTCK-PDSVLFNTMLAGYCKITRIDDAKKLH 474

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ SG  P   TY  +V G C+ G+   A+ +  EM   G  P+      + RT  D+
Sbjct: 475 DRMLDSGCAPTLATYTALVTGFCRTGRYSDALIMYHEMIEMGFPPERHLAELVDRTRTDH 534


>gi|225428276|ref|XP_002279589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g17140
           [Vitis vinifera]
 gi|297744485|emb|CBI37747.3| unnamed protein product [Vitis vinifera]
          Length = 878

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 134/458 (29%), Positives = 232/458 (50%), Gaps = 22/458 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+ FC  G L +A  L++ M R   + +       + GL+R  ++ +A   L+ M
Sbjct: 297 TFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLALKEM 356

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+  ++N ++ GLCK G I  A  ++  M  SG  PD +TY+T+L      GK 
Sbjct: 357 VDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCSTGKV 416

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A     + +R+GC P   T  IL+  + K+  I  A ++L  M       D VT N +
Sbjct: 417 LKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIV 476

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK D+AV ++  +   G             +LG+ G     +  + +++ +S+
Sbjct: 477 IDGLCKSGKLDEAVEIVEGMWIHGSA-----------ALGNLG-----NSFIGLVDSSSN 520

Query: 359 S----PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P + TY+I+INGLCK G +D A   F +MV K+  PD + Y+T + + CK G ++
Sbjct: 521 GKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHSFCKHGKIS 580

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A ++L  +    C+  L TYN+LI GL  K  + +   L   M E GI+P+  T+  +I
Sbjct: 581 SAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPNICTYNNMI 640

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              C   ++++A  LL E+ ++G     S++RL+I   CK+    +  +V E+ +S    
Sbjct: 641 SCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFEIALSI-CG 699

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
             + ++S +  ++   G   EA +L+   ++ + F+ G
Sbjct: 700 HKEALYSLMFNELLIGGEVSEAKELFDAALD-RCFDLG 736



 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 138/481 (28%), Positives = 238/481 (49%), Gaps = 31/481 (6%)

Query: 110 GPF-VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           G F V+ ++   N ++ +FC  G+  +A +L++ M      PD     + I  L    +I
Sbjct: 213 GSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKI 272

Query: 169 EKASKVLQIMVMSGGV----PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
            +AS++ + M +   +    P+  T+N+M+ G CK G +  A  L++ M  +G   ++ +
Sbjct: 273 LEASRIFRDMQIDEELGLPRPNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELES 332

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN  L  +  NGK  +A    K+ + KG  P + ++  +++ +CK   I+ A  ++  M 
Sbjct: 333 YNIWLLGLVRNGKLLEAQLALKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMI 392

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             G  PD VTY++L++  C  GK   A  +++ ++ RG  PN+ T N LLHSL   G   
Sbjct: 393 SSGIGPDTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIF 452

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI------------------NSFN 386
             +K+L  MNE S+     T NI+I+GLCK G +D A+                  NSF 
Sbjct: 453 EAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNLGNSFI 512

Query: 387 QMV-----SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
            +V      K C PD++TY+ ++  LCK G L+EA +    + G S  P  I Y+T I  
Sbjct: 513 GLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVGKSLHPDSIIYDTFIHS 572

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K G +  A  +   M + G +    T+ +LI G    +Q+ E   LL ++ ++G    
Sbjct: 573 FCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFEIYGLLDDMKEKGITPN 632

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK---KVADDGMTEEAYK 558
              Y  +I  LC+  ++  A  +L+ M+     P+ + F  ++K   K +D G+ +E ++
Sbjct: 633 ICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIKAFCKASDFGVVKEVFE 692

Query: 559 L 559
           +
Sbjct: 693 I 693



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 106/383 (27%), Positives = 192/383 (50%), Gaps = 39/383 (10%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P    YNM++    +  ++ S   L  +M V+G  P+  T N ++  + D+G+F+ A   
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           +     KGC P   ++ IL+   C+     RA+E+LD M   G  P+ V YN+L++  C+
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH----SP 360
           +G+ ++A  ++  +   G+ P+ +T+N+ + +L S G      +I   M          P
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPRP 293

Query: 361 TVFTYNILINGLCKYGLVDRA---------------INSFN------------------- 386
            + T+N+++ G CK G+++ A               + S+N                   
Sbjct: 294 NITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLAL 353

Query: 387 -QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            +MV K  +P+I ++NTV+  LCK G++++A  ++ L+  S   P  +TY+TL+ G    
Sbjct: 354 KEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCST 413

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G + KA  +  +MM  G SP+  T   L+    +  ++ EA  LL+++ +R   + N   
Sbjct: 414 GKVLKANNILHEMMRRGCSPNTYTCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTC 473

Query: 506 RLVIHGLCKSKKVDMAIQVLELM 528
            +VI GLCKS K+D A++++E M
Sbjct: 474 NIVIDGLCKSGKLDEAVEIVEGM 496



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 209/428 (48%), Gaps = 23/428 (5%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           + S  GP    D  T + +L   CS GK+  A+ ++  M RR   P+ + C  L+  L +
Sbjct: 392 ISSGIGP----DTVTYSTLLHGCCSTGKVLKANNILHEMMRRGCSPNTYTCNILLHSLWK 447

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             RI +A K+LQ M       D +T N+++ GLCK G++  A+ +++ M + G       
Sbjct: 448 EGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGMWIHGSAALGNL 507

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
            N+ +  +  +   K+            C P LITY+I+I  +CK   +  A +   +M 
Sbjct: 508 GNSFIGLVDSSSNGKK------------CLPDLITYSIIINGLCKAGRLDEARKKFIEMV 555

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +   PD + Y++ ++  CK GK   A  V+ ++  RG   +  TYN+L+  LGS+    
Sbjct: 556 GKSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIF 615

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
            +  +LD M E   +P + TYN +I+ LC+ G +  A +  ++M+ K   P+I ++  ++
Sbjct: 616 EIYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLI 675

Query: 405 GALCKE---GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            A CK    G++ E  ++   + G   +   + +N L+ G    G + +A  L+   ++ 
Sbjct: 676 KAFCKASDFGVVKEVFEIALSICGHKEALYSLMFNELLIG----GEVSEAKELFDAALDR 731

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
                +  +  LI   C+ + +E A D+L ++  +G +   +++  VI GL K  K   A
Sbjct: 732 CFDLGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPASFMPVIDGLGKRGKKHDA 791

Query: 522 IQVLELMI 529
            ++ E M+
Sbjct: 792 DELAERMM 799



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 99/368 (26%), Positives = 176/368 (47%), Gaps = 30/368 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L +    G++ +A KL+  M  R+   D   C  +I GL +  ++++A ++++ M
Sbjct: 437 TCNILLHSLWKEGRIFEAEKLLQKMNERSYDLDNVTCNIVIDGLCKSGKLDEAVEIVEGM 496

Query: 179 VMSGG-----------------------VPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
            + G                        +PD ITY++++ GLCK G++  A     EM  
Sbjct: 497 WIHGSAALGNLGNSFIGLVDSSSNGKKCLPDLITYSIIINGLCKAGRLDEARKKFIEMVG 556

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
               PD I Y+T + +   +GK   A    KD  ++GC   L TY  LI  +  +  I  
Sbjct: 557 KSLHPDSIIYDTFIHSFCKHGKISSAFRVLKDMEKRGCNKSLQTYNSLILGLGSKNQIFE 616

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
              +LDDM  +G +P+I TYN++++  C+ G+  DA  +++ +L +G+ PN  ++  L+ 
Sbjct: 617 IYGLLDDMKEKGITPNICTYNNMISCLCEGGRIKDATSLLDEMLQKGISPNISSFRLLIK 676

Query: 336 SLGSRGCWDAVDKILDI-MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           +      +  V ++ +I ++   H   +  Y+++ N L   G V  A   F+  + +   
Sbjct: 677 AFCKASDFGVVKEVFEIALSICGHKEAL--YSLMFNELLIGGEVSEAKELFDAALDRCFD 734

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
                YN ++  LCK+ ML  A  +LH +   G    P   ++  +IDGL K+G    A 
Sbjct: 735 LGNFQYNDLIEKLCKDEMLENASDILHKMIDKGYRFDPA--SFMPVIDGLGKRGKKHDAD 792

Query: 453 VLYGQMME 460
            L  +MM+
Sbjct: 793 ELAERMMD 800



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 148/315 (46%), Gaps = 4/315 (1%)

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
           PP +  Y +++E   ++  +     +  DM + G SP+  T N L+   C  G+++DA  
Sbjct: 113 PPPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDARE 172

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           V + +  +G  PN  ++  L+      G      ++LD M      P    YN LI+  C
Sbjct: 173 VFDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFC 232

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS----CS 429
           + G  + A     +M      PD+VT+N+ + ALC  G + EA ++   +          
Sbjct: 233 REGRNEEAERLVERMREDGLFPDVVTFNSRISALCSAGKILEASRIFRDMQIDEELGLPR 292

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P + T+N +++G  K+G +E+A  L   M  NG   +  ++   + G  R  ++ EA   
Sbjct: 293 PNITTFNLMLEGFCKEGMLEEAKTLVESMKRNGNLMELESYNIWLLGLVRNGKLLEAQLA 352

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           LKE+  +G +    ++  V+ GLCK+  +  A  ++ LMISS   PD   +ST++     
Sbjct: 353 LKEMVDKGIEPNIYSFNTVMDGLCKNGLISDARMIMGLMISSGIGPDTVTYSTLLHGCCS 412

Query: 550 DGMTEEAYKLWQKLI 564
            G   +A  +  +++
Sbjct: 413 TGKVLKANNILHEMM 427



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 56/211 (26%), Positives = 94/211 (44%), Gaps = 6/211 (2%)

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK--NCQPDIVTYNTVLGALCKEGM 412
           E SH   +     LI  L K GL D A + F    S+     P +  YN VL +  +E  
Sbjct: 76  EVSHVSLI----ALIRILAKSGLSDLAFSQFQSFRSQVPANPPPVYLYNMVLESSLREDK 131

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++    L   +  +  SP   T N LI GL   G  E A  ++ +M   G  P++ +   
Sbjct: 132 VDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREVFDKMGVKGCRPNEFSFGI 191

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G+CRA     A++LL  +G  G +     Y  +I   C+  + + A +++E M    
Sbjct: 192 LVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCREGRNEEAERLVERMREDG 251

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             PD   F++ +  +   G   EA ++++ +
Sbjct: 252 LFPDVVTFNSRISALCSAGKILEASRIFRDM 282



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 34/146 (23%), Positives = 78/146 (53%)

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P +  YN +++   ++  ++    LY  M+  G+SP+  T   LI G C + + E+A ++
Sbjct: 114 PPVYLYNMVLESSLREDKVDSFSWLYKDMVVAGVSPETYTLNLLIAGLCDSGRFEDAREV 173

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             ++G +G +    ++ +++ G C++     A+++L+ M S   +P+  +++T++     
Sbjct: 174 FDKMGVKGCRPNEFSFGILVRGYCRAGLSMRALELLDGMGSFGVQPNKVIYNTLISSFCR 233

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +G  EEA +L +++ E  +F    T 
Sbjct: 234 EGRNEEAERLVERMREDGLFPDVVTF 259


>gi|15227316|ref|NP_179280.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75217061|sp|Q9ZVX5.1|PP156_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g16880
 gi|3757517|gb|AAC64219.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|18175643|gb|AAL59902.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|20465657|gb|AAM20297.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251452|gb|AEC06546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 743

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 124/454 (27%), Positives = 230/454 (50%), Gaps = 6/454 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N IL+    +G+L+D  +L+  M +   +P+     NL+ G  ++  +++A 
Sbjct: 236 VNPDNVTYNTILKAMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAF 295

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +++++M  +  +PD  TYN+++ GLC  G +R  + L+D M     +PDV+TYNT++   
Sbjct: 296 QIVELMKQTNVLPDLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGC 355

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC---GIARAIEVLDDMAIEGCS 289
           F+ G   +A    +     G     +T+ I ++ +CK+     + R ++ L DM   G S
Sbjct: 356 FELGLSLEARKLMEQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDM--HGFS 413

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PDIVTY++L+    K G    A+ ++  +  +G++ N+IT NT+L +L      D    +
Sbjct: 414 PDIVTYHTLIKAYLKVGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNL 473

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L+  ++        TY  LI G  +   V++A+  +++M      P + T+N+++G LC 
Sbjct: 474 LNSAHKRGFIVDEVTYGTLIMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCH 533

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G    A++    L  S   P   T+N++I G  K+G +EKA   Y + +++   PD+ T
Sbjct: 534 HGKTELAMEKFDELAESGLLPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYT 593

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              L+ G C+    E+A++    + +   ++    Y  +I   CK KK+  A  +L  M 
Sbjct: 594 CNILLNGLCKEGMTEKALNFFNTLIEE-REVDTVTYNTMISAFCKDKKLKEAYDLLSEME 652

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
               +PD   +++ +  + +DG   E  +L +K 
Sbjct: 653 EKGLEPDRFTYNSFISLLMEDGKLSETDELLKKF 686



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/447 (28%), Positives = 220/447 (49%), Gaps = 5/447 (1%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR---IEKASKVLQIMVM 180
           L  +   GK   A ++   M R    P+   C  L+ GL+R      I  A +V   MV 
Sbjct: 138 LSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSAREVFDDMVK 197

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFK 239
            G   +  T+N++V G C  G++  A+ +L+ M S     PD +TYNTIL+ M   G+  
Sbjct: 198 IGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILKAMSKKGRLS 257

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
                  D  + G  P  +TY  L+   CK   +  A ++++ M      PD+ TYN L+
Sbjct: 258 DLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLPDLCTYNILI 317

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  C  G   + + +++ + S  ++P+ +TYNTL+      G      K+++ M      
Sbjct: 318 NGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLMEQMENDGVK 377

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEALQ 418
               T+NI +  LCK    +       ++V  +   PDIVTY+T++ A  K G L+ AL+
Sbjct: 378 ANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLKVGDLSGALE 437

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  +         IT NT++D L K+  +++A  L     + G   D++T+ TLI GF 
Sbjct: 438 MMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTLIMGFF 497

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R ++VE+A+++  E+ K       S +  +I GLC   K ++A++  + +  S   PDD+
Sbjct: 498 REEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGLLPDDS 557

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            F++I+     +G  E+A++ + + I+
Sbjct: 558 TFNSIILGYCKEGRVEKAFEFYNESIK 584



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/389 (27%), Positives = 183/389 (47%), Gaps = 40/389 (10%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT-YTILIEQV--CKQCGIARA 276
           P    ++  L      GK   A+  ++  +R    P L+T  T+LI  V       I+ A
Sbjct: 129 PSKALFDIALSAYLHEGKPHVALQIFQKMIRLKLKPNLLTCNTLLIGLVRYPSSFSISSA 188

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLH 335
            EV DDM   G S ++ T+N LVN  C +GK +DA+ ++  ++S   + P+++TYNT+L 
Sbjct: 189 REVFDDMVKIGVSLNVQTFNVLVNGYCLEGKLEDALGMLERMVSEFKVNPDNVTYNTILK 248

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           ++  +G    + ++L  M +    P   TYN L+ G CK G +  A      M   N  P
Sbjct: 249 AMSKKGRLSDLKELLLDMKKNGLVPNRVTYNNLVYGYCKLGSLKEAFQIVELMKQTNVLP 308

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D+ TYN ++  LC  G + E L+L+  +      P ++TYNTLIDG  + G   +A  L 
Sbjct: 309 DLCTYNILINGLCNAGSMREGLELMDAMKSLKLQPDVVTYNTLIDGCFELGLSLEARKLM 368

Query: 456 GQMMENGI------------------------------------SPDDITHRTLIWGFCR 479
            QM  +G+                                    SPD +T+ TLI  + +
Sbjct: 369 EQMENDGVKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYHTLIKAYLK 428

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              +  A+++++E+G++G KM       ++  LCK +K+D A  +L       +  D+  
Sbjct: 429 VGDLSGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVT 488

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + T++     +   E+A ++W ++ + K+
Sbjct: 489 YGTLIMGFFREEKVEKALEMWDEMKKVKI 517



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 85/317 (26%), Positives = 152/317 (47%), Gaps = 8/317 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASK----LIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           V+ ++ T+N  L+  C   K    ++    L+D+      I  +H    LI+  +++  +
Sbjct: 376 VKANQVTHNISLKWLCKEEKREAVTRKVKELVDMHGFSPDIVTYH---TLIKAYLKVGDL 432

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
             A ++++ M   G   +TIT N ++  LCK  ++  A  LL+     G   D +TY T+
Sbjct: 433 SGALEMMREMGQKGIKMNTITLNTILDALCKERKLDEAHNLLNSAHKRGFIVDEVTYGTL 492

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +   F   K ++A+  W +  +    P + T+  LI  +C       A+E  D++A  G 
Sbjct: 493 IMGFFREEKVEKALEMWDEMKKVKITPTVSTFNSLIGGLCHHGKTELAMEKFDELAESGL 552

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD  T+NS++   CK+G+ + A    N  +    +P++ T N LL+ L   G  +    
Sbjct: 553 LPDDSTFNSIILGYCKEGRVEKAFEFYNESIKHSFKPDNYTCNILLNGLCKEGMTEKALN 612

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
             + + E     TV TYN +I+  CK   +  A +  ++M  K  +PD  TYN+ +  L 
Sbjct: 613 FFNTLIEEREVDTV-TYNTMISAFCKDKKLKEAYDLLSEMEEKGLEPDRFTYNSFISLLM 671

Query: 409 KEGMLNEALQLLHLLNG 425
           ++G L+E  +LL   +G
Sbjct: 672 EDGKLSETDELLKKFSG 688


>gi|224160015|ref|XP_002338159.1| predicted protein [Populus trichocarpa]
 gi|222871069|gb|EEF08200.1| predicted protein [Populus trichocarpa]
          Length = 368

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/320 (34%), Positives = 175/320 (54%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV  G  PD  TY  ++ GLCK G+  +A  L  +M  +GC+PDV+TY+TI+ ++  + +
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+  +     KG  P + TY  LI+ +C       A  +L++M      P+IVT++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK+G   +A  V+  +   G+EPN +TY++L++    +       K+ D+M    
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P VF+YNILING CK   +  A   FN+M+ +   PDIV+YNT++  LC+ G L EA 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            L   +  +   P L TY+ L+DG  K+G + KA  L+  M    + P+ + +  LI   
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 478 CRADQVEEAVDLLKEIGKRG 497
           C++  ++EA  L  E+  +G
Sbjct: 301 CKSRNLKEARKLFSELFVQG 320



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 99/324 (30%), Positives = 170/324 (52%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           M   G +PDV TY TI+  +   G+   A G +K     GC P ++TY+ +I+ +CK   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           +  A+++   M  +G SP+I TYNSL+   C   ++ +A  ++N ++S  + PN +T++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L++     G       +L  M E    P V TY+ L+NG      V  A   F+ M++K 
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C+PD+ +YN ++   CK   + EA QL + +     +P +++YNTLIDGL + G + +A 
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L+  M+ NG  PD  T+  L+ GFC+   + +A  L + +     K     Y ++I  +
Sbjct: 241 DLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAM 300

Query: 513 CKSKKVDMAIQVLELMISSRYKPD 536
           CKS+ +  A ++   +     +P+
Sbjct: 301 CKSRNLKEARKLFSELFVQGLQPN 324



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 93/329 (28%), Positives = 171/329 (51%), Gaps = 9/329 (2%)

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           +G  P + TYT +I  +CK      A  +   M   GC PD+VTY+++++  CK  + ++
Sbjct: 4   RGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNE 63

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ + + + ++G+ PN  TYN+L+  L +   W     +L+ M   +  P + T+++LIN
Sbjct: 64  ALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLIN 123

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
             CK G V  A      M     +P++VTY++++     +  + EA +L  ++    C P
Sbjct: 124 IFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKP 183

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            + +YN LI+G  K   + +A  L+ +M+  G++PD +++ TLI G C+  ++ EA DL 
Sbjct: 184 DVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLF 243

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           K +   GN      Y +++ G CK   +  A ++   M S+  KP+  +++ ++  +   
Sbjct: 244 KNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKS 303

Query: 551 GMTEEAYKLWQKLI---------EWKVFE 570
              +EA KL+ +L           WK+FE
Sbjct: 304 RNLKEARKLFSELFVQGLQPNMKHWKLFE 332



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 91/315 (28%), Positives = 150/315 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+   C  G+   A+ L   M      PD      +I  L +  R+ +A  + 
Sbjct: 9   DVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRRVNEALDIF 68

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+  TYN ++ GLC   + R A A+L+EM      P+++T++ ++      
Sbjct: 69  SYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSLLINIFCKE 128

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A G  K     G  P ++TY+ L+     Q  +  A ++ D M  +GC PD+ +Y
Sbjct: 129 GNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSY 188

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK  +  +A  + N ++ +G+ P+ ++YNTL+  L   G       +   M  
Sbjct: 189 NILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLT 248

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
             + P + TY+IL++G CK G + +A   F  M S   +P++V YN ++ A+CK   L E
Sbjct: 249 NGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKE 308

Query: 416 ALQLLHLLNGSSCSP 430
           A +L   L      P
Sbjct: 309 ARKLFSELFVQGLQP 323



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 77/282 (27%), Positives = 145/282 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + I+ + C   ++ +A  +   M  +   P+     +LI+GL    R  +AS +L
Sbjct: 44  DVVTYSTIIDSLCKDRRVNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAML 103

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+    +P+ +T+++++   CK G +  A  +L  M+  G EP+V+TY++++      
Sbjct: 104 NEMMSLNIMPNIVTFSLLINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQ 163

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A   +   + KGC P + +Y ILI   CK   I  A ++ ++M  +G +PDIV+Y
Sbjct: 164 AEVFEARKLFDVMITKGCKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSY 223

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  C+ G+  +A  +  N+L+ G  P+  TY+ LL     +G      ++   M  
Sbjct: 224 NTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDGFCKQGYLAKAFRLFRAMQS 283

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
               P +  YNILI+ +CK   +  A   F+++  +  QP++
Sbjct: 284 TYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPNM 325



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 72/247 (29%), Positives = 134/247 (54%)

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +++RG +P+  TY T+++ L   G   A   +   M EA   P V TY+ +I+ LCK   
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           V+ A++ F+ M +K   P+I TYN+++  LC      EA  +L+ +   +  P ++T++ 
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNIMPNIVTFSL 120

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+   K+G + +A  +   M E G+ P+ +T+ +L+ G+    +V EA  L   +  +G
Sbjct: 121 LINIFCKEGNVFEARGVLKTMTEMGVEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKG 180

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K    +Y ++I+G CK+K++  A Q+   MI     PD   ++T++  +   G   EA+
Sbjct: 181 CKPDVFSYNILINGYCKAKRIGEAKQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAH 240

Query: 558 KLWQKLI 564
            L++ ++
Sbjct: 241 DLFKNML 247



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 50/181 (27%), Positives = 94/181 (51%), Gaps = 2/181 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKA 171
           VE +  T + ++  +  + ++ +A KL D+M  +   PD F + I LI G  +  RI +A
Sbjct: 146 VEPNVVTYSSLMNGYSLQAEVFEARKLFDVMITKGCKPDVFSYNI-LINGYCKAKRIGEA 204

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            ++   M+  G  PD ++YN ++ GLC+ G++R A  L   M  +G  PD+ TY+ +L  
Sbjct: 205 KQLFNEMIHQGLTPDIVSYNTLIDGLCQLGRLREAHDLFKNMLTNGNLPDLCTYSILLDG 264

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G   +A   ++        P ++ Y ILI+ +CK   +  A ++  ++ ++G  P+
Sbjct: 265 FCKQGYLAKAFRLFRAMQSTYLKPNMVMYNILIDAMCKSRNLKEARKLFSELFVQGLQPN 324

Query: 292 I 292
           +
Sbjct: 325 M 325



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 25/111 (22%), Positives = 55/111 (49%)

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+  G  PD  T+ T+I G C+  +   A  L K++G+ G +     Y  +I  LCK ++
Sbjct: 1   MVARGYQPDVHTYTTIINGLCKIGETVAAAGLFKKMGEAGCQPDVVTYSTIIDSLCKDRR 60

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           V+ A+ +   M +    P+   ++++++ + +     EA  +  +++   +
Sbjct: 61  VNEALDIFSYMKAKGISPNIFTYNSLIQGLCNFSRWREASAMLNEMMSLNI 111


>gi|262316881|emb|CAZ44330.1| homologue to restoring pentatricopeptide repeat protein [Raphanus
           sativus]
          Length = 686

 Score =  204 bits (518), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 133/473 (28%), Positives = 223/473 (47%), Gaps = 48/473 (10%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKA 171
           ++ ++ T   I+   C  G    A  L+  M   + I P+      +I GL +  R   A
Sbjct: 213 LQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDA 272

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M      PD +TYN M+ G C  G+   A  LL EM      PDV+T++ ++  
Sbjct: 273 HNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSALINA 332

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               GKF +A   + + L +   P  +TY+ +I+  CKQ  +  A  +      +GCSPD
Sbjct: 333 FVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPD 392

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           I+T+N+L+   C+  + DD + +++ +   G+  N+ITY TL+H     G  +A   +L 
Sbjct: 393 IITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQ 452

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM---------------VSKNCQ-- 394
            M  +   P V T N L++GLC  G +  A+  F  M               V  + Q  
Sbjct: 453 EMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTY 512

Query: 395 -----------------------------PDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
                                        PD +TY++++  LCK+  L+EA Q+   +  
Sbjct: 513 NILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGS 572

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
            S SP ++T+NTLI G  K G ++  + L+ +M + GI  D IT+ TLI+GF + D ++ 
Sbjct: 573 KSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVDNIDG 632

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE-LMISSRYKPDD 537
           A+D+ +E+   G        R ++ GL   ++++ A+ +LE L +S  Y+ +D
Sbjct: 633 ALDIFQEMISSGVYPDTITIRNMLTGLWSKEELERAVAMLEDLQMSVGYQLED 685



 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 132/485 (27%), Positives = 229/485 (47%), Gaps = 51/485 (10%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ FCS  KL  A      + +    P       L+ GL   DRI +A  +   M    
Sbjct: 122 LMKCFCSCSKLPFALSTFGKITKLGFHPTVVTFNTLLHGLCVEDRISEALDLFHQMCK-- 179

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +T+  ++ GLC+ G++  A+ALLD M   G +P+ ITY TI+  M   G    A+
Sbjct: 180 --PNVVTFTTLMNGLCREGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMGDTVSAL 237

Query: 243 GFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +         P ++ Y  +I+ + K    + A  +  +M  +   PDIVTYN ++N 
Sbjct: 238 NLLRKMEEVSHIIPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMING 297

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G++ DA  ++  +L R + P+ +T++ L+++    G +   +++ D M   S  P+
Sbjct: 298 FCISGRWSDAEQLLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPS 357

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TY+ +I+G CK   +D A + F    +K C PDI+T+NT++   C+   +++ ++LLH
Sbjct: 358 TVTYSSMIDGFCKQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLH 417

Query: 422 ----------------LLNG-------------------SSCSPCLITYNTLIDGLAKKG 446
                           L++G                   S   P ++T NTL+DGL   G
Sbjct: 418 EMTEAGLVANTITYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNG 477

Query: 447 CMEKAMVLYGQMME-----------NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
            ++ A+ ++  M +           NG+ PD  T+  LI G     +  EA +L +E+  
Sbjct: 478 KLKDALEMFKAMQKSKMDIDASRPFNGVEPDVQTYNILICGLINEGKFLEAEELYEEMPH 537

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           RG       Y  +I GLCK  ++D A Q+ + M S  + PD   F+T++      GM ++
Sbjct: 538 RGIVPDTITYSSMIDGLCKQSRLDEATQMFDSMGSKSFSPDVVTFNTLITGYCKAGMVDD 597

Query: 556 AYKLW 560
             +L+
Sbjct: 598 GLELF 602



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/485 (27%), Positives = 238/485 (49%), Gaps = 31/485 (6%)

Query: 95  TITKKSHDPSLPSSDGPFVENDEK----TNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           T+ KKS D           E+DE      + K+   F     L DA  L   M R   +P
Sbjct: 30  TLAKKSRDG----------ESDEAGFGGESLKLQSGFHEIKGLDDAIDLFGYMVRSRPLP 79

Query: 151 D-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
               FC  L+  ++R+ R +    + + M M     +  ++ +++   C   ++  A++ 
Sbjct: 80  SVIDFC-KLMGVVVRMGRPDVVISLHKKMEMLRMPCNAYSFTILMKCFCSCSKLPFALST 138

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
             +++  G  P V+T+NT+L  +    +  +A+    D   + C P ++T+T L+  +C+
Sbjct: 139 FGKITKLGFHPTVVTFNTLLHGLCVEDRISEAL----DLFHQMCKPNVVTFTTLMNGLCR 194

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME----- 324
           +  +  A+ +LD M  +G  P+ +TY ++V+  CK G   D V  +N  L R ME     
Sbjct: 195 EGRVVEAVALLDRMLEDGLQPNQITYGTIVDGMCKMG---DTVSALN--LLRKMEEVSHI 249

Query: 325 -PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN + YNT++  L   G       +   M E    P + TYN +ING C  G    A  
Sbjct: 250 IPNVVIYNTIIDGLWKDGRHSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQ 309

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              +M+ +   PD+VT++ ++ A  KEG   EA +L   +   S  P  +TY+++IDG  
Sbjct: 310 LLQEMLERKINPDVVTFSALINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFC 369

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K+  ++ A  ++      G SPD IT  TLI G+CRA +V++ + LL E+ + G      
Sbjct: 370 KQNRLDAAEHMFYLTPTKGCSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTI 429

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +IHG C+   ++ A  +L+ MISS   P+    +T++  + D+G  ++A ++++ +
Sbjct: 430 TYTTLIHGFCQVGDLNAAQDLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAM 489

Query: 564 IEWKV 568
            + K+
Sbjct: 490 QKSKM 494



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 134/504 (26%), Positives = 234/504 (46%), Gaps = 51/504 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   C   ++++A  L   M + N +        L+ GL R  R+ +A  +L  M
Sbjct: 153 TFNTLLHGLCVEDRISEALDLFHQMCKPNVVT----FTTLMNGLCREGRVVEAVALLDRM 208

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDNGK 237
           +  G  P+ ITY  +V G+CK G   SA+ LL +M  VS   P+V+ YNTI+  ++ +G+
Sbjct: 209 LEDGLQPNQITYGTIVDGMCKMGDTVSALNLLRKMEEVSHIIPNVVIYNTIIDGLWKDGR 268

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A   + +   K   P ++TY  +I   C     + A ++L +M     +PD+VT+++
Sbjct: 269 HSDAHNLFIEMQEKEIFPDIVTYNCMINGFCISGRWSDAEQLLQEMLERKINPDVVTFSA 328

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD---------- 347
           L+N   K+GK+ +A  + + +L R + P+++TY++++     +   DA +          
Sbjct: 329 LINAFVKEGKFFEAEELYDEMLPRSIIPSTVTYSSMIDGFCKQNRLDAAEHMFYLTPTKG 388

Query: 348 -------------------------KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
                                    K+L  M EA       TY  LI+G C+ G ++ A 
Sbjct: 389 CSPDIITFNTLIAGYCRAKRVDDGIKLLHEMTEAGLVANTITYTTLIHGFCQVGDLNAAQ 448

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS-----------SCSPC 431
           +   +M+S    P++VT NT+L  LC  G L +AL++   +  S              P 
Sbjct: 449 DLLQEMISSGVCPNVVTCNTLLDGLCDNGKLKDALEMFKAMQKSKMDIDASRPFNGVEPD 508

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           + TYN LI GL  +G   +A  LY +M   GI PD IT+ ++I G C+  +++EA  +  
Sbjct: 509 VQTYNILICGLINEGKFLEAEELYEEMPHRGIVPDTITYSSMIDGLCKQSRLDEATQMFD 568

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            +G +        +  +I G CK+  VD  +++   M       D   + T++       
Sbjct: 569 SMGSKSFSPDVVTFNTLITGYCKAGMVDDGLELFCEMGQRGIVADAITYITLIYGFRKVD 628

Query: 552 MTEEAYKLWQKLIEWKVFEKGTTL 575
             + A  ++Q++I   V+    T+
Sbjct: 629 NIDGALDIFQEMISSGVYPDTITI 652


>gi|449500717|ref|XP_004161177.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g02060, chloroplastic-like [Cucumis sativus]
          Length = 720

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 124/426 (29%), Positives = 217/426 (50%), Gaps = 12/426 (2%)

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
           F  +L+R   R    +++ KV  IM   G  P  +T+N ++  L KRG+   A  + DEM
Sbjct: 151 FFNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEM 210

Query: 214 -SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
            S  G  PD  T+N ++R    NG        + D  R GC P ++TY  L++ +C+   
Sbjct: 211 LSTYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGK 270

Query: 273 IARAIEVLDDMAIEGC--SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           +  A  V+  M  +    +P++VTY +L+   C + + + A+ V   ++++G++ N+ITY
Sbjct: 271 VTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITY 330

Query: 331 NTLLHSLGSRGCWDAVDKILD-IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           NTL+  L     ++ +  IL+    + + SP   T+N L++  C  G +D A+  F +M 
Sbjct: 331 NTLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMS 390

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-------LLNGSSCSPCLITYNTLIDGL 442
               QPD  TY+ ++ +LC+ G   +A  LL        LL+G  C P +  YN +   L
Sbjct: 391 ELKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYL 450

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            + G  +KA   + Q+M  G + D  +++TLI G C+    E   +LL  + ++      
Sbjct: 451 CETGKTKKAEKAFRQLMRRG-TQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDF 509

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  +I+GL    K  +A+Q LE M+ S ++P+ + F +I+ K+ + G   E+  L Q 
Sbjct: 510 ETYESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQL 569

Query: 563 LIEWKV 568
           +++  +
Sbjct: 570 MLDKNI 575



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 89/282 (31%), Positives = 155/282 (54%), Gaps = 4/282 (1%)

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD-IM 353
           +NSL+    + G + +++ V   + S G+ P+ +T+N+LL  L  RG  +   K+ D ++
Sbjct: 152 FNSLMRNFNRAGLFQESIKVFTIMKSHGVSPSVVTFNSLLTILLKRGRTNMAKKVYDEML 211

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +    +P  FT+NILI G C  G+VD     FN +    C+PD+VTYNT++  LC+ G +
Sbjct: 212 STYGVTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEPDVVTYNTLVDGLCRAGKV 271

Query: 414 NEALQLLHLLNGSSC--SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             A  ++  +   S   +P ++TY TLI G   K  +EKA+ ++ +M+  G+  ++IT+ 
Sbjct: 272 TVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALAVFEEMVNQGLKANNITYN 331

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMIS 530
           TLI G C A + E+  D+L+     G    ++  +  ++H  C +  +D A++V E M  
Sbjct: 332 TLIKGLCEARKFEKIKDILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSE 391

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
            + +PD   +S +V+ +   G  E+A  L  KL+E K+   G
Sbjct: 392 LKIQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSG 433



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 227/523 (43%), Gaps = 82/523 (15%)

Query: 92  RGLT-ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           RG T + KK +D  L +     V  D  T N +++ FC  G + D  ++ + ++R    P
Sbjct: 197 RGRTNMAKKVYDEMLSTYG---VTPDTFTFNILIRGFCMNGMVDDGFRIFNDLSRFGCEP 253

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIA 208
           D      L+ GL R  ++  A  V++ M        P+ +TY  ++ G C + +I  A+A
Sbjct: 254 DVVTYNTLVDGLCRAGKVTVAYNVVKGMGKKSVDLNPNVVTYTTLIRGYCAKREIEKALA 313

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           + +EM   G + + ITYNT+++ + +  KF++     KD                     
Sbjct: 314 VFEEMVNQGLKANNITYNTLIKGLCEARKFEKI----KD--------------------- 348

Query: 269 KQCGIARAIEVLDDMAIEGC-SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                     +L+  A +G  SPD  T+N+L++  C  G  DDA+ V   +    ++P+S
Sbjct: 349 ----------ILEGTAGDGTFSPDTCTFNTLMHCHCHAGNLDDALKVFERMSELKIQPDS 398

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASH-------SPTVFTYNILINGLCKYGLVDR 380
            TY+ L+ SL   G ++  + +LD + E           P V  YN +   LC+ G   +
Sbjct: 399 ATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCETGKTKK 458

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A  +F Q++ +  Q D  +Y T++   CKEG      +LL L+      P   TY +LI+
Sbjct: 459 AEKAFRQLMRRGTQ-DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLIN 517

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR---- 496
           GL        A+    +M+ +   P+  T  +++       +  E+  L++ +  +    
Sbjct: 518 GLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQ 577

Query: 497 -------------GNKMRNSAYRLV---------------IHGLCKSKKVDMAIQVLELM 528
                        G  M + A++LV               I  LC  +KV    ++L   
Sbjct: 578 NLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGYSVKMEELIRYLCHCRKVIQGSKLLLFS 637

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           + S    D  + +T++ ++ +     EA+ L+ KL+E  V ++
Sbjct: 638 LESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQ 680



 Score = 49.3 bits (116), Expect = 0.005,   Method: Compositional matrix adjust.
 Identities = 63/313 (20%), Positives = 121/313 (38%), Gaps = 15/313 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI-------RGLIRI 165
           ++ D  T + ++++ C  G    A  L+D +  R  +     C  L+       + L   
Sbjct: 394 IQPDSATYSALVRSLCQGGHYEKAEDLLDKLLERKILLSGDGCKPLVAAYNPIFKYLCET 453

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
            + +KA K  +  +M  G  D  +Y  ++ G CK G   S   LL  M      PD  TY
Sbjct: 454 GKTKKAEKAFR-QLMRRGTQDPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETY 512

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
            +++  +    K   A+   +  LR    P   T+  ++ ++ +Q   + +  ++  M  
Sbjct: 513 ESLINGLLHMDKPLLALQSLEKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLD 572

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +    ++      V      G  D A  +++ L  +G    S+    L+  L    C   
Sbjct: 573 KNIRQNLSFSTGCVRLLFGAGMNDKAFQLVHLLYGKGY---SVKMEELIRYLCH--CRKV 627

Query: 346 V--DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           +   K+L    E+     +   N +I  LC+   +  A + + ++V       +   N +
Sbjct: 628 IQGSKLLLFSLESHQFVDMDLCNTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQL 687

Query: 404 LGALCKEGMLNEA 416
             +L   G L EA
Sbjct: 688 KVSLKAGGKLEEA 700



 Score = 46.6 bits (109), Expect = 0.039,   Method: Compositional matrix adjust.
 Identities = 47/234 (20%), Positives = 98/234 (41%), Gaps = 3/234 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  +   ++   C  G      +L+ +M R++  PDF    +LI GL+ +D+   A + L
Sbjct: 473 DPPSYKTLIMGHCKEGTFESGYELLVLMLRKDFXPDFETYESLINGLLHMDKPLLALQSL 532

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+ S   P++ T++ ++  L ++G+   + +L+  M       ++      +R +F  
Sbjct: 533 EKMLRSSHRPNSSTFHSILAKLLEQGRASESASLIQLMLDKNIRQNLSFSTGCVRLLFGA 592

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A         KG   Y +    LI  +C    + +  ++L          D+   
Sbjct: 593 GMNDKAFQLVHLLYGKG---YSVKMEELIRYLCHCRKVIQGSKLLLFSLESHQFVDMDLC 649

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           N+++   C+  K  +A  +   L+  G+       N L  SL + G  +  + +
Sbjct: 650 NTVIFQLCEINKLSEAFSLYYKLVEMGVHQQLSCQNQLKVSLKAGGKLEEAESV 703


>gi|357138611|ref|XP_003570884.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g17140-like [Brachypodium distachyon]
          Length = 864

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 228/468 (48%), Gaps = 32/468 (6%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM-- 178
           N ++  FC  G++ +A +L+D M  +   P+       I  L +  R+ +A ++   M  
Sbjct: 209 NTVVAGFCREGRVDEAERLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQE 268

Query: 179 VMSGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
               G+P  D +T+++M+ G C  G +  A  L+D M   G    V +YN  L  +  NG
Sbjct: 269 AWEQGLPRPDQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNG 328

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC-SPDIVTY 295
           +  +A     +   +G  P   TY I+++ +CK+ G A  +  ++D    G  +PD+VTY
Sbjct: 329 RVGEAQELLSEMAHEGVQPNSYTYNIIVDGLCKE-GKAFDVRRVEDFVRSGVMTPDVVTY 387

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            SL++  C +G    A  +++ +  +G  PN  TYN LL SL   G    V+++L+ M+E
Sbjct: 388 TSLLHAYCSKGNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSE 447

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAI------------------NSFNQMVS-----KN 392
             +S    + NI+I+GLC+   ++ A+                  NSF  +VS     K+
Sbjct: 448 KGYSLDTASCNIIIDGLCRNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKS 507

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C PD +TY+T++ ALCKEG  +EA + L  + G   SP  + Y+T I G    G    A+
Sbjct: 508 CLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAI 567

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            +   M +   +P   ++  LIWGF    + +E + L+ E+ ++G       Y  +I   
Sbjct: 568 KVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSF 627

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK---KVADDGMTEEAY 557
           C    V+ A+ +L+ M+ +   P+ T F  ++K   K AD    +  +
Sbjct: 628 CGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVF 675



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 127/487 (26%), Positives = 231/487 (47%), Gaps = 31/487 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E ++  + + +C  G+  DA  ++D M   N +     C  ++ G  R  R+++A +++
Sbjct: 173 NEFSSGILARGYCRAGRSADALAVLDAMPEMNLV----VCNTVVAGFCREGRVDEAERLV 228

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE----PDVITYNTILRT 231
             M   G  P+ +T+N  +  LCK G++  A  + ++M  +  +    PD +T++ +L  
Sbjct: 229 DRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVMLSG 288

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
             D G   +A          G    + +Y   +  + K   +  A E+L +MA EG  P+
Sbjct: 289 FCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGVQPN 348

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
             TYN +V+  CK+GK  D   V + + S  M P+ +TY +LLH+  S+G   A ++ILD
Sbjct: 349 SYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANRILD 408

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK-- 409
            M +   +P +FTYN+L+  L K G          +M  K    D  + N ++  LC+  
Sbjct: 409 EMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLCRNS 468

Query: 410 ---------EGMLNEALQLLHLLNGS------------SCSPCLITYNTLIDGLAKKGCM 448
                    +GM NE    L  L  S            SC P  ITY+TL++ L K+G  
Sbjct: 469 KLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKEGRF 528

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           ++A     +M+   ISPD + + T I G+C   +   A+ +L+++ KR       +Y L+
Sbjct: 529 DEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLL 588

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           I G  + +K D  ++++  M       +   +++++K     GM  +A  L  ++++ ++
Sbjct: 589 IWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEI 648

Query: 569 FEKGTTL 575
               T+ 
Sbjct: 649 VPNVTSF 655



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 116/416 (27%), Positives = 202/416 (48%), Gaps = 12/416 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T + +L  FC  G + +A+ L+DIM     +         + GL++  R+ +A ++L
Sbjct: 278 DQVTFDVMLSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELL 337

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P++ TYN++V GLCK G+      + D +      PDV+TY ++L      
Sbjct: 338 SEMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSK 397

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A     +  +KGC P L TY +L++ + K         +L+ M+ +G S D  + 
Sbjct: 398 GNTTAANRILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASC 457

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N +++  C+  K + A+ +++ + + G           L  LG+      V  + D    
Sbjct: 458 NIIIDGLCRNSKLEMAMDIVDGMWNEG--------RLALRRLGN----SFVSLVSDSSIS 505

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            S  P   TY+ L+N LCK G  D A     +M+ K+  PD V Y+T +   C  G  + 
Sbjct: 506 KSCLPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSL 565

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+++L  +   SC+P   +YN LI G  +K   ++ + L  +M E GIS + +T+ +LI 
Sbjct: 566 AIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIK 625

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            FC    V +A+ LL E+ +       +++ L+I   CK+     A +V ++ +S+
Sbjct: 626 SFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALST 681



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 106/457 (23%), Positives = 205/457 (44%), Gaps = 21/457 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T N I+   C  GK  D  ++ D +      PD     +L+           A+
Sbjct: 345 VQPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAAN 404

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M   G  P+  TYN+++  L K G+      LL+ MS  G   D  + N I+  +
Sbjct: 405 RILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGL 464

Query: 233 FDNGKFKQAI----GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
             N K + A+    G W +                     ++ G +    V D    + C
Sbjct: 465 CRNSKLEMAMDIVDGMWNEG----------------RLALRRLGNSFVSLVSDSSISKSC 508

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD +TY++L+N  CK+G++D+A   +  ++ + + P+S+ Y+T +H     G      K
Sbjct: 509 LPDRITYSTLMNALCKEGRFDEAKKKLVEMIGKDISPDSVIYDTFIHGYCMHGKTSLAIK 568

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M + S +P+  +YN+LI G  +    D  +   ++M  K    +++TYN+++ + C
Sbjct: 569 VLRDMEKRSCNPSTRSYNLLIWGFQEKQKSDEILKLMSEMKEKGISSNVMTYNSLIKSFC 628

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             GM+N+A+ LL  +  +   P + ++  LI    K      A  ++   +       ++
Sbjct: 629 GRGMVNKAMPLLDEMLQNEIVPNVTSFGLLIKAFCKTADFSAAQRVFDVALST-CGQKEV 687

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            +  +        +  EA ++L+   +    +++  Y+ +I GLC   + D A  +L+L 
Sbjct: 688 LYCLMCTELSTYARWIEAKNILETALEMRISIQSFPYKRIIAGLCDVSEADHAHSLLKLF 747

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           I+  Y  D   F  ++  +++ G   +A  L +K++E
Sbjct: 748 IAKGYSFDPATFMPVIDALSESGKKHDADMLSEKMME 784



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 99/435 (22%), Positives = 199/435 (45%), Gaps = 38/435 (8%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+   +R DR++    + + ++++G  PD  T N ++  L   G++  A  + D M    
Sbjct: 114 LLLAALREDRLDLVEALYKDLLLAGATPDVFTRNALLEALSAAGRMDLARRVFDAMPAR- 172

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              +  +   + R     G+   A+              L+    ++   C++  +  A 
Sbjct: 173 ---NEFSSGILARGYCRAGRSADALAVLDAMPEMN----LVVCNTVVAGFCREGRVDEAE 225

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL---LSRGM-EPNSITYNTL 333
            ++D M  +G +P++VT+N  ++  CK G+  +A  + N++     +G+  P+ +T++ +
Sbjct: 226 RLVDRMRAQGLAPNVVTFNGRISALCKAGRVLEAYRIFNDMQEAWEQGLPRPDQVTFDVM 285

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           L      G  D    ++DIM        V +YN  ++GL K G V  A    ++M  +  
Sbjct: 286 LSGFCDAGMVDEATVLVDIMRCGGFLRKVESYNRWLSGLVKNGRVGEAQELLSEMAHEGV 345

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
           QP+  TYN ++  LCKEG   +  ++   +     +P ++TY +L+     KG    A  
Sbjct: 346 QPNSYTYNIIVDGLCKEGKAFDVRRVEDFVRSGVMTPDVVTYTSLLHAYCSKGNTTAANR 405

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +  +M + G +P+  T+  L+    +A +  E   LL+ + ++G  +  ++  ++I GLC
Sbjct: 406 ILDEMAQKGCAPNLFTYNVLLQSLLKAGRTTEVERLLERMSEKGYSLDTASCNIIIDGLC 465

Query: 514 KSKKVDMAIQVLELM-----------------------ISSRYKPDDTVFSTIVKKVADD 550
           ++ K++MA+ +++ M                       IS    PD   +ST++  +  +
Sbjct: 466 RNSKLEMAMDIVDGMWNEGRLALRRLGNSFVSLVSDSSISKSCLPDRITYSTLMNALCKE 525

Query: 551 GMTEEAYKLWQKLIE 565
           G  +EA K   KL+E
Sbjct: 526 GRFDEAKK---KLVE 537



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 49/246 (19%), Positives = 99/246 (40%), Gaps = 1/246 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D    +  +  +C  GK + A K++  M +R+  P       LI G     + +
Sbjct: 540 GKDISPDSVIYDTFIHGYCMHGKTSLAIKVLRDMEKRSCNPSTRSYNLLIWGFQEKQKSD 599

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +  K++  M   G   + +TYN ++   C RG +  A+ LLDEM  +   P+V ++  ++
Sbjct: 600 EILKLMSEMKEKGISSNVMTYNSLIKSFCGRGMVNKAMPLLDEMLQNEIVPNVTSFGLLI 659

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           +       F  A   + D     C    + Y ++  ++        A  +L+       S
Sbjct: 660 KAFCKTADFSAAQRVF-DVALSTCGQKEVLYCLMCTELSTYARWIEAKNILETALEMRIS 718

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
                Y  ++   C   + D A  ++   +++G   +  T+  ++ +L   G     D +
Sbjct: 719 IQSFPYKRIIAGLCDVSEADHAHSLLKLFIAKGYSFDPATFMPVIDALSESGKKHDADML 778

Query: 350 LDIMNE 355
            + M E
Sbjct: 779 SEKMME 784


>gi|413936859|gb|AFW71410.1| hypothetical protein ZEAMMB73_528560 [Zea mays]
          Length = 671

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 125/480 (26%), Positives = 240/480 (50%), Gaps = 43/480 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++  C+R +L DA ++++ + + +   D      L+ G  R   +  A +V++    
Sbjct: 120 NILIKKLCARRRLADAERVLEAL-KASGAADAVSHNTLVAGYCRDGSLGDAERVVE-AAR 177

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           + G  + +TY  ++ G C+ G++  A+ L+  M V+   PD  TYNT+L+ +    +++Q
Sbjct: 178 ASGTANVVTYTALIDGYCRSGRLADALRLIASMPVA---PDTYTYNTVLKGLCCAKQWEQ 234

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    ++ +R  C P  +T+   I   C+   + RA+E+L+ M   GC+PD++ Y++LVN
Sbjct: 235 AEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVN 294

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              + G+ D+A+ ++N +L R   PN++ YN  L  L   G W+ V +++  M      P
Sbjct: 295 GFSEHGRVDEALKLLNTMLCR---PNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPP 351

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQM---------VSKN------------------- 392
              T++ LIN LC+  LV+ A+    QM         VS N                   
Sbjct: 352 NDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLL 411

Query: 393 ----CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
               C+PD +++N VL  LCK     +A++L+  +    C    +T+N LID L + G +
Sbjct: 412 KSMLCKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQV 471

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           + A+ ++  M +    PD +T+ +LI GF      E A DL + +  R +     +Y   
Sbjct: 472 KDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRADIF---SYNAT 528

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + GLC + + D A +++  M++    P++  F+ ++  +   G+   A  +++++ ++ +
Sbjct: 529 LKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGI 588



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/486 (25%), Positives = 233/486 (47%), Gaps = 73/486 (15%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G+L DA +LI  M      PD +    +++GL    + E+A ++++ M
Sbjct: 186 TYTALIDGYCRSGRLADALRLIASMP---VAPDTYTYNTVLKGLCCAKQWEQAEELMREM 242

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +   P+ +T+   +   C+ G +  A+ LL++M   GC PDVI Y+T++    ++G+ 
Sbjct: 243 IRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVIIYSTLVNGFSEHGRV 302

Query: 239 KQAI-------------------------GFWKD-------QLRKGCPPYLITYTILIEQ 266
            +A+                         G W++        +RK CPP   T++ LI  
Sbjct: 303 DEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINS 362

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN-FS----------------------- 302
           +C+   +  A+EVL+ M   G  PD+V+YN++++ FS                       
Sbjct: 363 LCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARADDALKLLKSMLCKPDTIS 422

Query: 303 --------CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
                   CK  ++ DAV ++  +L +    N +T+N L+ SL   G      ++ ++M 
Sbjct: 423 FNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMP 482

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P + TY+ LING  + GL + A + F  M    C+ DI +YN  L  LC     +
Sbjct: 483 KYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSM---PCRADIFSYNATLKGLCMAARWD 539

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A +L+  +    C P  +T+N LI  L +KG + +A+ +Y QM + GI+PD  T+  LI
Sbjct: 540 DAGELIADMVTEDCLPNEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALI 599

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+    ++++A+  L  +    + +   +Y  ++ GLC++++   A +++  M+     
Sbjct: 600 NGYSEQGRLDDALKFLSTMPCEPDTI---SYNSILKGLCRAERWKDAEKLVTEMLRKNCT 656

Query: 535 PDDTVF 540
           P++  F
Sbjct: 657 PNEVTF 662



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 181/351 (51%), Gaps = 9/351 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  L+  C  G+  +  +LI  M R++  P+      LI  L +   +E A +VL+ M  
Sbjct: 322 NAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQK 381

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +PD ++YN ++     + +   A+ LL  M    C+PD I++N +L+ +    ++  
Sbjct: 382 YGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYD 438

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+      L+K C    +T+ ILI+ +C+   +  AIEV + M    C PDIVTY+SL+N
Sbjct: 439 AVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLIN 498

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +QG  + A  +  ++  R    +  +YN  L  L     WD   +++  M      P
Sbjct: 499 GFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLP 555

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+NILI+ LC+ GLV+RAI+ + QM      PDI TYN ++    ++G L++AL+ L
Sbjct: 556 NEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFL 615

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             +    C P  I+YN+++ GL +    + A  L  +M+    +P+++T +
Sbjct: 616 STM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 663



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 110/429 (25%), Positives = 213/429 (49%), Gaps = 16/429 (3%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P    C  LI+ L    R+  A +VL+ +  SG   D +++N +V G C+ G +  A  +
Sbjct: 114 PAVISCNILIKKLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAERV 172

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP--PYLITYTILIEQV 267
           ++    SG   +V+TY  ++     +G+   A+     +L    P  P   TY  +++ +
Sbjct: 173 VEAARASG-TANVVTYTALIDGYCRSGRLADAL-----RLIASMPVAPDTYTYNTVLKGL 226

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C      +A E++ +M    C P+ VT+ + +   C+ G  D AV ++  +   G  P+ 
Sbjct: 227 CCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDV 286

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           I Y+TL++     G    VD+ L ++N     P    YN  + GLC  G  +       +
Sbjct: 287 IIYSTLVNGFSEHG---RVDEALKLLNTMLCRPNTVCYNAALKGLCIAGRWEEVGELIAE 343

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           MV K+C P+  T++T++ +LC+  ++  A+++L  +      P +++YNT+I   + +  
Sbjct: 344 MVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQAR 403

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            + A+ L   M+     PD I+   ++   C+A +  +AV+L+ ++ K+  ++    + +
Sbjct: 404 ADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYDAVELVAKMLKKDCRINEMTFNI 460

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL-IEW 566
           +I  LC++ +V  AI+V ELM   R  PD   +S+++   ++ G+ E A+ L++ +    
Sbjct: 461 LIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQGLDEMAFDLFRSMPCRA 520

Query: 567 KVFEKGTTL 575
            +F    TL
Sbjct: 521 DIFSYNATL 529



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 87/311 (27%), Positives = 168/311 (54%), Gaps = 8/311 (2%)

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
           PP +I+  ILI+++C +  +A A  VL+ +   G + D V++N+LV   C+ G   DA  
Sbjct: 113 PPAVISCNILIKKLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSLGDAER 171

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           V+    + G   N +TY  L+      G    +   L ++     +P  +TYN ++ GLC
Sbjct: 172 VVEAARASGTA-NVVTYTALIDGYCRSG---RLADALRLIASMPVAPDTYTYNTVLKGLC 227

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
                ++A     +M+  +C P+ VT+ T + A C+ G+L+ A++LL  +    C+P +I
Sbjct: 228 CAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGCTPDVI 287

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            Y+TL++G ++ G +++A+ L   M+     P+ + +   + G C A + EE  +L+ E+
Sbjct: 288 IYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLCIAGRWEEVGELIAEM 344

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            ++     ++ +  +I+ LC+++ V+ A++VLE M    Y PD   ++TI+   +D    
Sbjct: 345 VRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVVSYNTIISCFSDQARA 404

Query: 554 EEAYKLWQKLI 564
           ++A KL + ++
Sbjct: 405 DDALKLLKSML 415



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/211 (27%), Positives = 105/211 (49%), Gaps = 5/211 (2%)

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           + A   P V + NILI  LC    +  A      + +     D V++NT++   C++G L
Sbjct: 108 DSAPEPPAVISCNILIKKLCARRRLADAERVLEALKASGAA-DAVSHNTLVAGYCRDGSL 166

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +A +++     S  +  ++TY  LIDG  + G +  A+ L   M    ++PD  T+ T+
Sbjct: 167 GDAERVVEAARASGTAN-VVTYTALIDGYCRSGRLADALRLIASM---PVAPDTYTYNTV 222

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           + G C A Q E+A +L++E+ +         +   I   C++  +D A+++LE M     
Sbjct: 223 LKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVELLEQMPKYGC 282

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            PD  ++ST+V   ++ G  +EA KL   ++
Sbjct: 283 TPDVIIYSTLVNGFSEHGRVDEALKLLNTML 313



 Score = 56.6 bits (135), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 41/148 (27%), Positives = 68/148 (45%), Gaps = 9/148 (6%)

Query: 82  SHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVEND----EKTNNKILQNFCSRGKLTDAS 137
           + + + N  L+GL +  +  D     +D   V  D    E T N ++ + C +G +  A 
Sbjct: 520 ADIFSYNATLKGLCMAARWDDAGELIAD--MVTEDCLPNEVTFNILISSLCQKGLVNRAI 577

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
            + + M +    PD      LI G     R++ A K L  M      PDTI+YN ++ GL
Sbjct: 578 DVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCE---PDTISYNSILKGL 634

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITY 225
           C+  + + A  L+ EM    C P+ +T+
Sbjct: 635 CRAERWKDAEKLVTEMLRKNCTPNEVTF 662


>gi|224137250|ref|XP_002327079.1| predicted protein [Populus trichocarpa]
 gi|222835394|gb|EEE73829.1| predicted protein [Populus trichocarpa]
          Length = 795

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 144/515 (27%), Positives = 230/515 (44%), Gaps = 71/515 (13%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           IL+ +  +G + +A  + D M +  + P    C +L+  L++      A  V   M    
Sbjct: 2   ILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRLD 61

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD  T  +MV   CK G++  A+  + EM   G E + ++YN+++      G  + A 
Sbjct: 62  IVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGAK 121

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNF 301
           G  K    KG     +T T+LI+  CKQC +  A +VL +M  E G   D   Y +L++ 
Sbjct: 122 GVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALIDG 181

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK GK  DA+ V + +L  G++ N    N+L++     G     +++L  M +    P 
Sbjct: 182 YCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKPD 241

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++Y  L++G C+ GL  +A N  +QM+ K  +P +VTYNT+L  LC+ G   +AL+L H
Sbjct: 242 SYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLWH 301

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS----------------- 464
           L+     +P  + Y TL+DGL K G   +A+ L+  ++  GI+                 
Sbjct: 302 LMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKMG 361

Query: 465 ------------------PDDITHRTLIWGFCRADQVEEA-------------------- 486
                             PD IT+RTL  G+C+   VEEA                    
Sbjct: 362 EMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYN 421

Query: 487 ---------------VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
                          +DLL E+  RG       Y  +I G C   ++D A      MI  
Sbjct: 422 SLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGK 481

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            + P+  + S IV  +   G  +EA  L QK++++
Sbjct: 482 GFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDF 516



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 214/480 (44%), Gaps = 43/480 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+  C  G   DA +L  +M +R   P+      L+ GL ++    +A  +   +
Sbjct: 279 TYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDI 338

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G       +N M+ GLCK G++  A      M   GC+PD ITY T+       G  
Sbjct: 339 LARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNV 398

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A    +   ++   P +  Y  LI  +     I++ I++L +M   G SP++VTY +L
Sbjct: 399 EEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGAL 458

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG----------------- 341
           +   C QG+ D A      ++ +G  PN I  + ++ SL   G                 
Sbjct: 459 IAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDL 518

Query: 342 -------------------CWDAVDKILDIMNEAS---HSPTVFTYNILINGLCKYGLVD 379
                              CW    KI D ++E++     P    YNI + GLCK G V+
Sbjct: 519 VLDHRCLEDFQNADIRKLDCW----KIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVN 574

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A   F  +   +  PD  TY T++      G +NEA  L   +      P + TYN L+
Sbjct: 575 DARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALL 634

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +GL K G +++A  L+ ++   G+ P+ +T+  LI G+C++    EA+DL  ++ K G  
Sbjct: 635 NGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGIS 694

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +I+G CK   V+ A+++L  M +S        FS +V+     G  ++  KL
Sbjct: 695 PSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSKL 754



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 131/531 (24%), Positives = 231/531 (43%), Gaps = 72/531 (13%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           +   DG  V  DE     ++  +C  GK+ DA ++ D M +     +   C +LI G  +
Sbjct: 162 MEKEDGVVV--DEYAYGALIDGYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCK 219

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             ++ +  ++L  M      PD+ +Y  +V G C+ G    A  + D+M   G EP V+T
Sbjct: 220 NGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVT 279

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YNT+L+ +   G +K A+  W   L++G  P  + Y  L++ + K    +RA+ + DD+ 
Sbjct: 280 YNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDIL 339

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             G +  I  +N+++N  CK G+ D A      +   G +P+ ITY TL       G  +
Sbjct: 340 ARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVE 399

Query: 345 --------------------------------AVDKILDIMNEASH---SPTVFTYNILI 369
                                            + K++D++ E      SP V TY  LI
Sbjct: 400 EAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSPNVVTYGALI 459

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-------- 421
            G C  G +D+A +++ +M+ K   P+++  + ++ +L + G ++EA  LL         
Sbjct: 460 AGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVDFDLV 519

Query: 422 ------------------------LLNGSSCS---PCLITYNTLIDGLAKKGCMEKAMVL 454
                                    L+ S+     P  + YN  + GL K G +  A   
Sbjct: 520 LDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKVNDARRF 579

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +  +     +PD+ T+ TLI GF  A  V EA +L  E+  +G     + Y  +++GLCK
Sbjct: 580 FLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNALLNGLCK 639

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           S  +D A ++ + +      P+   ++ ++      G   EA  L  K+++
Sbjct: 640 SGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLK 690



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 124/513 (24%), Positives = 211/513 (41%), Gaps = 70/513 (13%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G++ +  +L+  M + +  PD +    L+ G  R     KA  V   M+ 
Sbjct: 211 NSLINGYCKNGQVHEGERLLMCMRKLDLKPDSYSYCTLVDGYCRDGLSSKAFNVCDQMLR 270

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  +TYN ++ GLC+ G  + A+ L   M   G  P+ + Y T+L  +F  G F +
Sbjct: 271 KGIEPTVVTYNTLLKGLCRFGDYKDALRLWHLMLQRGVTPNEVGYCTLLDGLFKMGDFSR 330

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  W D L +G    +  +  +I  +CK   +  A E    M   GC PD +TY +L +
Sbjct: 331 ALTLWDDILARGINKSIYAFNTMINGLCKMGEMDGAKETFKRMEELGCKPDGITYRTLSD 390

Query: 301 FSCKQGKYDDA---------------VLVINNLL--------------------SRGMEP 325
             CK G  ++A               + + N+L+                    +RG+ P
Sbjct: 391 GYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLLAEMDTRGLSP 450

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N +TY  L+     +G  D        M     +P V   + +++ L + G +D A    
Sbjct: 451 NVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLL 510

Query: 386 NQMVS-----------------------------------KNCQPDIVTYNTVLGALCKE 410
            +MV                                    K   P+ V YN  +  LCK 
Sbjct: 511 QKMVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKS 570

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G +N+A +    L+  S +P   TY TLI G +  G + +A  L  +M+  G+ P+  T+
Sbjct: 571 GKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTY 630

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             L+ G C++  ++ A  L  ++  +G       Y ++I G CKS     A+ +   M+ 
Sbjct: 631 NALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLK 690

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
               P    +S+++         EEA KL  ++
Sbjct: 691 EGISPSIITYSSLINGFCKQSDVEEAMKLLNEM 723



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 103/370 (27%), Positives = 174/370 (47%), Gaps = 18/370 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +   +C  G + +A K+ + M +    P      +LI GL    +I K   +L
Sbjct: 381 DGITYRTLSDGYCKVGNVEEAFKIKEKMEKEEIFPSIEMYNSLIVGLFTSKKISKLIDLL 440

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ +TY  ++ G C +G++  A +   EM   G  P+VI  + I+ +++  
Sbjct: 441 AEMDTRGLSPNVVTYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRL 500

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC---------KQCGIARAIEVLDDMAIE 286
           G+  +A    +          ++ + ++++  C         ++    +  + LD+ AI+
Sbjct: 501 GRIDEANMLLQK---------MVDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIK 551

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
              P+ V YN  +   CK GK +DA      L      P++ TY TL+H   + G  +  
Sbjct: 552 FSLPNNVVYNIAMAGLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEA 611

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             + D M      P + TYN L+NGLCK G +DRA   F+++  K   P++VTYN ++  
Sbjct: 612 FNLRDEMVNKGLVPNITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDG 671

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK G   EAL L   +     SP +ITY++LI+G  K+  +E+AM L  +M  + +   
Sbjct: 672 YCKSGSPREALDLRGKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQT 731

Query: 467 DITHRTLIWG 476
             T   L+ G
Sbjct: 732 IATFSKLVEG 741



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 97/402 (24%), Positives = 183/402 (45%), Gaps = 36/402 (8%)

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           M++    ++G +++A+ + D M   G +P + + N++L  +   G+   A+  +    R 
Sbjct: 1   MILKVYAEKGMVKNALHVFDNMGKYGRKPSLRSCNSLLSNLVKRGESYSAVLVYDQMRRL 60

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
              P + T  I++   CK   + RA+E + +M   G   + V+YNSLV+     G  + A
Sbjct: 61  DIVPDVFTCAIMVNAYCKAGKVERAVEFVREMEKLGFELNAVSYNSLVDGYVSLGDIEGA 120

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL-DIMNEASHSPTVFTYNILIN 370
             V+  +  +G+  N +T   L+     +   +  +K+L ++  E       + Y  LI+
Sbjct: 121 KGVLKFMSEKGVMRNKVTLTLLIKGYCKQCKVEEAEKVLREMEKEDGVVVDEYAYGALID 180

Query: 371 GLCKYGLVDRAINSFNQMVS------------------KNCQ-----------------P 395
           G CK G +  AI   ++M+                   KN Q                 P
Sbjct: 181 GYCKVGKMGDAIRVRDEMLKVGLKMNLFVCNSLINGYCKNGQVHEGERLLMCMRKLDLKP 240

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D  +Y T++   C++G+ ++A  +   +      P ++TYNTL+ GL + G  + A+ L+
Sbjct: 241 DSYSYCTLVDGYCRDGLSSKAFNVCDQMLRKGIEPTVVTYNTLLKGLCRFGDYKDALRLW 300

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M++ G++P+++ + TL+ G  +      A+ L  +I  RG      A+  +I+GLCK 
Sbjct: 301 HLMLQRGVTPNEVGYCTLLDGLFKMGDFSRALTLWDDILARGINKSIYAFNTMINGLCKM 360

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            ++D A +  + M     KPD   + T+       G  EEA+
Sbjct: 361 GEMDGAKETFKRMEELGCKPDGITYRTLSDGYCKVGNVEEAF 402



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 74/305 (24%), Positives = 137/305 (44%), Gaps = 35/305 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C +G+L  A      M  +   P+   C  ++  L R+ RI++A+ +LQ M
Sbjct: 454 TYGALIAGWCDQGRLDKAFSAYFEMIGKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 513

Query: 179 V-----------------------------------MSGGVPDTITYNMMVGGLCKRGQI 203
           V                                   +   +P+ + YN+ + GLCK G++
Sbjct: 514 VDFDLVLDHRCLEDFQNADIRKLDCWKIADTLDESAIKFSLPNNVVYNIAMAGLCKSGKV 573

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A      +S     PD  TY T++      G   +A     + + KG  P + TY  L
Sbjct: 574 NDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVPNITTYNAL 633

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           +  +CK   + RA  + D + ++G  P++VTYN L++  CK G   +A+ +   +L  G+
Sbjct: 634 LNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLRGKMLKEGI 693

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ ITY++L++    +   +   K+L+ M  ++   T+ T++ L+ G  ++G V +   
Sbjct: 694 SPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQHGDVKKMSK 753

Query: 384 SFNQM 388
             N M
Sbjct: 754 LHNMM 758



 Score = 97.1 bits (240), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/205 (27%), Positives = 100/205 (48%)

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
           GL +  ++  A +    +      PD  TY  ++ G    G +  A  L DEM   G  P
Sbjct: 566 GLCKSGKVNDARRFFLGLSHGSFTPDNFTYCTLIHGFSAAGYVNEAFNLRDEMVNKGLVP 625

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           ++ TYN +L  +  +G   +A   +     KG  P ++TY ILI+  CK      A+++ 
Sbjct: 626 NITTYNALLNGLCKSGYLDRARRLFDKLHLKGLIPNVVTYNILIDGYCKSGSPREALDLR 685

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
             M  EG SP I+TY+SL+N  CKQ   ++A+ ++N + +  ++    T++ L+      
Sbjct: 686 GKMLKEGISPSIITYSSLINGFCKQSDVEEAMKLLNEMKASNVDQTIATFSKLVEGCIQH 745

Query: 341 GCWDAVDKILDIMNEASHSPTVFTY 365
           G    + K+ ++M+ A  S  + ++
Sbjct: 746 GDVKKMSKLHNMMHMACPSAGITSH 770


>gi|125539409|gb|EAY85804.1| hypothetical protein OsI_07165 [Oryza sativa Indica Group]
          Length = 649

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 240/489 (49%), Gaps = 44/489 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G+L DA +LI  M      PD +    +++GL    + E+A +++  M
Sbjct: 160 TYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEM 216

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +   P+ +T+   +   C+ G +  A+ LLD+M   GC PDV+ Y+T++    + G  
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 276

Query: 239 KQAIGF-------------------------WKD-------QLRKGCPPYLITYTILIEQ 266
            QA+                           W+D        +RKGC P   T+++LI  
Sbjct: 277 DQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +C+   +  A+EVL+ M   GC PD V YN ++N   ++G+ DDA+ ++N+++ +   P+
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PD 393

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           ++ +N +L        W    +++  M          T+NILI+ LC+ GLV+ A   F 
Sbjct: 394 ALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFE 453

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           QM    C PDIVTY+++L    ++G++  A+QL   +    C P + +YN ++ GL +  
Sbjct: 454 QMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAA 510

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
             E A  L  +M+     P+++T   LI   C+   V+ A+++L+++   G+      Y 
Sbjct: 511 RWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYN 570

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            +I+G  +  ++D A+++L  M     KPD   +++ +K +      ++A +L  +++  
Sbjct: 571 ALINGFSEQGRLDDALKLLSTMSC---KPDAISYNSTLKGLCRAERWQDAEELVAEMLRN 627

Query: 567 KVFEKGTTL 575
           K      T 
Sbjct: 628 KCTPNEVTF 636



 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 239/478 (50%), Gaps = 43/478 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++  C+ G+L DA +++D +              L+ G  R  R+  A +VL     
Sbjct: 94  NILIKKLCATGRLADAERVLDALKAAAAADAVSH-NTLVAGYCRDGRLADAERVLGAARA 152

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G   + +TY  ++ G C+ G++  A+ L+  M V+   PD  TYNT+L+ +    K+++
Sbjct: 153 TGAA-NVVTYTALIDGYCRSGRLDDALRLIASMPVA---PDTYTYNTVLKGLCIAKKWEE 208

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     + +R  CPP  +T+   I   C+   + RA+++LD M   GC+PD+V Y++L+N
Sbjct: 209 AEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLIN 268

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +QG  D A+ ++N +L +   PN++ YN  L  L     W+ + +++  M     SP
Sbjct: 269 GFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSP 325

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+++LI+ LC+  LVD A+    QM    C+PD V YN ++ +L + G +++AL+LL
Sbjct: 326 NEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 385

Query: 421 H-------------LLNG-------------------SSCSPCLITYNTLIDGLAKKGCM 448
           +             +L G                     C    +T+N LID L + G +
Sbjct: 386 NSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQNGLV 445

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
             A  ++ QM     +PD +T+ +L+ GF     VE A+ L + +  + +     +Y  V
Sbjct: 446 NYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIF---SYNAV 502

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           + GLC++ + + A +++  M+     P++  F+ ++  +   G+ + A ++ +++  +
Sbjct: 503 LKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNY 560



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 185/351 (52%), Gaps = 9/351 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  L+  C   +  D  +L+  M R+   P+      LI  L + + ++ A +VL+ M  
Sbjct: 296 NAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEK 355

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PDT+ YN+++  L +RG++  A+ LL+ M    C+PD + +N +L+      ++  
Sbjct: 356 YGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHD 412

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A        R  CP   +T+ ILI+ +C+   +  A +V + M    C+PDIVTY+SL+N
Sbjct: 413 ASELIAQMFRDDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLN 472

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +QG  + A+ +  ++  +   P+  +YN +L  L     W+   +++  M      P
Sbjct: 473 GFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPP 529

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+NILIN LC+ GLVDRAI    QM +    PDI TYN ++    ++G L++AL+LL
Sbjct: 530 NEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLL 589

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             +   SC P  I+YN+ + GL +    + A  L  +M+ N  +P+++T +
Sbjct: 590 STM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFK 637



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 96/408 (23%), Positives = 197/408 (48%), Gaps = 40/408 (9%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           I+ N+++  LC  G++  A   + +   +    D +++NT++     +G+   A      
Sbjct: 91  ISCNILIKKLCATGRLADA-ERVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
               G    ++TYT LI+  C+   +  A+ ++  M +   +PD  TYN+++   C   K
Sbjct: 150 ARATGA-ANVVTYTALIDGYCRSGRLDDALRLIASMPV---APDTYTYNTVLKGLCIAKK 205

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           +++A  ++  ++     PN +T+ T + S    G  D   ++LD M     +P V  Y+ 
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 368 LINGLCKYGLVDRAINSFN--------------------------------QMVSKNCQP 395
           LING  + G VD+A++  N                                +MV K C P
Sbjct: 266 LINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSP 325

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +  T++ ++ +LC+  +++ A+++L  +    C P  + YN +I+ L+++G ++ A+ L 
Sbjct: 326 NEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 385

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M+     PD +    ++ GFCRA++  +A +L+ ++ +    +    + ++I  LC++
Sbjct: 386 NSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDTLCQN 442

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             V+ A QV E M   R  PD   +S+++   ++ G+ E A +L++ +
Sbjct: 443 GLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM 490



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 163/307 (53%), Gaps = 8/307 (2%)

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           I+  ILI+++C    +A A E + D      + D V++N+LV   C+ G+  DA  V+  
Sbjct: 91  ISCNILIKKLCATGRLADA-ERVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
             + G   N +TY  L+      G    +D  L ++     +P  +TYN ++ GLC    
Sbjct: 150 ARATGAA-NVVTYTALIDGYCRSG---RLDDALRLIASMPVAPDTYTYNTVLKGLCIAKK 205

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            + A     +M+   C P+ VT+ T + + C+ G+L+ A+QLL  +    C+P ++ Y+T
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+G +++G +++A+ L   M+     P+ + +   + G C A++ E+  +L+ E+ ++G
Sbjct: 266 LINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                + + ++I  LC++  VD A++VLE M     +PD   ++ I+  +++ G  ++A 
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL 382

Query: 558 KLWQKLI 564
           +L   ++
Sbjct: 383 RLLNSMV 389



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 37/250 (14%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMV 179
           N +L+ FC   +  DAS+LI  M R +  P      N LI  L +   +  A++V + M 
Sbjct: 398 NAVLKGFCRAERWHDASELIAQMFR-DDCPLIEMTFNILIDTLCQNGLVNYATQVFEQMP 456

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
                PD +TY+ ++ G  ++G +  AI L   M    C+PD+ +YN +L+ +    +++
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWE 513

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG------------ 287
            A     + + K CPP  +T+ ILI  +C++  + RAIEVL+ M   G            
Sbjct: 514 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 573

Query: 288 --------------------CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                               C PD ++YNS +   C+  ++ DA  ++  +L     PN 
Sbjct: 574 NGFSEQGRLDDALKLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNE 633

Query: 328 ITYNTLLHSL 337
           +T+    H L
Sbjct: 634 VTFKYANHLL 643


>gi|297738205|emb|CBI27406.3| unnamed protein product [Vitis vinifera]
          Length = 821

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/439 (26%), Positives = 214/439 (48%), Gaps = 8/439 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  G +  A     +M +   +PD +    L+ GL     +E+A +    M  
Sbjct: 274 NALMSGFCKMGSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMEN 333

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TYN++  G    G I  A  ++  M ++G  PD++TY  ++      G  ++
Sbjct: 334 HGVEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEE 393

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           +    +  L +G    ++TYT+L+  +CK   I  A+ +L +M + G  PD++TY+    
Sbjct: 394 SFKLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYS---- 449

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +G  ++A+ +   + S+ + PNS   + ++  L  +G         D + ++  + 
Sbjct: 450 ----RGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAE 505

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +  YNI+I+G  K G +  A+ S+ Q++ K   P IVT+N+++   CK+G L EA++LL
Sbjct: 506 EIILYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLL 565

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P  +TY TL++G  ++G M     +  +M    I P  IT+  ++ G C+ 
Sbjct: 566 DTIKVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKE 625

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++ E+V LLK +  RG       Y  VI   CK+  +  A Q+   M+    +P    +
Sbjct: 626 GRLHESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTY 685

Query: 541 STIVKKVADDGMTEEAYKL 559
           + ++  +   G  ++A +L
Sbjct: 686 NVLINGLCVYGNLKDADRL 704



 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 129/480 (26%), Positives = 224/480 (46%), Gaps = 27/480 (5%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N +   F   G ++ A K++  M      PD      LI G  ++  IE++ 
Sbjct: 336 VEPDIVTYNILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESF 395

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN------ 226
           K+ + M+  G     +TY +++  LCK G+I  A+ LL EM V G +PD++TY+      
Sbjct: 396 KLKEKMLSQGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEE 455

Query: 227 ---------------------TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                                 I+  +F+ G   +A  ++    +      +I Y I+I+
Sbjct: 456 AIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMID 515

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
              K   I  A+     +  +G SP IVT+NSL+   CK+GK  +AV +++ +   G+ P
Sbjct: 516 GYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVP 575

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
            S+TY TL++     G   ++  +L  M   +  PT  TY +++ GLCK G +  ++   
Sbjct: 576 TSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLL 635

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
             M ++   PD +TYNTV+ + CK   L +A QL + +   S  P  +TYN LI+GL   
Sbjct: 636 KYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVLINGLCVY 695

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G ++ A  L   + +  I    + + T+I   C    V+ A+    ++ +RG ++    Y
Sbjct: 696 GNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGFEVSIRDY 755

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             VI+ LCK   +  A     +M++    PD  +   ++      G     ++++  +I+
Sbjct: 756 SAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFEIFAMMIK 815



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 199/424 (46%), Gaps = 28/424 (6%)

Query: 179 VMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           + + GVP +  T  +++ GLC++ +++ A+  L E       P V+++N ++      G 
Sbjct: 226 IKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKMGS 285

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A  F+   ++ G  P + +Y IL+  +C    +  A+E  +DM   G  PDIVTYN 
Sbjct: 286 VDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNI 345

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L N     G    A  V+  +L  G+ P+ +TY  L+      G  +   K+ + M    
Sbjct: 346 LANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQG 405

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY----------------- 400
              ++ TY +L++ LCK G +D A+   ++M     +PD++TY                 
Sbjct: 406 LKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSRGAVEEAIELYEEMCS 465

Query: 401 ----------NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
                     + ++  L ++G ++EA      +  S  +  +I YN +IDG AK G + +
Sbjct: 466 KRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMIDGYAKLGNIGE 525

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+  Y Q++E GISP  +T  +LI+GFC+  ++ EAV LL  I   G    +  Y  +++
Sbjct: 526 AVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTIKVHGLVPTSVTYTTLMN 585

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFE 570
           G C+   +     +L  M +   KP    ++ +VK +  +G   E+ +L + +    +F 
Sbjct: 586 GYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRLHESVQLLKYMYARGLFP 645

Query: 571 KGTT 574
              T
Sbjct: 646 DQIT 649



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/369 (25%), Positives = 171/369 (46%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           SRG + +A +L + M  +   P+   C  +I GL     I +A      +  S    + I
Sbjct: 449 SRGAVEEAIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEII 508

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
            YN+M+ G  K G I  A+    ++   G  P ++T+N+++      GK  +A+      
Sbjct: 509 LYNIMIDGYAKLGNIGEAVRSYKQIIEKGISPTIVTFNSLIYGFCKKGKLAEAVKLLDTI 568

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
              G  P  +TYT L+   C++  +    ++L +M  +   P  +TY  +V   CK+G+ 
Sbjct: 569 KVHGLVPTSVTYTTLMNGYCEEGDMHSMFDMLHEMEAKAIKPTQITYTVVVKGLCKEGRL 628

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            ++V ++  + +RG+ P+ ITYNT++ S           ++ + M + S  P+  TYN+L
Sbjct: 629 HESVQLLKYMYARGLFPDQITYNTVIQSFCKAHDLQKAFQLHNQMLQHSLQPSPVTYNVL 688

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           INGLC YG +  A      +  ++ +   V Y T++ A C +G +  AL   H +     
Sbjct: 689 INGLCVYGNLKDADRLLVTLQDQSIRLTKVAYTTIIKAHCAKGDVQNALVFFHQMVERGF 748

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
              +  Y+ +I+ L K+  +  A   +  M+ +GI PD      ++  F R+       +
Sbjct: 749 EVSIRDYSAVINRLCKRNLITDAKFFFCMMLTHGIPPDQDICLVMLNAFHRSGDPNSVFE 808

Query: 489 LLKEIGKRG 497
           +   + K G
Sbjct: 809 IFAMMIKCG 817



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 173/380 (45%), Gaps = 11/380 (2%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + + ++M+     +   +  A+ +L +M V   +  + TYN++L  +            +
Sbjct: 167 NNVVWDMLACAYSRAEMVHDALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWDV---Y 223

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            +    G P    T  ILI+ +C+Q  +  A+  L +   E   P +V++N+L++  CK 
Sbjct: 224 NEIKASGVPQNEYTNPILIDGLCRQSRLQDAVTFLRETGGEEFGPSVVSFNALMSGFCKM 283

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G  D A      ++  G+ P+  +YN LLH L   G  +   +  + M      P + TY
Sbjct: 284 GSVDVAKSFFCMMIKYGLLPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTY 343

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           NIL NG    GL+  A     +M+     PD+VTY  ++   C+ G + E+ +L   +  
Sbjct: 344 NILANGFRILGLISGAWKVVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLS 403

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
                 ++TY  L+  L K G +++A++L  +M   G+ PD +T+            VEE
Sbjct: 404 QGLKLSIVTYTVLLSSLCKSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEE 455

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A++L +E+  +     +     +I GL +   +  A    + +  S    +  +++ ++ 
Sbjct: 456 AIELYEEMCSKRIYPNSFVCSAIISGLFEKGAISEAQMYFDSVTKSDVAEEIILYNIMID 515

Query: 546 KVADDGMTEEAYKLWQKLIE 565
             A  G   EA + ++++IE
Sbjct: 516 GYAKLGNIGEAVRSYKQIIE 535



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 88/296 (29%), Positives = 148/296 (50%), Gaps = 15/296 (5%)

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLV-NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
           A+ VL  M +      I TYNSL+ N       +D    V N + + G+  N  T   L+
Sbjct: 187 ALFVLAKMKVLNLQVSIATYNSLLYNLRHTDIMWD----VYNEIKASGVPQNEYTNPILI 242

Query: 335 HSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
             L  +    DAV  + +   E    P+V ++N L++G CK G VD A + F  M+    
Sbjct: 243 DGLCRQSRLQDAVTFLRETGGE-EFGPSVVSFNALMSGFCKMGSVDVAKSFFCMMIKYGL 301

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD+ +YN +L  LC  G + EAL+  + +      P ++TYN L +G    G +  A  
Sbjct: 302 LPDVYSYNILLHGLCVAGSMEEALEFTNDMENHGVEPDIVTYNILANGFRILGLISGAWK 361

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +  +M+ NG++PD +T+  LI G C+   +EE+  L +++  +G K+    Y +++  LC
Sbjct: 362 VVQRMLLNGLNPDLVTYTILICGHCQMGNIEESFKLKEKMLSQGLKLSIVTYTVLLSSLC 421

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           KS ++D A+ +L  M     KPD   +S         G  EEA +L++++   +++
Sbjct: 422 KSGRIDEAVILLHEMEVIGLKPDLLTYSR--------GAVEEAIELYEEMCSKRIY 469


>gi|302760727|ref|XP_002963786.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
 gi|300169054|gb|EFJ35657.1| hypothetical protein SELMODRAFT_79843 [Selaginella moellendorffii]
          Length = 432

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 112/369 (30%), Positives = 202/369 (54%), Gaps = 5/369 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDI-MARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           +++T + ILQ  C  G++  A +  D  +   +  PD      LI GL ++ R++ A  +
Sbjct: 59  NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 118

Query: 175 LQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            + MV +GG  P+  TYN +V GLCK+ ++ +A A++ E       PDV+TYNT++  +F
Sbjct: 119 FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALF 178

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+  +A+  +     +G  P L+++  +I  +C+   +A A+EV ++M      P++V
Sbjct: 179 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 238

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY+ +++  CK  + D+A  +++ ++S G  P+ + Y  L+    + G  D+   +L  M
Sbjct: 239 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 298

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P V TY ++I+ LCK G VD A   F ++V+  C P++VTY+ ++G  C+   +
Sbjct: 299 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 358

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +E  +++  +   +C P ++TYNT+I GL+     E+A  ++ +M E G  PD  T+R L
Sbjct: 359 DEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 415

Query: 474 IWGFCRADQ 482
                  DQ
Sbjct: 416 KRALRMIDQ 424



 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 115/381 (30%), Positives = 202/381 (53%), Gaps = 5/381 (1%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           ++TYN+++ G C    + +A +LL EM V G + +  T + IL+ +   G+  QA+  + 
Sbjct: 25  SVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFD 84

Query: 247 DQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDM-AIEGCSPDIVTYNSLVNFSCK 304
             L      P +++YT LI  +CK   +  A ++   M A  GC P+  TYN+LV+  CK
Sbjct: 85  ASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCK 144

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           Q + D A  VI     R   P+ +TYNTL+ +L   G  D        M E  + PT+ +
Sbjct: 145 QDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVPTLVS 204

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           +N +I GLC+   +  A+  FN+M+ ++  P++VTY+ V+  LCK   L+EA QLL  + 
Sbjct: 205 FNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMV 264

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
              C P L+ Y  L+ G +  G ++ A+ L  +M+  G  PD +T+  +I   C+  +V+
Sbjct: 265 SEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVD 324

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +A ++ +E+           Y  +I G C++ +VD   +V+  M     +P+   ++T++
Sbjct: 325 DAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVMREMAC---RPNVVTYNTMI 381

Query: 545 KKVADDGMTEEAYKLWQKLIE 565
             ++     EEAY +++++ E
Sbjct: 382 WGLSMVDRNEEAYGMFREMSE 402



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 96/372 (25%), Positives = 174/372 (46%), Gaps = 44/372 (11%)

Query: 232 MFDNGKFKQAIGFWKD---QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG- 287
           M   G   QA+  +++   QL    P   +TY +LI   C    +  A  +L +M +EG 
Sbjct: 1   MVRAGSHNQALQLFRENPCQL----PASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGM 56

Query: 288 -----------------------------------CSPDIVTYNSLVNFSCKQGKYDDAV 312
                                                PD+V+Y +L+N  CK G+ D A 
Sbjct: 57  QCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAF 116

Query: 313 LVINNLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
            +   +++  G  PN+ TYN L+  L  +   DA   ++    +   +P V TYN L+  
Sbjct: 117 DLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAA 176

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           L + G VD A+ +F QM  +   P +V++N ++  LC+   L +AL++ + +      P 
Sbjct: 177 LFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPN 236

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           L+TY+ +IDGL K   +++A  L  +M+  G  PD + +  L+ GF  A +++ A+ LL+
Sbjct: 237 LVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLR 296

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            +  +G       Y +VI  LCK  +VD A ++   +++++  P+   +S ++       
Sbjct: 297 RMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRAS 356

Query: 552 MTEEAYKLWQKL 563
             +E  K+ +++
Sbjct: 357 RVDEGGKVMREM 368



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 75/279 (26%), Positives = 132/279 (47%), Gaps = 37/279 (13%)

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +  +S+TYN L+    +    DA   +L  M+         T +I++ GLC+ G V +A+
Sbjct: 21  LPASSVTYNVLIRGFCNASDLDAAFSLLREMDVEGMQCNDRTTSIILQGLCRCGRVAQAL 80

Query: 383 NSFNQMVS-KNCQPDIVTYNTVLGALCKEGMLNEALQLLH-LLNGSSCSPCLITYNTLID 440
             F+  +   + QPD+V+Y T++  LCK G ++ A  L   ++    C P   TYN L+D
Sbjct: 81  EHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDLFRKMVAAGGCRPNAFTYNALVD 140

Query: 441 GLAKK-----------------------------------GCMEKAMVLYGQMMENGISP 465
           GL K+                                   G +++A+  + QM E G  P
Sbjct: 141 GLCKQDRLDAARAVITEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQMTEEGYVP 200

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
             ++   +I G CRA ++ +A+++  E+  R        Y +VI GLCKS ++D A Q+L
Sbjct: 201 TLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQLDEAQQLL 260

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + M+S   +PD   ++ +V   +  G  + A  L ++++
Sbjct: 261 DRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMV 299


>gi|242081015|ref|XP_002445276.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
 gi|241941626|gb|EES14771.1| hypothetical protein SORBIDRAFT_07g007630 [Sorghum bicolor]
          Length = 768

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 121/447 (27%), Positives = 231/447 (51%), Gaps = 5/447 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARR---NQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           N +L+  C+  +  +A +L+ +MA     +  P+      +I GL +   +++A  V Q 
Sbjct: 168 NILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGLCKAQMVDRAKGVFQH 227

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G  P+  TY  ++ G    G+ +  + +L EMS  G +PD + Y  +L  +  NG+
Sbjct: 228 MIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDCVIYAVLLDYLCKNGR 287

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A   +   +RKG  P++  Y IL+     +  ++     LD M   G SPD   +N 
Sbjct: 288 CTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNI 347

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEA 356
           + N   K+   D+A+ + + +  + + P  + Y  L+ +L   G   DAV K   ++NE 
Sbjct: 348 MFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEG 407

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             +P +F ++ L+ GLC     ++A   F +++ +  + +   +N ++  LC+EG + EA
Sbjct: 408 V-TPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEA 466

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +L+ L+      P +I+YNTL+DG    G +++A  L   M+  G+ PD+ T+ TL+ G
Sbjct: 467 QRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHG 526

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +C+A ++++A  L +E+  +G       Y  ++HGL +  +   A ++   MI++R K D
Sbjct: 527 YCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLNMINNRRKCD 586

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKL 563
              ++ I+  +  +   +EA+K++Q L
Sbjct: 587 IYTYTIILNGLCRNNFVDEAFKMFQSL 613



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/406 (27%), Positives = 183/406 (45%), Gaps = 38/406 (9%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L  + + G L++    +D+M R    PD H    +     +   I++A  +   M    
Sbjct: 313 LLHGYATEGALSEMHSFLDLMVRNGVSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQW 372

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI-------------- 228
             P  + Y  ++  LCK G++  A+   ++M   G  PD+  ++++              
Sbjct: 373 LSPGVVNYGALIDALCKLGRVDDAVLKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAE 432

Query: 229 ------------LRTMFDN---------GKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
                       L   F N         G+  +A       LR    P +I+Y  L++  
Sbjct: 433 KLFFEVLDQGIRLNAAFFNILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGH 492

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C    I  A ++LD M   G  PD  TYN+L++  CK  + DDA  +   +L +G+ P  
Sbjct: 493 CLTGRIDEAAKLLDVMVSIGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGV 552

Query: 328 ITYNTLLHSLGSRGCW-DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           +TYNT+LH L   G + +A +  L+++N       ++TY I++NGLC+   VD A   F 
Sbjct: 553 VTYNTILHGLFQIGRFCEAKELYLNMINN-RRKCDIYTYTIILNGLCRNNFVDEAFKMFQ 611

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            + SK+ Q DI T N ++GAL K G   +A+ L   ++     P + TY  + + L K+G
Sbjct: 612 SLCSKDLQLDIFTINIMIGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEG 671

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLI-WGFCRADQVEEAVDLLK 491
            +E+   L+  M ENG +P+      L+ W   R D     V L K
Sbjct: 672 SLEELDELFSAMEENGTAPNSRMLNALVRWLLHRGDIGRAGVYLSK 717



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/445 (24%), Positives = 204/445 (45%), Gaps = 4/445 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L   C  G+ T+A  + D + R+   P       L+ G      + +    L +MV +G
Sbjct: 278 LLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDLMVRNG 337

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD   +N+M     K+  I  A+ + D+M      P V+ Y  ++  +   G+   A+
Sbjct: 338 VSPDHHIFNIMFNAYAKKAMIDEAMHIFDKMRQQWLSPGVVNYGALIDALCKLGRVDDAV 397

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +   + +G  P +  ++ L+  +C      +A ++  ++  +G   +   +N L+   
Sbjct: 398 LKFNQMINEGVTPDIFVFSSLVYGLCTVDKWEKAEKLFFEVLDQGIRLNAAFFNILMCNL 457

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C++G+  +A  +I+ +L   + P+ I+YNTL+      G  D   K+LD+M      P  
Sbjct: 458 CREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVSIGLKPDE 517

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL-LH 421
           FTYN L++G CK   +D A + F +M+ K   P +VTYNT+L  L + G   EA +L L+
Sbjct: 518 FTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCEAKELYLN 577

Query: 422 LLNGS-SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           ++N    C   + TY  +++GL +   +++A  ++  +    +  D  T   +I    + 
Sbjct: 578 MINNRRKCD--IYTYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIMIGALLKG 635

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            + E+A+DL   I   G       YRL+   L K   ++   ++   M  +   P+  + 
Sbjct: 636 GRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGTAPNSRML 695

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           + +V+ +   G    A     KL E
Sbjct: 696 NALVRWLLHRGDIGRAGVYLSKLDE 720



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 83/274 (30%), Positives = 141/274 (51%), Gaps = 4/274 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++ N C  G++ +A +LID+M R +  PD      L+ G     RI++A+K+L +MV 
Sbjct: 451 NILMCNLCREGRVMEAQRLIDLMLRVDVRPDVISYNTLVDGHCLTGRIDEAAKLLDVMVS 510

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD  TYN ++ G CK  +I  A +L  EM + G  P V+TYNTIL  +F  G+F +
Sbjct: 511 IGLKPDEFTYNTLLHGYCKARRIDDAYSLFREMLMKGLTPGVVTYNTILHGLFQIGRFCE 570

Query: 241 AIGFWKDQL--RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           A   + + +  R+ C  Y  TYTI++  +C+   +  A ++   +  +    DI T N +
Sbjct: 571 AKELYLNMINNRRKCDIY--TYTIILNGLCRNNFVDEAFKMFQSLCSKDLQLDIFTINIM 628

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K G+ +DA+ +   + + G+ P+  TY  +  +L   G  + +D++   M E   
Sbjct: 629 IGALLKGGRKEDAMDLFATISAYGLVPDVETYRLIAENLIKEGSLEELDELFSAMEENGT 688

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           +P     N L+  L   G + RA    +++  KN
Sbjct: 689 APNSRMLNALVRWLLHRGDIGRAGVYLSKLDEKN 722



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 133/303 (43%), Gaps = 46/303 (15%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH------SPTV 362
           DDA+ + + +L+     +  T+N LL  +    C  A + ++ + N          +P+ 
Sbjct: 33  DDALKLFDEMLTYARPASVRTFNRLLTVVSRARCSSASELVVSLFNRMIRECSVKVAPSS 92

Query: 363 FTYNILINGLCKYGLVDRAINSF------------------------------------- 385
            TY ILI   C+ G +     +F                                     
Sbjct: 93  CTYTILIGCFCRMGRLKHGFAAFGLILKTGWSLNNTVIFGQLLKGLCDAKRVDEATDILL 152

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL---NGSSCSPCLITYNTLIDGL 442
            +M    C  ++++YN +L  LC E    EAL+L+H++      S +P ++TY T+IDGL
Sbjct: 153 RRMPEFGCTLNVISYNILLKGLCNEKRAEEALELMHMMADDGDGSHTPNVVTYTTVIDGL 212

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K   +++A  ++  M++ G+ P++ T+  LI G+    + +E V +L+E+   G +   
Sbjct: 213 CKAQMVDRAKGVFQHMIDKGVRPNNHTYTCLIHGYLSTGKWKEVVQMLQEMSTHGLQPDC 272

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y +++  LCK+ +   A  + + +I    KP  T++  ++   A +G   E +     
Sbjct: 273 VIYAVLLDYLCKNGRCTEARNIFDSLIRKGIKPHVTIYGILLHGYATEGALSEMHSFLDL 332

Query: 563 LIE 565
           ++ 
Sbjct: 333 MVR 335


>gi|168055632|ref|XP_001779828.1| predicted protein [Physcomitrella patens subsp. patens]
 gi|162668740|gb|EDQ55341.1| predicted protein [Physcomitrella patens subsp. patens]
          Length = 730

 Score =  203 bits (517), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 117/467 (25%), Positives = 222/467 (47%), Gaps = 37/467 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N++L  F   G    A+++ D M  +   PD     +L+    R  ++E+A ++   M
Sbjct: 260 TYNELLSAFGRAGLCNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQM 319

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             S   P++ T+N ++G   K       + + ++M   G EPD++T+N++L     NG +
Sbjct: 320 RTSNCTPNSFTFNALIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMY 379

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA-RAIEVLDDMAIEGCSPDIVTYNS 297
            + +  ++   + G  P   T+ ILIE   + CG + +A+ + D M   GC+PD+ T+N+
Sbjct: 380 SEVLKVFRGMKKAGFEPDKATFNILIEAYGR-CGSSDQALSIYDGMLQAGCTPDLATFNT 438

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI----- 352
           L+    ++G+++ A L+++ L     +PN I Y ++LH+  + G  + + +++D      
Sbjct: 439 LLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIY 498

Query: 353 ------------------------------MNEASHSPTVFTYNILINGLCKYGLVDRAI 382
                                         M    +     T+N +I+   K G++D+A 
Sbjct: 499 VPFTKILLKTFVLVYSKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKAT 558

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           ++F  + S   +PD+VTYN ++G   +EGM  +    L     +  +P L++YNT+I   
Sbjct: 559 DTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKCEATLRECMAAGQTPDLVSYNTVIFSY 618

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
           +K G +  A  ++ +M+ NGI PD  T+ T +  +       EA+ ++K + K G K   
Sbjct: 619 SKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGCYVNGGMFPEALSVVKHMHKTGCKPDE 678

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             YR ++   CK  K +   ++L+ + SS        +  I  +V D
Sbjct: 679 VTYRTLVDAYCKIGKFEEVERILKFIKSSDPNFSKAAYRRIAARVDD 725



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 108/404 (26%), Positives = 201/404 (49%), Gaps = 4/404 (0%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           +++++GL R  +  KA +V   M  S    PD +T  +M+  L +  Q+ +   L   + 
Sbjct: 50  LSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLR 109

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC-GI 273
             G   DV  Y +++  +  N KFK+A+GF++     G  P L+TY ++I+   K+    
Sbjct: 110 EEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSW 169

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY-DDAVLVINNLLSRGMEPNSITYNT 332
              +E+ ++M  +G  PD  TYN+ +  +C  G   ++A  +   + S    P+ +TYN 
Sbjct: 170 ENILELFEEMKAQGIQPDEYTYNTAIT-ACASGSLCEEATELFTQMKSSNCTPDRVTYNA 228

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           LL   G  G ++    +L  M  A   P + TYN L++   + GL + A    + MVSK 
Sbjct: 229 LLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKG 288

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
            +PD+ TY ++L A  + G + +A+++ + +  S+C+P   T+N LI    K     + M
Sbjct: 289 IEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMM 348

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           V++  M   G+ PD +T  +L+  F +     E + + + + K G +   + + ++I   
Sbjct: 349 VIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAY 408

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
            +    D A+ + + M+ +   PD   F+T++  +A +G  E A
Sbjct: 409 GRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHA 452



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 204/435 (46%), Gaps = 1/435 (0%)

Query: 119 TNNKILQNFCSRGK-LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N I+  +  +G+   +  +L + M  +   PD +     I         E+A+++   
Sbjct: 154 TYNVIIDLYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQ 213

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  S   PD +TYN ++    K G    A  +L EM  +GC P+++TYN +L      G 
Sbjct: 214 MKSSNCTPDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGL 273

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A       + KG  P + TYT L+    +   + +A+E+ + M    C+P+  T+N+
Sbjct: 274 CNAAAEMKDSMVSKGIEPDVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNA 333

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+    K   + + +++  ++ + G+EP+ +T+N+LL + G  G +  V K+   M +A 
Sbjct: 334 LIGMHGKNKNFSEMMVIFEDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAG 393

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   T+NILI    + G  D+A++ ++ M+   C PD+ T+NT+L AL +EG    A 
Sbjct: 394 FEPDKATFNILIEAYGRCGSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAE 453

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L  LN SS  P  I Y +++   A  G +EK   +   +    +    I  +T +  +
Sbjct: 454 LILDELNRSSYKPNDIAYASMLHAYANGGELEKLKEMVDTLHTIYVPFTKILLKTFVLVY 513

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +   V+EA D    +   G     S +  +I    K   +D A     L+ S+  +PD 
Sbjct: 514 SKCSLVDEAEDAFLAMRHHGYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDV 573

Query: 538 TVFSTIVKKVADDGM 552
             ++ ++     +GM
Sbjct: 574 VTYNCLMGMYGREGM 588



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 106/435 (24%), Positives = 207/435 (47%), Gaps = 2/435 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARR-NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           I++     G+   A ++ + M +  N  PD      ++R L R  ++   S++ + +   
Sbjct: 52  IMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTTVSRLFKSLREE 111

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK-FKQ 240
           G   D   Y  ++  L +  + + A+   ++M  +G +P ++TYN I+      G+ ++ 
Sbjct: 112 GYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIIDLYGKKGRSWEN 171

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            +  +++   +G  P   TY   I           A E+   M    C+PD VTYN+L++
Sbjct: 172 ILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCTPDRVTYNALLD 231

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G Y++A  V+  + S G  PN +TYN LL + G  G  +A  ++ D M      P
Sbjct: 232 VYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEMKDSMVSKGIEP 291

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            VFTY  L++   + G V++A+  +NQM + NC P+  T+N ++G   K    +E + + 
Sbjct: 292 DVFTYTSLLSAYSRAGKVEQAMEIYNQMRTSNCTPNSFTFNALIGMHGKNKNFSEMMVIF 351

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++T+N+L+    K G   + + ++  M + G  PD  T   LI  + R 
Sbjct: 352 EDMQACGVEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRC 411

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
              ++A+ +   + + G     + +  ++  L +  + + A  +L+ +  S YKP+D  +
Sbjct: 412 GSSDQALSIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAY 471

Query: 541 STIVKKVADDGMTEE 555
           ++++   A+ G  E+
Sbjct: 472 ASMLHAYANGGELEK 486



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 99/344 (28%), Positives = 159/344 (46%), Gaps = 12/344 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N +L  F   G  ++  K+   M +    PD      LI    R    ++A 
Sbjct: 359 VEPDIVTWNSLLGAFGKNGMYSEVLKVFRGMKKAGFEPDKATFNILIEAYGRCGSSDQAL 418

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M+ +G  PD  T+N ++  L + G+   A  +LDE++ S  +P+ I Y ++L   
Sbjct: 419 SIYDGMLQAGCTPDLATFNTLLAALAREGRWEHAELILDELNRSSYKPNDIAYASMLHAY 478

Query: 233 FDNG---KFKQAIGFWKDQLRKGCPPY---LITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            + G   K K+ +    D L     P+   L+   +L+   C    +  A +    M   
Sbjct: 479 ANGGELEKLKEMV----DTLHTIYVPFTKILLKTFVLVYSKCSL--VDEAEDAFLAMRHH 532

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G   D  T+N++++   K+G  D A      L S G+EP+ +TYN L+   G  G +   
Sbjct: 533 GYLSDTSTFNAMISMYGKKGMMDKATDTFALLRSTGLEPDVVTYNCLMGMYGREGMYRKC 592

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
           +  L     A  +P + +YN +I    K+G +  A   F++MVS   QPD  TYNT +G 
Sbjct: 593 EATLRECMAAGQTPDLVSYNTVIFSYSKHGQLSSATRIFHEMVSNGIQPDSFTYNTFVGC 652

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
               GM  EAL ++  ++ + C P  +TY TL+D   K G  E+
Sbjct: 653 YVNGGMFPEALSVVKHMHKTGCKPDEVTYRTLVDAYCKIGKFEE 696



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 54/245 (22%), Positives = 104/245 (42%), Gaps = 4/245 (1%)

Query: 324 EPN--SITYNTLLHSLGSRGCWDAVDKILDIMNEA-SHSPTVFTYNILINGLCKYGLVDR 380
           EPN  S    +++  LG  G W+   ++ + M ++ +  P   T  +++  L +   +  
Sbjct: 41  EPNLSSSELLSIMKGLGREGQWNKALEVFNWMRQSVNFRPDGVTIAVMLRILGRESQLTT 100

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
               F  +  +    D+  Y +++ AL +     EAL     +  +   P L+TYN +ID
Sbjct: 101 VSRLFKSLREEGYPLDVYAYTSLISALSRNRKFKEALGFFEQMKEAGPQPSLVTYNVIID 160

Query: 441 GLAKKG-CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
              KKG   E  + L+ +M   GI PD+ T+ T I         EEA +L  ++      
Sbjct: 161 LYGKKGRSWENILELFEEMKAQGIQPDEYTYNTAITACASGSLCEEATELFTQMKSSNCT 220

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  ++    K+   + A  VL+ M S+   P+   ++ ++      G+   A ++
Sbjct: 221 PDRVTYNALLDVYGKAGWYNEAANVLKEMESAGCLPNIVTYNELLSAFGRAGLCNAAAEM 280

Query: 560 WQKLI 564
              ++
Sbjct: 281 KDSMV 285


>gi|15225722|ref|NP_180822.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75160493|sp|Q8S8P6.1|PP180_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g32630
 gi|20197234|gb|AAM14987.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330253613|gb|AEC08707.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 624

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 126/457 (27%), Positives = 215/457 (47%), Gaps = 35/457 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           + + +   G   +  ++ D M ++    D   CI  +    +  RI+   ++ + MV SG
Sbjct: 160 VFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSG 219

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
                 +  ++V GLC+RG++  +  L+ E SV G +P+  TYNTI+        F    
Sbjct: 220 VKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVE 279

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G  K   + G     +TYT+L+E   K   ++ A ++ D+M   G   D+  Y SL++++
Sbjct: 280 GVLKVMKKDGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWN 339

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C++G    A L+ + L  +G+ P+S TY  L+  +   G   A + +++ M     + T 
Sbjct: 340 CRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEMGAAEILMNEMQSKGVNITQ 399

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV------------------- 403
             +N LI+G C+ G+VD A   ++ M  K  Q D+ T NT+                   
Sbjct: 400 VVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFR 459

Query: 404 ----------------LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
                           +   CKEG + EA +L   ++     P  ITYN +I    K+G 
Sbjct: 460 MMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGK 519

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +++A  L   M  NG+ PD  T+ +LI G C AD V+EA+ L  E+G +G    +  Y +
Sbjct: 520 IKEARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTV 579

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +I GL K+ K D A  + + M    Y  D+ V++ ++
Sbjct: 580 MISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALI 616



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 79/299 (26%), Positives = 145/299 (48%), Gaps = 8/299 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E+D      ++   C +G +  A  L D +  +   P  +    LI G+ ++  +  A+
Sbjct: 325 IESDVHVYTSLISWNCRKGNMKRAFLLFDELTEKGLSPSSYTYGALIDGVCKVGEM-GAA 383

Query: 173 KVLQIMVMSGGVPDT-ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           ++L   + S GV  T + +N ++ G C++G +  A  + D M   G + DV T NTI   
Sbjct: 384 EILMNEMQSKGVNITQVVFNTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASC 443

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
                ++ +A  +    +  G     ++YT LI+  CK+  +  A  +  +M+ +G  P+
Sbjct: 444 FNRLKRYDEAKQWLFRMMEGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPN 503

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            +TYN ++   CKQGK  +A  +  N+ + GM+P+S TY +L+H        D VD+ + 
Sbjct: 504 AITYNVMIYAYCKQGKIKEARKLRANMEANGMDPDSYTYTSLIH---GECIADNVDEAMR 560

Query: 352 IMNE---ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           + +E           TY ++I+GL K G  D A   +++M  K    D   Y  ++G++
Sbjct: 561 LFSEMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSM 619



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 2/220 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C +G + +AS + D+M ++    D   C  +     R+ R ++A + L  M M
Sbjct: 403 NTLIDGYCRKGMVDEASMIYDVMEQKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM-M 461

Query: 181 SGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            GGV   T++Y  ++   CK G +  A  L  EMS  G +P+ ITYN ++      GK K
Sbjct: 462 EGGVKLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKGVQPNAITYNVMIYAYCKQGKIK 521

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A     +    G  P   TYT LI   C    +  A+ +  +M ++G   + VTY  ++
Sbjct: 522 EARKLRANMEANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 581

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           +   K GK D+A  + + +  +G   ++  Y  L+ S+ S
Sbjct: 582 SGLSKAGKSDEAFGLYDEMKRKGYTIDNKVYTALIGSMHS 621



 Score = 50.4 bits (119), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 40/190 (21%), Positives = 84/190 (44%)

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G+ +  +  F+ MV K    D  +    L A  K   ++  L++   +  S     + + 
Sbjct: 168 GMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEIFRRMVDSGVKITVYSL 227

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
             +++GL ++G +EK+  L  +    GI P+  T+ T+I  + +         +LK + K
Sbjct: 228 TIVVEGLCRRGEVEKSKKLIKEFSVKGIKPEAYTYNTIINAYVKQRDFSGVEGVLKVMKK 287

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G       Y L++    K+ K+  A ++ + M     + D  V+++++      G  + 
Sbjct: 288 DGVVYNKVTYTLLMELSVKNGKMSDAEKLFDEMRERGIESDVHVYTSLISWNCRKGNMKR 347

Query: 556 AYKLWQKLIE 565
           A+ L+ +L E
Sbjct: 348 AFLLFDELTE 357


>gi|356577604|ref|XP_003556914.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At2g32630-like [Glycine max]
          Length = 619

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 131/449 (29%), Positives = 215/449 (47%), Gaps = 47/449 (10%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI-TYNMM 193
           DA K+ D +  +  + +   C        + +++E   +  + MV SG V   + +  ++
Sbjct: 134 DALKVFDYVMEKGLVVEGRSCFXK-----KCNKVELCVRFFRRMVESGRVDIGVQSLTIV 188

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF---DNGKFKQAIGFWKDQLR 250
           V  LC+RG++  A  L++EM+  G  P V TYNT+L       D     + +G  +   R
Sbjct: 189 VDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILGLME---R 245

Query: 251 KGCPPYLITYTILIEQV-----------------------------------CKQCGIAR 275
           +G    L+TYTILIE                                     C+   + R
Sbjct: 246 EGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRR 305

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A  + D+M   G  P+  T+ +L++  CK G+ + A +++  +  +G++ N + +NT++ 
Sbjct: 306 ASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMD 365

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               RG  D   ++ DIM        VFTYNIL +GLCK    + A    N MV K   P
Sbjct: 366 GYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAP 425

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           ++VT  T +   C+EG L E  + L  +      P ++TYNTLID  +K   +++A  L 
Sbjct: 426 NVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLK 485

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M+E G+ PD  T+ +LI G C  D+V+EA+ L  E+  +G +     Y  +I GL K 
Sbjct: 486 AEMVEKGLLPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKE 545

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            + D A+++ + M+     PDD VF  +V
Sbjct: 546 GRADEALKLYDEMMRMGLIPDDRVFEALV 574



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 95/326 (29%), Positives = 159/326 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++ + S  ++ +A K+ + M  RN   D +   ++I    R   + +AS +   M
Sbjct: 254 TYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAGNVRRASALFDEM 313

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G VP+T T+  ++ G+CK GQ+ +A  LL+EM   G + +V+ +NT++      G  
Sbjct: 314 ICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFNTMMDGYCKRGMM 373

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A        RKG    + TY IL   +CK      A  VL+ M  +G +P++VT  + 
Sbjct: 374 DEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEKGVAPNVVTCATF 433

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C++G   +    + N+  RG+ PN +TYNTL+ +            +   M E   
Sbjct: 434 IEIYCQEGNLAEPERFLRNIEKRGVVPNIVTYNTLIDAYSKNEKVKQAHXLKAEMVEKGL 493

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P VFTY  LI+G C    VD A+  FN+M+ K  + ++ TY  ++  L KEG  +EAL+
Sbjct: 494 LPDVFTYTSLIHGECIVDKVDEALKLFNEMLVKGIRGNVKTYTAIISGLSKEGRADEALK 553

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAK 444
           L   +      P    +  L+  L K
Sbjct: 554 LYDEMMRMGLIPDDRVFEALVGSLHK 579



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 142/300 (47%), Gaps = 6/300 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D      ++   C  G +  AS L D M  R  +P+      LI G+ +  ++E A 
Sbjct: 283 VEMDVYVYTSMISWNCRAGNVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAE 342

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ M   G   + + +N M+ G CKRG +  A  L D M   G E DV TYN +   +
Sbjct: 343 ILLEEMQCKGVDLNVVIFNTMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGL 402

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               ++++A       + KG  P ++T    IE  C++  +A     L ++   G  P+I
Sbjct: 403 CKLHRYEEAKRVLNVMVEKGVAPNVVTCATFIEIYCQEGNLAEPERFLRNIEKRGVVPNI 462

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L++   K  K   A  +   ++ +G+ P+  TY +L+H        D VD+ L +
Sbjct: 463 VTYNTLIDAYSKNEKVKQAHXLKAEMVEKGLLPDVFTYTSLIH---GECIVDKVDEALKL 519

Query: 353 MNE---ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            NE         V TY  +I+GL K G  D A+  +++M+     PD   +  ++G+L K
Sbjct: 520 FNEMLVKGIRGNVKTYTAIISGLSKEGRADEALKLYDEMMRMGLIPDDRVFEALVGSLHK 579



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 35/242 (14%)

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V +  I+++ LC+ G V RA    N+M ++   P + TYNT+L A           ++L 
Sbjct: 182 VQSLTIVVDVLCRRGEVGRAKELMNEMAARGVVPTVFTYNTLLNACVVRKDREGVDEILG 241

Query: 422 LLNGSSCSPCLITYNTLID--------GLAKK---------------------------G 446
           L+        L+TY  LI+        G A+K                           G
Sbjct: 242 LMEREGVVASLVTYTILIEWYASSERIGEAEKVYEEMCERNVEMDVYVYTSMISWNCRAG 301

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            + +A  L+ +M+  GI P+  T   LI G C+A Q+E A  LL+E+  +G  +    + 
Sbjct: 302 NVRRASALFDEMICRGIVPNTXTFGALISGVCKAGQMEAAEILLEEMQCKGVDLNVVIFN 361

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            ++ G CK   +D A ++ ++M    ++ D   ++ +   +      EEA ++   ++E 
Sbjct: 362 TMMDGYCKRGMMDEAFRLQDIMERKGFEADVFTYNILASGLCKLHRYEEAKRVLNVMVEK 421

Query: 567 KV 568
            V
Sbjct: 422 GV 423


>gi|449485308|ref|XP_004157129.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At4g31850, chloroplastic-like [Cucumis sativus]
          Length = 1113

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 127/454 (27%), Positives = 219/454 (48%), Gaps = 39/454 (8%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           K ++ +  R  +  F  CI   R L R  +I++A ++ + M   G  PD +TY +++  L
Sbjct: 251 KEMEDLGLRPNVYTFTICI---RVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDAL 307

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C  GQ+ +A  L  +M  +G +PD + Y T+L    D G       FW      G  P +
Sbjct: 308 CNAGQLENAKELFVKMKANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDV 367

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +T+TIL++ +CK      A    D M  +G  P++ TYN+L+    + G+ +DA+ +++ 
Sbjct: 368 VTFTILVDVLCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDT 427

Query: 318 LLSRGMEPNSITY-----------------------------------NTLLHSLGSRGC 342
           + S G++P + TY                                   N  L+SL   G 
Sbjct: 428 MESVGVQPTAYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGR 487

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                 + + + E   +P   TYN+++    K G VD A+N  ++M+   C+PD++  N+
Sbjct: 488 LREAKTMFNGLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNS 547

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++ +L K G ++EA Q+   +     SP ++TYNTL+ GL K+G ++KA+ L+  M+   
Sbjct: 548 LIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKK 607

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
            SP+ I+  TL+  FC+ D+VE A+ +  ++     K     Y  VI+GL K  KV+ A 
Sbjct: 608 CSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAF 667

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                +  S + PD     T++  +   G   +A
Sbjct: 668 WFFHQLKKSMH-PDHVTICTLLPGLVKCGQIGDA 700



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 217/445 (48%), Gaps = 8/445 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L  F   G L    +    M     +PD      L+  L +    ++A     +M   G
Sbjct: 338 LLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDVMRKQG 397

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +P+  TYN ++ GL + G+I  A+ LLD M   G +P   TY T +     +G+  +A+
Sbjct: 398 ILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGETGKAV 457

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             ++    KG  P ++     +  + +   +  A  + + +   G +PD VTYN ++   
Sbjct: 458 ETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNMMMKCY 517

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K G+ D+AV +++ ++  G EP+ I  N+L+ SL   G  D   ++ D M +   SPTV
Sbjct: 518 SKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTV 577

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN L++GL K G V +AI  F  M+ K C P+ +++NT+L   CK   +  AL++   
Sbjct: 578 VTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSK 637

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +    C P ++TYNT+I GL K+  +  A   + Q ++  + PD +T  TL+ G  +  Q
Sbjct: 638 MTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQ-LKKSMHPDHVTICTLLPGLVKCGQ 696

Query: 483 VEEAV----DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           + +A+    D + ++  R N+   S +  ++ G     ++D AI   E ++ +    +D+
Sbjct: 697 IGDAISIARDFMYQVRFRVNR---SFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDS 753

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
               +V+ +        AY+++ K 
Sbjct: 754 FLIPLVRVLCKHKRELYAYQIFDKF 778



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 130/486 (26%), Positives = 220/486 (45%), Gaps = 35/486 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T   I +    RG L   + +++ M +   + + +    LI  LI+     +A 
Sbjct: 153 IRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQSGFCGEAL 212

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V + MV  G  P   TY+ ++  L K+      + LL EM   G  P+V T+   +R +
Sbjct: 213 EVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYTFTICIRVL 272

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL------------ 280
              GK  +A   ++    +GC P L+TYT+LI+ +C    +  A E+             
Sbjct: 273 GRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMKANGHKPDQ 332

Query: 281 -----------------------DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                    M  +G  PD+VT+  LV+  CK   +D+A    + 
Sbjct: 333 VIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFDEAFATFDV 392

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +  +G+ PN  TYNTL+  L   G  +   K+LD M      PT +TY   I+   K G 
Sbjct: 393 MRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFIDYFGKSGE 452

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
             +A+ +F +M +K   P+IV  N  L +L + G L EA  + + L  +  +P  +TYN 
Sbjct: 453 TGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPDSVTYNM 512

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           ++   +K G +++A+ L  +M+ NG  PD I   +LI    +A +V+EA  +   +    
Sbjct: 513 MMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMK 572

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y  ++ GL K  +V  AI++ E MI  +  P+   F+T++     +   E A 
Sbjct: 573 LSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKNDEVELAL 632

Query: 558 KLWQKL 563
           K++ K+
Sbjct: 633 KMFSKM 638



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 128/523 (24%), Positives = 237/523 (45%), Gaps = 38/523 (7%)

Query: 80  SESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKL 139
           SE  VL V   L+ +T   ++       S+ P V +  +T N +L+      K+ D + +
Sbjct: 88  SEDEVLGV---LKSMTDPIRALSYFYSISEFPTVLHTTETCNFMLEFLRVHDKVEDMAAV 144

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK 199
            + M ++    D    + + + L     + + + VL  M  +G V +  +YN ++  L +
Sbjct: 145 FEFMQKKIIRRDLDTYLTIFKALSIRGGLRQMTTVLNKMRKAGFVLNAYSYNGLIHLLIQ 204

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
            G    A+ +   M   G +P + TY+ ++  +      +  +   K+    G  P + T
Sbjct: 205 SGFCGEALEVYRRMVSEGLKPSLKTYSALMVALGKKRDSEMVMVLLKEMEDLGLRPNVYT 264

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           +TI I  + +   I  A E+   M  EGC PD+VTY  L++  C  G+ ++A  +   + 
Sbjct: 265 FTICIRVLGRAGKIDEAYEIFRRMDDEGCGPDLVTYTVLIDALCNAGQLENAKELFVKMK 324

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           + G +P+ + Y TLL      G  D   +    M    + P V T+ IL++ LCK    D
Sbjct: 325 ANGHKPDQVIYITLLDKFNDFGDLDTFKEFWSQMEADGYMPDVVTFTILVDVLCKARDFD 384

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A  +F+ M  +   P++ TYNT++  L + G + +AL+LL  +      P   TY T I
Sbjct: 385 EAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPTAYTYITFI 444

Query: 440 D-----------------------------------GLAKKGCMEKAMVLYGQMMENGIS 464
           D                                    LA+ G + +A  ++  + ENG++
Sbjct: 445 DYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLA 504

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD +T+  ++  + +  QV+EAV+LL E+ + G +        +I  L K+ +VD A Q+
Sbjct: 505 PDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQM 564

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
            + M   +  P    ++T++  +  +G  ++A +L++ +I  K
Sbjct: 565 FDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKK 607



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 128/512 (25%), Positives = 216/512 (42%), Gaps = 77/512 (15%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C      +A    D+M ++  +P+ H    LI GL+R  RIE A K+L  M   G  P 
Sbjct: 377 LCKARDFDEAFATFDVMRKQGILPNLHTYNTLICGLLRAGRIEDALKLLDTMESVGVQPT 436

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY   +    K G+   A+   ++M   G  P+++  N  L ++ + G+ ++A   + 
Sbjct: 437 AYTYITFIDYFGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFN 496

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
                G  P  +TY ++++   K   +  A+ +L +M   GC PD++  NSL++   K G
Sbjct: 497 GLRENGLAPDSVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAG 556

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           + D+A  + + +    + P  +TYNTLL  LG  G      ++ + M     SP   ++N
Sbjct: 557 RVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFN 616

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L++  CK   V+ A+  F++M   +C+PD++TYNTV+  L KE  +N A    H L   
Sbjct: 617 TLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLK-K 675

Query: 427 SCSPCLITYNTLIDGLAKKGC------------------------------------MEK 450
           S  P  +T  TL+ GL K G                                     M+K
Sbjct: 676 SMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDK 735

Query: 451 AMVLYGQMMENGI------------------------------------SPDDITHRTLI 474
           A++   +++ NGI                                    SP   ++  LI
Sbjct: 736 AIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLI 795

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR--LVIHGLCKSKKVDMAIQVLELMISSR 532
                    E+A DL K++   G       +   L +HG  KS K+    ++ + MIS R
Sbjct: 796 GELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHG--KSGKITELFELYKEMISRR 853

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            KPD   ++ ++  +A     ++A   +  L+
Sbjct: 854 CKPDAITYNIVISSLAKSNNLDKALDFFYDLV 885



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 127/491 (25%), Positives = 220/491 (44%), Gaps = 46/491 (9%)

Query: 114  ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
            E D    N ++ +    G++ +A ++ D M      P       L+ GL +  R++KA +
Sbjct: 539  EPDVIVVNSLIDSLYKAGRVDEAWQMFDRMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIE 598

Query: 174  VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            + + M+     P+TI++N ++   CK  ++  A+ +  +M+V  C+PDV+TYNT++  + 
Sbjct: 599  LFESMIXKKCSPNTISFNTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLI 658

Query: 234  DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV--CKQCG----IAR------------ 275
               K   A  F+  QL+K   P  +T   L+  +  C Q G    IAR            
Sbjct: 659  KENKVNHAFWFFH-QLKKSMHPDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNR 717

Query: 276  ------------------AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                              AI   +++ + G   +      LV   CK  +   A  + + 
Sbjct: 718  SFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDK 777

Query: 318  LLSR-GMEPNSITYNTLLHSL----GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
               + G+ P   +YN L+  L     +   WD    +   M     +P  FT+N+L+   
Sbjct: 778  FTKKLGISPTLASYNCLIGELLEVHYTEKAWD----LFKDMKNVGCAPDAFTFNMLLAVH 833

Query: 373  CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
             K G +      + +M+S+ C+PD +TYN V+ +L K   L++AL   + L  S   P  
Sbjct: 834  GKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFFYDLVSSDFRPTP 893

Query: 433  ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
             TY  LIDGLAK G +E+AM L+ +M + G  P+      LI G+ +    E A  L K 
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 493  IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
            +   G +    +Y +++  LC + +VD A+     + S+   PD   ++ I+  +     
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 553  TEEAYKLWQKL 563
             EEA  L+ ++
Sbjct: 1014 MEEALALYNEM 1024



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 126/478 (26%), Positives = 212/478 (44%), Gaps = 40/478 (8%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           F   G+   A +  + M  +  +P+   C   +  L  + R+ +A  +   +  +G  PD
Sbjct: 447 FGKSGETGKAVETFEKMKAKGIVPNIVACNASLYSLAEMGRLREAKTMFNGLRENGLAPD 506

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI----------------------- 223
           ++TYNMM+    K GQ+  A+ LL EM  +GCEPDVI                       
Sbjct: 507 SVTYNMMMKCYSKVGQVDEAVNLLSEMIRNGCEPDVIVVNSLIDSLYKAGRVDEAWQMFD 566

Query: 224 ------------TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
                       TYNT+L  +   G+ ++AI  ++  + K C P  I++  L++  CK  
Sbjct: 567 RMKDMKLSPTVVTYNTLLSGLGKEGRVQKAIELFESMIXKKCSPNTISFNTLLDCFCKND 626

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            +  A+++   M +  C PD++TYN+++    K+ K + A    + L  + M P+ +T  
Sbjct: 627 EVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQL-KKSMHPDHVTIC 685

Query: 332 TLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           TLL  L   G   DA+    D M +         +  L+ G      +D+AI    ++V 
Sbjct: 686 TLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVL 745

Query: 391 KN-CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS-SCSPCLITYNTLIDGLAKKGCM 448
              C+ D      V   LCK      A Q+          SP L +YN LI  L +    
Sbjct: 746 NGICREDSFLIPLV-RVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYT 804

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           EKA  L+  M   G +PD  T   L+    ++ ++ E  +L KE+  R  K     Y +V
Sbjct: 805 EKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIV 864

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           I  L KS  +D A+     ++SS ++P    +  ++  +A  G  EEA +L++++ ++
Sbjct: 865 ISSLAKSNNLDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDY 922



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 95/341 (27%), Positives = 162/341 (47%), Gaps = 1/341 (0%)

Query: 154  FCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDE 212
            F I L+R L +  R   A ++        G+ P   +YN ++G L +      A  L  +
Sbjct: 754  FLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKD 813

Query: 213  MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
            M   GC PD  T+N +L     +GK  +    +K+ + + C P  ITY I+I  + K   
Sbjct: 814  MKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNN 873

Query: 273  IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
            + +A++   D+      P   TY  L++   K G+ ++A+ +   +   G +PN   +N 
Sbjct: 874  LDKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNI 933

Query: 333  LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
            L++  G  G  +   ++   M      P + +Y IL++ LC  G VD A+  FN++ S  
Sbjct: 934  LINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTG 993

Query: 393  CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
              PD + YN ++  L K   + EAL L + +      P L TYN+L+  L   G +E+A 
Sbjct: 994  LDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAK 1053

Query: 453  VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
             +Y ++   G+ PD  T+  LI G+  ++  E A  + K +
Sbjct: 1054 RMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNM 1094



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 109/415 (26%), Positives = 193/415 (46%), Gaps = 2/415 (0%)

Query: 131  GKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
            G++ DA  +  D M +     +  F  +L+ G +    ++KA    + +V++G   +   
Sbjct: 695  GQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMDKAIIFAEELVLNGICREDSF 754

Query: 190  YNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
               +V  LCK  +   A  + D+ +   G  P + +YN ++  + +    ++A   +KD 
Sbjct: 755  LIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCLIGELLEVHYTEKAWDLFKDM 814

Query: 249  LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
               GC P   T+ +L+    K   I    E+  +M    C PD +TYN +++   K    
Sbjct: 815  KNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNL 874

Query: 309  DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            D A+    +L+S    P   TY  L+  L   G  +   ++ + M++    P    +NIL
Sbjct: 875  DKALDFFYDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNIL 934

Query: 369  INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
            ING  K G  + A   F +MV++  +PD+ +Y  ++  LC  G ++EAL   + L  +  
Sbjct: 935  INGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGL 994

Query: 429  SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
             P  I YN +I+GL K   ME+A+ LY +M   GI PD  T+ +L+     A  VE+A  
Sbjct: 995  DPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKR 1054

Query: 489  LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            + +E+   G +     Y  +I G   S+  + A  V + M+     P+   ++ +
Sbjct: 1055 MYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 217/482 (45%), Gaps = 40/482 (8%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N +L  FC   ++  A K+   M   +  PD      +I GLI+ +++  A      +  
Sbjct: 616  NTLLDCFCKNDEVELALKMFSKMTVMDCKPDVLTYNTVIYGLIKENKVNHAFWFFHQLKK 675

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALL-----------------DEMSVSGCEPDVI 223
            S   PD +T   ++ GL K GQI  AI++                  D M  +  E ++ 
Sbjct: 676  SMH-PDHVTICTLLPGLVKCGQIGDAISIARDFMYQVRFRVNRSFWEDLMGGTLVEAEMD 734

Query: 224  TYNTILRTMFDNG----------------KFKQAIGFWK--DQLRK--GCPPYLITYTIL 263
                    +  NG                K K+ +  ++  D+  K  G  P L +Y  L
Sbjct: 735  KAIIFAEELVLNGICREDSFLIPLVRVLCKHKRELYAYQIFDKFTKKLGISPTLASYNCL 794

Query: 264  IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
            I ++ +     +A ++  DM   GC+PD  T+N L+    K GK  +   +   ++SR  
Sbjct: 795  IGELLEVHYTEKAWDLFKDMKNVGCAPDAFTFNMLLAVHGKSGKITELFELYKEMISRRC 854

Query: 324  EPNSITYNTLLHSLGSRGCWD-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +P++ITYN ++ SL      D A+D   D+++ +   PT  TY  LI+GL K G ++ A+
Sbjct: 855  KPDAITYNIVISSLAKSNNLDKALDFFYDLVS-SDFRPTPRTYGPLIDGLAKVGRLEEAM 913

Query: 383  NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
              F +M    C+P+   +N ++    K G    A QL   +      P L +Y  L+D L
Sbjct: 914  RLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCL 973

Query: 443  AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
               G +++A+  + ++   G+ PD I +  +I G  ++ ++EEA+ L  E+  RG     
Sbjct: 974  CLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDL 1033

Query: 503  SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
              Y  ++  L  +  V+ A ++ E +  +  +PD   ++ +++  +     E AY +++ 
Sbjct: 1034 YTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKN 1093

Query: 563  LI 564
            ++
Sbjct: 1094 MM 1095



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 82/285 (28%), Positives = 140/285 (49%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T N +L      GK+T+  +L   M  R   PD      +I  L + + ++KA    
Sbjct: 822  DAFTFNMLLAVHGKSGKITELFELYKEMISRRCKPDAITYNIVISSLAKSNNLDKALDFF 881

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              +V S   P   TY  ++ GL K G++  A+ L +EMS  GC+P+   +N ++      
Sbjct: 882  YDLVSSDFRPTPRTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKI 941

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            G  + A   +K  + +G  P L +YTIL++ +C    +  A+   +++   G  PD + Y
Sbjct: 942  GDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAY 1001

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            N ++N   K  + ++A+ + N + +RG+ P+  TYN+L+ +LG  G  +   ++ + +  
Sbjct: 1002 NRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQL 1061

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
            A   P VFTYN LI G       + A   +  M+   C P+I TY
Sbjct: 1062 AGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTY 1106



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/216 (25%), Positives = 104/216 (48%)

Query: 118  KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
            +T   ++      G+L +A +L + M+     P+      LI G  +I   E A ++ + 
Sbjct: 894  RTYGPLIDGLAKVGRLEEAMRLFEEMSDYGCKPNCAIFNILINGYGKIGDTETACQLFKR 953

Query: 178  MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            MV  G  PD  +Y ++V  LC  G++  A+   +E+  +G +PD I YN I+  +  + +
Sbjct: 954  MVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQR 1013

Query: 238  FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             ++A+  + +   +G  P L TY  L+  +     + +A  + +++ + G  PD+ TYN+
Sbjct: 1014 MEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNA 1073

Query: 298  LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            L+         + A  V  N++  G  PN  TY  L
Sbjct: 1074 LIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQL 1109



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 52/182 (28%), Positives = 83/182 (45%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++  +   G    A +L   M      PD      L+  L    R+++A      +  
Sbjct: 932  NILINGYGKIGDTETACQLFKRMVNEGIRPDLKSYTILVDCLCLAGRVDEALYYFNELKS 991

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            +G  PD I YN ++ GL K  ++  A+AL +EM   G  PD+ TYN+++  +   G  +Q
Sbjct: 992  TGLDPDFIAYNRIINGLGKSQRMEEALALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQ 1051

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A   +++    G  P + TY  LI           A  V  +M ++GC+P+I TY  L N
Sbjct: 1052 AKRMYEELQLAGLEPDVFTYNALIRGYSLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPN 1111

Query: 301  FS 302
             S
Sbjct: 1112 QS 1113



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 44/154 (28%), Positives = 74/154 (48%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            +  D K+   ++   C  G++ +A    + +      PDF     +I GL +  R+E+A 
Sbjct: 959  IRPDLKSYTILVDCLCLAGRVDEALYYFNELKSTGLDPDFIAYNRIINGLGKSQRMEEAL 1018

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             +   M   G VPD  TYN ++  L   G +  A  + +E+ ++G EPDV TYN ++R  
Sbjct: 1019 ALYNEMRNRGIVPDLYTYNSLMLNLGLAGMVEQAKRMYEELQLAGLEPDVFTYNALIRGY 1078

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
              +   + A   +K+ +  GC P + TY  L  Q
Sbjct: 1079 SLSENPEHAYTVYKNMMVDGCNPNIGTYAQLPNQ 1112


>gi|255538538|ref|XP_002510334.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223551035|gb|EEF52521.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 947

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 135/479 (28%), Positives = 229/479 (47%), Gaps = 36/479 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           IL+ +C +G + +A  + D M +   +P    C  L+  L+R      A  V   +   G
Sbjct: 154 ILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHINRLG 213

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD  T ++MV   CK G +  A+  + EM   G E +V+TYN+++      G  ++A 
Sbjct: 214 IVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDMERAE 273

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA-IEGCSPDIVTYNSLVNF 301
              K    +G     +T T+LI+  C+QC +  A +VL +M   EG   D   Y  L++ 
Sbjct: 274 MVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDG 333

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+  K DDAV + + +L+ G+  N    N L++     G     +++L  M +    P 
Sbjct: 334 YCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPE 393

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++Y+ L++G C+ GLV +AI+ +N+M+    Q ++VT+N++L  LC+ G   +AL + H
Sbjct: 394 SYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWH 453

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL--------------------------- 454
           L+     +P  ++Y TL+D L K G   +A+ L                           
Sbjct: 454 LMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKME 513

Query: 455 --------YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
                   + +M E G  PD +T+RTLI G+C+   VEEA  + +++ K         Y 
Sbjct: 514 KMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYN 573

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +I GL KSKK    + +L  M      P+   + T++    D+G  ++A+  +  +IE
Sbjct: 574 SLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIE 632



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 209/451 (46%), Gaps = 35/451 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++++  T+N +L+  C  G   DA  +  +M +R   PD      L+  L ++    +A 
Sbjct: 425 IQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRAL 484

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   ++  G    T  +N M+ G CK  ++  A    + M   G EPD +TY T++   
Sbjct: 485 ALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGY 544

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G  ++A    +   ++   P +  Y  LI  + K       +++L +M ++G SP++
Sbjct: 545 CKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNV 604

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD----- 347
           VTY +L+   C +G+ D A     +++ +G  PN I  + ++ SL   G  D  +     
Sbjct: 605 VTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQK 664

Query: 348 ---------------------------KILDIMNEASHS---PTVFTYNILINGLCKYGL 377
                                      KI D ++E+S S   P    YNI I GLCK G 
Sbjct: 665 MVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGK 724

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           VD A   F+ ++ +   PD  TY T++      G +N+A  L   +     +P +ITYN 
Sbjct: 725 VDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNA 784

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+GL K G +++A  L+ ++   G++P+ I++  LI G+C+     EA+DL  ++ K G
Sbjct: 785 LINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEG 844

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
                  Y  +I+G CK   +  A  +L+ M
Sbjct: 845 ISPSLITYSALIYGFCKQGDMGKATNLLDEM 875



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 148/602 (24%), Positives = 270/602 (44%), Gaps = 54/602 (8%)

Query: 13  ELHCLPNLQWCSRQVS--LQHGVVNNHRTQFYSQLRDLGAGRN-------VSLKCRGLPG 63
           +L C+P+L+ C+R +S  ++ G  +N     Y  +  LG   +       V+  C+    
Sbjct: 176 KLGCVPSLRSCNRLLSSLVRKGESSN-AILVYDHINRLGIVPDVFTCSIMVNAYCKDGWV 234

Query: 64  NVCIDRVNEVDQDEWSSESHVLAVNKKLRGLT----ITKKSHDPSLPSSDGPFVENDEKT 119
           NV +D V E+D      E +V+  N  + G      + +      L    G  +  ++ T
Sbjct: 235 NVAVDFVKEMDY--LGFELNVVTYNSLIDGCVSIGDMERAEMVLKLMGERG--ILRNKVT 290

Query: 120 NNKILQNFCSRGKLTDASKLIDIMAR-RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
              +++ +C + KL +A K++  M R    + D +    LI G  R+ +++ A ++   M
Sbjct: 291 LTLLIKGYCRQCKLEEAEKVLREMERSEGMVLDEYAYGVLIDGYCRVCKMDDAVRLRDEM 350

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   +    N ++ G CK GQ+  A  LL  M     EP+  +Y+T++      G  
Sbjct: 351 LNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDWDLEPESYSYSTLMDGFCREGLV 410

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +AI  + + LR G    ++T+  L++ +C+      A+ V   M   G +PD V+Y +L
Sbjct: 411 TKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDALHVWHLMLKRGVTPDEVSYCTL 470

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K G++  A+ + N++L+RG   ++  +NT+++           ++  + M E   
Sbjct: 471 LDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMINGFCKMEKMIEAEETFNRMKELGF 530

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  LI+G CK G V+ A     +M  +   P I  YN+++G L K     E + 
Sbjct: 531 EPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMD 590

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +     SP ++TY TLI G   +G ++KA   Y  M+E G +P+ I    ++    
Sbjct: 591 LLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLY 650

Query: 479 RADQVEEA-----------------------------------VDLLKEIGKRGNKMRNS 503
           R  +++EA                                    D L E  K  +   + 
Sbjct: 651 RLGRIDEANMLLQKMVNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSV 710

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y + I GLCKS KVD A ++   ++   + PD+  + T++   +  G   +A+ L  ++
Sbjct: 711 VYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEM 770

Query: 564 IE 565
           ++
Sbjct: 771 LK 772



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/404 (29%), Positives = 187/404 (46%), Gaps = 35/404 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC   K+ +A +  + M      PD      LI G  ++  +E+A KV + M  
Sbjct: 503 NTMINGFCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEK 562

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
              +P    YN ++GGL K  + R  + LL EM + G  P+V+TY T++    D G+  +
Sbjct: 563 EAILPSIELYNSLIGGLFKSKKTREVMDLLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDK 622

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA------------------------ 276
           A   + D + KG  P +I  + ++  + +   I  A                        
Sbjct: 623 AFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKMVNLDVFLDHGYFDRLHK 682

Query: 277 -----------IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
                       + LD+ +     P+ V YN  +   CK GK DDA  + ++LL RG  P
Sbjct: 683 ADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSP 742

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           ++ TY TL+H   + G  +    + D M +   +P + TYN LINGLCK G +DRA   F
Sbjct: 743 DNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLF 802

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           +++  K   P++++YN ++   CK G   EAL L + +     SP LITY+ LI G  K+
Sbjct: 803 DKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQ 862

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           G M KA  L  +M E     +      L+ G  +  +V++   L
Sbjct: 863 GDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAKL 906



 Score =  155 bits (392), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/412 (25%), Positives = 199/412 (48%), Gaps = 38/412 (9%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
            ++M++   C++G I++A+ + D M   GC P + + N +L ++   G+   AI  +   
Sbjct: 150 VFDMILKIYCEKGMIKNALHVFDNMGKLGCVPSLRSCNRLLSSLVRKGESSNAILVYDHI 209

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
            R G  P + T +I++   CK   +  A++ + +M   G   ++VTYNSL++     G  
Sbjct: 210 NRLGIVPDVFTCSIMVNAYCKDGWVNVAVDFVKEMDYLGFELNVVTYNSLIDGCVSIGDM 269

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV--FTYN 366
           + A +V+  +  RG+  N +T   L+     +   +  +K+L  M E S    +  + Y 
Sbjct: 270 ERAEMVLKLMGERGILRNKVTLTLLIKGYCRQCKLEEAEKVLREM-ERSEGMVLDEYAYG 328

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           +LI+G C+   +D A+   ++M++   + ++   N ++   CK G ++EA +LL  +   
Sbjct: 329 VLIDGYCRVCKMDDAVRLRDEMLNVGLRMNLFICNALINGYCKNGQVSEAERLLMRMVDW 388

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P   +Y+TL+DG  ++G + KA+ +Y +M+  GI  + +TH +L+ G CR    E+A
Sbjct: 389 DLEPESYSYSTLMDGFCREGLVTKAISVYNEMLRVGIQSNVVTHNSLLKGLCRVGAFEDA 448

Query: 487 ----------------------VDLLKEIGK-------------RGNKMRNSAYRLVIHG 511
                                 +DLL ++G+             RG      A+  +I+G
Sbjct: 449 LHVWHLMLKRGVTPDEVSYCTLLDLLFKMGEFFRALALWNDILARGYGRSTYAFNTMING 508

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            CK +K+  A +    M    ++PD   + T++      G  EEA+K+ +K+
Sbjct: 509 FCKMEKMIEAEETFNRMKELGFEPDGVTYRTLIDGYCKLGNVEEAFKVKEKM 560



 Score =  149 bits (375), Expect = 5e-33,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 174/381 (45%), Gaps = 37/381 (9%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   ++  +C  G + +A K+ + M +   +P      +LI GL +  +  +   
Sbjct: 531 EPDGVTYRTLIDGYCKLGNVEEAFKVKEKMEKEAILPSIELYNSLIGGLFKSKKTREVMD 590

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L  M + G  P+ +TY  ++ G C  G++  A     +M   G  P+VI  + I+ +++
Sbjct: 591 LLSEMCLKGLSPNVVTYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLY 650

Query: 234 DNGKFKQA---------------IGFWKDQLRKG---------------------CPPYL 257
             G+  +A                G++ D+L K                        P  
Sbjct: 651 RLGRIDEANMLLQKMVNLDVFLDHGYF-DRLHKADDGNLDSQKIADTLDESSKSFSLPNS 709

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           + Y I I  +CK   +  A ++   + + G SPD  TY +L++     G  +DA  + + 
Sbjct: 710 VVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDE 769

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +L RG+ PN ITYN L++ L   G  D   K+ D ++    +P V +YNILI+G CK G 
Sbjct: 770 MLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGN 829

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
              A++  N+M+ +   P ++TY+ ++   CK+G + +A  LL  +        +  +  
Sbjct: 830 TREALDLRNKMLKEGISPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVK 889

Query: 438 LIDGLAKKGCMEKAMVLYGQM 458
           L++G  K G ++K   L+  M
Sbjct: 890 LVEGHVKCGEVKKIAKLHNMM 910



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 79/306 (25%), Positives = 138/306 (45%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G+L  A      M  +   P+   C  ++  L R+ RI++A+ +LQ M
Sbjct: 606 TYGTLIAGWCDEGRLDKAFTAYFDMIEKGFAPNVIICSKIVSSLYRLGRIDEANMLLQKM 665

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V      D   ++ +          +     LDE S S   P+ + YN  +  +  +GK 
Sbjct: 666 VNLDVFLDHGYFDRLHKADDGNLDSQKIADTLDESSKSFSLPNSVVYNIAIAGLCKSGKV 725

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   +   L +G  P   TY  LI        +  A  + D+M   G +P+I+TYN+L
Sbjct: 726 DDAKKIFSSLLLRGFSPDNFTYCTLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNAL 785

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G  D A  + + L  +G+ PN I+YN L+      G       + + M +   
Sbjct: 786 INGLCKSGNLDRAQKLFDKLHLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGI 845

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP++ TY+ LI G CK G + +A N  ++M       +I  +  ++    K G + +  +
Sbjct: 846 SPSLITYSALIYGFCKQGDMGKATNLLDEMRELFADQNIAKFVKLVEGHVKCGEVKKIAK 905

Query: 419 LLHLLN 424
           L ++++
Sbjct: 906 LHNMMH 911



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 11/214 (5%)

Query: 95  TITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FH 153
           T+ + S   SLP+S            N  +   C  GK+ DA K+   +  R   PD F 
Sbjct: 696 TLDESSKSFSLPNS---------VVYNIAIAGLCKSGKVDDAKKIFSSLLLRGFSPDNFT 746

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
           +C  LI G      +  A  +   M+  G  P+ ITYN ++ GLCK G +  A  L D++
Sbjct: 747 YC-TLIHGYSAAGNVNDAFSLRDEMLKRGLAPNIITYNALINGLCKSGNLDRAQKLFDKL 805

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
            + G  P+VI+YN ++     NG  ++A+      L++G  P LITY+ LI   CKQ  +
Sbjct: 806 HLKGLAPNVISYNILIDGYCKNGNTREALDLRNKMLKEGISPSLITYSALIYGFCKQGDM 865

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            +A  +LD+M       +I  +  LV    K G+
Sbjct: 866 GKATNLLDEMRELFADQNIAKFVKLVEGHVKCGE 899


>gi|302786208|ref|XP_002974875.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
 gi|300157770|gb|EFJ24395.1| hypothetical protein SELMODRAFT_150113 [Selaginella moellendorffii]
          Length = 382

 Score =  203 bits (516), Expect = 2e-49,   Method: Compositional matrix adjust.
 Identities = 110/360 (30%), Positives = 200/360 (55%), Gaps = 5/360 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDI-MARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           +++T + ILQ  C  G++  A +  D  +   +  PD      LI GL ++ R++ A  +
Sbjct: 9   NDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLGRVDAAFDL 68

Query: 175 LQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            + MV +GG  P+  TYN +V GLCK+ ++ +A A++ E       PDV+TYNT++  +F
Sbjct: 69  FRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALF 128

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+  +A+  +     +G  P L+++  +I  +C+   +A A+EV ++M      P++V
Sbjct: 129 QLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLV 188

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY+ +++  CK  + D+A  +++ ++S G  P+ + Y  L+    + G  D+   +L  M
Sbjct: 189 TYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRM 248

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P V TY ++I+ LCK G VD A   F ++V+  C P++VTY+ ++G  C+   +
Sbjct: 249 VSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRV 308

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +E  +++  +   +C P ++TYNT+I GL+     E+A  ++ +M E G  PD  T+R L
Sbjct: 309 DEGGKVMREM---ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGL 365



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/355 (29%), Positives = 185/355 (52%), Gaps = 5/355 (1%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQC 271
           M V G + +  T + IL+ +   G+  QA+  +   L      P +++YT LI  +CK  
Sbjct: 1   MDVEGMQCNDRTTSIILQGLCRCGRVAQALEHFDASLELAHAQPDVVSYTTLINGLCKLG 60

Query: 272 GIARAIEVLDDM-AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
            +  A ++   M A  GC P+  TYN+LV+  CKQ + D A  VI     R   P+ +TY
Sbjct: 61  RVDAAFDLFRKMVAAGGCRPNAFTYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTY 120

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           NTL+ +L   G  D        M E  + PT+ ++N +I GLC+   +  A+  FN+M+ 
Sbjct: 121 NTLMAALFQLGRVDEALATFTQMTEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMID 180

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           ++  P++VTY+ V+  LCK   L+EA QLL  +    C P L+ Y  L+ G +  G ++ 
Sbjct: 181 RDFHPNLVTYSVVIDGLCKSDQLDEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDS 240

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+ L  +M+  G  PD +T+  +I   C+  +V++A ++ +E+           Y  +I 
Sbjct: 241 ALGLLRRMVSQGCIPDVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIG 300

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           G C++ +VD   +V+  M     +P+   ++T++  ++     EEAY +++++ E
Sbjct: 301 GYCRASRVDEGGKVMREMAC---RPNVVTYNTMIWGLSMVDRNEEAYGMFREMSE 352



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 80/291 (27%), Positives = 141/291 (48%), Gaps = 7/291 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C + +L  A  +I    +R+  PD      L+  L ++ R+++A      M
Sbjct: 84  TYNALVDGLCKQDRLDAARAVIAEARKRDFAPDVVTYNTLMAALFQLGRVDEALATFTQM 143

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VP  +++N ++ GLC+  ++  A+ + +EM      P+++TY+ ++  +  + + 
Sbjct: 144 TEEGYVPTLVSFNAIITGLCRARRLADALEVFNEMIDRDFHPNLVTYSVVIDGLCKSDQL 203

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A       + +GC P L+ YT L+        +  A+ +L  M  +GC PD+VTY  +
Sbjct: 204 DEAQQLLDRMVSEGCRPDLVAYTPLVLGFSAAGRLDSALGLLRRMVSQGCIPDVVTYTVV 263

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL--HSLGSRGCWDAVDKILDIMNEA 356
           ++  CK G+ DDA  +   L++    PN +TY+ L+  +   SR     VD+   +M E 
Sbjct: 264 IDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASR-----VDEGGKVMREM 318

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +  P V TYN +I GL      + A   F +M      PD  TY  +  AL
Sbjct: 319 ACRPNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369



 Score = 49.7 bits (117), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 32/117 (27%), Positives = 52/117 (44%), Gaps = 3/117 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G++ DA ++   +      P+      LI G  R  R+++  KV+
Sbjct: 256 DVVTYTVVIDKLCKVGRVDDAHEIFRELVANKCSPNVVTYSALIGGYCRASRVDEGGKVM 315

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           + M      P+ +TYN M+ GL    +   A  +  EMS  G  PD  TY  + R +
Sbjct: 316 REMACR---PNVVTYNTMIWGLSMVDRNEEAYGMFREMSECGFVPDARTYRGLKRAL 369


>gi|357481045|ref|XP_003610808.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355512143|gb|AES93766.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1084

 Score =  203 bits (516), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 128/479 (26%), Positives = 234/479 (48%), Gaps = 20/479 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T +K++   C   K+  A  L + M R   +P  +    LI    +   I++A K  
Sbjct: 459 DDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWF 518

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+ +TY  ++    K  Q+  A  L + M + GC+P+V+TY  ++      
Sbjct: 519 DEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKA 578

Query: 236 GKFKQAIGFWK-----------DQLRK----GCP-PYLITYTILIEQVCKQCGIARAIEV 279
           G+ ++A   +            D+  K     C  P +ITY  L++ +CK   +  A E+
Sbjct: 579 GQIEKACQIYARMRGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHEL 638

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           LD M   GC P+ + Y+++++  CK GK  DA  V   +  RG  PN  TY++ +  L  
Sbjct: 639 LDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFK 698

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
               D V K+L  M E S +P V  Y  +++GLCK G  D A     +M  K C P++VT
Sbjct: 699 DNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVT 758

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  ++    K G + + L+L   +    C+P  ITY  LI+     G +++A  L  +M 
Sbjct: 759 YTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMK 818

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           +       ++HR +I GF  + +   ++ LL E+ +  +   +S YR++I    K+ +++
Sbjct: 819 QTYWPKHILSHRKIIEGF--SQEFITSIGLLDELSENESVPVDSLYRILIDNYIKAGRLE 876

Query: 520 MAIQVLELMIS--SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLL 576
           +A+ +LE + S  S    +  +++++++ ++     ++A +L+  +I   V  + + L+
Sbjct: 877 VALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILV 935



 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 113/407 (27%), Positives = 205/407 (50%), Gaps = 19/407 (4%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           N  R L    + ++A K++  M+  G VPD  TY+ ++G LC   ++  A +L +EM  +
Sbjct: 430 NFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRN 489

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P V TY  ++ +    G  +QA  ++ + L KGC P ++TYT LI    K   +  A
Sbjct: 490 GIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVA 549

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            E+ + M +EGC P++VTY +L++  CK G+ + A  +   +  RG   +S         
Sbjct: 550 DELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM--RGDIESS--------- 598

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
                    +DK   + +     P V TY  L++GLCK   V  A    + M++  C+P+
Sbjct: 599 --------DMDKYFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPN 650

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            + Y+ V+   CK G L +A ++   ++    SP L TY++ ID L K   ++  + +  
Sbjct: 651 QIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLS 710

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M+EN  +P+ + +  ++ G C+  + +EA  L+ ++ ++G       Y  +I G  KS 
Sbjct: 711 KMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFGKSG 770

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           K++  +++   M S    P+   +  ++     +G+ +EAYKL  ++
Sbjct: 771 KIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEM 817



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/472 (27%), Positives = 217/472 (45%), Gaps = 24/472 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T +    + C  GK  +A  LID     + +PD  F   ++ GL      E+A  +L
Sbjct: 245 DRYTLSCFAYSLCKGGKCREAFDLID--EAEDFVPDTVFYNRMVSGLCEASLFEEAMDIL 302

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  S  +P+ +TY +++ G  ++GQ+     +L  M   GC P+   +N+++     +
Sbjct: 303 HRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKS 362

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK-----QCGIARAIE-VLDDMAIEGCS 289
             +  A   +K  ++ GC P  + Y I I  VC         I   +E    +M   G  
Sbjct: 363 RDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEMLDLGVV 422

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            + V  ++     C  GK+D A  +I  ++ +G  P+  TY+ ++  L      +    +
Sbjct: 423 LNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVEKAFSL 482

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            + M      P+V+TY ILI+  CK GL+ +A   F++M+ K C P++VTY  ++ A  K
Sbjct: 483 FEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALIHAYLK 542

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM----------- 458
              +  A +L  ++    C P ++TY  LIDG  K G +EKA  +Y +M           
Sbjct: 543 AKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARMRGDIESSDMDK 602

Query: 459 -----MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
                  N   P+ IT+  L+ G C+A++V+EA +LL  +   G +     Y  VI G C
Sbjct: 603 YFKLDHNNCEGPNVITYGALVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFC 662

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K  K+  A +V   M    Y P+   +S+ +  +  D   +   K+  K++E
Sbjct: 663 KIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLE 714



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/467 (24%), Positives = 203/467 (43%), Gaps = 63/467 (13%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI+  +R D+++ A  V + M+    V D  T +     LCK G+ R A  L+DE     
Sbjct: 217 LIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFAYSLCKGGKCREAFDLIDE--AED 274

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PD + YN ++  + +   F++A+          C P ++TY IL+    ++  + R  
Sbjct: 275 FVPDTVFYNRMVSGLCEASLFEEAMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCK 334

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L  M  EGC P+   +NSL++  CK   Y  A  +   ++  G +P  + YN  + S+
Sbjct: 335 RILSMMITEGCYPNREIFNSLIHAYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSV 394

Query: 338 GSR-----------------------------------------GCWDAVDKILDIMNEA 356
            S                                          G +D   KI+  M   
Sbjct: 395 CSNEEQPSSDILDLVEKAYSEMLDLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGK 454

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P   TY+ +I  LC    V++A + F +M      P + TY  ++ + CK G++ +A
Sbjct: 455 GFVPDDSTYSKVIGFLCDASKVEKAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQA 514

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +    +    C+P ++TY  LI    K   M  A  L+  M+  G  P+ +T+  LI G
Sbjct: 515 RKWFDEMLHKGCTPNVVTYTALIHAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDG 574

Query: 477 FCRADQVEEAVDLLKEIGKRGN----------KMRNS--------AYRLVIHGLCKSKKV 518
            C+A Q+E+A  +   +  RG+          K+ ++         Y  ++ GLCK+ +V
Sbjct: 575 HCKAGQIEKACQIYARM--RGDIESSDMDKYFKLDHNNCEGPNVITYGALVDGLCKANRV 632

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             A ++L+ M++   +P+  V+  ++      G  ++A +++ K+ E
Sbjct: 633 KEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSE 679



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 168/338 (49%), Gaps = 4/338 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+ GL + +R+++A ++L  M+  G  P+ I Y+ ++ G CK G+++ A  +  +MS  G
Sbjct: 622 LVDGLCKANRVKEAHELLDTMLAHGCEPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERG 681

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P++ TY++ +  +F + +    +      L   C P ++ YT +++ +CK      A 
Sbjct: 682 YSPNLYTYSSFIDCLFKDNRLDLVLKVLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAY 741

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +++  M  +GC+P++VTY ++++   K GK +  + +  ++ S+G  PN ITY  L++  
Sbjct: 742 KLMLKMEEKGCNPNVVTYTAMIDGFGKSGKIEQCLELFRDMCSKGCAPNFITYRVLINHC 801

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            S G  D   K+LD M +      + ++  +I G  +  +   +I   +++      P  
Sbjct: 802 CSNGLLDEAYKLLDEMKQTYWPKHILSHRKIIEGFSQEFIT--SIGLLDELSENESVPVD 859

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC--LITYNTLIDGLAKKGCMEKAMVLY 455
             Y  ++    K G L  AL LL  ++ S          Y +LI+ L+    ++KA+ LY
Sbjct: 860 SLYRILIDNYIKAGRLEVALDLLEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELY 919

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
             M+   + P+      LI G  + D+ +EA+ L   I
Sbjct: 920 ASMISKNVVPELSILVHLIKGLIKVDKWQEALQLSDSI 957



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 87/312 (27%), Positives = 151/312 (48%), Gaps = 12/312 (3%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E ++   + ++  FC  GKL DA ++   M+ R   P+ +   + I  L + +R++   K
Sbjct: 648 EPNQIVYDAVIDGFCKIGKLQDAQEVFTKMSERGYSPNLYTYSSFIDCLFKDNRLDLVLK 707

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL  M+ +   P+ + Y  MV GLCK G+   A  L+ +M   GC P+V+TY  ++    
Sbjct: 708 VLSKMLENSCTPNVVIYTEMVDGLCKIGKTDEAYKLMLKMEEKGCNPNVVTYTAMIDGFG 767

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +GK +Q +  ++D   KGC P  ITY +LI   C    +  A ++LD+M        I+
Sbjct: 768 KSGKIEQCLELFRDMCSKGCAPNFITYRVLINHCCSNGLLDEAYKLLDEMKQTYWPKHIL 827

Query: 294 TYNSLVN-FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           ++  ++  FS    ++  ++ +++ L      P    Y  L+ +    G    ++  LD+
Sbjct: 828 SHRKIIEGFS---QEFITSIGLLDELSENESVPVDSLYRILIDNYIKAG---RLEVALDL 881

Query: 353 MNEASHSPT-----VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           + E S SP+      + Y  LI  L     VD+A+  +  M+SKN  P++     ++  L
Sbjct: 882 LEEISSSPSHAVSNKYLYASLIENLSHASKVDKALELYASMISKNVVPELSILVHLIKGL 941

Query: 408 CKEGMLNEALQL 419
            K     EALQL
Sbjct: 942 IKVDKWQEALQL 953



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 95/414 (22%), Positives = 171/414 (41%), Gaps = 43/414 (10%)

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N +V   C+ G    A+  L  +   G +P   TYN +++      K   A    ++ L 
Sbjct: 180 NFLVRKCCRNGWWNMALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLS 239

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
                   T +     +CK      A +++D+   E   PD V YN +V+  C+   +++
Sbjct: 240 YAFVMDRYTLSCFAYSLCKGGKCREAFDLIDEA--EDFVPDTVFYNRMVSGLCEASLFEE 297

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ +++ + S    PN +TY  LL     +G      +IL +M      P    +N LI+
Sbjct: 298 AMDILHRMRSSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIH 357

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA------------------------ 406
             CK      A   F +M+   CQP  + YN  +G+                        
Sbjct: 358 AYCKSRDYSYAYKLFKKMIKCGCQPGYLVYNIFIGSVCSNEEQPSSDILDLVEKAYSEML 417

Query: 407 -----------------LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
                            LC  G  ++A +++  + G    P   TY+ +I  L     +E
Sbjct: 418 DLGVVLNKVNVSNFARCLCGAGKFDQAFKIICEMMGKGFVPDDSTYSKVIGFLCDASKVE 477

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KA  L+ +M  NGI P   T+  LI  FC+A  +++A     E+  +G       Y  +I
Sbjct: 478 KAFSLFEEMKRNGIVPSVYTYTILIDSFCKAGLIQQARKWFDEMLHKGCTPNVVTYTALI 537

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           H   K+K++ +A ++ E+M+    KP+   ++ ++      G  E+A +++ ++
Sbjct: 538 HAYLKAKQMPVADELFEMMLLEGCKPNVVTYTALIDGHCKAGQIEKACQIYARM 591



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 105/251 (41%), Gaps = 51/251 (20%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT--YNTVLGALCKEGMLN 414
           SH+P VF   + + G C     DR    F  M  K+   +++    N ++   C+ G  N
Sbjct: 136 SHTPQVFDKLLDLLG-CNVNADDRVPLKF-LMEIKDDDHELLRRLLNFLVRKCCRNGWWN 193

Query: 415 EALQLLHLLNGSSCSPCLITYNTLI------DGLAKKGCMEKAMVLYGQMME-------- 460
            AL+ L  L      P   TYN LI      D L     +++ M+ Y  +M+        
Sbjct: 194 MALEELGRLKDFGYKPSQTTYNALIQVFLRADKLDTAYLVKREMLSYAFVMDRYTLSCFA 253

Query: 461 -------------------NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
                                  PD + +  ++ G C A   EEA+D+L       ++MR
Sbjct: 254 YSLCKGGKCREAFDLIDEAEDFVPDTVFYNRMVSGLCEASLFEEAMDIL-------HRMR 306

Query: 502 NSA-------YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           +S+       YR+++ G  +  ++    ++L +MI+    P+  +F++++          
Sbjct: 307 SSSCIPNVVTYRILLSGCLRKGQLGRCKRILSMMITEGCYPNREIFNSLIHAYCKSRDYS 366

Query: 555 EAYKLWQKLIE 565
            AYKL++K+I+
Sbjct: 367 YAYKLFKKMIK 377


>gi|224092436|ref|XP_002309609.1| predicted protein [Populus trichocarpa]
 gi|222855585|gb|EEE93132.1| predicted protein [Populus trichocarpa]
          Length = 841

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 127/452 (28%), Positives = 226/452 (50%), Gaps = 1/452 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I++  C  G +  A ++ + M  ++  P      +LIRG ++    E+ASK+    V + 
Sbjct: 370 IIEWCCKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAV-AC 428

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
           G+ +  TYN ++  LCK G++  A ++ ++M   G  P V++YN ++      G    A 
Sbjct: 429 GIANVFTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSAN 488

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G + + L KG  P LITY++L++   K+     A  + D M  E  +P   T N ++N  
Sbjct: 489 GVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGL 548

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G+  ++   +  L+  G  P  +TYN ++      G  ++   +   M +   SP V
Sbjct: 549 CKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNV 608

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FTY  LING CK   +D A+   ++M +K  + D+  Y  ++   C++G +  A QLL  
Sbjct: 609 FTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSE 668

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L     SP  + Y+++I G  K   ME A+ L+ +M+  GI  D   + TLI G  +  +
Sbjct: 669 LQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGK 728

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +  A +L  E+  +G       Y ++IHGLC   +++ A ++LE M      P   +++T
Sbjct: 729 LLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNT 788

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           ++     +G  +EA++L  ++++  +    TT
Sbjct: 789 LITGHFKEGNLQEAFRLHNEMLDKGLVPDDTT 820



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 223/452 (49%), Gaps = 1/452 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D +  + +++  C +     A  L+  M  +  +P       +I   ++  ++ +A 
Sbjct: 255 VELDARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAV 314

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KV   M+  G   + +    ++ G CK+G + SA+ L D+M+ +G  P+ +TY  I+   
Sbjct: 315 KVKGEMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWC 374

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG   +A   +     K   P +     LI    K      A ++ D+    G + ++
Sbjct: 375 CKNGNMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIA-NV 433

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYNSL+++ CK+GK  +A  +   ++ +G+ P+ ++YN ++     +G  D+ + +   
Sbjct: 434 FTYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVE 493

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E    P + TY++L++G  K G  + A   +++M  +N  P   T N ++  LCK G 
Sbjct: 494 MLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGR 553

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            +E+   L  L      P  +TYN +IDG  K+G +  A+ +Y +M + G+SP+  T+  
Sbjct: 554 TSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTN 613

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI GFC+++ ++ A+ ++ E+  +G ++  + Y  +I G C+   +  A Q+L  +    
Sbjct: 614 LINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVG 673

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+  V+S+++         E A  L +++I
Sbjct: 674 LSPNKVVYSSMISGFRKLQNMEAALHLHKRMI 705



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/463 (25%), Positives = 212/463 (45%), Gaps = 38/463 (8%)

Query: 137 SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGG 196
           ++LI+   R +   D      L+   ++  RI  A      ++    VP     N+ +  
Sbjct: 139 ARLIESSRRLDFESDSRVFNYLLNSYVKTKRINDAVDCFNSLIEKDIVPCLTVMNIFLSE 198

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           L K   IR A  + ++M+  G + D  T + ++R     GK ++A G++++   KG    
Sbjct: 199 LVKNNMIREARDVYNKMASKGVKGDCATISVMIRASMREGKLEEAEGWFREAKNKGVELD 258

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
              Y+I+IE VCK+     A+ +L +M  +G  P  V +  ++    KQGK  +AV V  
Sbjct: 259 ARAYSIVIEAVCKKPDSVAALGLLREMRDKGWVPHEVIFTRVIGVCMKQGKMLEAVKVKG 318

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +LS G   N +   TL+     +G  D+  ++ D MNE    P   TY ++I   CK G
Sbjct: 319 EMLSCGKPMNVVVATTLMKGYCKQGDLDSALELFDKMNENGICPNNVTYAVIIEWCCKNG 378

Query: 377 LVDRAINSFNQMVSKNCQP----------------------------------DIVTYNT 402
            +D+A   +NQM +K+  P                                  ++ TYN+
Sbjct: 379 NMDKAYEIYNQMKNKDISPTVFNVNSLIRGYLKARSPEEASKLFDEAVACGIANVFTYNS 438

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           +L  LCKEG ++EA  +   +      P +++YN +I G  ++G M+ A  ++ +M+E G
Sbjct: 439 LLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEMLEKG 498

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY--RLVIHGLCKSKKVDM 520
           + P+ IT+  L+ G+ +    E A  L   +  RG  +  S +   ++I+GLCK+ +   
Sbjct: 499 LKPNLITYSVLMDGYFKKGDTEYAFGLYDRM--RGENIAPSDFTCNIIINGLCKAGRTSE 556

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +   L+ ++   + P    ++ I+     +G    A  ++ ++
Sbjct: 557 SQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEM 599



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/396 (27%), Positives = 191/396 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   C  GK+++A  + + M R+   P      N+I G  +   ++ A+ V   M
Sbjct: 435 TYNSLLSWLCKEGKMSEACSIWEKMVRKGVRPSVVSYNNMILGHCQQGDMDSANGVFVEM 494

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+ ITY++++ G  K+G    A  L D M      P   T N I+  +   G+ 
Sbjct: 495 LEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNIIINGLCKAGRT 554

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            ++    K  +++G  P  +TY  +I+   K+  +  A+ V  +M   G SP++ TY +L
Sbjct: 555 SESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIGVSPNVFTYTNL 614

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK    D A+ V++ + ++G+E +   Y  L+     +G      ++L  + E   
Sbjct: 615 INGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNASQLLSELQEVGL 674

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP    Y+ +I+G  K   ++ A++   +M+++    D+  Y T++  L KEG L  A +
Sbjct: 675 SPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGLLKEGKLLFASE 734

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P LITY+ LI GL  KG +E A  +   M    ++P    + TLI G  
Sbjct: 735 LYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHF 794

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +   ++EA  L  E+  +G    ++ Y ++++G  K
Sbjct: 795 KEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVK 830



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 96/351 (27%), Positives = 159/351 (45%), Gaps = 42/351 (11%)

Query: 105 LPSSDGPFVENDEK-------TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN 157
           + S++G FVE  EK       T + ++  +  +G    A  L D M   N  P    C  
Sbjct: 484 MDSANGVFVEMLEKGLKPNLITYSVLMDGYFKKGDTEYAFGLYDRMRGENIAPSDFTCNI 543

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I GL +  R  ++   L+ +V  G +P  +TYN ++ G  K G + SA+A+  EM   G
Sbjct: 544 IINGLCKAGRTSESQDRLKKLVQEGFIPTCMTYNCIIDGFVKEGSVNSALAVYTEMCKIG 603

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P+V TY  ++     +     A+    +   KG    +  Y  LI+  C++  +  A 
Sbjct: 604 VSPNVFTYTNLINGFCKSNNMDLALKVMDEMKNKGIELDVTVYCALIDGFCRKGDMVNAS 663

Query: 278 EVLDDMAIEGCSPDIVTYNSLVN----------------------FSC------------ 303
           ++L ++   G SP+ V Y+S+++                        C            
Sbjct: 664 QLLSELQEVGLSPNKVVYSSMISGFRKLQNMEAALHLHKRMINEGIPCDLQIYTTLISGL 723

Query: 304 -KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+GK   A  +   +L++G+ P+ ITY+ L+H L ++G  +   KIL+ M+    +PTV
Sbjct: 724 LKEGKLLFASELYAEMLAKGIMPDLITYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTV 783

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           F YN LI G  K G +  A    N+M+ K   PD  TY+ ++    K+G L
Sbjct: 784 FIYNTLITGHFKEGNLQEAFRLHNEMLDKGLVPDDTTYDILVNGKVKDGNL 834



 Score = 47.8 bits (112), Expect = 0.016,   Method: Compositional matrix adjust.
 Identities = 25/90 (27%), Positives = 48/90 (53%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C++G+L +A K+++ M R+   P       LI G  +   +++A ++   M
Sbjct: 750 TYSVLIHGLCNKGQLENAQKILEDMDRKCMTPTVFIYNTLITGHFKEGNLQEAFRLHNEM 809

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +  G VPD  TY+++V G  K G + S  +
Sbjct: 810 LDKGLVPDDTTYDILVNGKVKDGNLFSGAS 839


>gi|255566084|ref|XP_002524030.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223536757|gb|EEF38398.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1016

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 131/509 (25%), Positives = 239/509 (46%), Gaps = 57/509 (11%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N ++  FC  G +  A   + IM +++   D   C  L++G  RI   +   
Sbjct: 73  VEVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCRIGLAKYGE 132

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +++  +V  G   D I +N ++ G CK G++  A+ L++ M   G   D+++YNT++   
Sbjct: 133 RIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGF 192

Query: 233 FDNGKFKQAIGFWK-----------------DQLRK----GCPPYLITYTILIEQVCKQC 271
              G++ +A                      D+++K         LITYT +I   CKQ 
Sbjct: 193 CKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQH 252

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
           G+  A  + ++M I G  PD+VTY+S+VN  CK G+  +A  ++  +   G++PN + Y 
Sbjct: 253 GLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYT 312

Query: 332 TLLHSLGSRG-CWDA----------------------------------VDKILDIMNEA 356
           TL+ SL   G  W+A                                   + +   +++ 
Sbjct: 313 TLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKL 372

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           +  P   TY  LI+G CK G ++R  +   +M  K+  P+++TY++++    K+G+L+EA
Sbjct: 373 NLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEA 432

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           + ++  +   +  P    Y  LIDG  K G  E A  LY +M  +G+  +++    L+  
Sbjct: 433 INVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNN 492

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             R  +++EA +LLK++  RG  + +  Y  ++ G  K+ K   A+ ++E M       D
Sbjct: 493 LKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFD 552

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              ++ ++  + + G   EA  ++  +IE
Sbjct: 553 VVTYNVLINGLLEHG-KYEAKSVYSGMIE 580



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/475 (24%), Positives = 219/475 (46%), Gaps = 22/475 (4%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G+++ A  L++ M +   + D      LI G  +    +KA  +L  +  
Sbjct: 151 NTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISE 210

Query: 181 SGGVPDT---------------------ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE 219
           S GV D+                     ITY  ++   CK+  +  A AL +EM ++G  
Sbjct: 211 SRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFL 270

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           PDV+TY++I+  +  +G+  +A    ++  + G  P  + YT LI+ + K      A   
Sbjct: 271 PDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFAC 330

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
              + + G + D+V   +LV+   K  K  +A  +   L    + PNSITY  L+     
Sbjct: 331 QSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCK 390

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G  + V+ +L  M E   +P V TY+ +ING  K G++D AIN   +M+ +N  P+   
Sbjct: 391 VGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYV 450

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  ++   CK G    A  L + +  S      + ++ L++ L +   M++A  L   + 
Sbjct: 451 YAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVT 510

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
             G+  D + + +L+ GF +A +   A+++++E+ ++        Y ++I+GL +  K +
Sbjct: 511 SRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE 570

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            A  V   MI     P+   ++ ++K     G  + A +LW ++   K+     T
Sbjct: 571 -AKSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSIT 624



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 217/449 (48%), Gaps = 28/449 (6%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M + N +P       LI        + +   +   M+ S   P+  T+N++V   CK G 
Sbjct: 1   MRKHNIVPTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGN 60

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +  A+ LL  + V   E D +TYNT++     +G   QA GF    ++K      IT  I
Sbjct: 61  LILALDLLRNVDV---EVDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNI 117

Query: 263 LIEQVCKQCGIARAIE-VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           L++  C+  G+A+  E ++D++   G   D++ +N+L++  CK G+   A+ ++  +   
Sbjct: 118 LVKGFCR-IGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKE 176

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH-SPTVF----------------- 363
           G+  + ++YNTL++    RG +D    +L  ++E+     +VF                 
Sbjct: 177 GLLSDIVSYNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEA 236

Query: 364 ---TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TY  +I+  CK   ++ A   + +M+     PD+VTY++++  LCK+G L+EA +LL
Sbjct: 237 DLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELL 296

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P  + Y TLID L K G   +A     Q++  G++ D +   TL+ G  ++
Sbjct: 297 REMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKS 356

Query: 481 DQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
            + +EA D+ + + K  N + NS  Y  +I G CK   ++    +L+ M      P+   
Sbjct: 357 SKPKEAEDMFRALSKL-NLIPNSITYTALIDGYCKVGDMERVESLLQEMEEKHINPNVIT 415

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +S+I+      G+ +EA  + +K+++  +
Sbjct: 416 YSSIINGYTKKGILDEAINVMKKMLDQNI 444



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 110/466 (23%), Positives = 225/466 (48%), Gaps = 5/466 (1%)

Query: 102 DPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRG 161
           D  +   D   +E D  T   I+  +C +  L +A  L + M     +PD     +++ G
Sbjct: 223 DDRIKKDDNLNLEADLITYTTIISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNG 282

Query: 162 LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
           L +  R+ +A ++L+ M   G  P+ + Y  ++  L K G    A A   ++ V G   D
Sbjct: 283 LCKDGRLSEAQELLREMKKMGVDPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLD 342

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           ++   T++  +F + K K+A   ++   +    P  ITYT LI+  CK   + R   +L 
Sbjct: 343 LVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMERVESLLQ 402

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +M  +  +P+++TY+S++N   K+G  D+A+ V+  +L + + PN+  Y  L+      G
Sbjct: 403 EMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAG 462

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             +    + + M  +        +++L+N L +   +D A      + S+    D V Y 
Sbjct: 463 KQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYT 522

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           +++    K G  + AL ++  +   S    ++TYN LI+GL + G  E A  +Y  M+E 
Sbjct: 523 SLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVYSGMIEM 581

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY--RLVIHGLCKSKKVD 519
           G++P+  T+  +I  +C+  +++ A++L  E+  + +K+  S+     ++ GL ++ +++
Sbjct: 582 GLAPNQATYNIMIKAYCKQGELDNALELWNEM--KSHKIMPSSITCNTLVVGLSEAGEIE 639

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            A+ VL  M      P+  +   ++   +  G      ++ ++L++
Sbjct: 640 KAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVD 685



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 211/423 (49%), Gaps = 3/423 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           ++  +C  GK   A+ L + M     ++ +  F + L+  L R  R+++A ++L+ +   
Sbjct: 454 LIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDV-LVNNLKRGKRMDEAEELLKDVTSR 512

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G + D + Y  ++ G  K G+  +A+ +++EM+      DV+TYN ++  + ++GK+ +A
Sbjct: 513 GLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKY-EA 571

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +   +  G  P   TY I+I+  CKQ  +  A+E+ ++M      P  +T N+LV  
Sbjct: 572 KSVYSGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVG 631

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             + G+ + A+ V+N +   G+ PN + +  LL++    G  +AV ++ + + +      
Sbjct: 632 LSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKIN 691

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
              YN LI   C+  +  +A +    M+      D VTYN ++   C+   + +AL    
Sbjct: 692 QEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYT 751

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +     SP ++TYN L+ GL   G M +   L+ +M ENG++PD  T+ TLI G+ +  
Sbjct: 752 QMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIG 811

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
             +E++ L  E+  +G   + S Y ++I    K  K+D A ++L  M      P  + + 
Sbjct: 812 NKKESIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYD 871

Query: 542 TIV 544
            ++
Sbjct: 872 ILI 874



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 204/455 (44%), Gaps = 36/455 (7%)

Query: 146 RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRS 205
           R    D   C  L+ GL +  + ++A  + + +     +P++ITY  ++ G CK G +  
Sbjct: 337 RGMTLDLVMCTTLVDGLFKSSKPKEAEDMFRALSKLNLIPNSITYTALIDGYCKVGDMER 396

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
             +LL EM      P+VITY++I+      G   +AI   K  L +   P    Y ILI+
Sbjct: 397 VESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILID 456

Query: 266 QVCKQ---------------CGIA--------------------RAIEVLDDMAIEGCSP 290
             CK                 G+                      A E+L D+   G   
Sbjct: 457 GYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLL 516

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D V Y SL++   K GK   A+ ++  +  + +  + +TYN L++ L   G ++A   + 
Sbjct: 517 DHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYEA-KSVY 575

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M E   +P   TYNI+I   CK G +D A+  +N+M S    P  +T NT++  L + 
Sbjct: 576 SGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEA 635

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G + +A+ +L+ ++     P L+ +  L++  +K G     + ++ Q+++ G+  +   +
Sbjct: 636 GEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAY 695

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             LI  FCR    ++A  +LK + + G       Y  +I G C+S  V  A+     M++
Sbjct: 696 NNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLN 755

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               P+   ++ ++  +   G+  E  +L+ K+ E
Sbjct: 756 EGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKE 790



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 111/448 (24%), Positives = 216/448 (48%), Gaps = 7/448 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + I+  +  +G L +A  ++  M  +N IP+ +    LI G  +  + E A+ +   M
Sbjct: 415 TYSSIINGYTKKGILDEAINVMKKMLDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEM 474

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +SG   + + ++++V  L +  ++  A  LL +++  G   D + Y +++   F  GK 
Sbjct: 475 KLSGLKVNNVLFDVLVNNLKRGKRMDEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKE 534

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+   ++   K  P  ++TY +LI  + +  G   A  V   M   G +P+  TYN +
Sbjct: 535 SAALNMVEEMTEKSIPFDVVTYNVLINGLLEH-GKYEAKSVYSGMIEMGLAPNQATYNIM 593

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CKQG+ D+A+ + N + S  + P+SIT NTL+  L   G    ++K ++++NE S 
Sbjct: 594 IKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEAG---EIEKAMNVLNEMSV 650

Query: 359 ---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P +  + +L+N   K G  +  +    Q+V    + +   YN ++   C+  M  +
Sbjct: 651 MGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKK 710

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  +L  +         +TYN LI G  +   ++KA+  Y QM+  G+SP+ +T+  L+ 
Sbjct: 711 ATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLG 770

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G   A  + E  +L  ++ + G     S Y  +I G  K      +I++   M++  + P
Sbjct: 771 GLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVP 830

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             + ++ ++   A  G  ++A +L  ++
Sbjct: 831 KTSTYNVLISDFAKVGKMDQARELLNEM 858



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 217/459 (47%), Gaps = 7/459 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G +     L+  M  ++  P+     ++I G  +   +++A  V++ M
Sbjct: 380 TYTALIDGYCKVGDMERVESLLQEMEEKHINPNVITYSSIINGYTKKGILDEAINVMKKM 439

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +    +P+   Y +++ G CK G+   A  L +EM +SG + + + ++ ++  +    + 
Sbjct: 440 LDQNIIPNAYVYAILIDGYCKAGKQEIATDLYNEMKLSGLKVNNVLFDVLVNNLKRGKRM 499

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A    KD   +G     + YT L++   K    + A+ ++++M  +    D+VTYN L
Sbjct: 500 DEAEELLKDVTSRGLLLDHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVL 559

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE-AS 357
           +N   + GKY+ A  V + ++  G+ PN  TYN ++ +   +G    +D  L++ NE  S
Sbjct: 560 INGLLEHGKYE-AKSVYSGMIEMGLAPNQATYNIMIKAYCKQG---ELDNALELWNEMKS 615

Query: 358 HS--PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           H   P+  T N L+ GL + G +++A+N  N+M      P++V +  +L A  K G  N 
Sbjct: 616 HKIMPSSITCNTLVVGLSEAGEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANA 675

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            LQ+   L           YN LI    +    +KA  +   M+ +G   D +T+  LI 
Sbjct: 676 VLQMHEQLVDMGLKINQEAYNNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIR 735

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+C +  V++A+    ++   G       Y L++ GL  +  +    ++ + M  +   P
Sbjct: 736 GYCESSHVKKALATYTQMLNEGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNP 795

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           D + + T++      G  +E+ +L+ +++      K +T
Sbjct: 796 DASTYDTLISGYGKIGNKKESIRLYCEMVAQGFVPKTST 834



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 184/431 (42%), Gaps = 48/431 (11%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D      ++  F   GK + A  +++ M  ++   D      LI GL+   + E A  V 
Sbjct: 517 DHVNYTSLMDGFFKAGKESAALNMVEEMTEKSIPFDVVTYNVLINGLLEHGKYE-AKSVY 575

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+  TYN+M+   CK+G++ +A+ L +EM      P  IT NT++  + + 
Sbjct: 576 SGMIEMGLAPNQATYNIMIKAYCKQGELDNALELWNEMKSHKIMPSSITCNTLVVGLSEA 635

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILI----------------EQV------------ 267
           G+ ++A+    +    G  P L+ + +L+                EQ+            
Sbjct: 636 GEIEKAMNVLNEMSVMGIHPNLVIHRVLLNASSKSGKANAVLQMHEQLVDMGLKINQEAY 695

Query: 268 -------CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
                  C+     +A  VL  M  +G   D VTYN+L+   C+      A+     +L+
Sbjct: 696 NNLIVVFCRLRMTKKATSVLKYMIRDGFVADTVTYNALIRGYCESSHVKKALATYTQMLN 755

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G+ PN +TYN LL  L   G     D++ D M E   +P   TY+ LI+G  K G    
Sbjct: 756 EGVSPNIVTYNLLLGGLLGAGLMAERDELFDKMKENGLNPDASTYDTLISGYGKIGNKKE 815

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI- 439
           +I  + +MV++   P   TYN ++    K G +++A +LL+ +      P   TY+ LI 
Sbjct: 816 SIRLYCEMVAQGFVPKTSTYNVLISDFAKVGKMDQARELLNEMQVRGVPPSSSTYDILIC 875

Query: 440 -----------DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
                      D   KK     A  L  +M + G  P   T   +   F R  ++ +A  
Sbjct: 876 GWCNLSKHPDLDRTLKKIYRTDAKNLITEMNDKGFVPCKSTIACISSTFARPGKMLDAEK 935

Query: 489 LLKEIGKRGNK 499
           LLKEI    NK
Sbjct: 936 LLKEIFSHANK 946



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 93/379 (24%), Positives = 175/379 (46%), Gaps = 24/379 (6%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P ++ +N ++      G   Q    + + L    PP + T+ +L+   CK   +  A+++
Sbjct: 8   PTLLLWNQLIYHFNAFGLVSQVCDIYTEMLCSAVPPNVYTHNVLVHAWCKMGNLILALDL 67

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L ++ +E    D VTYN+++   C+ G  + A   ++ ++ +    ++IT N L+     
Sbjct: 68  LRNVDVE---VDTVTYNTVIWGFCQHGLVNQAFGFLSIMVKKDTCFDTITCNILVKGFCR 124

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G     ++I+D +        V  +N LI+G CK G +  A++   +M  +    DIV+
Sbjct: 125 IGLAKYGERIMDNLVSGGTCKDVIGFNTLIDGYCKAGEMSLALDLVERMRKEGLLSDIVS 184

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGS---------------------SCSPCLITYNTL 438
           YNT++   CK G  ++A  LLH ++ S                     +    LITY T+
Sbjct: 185 YNTLINGFCKRGEYDKAKSLLHEISESRGVKDSVFFNIDDRIKKDDNLNLEADLITYTTI 244

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I    K+  +E+A  LY +M+ NG  PD +T+ +++ G C+  ++ EA +LL+E+ K G 
Sbjct: 245 ISTYCKQHGLEEARALYEEMIINGFLPDVVTYSSIVNGLCKDGRLSEAQELLREMKKMGV 304

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
              + AY  +I  L K+     A      ++      D  + +T+V  +      +EA  
Sbjct: 305 DPNHVAYTTLIDSLFKAGSAWEAFACQSQLVVRGMTLDLVMCTTLVDGLFKSSKPKEAED 364

Query: 559 LWQKLIEWKVFEKGTTLLA 577
           +++ L +  +     T  A
Sbjct: 365 MFRALSKLNLIPNSITYTA 383


>gi|115446101|ref|NP_001046830.1| Os02g0470000 [Oryza sativa Japonica Group]
 gi|47497415|dbj|BAD19472.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|47497530|dbj|BAD19582.1| putative PPR protein [Oryza sativa Japonica Group]
 gi|113536361|dbj|BAF08744.1| Os02g0470000 [Oryza sativa Japonica Group]
          Length = 649

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 129/489 (26%), Positives = 240/489 (49%), Gaps = 44/489 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G+L DA +LI  M      PD +    +++GL    + E+A +++  M
Sbjct: 160 TYTALIDGYCRSGRLDDALRLIASMP---VAPDTYTYNTVLKGLCIAKKWEEAEELMAEM 216

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +   P+ +T+   +   C+ G +  A+ LLD+M   GC PDV+ Y+T++    + G  
Sbjct: 217 IRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHV 276

Query: 239 KQAIGF-------------------------WKD-------QLRKGCPPYLITYTILIEQ 266
            QA+                           W+D        +RKGC P   T+++LI  
Sbjct: 277 DQALDLLNTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISS 336

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +C+   +  A+EVL+ M   GC PD V YN ++N   ++G+ DDA+ ++N+++ +   P+
Sbjct: 337 LCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMVCK---PD 393

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           ++ +N +L        W    +++  M          T+NILI+ LC+ GLV+ A   F 
Sbjct: 394 ALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFE 453

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           QM    C PDIVTY+++L    ++G++  A+QL   +    C P + +YN ++ GL +  
Sbjct: 454 QMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSM---PCKPDIFSYNAVLKGLCRAA 510

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
             E A  L  +M+     P+++T   LI   C+   V+ A+++L+++   G+      Y 
Sbjct: 511 RWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYN 570

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            +I+G  +  ++D A+++L  M     KPD   +++ +K +      ++A +L  +++  
Sbjct: 571 ALINGFSEQGRLDDALKLLSTMSC---KPDAISYNSTLKGLCRAERWQDAEELVAEMLRN 627

Query: 567 KVFEKGTTL 575
           K      T 
Sbjct: 628 KCTPNEVTF 636



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/475 (26%), Positives = 237/475 (49%), Gaps = 43/475 (9%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++  C+  +L DA +++D +              L+ G  R  R+  A +VL     
Sbjct: 94  NILIKKLCATRRLADAERVLDALKAAAAADAVSH-NTLVAGYCRDGRLADAERVLGAARA 152

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G   + +TY  ++ G C+ G++  A+ L+  M V+   PD  TYNT+L+ +    K+++
Sbjct: 153 TGAA-NVVTYTALIDGYCRSGRLDDALRLIASMPVA---PDTYTYNTVLKGLCIAKKWEE 208

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     + +R  CPP  +T+   I   C+   + RA+++LD M   GC+PD+V Y++L+N
Sbjct: 209 AEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLIN 268

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +QG  D A+ ++N +L +   PN++ YN  L  L     W+ + +++  M     SP
Sbjct: 269 GFSEQGHVDQALDLLNTMLCK---PNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSP 325

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+++LI+ LC+  LVD A+    QM    C+PD V YN ++ +L + G +++AL+LL
Sbjct: 326 NEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLL 385

Query: 421 H-------------LLNG-------------------SSCSPCLITYNTLIDGLAKKGCM 448
           +             +L G                     C    +T+N LID L + G +
Sbjct: 386 NSMVCKPDALGFNAVLKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLV 445

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
             A  ++ QM     +PD +T+ +L+ GF     VE A+ L + +  + +     +Y  V
Sbjct: 446 NYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMPCKPDIF---SYNAV 502

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + GLC++ + + A +++  M+     P++  F+ ++  +   G+ + A ++ +++
Sbjct: 503 LKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQM 557



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 185/351 (52%), Gaps = 9/351 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  L+  C   +  D  +L+  M R+   P+      LI  L + + ++ A +VL+ M  
Sbjct: 296 NAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEK 355

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PDT+ YN+++  L +RG++  A+ LL+ M    C+PD + +N +L+      ++  
Sbjct: 356 YGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHD 412

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A        R  CP   +T+ ILI+ +C+   +  A +V + M    C+PDIVTY+SL+N
Sbjct: 413 ASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLN 472

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +QG  + A+ +  ++  +   P+  +YN +L  L     W+   +++  M      P
Sbjct: 473 GFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPP 529

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+NILIN LC+ GLVDRAI    QM +    PDI TYN ++    ++G L++AL+LL
Sbjct: 530 NEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLL 589

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             +   SC P  I+YN+ + GL +    + A  L  +M+ N  +P+++T +
Sbjct: 590 STM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFK 637



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 83/307 (27%), Positives = 163/307 (53%), Gaps = 8/307 (2%)

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           I+  ILI+++C    +A A E + D      + D V++N+LV   C+ G+  DA  V+  
Sbjct: 91  ISCNILIKKLCATRRLADA-ERVLDALKAAAAADAVSHNTLVAGYCRDGRLADAERVLGA 149

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
             + G   N +TY  L+      G    +D  L ++     +P  +TYN ++ GLC    
Sbjct: 150 ARATGAA-NVVTYTALIDGYCRSG---RLDDALRLIASMPVAPDTYTYNTVLKGLCIAKK 205

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            + A     +M+   C P+ VT+ T + + C+ G+L+ A+QLL  +    C+P ++ Y+T
Sbjct: 206 WEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYST 265

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+G +++G +++A+ L   M+     P+ + +   + G C A++ E+  +L+ E+ ++G
Sbjct: 266 LINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKG 322

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                + + ++I  LC++  VD A++VLE M     +PD   ++ I+  +++ G  ++A 
Sbjct: 323 CSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDAL 382

Query: 558 KLWQKLI 564
           +L   ++
Sbjct: 383 RLLNSMV 389



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 37/250 (14%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMV 179
           N +L+ FC   +  DAS+LI  M R +  P      N LI  L +   +  A++V + M 
Sbjct: 398 NAVLKGFCRAERWHDASELIAQMFR-DDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 456

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
                PD +TY+ ++ G  ++G +  AI L   M    C+PD+ +YN +L+ +    +++
Sbjct: 457 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWE 513

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG------------ 287
            A     + + K CPP  +T+ ILI  +C++  + RAIEVL+ M   G            
Sbjct: 514 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 573

Query: 288 --------------------CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                               C PD ++YNS +   C+  ++ DA  ++  +L     PN 
Sbjct: 574 NGFSEQGRLDDALKLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNE 633

Query: 328 ITYNTLLHSL 337
           +T+    H L
Sbjct: 634 VTFKYANHLL 643


>gi|224126843|ref|XP_002319940.1| predicted protein [Populus trichocarpa]
 gi|222858316|gb|EEE95863.1| predicted protein [Populus trichocarpa]
          Length = 555

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 118/416 (28%), Positives = 213/416 (51%), Gaps = 35/416 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T + ++  FC  GK+  A +L D+M  R   P+ H    +I+GL R+ +  +  
Sbjct: 157 LEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGYKPNVHSYSIIIKGLCRVGKTTEVI 216

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L+ M + G  PD + YN +V  LCK   +  A+ +  +M  +G  P V+TY +++  +
Sbjct: 217 KLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVHIFCKMKGTGILPTVVTYTSLIHGL 276

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            + G++K+A G   +       P L+ +++LI+ +CK+  ++ A  +L  M   G  PD+
Sbjct: 277 RNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMCKEGEVSEARVILKTMTEMGVEPDV 336

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN+L+N  C + +  +A  V   ++S+G  P+                          
Sbjct: 337 ATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPD-------------------------- 370

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
                    VF+++IL+NG CK   +D A   F++M  +   PD V+YNT++  LC+   
Sbjct: 371 ---------VFSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARR 421

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             EA +L   ++ +   P L+TY+ L+D L+K+G +++AM L+  M  +G+ PD +T+  
Sbjct: 422 PLEAEELFKDMHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNI 481

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           +I G C+  + ++A +L  E+  +G +  N      I G+CK   +D A +    M
Sbjct: 482 MIDGMCKYGKFKDARELFAELSVKGLQPNNWVCTPTIDGVCKGGLLDEAHKAFRQM 537



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 218/431 (50%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           + DA    + M   N +P       L   L+R+   +    + + M M+G   D ++  +
Sbjct: 72  INDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTI 131

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++   C+   +    ++L ++   G EP+VIT++T++      GK  +AI  +   + +G
Sbjct: 132 LINCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARG 191

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P + +Y+I+I+ +C+       I++L+ M + GC PD+V YN++V+  CK    ++AV
Sbjct: 192 YKPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAV 251

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            +   +   G+ P  +TY +L+H L + G W     +L+ M   +  P +  +++LI+ +
Sbjct: 252 HIFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIM 311

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G V  A      M     +PD+ TYNT++   C    + EA ++  ++      P +
Sbjct: 312 CKEGEVSEARVILKTMTEMGVEPDVATYNTLMNGYCLRMEVVEARKVFEVMISKGRMPDV 371

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
            +++ L++G  K   +++A  L+ +M   G+ PD +++ TLI G C+A +  EA +L K+
Sbjct: 372 FSFSILVNGYCKAKRIDEAKQLFDEMTHRGLIPDTVSYNTLISGLCQARRPLEAEELFKD 431

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +   G       Y +++  L K   +D A+ +   M +S  KPD   ++ ++  +   G 
Sbjct: 432 MHSNGYPPNLVTYSILLDCLSKQGYLDQAMGLFRAMENSGLKPDLVTYNIMIDGMCKYGK 491

Query: 553 TEEAYKLWQKL 563
            ++A +L+ +L
Sbjct: 492 FKDARELFAEL 502



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 61/260 (23%), Positives = 117/260 (45%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           +DA+   N++++    P+ + +  L  +L     +  V  +   M  A  S  V +  IL
Sbjct: 73  NDALSAFNHMVNTNPLPSIVKFGELFSALVRMKHYKTVVSLSKQMEMAGISHDVLSLTIL 132

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN  C+   VD   +   +++    +P+++T++T++   C EG +  A++L  ++     
Sbjct: 133 INCFCRLCHVDYGFSVLGKIIKLGLEPNVITFSTLINGFCIEGKIGRAIELFDVMVARGY 192

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P + +Y+ +I GL + G   + + L   M   G  PD + + T++   C+   V EAV 
Sbjct: 193 KPNVHSYSIIIKGLCRVGKTTEVIKLLEHMKVVGCEPDVVIYNTIVDRLCKDRLVNEAVH 252

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           +  ++   G       Y  +IHGL    +   A  +L  M      PD   FS ++  + 
Sbjct: 253 IFCKMKGTGILPTVVTYTSLIHGLRNLGRWKEAFGLLNEMKGGNIMPDLVAFSVLIDIMC 312

Query: 549 DDGMTEEAYKLWQKLIEWKV 568
            +G   EA  + + + E  V
Sbjct: 313 KEGEVSEARVILKTMTEMGV 332


>gi|357130476|ref|XP_003566874.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Brachypodium distachyon]
          Length = 810

 Score =  202 bits (515), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 216/444 (48%), Gaps = 1/444 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G    A +L   M  +  +P       +++GL+   R + A  + + M  SG +PD  TY
Sbjct: 346 GMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWKDAVCLFEEMADSG-LPDVFTY 404

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N ++   C+  ++R A+ L D M  +G +P + TYN++L      G   +A+  + +   
Sbjct: 405 NNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLYSEMPM 464

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           +G  P ++TY  L+     +     A  +LD+M   G S +  TYN L+N  C   +  +
Sbjct: 465 EGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMVDRVCE 524

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
              ++ + +S G  P  +TYN++++     G   +   +   M E    P + TY   I+
Sbjct: 525 VDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITYTSFID 584

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G C+ G  D A+   N +  +  QPDIV YN ++   C+EG ++ ALQLL +L     +P
Sbjct: 585 GYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLKDGLAP 644

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             + YN+LI G      M++    Y  M++ GI  D  T+ TLI GF +   V  A++L 
Sbjct: 645 NTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAFALELY 704

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+  +G       +  + HGLC+S  +D A ++LE M     +P+  +++ ++     D
Sbjct: 705 SEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLINGYLRD 764

Query: 551 GMTEEAYKLWQKLIEWKVFEKGTT 574
              +EA++L  +++   +    TT
Sbjct: 765 CKLQEAFRLHDEMLNMGIQPDDTT 788



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/371 (29%), Positives = 183/371 (49%), Gaps = 1/371 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L  +C +G + +A KL   M      P+    I L+RG I     + A  +L  M
Sbjct: 438 TYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEM 497

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G   +  TYN+++ G+C   ++     +L      G  P ++TYN+I+      G  
Sbjct: 498 KQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMM 557

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   ++    KG PP +ITYT  I+  C+      A+++L+D+   G  PDIV YN+L
Sbjct: 558 GSAFTVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNAL 617

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C++G    A+ ++  LL  G+ PN++ YN+L+    +      V K  + M +   
Sbjct: 618 INGFCQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGI 677

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TY  LI+G  K G V  A+  +++M++K   PD  T+  +   LC+ G ++ A +
Sbjct: 678 VADTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKK 737

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW-GF 477
           LL  +      P +  YN LI+G  +   +++A  L+ +M+  GI PDD T+  L+   F
Sbjct: 738 LLEEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKF 797

Query: 478 CRADQVEEAVD 488
             AD   + ++
Sbjct: 798 LEADNCADVLN 808



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/480 (25%), Positives = 218/480 (45%), Gaps = 38/480 (7%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G   DA +L D M      PD       I  L ++    +A ++L+ M   G      TY
Sbjct: 206 GMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKEVGFDTCDFTY 265

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
             MV  L K G++  A+ + DEM  +G + DVI   T++R      +   A+  +K+ L+
Sbjct: 266 RTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLRQEVGNALNLFKETLK 325

Query: 251 KGCPPYLITYTILIEQVCKQCGIAR----------------------------------- 275
            G  P  + Y +LI   C Q G+ +                                   
Sbjct: 326 DGIVPTKVMYGVLIRG-CDQVGMTQKAYELCRQMTGQGLLPSTFELSLVLKGLLNDRRWK 384

Query: 276 -AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+ + ++MA  G  PD+ TYN+L+++ C+  K  +A+ + + +   G++P+  TYN+LL
Sbjct: 385 DAVCLFEEMADSGL-PDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLL 443

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                +GC D   K+   M      P V TY  L+ G       D A    ++M      
Sbjct: 444 MGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVS 503

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            +  TYN ++  +C    + E   +L         P ++TYN++I+G  K G M  A  +
Sbjct: 504 CNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTV 563

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y QM E G+ P+ IT+ + I G+CR    + A+ +L ++ +RG +    AY  +I+G C+
Sbjct: 564 YQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQ 623

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
              +  A+Q+L +++     P+  V+++++    +  M +E  K ++ +I+  +    +T
Sbjct: 624 EGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTST 683



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 182/394 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C   KL +A  L D M +    P  +   +L+ G  +   +++A K+ 
Sbjct: 400 DVFTYNNLIHWHCQAHKLREALNLFDRMKKAGVKPSINTYNSLLMGYCKKGCMDEAVKLY 459

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M M G  P+ +TY  ++ G   +    +A ALLDEM  +G   +  TYN ++  +   
Sbjct: 460 SEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYALLDEMKQNGVSCNDYTYNVLINGICMV 519

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +  G  K  + +G  P ++TY  +I    K   +  A  V   M  +G  P+I+TY
Sbjct: 520 DRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAFTVYQQMREKGLPPNIITY 579

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            S ++  C+ G  D A+ ++N++  RG++P+ + YN L++     G      ++L I+ +
Sbjct: 580 TSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGFCQEGNMSHALQLLVILLK 639

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P    YN LI G     ++      +  M+      D  TY T++    K+G +  
Sbjct: 640 DGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADTSTYTTLIDGFSKDGNVAF 699

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL+L   +      P   T+  L  GL + G ++ A  L  +M    + P+   +  LI 
Sbjct: 700 ALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEEMRRLDVRPNVFIYNMLIN 759

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           G+ R  +++EA  L  E+   G +  ++ Y +++
Sbjct: 760 GYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 103/437 (23%), Positives = 184/437 (42%), Gaps = 40/437 (9%)

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           D    A+     MV  G VPD  +   ++    +    + A+AL  EM   G   D   +
Sbjct: 136 DLPSAATDTYAHMVARGVVPDIKSRTDLLIRTARGSSAKDALALFMEMRGRGYRVDAWMF 195

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           + ++      G  + A+  + +       P    Y + I  +CK     RA+ +L +M  
Sbjct: 196 DALMSACLKEGMHEDAVRLFDEMPGAEIDPDQRVYALAITALCKLGDGGRALRMLREMKE 255

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
            G      TY ++V+   K G+ ++A+ V + +   G + + I   TL+     R     
Sbjct: 256 VGFDTCDFTYRTMVDVLVKTGRMEEALRVNDEMRDAGKKMDVIVATTLMRGYCLR---QE 312

Query: 346 VDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQM-------------- 388
           V   L++  E       PT   Y +LI G  + G+  +A     QM              
Sbjct: 313 VGNALNLFKETLKDGIVPTKVMYGVLIRGCDQVGMTQKAYELCRQMTGQGLLPSTFELSL 372

Query: 389 --------------------VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
                               ++ +  PD+ TYN ++   C+   L EAL L   +  +  
Sbjct: 373 VLKGLLNDRRWKDAVCLFEEMADSGLPDVFTYNNLIHWHCQAHKLREALNLFDRMKKAGV 432

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P + TYN+L+ G  KKGCM++A+ LY +M   G  P+ +T+ TL+ G+      + A  
Sbjct: 433 KPSINTYNSLLMGYCKKGCMDEAVKLYSEMPMEGFKPNVVTYITLMRGYIAKKDFDNAYA 492

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           LL E+ + G    +  Y ++I+G+C   +V     +L+  +S  + P    +++I+    
Sbjct: 493 LLDEMKQNGVSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFV 552

Query: 549 DDGMTEEAYKLWQKLIE 565
             GM   A+ ++Q++ E
Sbjct: 553 KAGMMGSAFTVYQQMRE 569



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 71/292 (24%), Positives = 129/292 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  ++ T N ++   C   ++ +   ++        IP      ++I G ++   +  A 
Sbjct: 502 VSCNDYTYNVLINGICMVDRVCEVDGMLKSFMSEGFIPTMMTYNSIINGFVKAGMMGSAF 561

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V Q M   G  P+ ITY   + G C+ G    A+ +L+++   G +PD++ YN ++   
Sbjct: 562 TVYQQMREKGLPPNIITYTSFIDGYCRTGCSDMALKMLNDVRRRGLQPDIVAYNALINGF 621

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+      L+ G  P  + Y  LI        +    +  + M   G   D 
Sbjct: 622 CQEGNMSHALQLLVILLKDGLAPNTVVYNSLITGYKNLNMMKEVSKFYESMIKGGIVADT 681

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY +L++   K G    A+ + + ++++G  P++ T+  L H L   G  D   K+L+ 
Sbjct: 682 STYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLLEE 741

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
           M      P VF YN+LING  +   +  A    ++M++   QPD  TY+ ++
Sbjct: 742 MRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILV 793



 Score = 56.6 bits (135), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 35/118 (29%), Positives = 54/118 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  F   G +  A +L   M  +  IPD      L  GL R   I+ A K+L
Sbjct: 680 DTSTYTTLIDGFSKDGNVAFALELYSEMMAKGYIPDAFTFTALTHGLCRSGDIDGAKKLL 739

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + M      P+   YNM++ G  +  +++ A  L DEM   G +PD  TY+ ++   F
Sbjct: 740 EEMRRLDVRPNVFIYNMLINGYLRDCKLQEAFRLHDEMLNMGIQPDDTTYDILVSKKF 797


>gi|359481971|ref|XP_003632699.1| PREDICTED: pentatricopeptide repeat-containing protein At5g12100,
           mitochondrial-like [Vitis vinifera]
          Length = 819

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 126/448 (28%), Positives = 215/448 (47%), Gaps = 1/448 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C   ++ DA KL D M  R   P+      LI G  ++ ++E+A  + + M +
Sbjct: 221 NVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKV 280

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P  IT+N ++ GLC+   +  A  +L+EM V G  PD  TY T+       G    
Sbjct: 281 ENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFDGHLKCGNVDA 340

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           +I   ++ +RKG      T +IL+  +CK+  + +A EVL      G +P  V +N++VN
Sbjct: 341 SITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVN 400

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ G  + A   I  + + G+ PN +TYN+L+         +  +K +  M E    P
Sbjct: 401 GYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLP 460

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN LI+G  +  L DR      +M  K  +P++++Y  ++  LCK+  + EA  +L
Sbjct: 461 NVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVIL 520

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P    YN LIDG    G ++ A   + +M+   I P  +T+  LI G C+ 
Sbjct: 521 GDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGLCKK 580

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +V EA +L  EI ++G       Y  +I G   +  V  A+++ E M  S  KP    +
Sbjct: 581 GKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTLNTY 640

Query: 541 STIVKKVADDGMTEEAYKLWQKLIEWKV 568
             ++     +G+     K++Q++++  +
Sbjct: 641 HRLIAGCGKEGLV-LVEKIYQEMLQMNL 667



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/458 (27%), Positives = 217/458 (47%), Gaps = 37/458 (8%)

Query: 135 DASKLIDIMARRN--QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           DAS  +   A R   QI D+  C  L+  L +   +EKA +VL+  + +G  P  + +N 
Sbjct: 339 DASITLSEEAVRKGVQILDYT-CSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNT 397

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           +V G C+ G I  A   +++M   G  P+ +TYN++++   +    ++A    K  + KG
Sbjct: 398 IVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKG 457

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P + TY  LI+   + C   R  ++L++M  +G  P++++Y  L+N  CK     +A 
Sbjct: 458 VLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAE 517

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
           +++ +++ RG+ PN+  YN L+      G      +  D M      PT+ TYNILINGL
Sbjct: 518 VILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTYNILINGL 577

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G V  A N  +++  K    D++TYN+++      G + +AL+L   +  S   P L
Sbjct: 578 CKKGKVMEAENLASEITRKGLSFDVITYNSLISGYSSAGNVQKALELYETMKKSGIKPTL 637

Query: 433 ITYNTLIDGLAKKGCM----------------------------------EKAMVLYGQM 458
            TY+ LI G  K+G +                                  +KA  L+  M
Sbjct: 638 NTYHRLIAGCGKEGLVLVEKIYQEMLQMNLVPDRVIYNALIHCYVEHGDVQKACSLHSAM 697

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
              GI PD +T+  LI G  +  ++ +  +L+ ++  RG   +   Y ++I G CK K  
Sbjct: 698 EAQGIQPDKMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDF 757

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           D A      M  + + P  ++   ++  + ++G + +A
Sbjct: 758 DGAYVWYREMFENGFTPSVSICDNLITGLREEGRSHDA 795



 Score =  175 bits (444), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 107/443 (24%), Positives = 213/443 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  L++  S  +  D  +L   +      PD       I+  +++  +++A +++  M  
Sbjct: 151 NLFLESLVSTKRYEDTLQLFSEIVESGLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKR 210

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P    YN+++GGLCK  +++ A  L DEM      P+ ITYNT++      G+ ++
Sbjct: 211 GGVSPGVFVYNVVIGGLCKEKRMKDAEKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEE 270

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    +    +   P +IT+  L+  +C+   +  A  VL++M + G  PD  TY +L +
Sbjct: 271 AFNIRERMKVENVEPTIITFNSLLNGLCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFD 330

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G  D ++ +    + +G++    T + LL++L   G  +  +++L    E   +P
Sbjct: 331 GHLKCGNVDASITLSEEAVRKGVQILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAP 390

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
               +N ++NG C+ G +++A  +  +M +   +P+ VTYN+++   C+   + EA + +
Sbjct: 391 VGVFFNTIVNGYCQVGDINKAYTTIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCI 450

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P + TYNTLIDG  +    ++   +  +M + G+ P+ I++  LI   C+ 
Sbjct: 451 KKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKD 510

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             + EA  +L ++  RG       Y ++I G C + K+  A +  + M++    P    +
Sbjct: 511 ANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKLKDAFRFFDEMVAREIVPTLVTY 570

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++  +   G   EA  L  ++
Sbjct: 571 NILINGLCKKGKVMEAENLASEI 593



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 114/450 (25%), Positives = 213/450 (47%), Gaps = 7/450 (1%)

Query: 123 ILQNFCSRGKL-TDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +L + CS  K+ +++++L  +M +   +P        +  L+   R E   ++   +V S
Sbjct: 117 MLLSICSESKMVSESAELYMLMKKDGVLPSVASLNLFLESLVSTKRYEDTLQLFSEIVES 176

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD   Y   +    K G ++ AI L+  M   G  P V  YN ++  +    + K A
Sbjct: 177 GLRPDQFMYGKAIQAAVKLGDLKRAIELMTCMKRGGVSPGVFVYNVVIGGLCKEKRMKDA 236

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              + + L +   P  ITY  LI+  CK   +  A  + + M +E   P I+T+NSL+N 
Sbjct: 237 EKLFDEMLDRRVAPNRITYNTLIDGYCKVGQLEEAFNIRERMKVENVEPTIITFNSLLNG 296

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+    ++A  V+  +   G  P+  TY TL    G   C + VD  + +  EA     
Sbjct: 297 LCRAQMMEEAQRVLEEMEVYGFVPDRFTYTTLFD--GHLKCGN-VDASITLSEEAVRKGV 353

Query: 362 V---FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
               +T +IL+N LCK G +++A     + +     P  V +NT++   C+ G +N+A  
Sbjct: 354 QILDYTCSILLNALCKEGNMEKAEEVLKKFLENGLAPVGVFFNTIVNGYCQVGDINKAYT 413

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            +  +      P  +TYN+L+    +   ME+A     +M+E G+ P+  T+ TLI G+ 
Sbjct: 414 TIEKMEAVGLRPNHVTYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYG 473

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R+   +    +L+E+ K+G K    +Y  +I+ LCK   +  A  +L  M+     P+  
Sbjct: 474 RSCLFDRCFQILEEMEKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQ 533

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +++ ++      G  ++A++ + +++  ++
Sbjct: 534 IYNMLIDGSCIAGKLKDAFRFFDEMVAREI 563



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 106/379 (27%), Positives = 180/379 (47%), Gaps = 1/379 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++ FC    + +A K I  M  +  +P+      LI G  R    ++  ++L+ M
Sbjct: 429 TYNSLVKKFCEMKNMEEAEKCIKKMVEKGVLPNVETYNTLIDGYGRSCLFDRCFQILEEM 488

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ I+Y  ++  LCK   I  A  +L +M   G  P+   YN ++      GK 
Sbjct: 489 EKKGLKPNVISYGCLINCLCKDANILEAEVILGDMVHRGVVPNAQIYNMLIDGSCIAGKL 548

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K A  F+ + + +   P L+TY ILI  +CK+  +  A  +  ++  +G S D++TYNSL
Sbjct: 549 KDAFRFFDEMVAREIVPTLVTYNILINGLCKKGKVMEAENLASEITRKGLSFDVITYNSL 608

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++     G    A+ +   +   G++P   TY+ L+   G  G    V+KI   M + + 
Sbjct: 609 ISGYSSAGNVQKALELYETMKKSGIKPTLNTYHRLIAGCGKEGLV-LVEKIYQEMLQMNL 667

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    YN LI+   ++G V +A +  + M ++  QPD +TYN ++    KEG +++   
Sbjct: 668 VPDRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPDKMTYNCLILGHFKEGRMHKVKN 727

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L++ +      P   TY+ LI G  K    + A V Y +M ENG +P       LI G  
Sbjct: 728 LVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYREMFENGFTPSVSICDNLITGLR 787

Query: 479 RADQVEEAVDLLKEIGKRG 497
              +  +A  +  E+  +G
Sbjct: 788 EEGRSHDADVICSEMNMKG 806



 Score = 41.6 bits (96), Expect = 1.3,   Method: Compositional matrix adjust.
 Identities = 35/150 (23%), Positives = 61/150 (40%), Gaps = 4/150 (2%)

Query: 92  RGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD 151
            GL + +K +   L  +  P    D    N ++  +   G +  A  L   M  +   PD
Sbjct: 650 EGLVLVEKIYQEMLQMNLVP----DRVIYNALIHCYVEHGDVQKACSLHSAMEAQGIQPD 705

Query: 152 FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD 211
                 LI G  +  R+ K   ++  M + G +P T TY++++ G CK      A     
Sbjct: 706 KMTYNCLILGHFKEGRMHKVKNLVNDMKIRGLIPKTETYDILIVGHCKLKDFDGAYVWYR 765

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           EM  +G  P V   + ++  + + G+   A
Sbjct: 766 EMFENGFTPSVSICDNLITGLREEGRSHDA 795


>gi|115446945|ref|NP_001047252.1| Os02g0582300 [Oryza sativa Japonica Group]
 gi|50253069|dbj|BAD29317.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536783|dbj|BAF09166.1| Os02g0582300 [Oryza sativa Japonica Group]
          Length = 845

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 122/456 (26%), Positives = 217/456 (47%), Gaps = 13/456 (2%)

Query: 101 HDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIR 160
           H P  P++          T N ++++ C R  L  A + + +M R    PD +   +LI 
Sbjct: 146 HAPPAPTA---------PTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIV 196

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
           G  R ++++ A  +   M + G   D ++Y  ++ GLC+ G+I  A+ L  EM     +P
Sbjct: 197 GYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAVELFGEMD----QP 252

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D+  Y  +++ + +  + ++ +   +     G  P    Y  +++  C++     A E+L
Sbjct: 253 DMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEML 312

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
            +M  +G +P +VT  +++N  CK+G+  DA+ V+  +  RG +PN  TYN L+    + 
Sbjct: 313 QEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNE 372

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G       +L+ M     +P   TYN+LI G C  G ++ A      M       D  TY
Sbjct: 373 GKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTY 432

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N ++ ALCK+G  ++A  L   L      P  +T+N+LI+GL K G  + A     +M+ 
Sbjct: 433 NALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVS 492

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G +PD  T+ + I   C+    +E +  + E+ ++  K     Y +VIH L K +   +
Sbjct: 493 AGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGL 552

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
             +    M+SS   PD   ++T ++    +G   EA
Sbjct: 553 VARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 588



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 203/441 (46%), Gaps = 53/441 (12%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G+++DA +++++M  R   P+      L++G     ++ KA  +L  M
Sbjct: 326 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 385

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD +TYN+++ G C  G I SA  LL  M   G   D  TYN ++  +  +G+ 
Sbjct: 386 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 445

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA   +     +G  P  +T+  LI  +CK      A + L+ M   GC+PD  TY+S 
Sbjct: 446 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSF 505

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK     + +  I  +L + ++P+++ Y  ++H            K+L   N    
Sbjct: 506 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH------------KLLKERN---- 549

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                           YGLV R   ++ +MVS  C PD+VTY T + A C EG LNEA  
Sbjct: 550 ----------------YGLVAR---TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 590

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  ++ +  +   + YNTL+DG A  G  + A+ +  QM      P+  T+  L+    
Sbjct: 591 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 650

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R   VE+ + L                     G+ K+ ++     + ++M  + + P+  
Sbjct: 651 RMRLVEDVLPLTPA------------------GVWKAIELTDVFGLFDVMKKNEFLPNSG 692

Query: 539 VFSTIVKKVADDGMTEEAYKL 559
            +S+I++  ++DG TEEA  L
Sbjct: 693 TYSSILEGFSEDGRTEEATSL 713



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 215/483 (44%), Gaps = 52/483 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++Q FC+ GK+  A  L++ M      PD      LIRG      IE A ++L++M
Sbjct: 361 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 420

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G + D  TYN ++  LCK G+   A +L D +   G +P+ +T+N+++  +  +GK 
Sbjct: 421 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 480

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCK----QCGIARAIEVLD------------- 281
             A  F +  +  GC P   TY+  IE +CK    Q G++   E+L              
Sbjct: 481 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 540

Query: 282 ------------------DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
                             +M   GC+PD+VTY + +   C +G+ ++A  V+  +   G+
Sbjct: 541 IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV 600

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD---- 379
             +++ YNTL+    S G  D    IL  M   +  P  FTY IL+  L +  LV+    
Sbjct: 601 TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLP 660

Query: 380 -------RAIN------SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
                  +AI        F+ M      P+  TY+++L    ++G   EA  L+ L+   
Sbjct: 661 LTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKED 720

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           S S     Y  L+    K      A VL   M+++G  P  ++++ L+ G     Q ++A
Sbjct: 721 SISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKA 780

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            ++      +        ++++I GL K    D++ +++ ++     +P    ++ + ++
Sbjct: 781 KEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEE 840

Query: 547 VAD 549
           + D
Sbjct: 841 LPD 843



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 93/345 (26%), Positives = 165/345 (47%), Gaps = 4/345 (1%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P   TYN ++R++       +A+ +    +R G  P   T+  LI   C+   +  A ++
Sbjct: 151 PTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDL 210

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
            D M + G + D+V+Y +L+   C+ G+ D+AV     L     +P+   Y  L+  L +
Sbjct: 211 FDKMPLRGFAQDVVSYATLIEGLCEAGRIDEAV----ELFGEMDQPDMHMYAALVKGLCN 266

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
               +    +L  M E    P+   Y  +++  C+      A     +M  K   P +VT
Sbjct: 267 AERGEEGLLMLRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVT 326

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
              V+ A CKEG +++AL++L L+    C P + TYN L+ G   +G + KAM L  +M 
Sbjct: 327 CTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMR 386

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
             G++PD +T+  LI G C    +E A  LL+ +   G       Y  +I+ LCK  + D
Sbjct: 387 ACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTD 446

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            A  + + + +   KP+   F++++  +   G  + A+K  +K++
Sbjct: 447 QACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMV 491



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 137/320 (42%), Gaps = 40/320 (12%)

Query: 241 AIGFWKDQLRKGCP-PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           A+  +    R   P P   TY  +I  +C++  +ARA+  L  M   G  PD  T+NSL+
Sbjct: 136 ALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLMVRSGWRPDAYTFNSLI 195

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C+  + D A  + + +  RG   + ++Y T                           
Sbjct: 196 VGYCRTNQVDVARDLFDKMPLRGFAQDVVSYAT--------------------------- 228

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
                   LI GLC+ G +D A+  F +M     QPD+  Y  ++  LC      E L +
Sbjct: 229 --------LIEGLCEAGRIDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLM 276

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +      P    Y  ++D   ++   ++A  +  +M E G++P  +T   +I  +C+
Sbjct: 277 LRRMKELGWRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCK 336

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             ++ +A+ +L+ +  RG K     Y  ++ G C   KV  A+ +L  M +    PD   
Sbjct: 337 EGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVT 396

Query: 540 FSTIVKKVADDGMTEEAYKL 559
           ++ +++    DG  E A++L
Sbjct: 397 YNLLIRGQCIDGHIESAFRL 416



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 57/209 (27%), Positives = 103/209 (49%), Gaps = 10/209 (4%)

Query: 365 YNILINGLCKYGLVDRAINSFNQM-VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           +  L+  L ++ L   A+  F  M       P   TYN V+ +LC+   L  AL+ L L+
Sbjct: 120 FASLLAHLSRFALAPLALRLFAHMHRHAPPAPTAPTYNAVIRSLCRRADLARALRYLSLM 179

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
             S   P   T+N+LI G  +   ++ A  L+ +M   G + D +++ TLI G C A ++
Sbjct: 180 VRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGRI 239

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EAV+L  E+ +    M    Y  ++ GLC +++ +  + +L  M    ++P    ++ +
Sbjct: 240 DEAVELFGEMDQPDMHM----YAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAAV 295

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
           V     +   +EA ++ Q++     FEKG
Sbjct: 296 VDFRCRERKAKEAEEMLQEM-----FEKG 319



 Score = 43.1 bits (100), Expect = 0.36,   Method: Compositional matrix adjust.
 Identities = 53/277 (19%), Positives = 104/277 (37%), Gaps = 52/277 (18%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T    ++ +C  G+L +A  ++  M++     D      L+ G   I + + A  +L
Sbjct: 568 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 627

Query: 176 QIMVMSGGVPDTITYNMMV-----------------GGLCKRGQIRSAIALLDEMSVSGC 218
           + M     VP+  TY +++                  G+ K  ++     L D M  +  
Sbjct: 628 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 687

Query: 219 EPDVITYNTILRTMFDNGKFKQAIG-----------------------FWKDQ------- 248
            P+  TY++IL    ++G+ ++A                         F K +       
Sbjct: 688 LPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWV 747

Query: 249 -----LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
                ++ G  P L++Y  L+  +  +    +A E+  +   +  SPD + +  +++   
Sbjct: 748 LVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLI 807

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           K+G  D +  +I  L      P+  TY  L   L  R
Sbjct: 808 KKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDR 844


>gi|242061532|ref|XP_002452055.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
 gi|241931886|gb|EES05031.1| hypothetical protein SORBIDRAFT_04g017800 [Sorghum bicolor]
          Length = 810

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 137/522 (26%), Positives = 257/522 (49%), Gaps = 44/522 (8%)

Query: 79  SSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           S  + V+  N  + G     + +D     +D PF  N   TN+ +L+  CS  +  DA +
Sbjct: 166 SGSADVVTYNTLVAGYCREGRLNDARRLVADMPFAPNS-YTNSTLLKGLCSNKEWDDAEE 224

Query: 139 LIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           L+  M R    P D  F + +I  L +    ++A  VL  M         I YN ++  L
Sbjct: 225 LLSEMIRSGCPPNDLTFGM-IIHSLCQNGLADRAMGVLDQMSKCRCTRGVIVYNEIISCL 283

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
            + G++  A+ L D+M    C+PD+ +YNT+++ +  +G+++ A       +RK CPP  
Sbjct: 284 AELGRVEEALHLFDQMP---CKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCPPDE 340

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +T+  +I  +C +  +  A+EV++ M   GC PD  TY++LVN   ++G  DDA+ ++  
Sbjct: 341 VTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELLRT 400

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +     +PN++ Y ++L  L     WD V K++  M     +    T+ ++I+ LC+ GL
Sbjct: 401 I---PWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGL 457

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-------------HLLN 424
           VD       +M    C PDI+ YN+++    + G +++AL+L              ++L 
Sbjct: 458 VDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNMSCKRNVVTYNYMLK 517

Query: 425 G-------------------SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           G                     C P  +T++TLI  L +KG +E A+ ++ +M +    P
Sbjct: 518 GLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNCMP 577

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           + I + TLI G    + V++A+ LL ++  + + +    Y   + GLC++++ + A +++
Sbjct: 578 NVIIYSTLINGLSDQECVDDALKLLNDMPCKPDTI---CYSAALKGLCRAERWEDAGELI 634

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
             MI     PD+  FS ++  +   G  E A ++ + +++++
Sbjct: 635 LEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYE 676



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/540 (24%), Positives = 259/540 (47%), Gaps = 54/540 (10%)

Query: 66  CIDRVNEVDQ-----DEWSSESHVLAVNKKLRGLTITKKSHDPS-----LPSSDGPFVEN 115
           C+  +  V++     D+   +  + + N  ++GL    +  D       +   D P    
Sbjct: 282 CLAELGRVEEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGTLIAGMVRKDCP---P 338

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHF-----------CIN------ 157
           DE T N ++   C RG +  A ++++ M +    PD F +           C++      
Sbjct: 339 DEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDDALELL 398

Query: 158 --------------LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
                         +++GL R DR +   K++  M+ +    D +T+ +++  LC++G +
Sbjct: 399 RTIPWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIIDCLCQKGLV 458

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                +L EM+  GC PD+I YN+++    +NG    A+  +K+     C   ++TY  +
Sbjct: 459 DYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM---SCKRNVVTYNYM 515

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           ++ +C+      A +++ +M  + C P+ VT+++L+++ C++G  + A+ V   +     
Sbjct: 516 LKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVFEKMPKYNC 575

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN I Y+TL++ L  + C   VD  L ++N+    P    Y+  + GLC+    + A  
Sbjct: 576 MPNVIIYSTLINGLSDQEC---VDDALKLLNDMPCKPDTICYSAALKGLCRAERWEDAGE 632

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              +M+ KNC PD VT++ ++  LC +G L  A ++  L+    C P +  Y++LI+G A
Sbjct: 633 LILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIYSSLINGFA 692

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           ++   E A+ L   M      PD I +   + G CRA + E+A +L+ E+ ++   +  +
Sbjct: 693 EQYRAEDALQLLRNM---PCEPDTICYSAALKGLCRAKRWEDARELIAEMFRKQCPLDEA 749

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            + ++I  LC++  VDMA +V E M      P+  + S++V   ++    +E  KL   +
Sbjct: 750 TFSMLIGSLCQNGLVDMATEVFEQMSVYGCSPNRKIHSSLVNGYSEQRRVDEGLKLLSSM 809



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 115/443 (25%), Positives = 225/443 (50%), Gaps = 12/443 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N+I+      G++ +A  L D M  +   PD      +++GL R  R E A  ++  MV 
Sbjct: 277 NEIISCLAELGRVEEALHLFDQMPCK---PDIFSYNTVMKGLCRDGRWEDAGTLIAGMVR 333

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PD +T+N ++  LC RG +  A+ ++++M   GC+PD  TY+ ++  + + G    
Sbjct: 334 KDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALSERGCVDD 393

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +    K   P  + Y  +++ +C+        +++ +M     + D VT+  +++
Sbjct: 394 ALELLRTIPWK---PNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEVTFGLIID 450

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C++G  D    V+  +   G  P+ I YN+L++     G   +VD  L++    S   
Sbjct: 451 CLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENG---SVDDALELFKNMSCKR 507

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN ++ GLC+    + A     +MV   C P+ VT++T++  LC++G +  A+++ 
Sbjct: 508 NVVTYNYMLKGLCRAEQWEDAGKLVAEMVKDECLPNEVTFSTLISYLCQKGFVECAIEVF 567

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +   +C P +I Y+TLI+GL+ + C++ A+ L   M      PD I +   + G CRA
Sbjct: 568 EKMPKYNCMPNVIIYSTLINGLSDQECVDDALKLLNDM---PCKPDTICYSAALKGLCRA 624

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           ++ E+A +L+ E+ ++        + ++I+ LC    ++ A +V ELM+     P+  ++
Sbjct: 625 ERWEDAGELILEMIRKNCLPDEVTFSILINNLCHKGFLESATEVSELMLKYECMPNVFIY 684

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           S+++   A+    E+A +L + +
Sbjct: 685 SSLINGFAEQYRAEDALQLLRNM 707



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 112/420 (26%), Positives = 213/420 (50%), Gaps = 12/420 (2%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG-QI 203
           R  + P    C  LI+ L    R++ A +VL       G  D +T N +V G C+ G ++
Sbjct: 95  RDPERPAAVPCTLLIKKLCAAGRLDDAERVLGA-SERAGTADAVTRNTLVAGYCRAGGRL 153

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A  +L  +++SG   DV+TYNT++      G+   A     D       P   T + L
Sbjct: 154 ADAERMLASLALSG-SADVVTYNTLVAGYCREGRLNDARRLVADMPFA---PNSYTNSTL 209

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           ++ +C       A E+L +M   GC P+ +T+  +++  C+ G  D A+ V++ +     
Sbjct: 210 LKGLCSNKEWDDAEELLSEMIRSGCPPNDLTFGMIIHSLCQNGLADRAMGVLDQMSKCRC 269

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
               I YN ++  L   G    V++ L + ++    P +F+YN ++ GLC+ G  + A  
Sbjct: 270 TRGVIVYNEIISCLAELG---RVEEALHLFDQMPCKPDIFSYNTVMKGLCRDGRWEDAGT 326

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               MV K+C PD VT+NTV+  LC  G+++ A++++  +    C P   TY+ L++ L+
Sbjct: 327 LIAGMVRKDCPPDEVTFNTVISYLCHRGLVDCAMEVVEQMPKYGCKPDNFTYSALVNALS 386

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           ++GC++ A+ L   +      P+ + +R+++ G CRAD+ ++   L+ E+ +    +   
Sbjct: 387 ERGCVDDALELLRTI---PWKPNTVCYRSVLKGLCRADRWDDVGKLVAEMIRNQLNLDEV 443

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            + L+I  LC+   VD   +VL  M      PD  ++++++   +++G  ++A +L++ +
Sbjct: 444 TFGLIIDCLCQKGLVDYGAEVLREMTKFGCSPDIIIYNSLINGFSENGSVDDALELFKNM 503


>gi|302771513|ref|XP_002969175.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
 gi|300163680|gb|EFJ30291.1| hypothetical protein SELMODRAFT_90172 [Selaginella moellendorffii]
          Length = 399

 Score =  202 bits (514), Expect = 4e-49,   Method: Compositional matrix adjust.
 Identities = 123/379 (32%), Positives = 200/379 (52%), Gaps = 6/379 (1%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGF 244
           D  TY ++V   C  G++++A+ LL EM    G  P    YN  +  +  +GK  +A+  
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            K+     C P ++T+  LI  +CK   +  A +VLD+M   G + ++VTYN+L+N    
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE-ASHSPTVF 363
            G+  +AVLV+  + +    P++ TYN ++H     G  D     L+ M + A  SP  F
Sbjct: 137 AGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVS-KNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           TY+ILINGLCK   + +A     +M+  K+C   +V +NT++   CK   L+ A +LL  
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +    C+P ++TY+T+IDGL + G ++K   L  +M+  G  PD +T+  L+ G C+A +
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + EA  L+K + + G       Y LV  GLCK  K+DMA  +L  +       D   F T
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFET 373

Query: 543 IVKKVADDGMTEEAYKLWQ 561
           ++  V    +   A++ W+
Sbjct: 374 LLLSVKKRLLDRAAFQKWK 392



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 180/362 (49%), Gaps = 6/362 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARR-NQIPDFHFCINLIRGLIRIDRIEKASKV 174
           D  T   +++  C  G+L  A  L+  M ++    P        +  L +  ++ +A +V
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           ++ M      PD +T+N ++ GLCK G++  A  +LDEM  SG   +++TYNT++  +  
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIV 293
            G+  +A+   +        P   TY  +I   CK   I RA   L++M    GCSPD  
Sbjct: 137 AGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           TY+ L+N  CK      A  ++  ++ R     + + +NTL+         D   ++L  
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E   +P V TY+ +I+GLC+ G VD+      +MVS+ C+PD+VTY  ++  LCK G 
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA +L+  +    C+P  +TY+ + DGL K   ++ A  L   + + G   D +   T
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFET 373

Query: 473 LI 474
           L+
Sbjct: 374 LL 375



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 153/310 (49%), Gaps = 6/310 (1%)

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           TY +L+   C    +  A+++L +M  + G +P    YN  V+  CK GK  +A+ V+ N
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +     +P+ +T+NTL+  L   G  D   ++LD M  +  +  + TYN LINGL   G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG-SSCSPCLITYN 436
              A+     M +    PD  TYN ++   CK G ++ A   L  +   + CSP   TY+
Sbjct: 140 SGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 437 TLIDGLAKKGCMEKAMVLYGQMM-ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
            LI+GL K   + KA  L  +M+         +   TL+ G+C+A  ++ A +LL  + +
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G       Y  +I GLC+   VD    +LE M+S   KPD   ++ +V  +   G   E
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 556 AYKLWQKLIE 565
           A +L ++++E
Sbjct: 317 ACRLVKRMLE 326



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 35/135 (25%), Positives = 65/135 (48%), Gaps = 8/135 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + I+   C  G +     L++ M  R   PD      L+ GL +  ++ +A +++
Sbjct: 262 DVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLV 321

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL----RT 231
           + M+  G  P+ +TY+++  GLCK  ++  A  LL  +   G   DV+ + T+L    + 
Sbjct: 322 KRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRVTDVVAFETLLLSVKKR 381

Query: 232 MFDNGKFKQAIGFWK 246
           + D   F++    WK
Sbjct: 382 LLDRAAFQK----WK 392


>gi|224132422|ref|XP_002328265.1| predicted protein [Populus trichocarpa]
 gi|222837780|gb|EEE76145.1| predicted protein [Populus trichocarpa]
          Length = 742

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 138/469 (29%), Positives = 225/469 (47%), Gaps = 30/469 (6%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM-- 178
           N ++ +FC  GK  DA KL+D M +    PD       I  L    ++ +AS++ + M  
Sbjct: 130 NTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQI 189

Query: 179 --VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
             V+    P+ ITYN+M+GG CK G +  A AL ++M VS    +  +YN  L  +   G
Sbjct: 190 DEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIG 249

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K  +A    K+ +  G  P + +Y I+++ +CK   +  A  ++  M   G  PD VTY 
Sbjct: 250 KLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYT 309

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L++  C  GK  +A  V+  ++  G  PN+ T N LL+SL   G     +++L  MNE 
Sbjct: 310 TLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEK 369

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS-----------------------KNC 393
            +     T NI+I+GLC  G +D+AI   N M +                       K C
Sbjct: 370 GYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKC 429

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD+++Y+T++  LCK G + EA +    + G +  P    Y+  I    K+G +  A  
Sbjct: 430 MPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSAFR 489

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +   M + G +    T+ +LI G    +Q+ E   L+ E+ +RG     S Y  V+  LC
Sbjct: 490 VLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLC 549

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVK---KVADDGMTEEAYKL 559
           +  +V  A  VL+ M+     P+ + FS ++K   K  D    +E +++
Sbjct: 550 EGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEI 598



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/414 (30%), Positives = 209/414 (50%), Gaps = 16/414 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L  FC  G L +A  L + M     + +       + GL+RI ++ +A  VL+ M
Sbjct: 202 TYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVLKEM 261

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+  +YN+++ GLCK G +  A  L+  M+ SG  PD +TY T+L      GK 
Sbjct: 262 VDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHTGKV 321

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A    ++ +R GC P   T  IL+  + K+  I+ A E+L  M  +G   D VT N +
Sbjct: 322 SEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTCNIV 381

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR--GCWDAVDKILDIMNEA 356
           ++  C  GK D A+ ++N + + G        +  L +LG+   G  D  D     M   
Sbjct: 382 IDGLCNNGKLDKAIEIVNGMWTHG--------SAALGNLGNSYIGLVDDSDSRKKCM--- 430

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P + +Y+ +I+GLCK G V  A   F +M+ KN QPD   Y+  + + CKEG ++ A
Sbjct: 431 ---PDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIHSFCKEGKISSA 487

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            ++L  +    C+  L TYN+LI GL  K  + +   L  +M E G+SPD   +  ++  
Sbjct: 488 FRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSS 547

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            C   +V++A  +L E+ ++G     S++ ++I   CK+       ++ E+ ++
Sbjct: 548 LCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFSAVDEIFEIALN 601



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 216/443 (48%), Gaps = 30/443 (6%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P  +    L+R   +  R++  S + + MV SG  P+T T+N+++G LC  G +  A  L
Sbjct: 19  PSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDAREL 78

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
            D+M   GCEP+  ++  ++R     G   + +    +  R G  P  + Y  LI   CK
Sbjct: 79  FDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFCK 138

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM----EP 325
           +     A +++D+M  +G SPD+VT+N+ ++  C  GK  +A  +  ++    +    +P
Sbjct: 139 EGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQP 198

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N ITYN +L      G  +    + + M  + +     +YNI + GL + G +  A    
Sbjct: 199 NIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLVL 258

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            +MV    +P++ +YN V+  LCK G+L +A  L+ L+  S   P  +TY TL+ G    
Sbjct: 259 KEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCHT 318

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G + +A  +  +MM +G SP++ T   L++   +  ++ EA +LL+++ ++G  +     
Sbjct: 319 GKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRISEAEELLQKMNEKGYVIDTVTC 378

Query: 506 RLVIHGLCKSKKVDMAIQVLELMIS---------------------SRYK--PDDTVFST 542
            +VI GLC + K+D AI+++  M +                     SR K  PD   +ST
Sbjct: 379 NIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSYIGLVDDSDSRKKCMPDLISYST 438

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           I+  +   G   EA K   K IE
Sbjct: 439 IISGLCKAGRVGEAKK---KFIE 458



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/478 (27%), Positives = 223/478 (46%), Gaps = 29/478 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N ++   C  G L DA +L D M  +   P ++ F I L+RG  R     K  ++L  
Sbjct: 58  TFNVLIGLLCDSGCLDDARELFDKMPEKGCEPNEYSFGI-LVRGYCRAGFTSKGLELLGE 116

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+ + YN ++   CK G+   A  L+DEM   G  PDV+T+N  +  +  +GK
Sbjct: 117 MRRLGFSPNKVVYNTLISSFCKEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGK 176

Query: 238 FKQAIGFWKD-QLRK--GCP-PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             +A   ++D Q+ +  G P P +ITY +++   CK+  +  A  + + M +     +  
Sbjct: 177 VLEASRIFRDMQIDEVLGLPQPNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRE 236

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN  +    + GK  +A LV+  ++  GMEPN  +YN ++  L   G       ++ +M
Sbjct: 237 SYNIWLLGLVRIGKLLEAQLVLKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLM 296

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
             +   P   TY  L++G C  G V  A N   +M+   C P+  T N +L +L KEG +
Sbjct: 297 TSSGVLPDTVTYTTLLHGYCHTGKVSEANNVLREMMRDGCSPNNYTCNILLYSLWKEGRI 356

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS--------- 464
           +EA +LL  +N        +T N +IDGL   G ++KA+ +   M  +G +         
Sbjct: 357 SEAEELLQKMNEKGYVIDTVTCNIVIDGLCNNGKLDKAIEIVNGMWTHGSAALGNLGNSY 416

Query: 465 --------------PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
                         PD I++ T+I G C+A +V EA     E+  +  +  ++ Y + IH
Sbjct: 417 IGLVDDSDSRKKCMPDLISYSTIISGLCKAGRVGEAKKKFIEMMGKNLQPDSAIYDVFIH 476

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             CK  K+  A +VL+ M           +++++  +       E Y L  ++ E  V
Sbjct: 477 SFCKEGKISSAFRVLKDMEKKGCNKTLQTYNSLIMGLGSKNQIFEIYGLIDEMRERGV 534



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 86/315 (27%), Positives = 148/315 (46%), Gaps = 4/315 (1%)

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
           PP +  Y +L+    K+  +     +  DM   G SP+  T+N L+   C  G  DDA  
Sbjct: 18  PPSIYLYNVLLRSCTKEGRVDCVSWLCKDMVASGVSPETYTFNVLIGLLCDSGCLDDARE 77

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           + + +  +G EPN  ++  L+      G      ++L  M     SP    YN LI+  C
Sbjct: 78  LFDKMPEKGCEPNEYSFGILVRGYCRAGFTSKGLELLGEMRRLGFSPNKVVYNTLISSFC 137

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC----S 429
           K G  D A    ++M      PD+VT+N  + ALC  G + EA ++   +          
Sbjct: 138 KEGKTDDAEKLVDEMRKDGLSPDVVTFNARISALCSSGKVLEASRIFRDMQIDEVLGLPQ 197

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P +ITYN ++ G  K+G +E+A  L+ +M  +    +  ++   + G  R  ++ EA  +
Sbjct: 198 PNIITYNLMLGGFCKEGMLEEARALFEKMKVSENLMNRESYNIWLLGLVRIGKLLEAQLV 257

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           LKE+   G +    +Y +V+ GLCK+  +  A  ++ LM SS   PD   ++T++     
Sbjct: 258 LKEMVDMGMEPNVYSYNIVMDGLCKNGVLFDARMLMRLMTSSGVLPDTVTYTTLLHGYCH 317

Query: 550 DGMTEEAYKLWQKLI 564
            G   EA  + ++++
Sbjct: 318 TGKVSEANNVLREMM 332



 Score = 82.0 bits (201), Expect = 7e-13,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 127/310 (40%), Gaps = 71/310 (22%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  ++ D    +  + +FC  GK++ A +++  M ++                       
Sbjct: 461 GKNLQPDSAIYDVFIHSFCKEGKISSAFRVLKDMEKKG---------------------- 498

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
             +K LQ            TYN ++ GL  + QI     L+DEM   G  PDV  YN +L
Sbjct: 499 -CNKTLQ------------TYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVL 545

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
            ++ + G+ K A     + L+KG  P + +++ILI+  CK C  + A++ + ++A+  C 
Sbjct: 546 SSLCEGGRVKDAPSVLDEMLQKGISPNISSFSILIKAFCKACDFS-AVDEIFEIALNVCG 604

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
                Y+                L  N LL  G     +    L  +        A+D+ 
Sbjct: 605 HKEALYS----------------LTFNELLVGG---EVVKAKELFET--------ALDRS 637

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            D+ N        F Y  LI+ LCK   +D A    ++++ K    D  ++  V+  L K
Sbjct: 638 FDVGN--------FLYKDLIDHLCKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGK 689

Query: 410 EGMLNEALQL 419
            G  +EA +L
Sbjct: 690 RGNKHEADEL 699



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 48/245 (19%), Positives = 96/245 (39%), Gaps = 36/245 (14%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T N ++    S+ ++ +   LID M  R   PD     N++  L    R++ A  VL  
Sbjct: 504 QTYNSLIMGLGSKNQIFEIYGLIDEMRERGVSPDVSIYNNVLSSLCEGGRVKDAPSVLDE 563

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G  P+  ++++++   CK     SA+  + E++++ C      Y+     +   G+
Sbjct: 564 MLQKGISPNISSFSILIKAFCKACDF-SAVDEIFEIALNVCGHKEALYSLTFNELLVGGE 622

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A   ++  L +        Y  LI+ +                              
Sbjct: 623 VVKAKELFETALDRSFDVGNFLYKDLIDHL------------------------------ 652

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
                CK  K DDA  +++ L+ +G   +  ++  ++  LG RG     D++ + M E +
Sbjct: 653 -----CKDEKLDDASGILHKLIDKGYWFDPASFMPVIDGLGKRGNKHEADELAEKMMEMA 707

Query: 358 HSPTV 362
               V
Sbjct: 708 SEGKV 712


>gi|413915966|gb|AFW55898.1| hypothetical protein ZEAMMB73_909442, partial [Zea mays]
          Length = 694

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 209/414 (50%), Gaps = 1/414 (0%)

Query: 152 FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD 211
           F F I +I  L +   + +A  +   M   G  PD +TYN ++ G  K G++     L+ 
Sbjct: 200 FTFNI-VIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVS 258

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           EM  SGC  DV+TYN ++      G  ++A  ++ +  R G    ++T +  ++  CK+ 
Sbjct: 259 EMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEG 318

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            +  A+++   M + G  P+  TY SLV+ +CK G+ DDA+++++ ++ +G+ PN +TY 
Sbjct: 319 LVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYT 378

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            ++  L   G     D +L +M  A        Y  LI+G       +RA++  N+M +K
Sbjct: 379 VMVDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIHGHFMNKNSERALDLLNEMKNK 438

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
             + D+  Y T++  LCK   L+EA  LLH ++     P  + Y T++D   K G   +A
Sbjct: 439 GMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEA 498

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           + L  ++ ++G+ P+ +T+  LI G C+A  + EA+    ++ + G       Y  +I G
Sbjct: 499 VALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDG 558

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            CK   +  A+ ++  M+      D  V+++++      G  + A+ L  K+IE
Sbjct: 559 FCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIE 612



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 130/449 (28%), Positives = 218/449 (48%), Gaps = 6/449 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C +G+L +A  L   M      PD     +LI G  +   +E+   ++  M
Sbjct: 201 TFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELEEVELLVSEM 260

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG   D +TYN ++    K G I  A +   EM   G   +V+T +T +      G  
Sbjct: 261 RKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFVDAFCKEGLV 320

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+  +     +G  P   TYT L++  CK   +  AI +LD+M  +G  P++VTY  +
Sbjct: 321 REAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLVPNVVTYTVM 380

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  CK+GK   A  V++ +   G++ N + Y TL+H           ++ LD++NE  +
Sbjct: 381 VDGLCKEGKVAVADDVLSLMERAGVKANELLYTTLIH---GHFMNKNSERALDLLNEMKN 437

Query: 359 SPT---VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 V  Y  LI GLCK   +D A +  ++M     +P+ V Y T++ A  K G  +E
Sbjct: 438 KGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESE 497

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ LLH +  S   P ++TY  LIDGL K G + +A+  + +M E G+ P+   + TLI 
Sbjct: 498 AVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLID 557

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GFC+   + +AV L+ E+  +G  +    Y  +I G  K   +  A  +   MI +  + 
Sbjct: 558 GFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQL 617

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           D   ++  +    +  M +EA  +  ++I
Sbjct: 618 DLYCYTCFISGFCNMNMMQEARGVLSEMI 646



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 116/448 (25%), Positives = 207/448 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +   G+L +   L+  M +     D      LI    +   IEKA    
Sbjct: 233 DVVTYNSLIDGYGKCGELEEVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYF 292

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G + + +T +  V   CK G +R A+ L  +M V G  P+  TY +++      
Sbjct: 293 GEMKRLGVMANVVTLSTFVDAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKA 352

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   AI    + + +G  P ++TYT++++ +CK+  +A A +VL  M   G   + + Y
Sbjct: 353 GRLDDAIVLLDEMVHQGLVPNVVTYTVMVDGLCKEGKVAVADDVLSLMERAGVKANELLY 412

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++        + A+ ++N + ++GME +   Y TL+  L      D    +L  M++
Sbjct: 413 TTLIHGHFMNKNSERALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDD 472

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    Y  +++   K G    A+   +++     QP++VTY  ++  LCK G + E
Sbjct: 473 CGLRPNTVIYTTIMDAFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYE 532

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+     +      P +  Y TLIDG  K G + KA+ L  +M++ G+S D + + +LI 
Sbjct: 533 AISHFDKMRELGLDPNVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLID 592

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G  +   ++ A  L  ++ + G ++    Y   I G C    +  A  VL  MI +   P
Sbjct: 593 GHMKQGDLQGAFALKAKMIETGLQLDLYCYTCFISGFCNMNMMQEARGVLSEMIGTGITP 652

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D T ++ +++K    G  EEA  L  ++
Sbjct: 653 DKTAYNCLIRKYQKLGNMEEASSLQNEM 680



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/257 (29%), Positives = 132/257 (51%), Gaps = 4/257 (1%)

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +++L++     G  DDAV  +  +    + PN+ T N +L  L        V ++     
Sbjct: 136 FDTLLSLLADHGLLDDAVRALARVRQLRVPPNTRTCNHILLRLARNRQGGLVRRLF---- 191

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E   +P VFT+NI+I+ LCK G +  A   F +M +  C PD+VTYN+++    K G L 
Sbjct: 192 EHLPAPNVFTFNIVIDFLCKQGELVEARALFVRMKAMGCSPDVVTYNSLIDGYGKCGELE 251

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           E   L+  +  S C+  ++TYN LI+  +K G +EKA   +G+M   G+  + +T  T +
Sbjct: 252 EVELLVSEMRKSGCAADVVTYNALINCFSKFGWIEKAYSYFGEMKRLGVMANVVTLSTFV 311

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             FC+   V EA+ L  ++  RG       Y  ++ G CK+ ++D AI +L+ M+     
Sbjct: 312 DAFCKEGLVREAMKLFAQMRVRGMMPNEFTYTSLVDGTCKAGRLDDAIVLLDEMVHQGLV 371

Query: 535 PDDTVFSTIVKKVADDG 551
           P+   ++ +V  +  +G
Sbjct: 372 PNVVTYTVMVDGLCKEG 388



 Score = 98.6 bits (244), Expect = 9e-18,   Method: Compositional matrix adjust.
 Identities = 72/296 (24%), Positives = 130/296 (43%), Gaps = 37/296 (12%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A  L++ M  +    D      LI GL ++ ++++A  +L  M   G  P+T+ Y  ++ 
Sbjct: 428 ALDLLNEMKNKGMELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMD 487

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
              K G+   A+ALL ++  SG +P+V+TY  ++  +   G   +AI  +      G  P
Sbjct: 488 AFFKAGKESEAVALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDP 547

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            +  YT LI+  CK   +++A+ ++++M  +G S D V Y SL++   KQG    A  + 
Sbjct: 548 NVQVYTTLIDGFCKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALK 607

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
             ++  G++                         LD+          + Y   I+G C  
Sbjct: 608 AKMIETGLQ-------------------------LDL----------YCYTCFISGFCNM 632

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG--SSCS 429
            ++  A    ++M+     PD   YN ++    K G + EA  L + +    SSC+
Sbjct: 633 NMMQEARGVLSEMIGTGITPDKTAYNCLIRKYQKLGNMEEASSLQNEMESVLSSCT 688



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/222 (24%), Positives = 96/222 (43%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      ++   C   KL +A  L+  M      P+      ++    +  +  +A 
Sbjct: 440 MELDVSLYGTLIWGLCKVQKLDEAKSLLHKMDDCGLRPNTVIYTTIMDAFFKAGKESEAV 499

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  +  SG  P+ +TY  ++ GLCK G I  AI+  D+M   G +P+V  Y T++   
Sbjct: 500 ALLHKIPDSGLQPNVVTYCALIDGLCKAGSIYEAISHFDKMRELGLDPNVQVYTTLIDGF 559

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A+    + + KG     + YT LI+   KQ  +  A  +   M   G   D+
Sbjct: 560 CKIGSLSKAVHLMNEMVDKGMSLDKVVYTSLIDGHMKQGDLQGAFALKAKMIETGLQLDL 619

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
             Y   ++  C      +A  V++ ++  G+ P+   YN L+
Sbjct: 620 YCYTCFISGFCNMNMMQEARGVLSEMIGTGITPDKTAYNCLI 661


>gi|414882142|tpg|DAA59273.1| TPA: hypothetical protein ZEAMMB73_713491 [Zea mays]
          Length = 987

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 141/488 (28%), Positives = 238/488 (48%), Gaps = 41/488 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIM----ARRNQIPDFHFCINLIRGLIRIDRI 168
           ++ D  T N +L  +C    L  A  L+ +M     RRN+   + + I LI+GL     +
Sbjct: 210 MQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNE---YSYTI-LIQGLCEARCV 265

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A  ++ +MV  G   +  TY +++ GLCK G+I  A  LLDEM + G  P V TYN +
Sbjct: 266 REALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAM 325

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +     +G+ K A+G      + GC P   TY  LI  +C    +  A E+L+     G 
Sbjct: 326 IDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGG-KLDEAEELLNGAIARGF 384

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P ++T+ +L+N  CK  + DDA+ V +N++S   + +   Y  L++ L  +       +
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE 444

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
            L+ M     +P V TY  +I+G CK G+V  A+  F  M  + C P+  TY +++  L 
Sbjct: 445 TLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLI 504

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           ++  L++A+ L+  +     +P +ITY TLI G  KK   + A  L+  M +NG++PD+ 
Sbjct: 505 QDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQ 564

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIG----------------KRGN---------KMRNS 503
            +  L    C++ + EEA   L   G                K GN         KM N 
Sbjct: 565 AYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 624

Query: 504 A-------YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                   Y +++  LCK KK++ A+ +L+ M  S  K +   ++ I+ ++  +G  + A
Sbjct: 625 GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHA 684

Query: 557 YKLWQKLI 564
             L+ ++I
Sbjct: 685 KSLFNEMI 692



 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 139/479 (29%), Positives = 214/479 (44%), Gaps = 39/479 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E +   ++Q  C    + +A  L+ +M       + H    LI+GL +  RI  A  +L
Sbjct: 248 NEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLL 307

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M + G VP   TYN M+ G CK G+++ A+ +   M  +GC PD  TYN+++  +   
Sbjct: 308 DEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC-G 366

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK-------------------------- 269
           GK  +A       + +G  P +IT+T LI   CK                          
Sbjct: 367 GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAY 426

Query: 270 ---------QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
                    +C +  A E L++M   G +P++VTY S+++  CK G    A+ V   +  
Sbjct: 427 GVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEH 486

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G  PN+ TY +L++ L           ++  M E   +P V TY  LI G CK    D 
Sbjct: 487 EGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 546

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A   F  M      PD   YN +  ALCK G   EA   L +  G   +   +TY +L+D
Sbjct: 547 AFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL-VRKGVVLTK--VTYTSLVD 603

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G +K G  + A VL  +M+  G   D  T+  L+   C+  ++ EA+ +L ++   G K 
Sbjct: 604 GFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKC 663

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
              AY ++I  + K  K D A  +   MISS +KP  T ++  +      G  EEA  L
Sbjct: 664 NIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHL 722



 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 219/444 (49%), Gaps = 43/444 (9%)

Query: 155 CINL-IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI---------- 203
           C NL +R L+R D  E   K+   +V  G +PDT+TYN M+   CK+G +          
Sbjct: 146 CYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLL 205

Query: 204 -------------------------RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                                    R A  LL  M + GC  +  +Y  +++ + +    
Sbjct: 206 RESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCEARCV 265

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+      +  GC   L TYT+LI+ +CK+  I  A  +LD+M + G  P + TYN++
Sbjct: 266 REALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAM 325

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA-- 356
           ++  CK G+  DA+ +   +   G  P+  TYN+L++ L    C   +D+  +++N A  
Sbjct: 326 IDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL----CGGKLDEAEELLNGAIA 381

Query: 357 -SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +PTV T+  LING CK   +D A+   + M+S NC+ D+  Y  ++  L K+  L E
Sbjct: 382 RGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKE 441

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A + L+ +  +  +P ++TY ++IDG  K G +  A+ ++  M   G  P+  T+ +LI+
Sbjct: 442 AKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIY 501

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G  +  ++ +A+ L+ ++ + G       Y  +I G CK  + D A ++ E+M  +   P
Sbjct: 502 GLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP 561

Query: 536 DDTVFSTIVKKVADDGMTEEAYKL 559
           D+  ++ +   +   G  EEAY  
Sbjct: 562 DEQAYNVLTDALCKSGRAEEAYSF 585



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 218/449 (48%), Gaps = 4/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C +G L  A +   ++       D + C  L+ G  R   + KA  +L
Sbjct: 178 DTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLL 237

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M + G   +  +Y +++ GLC+   +R A+ L+  M   GC  ++ TY  +++ +   
Sbjct: 238 MMMPLMGCRRNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKE 297

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   A G   +   +G  P + TY  +I+  CK   +  A+ +   M   GC+PD  TY
Sbjct: 298 GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTY 357

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NSL+   C  GK D+A  ++N  ++RG  P  IT+  L++        D   ++   M  
Sbjct: 358 NSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMIS 416

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           ++    +  Y +LIN L K   +  A  + N+M +    P++VTY +++   CK GM+  
Sbjct: 417 SNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVTYTSIIDGYCKVGMVGA 476

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL++  L+    C P   TY +LI GL +   + KAM L  +M E+GI+P  IT+ TLI 
Sbjct: 477 ALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVITYTTLIQ 536

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  + + A  L + + + G      AY ++   LCKS + + A   L   +      
Sbjct: 537 GQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVL 593

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               ++++V   +  G T+ A  L +K++
Sbjct: 594 TKVTYTSLVDGFSKAGNTDFAAVLIEKMV 622



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 121/479 (25%), Positives = 217/479 (45%), Gaps = 28/479 (5%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I+  +C  G +  A ++  +M      P+     +LI GLI+  ++ KA  ++  M
Sbjct: 460 TYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKM 519

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P  ITY  ++ G CK+ +  +A  L + M  +G  PD   YN +   +  +G+ 
Sbjct: 520 QEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRA 579

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A  F    +RKG     +TYT L++   K      A  +++ M  EGC  D+ TY+ L
Sbjct: 580 EEAYSFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVL 636

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CKQ K ++A+ +++ +   G++ N + Y  ++  +   G  D    + + M  + H
Sbjct: 637 LQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGH 696

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P+  TY + I+  CK G ++ A +   +M      PD+VTYN  +      G ++ A  
Sbjct: 697 KPSATTYTVFISSYCKIGRIEEAEHLIGEMERDGVTPDVVTYNIFINGCGHMGYIDRAFS 756

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV----------------LYGQMMENG 462
            L  +  +SC P   TY  L+    K   +    V                L  +MM++G
Sbjct: 757 TLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHYVDTSGMWNWIELNMVWQLLERMMKHG 816

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           ++P  +T+ ++I GFC+A ++EEA  LL  +  +        Y ++I   C  K    A+
Sbjct: 817 LNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFGKAV 876

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL---------IEWKVFEKG 572
             +  MI   ++P    +  ++  + D+G  + A  L+  L         + WK+   G
Sbjct: 877 SFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDG 935



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 72/297 (24%), Positives = 122/297 (41%), Gaps = 16/297 (5%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+      GK   A  L + M      P        I    +I RIE+A  ++  M   G
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGRIEEAEHLIGEMERDG 730

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD----NGKF 238
             PD +TYN+ + G    G I  A + L  M  + CEP+  TY  +L+        N  +
Sbjct: 731 VTPDVVTYNIFINGCGHMGYIDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHY 790

Query: 239 KQAIGFW------------KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
               G W            +  ++ G  P ++TY+ +I   CK   +  A  +LD M  +
Sbjct: 791 VDTSGMWNWIELNMVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGK 850

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
             SP+   Y  L+   C    +  AV  + +++  G +P   +Y+ L+  L   G +D  
Sbjct: 851 DISPNEEIYTMLIKCCCDIKLFGKAVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRA 910

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             +   +    ++     + IL +GL K G VD        M +++C+ D  +Y+ +
Sbjct: 911 KSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 69/250 (27%), Positives = 115/250 (46%), Gaps = 1/250 (0%)

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           DA+  I  +  + +  +   YN  L SL      + + K+   + +    P   TYN +I
Sbjct: 127 DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMI 186

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
              CK G +  A   F  +     Q D  T N +L   C+   L +A  LL ++    C 
Sbjct: 187 MAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCR 246

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
               +Y  LI GL +  C+ +A+VL   M+ +G S +  T+  LI G C+  ++ +A  L
Sbjct: 247 RNEYSYTILIQGLCEARCVREALVLVFMMVHDGCSLNLHTYTLLIKGLCKEGRIHDARGL 306

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L E+  RG       Y  +I G CKS ++  A+ +  LM  +   PDD  +++++  +  
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC- 365

Query: 550 DGMTEEAYKL 559
            G  +EA +L
Sbjct: 366 GGKLDEAEEL 375


>gi|255570422|ref|XP_002526170.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223534547|gb|EEF36246.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 504

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 129/473 (27%), Positives = 233/473 (49%), Gaps = 37/473 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMAR---RNQIPDFHFCINLIR--------------- 160
           T + +++  C  GK+ DA +L D M R   +  I  + + IN +R               
Sbjct: 11  TVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARRAVELHRRM 70

Query: 161 ------------GLIRIDRI------EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
                       GL+ ID +       K  K+ + M+  G  P+ I Y+ ++ GLC+ G+
Sbjct: 71  LSEICSGNFFTYGLV-IDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLINGLCRVGK 129

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +R A+ L DEM   G + +VITYN+++      G +K+A   +   + +G  P ++T+T 
Sbjct: 130 LREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILPDVVTFTT 189

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI+ + K+  +  A ++ + M  +G +P+IVTYNSL+N  C   + D AV +   ++ RG
Sbjct: 190 LIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLFEVMVERG 249

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           ++ + I+YNTL++   + G  +    +   M     +P++ TY IL+  L + G +  A 
Sbjct: 250 IKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQNGRIRTAK 309

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             FN M      P + TY  +L  LCK G + EA+ +   L      P +  Y+ LI G+
Sbjct: 310 ELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIYSILIGGM 369

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            +    E AM ++ ++   G+ P+ +T+  +I G C+  ++ EA  L  ++ + G +   
Sbjct: 370 FQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEESGCEQDE 429

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            ++  +I G  +  +V  A++ L+ M    + P+D+V   +V   A D  + E
Sbjct: 430 ISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPNDSVTLMLVNLYAADAQSSE 482



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 105/383 (27%), Positives = 200/383 (52%)

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           SG  P+ +T + +V G+C  G++  A+ L D+M+ SG + D++ Y  ++  +    + ++
Sbjct: 3   SGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQARR 62

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +  L + C     TY ++I+ +CK     + +++  +M   G  P+++ Y+SL+N
Sbjct: 63  AVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLIN 122

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ GK  +AV + + ++S+G++ N ITYN+L+H+    G W    +    M      P
Sbjct: 123 GLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGILP 182

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V T+  LI+ L K G V  A   F  M+ +   P+IVTYN++L  LC    ++ A++L 
Sbjct: 183 DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLF 242

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            ++        +I+YNTLI+G    G  E+AM L+ +M    ++P   T+  L+    + 
Sbjct: 243 EVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQN 302

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++  A +L   +   G       Y +++ GLCK+  ++ AI V   + S +YKP   ++
Sbjct: 303 GRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIY 362

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           S ++  +      E A +++ ++
Sbjct: 363 SILIGGMFQARRWESAMEIFDEI 385



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 93/315 (29%), Positives = 168/315 (53%)

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           ++ G  P L+T + L++ +C +  +  A+E+ D M   G   DI+ Y  L+N   K  + 
Sbjct: 1   MKSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQA 60

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             AV +   +LS     N  TY  ++ SL   G      K+   M      P V  Y+ L
Sbjct: 61  RRAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSL 120

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           INGLC+ G +  A+N F++MVS+  + +++TYN+++ A C+ G+  EA +    + G   
Sbjct: 121 INGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGI 180

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P ++T+ TLID L+KKG +++A  ++  M++ G +P+ +T+ +L+ G C   Q++ AV 
Sbjct: 181 LPDVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVR 240

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L + + +RG K+   +Y  +I+G C S K + A+ +   M      P  T ++ ++K + 
Sbjct: 241 LFEVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALY 300

Query: 549 DDGMTEEAYKLWQKL 563
            +G    A +L+  +
Sbjct: 301 QNGRIRTAKELFNNM 315



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 69/281 (24%), Positives = 140/281 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++ +   +GK+ +A K+ ++M ++ + P+     +L+ GL    +++ A ++ 
Sbjct: 183 DVVTFTTLIDHLSKKGKVQEAYKIFELMIKQGEAPNIVTYNSLLNGLCLHHQMDHAVRLF 242

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++MV  G   D I+YN ++ G C  G+   A+ L  +M      P + TY  +L+ ++ N
Sbjct: 243 EVMVERGIKIDVISYNTLINGYCTSGKTEEAMTLFRKMQYEELTPSITTYTILLKALYQN 302

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ + A   + +    G  P L TYT+L++ +CK   I  AI+V   +      P I  Y
Sbjct: 303 GRIRTAKELFNNMQICGQSPSLDTYTVLLDGLCKNGCIEEAIDVFRSLKSIKYKPSIRIY 362

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+    +  +++ A+ + + + + G+ PN +TYN +++ L   G     +++   M E
Sbjct: 363 SILIGGMFQARRWESAMEIFDEIPTVGLVPNIVTYNIMINGLCKEGKLLEAERLFVQMEE 422

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           +       ++N +I G  +   V +A+    +M  KN  P+
Sbjct: 423 SGCEQDEISFNFIIRGFLQENQVQKAMEFLKRMREKNFSPN 463



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 62/211 (29%), Positives = 107/211 (50%)

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           ++ + P + T + L+ G+C  G V  A+  F++M     Q DI+ Y  ++ AL K     
Sbjct: 2   KSGYQPNLVTVSTLVKGMCFEGKVMDALELFDKMTRSGFQGDILLYGYLINALRKTRQAR 61

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A++L   +    CS    TY  +ID L K G   K + ++ +M+  GI P+ I + +LI
Sbjct: 62  RAVELHRRMLSEICSGNFFTYGLVIDSLCKDGLAIKGLKMFREMINMGICPNVIVYSSLI 121

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G CR  ++ EAV+L  E+  +G K     Y  +IH  C+      A +    M+     
Sbjct: 122 NGLCRVGKLREAVNLFDEMVSQGIKANVITYNSLIHASCRFGLWKEATRTFSQMVGEGIL 181

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   F+T++  ++  G  +EAYK+++ +I+
Sbjct: 182 PDVVTFTTLIDHLSKKGKVQEAYKIFELMIK 212


>gi|125540047|gb|EAY86442.1| hypothetical protein OsI_07823 [Oryza sativa Indica Group]
          Length = 703

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 119/438 (27%), Positives = 211/438 (48%), Gaps = 4/438 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++++ C R  L  A + + +M R    PD +   +LI G  R ++++ A  +   M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G   D ++Y  ++ G C+ G+I  A+ L  EM     +PD+  Y  +++ +   G+ 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMD----QPDMHMYAALVKGLCKAGRG 128

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++ +   +     G  P    Y  +++  C +     A E+L +M  +G +P +VT  ++
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK+G+  DA+ V+  +  RG +PN  TYN L+    + G       +L+ M     
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   TYN+LI G C  G ++ A      M       D  TYN ++ ALCK+G  ++A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   L      P  +T+N+LI+GL K G ++ A     +M+  G +PD  T+ + I   C
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLC 368

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +    +E +  + E+ ++  K     Y +VIH L K +   +  +    M+SS   PD  
Sbjct: 369 KMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVV 428

Query: 539 VFSTIVKKVADDGMTEEA 556
            ++T ++    +G   EA
Sbjct: 429 TYTTSMRAYCIEGRLNEA 446



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 122/448 (27%), Positives = 210/448 (46%), Gaps = 5/448 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ FC  G++ +A +L   M +    PD H    L++GL +  R E+   +L+ M   G
Sbjct: 87  LIEGFCETGRIDEAVELFGEMDQ----PDMHMYAALVKGLCKAGRGEEGLLMLRRMKELG 142

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P T  Y  +V   C   + + A  +L EM   G  P V+T   ++      G+   A+
Sbjct: 143 WRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 202

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +    +GC P + TY  L++  C +  + +A+ +L+ M + G +PD VTYN L+   
Sbjct: 203 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGVNPDAVTYNLLIRGQ 262

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G  + A  ++  +   G+  +  TYN L+++L   G  D    + D +      P  
Sbjct: 263 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 322

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+N LINGLCK G VD A     +MVS  C PD  TY++ +  LCK     E L  +  
Sbjct: 323 VTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 382

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  + Y  +I  L K+         +G+M+ +G +PD +T+ T +  +C   +
Sbjct: 383 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 442

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + EA ++L E+ K G  +   AY  ++ G     + D A+ +L+ M S    P+   +  
Sbjct: 443 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 502

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFE 570
           +++ +    + E+   L    + WK  E
Sbjct: 503 LLRHLVRMRLVEDVLPLTPAGV-WKAIE 529



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 205/441 (46%), Gaps = 53/441 (12%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G+++DA +++++M  R   P+      L++G     ++ KA  +L  M
Sbjct: 184 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKM 243

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G  PD +TYN+++ G C  G I SA  LL  M   G   D  TYN ++  +  +G+ 
Sbjct: 244 RVCGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 303

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA   +     +G  P  +T+  LI  +CK   +  A + L+ M   GC+PD  TY+S 
Sbjct: 304 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSF 363

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK     + +  I  +L + ++P+++ Y  ++H            K+L   N    
Sbjct: 364 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH------------KLLKERN---- 407

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                           YGLV R   ++ +MVS  C PD+VTY T + A C EG LNEA  
Sbjct: 408 ----------------YGLVAR---TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 448

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  ++ +  +   + YNTL+DG A  G  + A+ +  QM      P+  T+  L+    
Sbjct: 449 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 508

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R   VE+ + L                     G+ K+ ++     + ++M  + + P+  
Sbjct: 509 RMRLVEDVLPLTPA------------------GVWKAIELTDVFGLFDVMKKNEFLPNSG 550

Query: 539 VFSTIVKKVADDGMTEEAYKL 559
            +S+I++  ++DG TEEA  L
Sbjct: 551 TYSSILEGFSEDGRTEEATSL 571



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 110/454 (24%), Positives = 209/454 (46%), Gaps = 17/454 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N +++  C  G +  A +L+ +M     I D +    LI  L +  R ++A 
Sbjct: 248 VNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQAC 307

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   +   G  P+ +T+N ++ GLCK G++  A   L++M  +GC PD  TY++ +  +
Sbjct: 308 SLFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMVSAGCTPDTYTYSSFIEHL 367

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                 ++ + F  + L+K   P  + YTI+I ++ K+           +M   GC+PD+
Sbjct: 368 CKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDV 427

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY + +   C +G+ ++A  V+  +   G+  +++ YNTL+    S G  D    IL  
Sbjct: 428 VTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQ 487

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVD-----------RAIN------SFNQMVSKNCQP 395
           M   +  P  FTY IL+  L +  LV+           +AI        F+ M      P
Sbjct: 488 MTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEFLP 547

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +  TY+++L    ++G   EA  L+ L+   S S     Y  L+    K      A VL 
Sbjct: 548 NSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWVLV 607

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M+++G  P  ++++ L+ G     Q ++A ++      +        ++++I GL K 
Sbjct: 608 CSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLIKK 667

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
              D++ +++ ++     +P    ++ + +++ D
Sbjct: 668 GHSDISREMIIMLERMNCRPSHQTYAMLTEELPD 701



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 93/341 (27%), Positives = 162/341 (47%), Gaps = 4/341 (1%)

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           TYN ++R++        A+ +    +R G  P   T+  LI   C+   +  A ++ D M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
            + G + D+V+Y +L+   C+ G+ D+AV     L     +P+   Y  L+  L   G  
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAV----ELFGEMDQPDMHMYAALVKGLCKAGRG 128

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           +    +L  M E    P+   Y  +++  C       A     +M  K   P +VT   V
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEMFEKGLAPCVVTCTAV 188

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + A CKEG +++AL++L L+    C P + TYN L+ G   +G + KAM L  +M   G+
Sbjct: 189 INAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMALLNKMRVCGV 248

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           +PD +T+  LI G C    +E A  LL+ +   G       Y  +I+ LCK  + D A  
Sbjct: 249 NPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACS 308

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + + + +   KP+   F++++  +   G  + A+K  +K++
Sbjct: 309 LFDSLETRGIKPNAVTFNSLINGLCKSGKVDIAWKFLEKMV 349



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/174 (28%), Positives = 90/174 (51%), Gaps = 9/174 (5%)

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           TYN V+ +LC+   L  AL+ L L+  S   P   T+N+LI G  +   ++ A  L+ +M
Sbjct: 13  TYNAVIRSLCRRADLASALRYLSLMVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKM 72

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
              G + D +++  LI GFC   +++EAV+L  E+ +    M    Y  ++ GLCK+ + 
Sbjct: 73  PLRGFAQDVVSYAALIEGFCETGRIDEAVELFGEMDQPDMHM----YAALVKGLCKAGRG 128

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
           +  + +L  M    ++P    ++ +V     +   +EA ++ Q++     FEKG
Sbjct: 129 EEGLLMLRRMKELGWRPSTRAYAAVVDFRCWERKAKEAEEMLQEM-----FEKG 177



 Score = 45.4 bits (106), Expect = 0.083,   Method: Compositional matrix adjust.
 Identities = 53/277 (19%), Positives = 105/277 (37%), Gaps = 52/277 (18%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T    ++ +C  G+L +A  ++  M++     D      L+ G   I + + A  +L
Sbjct: 426 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 485

Query: 176 QIMVMSGGVPDTITYNMMV-----------------GGLCKRGQIRSAIALLDEMSVSGC 218
           + M     VP+  TY +++                  G+ K  ++     L D M  +  
Sbjct: 486 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 545

Query: 219 EPDVITYNTILRTMFDNGKFKQAIG-----------------------FWKDQ------- 248
            P+  TY++IL    ++G+ ++A                         F K +       
Sbjct: 546 LPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWV 605

Query: 249 -----LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
                ++ G  P+L++Y  L+  +  +    +A E+  +   +  SPD + +  +++   
Sbjct: 606 LVCSMIQHGFIPHLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLI 665

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           K+G  D +  +I  L      P+  TY  L   L  R
Sbjct: 666 KKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDR 702


>gi|223635627|sp|Q9SZ20.2|PP339_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g26800
          Length = 514

 Score =  202 bits (513), Expect = 5e-49,   Method: Compositional matrix adjust.
 Identities = 131/444 (29%), Positives = 227/444 (51%), Gaps = 20/444 (4%)

Query: 132 KLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRID-------RIEKASKVLQIMVMS 181
           K  DA  L  +MA    +P   +F+  +  I  +   D       RIE A  + +I    
Sbjct: 65  KFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGI-EI---- 119

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
              PD  T N++V   C+  Q  SA++ L +M   G EPD++T ++++     +   K A
Sbjct: 120 --SPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDA 177

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +       + G    ++  TILI+ +CK   +  A+EVL  M   G SP++VTY+SL+  
Sbjct: 178 VYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITG 237

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK G+  DA   ++ + S+ + PN IT++ L+ +   RG    VD +  +M + S  P 
Sbjct: 238 LCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPN 297

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           VFTY+ LI GLC +  VD AI   + M+SK C P++VTY+T+     K   +++ ++LL 
Sbjct: 298 VFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLD 357

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +     +   ++ NTLI G  + G ++ A+ ++G M  NG+ P+  ++  ++ G     
Sbjct: 358 DMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANG 417

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +VE+A+   + + K  N +    Y ++IHG+CK+  V  A  +   +   R +PD   ++
Sbjct: 418 EVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYT 477

Query: 542 TIVKKVADDGMTEEA---YKLWQK 562
            ++ ++   GM  EA    + +QK
Sbjct: 478 IMIAELNRAGMRTEADALNRFYQK 501



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 164/339 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T + ++  FC    + DA  +   M +     D      LI  L +   +  A 
Sbjct: 154 IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 213

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +VL+ M   G  P+ +TY+ ++ GLCK G++  A   L EM      P+VIT++ ++   
Sbjct: 214 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 273

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK  +    +K  ++    P + TY+ LI  +C    +  AI++LD M  +GC+P++
Sbjct: 274 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNV 333

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY++L N   K  + DD + +++++  RG+  N+++ NTL+      G  D    +   
Sbjct: 334 VTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGY 393

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P + +YNI++ GL   G V++A++ F  M       DI+TY  ++  +CK  M
Sbjct: 394 MTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACM 453

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
           + EA  L + L      P    Y  +I  L + G   +A
Sbjct: 454 VKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 492



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/417 (23%), Positives = 201/417 (48%), Gaps = 6/417 (1%)

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCE--PDVI 223
           + + A  +  +M  S  +P  + +N ++  + K       I L   + +  G E  PD+ 
Sbjct: 65  KFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLY 124

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           T N ++       +   A+ +    ++ G  P ++T + L+   C    I  A+ V   M
Sbjct: 125 TCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQM 184

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G   D+V    L++  CK      A+ V+  +  RG+ PN +TY++L+  L   G  
Sbjct: 185 EKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRL 244

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
              ++ L  M+    +P V T++ LI+   K G + +  + +  M+  +  P++ TY+++
Sbjct: 245 ADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSL 304

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +  LC    ++EA+++L L+    C+P ++TY+TL +G  K   ++  + L   M + G+
Sbjct: 305 IYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGV 364

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           + + ++  TLI G+ +A +++ A+ +   +   G      +Y +V+ GL  + +V+ A+ 
Sbjct: 365 AANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALS 424

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV---FEKGTTLLA 577
             E M  +R   D   ++ ++  +    M +EAY L+ KL   +V   F+  T ++A
Sbjct: 425 RFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 481



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 184/400 (46%), Gaps = 1/400 (0%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           + +++G  +  D  T N ++  FC   + + A   +  M +    PD     +L+ G   
Sbjct: 111 IENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCL 170

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
            + I+ A  V   M   G   D +   +++  LCK   +  A+ +L  M   G  P+V+T
Sbjct: 171 SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 230

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y++++  +  +G+   A     +   K   P +IT++ LI+   K+  +++   V   M 
Sbjct: 231 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 290

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
                P++ TY+SL+   C   + D+A+ +++ ++S+G  PN +TY+TL +        D
Sbjct: 291 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 350

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
              K+LD M +   +    + N LI G  + G +D A+  F  M S    P+I +YN VL
Sbjct: 351 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVL 410

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             L   G + +AL     +  +     +ITY  +I G+ K   +++A  L+ ++    + 
Sbjct: 411 AGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVE 470

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           PD   +  +I    RA    EA D L    ++  +   SA
Sbjct: 471 PDFKAYTIMIAELNRAGMRTEA-DALNRFYQKHVRQNESA 509



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 71/313 (22%), Positives = 137/313 (43%), Gaps = 38/313 (12%)

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
           +   S   + Y  ++       K+DDA  +   +      P+ + +N +L ++     +D
Sbjct: 43  VRAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYD 102

Query: 345 AVDKILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
            V  +   +  A     SP ++T NIL+N  C+      A++   +M+    +PDIVT +
Sbjct: 103 VVINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTAS 162

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           +++   C    + +A+ +   +        ++    LID L K   +  A+ +  +M + 
Sbjct: 163 SLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDR 222

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEI-------------------GKRGNKMR- 501
           GISP+ +T+ +LI G C++ ++ +A   L E+                    KRG   + 
Sbjct: 223 GISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKV 282

Query: 502 NSAYRL---------------VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           +S Y++               +I+GLC   +VD AI++L+LMIS    P+   +ST+   
Sbjct: 283 DSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANG 342

Query: 547 VADDGMTEEAYKL 559
                  ++  KL
Sbjct: 343 FFKSSRVDDGIKL 355



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 58/251 (23%), Positives = 113/251 (45%), Gaps = 3/251 (1%)

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           R     +I Y  +L S      +D    +  +M  +   P++  +N ++  + K  + D 
Sbjct: 44  RAFSGTTIDYREVLRSGLHNIKFDDAFHLFVLMAYSYPLPSIVEFNKVLTAIAKMQMYDV 103

Query: 381 AINSFNQMVSKN---CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            IN + ++ +       PD+ T N ++   C+    + AL  L  +      P ++T ++
Sbjct: 104 VINLWKRIENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASS 163

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           L++G      ++ A+ + GQM + GI  D +    LI   C+   V  A+++LK +  RG
Sbjct: 164 LVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRG 223

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y  +I GLCKS ++  A + L  M S +  P+   FS ++   A  G   +  
Sbjct: 224 ISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVD 283

Query: 558 KLWQKLIEWKV 568
            +++ +I+  +
Sbjct: 284 SVYKMMIQMSI 294


>gi|414875530|tpg|DAA52661.1| TPA: hypothetical protein ZEAMMB73_467633 [Zea mays]
          Length = 987

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 124/444 (27%), Positives = 220/444 (49%), Gaps = 43/444 (9%)

Query: 155 CINL-IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI---------- 203
           C NL +R L+R D  E   K+   +V  G +PDT+TYN M+   CK+G +          
Sbjct: 146 CYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMIMAYCKKGSLAIAHRYFCLL 205

Query: 204 -------------------------RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                                    R A  LL  M + GC  +  +Y  +++ +++    
Sbjct: 206 RESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNEYSYTILIQGLYEARCV 265

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+      ++ GC   L  YT+LI+ +CK+  I  A  +LD+M + G  P + TYN++
Sbjct: 266 REALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAM 325

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA-- 356
           ++  CK G+  DA+ +   +   G  P+  TYN+L++ L    C   +D+  +++N A  
Sbjct: 326 IDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGL----CGGKLDEAEELLNGAIA 381

Query: 357 -SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +PTV T+  LING CK   +D A+   + M+S NC+ D+  Y  ++  L K+  L E
Sbjct: 382 RGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKE 441

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A + L+ +  +  +P ++ Y ++IDG  K G +  A+ ++  M   G  P+  T+ +LI+
Sbjct: 442 AKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIY 501

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G  +  ++ +A+ L+ ++ + G      AY  +I G CK  + D A ++ E+M  +   P
Sbjct: 502 GLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTP 561

Query: 536 DDTVFSTIVKKVADDGMTEEAYKL 559
           D+  ++ +   +   G  EEAY  
Sbjct: 562 DEQAYNVLTDALCKSGRAEEAYSF 585



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 138/488 (28%), Positives = 235/488 (48%), Gaps = 41/488 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIM----ARRNQIPDFHFCINLIRGLIRIDRI 168
           ++ D  T N +L  +C    L  A  L+ +M     RRN+   + + I LI+GL     +
Sbjct: 210 MQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCRRNE---YSYTI-LIQGLYEARCV 265

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A  ++ +MV  G   +   Y +++ GLCK G+I  A  LLDEM + G  P V TYN +
Sbjct: 266 REALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAM 325

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +     +G+ K A+G      + GC P   TY  LI  +C    +  A E+L+     G 
Sbjct: 326 IDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCGG-KLDEAEELLNGAIARGF 384

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P ++T+ +L+N  CK  + DDA+ V +N++S   + +   Y  L++ L  +       +
Sbjct: 385 TPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKE 444

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
            L+ M     +P V  Y  +I+G CK G+V  A+  F  M  + C P+  TY +++  L 
Sbjct: 445 TLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLI 504

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           ++  L++A+ L+  +     +P +I Y TLI G  KK   + A  L+  M +NG++PD+ 
Sbjct: 505 QDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQ 564

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIG----------------KRGN---------KMRNS 503
            +  L    C++ + EEA   L   G                K GN         KM N 
Sbjct: 565 AYNVLTDALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNE 624

Query: 504 A-------YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                   Y +++  LCK KK++ A+ +L+ M  S  K +   ++ I+ ++  +G  + A
Sbjct: 625 GCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHA 684

Query: 557 YKLWQKLI 564
             L+ ++I
Sbjct: 685 KSLFNEMI 692



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 128/437 (29%), Positives = 202/437 (46%), Gaps = 4/437 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C  G++ DA  L+D M  R  +P       +I G  +  R++ A  +  +M  +G
Sbjct: 290 LIKGLCKEGRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNG 349

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TYN ++ GLC  G++  A  LL+     G  P VIT+  ++       +   A+
Sbjct: 350 CNPDDWTYNSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDAL 408

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               + +   C   L  Y +LI  + K+C +  A E L++M   G +P++V Y S+++  
Sbjct: 409 RVKSNMISSNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGY 468

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G    A+ V   +   G  PN+ TY +L++ L           ++  M E   +P V
Sbjct: 469 CKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGV 528

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y  LI G CK    D A   F  M      PD   YN +  ALCK G   EA   L +
Sbjct: 529 IAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL-V 587

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
             G   +   +TY +L+DG +K G  + A VL  +M+  G   D  T+  L+   C+  +
Sbjct: 588 RKGVVLTK--VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQALCKQKK 645

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + EA+ +L ++   G K    AY ++I  + K  K D A  +   MISS +KP  T ++ 
Sbjct: 646 LNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTV 705

Query: 543 IVKKVADDGMTEEAYKL 559
            +      G  EEA  L
Sbjct: 706 FISSYCKIGQIEEAEHL 722



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 122/449 (27%), Positives = 214/449 (47%), Gaps = 4/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C +G L  A +   ++       D + C  L+ G  R   + KA  +L
Sbjct: 178 DTVTYNTMIMAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLL 237

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M + G   +  +Y +++ GL +   +R A+ L+  M   GC  ++  Y  +++ +   
Sbjct: 238 MMMPLMGCRRNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKE 297

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   A G   +   +G  P + TY  +I+  CK   +  A+ +   M   GC+PD  TY
Sbjct: 298 GRIHDARGLLDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTY 357

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NSL+   C  GK D+A  ++N  ++RG  P  IT+  L++        D   ++   M  
Sbjct: 358 NSLIYGLCG-GKLDEAEELLNGAIARGFTPTVITFTNLINGYCKAERIDDALRVKSNMIS 416

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           ++    +  Y +LIN L K   +  A  + N+M +    P++V Y +++   CK GM+  
Sbjct: 417 SNCKLDLQAYGVLINVLIKKCRLKEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGA 476

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL++  L+    C P   TY +LI GL +   + KAM L  +M E+GI+P  I + TLI 
Sbjct: 477 ALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQ 536

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  + + A  L + + K G      AY ++   LCKS + + A   L   +      
Sbjct: 537 GQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VRKGVVL 593

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               ++++V   +  G T+ A  L +K++
Sbjct: 594 TKVTYTSLVDGFSKAGNTDFAAVLIEKMV 622



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 116/475 (24%), Positives = 214/475 (45%), Gaps = 28/475 (5%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+  +C  G +  A ++  +M      P+     +LI GLI+  ++ KA  ++  M   G
Sbjct: 464 IIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSLIYGLIQDKKLHKAMALITKMQEDG 523

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P  I Y  ++ G CK+ +  +A  L + M  +G  PD   YN +   +  +G+ ++A 
Sbjct: 524 ITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGLTPDEQAYNVLTDALCKSGRAEEAY 583

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            F    +RKG     +TYT L++   K      A  +++ M  EGC  D+ TY+ L+   
Sbjct: 584 SFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADLYTYSVLLQAL 640

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CKQ K ++A+ +++ +   G++ N + Y  ++  +   G  D    + + M  + H P+ 
Sbjct: 641 CKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMIKEGKHDHAKSLFNEMISSGHKPSA 700

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY + I+  CK G ++ A +   +M      PD+VTY+  +      G ++ A   L  
Sbjct: 701 TTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVVTYHIFINGCGHMGYMDRAFSTLKR 760

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMV----------------LYGQMMENGISPD 466
           +  +SC P   TY  L+    K   +    +                L  +MM++G++P 
Sbjct: 761 MVDASCEPNCWTYWLLLKHFLKMSLINAHYIDTSGMWNWIELNTVWQLLERMMKHGLNPT 820

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+ ++I GFC+A ++EEA  LL  +  +        Y ++I   C  K     +  + 
Sbjct: 821 VVTYSSIIAGFCKATRLEEACVLLDHMLGKAISPNEEIYTMLIKCCCDIKLFGKDVSFVT 880

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL---------IEWKVFEKG 572
            MI   ++P    +  ++  + D+G  + A  L+  L         + WK+   G
Sbjct: 881 DMIEFGFQPQLESYHYLIVGLCDEGDYDRAKSLFCDLLGMDYNHNEVAWKILNDG 935



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 107/447 (23%), Positives = 205/447 (45%), Gaps = 4/447 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++ DA  +  +M +    PD     +LI GL    ++++A ++L   
Sbjct: 321 TYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLCG-GKLDEAEELLNGA 379

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P  IT+  ++ G CK  +I  A+ +   M  S C+ D+  Y  ++  +    + 
Sbjct: 380 IARGFTPTVITFTNLINGYCKAERIDDALRVKSNMISSNCKLDLQAYGVLINVLIKKCRL 439

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A     +    G  P ++ YT +I+  CK   +  A+EV   M  EGC P+  TY SL
Sbjct: 440 KEAKETLNEMFANGLAPNVVIYTSIIDGYCKVGMVGAALEVFKLMEHEGCHPNAWTYGSL 499

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    +  K   A+ +I  +   G+ P  I Y TL+     +  +D   ++ ++M +   
Sbjct: 500 IYGLIQDKKLHKAMALITKMQEDGITPGVIAYTTLIQGQCKKHEFDNAFRLFEMMEKNGL 559

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P    YN+L + LCK G   RA  +++ +V K      VTY +++    K G  + A  
Sbjct: 560 TPDEQAYNVLTDALCKSG---RAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAV 616

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +    C   L TY+ L+  L K+  + +A+ +  QM  +G+  + + +  +I    
Sbjct: 617 LIEKMVNEGCKADLYTYSVLLQALCKQKKLNEALSILDQMTVSGVKCNIVAYTIIISEMI 676

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  + + A  L  E+   G+K   + Y + I   CK  +++ A  ++  M      PD  
Sbjct: 677 KEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVTPDVV 736

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +   +      G  + A+   +++++
Sbjct: 737 TYHIFINGCGHMGYMDRAFSTLKRMVD 763



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 68/297 (22%), Positives = 121/297 (40%), Gaps = 16/297 (5%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+      GK   A  L + M      P        I    +I +IE+A  ++  M   G
Sbjct: 671 IISEMIKEGKHDHAKSLFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDG 730

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD----NGKF 238
             PD +TY++ + G    G +  A + L  M  + CEP+  TY  +L+        N  +
Sbjct: 731 VTPDVVTYHIFINGCGHMGYMDRAFSTLKRMVDASCEPNCWTYWLLLKHFLKMSLINAHY 790

Query: 239 KQAIGFW------------KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
               G W            +  ++ G  P ++TY+ +I   CK   +  A  +LD M  +
Sbjct: 791 IDTSGMWNWIELNTVWQLLERMMKHGLNPTVVTYSSIIAGFCKATRLEEACVLLDHMLGK 850

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
             SP+   Y  L+   C    +   V  + +++  G +P   +Y+ L+  L   G +D  
Sbjct: 851 AISPNEEIYTMLIKCCCDIKLFGKDVSFVTDMIEFGFQPQLESYHYLIVGLCDEGDYDRA 910

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             +   +    ++     + IL +GL K G VD        M +++C+ D  +Y+ +
Sbjct: 911 KSLFCDLLGMDYNHNEVAWKILNDGLLKAGHVDFCSQLLAAMDNRHCRIDSESYSML 967



 Score = 86.7 bits (213), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 1/250 (0%)

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           DA+  I  +  + +  +   YN  L SL      + + K+   + +    P   TYN +I
Sbjct: 127 DAIQAIRRVGGKRLVLSPKCYNLALRSLLRFDMTEYMGKLYSHLVQEGLLPDTVTYNTMI 186

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
              CK G +  A   F  +     Q D  T N +L   C+   L +A  LL ++    C 
Sbjct: 187 MAYCKKGSLAIAHRYFCLLRESGMQMDTYTCNALLLGYCRTSDLRKACWLLMMMPLMGCR 246

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
               +Y  LI GL +  C+ +A+VL   M+++G S +   +  LI G C+  ++ +A  L
Sbjct: 247 RNEYSYTILIQGLYEARCVREALVLVFMMVQDGCSLNLHMYTLLIKGLCKEGRIHDARGL 306

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L E+  RG       Y  +I G CKS ++  A+ +  LM  +   PDD  +++++  +  
Sbjct: 307 LDEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALMEQNGCNPDDWTYNSLIYGLC- 365

Query: 550 DGMTEEAYKL 559
            G  +EA +L
Sbjct: 366 GGKLDEAEEL 375


>gi|255548994|ref|XP_002515553.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545497|gb|EEF47002.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 927

 Score =  202 bits (513), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 229/486 (47%), Gaps = 52/486 (10%)

Query: 114 ENDEKTNNKILQNFCSRG-KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +N+E+   K      SRG KL  A+  I I A         FC NL         +E A 
Sbjct: 257 DNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQA---------FCKNL--------DVELAC 299

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ M   G VP   T+  ++G   K+G +  A+ L DEM   G + +V+   T+++  
Sbjct: 300 GLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGY 359

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP-- 290
               K   A+ F+      G  P  +TY +LIE  CK   +A+A ++   M  +   P  
Sbjct: 360 CKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTV 419

Query: 291 --------------------------------DIVTYNSLVNFSCKQGKYDDAVLVINNL 318
                                           +I TYNSL+++ CK+GK  +A  +   +
Sbjct: 420 FIVNSLIRGFLKVESREEASKLFDEAVACDIANIFTYNSLLSWLCKEGKMSEATTLWQKM 479

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L +G+ P  ++YN+++     +G  D    +   M +    P V TY+IL++G  K G  
Sbjct: 480 LDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDT 539

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           + A   F++MV +N  P   TYN  +  LCK G  +EA  +L         P  +TYN++
Sbjct: 540 EYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSI 599

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +DG  K+G +  A+  Y +M E+G+SP+ IT+ TLI GFC+ +  + A+ +  E+  +G 
Sbjct: 600 MDGFIKEGSVSSALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGL 659

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           ++  +AY  +I G CK + ++ A  +   ++     P+  ++++++    +    E A  
Sbjct: 660 ELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALN 719

Query: 559 LWQKLI 564
           L ++++
Sbjct: 720 LQKRML 725



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 129/447 (28%), Positives = 211/447 (47%), Gaps = 1/447 (0%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  G +  A  L   M  +N  P      +LIRG ++++  E+ASK+    V +  + + 
Sbjct: 395 CKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAV-ACDIANI 453

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            TYN ++  LCK G++  A  L  +M   G  P  ++YN+++      G    A   + D
Sbjct: 454 FTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSD 513

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            L  G  P +ITY+IL++   K      A  V D M  E   P   TYN  +N  CK G+
Sbjct: 514 MLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGR 573

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
             +A  ++   + +G  P  +TYN+++      G   +       M E+  SP V TY  
Sbjct: 574 TSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTT 633

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING CK    D A+   N+M +K  + DI  Y  ++   CK+  +  A  L   L    
Sbjct: 634 LINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGG 693

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            SP  + YN+LI G      ME A+ L  +M+  GIS D  T+ TLI G  +  ++  A+
Sbjct: 694 LSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLAL 753

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           DL  E+  +G       Y ++I+GLC   +++ A ++L  M      P+  +++ ++   
Sbjct: 754 DLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGH 813

Query: 548 ADDGMTEEAYKLWQKLIEWKVFEKGTT 574
              G  +EA++L  ++++  +    TT
Sbjct: 814 FKAGNLQEAFRLHNEMLDKGLTPNDTT 840



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 220/483 (45%), Gaps = 38/483 (7%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E T   ++     +G + +A +L D M       +      L++G  + D++  A +   
Sbjct: 314 EGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVVVATTLVKGYCKQDKLVSALEFFD 373

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M  +G  P+ +TY +++   CK G +  A  L  +M      P V   N+++R      
Sbjct: 374 KMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQMKNKNICPTVFIVNSLIRGFLKVE 433

Query: 237 KFKQAIGFWKDQLRKGCP-PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
             ++A   + + +   C    + TY  L+  +CK+  ++ A  +   M  +G +P  V+Y
Sbjct: 434 SREEASKLFDEAV--ACDIANIFTYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSY 491

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NS++   C+QG  D A  V +++L  G++PN ITY+ L+      G  +    + D M +
Sbjct: 492 NSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVD 551

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P+ FTYNI INGLCK G    A +   + V K   P  +TYN+++    KEG ++ 
Sbjct: 552 ENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSS 611

Query: 416 ALQLLHLLNGSSCSPCLITYNT-----------------------------------LID 440
           AL     +  S  SP +ITY T                                   LID
Sbjct: 612 ALTAYREMCESGVSPNVITYTTLINGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALID 671

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  KK  +E A  L+ ++++ G+SP+ + + +LI G+   + +E A++L K +   G   
Sbjct: 672 GFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISC 731

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  +I GL K  ++ +A+ +   M +    PD  +++ ++  +   G  E A K+ 
Sbjct: 732 DLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKIL 791

Query: 561 QKL 563
            ++
Sbjct: 792 AEM 794



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 210/452 (46%), Gaps = 13/452 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   C  GK+++A+ L   M  +   P      ++I G  R   ++ A+ V   M
Sbjct: 455 TYNSLLSWLCKEGKMSEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDM 514

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+ ITY++++ G  K G    A  + D M      P   TYN  +  +   G+ 
Sbjct: 515 LDCGLKPNVITYSILMDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRT 574

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A    K  + KG  P  +TY  +++   K+  ++ A+    +M   G SP+++TY +L
Sbjct: 575 SEAQDMLKKFVEKGFVPVCLTYNSIMDGFIKEGSVSSALTAYREMCESGVSPNVITYTTL 634

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK    D A+ + N + ++G+E +   Y  L+     +   +    +   + +   
Sbjct: 635 INGFCKNNNTDLALKMRNEMRNKGLELDIAAYGALIDGFCKKQDIETASWLFSELLDGGL 694

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP    YN LI+G      ++ A+N   +M+ +    D+ TY T++  L KEG L  AL 
Sbjct: 695 SPNSVIYNSLISGYRNLNNMEAALNLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALD 754

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   ++     P +I Y  LI+GL  KG +E A  +  +M  + I+P+   +  LI G  
Sbjct: 755 LYSEMSAKGIIPDIIIYTVLINGLCGKGQLENAQKILAEMERDSITPNVPIYNALIAGHF 814

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP--- 535
           +A  ++EA  L  E+  +G    ++ Y ++I+G     K+      L+ ++S ++K    
Sbjct: 815 KAGNLQEAFRLHNEMLDKGLTPNDTTYDILING-----KIKGGNSALKSLLSLKFKDGKG 869

Query: 536 -----DDTVFSTIVKKVADDGMTEEAYKLWQK 562
                +      +++K  +  +  EA K+ +K
Sbjct: 870 MKRINEQDSIKKVIEKAVNKYLRPEAQKMIEK 901



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 205/452 (45%), Gaps = 1/452 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           ++D +  N +L ++    KL DA    + +   + +P   F   L+  L++ D I +A +
Sbjct: 171 DSDIRIYNYLLNSYIKANKLNDAIGCFNRLVESDIVPWIKFLNFLLTALVKNDMIYEARE 230

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V + MV+ G   D  T ++M+    K      A     E    G + D   Y+ +++   
Sbjct: 231 VYEKMVLKGVHGDCFTVHIMMRANLKDNNEEEAKKFFLEAKSRGVKLDAAAYSIVIQAFC 290

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            N   + A G  KD   KG  P   T+T +I    KQ  +  A+ + D+M   G   ++V
Sbjct: 291 KNLDVELACGLLKDMRDKGWVPSEGTFTSVIGACVKQGNMVEALRLKDEMVSCGVQMNVV 350

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
              +LV   CKQ K   A+   + +   G  PN +TY  L+      G       +   M
Sbjct: 351 VATTLVKGYCKQDKLVSALEFFDKMNENGPSPNRVTYAVLIEWCCKNGNMAKAYDLYTQM 410

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
              +  PTVF  N LI G  K    + A   F++ V+ +   +I TYN++L  LCKEG +
Sbjct: 411 KNKNICPTVFIVNSLIRGFLKVESREEASKLFDEAVACDI-ANIFTYNSLLSWLCKEGKM 469

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +EA  L   +     +P  ++YN++I G  ++G ++ A  ++  M++ G+ P+ IT+  L
Sbjct: 470 SEATTLWQKMLDKGLAPTKVSYNSMILGHCRQGNLDMAASVFSDMLDCGLKPNVITYSIL 529

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           + G+ +    E A  +   +        +  Y + I+GLCK  +   A  +L+  +   +
Sbjct: 530 MDGYFKNGDTEYAFYVFDRMVDENIVPSDFTYNIKINGLCKVGRTSEAQDMLKKFVEKGF 589

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            P    +++I+     +G    A   ++++ E
Sbjct: 590 VPVCLTYNSIMDGFIKEGSVSSALTAYREMCE 621



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 54/223 (24%), Positives = 95/223 (42%), Gaps = 35/223 (15%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      ++  FC +  +  AS L   +      P+     +LI G   ++ +E A 
Sbjct: 659 LELDIAAYGALIDGFCKKQDIETASWLFSELLDGGLSPNSVIYNSLISGYRNLNNMEAAL 718

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M+  G   D  TY  ++ GL K G++  A+ L  EMS  G  PD+I Y       
Sbjct: 719 NLQKRMLGEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIY------- 771

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                                       T+LI  +C +  +  A ++L +M  +  +P++
Sbjct: 772 ----------------------------TVLINGLCGKGQLENAQKILAEMERDSITPNV 803

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
             YN+L+    K G   +A  + N +L +G+ PN  TY+ L++
Sbjct: 804 PIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILIN 846



 Score = 54.3 bits (129), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 38/130 (29%), Positives = 58/130 (44%), Gaps = 5/130 (3%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D +T   ++      G+L  A  L   M+ +  IPD      LI GL    ++E
Sbjct: 726 GEGISCDLQTYTTLIDGLLKEGRLVLALDLYSEMSAKGIIPDIIIYTVLINGLCGKGQLE 785

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A K+L  M      P+   YN ++ G  K G ++ A  L +EM   G  P+  TY+ ++
Sbjct: 786 NAQKILAEMERDSITPNVPIYNALIAGHFKAGNLQEAFRLHNEMLDKGLTPNDTTYDILI 845

Query: 230 RTMFDNGKFK 239
                NGK K
Sbjct: 846 -----NGKIK 850


>gi|22135795|gb|AAM91084.1| AT4g28010/T13J8_120 [Arabidopsis thaliana]
          Length = 704

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 228/443 (51%), Gaps = 37/443 (8%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+   +++ +   A  VL +M+  G   +   +N+++ GLC+  +   A++LL EM  + 
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PDV +YNT++R   +  + ++A+    +    GC   L+T+ ILI+  CK   +  A+
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
             L +M   G   D+V Y SL+   C  G+ D    + + +L RG  P +ITYNTL+   
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      +I + M E    P V+TY  LI+GLC  G    A+   N M+ K+ +P+ 
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNA 352

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTYN ++  LCK+G++ +A++++ L+      P  ITYN L+ GL  KG +++A  L   
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412

Query: 458 MMENG--ISPDDITHRTLIWGFCRADQVEEAVD----LLKEIG---------------KR 496
           M+++     PD I++  LI G C+ +++ +A+D    L++++G               K 
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472

Query: 497 G--NK-------------MRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           G  NK             +RNS  Y  +I G CK+  +++A  +L  M  S  +P    +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++  +  +G  ++A++L++++
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEM 555



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 216/429 (50%), Gaps = 6/429 (1%)

Query: 120 NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           +N +L+  C   +   A  L+  M R + +PD      +IRG      +EKA ++   M 
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            SG     +T+ +++   CK G++  A+  L EM   G E D++ Y +++R   D G+  
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +    + + L +G  P  ITY  LI   CK   +  A E+ + M   G  P++ TY  L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  C  GK  +A+  +N ++ +  EPN++TYN +++ L   G      +I+++M +    
Sbjct: 325 DGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMV--SKNCQPDIVTYNTVLGALCKEGMLNEAL 417
           P   TYNIL+ GLC  G +D A      M+  S    PD+++YN ++  LCKE  L++AL
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +  LL     +   +T N L++   K G + KAM L+ Q+ ++ I  +  T+  +I GF
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSA--YRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           C+   +  A  LL ++  R ++++ S   Y  ++  LCK   +D A ++ E M      P
Sbjct: 505 CKTGMLNVAKGLLCKM--RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562

Query: 536 DDTVFSTIV 544
           D   F+ ++
Sbjct: 563 DVVSFNIMI 571



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 216/445 (48%), Gaps = 2/445 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC  GK+ +A   +  M       D     +LIRG      +++   +   ++  G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P  ITYN ++ G CK GQ++ A  + + M   G  P+V TY  ++  +   GK K+A+
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 + K   P  +TY I+I ++CK   +A A+E+++ M      PD +TYN L+   
Sbjct: 338 QPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397

Query: 303 CKQGKYDDAVLVINNLL--SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
           C +G  D+A  ++  +L  S   +P+ I+YN L+H L           I D++ E   + 
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T NIL+N   K G V++A+  + Q+       +  TY  ++   CK GMLN A  LL
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  S   P +  YN L+  L K+G +++A  L+ +M  +   PD ++   +I G  +A
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             ++ A  LL  + + G       Y  +I+   K   +D AI   + M+ S ++PD  + 
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
            +++K     G T++  +L +KL++
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVD 662



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 201/423 (47%), Gaps = 2/423 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           NL+  L+R    E A    + M+ +    + ++ + ++    +  +   A  +L  M   
Sbjct: 77  NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G   +V  +N +L+ +  N +  +A+   ++  R    P + +Y  +I   C+   + +A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           +E+ ++M   GCS  +VT+  L++  CK GK D+A+  +  +   G+E + + Y +L+  
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               G  D    + D + E   SP   TYN LI G CK G +  A   F  M+ +  +P+
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           + TY  ++  LC  G   EALQ L+L+      P  +TYN +I+ L K G +  A+ +  
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCK 514
            M +    PD+IT+  L+ G C    ++EA  LL  + K  +       +Y  +IHGLCK
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCK 436

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             ++  A+ + +L++      D    + ++      G   +A +LW+++ + K+     T
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDT 496

Query: 575 LLA 577
             A
Sbjct: 497 YTA 499



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 164/370 (44%), Gaps = 41/370 (11%)

Query: 98  KKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN 157
           K   D  L   D P       T N +++ FC  G+L +AS++ + M  R   P+ +    
Sbjct: 267 KALFDEVLERGDSPCA----ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL  + + ++A + L +M+     P+ +TYN+++  LCK G +  A+ +++ M    
Sbjct: 323 LIDGLCGVGKTKEALQPLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIAR 275
             PD ITYN +L  +   G   +A       L+      P +I+Y  LI  +CK+  + +
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-------------------LVIN 316
           A+++ D +  +  + D VT N L+N + K G  + A+                    +I+
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502

Query: 317 NLLSRGM----------------EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                GM                +P+   YN LL SL   G  D   ++ + M   ++ P
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V ++NI+I+G  K G +  A +    M      PD+ TY+ ++    K G L+EA+   
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622

Query: 421 HLLNGSSCSP 430
             +  S   P
Sbjct: 623 DKMVDSGFEP 632



 Score = 99.0 bits (245), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 142/337 (42%), Gaps = 41/337 (12%)

Query: 113 VENDEKTN----NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           +E DE+ N    N I+   C  G + DA +++++M +R   PD      L+ GL     +
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 169 EKASKVLQIMVMSGGV--PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           ++ASK+L +M+       PD I+YN ++ GLCK  ++  A+ + D +       D +T N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 227 TILRTMFDNGKFKQAIGFWKD--------------------------QLRKGC------- 253
            +L +    G   +A+  WK                            + KG        
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 254 --PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
              P +  Y  L+  +CK+  + +A  + ++M  +   PD+V++N +++ S K G    A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             ++  +   G+ P+  TY+ L++     G  D      D M ++   P     + ++  
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
               G  D+      ++V K+   D     TV+  +C
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 47/209 (22%), Positives = 99/209 (47%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           S S   F  + L+  L +    + A + + +M+  +   + V+ + +L    +      A
Sbjct: 67  SGSSLAFAGSNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFA 126

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             +L L+     +  +  +N L+ GL +     KA+ L  +M  N + PD  ++ T+I G
Sbjct: 127 FGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRG 186

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           FC   ++E+A++L  E+   G       + ++I   CK+ K+D A+  L+ M     + D
Sbjct: 187 FCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEAD 246

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             V++++++   D G  +    L+ +++E
Sbjct: 247 LVVYTSLIRGFCDCGELDRGKALFDEVLE 275


>gi|225423589|ref|XP_002275605.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Vitis vinifera]
          Length = 644

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 241/493 (48%), Gaps = 42/493 (8%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           ++ + T   +++N+ + G      ++ D M R  ++      I + R   +    EKA +
Sbjct: 61  KSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIE 120

Query: 174 VLQIMVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSG---CEPDVITYNTIL 229
           +   MV       T+ ++N ++  + + G    A+    E  V G     P+V+++N ++
Sbjct: 121 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFY-ECGVGGKTNISPNVLSFNLVI 179

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           + M   G   +AI  +++   + C P + TY  L++ +CK+  I  A+ +LD+M IEGC 
Sbjct: 180 KAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCF 239

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P  VT+N L+N  CK+G       +++N+  +G  PN +TYNT+++ L  +G  D    +
Sbjct: 240 PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSL 299

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYG-----------LVDR------------------ 380
           LD M  +   P   TY  LINGL K G           L +R                  
Sbjct: 300 LDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFK 359

Query: 381 ------AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
                 A+  + +MV K CQP+IV Y+ ++  LC+EG L+EA ++L  +    C+P   T
Sbjct: 360 EEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFT 419

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y++LI G  K G  +KA+ ++ +M +N   P++I +  LI G C   ++ EA+ +   + 
Sbjct: 420 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 479

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI--SSRYKPDDTVFSTIVKKVADDGM 552
            RG +    AY  +IHGLC +  V++ +++   M+   S  +PD   ++ +++ +     
Sbjct: 480 GRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNS 539

Query: 553 TEEAYKLWQKLIE 565
              A  L   +++
Sbjct: 540 ISHAIDLLNSMLD 552



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 227/452 (50%), Gaps = 27/452 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +++  C  G +  A ++   MA +   PD F +C  L+ GL + DRI++A  +L  M 
Sbjct: 176 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYC-TLMDGLCKEDRIDEAVLLLDEMQ 234

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           + G  P ++T+N+++ GLCK+G +     L+D M + GC P+ +TYNTI+  +   GK  
Sbjct: 235 IEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLD 294

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A+      +   C P  +TY  LI  + KQ      + +L  +   G   +   Y++L+
Sbjct: 295 KAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLI 354

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +   K+ K ++A+ +   ++ +G +PN + Y+ L+  L   G  D   +IL  M     +
Sbjct: 355 SGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCT 414

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P  FTY+ LI G  K G   +AI  + +M   NC P+ + Y+ ++  LC++G L EA+ +
Sbjct: 415 PNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMM 474

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM--ENGISPDDITHRTLIWGF 477
              + G    P ++ Y+++I GL   G +E  + L+ +M+  E+   PD +T+  L+   
Sbjct: 475 WTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRAL 534

Query: 478 CRADQVEEAVDLLKEIGKRG------------NKMRNSAY----------RLVIHGLCKS 515
           C+ + +  A+DLL  +  RG            N +R               LV+  L K 
Sbjct: 535 CKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR-LHKR 593

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +++  A +++E+M+     P+ + +  I+ ++
Sbjct: 594 QRIVGAAKIIEVMLQKFLPPNASTWERIIPEL 625



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 197/407 (48%), Gaps = 51/407 (12%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C +G +   +KL+D M  +  +P+      +I GL    +++KA  +L  M
Sbjct: 244 TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 303

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V S  VP+ +TY  ++ GL K+G+    + LL  +   G   +   Y+T++  +F   K 
Sbjct: 304 VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKS 363

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+G WK  + KGC P ++ Y+ LI+ +C++  +  A E+L +M  +GC+P+  TY+SL
Sbjct: 364 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 423

Query: 299 VN-----------------------------FS------CKQGKYDDAVLVINNLLSRGM 323
           +                              +S      C+ GK  +A+++  ++L RG+
Sbjct: 424 IKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 483

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIM--NEASHSPTVFTYNILINGLCKYGLVDRA 381
            P+ + Y++++H L + G  +   K+ + M   E+   P V TYNIL+  LCK   +  A
Sbjct: 484 RPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHA 543

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           I+  N M+ + C PD++T N  L AL ++  LN        L            + L+  
Sbjct: 544 IDLLNSMLDRGCNPDLITCNIFLNALREK--LNPPQDGREFL------------DELVVR 589

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           L K+  +  A  +   M++  + P+  T   +I   C+  +V+  +D
Sbjct: 590 LHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIID 636


>gi|297738031|emb|CBI27232.3| unnamed protein product [Vitis vinifera]
          Length = 660

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 133/493 (26%), Positives = 241/493 (48%), Gaps = 42/493 (8%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           ++ + T   +++N+ + G      ++ D M R  ++      I + R   +    EKA +
Sbjct: 77  KSGDSTFYSLIENYANSGDFGTLFQVFDRMKRERRVFIEKNFILVFRAYGKAHLPEKAIE 136

Query: 174 VLQIMVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSG---CEPDVITYNTIL 229
           +   MV       T+ ++N ++  + + G    A+    E  V G     P+V+++N ++
Sbjct: 137 LFGRMVDEFQCRRTVRSFNSVLNVIIQEGLFHRALEFY-ECGVGGKTNISPNVLSFNLVI 195

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           + M   G   +AI  +++   + C P + TY  L++ +CK+  I  A+ +LD+M IEGC 
Sbjct: 196 KAMCKLGLVDRAIEVFREMAIQKCEPDVFTYCTLMDGLCKEDRIDEAVLLLDEMQIEGCF 255

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P  VT+N L+N  CK+G       +++N+  +G  PN +TYNT+++ L  +G  D    +
Sbjct: 256 PSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSL 315

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYG-----------LVDR------------------ 380
           LD M  +   P   TY  LINGL K G           L +R                  
Sbjct: 316 LDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFK 375

Query: 381 ------AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
                 A+  + +MV K CQP+IV Y+ ++  LC+EG L+EA ++L  +    C+P   T
Sbjct: 376 EEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFT 435

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y++LI G  K G  +KA+ ++ +M +N   P++I +  LI G C   ++ EA+ +   + 
Sbjct: 436 YSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHML 495

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI--SSRYKPDDTVFSTIVKKVADDGM 552
            RG +    AY  +IHGLC +  V++ +++   M+   S  +PD   ++ +++ +     
Sbjct: 496 GRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNS 555

Query: 553 TEEAYKLWQKLIE 565
              A  L   +++
Sbjct: 556 ISHAIDLLNSMLD 568



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 123/452 (27%), Positives = 227/452 (50%), Gaps = 27/452 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +++  C  G +  A ++   MA +   PD F +C  L+ GL + DRI++A  +L  M 
Sbjct: 192 NLVIKAMCKLGLVDRAIEVFREMAIQKCEPDVFTYC-TLMDGLCKEDRIDEAVLLLDEMQ 250

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           + G  P ++T+N+++ GLCK+G +     L+D M + GC P+ +TYNTI+  +   GK  
Sbjct: 251 IEGCFPSSVTFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLD 310

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A+      +   C P  +TY  LI  + KQ      + +L  +   G   +   Y++L+
Sbjct: 311 KAVSLLDRMVASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLI 370

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +   K+ K ++A+ +   ++ +G +PN + Y+ L+  L   G  D   +IL  M     +
Sbjct: 371 SGLFKEEKSEEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCT 430

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P  FTY+ LI G  K G   +AI  + +M   NC P+ + Y+ ++  LC++G L EA+ +
Sbjct: 431 PNAFTYSSLIKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMM 490

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM--ENGISPDDITHRTLIWGF 477
              + G    P ++ Y+++I GL   G +E  + L+ +M+  E+   PD +T+  L+   
Sbjct: 491 WTHMLGRGLRPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRAL 550

Query: 478 CRADQVEEAVDLLKEIGKRG------------NKMRNSAY----------RLVIHGLCKS 515
           C+ + +  A+DLL  +  RG            N +R               LV+  L K 
Sbjct: 551 CKQNSISHAIDLLNSMLDRGCNPDLITCNIFLNALREKLNPPQDGREFLDELVVR-LHKR 609

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +++  A +++E+M+     P+ + +  I+ ++
Sbjct: 610 QRIVGAAKIIEVMLQKFLPPNASTWERIIPEL 641



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/407 (26%), Positives = 197/407 (48%), Gaps = 51/407 (12%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C +G +   +KL+D M  +  +P+      +I GL    +++KA  +L  M
Sbjct: 260 TFNVLINGLCKKGDMVRVTKLVDNMFLKGCVPNEVTYNTIINGLCLKGKLDKAVSLLDRM 319

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V S  VP+ +TY  ++ GL K+G+    + LL  +   G   +   Y+T++  +F   K 
Sbjct: 320 VASKCVPNDVTYGTLINGLVKQGRSVDGVHLLSSLEERGHHANEYAYSTLISGLFKEEKS 379

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+G WK  + KGC P ++ Y+ LI+ +C++  +  A E+L +M  +GC+P+  TY+SL
Sbjct: 380 EEAMGLWKKMVEKGCQPNIVVYSALIDGLCREGKLDEAKEILCEMVNKGCTPNAFTYSSL 439

Query: 299 VN-----------------------------FS------CKQGKYDDAVLVINNLLSRGM 323
           +                              +S      C+ GK  +A+++  ++L RG+
Sbjct: 440 IKGFFKTGNSQKAIRVWKEMAKNNCVPNEICYSVLIHGLCEDGKLREAMMMWTHMLGRGL 499

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIM--NEASHSPTVFTYNILINGLCKYGLVDRA 381
            P+ + Y++++H L + G  +   K+ + M   E+   P V TYNIL+  LCK   +  A
Sbjct: 500 RPDVVAYSSMIHGLCNAGSVEVGLKLFNEMLCQESDSQPDVVTYNILLRALCKQNSISHA 559

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           I+  N M+ + C PD++T N  L AL ++  LN        L            + L+  
Sbjct: 560 IDLLNSMLDRGCNPDLITCNIFLNALREK--LNPPQDGREFL------------DELVVR 605

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           L K+  +  A  +   M++  + P+  T   +I   C+  +V+  +D
Sbjct: 606 LHKRQRIVGAAKIIEVMLQKFLPPNASTWERIIPELCKPKKVQAIID 652


>gi|242089061|ref|XP_002440363.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
 gi|241945648|gb|EES18793.1| hypothetical protein SORBIDRAFT_09g030360 [Sorghum bicolor]
          Length = 715

 Score =  201 bits (512), Expect = 6e-49,   Method: Compositional matrix adjust.
 Identities = 123/461 (26%), Positives = 231/461 (50%), Gaps = 18/461 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV- 179
           N ++      G++  A  L   M  +   P+     ++I GL +   ++KA  VLQ M  
Sbjct: 143 NMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFD 202

Query: 180 -------------MSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
                        MSGG   PD +TY++++   CK G+   A  + D M   G  PD  T
Sbjct: 203 KGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYT 262

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y T+L      G            ++ G P     + ILI    K   + +A+    +M 
Sbjct: 263 YRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMR 322

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +G SP++VTY ++++  CK G+ +DAV   + ++S G+ P+ IT+ +L+H L + G W 
Sbjct: 323 QKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWK 382

Query: 345 AVDKI-LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
            V+K+  +++N   H   +F  N +++ LCK G V  A + F+Q++    +PD+V+Y  +
Sbjct: 383 KVEKLSFEMINRGIHPNAIFL-NTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTIL 441

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +   C +G ++E+++LL  +      P  +TY+ L++G  K G ++ A+ LY +M    +
Sbjct: 442 IDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDV 501

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P+ IT+  ++ G   A +V  A +   +I   G ++  + Y +V+ GLC++  VD A++
Sbjct: 502 KPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDEALR 561

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + + + S  ++ +   F+ ++  +   G   +A  L+  ++
Sbjct: 562 MFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAIL 602



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 120/438 (27%), Positives = 215/438 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +LQ    +G+L +A +L+  M+     PD      LI    +I R  +A  +   MV  G
Sbjct: 196 VLQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRG 255

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY  ++ G   +G +     LL  M   G   +   +N ++R    N    +A+
Sbjct: 256 QNPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAM 315

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +  +KG  P ++TYT +I+ +CK   +  A+     M  EG SPDI+T+ SL++  
Sbjct: 316 TAFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGL 375

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G++     +   +++RG+ PN+I  NT++ SL   G         D +      P V
Sbjct: 376 CTIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDV 435

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            +Y ILI+G C  G +D +I    +MVS   +PD VTY+ +L   CK G +++AL L   
Sbjct: 436 VSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYRE 495

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  ITYN ++ GL   G +  A   Y +++++GI     T+  ++ G C    
Sbjct: 496 MFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSF 555

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V+EA+ + + +  +  ++    + ++I GL K  ++  A  +   ++ S   PD  ++  
Sbjct: 556 VDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGL 615

Query: 543 IVKKVADDGMTEEAYKLW 560
           +++   ++G+ EE+ +L+
Sbjct: 616 MIQSHIEEGLLEESDELF 633



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/409 (27%), Positives = 208/409 (50%), Gaps = 26/409 (6%)

Query: 186 DTITYNMMVGGLCKRG--------QIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDN 235
           D  T+ +++   C  G        + R + A +  M+  G  C P+V++YN ++  +F  
Sbjct: 93  DACTFGILIRCFCNVGLLDFALEEESRGSRAAVHMMADDGYNCPPNVLSYNMVINGLFKE 152

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR----------------AIEV 279
           G+  +A   + + L +G PP ++TY  +I+ +CK   + +                A+ +
Sbjct: 153 GEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAVLQQMFDKGQLEEAVRL 212

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L  M+  G  PD+VTY+ L+++ CK G+  +A  + ++++ RG  P++ TY TLLH   +
Sbjct: 213 LKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQNPDAYTYRTLLHGYAT 272

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
           +G    +  +L +M +         +NILI    K   +D+A+ +F +M  K   P++VT
Sbjct: 273 KGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAFIEMRQKGFSPNVVT 332

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y TV+  LCK G + +A+     +     SP +IT+ +LI GL   G  +K   L  +M+
Sbjct: 333 YTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTIGEWKKVEKLSFEMI 392

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
             GI P+ I   T++   C+  +V EA D   +I   G K    +Y ++I G C   K+D
Sbjct: 393 NRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSYTILIDGYCLDGKMD 452

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            +I++L  M+S   +PD+  +S ++     +G  ++A  L++++    V
Sbjct: 453 ESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFSKDV 501



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/397 (27%), Positives = 199/397 (50%), Gaps = 16/397 (4%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI---------------- 228
           P+ ++YNM++ GL K G++  A  L  EM   G  P+++TYN++                
Sbjct: 137 PNVLSYNMVINGLFKEGEVDKAYTLFHEMLGQGFPPNIVTYNSVIDGLCKAQAMDKAEAV 196

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L+ MFD G+ ++A+   K     G  P ++TY++LI+  CK      A  + D M   G 
Sbjct: 197 LQQMFDKGQLEEAVRLLKKMSGGGLQPDVVTYSLLIDYYCKIGRCTEARNIFDSMVRRGQ 256

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +PD  TY +L++    +G   D   ++  ++  G+      +N L+ +       D    
Sbjct: 257 NPDAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMT 316

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
               M +   SP V TY  +I+ LCK G V+ A++ F+QMVS+   PDI+T+ +++  LC
Sbjct: 317 AFIEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLC 376

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G   +  +L   +      P  I  NT++D L K+G + +A   + Q++  G+ PD +
Sbjct: 377 TIGEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVV 436

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           ++  LI G+C   +++E++ LL  +   G +  N  Y  +++G CK+ +VD A+ +   M
Sbjct: 437 SYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREM 496

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            S   KP+   ++ I+  +   G    A + + K+++
Sbjct: 497 FSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVD 533



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 112/447 (25%), Positives = 210/447 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L  + ++G L D   L+ +M +     + H    LIR   + + ++KA    
Sbjct: 259 DAYTYRTLLHGYATKGALVDMHDLLALMIQDGIPLEDHVFNILIRAYAKNETLDKAMTAF 318

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ +TY  ++  LCK G++  A++   +M   G  PD+IT+ +++  +   
Sbjct: 319 IEMRQKGFSPNVVTYTTVIDILCKAGRVEDAVSHFSQMVSEGLSPDIITFTSLIHGLCTI 378

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G++K+      + + +G  P  I    +++ +CK+  +  A +  D +   G  PD+V+Y
Sbjct: 379 GEWKKVEKLSFEMINRGIHPNAIFLNTIMDSLCKEGRVLEAHDFFDQIIHVGVKPDVVSY 438

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L++  C  GK D+++ ++  ++S G+ P+++TY+ LL+     G  D    +   M  
Sbjct: 439 TILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDALALYREMFS 498

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TYNI+++GL   G V  A   + ++V    Q  I TYN VLG LC+   ++E
Sbjct: 499 KDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGLCENSFVDE 558

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL++   L        + T+N +I GL K G +  A  L+  ++ +G+ PD I +  +I 
Sbjct: 559 ALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDAIIYGLMIQ 618

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
                  +EE+ +L   + K G    +     ++  L +   V  A   L  +    Y  
Sbjct: 619 SHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTKIDEKEYSV 678

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQK 562
           + +    ++  V++    +E   L +K
Sbjct: 679 EASTAVLLISIVSERKYQKEVKFLPEK 705



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 57/258 (22%), Positives = 115/258 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  +   ++  +C  GK+ ++ KL+  M      PD      L+ G  +  R++ A 
Sbjct: 431 VKPDVVSYTILIDGYCLDGKMDESIKLLGRMVSIGLRPDNVTYSALLNGYCKNGRVDDAL 490

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M      P+ ITYN+++ GL   G++ +A     ++  SG +  + TYN +L  +
Sbjct: 491 ALYREMFSKDVKPNAITYNIILHGLFHAGRVVAAREFYMKIVDSGIQLGINTYNIVLGGL 550

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            +N    +A+  ++    K     + T+ I+I  + K   I  A  +   +   G  PD 
Sbjct: 551 CENSFVDEALRMFQGLRSKEFQLEVRTFNIMIVGLLKVGRIGDAKSLFSAILPSGLVPDA 610

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + Y  ++    ++G  +++  +  ++   G   NS T N ++  L  +G        L  
Sbjct: 611 IIYGLMIQSHIEEGLLEESDELFLSMEKNGCTANSRTLNAIVRKLLEKGDVRRAGTYLTK 670

Query: 353 MNEASHSPTVFTYNILIN 370
           ++E  +S    T  +LI+
Sbjct: 671 IDEKEYSVEASTAVLLIS 688


>gi|297832318|ref|XP_002884041.1| binding protein [Arabidopsis lyrata subsp. lyrata]
 gi|297329881|gb|EFH60300.1| binding protein [Arabidopsis lyrata subsp. lyrata]
          Length = 874

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 135/468 (28%), Positives = 224/468 (47%), Gaps = 30/468 (6%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ +FC  G+  D+ KL++ M     +PD     + I  L +  ++  AS++   M +
Sbjct: 221 NTIVSSFCREGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280

Query: 181 SGGV----PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
              +    P++ITYN+M+ G CK G +  A  L + +  +     + +YN  L+ +  +G
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHG 340

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           KF +A    K  + KG  P + +Y IL++ +CK   ++ A  ++  M   G SPD VTY 
Sbjct: 341 KFIEAETVLKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYG 400

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L++  C  GK D A  ++  ++     PN+ T N LLHSL + G     +++L  MNE 
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEK 460

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAI------------------NSF-----NQMVSKNC 393
            +     T NI+++GLC  G +D+AI                  NS+     + ++  NC
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD++TY+T+L  LCK G   EA  L   + G    P  + YN  I    K+G +  A  
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFR 580

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +   M + G      T+ +LI G    +Q+ E   L+ E+ ++G       Y   I  LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLC 640

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVK---KVADDGMTEEAYK 558
           +  KV+ A  +L+ M+     P+   F  ++    KV D  M +E ++
Sbjct: 641 EGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFE 688



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 132/457 (28%), Positives = 223/457 (48%), Gaps = 14/457 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+ FC  G L DA  L + +   + +         ++GL+R  +  +A  VL+ M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQM 352

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P   +YN+++ GLCK G +  A  ++  M  +G  PD +TY  +L      GK 
Sbjct: 353 IDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKV 412

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    ++ +R  C P   T  IL+  +     I+ A E+L  M  +G   D VT N +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNII 472

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  C  G+ D A+ ++  +   G        +  L +LG+      +  + D + E + 
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHG--------SAALGNLGN----SYIGLVDDSLIENNC 520

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TY+ L+NGLCK G    A   F +M+ +  QPD + YN  +   CK+G ++ A +
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCKQGKISSAFR 580

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +    C   L TYN+LI GL  K  + +   L  +M E GISP+  T+ T I   C
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAIQYLC 640

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              +VE+A +LL E+ ++       +++ +I   CK    DMA +V E  +S   + +  
Sbjct: 641 EGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAVSICGQKEG- 699

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           ++S +  ++   G   +A +L + +++ + FE GT L
Sbjct: 700 LYSLMFNELLAAGQLLKATELLEAVLD-RGFELGTFL 735



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 126/493 (25%), Positives = 222/493 (45%), Gaps = 47/493 (9%)

Query: 79  SSESH--VLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDA 136
           S ESH   LA    +  + +  K H            E  E+ +N IL +   + KL+  
Sbjct: 31  SEESHGISLAATPTMACILVRAKMH------------EEIEELHNLILSSSIQKTKLSSL 78

Query: 137 SKLIDIMARRNQI----PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
             ++ I A+ N I    P F F    +R     ++                 P    YN+
Sbjct: 79  LSVVSIFAKSNHIDKAFPQFQF----VRSRFPENK-----------------PGIYLYNV 117

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++    +  ++     L  +M + G  P+  T+N ++R + D+     A   + +   KG
Sbjct: 118 LLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARELFDEMPEKG 177

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
           C P   T+ IL+   CK     + +E+L+ M   G  P+ V YN++V+  C++G+ DD+ 
Sbjct: 178 CKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFCREGRNDDSE 237

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH----SPTVFTYNIL 368
            ++  +   G+ P+ +T+N+ + +L   G      +I   M    +     P   TYN++
Sbjct: 238 KLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPRPNSITYNLM 297

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           + G CK GL++ A   F  +   +    + +YN  L  L + G   EA  +L  +     
Sbjct: 298 LKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETVLKQMIDKGI 357

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P + +YN L+DGL K G +  A  + G M  NG+SPD +T+  L+ G+C   +V+ A  
Sbjct: 358 GPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCSVGKVDAAKS 417

Query: 489 LLKEIGKRGNKMRNSAY--RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           LL+E+  R N + N AY   +++H L    ++  A ++L  M    Y  D    + IV  
Sbjct: 418 LLQEM-MRNNCLPN-AYTCNILLHSLWNMGRISEAEELLRKMNEKGYGLDTVTCNIIVDG 475

Query: 547 VADDGMTEEAYKL 559
           +   G  ++A ++
Sbjct: 476 LCGSGELDKAIEI 488



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 118/421 (28%), Positives = 192/421 (45%), Gaps = 30/421 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   +L  +CS GK+  A  L+  M R N +P+ + C  L+  L  + RI +A 
Sbjct: 392 VSPDAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAE 451

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG--------------- 217
           ++L+ M   G   DT+T N++V GLC  G++  AI ++  M V G               
Sbjct: 452 ELLRKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLV 511

Query: 218 --------CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
                   C PD+ITY+T+L  +   G+F +A   + + + +   P  + Y I I   CK
Sbjct: 512 DDSLIENNCLPDLITYSTLLNGLCKAGRFAEAKTLFAEMMGEKLQPDSLAYNIFIHHFCK 571

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
           Q  I+ A  VL DM  +GC   + TYNSL+     + +  +   +++ +  +G+ PN  T
Sbjct: 572 QGKISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICT 631

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YNT +  L   G  +    +LD M + + +P VF++  LI   CK    D A   F   V
Sbjct: 632 YNTAIQYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVFETAV 691

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           S   Q + + Y+ +   L   G L +A +LL  +           Y  L+  L KK  +E
Sbjct: 692 SICGQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELE 750

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL------LKEIGKRGNKMRNS 503
            A  +  +M++ G   D      +I G  +    +EA +       +  +G+  NK+  +
Sbjct: 751 VASGILHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMMEMASVGEVANKVDPN 810

Query: 504 A 504
           A
Sbjct: 811 A 811



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 97/351 (27%), Positives = 171/351 (48%), Gaps = 4/351 (1%)

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
           +P +  YN +L +     + +     +KD +  G  P   T+ +LI  +C    +  A E
Sbjct: 109 KPGIYLYNVLLESCIRERRVEFVSWLYKDMVLCGISPETYTFNLLIRALCDSSCVDAARE 168

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           + D+M  +GC P+  T+  LV   CK G  D  + ++N++ S G+ PN + YNT++ S  
Sbjct: 169 LFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNSMESFGVLPNKVVYNTIVSSFC 228

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC----Q 394
             G  D  +K+++ M E    P + T+N  I+ LCK G V  A   F+ M         +
Sbjct: 229 REGRNDDSEKLVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMELDEYLGLPR 288

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+ +TYN +L   CK G+L +A  L   +  +     L +YN  + GL + G   +A  +
Sbjct: 289 PNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLVSLQSYNIWLQGLVRHGKFIEAETV 348

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             QM++ GI P   ++  L+ G C+   + +A  ++  + + G       Y  ++HG C 
Sbjct: 349 LKQMIDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVSPDAVTYGCLLHGYCS 408

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             KVD A  +L+ M+ +   P+    + ++  + + G   EA +L +K+ E
Sbjct: 409 VGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWNMGRISEAEELLRKMNE 459



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 65/280 (23%), Positives = 113/280 (40%), Gaps = 36/280 (12%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  ++ D    N  + +FC +GK++ A +++  M ++                       
Sbjct: 552 GEKLQPDSLAYNIFIHHFCKQGKISSAFRVLKDMEKKG---------------------- 589

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
              K L+            TYN ++ GL  + QI     L+DEM   G  P++ TYNT +
Sbjct: 590 -CHKSLE------------TYNSLILGLGIKNQIFEIHGLMDEMREKGISPNICTYNTAI 636

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           + + + GK + A     + ++K   P + ++  LI   CK      A EV  + A+  C 
Sbjct: 637 QYLCEGGKVEDATNLLDEMMQKNIAPNVFSFKYLIGAFCKVPDFDMAQEVF-ETAVSICG 695

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
                Y+ + N     G+   A  ++  +L RG E  +  Y  L+ SL  +   +    I
Sbjct: 696 QKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVVSLCKKDELEVASGI 755

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           L  M +  +         +I+GL K G    A N   +M+
Sbjct: 756 LHKMIDKGYGFDPAALMPVIDGLGKMGNKKEANNFAEKMM 795


>gi|242094006|ref|XP_002437493.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
 gi|241915716|gb|EER88860.1| hypothetical protein SORBIDRAFT_10g028090 [Sorghum bicolor]
          Length = 1039

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 126/449 (28%), Positives = 219/449 (48%), Gaps = 4/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +C  G L  A +   ++       D + C  L+ G  R   + KA  +L
Sbjct: 182 DTVTYNTMIMAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLL 241

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M + G   +  +Y +++ GLC+   +R A+ LL  M   GC P++ TY  ++R +   
Sbjct: 242 MMMPLMGCRRNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKE 301

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   A     +  R+G  P + TY  +I+  CK   +  A+ +   M   GC+PD  TY
Sbjct: 302 GRIHDARVLLDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTY 361

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NSL++  C  GK D+A  ++N  ++RG  P  IT+  +++        D   ++  IM  
Sbjct: 362 NSLIHGLCG-GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMIS 420

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +     +  Y +LI+ L K   +  A ++ N++ +    P++V Y +++ A CK G +  
Sbjct: 421 SKCKLDLQAYGVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGA 480

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL++  L     C P   TY++LI GL +   + KAM L  +M E+GI+P  IT+ TLI 
Sbjct: 481 ALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQ 540

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  + + A  L + + + G      AY ++   LCKS + + A   L   +      
Sbjct: 541 GQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL---VKKGVVL 597

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               ++++V   +  G TE A  L +K++
Sbjct: 598 TKVTYTSLVDGFSKAGNTEFAAALIEKMV 626



 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 214/447 (47%), Gaps = 43/447 (9%)

Query: 155 CINL-IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG------------------ 195
           C NL +R L+R D  E   K+   +V  G +PDT+TYN M+                   
Sbjct: 150 CYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMIMAYCKEGSLAIAHRYFRLL 209

Query: 196 -----------------GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                            G C+ G +R A  LL  M + GC  +  +Y  +++ + +    
Sbjct: 210 RESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCRRNEYSYTILIQGLCETRCV 269

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+      L+ GC P L TYT+LI  +CK+  I  A  +LD+M   G  P + TYN++
Sbjct: 270 REALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLLDEMPRRGVVPSVWTYNAM 329

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA-- 356
           ++  CK G+  DA+ +   +   G  P+  TYN+L+H L    C    D+  +++N A  
Sbjct: 330 IDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGL----CGGKPDEAEELLNGAIA 385

Query: 357 -SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SPTV T+  +ING CK   +D A+   + M+S  C+ D+  Y  ++  L K+  L E
Sbjct: 386 RGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAYGVLISVLIKKHRLKE 445

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A   L+ +  +  SP ++ Y ++ID   K G +  A+ ++      G  P+  T+ +LI+
Sbjct: 446 AKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIY 505

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G  +  ++ +A+ L+ ++ + G       Y  +I G CK  + D A ++ E+M  +   P
Sbjct: 506 GLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTP 565

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQK 562
           D+  ++ +   +   G  EEAY    K
Sbjct: 566 DEQAYNVLTDALCKSGRAEEAYSFLVK 592



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 120/475 (25%), Positives = 217/475 (45%), Gaps = 28/475 (5%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+  +C  GK+  A ++  +       P+     +LI GLI+  ++ KA  ++  M   G
Sbjct: 468 IIDAYCKVGKVGAALEVFKLTEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG 527

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P  ITY  ++ G CK+ +  +A  L + M  +G  PD   YN +   +  +G+ ++A 
Sbjct: 528 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAY 587

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            F    ++KG     +TYT L++   K      A  +++ M  EGC  D  TY+ L+   
Sbjct: 588 SFL---VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQAL 644

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CKQ K ++A+ +++ +  RG++ N + Y  ++  +   G  D    + + M  + H P+ 
Sbjct: 645 CKQKKLNEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSA 704

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY + I+  CK G ++ A +   +M      PD+VTYN  +      G ++ A   L  
Sbjct: 705 ITYTVFISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKR 764

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMV----------------LYGQMMENGISPD 466
           +  +SC P   TY  L+    K        V                L  +M+++G++P 
Sbjct: 765 MIDASCEPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPT 824

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+ ++I GFC+A ++EEA  LL  +  +        Y ++I   C  K  + A   + 
Sbjct: 825 AVTYSSIIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVT 884

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE---------WKVFEKG 572
            MI   ++P    +  ++  + D+G  ++A  L+  L+E         WK+   G
Sbjct: 885 NMIECGFQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDG 939



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 195/455 (42%), Gaps = 19/455 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++Q  C + +  +A +L ++M +    PD      L   L +  R E+A   L   
Sbjct: 534 TYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFL--- 590

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G V   +TY  +V G  K G    A AL+++M   GC+ D  TY+ +L+ +    K 
Sbjct: 591 VKKGVVLTKVTYTSLVDGFSKAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKL 650

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+        +G    ++ YTI+I ++ K+     A  + ++M   G  P  +TY   
Sbjct: 651 NEALSILDQMTLRGVKGNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVF 710

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G+ ++A  +I  +   G+ P+ +TYN  ++  G  G  D     L  M +AS 
Sbjct: 711 ISSYCKIGRIEEAGHLIGEMERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMIDASC 770

Query: 359 SPTVFTYNILINGLCKYGL----------------VDRAINSFNQMVSKNCQPDIVTYNT 402
            P  +TY +L+    K  L                +D       +MV     P  VTY++
Sbjct: 771 EPNYWTYWLLLKHFLKMSLANAHYVDTSGMWNWIKLDTVWQLLERMVKHGLNPTAVTYSS 830

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++   CK   L EA  LL  + G   SP    Y  LI         EKA      M+E G
Sbjct: 831 IIAGFCKATRLEEACVLLDHMLGKDISPNEEIYTMLIKCCCDIKLFEKAASFVTNMIECG 890

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             P   ++  LI G C     ++A  L  ++ +        A++++  GL K+  VD+  
Sbjct: 891 FQPHLESYHYLITGLCDEGDYDKAKALFCDLLEMDYNHNEVAWKILNDGLLKAGHVDICS 950

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           Q+L  M +   + D   +S +   + +     E+Y
Sbjct: 951 QLLSAMENRHCRIDSETYSMVTNNIHEASGMYESY 985



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 128/517 (24%), Positives = 212/517 (41%), Gaps = 68/517 (13%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E +   ++Q  C    + +A  L+ +M +    P+ H    LIRGL +  RI  A  +L
Sbjct: 252 NEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVLL 311

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G VP   TYN M+ G CK G+++ A+ +   M  +GC PD  TYN+++  +   
Sbjct: 312 DEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC-G 370

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV---------------- 279
           GK  +A       + +G  P +IT+T +I   CK   I  A+ V                
Sbjct: 371 GKPDEAEELLNGAIARGFSPTVITFTNIINGYCKAEKIDDALRVKSIMISSKCKLDLQAY 430

Query: 280 -------------------LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
                              L+++   G SP++V Y S+++  CK GK   A+ V      
Sbjct: 431 GVLISVLIKKHRLKEAKDTLNEIFANGLSPNVVIYTSIIDAYCKVGKVGAALEVFKLTEH 490

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G  PN+ TY++L++ L           ++  M E   +P V TY  LI G CK    D 
Sbjct: 491 EGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDN 550

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-------------HLLNGSS 427
           A   F  M      PD   YN +  ALCK G   EA   L              L++G S
Sbjct: 551 AFRLFEMMEQNGLTPDEQAYNVLTDALCKSGRAEEAYSFLVKKGVVLTKVTYTSLVDGFS 610

Query: 428 -------------------CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
                              C     TY+ L+  L K+  + +A+ +  QM   G+  + +
Sbjct: 611 KAGNTEFAAALIEKMVNEGCKADSHTYSVLLQALCKQKKLNEALSILDQMTLRGVKGNIV 670

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            +  +I    +  + + A  +  E+   G+K     Y + I   CK  +++ A  ++  M
Sbjct: 671 AYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAITYTVFISSYCKIGRIEEAGHLIGEM 730

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +   PD   ++  +      G  + A+   +++I+
Sbjct: 731 ERNGVAPDVVTYNVFINGCGHMGYMDCAFSTLKRMID 767



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 70/250 (28%), Positives = 118/250 (47%), Gaps = 1/250 (0%)

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           DA+  I     + +  +   YN  L SL      + + K+   + +    P   TYN +I
Sbjct: 131 DAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMI 190

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
              CK G +  A   F  +     + D  T N +L   C+ G L +A  LL ++    C 
Sbjct: 191 MAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCR 250

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
               +Y  LI GL +  C+ +A+VL   M+++G SP+  T+  LI G C+  ++ +A  L
Sbjct: 251 RNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVL 310

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L E+ +RG       Y  +I G CKS ++  A+ +  LM  +   PDD  +++++  +  
Sbjct: 311 LDEMPRRGVVPSVWTYNAMIDGYCKSGRLKDALGIKTLMEGNGCNPDDWTYNSLIHGLC- 369

Query: 550 DGMTEEAYKL 559
            G  +EA +L
Sbjct: 370 GGKPDEAEEL 379



 Score = 46.6 bits (109), Expect = 0.038,   Method: Compositional matrix adjust.
 Identities = 36/184 (19%), Positives = 75/184 (40%), Gaps = 35/184 (19%)

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A+Q +    G   +     YN  +  L +    E    LY Q+++ G+ PD +T+ T+I
Sbjct: 131 DAIQAIRRAGGKRLALSPKCYNLALRSLLRFDMTEHMGKLYSQLVQEGLLPDTVTYNTMI 190

Query: 475 W-----------------------------------GFCRADQVEEAVDLLKEIGKRGNK 499
                                               G+CR   + +A  LL  +   G +
Sbjct: 191 MAYCKEGSLAIAHRYFRLLRESGMEMDTYTCNALLLGYCRTGDLRKACWLLMMMPLMGCR 250

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
               +Y ++I GLC+++ V  A+ +L +M+     P+   ++ +++ +  +G   +A  L
Sbjct: 251 RNEYSYTILIQGLCETRCVREALVLLLMMLQDGCSPNLHTYTLLIRGLCKEGRIHDARVL 310

Query: 560 WQKL 563
             ++
Sbjct: 311 LDEM 314


>gi|255572426|ref|XP_002527150.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223533489|gb|EEF35232.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 874

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 129/453 (28%), Positives = 230/453 (50%), Gaps = 14/453 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L  FC  G L +A  L+D M R     +       + GLIR  ++ +A  VL+ M+  G
Sbjct: 297 MLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIG 356

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  +YN+++ GLCK G +  A  L+  M  +G  PD +TY+T+L      GK  +A 
Sbjct: 357 IEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEAN 416

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               + +   C P   T  +L+  + K+  I+ A  +L  M  +G   D VT N ++N  
Sbjct: 417 NLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINAL 476

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G+ D A+ ++N + + G        +  L +LG+      +  + D ++    +P +
Sbjct: 477 CNNGQLDKAIEIVNGMWTHG--------SAALGNLGN----SFIGLVDDTISGKKCTPDL 524

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ +I+GLCK G +D A   F +M+SK  QPD   Y+T + + C+EG ++ A Q+L  
Sbjct: 525 VTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAIYDTFIHSFCREGKISSAFQVLKD 584

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +    C+  L TYN+LI GL  K  + +   L  +M E G+SPD  T+  ++   C   +
Sbjct: 585 MEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGR 644

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + +A  +L E+ ++G     S++R++I   CK+     + +V E+ ++      + +++ 
Sbjct: 645 INDAPSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVFEIALNV-CGHKEALYTL 703

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +  ++   G   EA +L++  ++ + F+ G  L
Sbjct: 704 MFNELLVGGKVAEAKELFETALD-RSFDIGNFL 735



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 141/516 (27%), Positives = 242/516 (46%), Gaps = 64/516 (12%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKA 171
           V  +  T N ++   C  G L DA +L D M  R   P +F F I L+RG  R     K 
Sbjct: 143 VSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGI-LVRGYCRAGLASKG 201

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            ++L  M   G +P+ + YN ++   CK G+   A  L+D+M   G  P V T+N+ +  
Sbjct: 202 LELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRISA 261

Query: 232 MFDNGKFKQAIGFWKD-QLRK--GCP-PYLITYTILIEQVCKQ----------------- 270
           +  +GK  +A   ++D Q+ +  G P P +ITY +++   CK+                 
Sbjct: 262 LCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRNA 321

Query: 271 ------------CGIAR------AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
                        G+ R      A  VL +M   G  PDI +YN +++  CK G   DA 
Sbjct: 322 NFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDAR 381

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
           +++  ++  G+ P+++TY+TLLH   S+G     + +L  M   + SP  +T N+L++ L
Sbjct: 382 MLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHSL 441

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH----------- 421
            K G +  A N   +M  K    D VT N ++ ALC  G L++A+++++           
Sbjct: 442 WKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSAALG 501

Query: 422 ------------LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
                        ++G  C+P L+TY+T+I GL K G ++ A   + +MM  G+ PD   
Sbjct: 502 NLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPDSAI 561

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + T I  FCR  ++  A  +LK++ KRG       Y  +I GL    ++     +++ M 
Sbjct: 562 YDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLIDEMR 621

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                PD   ++ ++  + + G   +A  +  ++++
Sbjct: 622 EKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQ 657



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/443 (26%), Positives = 211/443 (47%), Gaps = 30/443 (6%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P  +    L++  IR +R+E  S + + MV++   P+  T+N+++G LC  G +  A  L
Sbjct: 110 PSIYLYNVLLKSCIRENRVELVSWLYKDMVLARVSPEAYTFNLLIGLLCDSGHLEDAREL 169

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
            D+M   GCEP+  T+  ++R     G   + +         G  P  + Y  LI   CK
Sbjct: 170 FDKMPARGCEPNEFTFGILVRGYCRAGLASKGLELLGQMRTMGILPNNVLYNTLISSFCK 229

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL---SRGM-EP 325
           +     A +++D M  +G  P + T+NS ++  C  GK  +A  +  ++      G+  P
Sbjct: 230 EGKTHDAEKLVDKMREDGLVPHVETFNSRISALCGSGKILEASRIFRDMQIDEELGLPHP 289

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N ITY  +L      G  +    ++D M   ++   + +YNI + GL + G +  A    
Sbjct: 290 NVITYKLMLMGFCKEGMLEEAKTLVDTMKRNANFINLESYNIWLLGLIRNGKLLEAWIVL 349

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            +M+    +PDI +YN V+  LCK GML++A  L+ L+  +   P  +TY+TL+ G   K
Sbjct: 350 KEMLGIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILPDTVTYSTLLHGYCSK 409

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G + +A  L  +M+ N  SP+  T   L+    +  ++ EA +LL+++ ++G  +     
Sbjct: 410 GKVFEANNLLHEMISNNCSPNTYTCNVLLHSLWKEGRISEAENLLQKMNEKGYGVDTVTC 469

Query: 506 RLVIHGLCKSKKVDMAIQVLELMIS-----------------------SRYKPDDTVFST 542
            ++I+ LC + ++D AI+++  M +                        +  PD   +ST
Sbjct: 470 NIIINALCNNGQLDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLVTYST 529

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           I+  +   G  ++A K   K IE
Sbjct: 530 IISGLCKAGRLDDAKK---KFIE 549



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 213/486 (43%), Gaps = 73/486 (15%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +E D  + N ++   C  G L+DA  L+ +M R   +P                   
Sbjct: 354 GIGIEPDIYSYNIVMDGLCKNGMLSDARMLMGLMIRNGILP------------------- 394

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
                           DT+TY+ ++ G C +G++  A  LL EM  + C P+  T N +L
Sbjct: 395 ----------------DTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLL 438

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-- 287
            +++  G+  +A    +    KG     +T  I+I  +C    + +AIE+++ M   G  
Sbjct: 439 HSLWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEIVNGMWTHGSA 498

Query: 288 ---------------------CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
                                C+PD+VTY+++++  CK G+ DDA      ++S+G++P+
Sbjct: 499 ALGNLGNSFIGLVDDTISGKKCTPDLVTYSTIISGLCKAGRLDDAKKKFIEMMSKGLQPD 558

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK-------YGLVD 379
           S  Y+T +HS    G   +  ++L  M +   + T+ TYN LI GL         YGL+D
Sbjct: 559 SAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELYGLID 618

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
                  +M  K   PD+ TYN +L  LC+ G +N+A  +L  +     SP + ++  LI
Sbjct: 619 -------EMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILI 671

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
                K C  KA     ++  N     +  +  +        +V EA +L +    R   
Sbjct: 672 KAFC-KACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFD 730

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           + N  Y+ +I  LCK +K++ A  VL  +I   Y+ D   F  ++      G    A +L
Sbjct: 731 IGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADEL 790

Query: 560 WQKLIE 565
            ++++E
Sbjct: 791 AERMME 796



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 178/408 (43%), Gaps = 41/408 (10%)

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCE--PDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           +V  L K G    AI+    +  +  E  P +  YN +L++     + +     +KD + 
Sbjct: 81  LVTVLAKSGFFNKAISHFKSLRSNFPEKQPSIYLYNVLLKSCIRENRVELVSWLYKDMVL 140

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
               P   T+ +LI  +C    +  A E+ D M   GC P+  T+  LV   C+ G    
Sbjct: 141 ARVSPEAYTFNLLIGLLCDSGHLEDARELFDKMPARGCEPNEFTFGILVRGYCRAGLASK 200

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
            + ++  + + G+ PN++ YNTL+ S    G     +K++D M E    P V T+N  I+
Sbjct: 201 GLELLGQMRTMGILPNNVLYNTLISSFCKEGKTHDAEKLVDKMREDGLVPHVETFNSRIS 260

Query: 371 GLCKYGLVDRAINSFNQMVSKN----CQPDIVTYNTVLGALCKEGMLNEALQLLHLLN-- 424
            LC  G +  A   F  M          P+++TY  +L   CKEGML EA  L+  +   
Sbjct: 261 ALCGSGKILEASRIFRDMQIDEELGLPHPNVITYKLMLMGFCKEGMLEEAKTLVDTMKRN 320

Query: 425 ---------------------------------GSSCSPCLITYNTLIDGLAKKGCMEKA 451
                                            G    P + +YN ++DGL K G +  A
Sbjct: 321 ANFINLESYNIWLLGLIRNGKLLEAWIVLKEMLGIGIEPDIYSYNIVMDGLCKNGMLSDA 380

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
            +L G M+ NGI PD +T+ TL+ G+C   +V EA +LL E+             +++H 
Sbjct: 381 RMLMGLMIRNGILPDTVTYSTLLHGYCSKGKVFEANNLLHEMISNNCSPNTYTCNVLLHS 440

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           L K  ++  A  +L+ M    Y  D    + I+  + ++G  ++A ++
Sbjct: 441 LWKEGRISEAENLLQKMNEKGYGVDTVTCNIIINALCNNGQLDKAIEI 488



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 133/315 (42%), Gaps = 19/315 (6%)

Query: 67  IDRVNEVDQDEWSSESHVLA-VNKKLRGL---TITKKSHDPSLPSSDGPFVENDEKTNNK 122
           +D+  E+    W+  S  L  +     GL   TI+ K   P L             T + 
Sbjct: 482 LDKAIEIVNGMWTHGSAALGNLGNSFIGLVDDTISGKKCTPDLV------------TYST 529

Query: 123 ILQNFCSRGKLTDASK-LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           I+   C  G+L DA K  I++M++  Q PD       I    R  +I  A +VL+ M   
Sbjct: 530 IISGLCKAGRLDDAKKKFIEMMSKGLQ-PDSAIYDTFIHSFCREGKISSAFQVLKDMEKR 588

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G      TYN ++ GL  + QI     L+DEM   G  PDV TYN +L  + + G+   A
Sbjct: 589 GCNKTLQTYNSLILGLGSKNQIFELYGLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDA 648

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
                + L+KG  P + ++ ILI+  CK C    + EV  ++A+  C      Y  + N 
Sbjct: 649 PSVLDEMLQKGISPNISSFRILIKAFCKACDFKASHEVF-EIALNVCGHKEALYTLMFNE 707

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
               GK  +A  +    L R  +  +  Y  L+  L      +A   +L  + +  +   
Sbjct: 708 LLVGGKVAEAKELFETALDRSFDIGNFLYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFD 767

Query: 362 VFTYNILINGLCKYG 376
             ++  +I+G  K G
Sbjct: 768 PASFMPVIDGFGKMG 782



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 53/248 (21%), Positives = 102/248 (41%), Gaps = 34/248 (13%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    +  + +FC  GK++ A +++  M +R          +LI GL   ++I +  
Sbjct: 555 LQPDSAIYDTFIHSFCREGKISSAFQVLKDMEKRGCNKTLQTYNSLILGLGSKNQIFELY 614

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT- 231
            ++  M   G  PD  TYN M+  LC+ G+I  A ++LDEM   G  P++ ++  +++  
Sbjct: 615 GLIDEMREKGVSPDVCTYNHMLNCLCEGGRINDAPSVLDEMLQKGISPNISSFRILIKAF 674

Query: 232 -----------------------------MFDN----GKFKQAIGFWKDQLRKGCPPYLI 258
                                        MF+     GK  +A   ++  L +       
Sbjct: 675 CKACDFKASHEVFEIALNVCGHKEALYTLMFNELLVGGKVAEAKELFETALDRSFDIGNF 734

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
            Y  LI+++CK   +  A +VL  +  +G   D  ++  +++   K G    A  +   +
Sbjct: 735 LYKDLIDRLCKDEKLEAASDVLHRLIDKGYQFDPASFMPVIDGFGKMGNKHVADELAERM 794

Query: 319 LSRGMEPN 326
           +    E N
Sbjct: 795 MEMASESN 802


>gi|242067038|ref|XP_002454808.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
 gi|241934639|gb|EES07784.1| hypothetical protein SORBIDRAFT_04g037860 [Sorghum bicolor]
          Length = 951

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 132/454 (29%), Positives = 220/454 (48%), Gaps = 2/454 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +    + ++      G +  A  L   M  R  + D      L+ GL +   +  A 
Sbjct: 498 VEANNFVVDSLVNGLRKNGNIEGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAF 557

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KV Q ++     PD + YN+ +  LC  G+   A + L EM  +G EPD  TYNT++   
Sbjct: 558 KVGQELMEKNLSPDAVVYNVFINCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAAR 617

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK  +A+   K+  R    P LITYT L+  + +   + +A  +L++MA  G +P  
Sbjct: 618 CREGKTSKALKLLKEMKRNSIKPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTS 677

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNL-LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +T+  ++  +C   +  D +L I+ L +  G+  +   YNTL+H L   G       +LD
Sbjct: 678 LTHQRVLQ-ACSGSRRPDVILEIHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLD 736

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M     +P   T+N LI G CK   +D A   + QM+ +   P+I T+NT+LG L   G
Sbjct: 737 EMLTRGIAPDTITFNALILGHCKSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAG 796

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            + EA  +L  +      P  +TY+ L+ G AKK    +A+ LY +M+  G  P   T+ 
Sbjct: 797 RIGEADTVLSDMKKVGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYN 856

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +L+  F +A  + +A +L  E+ +RG    +S Y ++++G  K +       +L+ M   
Sbjct: 857 SLMSDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGIEVRILLKDMKEL 916

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +KP     S++ +  +  GMT EA +L + L +
Sbjct: 917 GFKPSKGTISSMSRAFSRPGMTGEARRLLKTLFK 950



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 231/460 (50%), Gaps = 12/460 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  + N  L     +G    A  ++  M +R    D       + GL R   + +A+
Sbjct: 111 VAADTVSYNIFLAALSEQGHGRLAPPVLSEMCKRGVSWDGVTVSTALVGLCRTGLVGEAA 170

Query: 173 KVLQIMVMSGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
            + +++V   G+   D + +N ++ G CK   + +A+A+++ M+  G   DV+ YN+++ 
Sbjct: 171 ALAEMLVRGRGIDGLDVVGWNALIDGYCKVQDMAAALAVVERMTTQGVALDVVGYNSLVA 230

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
             F +G    A+   +     G  P ++TYT LI + CK  G+  A  + + M   G  P
Sbjct: 231 GFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDEAFSLYEGMVRSGVLP 290

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS--RGCWDAVDK 348
           D+VT ++LV+  C+ G++ +A  +   +   G+ PN +TY TL+ SL    RG      +
Sbjct: 291 DVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLIDSLAKARRG-----SE 345

Query: 349 ILDIMNEASHSPTVF---TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
            L ++ E      V     Y  L++ L K G ++ A +      S N  P+ VTY  ++ 
Sbjct: 346 SLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVD 405

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           A C+ G ++ A Q+L  +   S  P ++T++++I+GL K+GC+ KA     +M ++GI+P
Sbjct: 406 AHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAP 465

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           + +T+ TLI GF +    E A+D+ +++   G +  N     +++GL K+  ++ A  + 
Sbjct: 466 NVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALF 525

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + M       D   ++T++  +   G    A+K+ Q+L+E
Sbjct: 526 KDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELME 565



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 120/430 (27%), Positives = 205/430 (47%), Gaps = 6/430 (1%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L+  M  R  + D      L+  L +  +IE+A  VL+        P+ +TY ++V   C
Sbjct: 349 LLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITPNFVTYTVLVDAHC 408

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           + G I  A  +L +M      P+V+T+++I+  +   G   +A  + +     G  P ++
Sbjct: 409 RAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKMKDSGIAPNVV 468

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY  LI+   K  G   A++V  DM  EG   +    +SLVN   K G  + A  +  ++
Sbjct: 469 TYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNIEGAEALFKDM 528

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             RG+  + + Y TL+  L   G   A  K+   + E + SP    YN+ IN LC  G  
Sbjct: 529 DERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVFINCLCTLGKF 588

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A +   +M +   +PD  TYNT++ A C+EG  ++AL+LL  +  +S  P LITY TL
Sbjct: 589 SEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSIKPNLITYTTL 648

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW---GFCRADQVEEAVDLLKEIGK 495
           + GL + G ++KA  L  +M   G +P  +TH+ ++    G  R D + E  +L+   G 
Sbjct: 649 VVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILEIHELMMGAGL 708

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
             +    + Y  ++H LC       A  VL+ M++    PD   F+ ++         + 
Sbjct: 709 HADI---TVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLDN 765

Query: 556 AYKLWQKLIE 565
           A+ ++ +++ 
Sbjct: 766 AFAIYAQMLH 775



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/491 (25%), Positives = 223/491 (45%), Gaps = 35/491 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G +  A +++  M  ++ IP+     ++I GL++   + KA+  ++ M
Sbjct: 399 TYTVLVDAHCRAGNIDGAEQVLLQMEEKSVIPNVVTFSSIINGLVKRGCLGKAADYMRKM 458

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG  P+ +TY  ++ G  K     +A+ +  +M   G E +    ++++  +  NG  
Sbjct: 459 KDSGIAPNVVTYGTLIDGFFKFQGQEAALDVYRDMLHEGVEANNFVVDSLVNGLRKNGNI 518

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A   +KD   +G     + YT L++ + K   +  A +V  ++  +  SPD V YN  
Sbjct: 519 EGAEALFKDMDERGLLLDHVNYTTLMDGLFKTGNMPAAFKVGQELMEKNLSPDAVVYNVF 578

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  C  GK+ +A   +  + + G+EP+  TYNT++ +    G      K+L  M   S 
Sbjct: 579 INCLCTLGKFSEAKSFLKEMRNTGLEPDQATYNTMIAARCREGKTSKALKLLKEMKRNSI 638

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP----------------------- 395
            P + TY  L+ GL + G+V +A    N+M S    P                       
Sbjct: 639 KPNLITYTTLVVGLLEAGVVKKAKFLLNEMASAGFAPTSLTHQRVLQACSGSRRPDVILE 698

Query: 396 ------------DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
                       DI  YNT++  LC  GM   A  +L  +     +P  IT+N LI G  
Sbjct: 699 IHELMMGAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHC 758

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K   ++ A  +Y QM+  G+SP+  T  TL+ G   A ++ EA  +L ++ K G +  N 
Sbjct: 759 KSSHLDNAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNL 818

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y +++ G  K      A+++   M+S  + P  + +++++   A  GM  +A +L+ ++
Sbjct: 819 TYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEM 878

Query: 564 IEWKVFEKGTT 574
               V    +T
Sbjct: 879 KRRGVLHTSST 889



 Score =  110 bits (274), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 94/393 (23%), Positives = 173/393 (44%), Gaps = 44/393 (11%)

Query: 184 VP-DTITYNMMVGGLCKRGQIRSAIALL----DEMSVSGCEPDVITYNTILRTMFDNGKF 238
           VP DT+T N ++   C    +R A++LL       S S    D ++YN  L  + + G  
Sbjct: 72  VPGDTLTLNSIILSYCSLRSLRPALSLLRSSSGPQSQSQVAADTVSYNIFLAALSEQGHG 131

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD---IVTY 295
           + A     +  ++G     +T +  +  +C+  G+      L +M + G   D   +V +
Sbjct: 132 RLAPPVLSEMCKRGVSWDGVTVSTALVGLCR-TGLVGEAAALAEMLVRGRGIDGLDVVGW 190

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK      A+ V+  + ++G+                          LD++  
Sbjct: 191 NALIDGYCKVQDMAAALAVVERMTTQGVA-------------------------LDVVG- 224

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                    YN L+ G    G  D A+    +M +   +P++VTY  ++G  CK   ++E
Sbjct: 225 ---------YNSLVAGFFHSGDADAALEVVERMKADGVEPNVVTYTALIGEYCKGKGMDE 275

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   +  S   P ++T + L+DGL + G   +A  L+ +M + G++P+ +T+ TLI 
Sbjct: 276 AFSLYEGMVRSGVLPDVVTLSALVDGLCRDGQFSEAYALFREMDKIGVAPNHVTYCTLID 335

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
              +A +  E++ LL E+  RG  M    Y  ++  L K  K++ A  VL    S    P
Sbjct: 336 SLAKARRGSESLGLLGEMVSRGVVMDLVMYTALMDRLGKEGKIEEAKDVLRHAQSDNITP 395

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +   ++ +V      G  + A ++  ++ E  V
Sbjct: 396 NFVTYTVLVDAHCRAGNIDGAEQVLLQMEEKSV 428



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 106/244 (43%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D    N ++   C  G   +A+ ++D M  R   PD      LI G  +   ++
Sbjct: 705 GAGLHADITVYNTLVHVLCCHGMARNATVVLDEMLTRGIAPDTITFNALILGHCKSSHLD 764

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A  +   M+  G  P+  T+N ++GGL   G+I  A  +L +M   G EP+ +TY+ ++
Sbjct: 765 NAFAIYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVLSDMKKVGLEPNNLTYDILV 824

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                     +A+  + + + KG  P   TY  L+    K   + +A E+  +M   G  
Sbjct: 825 TGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLMSDFAKAGMMNQAKELFSEMKRRGVL 884

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
               TY+ L+N   K     +  +++ ++   G +P+  T +++  +    G      ++
Sbjct: 885 HTSSTYDILLNGWSKLRNGIEVRILLKDMKELGFKPSKGTISSMSRAFSRPGMTGEARRL 944

Query: 350 LDIM 353
           L  +
Sbjct: 945 LKTL 948


>gi|302785283|ref|XP_002974413.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
 gi|300158011|gb|EFJ24635.1| hypothetical protein SELMODRAFT_174049 [Selaginella moellendorffii]
          Length = 447

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 112/386 (29%), Positives = 207/386 (53%), Gaps = 7/386 (1%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + ++Y +++ G CK G+ + A+ LLDEM  +G  P+V+ + TI+R +   GK  QA+  +
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF 88

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           + ++ + C P + TY+IL++ +CK      A  ++ +M  +GCSP++VTYN+L++   K 
Sbjct: 89  R-RIGEDCAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
            + D+ ++++  +  RG   + ITY  +L         D   ++L+ + + +    V TY
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRN----VVTY 203

Query: 366 NILINGL--CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           N L   L   +      A++   +M+ +  +P+ V Y TVL  LCK   L+EA Q+L  +
Sbjct: 204 NSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM 263

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
               C    ++Y  L+   A  G    ++ L G+M+ +G   D  T   +I  FC+A  +
Sbjct: 264 YSQGCKTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDL 323

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            EA  L K + +RG+   N  Y  +I   CK+++ D A+++L  MI + +KP+   +++I
Sbjct: 324 HEAHQLFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSI 383

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKVF 569
           +K    +   EEA  ++Q +++   F
Sbjct: 384 IKSFCREQREEEARGIFQMMVDSGCF 409



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 187/385 (48%), Gaps = 36/385 (9%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++Q FC  G+   A +L+D M      P+      +IRGL    ++ +A    +  +   
Sbjct: 36  LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFR-RIGED 94

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  TY+++V  LCK GQ   A  L+ EM   GC P+V+TYN ++       +  + +
Sbjct: 95  CAPNVYTYSILVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVL 154

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGI----------------------------- 273
              K+  ++GC   +ITYT++++  CK   I                             
Sbjct: 155 MLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAE 214

Query: 274 ----ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
                 A+ +L+ M  EG  P+ V Y +++   CK  + D+A  V+ ++ S+G + + ++
Sbjct: 215 GDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVS 274

Query: 330 YNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           Y  L+ +  S G  +D+++ +L  M  + +     T N++I+  CK G +  A   F  M
Sbjct: 275 YKILVVAFASAGRTYDSLE-LLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSM 333

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             +   P  VTYNT++GA CK    + A++LLH +  +   P +ITYN++I    ++   
Sbjct: 334 CQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQRE 393

Query: 449 EKAMVLYGQMMENGISPDDITHRTL 473
           E+A  ++  M+++G  PD +++ TL
Sbjct: 394 EEARGIFQMMVDSGCFPDRVSYTTL 418



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 69/280 (24%), Positives = 123/280 (43%), Gaps = 13/280 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP--DFHFCINLIRGLIRIDRIEKASK 173
           D  T   IL  FC    + +A +L++ + +RN +        ++   G    DR  +A  
Sbjct: 168 DVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEG----DRTTEALS 223

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ M+  G  P+ + Y  ++  LCK  ++  A  +L  M   GC+ D ++Y  ++    
Sbjct: 224 LLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFA 283

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+   ++      L  G      T  ++I + CK   +  A ++   M   G  P  V
Sbjct: 284 SAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMCQRGSIPSNV 343

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L+   CK  + D AV +++ ++    +PN ITYN+++ S       +    I  +M
Sbjct: 344 TYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMM 403

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
            ++   P   +Y  L     K    D AI  ++Q V   C
Sbjct: 404 VDSGCFPDRVSYTTL-----KISKNDAAI--YDQKVHDTC 436



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 40/150 (26%), Positives = 78/150 (52%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + D+ +   ++  F S G+  D+ +L+  M     I D      +I    +   + +A +
Sbjct: 269 KTDDVSYKILVVAFASAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQ 328

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + M   G +P  +TYN ++G  CK  Q  +A+ LL +M  +  +P+VITYN+I+++  
Sbjct: 329 LFKSMCQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFC 388

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
              + ++A G ++  +  GC P  ++YT L
Sbjct: 389 REQREEEARGIFQMMVDSGCFPDRVSYTTL 418


>gi|255541126|ref|XP_002511627.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223548807|gb|EEF50296.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1163

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 124/427 (29%), Positives = 215/427 (50%), Gaps = 12/427 (2%)

Query: 153 HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
            F  +LIR   +    +++ +V   M   G  P  +T+N ++  L KRG+   A ++ DE
Sbjct: 157 RFFNSLIRSYGKAGLFQESVQVFNSMKSVGVSPSVVTFNSLLLILLKRGRTNMAQSVFDE 216

Query: 213 M-SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           M S  G  PD  T+N ++R    N    +   F+K+  R  C P L+TY  L++ +C+  
Sbjct: 217 MLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKEMSRFKCDPDLVTYNTLVDGLCRAG 276

Query: 272 GIARAIEVLDDMAIEGCS--PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
            +  A  V++ M  +  +  PD+VTY +LV   C + + D+A++V   ++S+G++PN IT
Sbjct: 277 KVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEIT 336

Query: 330 YNTLLHSLGSRGCWDAVDKILD-IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           YNTL+  L      D + +I +  +      P   T N L+N  C  G ++ A+  F +M
Sbjct: 337 YNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKM 396

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-------LLNGSSCSPCLITYNTLIDG 441
           +  N +PD  TY+ ++  LC+ G    A QL         LL    C+P +  Y ++ + 
Sbjct: 397 MVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEF 456

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L + G   KA  ++ Q+M+ G + D ++ + LI G CR    E   +LL  + +R     
Sbjct: 457 LCRNGKTAKAERVFRQLMKRG-TQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPD 515

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y+ +I GL +  +  +A Q LE MI S + P+ + F +I+ ++   G   E+ +   
Sbjct: 516 LETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIM 575

Query: 562 KLIEWKV 568
            ++E K+
Sbjct: 576 LMLEGKI 582



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/367 (26%), Positives = 181/367 (49%), Gaps = 12/367 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N +L     RG+   A  + D +++     PD +    LIRG  +   +++  +  + 
Sbjct: 193 TFNSLLLILLKRGRTNMAQSVFDEMLSTYGVTPDTYTFNILIRGFCKNSMVDEGFRFFKE 252

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM--SVSGCEPDVITYNTILRTMFDN 235
           M      PD +TYN +V GLC+ G++  A  +++ M    +   PDV+TY T++R     
Sbjct: 253 MSRFKCDPDLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMK 312

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD-MAIEGCSPDIVT 294
            +  +A+  +++ + KG  P  ITY  LI+ +C+   I +  ++ +  +   G  PD  T
Sbjct: 313 HEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCT 372

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
            N+L+N  C  G  +DA+ V   ++   + P+S TY+ L+ +L  RG ++  +++ D ++
Sbjct: 373 LNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELS 432

Query: 355 EASH-------SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           E          +P V  Y  +   LC+ G   +A   F Q++ +  Q D +++  ++   
Sbjct: 433 EKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGH 491

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C+EG      +LL L+      P L TY +LIDGL +KG    A     +M+++   P+ 
Sbjct: 492 CREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPET 551

Query: 468 ITHRTLI 474
            T  +++
Sbjct: 552 STFHSIL 558



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 186/425 (43%), Gaps = 43/425 (10%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARR--NQIPDFHFCINLIRGLIRIDRIEKASK 173
           D  T N ++   C  GK+  A  +++ M ++  N  PD      L+RG      I++A  
Sbjct: 261 DLVTYNTLVDGLCRAGKVNIAHNVVNGMVKKSTNLNPDVVTYTTLVRGYCMKHEIDEALV 320

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD-EMSVSGCEPDVITYNTILRTM 232
           V + MV  G  P+ ITYN ++ GLC+  +I     + +  +   G  PD  T NT++   
Sbjct: 321 VFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIFEGALGGGGFIPDTCTLNTLMNAH 380

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI------- 285
            + G    A+  ++  +     P   TY++LI  +C++    RA ++ D+++        
Sbjct: 381 CNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQRGNFERAEQLFDELSEKEILLRD 440

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +GC+P +  Y S+  F C+ GK   A  V   L+ RG + + +++  L+      G ++A
Sbjct: 441 DGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRGTQ-DPLSFKILIKGHCREGTFEA 499

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             ++L +M      P + TY  LI+GL + G    A  +  +M+  +  P+  T++++L 
Sbjct: 500 GYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQTLEKMIKSSHVPETSTFHSILA 559

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            L  +G  +E+ + + L+        +      +  L   G  +KA  + G +  NG   
Sbjct: 560 RLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLFGSGLRDKAFKIVGLLYANGYVV 619

Query: 466 DD--------------ITHR------------------TLIWGFCRADQVEEAVDLLKEI 493
           D               + H+                  T+I G C+  +  EA  L  E+
Sbjct: 620 DMEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCDTVIEGLCKMKRHSEAFGLYYEL 679

Query: 494 GKRGN 498
            ++GN
Sbjct: 680 VEKGN 684



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 90/438 (20%), Positives = 168/438 (38%), Gaps = 78/438 (17%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +++ +C + ++ +A  + + M  +   P+      LI+GL  + +I+K  ++ 
Sbjct: 298 DVVTYTTLVRGYCMKHEIDEALVVFEEMVSKGLKPNEITYNTLIKGLCEVQKIDKIKQIF 357

Query: 176 QIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           +  +  GG +PDT T N ++   C  G +  A+ + ++M V    PD  TY+ ++R +  
Sbjct: 358 EGALGGGGFIPDTCTLNTLMNAHCNAGNLNDALEVFEKMMVLNVRPDSATYSVLIRNLCQ 417

Query: 235 NGKFKQAIGFWKDQLRK-------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
            G F++A   + +   K       GC P +  Y  + E +C+    A+A  V   +   G
Sbjct: 418 RGNFERAEQLFDELSEKEILLRDDGCTPLVAAYKSMFEFLCRNGKTAKAERVFRQLMKRG 477

Query: 288 CS----------------------------------PDIVTYNSLVNFSCKQGKYDDAVL 313
                                               PD+ TY SL++   ++G+   A  
Sbjct: 478 TQDPLSFKILIKGHCREGTFEAGYELLVLMLRRDFVPDLETYQSLIDGLLQKGEPLVAYQ 537

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
            +  ++     P + T++++L  L ++GC     + + +M E      +      +  L 
Sbjct: 538 TLEKMIKSSHVPETSTFHSILARLLAKGCAHESARFIMLMLEGKIRQNINLSTHTVRLLF 597

Query: 374 KYGLVDRAIN---------------------SFNQM-----------VSKNCQPDIVTYN 401
             GL D+A                       S N+            + K+   DI   +
Sbjct: 598 GSGLRDKAFKIVGLLYANGYVVDMEELIGFLSHNRKFLLAHKLLLFCLEKHQNVDIDMCD 657

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           TV+  LCK    +EA  L + L     +  L     L   L  +G +E+   L  + M N
Sbjct: 658 TVIEGLCKMKRHSEAFGLYYELVEKGNNQPLRCLENLRVALEARGRLEEVKFL-SKRMPN 716

Query: 462 GISPD---DITHRTLIWG 476
              PD   ++ H    W 
Sbjct: 717 KRQPDKYLELPHWNWKWA 734


>gi|356546522|ref|XP_003541675.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g09900-like [Glycine max]
          Length = 789

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 118/432 (27%), Positives = 215/432 (49%), Gaps = 5/432 (1%)

Query: 136 ASKLIDIMARR--NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMM 193
           A +++ +M RR     P+   C+  +    R  ++  A +VL +M  +G  P+    N  
Sbjct: 215 ARRVLRLMTRRGIELSPEAFGCV--MVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTT 272

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
           +  L K  ++  A+  L+ M V+G +PD++TYN++++   D  + + A+        KGC
Sbjct: 273 IYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGC 332

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDAV 312
           PP  ++Y  ++  +CK+  I +   +++ M  +    PD VTYN+L++   K G  DDA+
Sbjct: 333 PPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDAL 392

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
             +     +G   + + Y+ ++HS   +G  D    ++  M   S +P V TY  +++G 
Sbjct: 393 AFLKEAEDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGF 452

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           C+ G +D A     QM    C+P+ V+Y  +L  LC  G   EA +++++      +P  
Sbjct: 453 CRLGRIDEAKKMLQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNA 512

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           ITY  ++ G  ++G + +A  L  +M+E G  P  +    LI   C+  +V EA   L+E
Sbjct: 513 ITYGVVMHGFRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEE 572

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
              +G  +    +  VIHG C+   ++ A+ VLE M  S   PD   ++ +   +   G 
Sbjct: 573 CLNKGCAINVVNFTTVIHGFCQIGDMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGR 632

Query: 553 TEEAYKLWQKLI 564
            +EA +L  K++
Sbjct: 633 LDEAAELIVKML 644



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 218/448 (48%), Gaps = 3/448 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N +++ +C   ++ DA +LI  +  +   PD      ++  L +  +IE+  
Sbjct: 297 IKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVK 356

Query: 173 KVLQIMVM-SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +++ MV  S  +PD +TYN ++  L K G    A+A L E    G   D + Y+ I+ +
Sbjct: 357 CLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHS 416

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G+  +A     D   + C P ++TYT +++  C+   I  A ++L  M   GC P+
Sbjct: 417 FCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPN 476

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            V+Y +L+N  C  GK  +A  +IN        PN+ITY  ++H     G       +  
Sbjct: 477 TVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTR 536

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M E    PT    N+LI  LC+   V  A     + ++K C  ++V + TV+   C+ G
Sbjct: 537 EMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIG 596

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +  AL +L  +  S+  P  +TY  L D L KKG +++A  L  +M+  G+ P  +T R
Sbjct: 597 DMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFR 656

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           ++I  +C+  +V++ ++LL  + KR  K   + Y  VI  LC    ++ A ++L  ++ +
Sbjct: 657 SVIHRYCQWGRVDDMLNLLDRMVKR--KPFRTIYNHVIEKLCDFGNLEEAEKLLGKVLRT 714

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             K D      +++     G+   AYK+
Sbjct: 715 ASKLDANTCHVLMESCLKKGVALSAYKV 742



 Score =  177 bits (450), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 123/478 (25%), Positives = 225/478 (47%), Gaps = 38/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ ++   GKL +A +++ +M +    P+   C   I  L++  ++EKA + L+ M ++G
Sbjct: 237 VMVSYSRAGKLRNALRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTG 296

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TYN ++ G C   +I  A+ L+  +   GC PD ++Y T++  +    K +Q  
Sbjct: 297 IKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVK 356

Query: 243 GFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +  ++     P  +TY  LI  + K      A+  L +   +G   D V Y+++V+ 
Sbjct: 357 CLMEKMVQDSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAEDKGFHIDKVGYSAIVHS 416

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C++G+ D+A  ++ ++ SR   P+ +TY  ++      G  D   K+L  M +    P 
Sbjct: 417 FCQKGRMDEAKSLVIDMYSRSCNPDVVTYTAIVDGFCRLGRIDEAKKMLQQMYKHGCKPN 476

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL-- 419
             +Y  L+NGLC  G    A    N        P+ +TY  V+    +EG L+EA  L  
Sbjct: 477 TVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGVVMHGFRREGKLSEACDLTR 536

Query: 420 -------------LHLLNGSSC------------SPCL--------ITYNTLIDGLAKKG 446
                        ++LL  S C              CL        + + T+I G  + G
Sbjct: 537 EMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIG 596

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            ME A+ +   M  +   PD +T+  L     +  +++EA +L+ ++  +G       +R
Sbjct: 597 DMEAALSVLEDMYLSNKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTFR 656

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            VIH  C+  +VD  + +L+ M+  + KP  T+++ +++K+ D G  EEA KL  K++
Sbjct: 657 SVIHRYCQWGRVDDMLNLLDRMV--KRKPFRTIYNHVIEKLCDFGNLEEAEKLLGKVL 712



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 57/201 (28%), Positives = 100/201 (49%), Gaps = 3/201 (1%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           SH P V  Y  L++ L K  L   A      M  +  +     +  V+ +  + G L  A
Sbjct: 193 SHHPLV--YYTLLDVLSKTKLCQGARRVLRLMTRRGIELSPEAFGCVMVSYSRAGKLRNA 250

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           L++L L+  +   P L   NT I  L K   +EKA+    +M   GI PD +T+ +LI G
Sbjct: 251 LRVLTLMQKAGVEPNLSICNTTIYVLVKGCKLEKALRFLERMQVTGIKPDIVTYNSLIKG 310

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS-SRYKP 535
           +C  +++E+A++L+  +  +G      +Y  V+  LCK KK++    ++E M+  S   P
Sbjct: 311 YCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEQVKCLMEKMVQDSNLIP 370

Query: 536 DDTVFSTIVKKVADDGMTEEA 556
           D   ++T++  ++  G  ++A
Sbjct: 371 DQVTYNTLIHMLSKHGHADDA 391


>gi|356528166|ref|XP_003532676.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Glycine max]
          Length = 852

 Score =  201 bits (512), Expect = 7e-49,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 221/435 (50%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G L +A +    M +   +P    C  L+  L +  +   A    + MV++G  P   TY
Sbjct: 195 GMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSFFKDMVVAGLSPSVFTY 254

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           NM++G L + G + +A +L +EM   G  PD++TYN+++      G    A+  +++   
Sbjct: 255 NMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEMKD 314

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            GC P +ITY  LI   CK   I +A E L  M   G  P++VTY++L++  CK G   +
Sbjct: 315 AGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLE 374

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A     +++  G++PN  TY +L+ +    G  +   K+   M +A  +  + TY  L++
Sbjct: 375 ANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLD 434

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GLC+ G +  A   F  ++      +   Y ++     K  M+ +A+ +L  +N  +  P
Sbjct: 435 GLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKP 494

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            L+ Y T I GL ++  +E +M +  +MM+ G++ +   + TLI  + +  +  EAV+LL
Sbjct: 495 DLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLL 554

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +E+   G K+    Y ++I GLCK   V  A++  + M  +  +P+  +++ ++  +  +
Sbjct: 555 QEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKN 614

Query: 551 GMTEEAYKLWQKLIE 565
              EEA  L+ ++++
Sbjct: 615 DCLEEAKNLFNEMLD 629



 Score =  186 bits (473), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 205/413 (49%), Gaps = 1/413 (0%)

Query: 154 FCINLIRG-LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
           F  N++ G L R   +E A  + + M   G  PD +TYN ++ G  K G +  A+++ +E
Sbjct: 252 FTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEE 311

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           M  +GCEPDVITYN+++       +  QA  +     ++G  P ++TY+ LI+  CK   
Sbjct: 312 MKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGM 371

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           +  A +   DM   G  P+  TY SL++ +CK G  ++A  + + +   G+  N +TY  
Sbjct: 372 LLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTA 431

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           LL  L   G     +++   + +A  +     Y  L +G  K  ++++A++   +M  KN
Sbjct: 432 LLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKN 491

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
            +PD++ Y T +  LC++  + +++ ++  +     +     Y TLID   K G   +A+
Sbjct: 492 LKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAV 551

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  +M + GI    +T+  LI G C+   V++AV     + + G +     Y  +I GL
Sbjct: 552 NLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGL 611

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           CK+  ++ A  +   M+     PD  V+++++      G   EA  L  +++E
Sbjct: 612 CKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVE 664



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/384 (29%), Positives = 191/384 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++  FC   ++  A + +  M +R   P+      LI    +   + +A+K
Sbjct: 318 EPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGMLLEANK 377

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
               M+  G  P+  TY  ++   CK G +  A  L  EM  +G   +++TY  +L  + 
Sbjct: 378 FFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTALLDGLC 437

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           ++G+ ++A   +   L+ G       YT L     K   + +A+++L++M  +   PD++
Sbjct: 438 EDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNLKPDLL 497

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y + +   C+Q + +D++ VI  ++  G+  NS  Y TL+ +    G       +L  M
Sbjct: 498 LYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVNLLQEM 557

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +     TV TY +LI+GLCK GLV +A+  F+ M     QP+I+ Y  ++  LCK   L
Sbjct: 558 QDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCL 617

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA  L + +     SP  + Y +LIDG  K G   +A+ L  +M+E G+  D   + +L
Sbjct: 618 EEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSL 677

Query: 474 IWGFCRADQVEEAVDLLKEIGKRG 497
           IWGF R  QV+ A  LL E+ ++G
Sbjct: 678 IWGFSRYGQVQLAKSLLDEMLRKG 701



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 129/476 (27%), Positives = 213/476 (44%), Gaps = 35/476 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++      G L  A  L + M  +   PD     +LI G  ++  +  A  V + M
Sbjct: 253 TYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGKVGMLTGAVSVFEEM 312

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  PD ITYN ++   CK  +I  A   L  M   G +P+V+TY+T++      G  
Sbjct: 313 KDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVTYSTLIDAFCKAGML 372

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A  F+ D +R G  P   TYT LI+  CK   +  A ++  +M   G + +IVTY +L
Sbjct: 373 LEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEMQQAGVNLNIVTYTAL 432

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C+ G+  +A  +   LL  G   N   Y +L H        +    IL+ MN+ + 
Sbjct: 433 LDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMMEKAMDILEEMNKKNL 492

Query: 359 SPTVFTYNILINGLC-----------------------------------KYGLVDRAIN 383
            P +  Y   I GLC                                   K G    A+N
Sbjct: 493 KPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTLIDAYFKVGKTTEAVN 552

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              +M     +  +VTY  ++  LCK G++ +A++    +  +   P ++ Y  LIDGL 
Sbjct: 553 LLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLC 612

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K  C+E+A  L+ +M++ GISPD + + +LI G  +     EA+ L   + + G ++   
Sbjct: 613 KNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLC 672

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           AY  +I G  +  +V +A  +L+ M+     PD  +   +++K  + G   EA  L
Sbjct: 673 AYTSLIWGFSRYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALAL 728



 Score =  102 bits (255), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 90/414 (21%), Positives = 165/414 (39%), Gaps = 70/414 (16%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC  G L +A+K    M R    P+     +LI    +I  + +A K+   M
Sbjct: 358 TYSTLIDAFCKAGMLLEANKFFVDMIRVGLQPNEFTYTSLIDANCKIGDLNEAFKLESEM 417

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSA-------------------------------- 206
             +G   + +TY  ++ GLC+ G++R A                                
Sbjct: 418 QQAGVNLNIVTYTALLDGLCEDGRMREAEELFGALLKAGWTLNQQIYTSLFHGYIKAKMM 477

Query: 207 ---IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
              + +L+EM+    +PD++ Y T +  +    + + ++   ++ +  G       YT L
Sbjct: 478 EKAMDILEEMNKKNLKPDLLLYGTKIWGLCRQNEIEDSMAVIREMMDCGLTANSYIYTTL 537

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+   K      A+ +L +M   G    +VTY  L++  CK G    AV   +++   G+
Sbjct: 538 IDAYFKVGKTTEAVNLLQEMQDLGIKITVVTYGVLIDGLCKIGLVQQAVRYFDHMTRNGL 597

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           +PN + Y  L+  L    C +    + + M +   SP    Y  LI+G  K+G    A++
Sbjct: 598 QPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKGISPDKLVYTSLIDGNMKHGNPGEALS 657

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
             N+MV    + D+  Y                                    +LI G +
Sbjct: 658 LRNRMVEIGMELDLCAY-----------------------------------TSLIWGFS 682

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           + G ++ A  L  +M+  GI PD +    L+  +     + EA+ L  ++ +RG
Sbjct: 683 RYGQVQLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRG 736



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 55/205 (26%), Positives = 97/205 (47%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P    ++ L N L   G+++ A   F +M      P + + N +L  L K      AL  
Sbjct: 179 PGFGVFDTLFNVLVDLGMLEEARQCFWKMNKFRVLPKVRSCNELLHRLSKSSKGGLALSF 238

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +  +  SP + TYN +I  LA++G +E A  L+ +M   G+ PD +T+ +LI G+ +
Sbjct: 239 FKDMVVAGLSPSVFTYNMVIGCLAREGDLEAARSLFEEMKAKGLRPDIVTYNSLIDGYGK 298

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              +  AV + +E+   G +     Y  +I+  CK +++  A + L  M     +P+   
Sbjct: 299 VGMLTGAVSVFEEMKDAGCEPDVITYNSLINCFCKFERIPQAFEYLHGMKQRGLQPNVVT 358

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLI 564
           +ST++      GM  EA K +  +I
Sbjct: 359 YSTLIDAFCKAGMLLEANKFFVDMI 383



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 98/219 (44%), Gaps = 12/219 (5%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL +I  +++A +    M  +G  P+ + Y  ++ GLCK   +  A  L +EM   G
Sbjct: 572 LIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEMLDKG 631

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PD + Y +++     +G   +A+      +  G    L  YT LI    +   +  A 
Sbjct: 632 ISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQVQLAK 691

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM--------EPNSIT 329
            +LD+M  +G  PD V    L+    + G  ++A+ + +++  RG+         P+ +T
Sbjct: 692 SLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRGLISGTIDITVPSCLT 751

Query: 330 YNTLLHSL-GSRGCWD---AVDKILDIMNEASHSPTVFT 364
             T LH L  S+   D     +  L  + E SHS   F+
Sbjct: 752 AVTKLHKLCASQSGTDFHRTANLYLADVEEFSHSGMPFS 790



 Score = 51.2 bits (121), Expect = 0.001,   Method: Compositional matrix adjust.
 Identities = 45/179 (25%), Positives = 70/179 (39%), Gaps = 39/179 (21%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G +  A +  D M R    P+      LI GL + D +E+A  +   M
Sbjct: 568 TYGVLIDGLCKIGLVQQAVRYFDHMTRNGLQPNIMIYTALIDGLCKNDCLEEAKNLFNEM 627

Query: 179 VMSGGVPDTITYNMMVGG-------------------------LC----------KRGQI 203
           +  G  PD + Y  ++ G                         LC          + GQ+
Sbjct: 628 LDKGISPDKLVYTSLIDGNMKHGNPGEALSLRNRMVEIGMELDLCAYTSLIWGFSRYGQV 687

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           + A +LLDEM   G  PD +    +LR  ++ G   +A+    D  R+G    LI+ TI
Sbjct: 688 QLAKSLLDEMLRKGIIPDQVLCICLLRKYYELGDINEALALHDDMARRG----LISGTI 742


>gi|218196467|gb|EEC78894.1| hypothetical protein OsI_19266 [Oryza sativa Indica Group]
 gi|222630938|gb|EEE63070.1| hypothetical protein OsJ_17878 [Oryza sativa Japonica Group]
          Length = 939

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/474 (27%), Positives = 231/474 (48%), Gaps = 32/474 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+ FCS   + DA +L  +M +R   P+   C  L+ GL +  + E+A  + +  
Sbjct: 431 TYNTLLKGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKET 490

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   + IT+N ++ GLCK G++  A  LLD M    C PD +TY T+       G+ 
Sbjct: 491 LARGLAKNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQL 550

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILI--EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
             A          G  P +  +   I    + KQ    +  ++  +M+  G SP++VTY 
Sbjct: 551 GTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQW--HKVNDIHSEMSARGLSPNLVTYG 608

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA----------- 345
           +L+   CK+G   +A  +   +++ GM PN    + L+      G  D            
Sbjct: 609 ALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKEGKVDEANLVLQKLVNI 668

Query: 346 ------------VDKILDIMNEAS----HSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
                       +DKI  +++  +    HS  V  +N++I GLCK G +  A + F  + 
Sbjct: 669 DMIPGCSISTIEIDKISHVVDTIADGNPHSANVM-WNVIIFGLCKSGRIADAKSLFESLR 727

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           +K   PD  TY++++      G ++EA  L  ++  +  +P +ITYN+LI GL K G + 
Sbjct: 728 NKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLS 787

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A+ L+ ++   GISP+ IT+ TLI  +C+  +  EA  L +++ + G +     Y ++I
Sbjct: 788 RAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILI 847

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +GLC    ++ AI++L+ MI +   P+   + T++      G  EE  KL+ ++
Sbjct: 848 YGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEM 901



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/423 (27%), Positives = 209/423 (49%), Gaps = 1/423 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L+     G+L+ A  + D M +    P    C  L+  L++      A+ V   M ++G
Sbjct: 154 LLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYGQMRIAG 213

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD  T  +M    C+ G++  A+  ++EM   G E +++ Y+ ++      G  + A 
Sbjct: 214 VLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMGWTEDAR 273

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNF 301
              +   RKG  P ++TYT+L++  CK   +  A  V+ +M   G    D V Y  ++N 
Sbjct: 274 RILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAYGMMING 333

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C++G+ DDA  V N +   G+  N   YNT+++ L   G  + V K+L  M +    P 
Sbjct: 334 YCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMEDVGMRPD 393

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++YN LI+G C+ G + +A      MV        +TYNT+L   C    +++AL+L  
Sbjct: 394 KYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWF 453

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           L+     +P  I+ +TL+DGL K G  E+A+ L+ + +  G++ + IT  T+I G C+  
Sbjct: 454 LMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIG 513

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ EA +LL  + +      +  YR +  G CK  ++  A  ++  M    + P   +F+
Sbjct: 514 RMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFN 573

Query: 542 TIV 544
           + +
Sbjct: 574 SFI 576



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 140/553 (25%), Positives = 237/553 (42%), Gaps = 110/553 (19%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINL------IRGLIRIDRIE 169
           DE     ++  +C RG++ DA+++      RN++ D    +NL      I GL ++ R+E
Sbjct: 323 DEVAYGMMINGYCQRGRMDDATRV------RNEMRDAGIHVNLFVYNTMINGLCKLGRME 376

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +  KVLQ M   G  PD  +YN ++ G C+ G +R A  +   M  +G     +TYNT+L
Sbjct: 377 EVQKVLQEMEDVGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLL 436

Query: 230 RT-----------------------------------MFDNGKFKQAIGFWKDQLRKGCP 254
           +                                    +F  GK +QA+  WK+ L +G  
Sbjct: 437 KGFCSLHAIDDALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLA 496

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
             +IT+  +I  +CK   +A A E+LD M    C PD +TY +L +  CK G+   A  +
Sbjct: 497 KNVITFNTVINGLCKIGRMAEAEELLDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHL 556

Query: 315 IN-----------------------------------NLLSRGMEPNSITYNTLLHSLGS 339
           +N                                    + +RG+ PN +TY  L+     
Sbjct: 557 MNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCK 616

Query: 340 RG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI- 397
            G   +A +   +++N    +P VF  + L++   K G VD A     ++V+ +  P   
Sbjct: 617 EGNLHEACNLYFEMVNNGM-NPNVFICSALMSCFYKEGKVDEANLVLQKLVNIDMIPGCS 675

Query: 398 -------------------------VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
                                    V +N ++  LCK G + +A  L   L      P  
Sbjct: 676 ISTIEIDKISHVVDTIADGNPHSANVMWNVIIFGLCKSGRIADAKSLFESLRNKRFLPDN 735

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
            TY++LI G A  G +++A  L   M+  G++P+ IT+ +LI+G C++ ++  AV+L  +
Sbjct: 736 FTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLFNK 795

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +  +G       Y  +I   CK  K   A ++ + M+    +P    +S ++  +   G 
Sbjct: 796 LQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQGY 855

Query: 553 TEEAYKLWQKLIE 565
            EEA KL  ++IE
Sbjct: 856 MEEAIKLLDQMIE 868



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 116/382 (30%), Positives = 187/382 (48%), Gaps = 9/382 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +   +C  G+L  A+ L++ M      P      + I G     +  K + + 
Sbjct: 533 DSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFIAKQWHKVNDIH 592

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ +TY  ++ G CK G +  A  L  EM  +G  P+V   + ++   +  
Sbjct: 593 SEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFICSALMSCFYKE 652

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A    +  +     P     TI I+++           V+D +A        V +
Sbjct: 653 GKVDEANLVLQKLVNIDMIPGCSISTIEIDKIS---------HVVDTIADGNPHSANVMW 703

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N ++   CK G+  DA  +  +L ++   P++ TY++L+H   + G  D    + D+M  
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A  +P + TYN LI GLCK G + RA+N FN++ SK   P+ +TYNT++   CKEG   E
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +      P +ITY+ LI GL  +G ME+A+ L  QM+EN + P+ IT+ TLI 
Sbjct: 824 AFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIH 883

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G+ ++  +EE   L  E+  RG
Sbjct: 884 GYIKSGNMEEISKLYDEMHIRG 905



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 113/445 (25%), Positives = 207/445 (46%), Gaps = 36/445 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++  +C  G   DA ++++ + R+   P+      L++G  +  R+E+A +V++ M  
Sbjct: 257 HAVMDCYCGMGWTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKE 316

Query: 181 SGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           +G  V D + Y MM+ G C+RG++  A  + +EM  +G   ++  YNT            
Sbjct: 317 TGDIVVDEVAYGMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNT------------ 364

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
                                  +I  +CK   +    +VL +M   G  PD  +YN+L+
Sbjct: 365 -----------------------MINGLCKLGRMEEVQKVLQEMEDVGMRPDKYSYNTLI 401

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  C++G    A  +   ++  G+   ++TYNTLL    S    D   ++  +M +   +
Sbjct: 402 DGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDDALRLWFLMLKRGVA 461

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   + + L++GL K G  ++A+N + + +++    +++T+NTV+  LCK G + EA +L
Sbjct: 462 PNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVINGLCKIGRMAEAEEL 521

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +    C P  +TY TL DG  K G +  A  L  +M   G +P      + I G   
Sbjct: 522 LDRMKELRCPPDSLTYRTLFDGYCKLGQLGTATHLMNKMEHLGFAPSVEMFNSFITGHFI 581

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A Q  +  D+  E+  RG       Y  +I G CK   +  A  +   M+++   P+  +
Sbjct: 582 AKQWHKVNDIHSEMSARGLSPNLVTYGALIAGWCKEGNLHEACNLYFEMVNNGMNPNVFI 641

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLI 564
            S ++     +G  +EA  + QKL+
Sbjct: 642 CSALMSCFYKEGKVDEANLVLQKLV 666



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 109/442 (24%), Positives = 210/442 (47%), Gaps = 11/442 (2%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR--IEKASKVLQIMVMSGGVPD 186
           SR  L   ++L+ I+AR  +   FH    L+  L           ++V +    S     
Sbjct: 96  SRPSLVSHAQLLHILARARR---FHDARALLSSLPPHAEPLFPHLAEVYRDFTFSA---- 148

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            +++++++      GQ+ SA+ + D M   GC P + + N +L  +  +G    A   + 
Sbjct: 149 -VSFDLLLRAHADAGQLSSALNVFDGMGKVGCRPSLRSCNRLLNKLVQSGDPGMAAMVYG 207

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
                G  P   T  I+ +  C+   +A+A+E +++M   G   ++V Y+++++  C  G
Sbjct: 208 QMRIAGVLPDEFTVAIMAKAYCRDGRVAQAVEFVEEMEGMGLEVNLVAYHAVMDCYCGMG 267

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT-VFTY 365
             +DA  ++ +L  +G+ PN +TY  L+      G  +  ++++  M E          Y
Sbjct: 268 WTEDARRILESLQRKGLSPNVVTYTLLVKGYCKDGRMEEAERVVKEMKETGDIVVDEVAY 327

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
            ++ING C+ G +D A    N+M       ++  YNT++  LCK G + E  ++L  +  
Sbjct: 328 GMMINGYCQRGRMDDATRVRNEMRDAGIHVNLFVYNTMINGLCKLGRMEEVQKVLQEMED 387

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P   +YNTLIDG  ++G M KA  +   M+ NG++   +T+ TL+ GFC    +++
Sbjct: 388 VGMRPDKYSYNTLIDGYCREGSMRKAFEMCRMMVRNGLAATTLTYNTLLKGFCSLHAIDD 447

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+ L   + KRG      +   ++ GL K+ K + A+ + +  ++     +   F+T++ 
Sbjct: 448 ALRLWFLMLKRGVAPNEISCSTLLDGLFKAGKTEQALNLWKETLARGLAKNVITFNTVIN 507

Query: 546 KVADDGMTEEAYKLWQKLIEWK 567
            +   G   EA +L  ++ E +
Sbjct: 508 GLCKIGRMAEAEELLDRMKELR 529



 Score =  118 bits (295), Expect = 9e-24,   Method: Compositional matrix adjust.
 Identities = 62/204 (30%), Positives = 107/204 (52%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I GL +  RI  A  + + +     +PD  TY+ ++ G    G I  A +L D M  +G
Sbjct: 706 IIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLSAG 765

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P++ITYN+++  +  +GK  +A+  +     KG  P  ITY  LI++ CK+     A 
Sbjct: 766 LTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTEAF 825

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++   M  EG  P ++TY+ L+   C QG  ++A+ +++ ++   ++PN ITY TL+H  
Sbjct: 826 KLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIHGY 885

Query: 338 GSRGCWDAVDKILDIMNEASHSPT 361
              G  + + K+ D M+     PT
Sbjct: 886 IKSGNMEEISKLYDEMHIRGLLPT 909



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 62/207 (29%), Positives = 110/207 (53%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+   C  G++ DA  L + +  +  +PD     +LI G      I++A  +  +M+ 
Sbjct: 704 NVIIFGLCKSGRIADAKSLFESLRNKRFLPDNFTYSSLIHGCAASGSIDEAFSLRDVMLS 763

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P+ ITYN ++ GLCK G++  A+ L +++   G  P+ ITYNT++      GK  +
Sbjct: 764 AGLTPNIITYNSLIYGLCKSGKLSRAVNLFNKLQSKGISPNGITYNTLIDEYCKEGKTTE 823

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    +  + +G  P +ITY+ILI  +C Q  +  AI++LD M      P+ +TY +L++
Sbjct: 824 AFKLKQKMVEEGIQPTVITYSILIYGLCTQGYMEEAIKLLDQMIENNVDPNYITYCTLIH 883

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNS 327
              K G  ++   + + +  RG+ P +
Sbjct: 884 GYIKSGNMEEISKLYDEMHIRGLLPTN 910



 Score = 75.9 bits (185), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 46/175 (26%), Positives = 78/175 (44%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++    + G + +A  L D+M      P+     +LI GL +  ++ +A  + 
Sbjct: 734 DNFTYSSLIHGCAASGSIDEAFSLRDVMLSAGLTPNIITYNSLIYGLCKSGKLSRAVNLF 793

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +   G  P+ ITYN ++   CK G+   A  L  +M   G +P VITY+ ++  +   
Sbjct: 794 NKLQSKGISPNGITYNTLIDEYCKEGKTTEAFKLKQKMVEEGIQPTVITYSILIYGLCTQ 853

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
           G  ++AI      +     P  ITY  LI    K   +    ++ D+M I G  P
Sbjct: 854 GYMEEAIKLLDQMIENNVDPNYITYCTLIHGYIKSGNMEEISKLYDEMHIRGLLP 908


>gi|356551209|ref|XP_003543970.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 687

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 231/497 (46%), Gaps = 71/497 (14%)

Query: 143 MARRNQIPDFHFCINLIRGLI-RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           M  +  +PD   C  ++R L  R + I+ A +V  +MV  G  P  +TYN M+   CK+G
Sbjct: 157 MVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYNTMLDSFCKKG 216

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
            ++ A+ LL +M   GC P+ +TYN ++  +  +G+ +QA    +D LR G    + TY 
Sbjct: 217 MVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYD 276

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            LI   C++  I  A  + ++M   G  P +VTYN+++   CK G+  DA  +++ ++++
Sbjct: 277 PLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNK 336

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            + P+ ++YNTL++     G       +   +   S +P+V TYN LI+GLC+ G +D A
Sbjct: 337 NLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVA 396

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEG-----------MLNEALQ------------ 418
           +   ++M+     PD+ T+ T +   CK G           MLN  LQ            
Sbjct: 397 MRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 456

Query: 419 ------------LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
                       +   +      P LITYN  IDGL K G +++A  L  +M+ NG+ PD
Sbjct: 457 ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPD 516

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH---------------- 510
            +T+ ++I     A  + +A  L  E+  +G       Y ++IH                
Sbjct: 517 HVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFF 576

Query: 511 -------------------GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
                              GLCK +K+D A      M +    P+   ++ ++ +  + G
Sbjct: 577 EMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLG 636

Query: 552 MTEEAYKLWQKLIEWKV 568
             +EA +L++ +++ ++
Sbjct: 637 HWQEALRLYKDMLDREI 653



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 117/435 (26%), Positives = 211/435 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T N ++      G++  A +LI  M R       +    LIRG     +IE+AS++ 
Sbjct: 236 NDVTYNVLVNGLSHSGEMEQAKELIQDMLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLG 295

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G VP  +TYN ++ GLCK G++  A  LLD M      PD+++YNT++      
Sbjct: 296 EEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRL 355

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   + +   +   P ++TY  LI+ +C+   +  A+ + D+M   G  PD+ T+
Sbjct: 356 GNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTF 415

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            + V   CK G    A  + + +L+RG++P+   Y T +      G       + + M  
Sbjct: 416 TTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 475

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN+ I+GL K G +  A     +M+     PD VTY +++ A    G L +
Sbjct: 476 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRK 535

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   +      P ++TY  LI   A +G ++ A++ + +M E G+ P+ IT+  LI 
Sbjct: 536 ARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALIN 595

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  ++++A +   E+  +G       Y ++I+  C       A+++ + M+    +P
Sbjct: 596 GLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 655

Query: 536 DDTVFSTIVKKVADD 550
           D     +++K +  D
Sbjct: 656 DSCTHRSLLKHLNKD 670



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 114/367 (31%), Positives = 189/367 (51%), Gaps = 1/367 (0%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD-NGKFKQAIGFWKDQLRKGCPPYL 257
           K+  +   + +  +M   G  PDV   N +LR + D +     A   +   +  G  P +
Sbjct: 143 KKSLLEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTV 202

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +TY  +++  CK+  +  A+++L  M   GCSP+ VTYN LVN     G+ + A  +I +
Sbjct: 203 VTYNTMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQD 262

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +L  G+E +  TY+ L+     +G  +   ++ + M      PTV TYN ++ GLCK+G 
Sbjct: 263 MLRLGLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGR 322

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           V  A    + MV+KN  PD+V+YNT++    + G + EA  L   L   S +P ++TYNT
Sbjct: 323 VSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNT 382

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LIDGL + G ++ AM L  +M+++G  PD  T  T + GFC+   +  A +L  E+  RG
Sbjct: 383 LIDGLCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRG 442

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            +    AY   I G  K      A  + E M++  + PD   ++  +  +   G  +EA 
Sbjct: 443 LQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEAS 502

Query: 558 KLWQKLI 564
           +L +K++
Sbjct: 503 ELVKKML 509



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 113/413 (27%), Positives = 199/413 (48%), Gaps = 1/413 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +++ +C +G++ +AS+L + M  R  +P       ++ GL +  R+  A K+L +M
Sbjct: 274 TYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDARKLLDVM 333

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V    +PD ++YN ++ G  + G I  A  L  E+      P V+TYNT++  +   G  
Sbjct: 334 VNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDGLCRLGDL 393

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+    + ++ G  P + T+T  +   CK   +  A E+ D+M   G  PD   Y + 
Sbjct: 394 DVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITR 453

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K G    A  +   +L+RG  P+ ITYN  +  L   G      +++  M     
Sbjct: 454 IVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGL 513

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  +I+     G + +A   F +M+SK   P +VTY  ++ +    G L  A+ 
Sbjct: 514 VPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAIL 573

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               ++     P +ITYN LI+GL K   M++A   + +M   GISP+  T+  LI   C
Sbjct: 574 HFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYTYTILINENC 633

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
                +EA+ L K++  R  +  +  +R ++  L K  K+ + ++ LE +I++
Sbjct: 634 NLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNKDYKLHV-VRHLENVIAA 685



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 1/408 (0%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR-GQIRSAIALLDEMSVSGCEPDVITYN 226
           +EK   V   MV  G +PD    N ++  L  R   I  A  + + M   G  P V+TYN
Sbjct: 147 LEKCLLVFYKMVSKGLLPDVKNCNRVLRLLRDRDNNIDVAREVYNVMVECGICPTVVTYN 206

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           T+L +    G  ++A+         GC P  +TY +L+  +     + +A E++ DM   
Sbjct: 207 TMLDSFCKKGMVQEALQLLFQMQAMGCSPNDVTYNVLVNGLSHSGEMEQAKELIQDMLRL 266

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G    + TY+ L+   C++G+ ++A  +   +LSRG  P  +TYNT+++ L   G     
Sbjct: 267 GLEVSVYTYDPLIRGYCEKGQIEEASRLGEEMLSRGAVPTVVTYNTIMYGLCKWGRVSDA 326

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            K+LD+M   +  P + +YN LI G  + G +  A   F ++  ++  P +VTYNT++  
Sbjct: 327 RKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRYRSLAPSVVTYNTLIDG 386

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LC+ G L+ A++L   +      P + T+ T + G  K G +  A  L+ +M+  G+ PD
Sbjct: 387 LCRLGDLDVAMRLKDEMIKHGPDPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPD 446

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
              + T I G  +     +A  + +E+  RG       Y + I GL K   +  A ++++
Sbjct: 447 RFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVK 506

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            M+ +   PD   +++I+      G   +A  L+ +++   +F    T
Sbjct: 507 KMLYNGLVPDHVTYTSIIHAHLMAGHLRKARALFLEMLSKGIFPSVVT 554



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 88/305 (28%), Positives = 137/305 (44%), Gaps = 37/305 (12%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           GP  + D  T    ++ FC  G L  A +L D M  R   PD    I  I G +++    
Sbjct: 407 GP--DPDVFTFTTFVRGFCKMGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPS 464

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           KA  + + M+  G  PD ITYN+ + GL K G ++ A  L+ +M  +G  PD +TY +I+
Sbjct: 465 KAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSII 524

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                 G  ++A   + + L KG  P ++TYT+LI     +  +  AI    +M  +G  
Sbjct: 525 HAHLMAGHLRKARALFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVH 584

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P+++TYN+L+N  CK  K D A      + ++G+ PN  T                    
Sbjct: 585 PNVITYNALINGLCKVRKMDQAYNFFAEMQAKGISPNKYT-------------------- 624

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
                          Y ILIN  C  G    A+  +  M+ +  QPD  T+ ++L  L K
Sbjct: 625 ---------------YTILINENCNLGHWQEALRLYKDMLDREIQPDSCTHRSLLKHLNK 669

Query: 410 EGMLN 414
           +  L+
Sbjct: 670 DYKLH 674


>gi|297809467|ref|XP_002872617.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318454|gb|EFH48876.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 584

 Score =  201 bits (511), Expect = 8e-49,   Method: Compositional matrix adjust.
 Identities = 120/393 (30%), Positives = 200/393 (50%), Gaps = 2/393 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+G      IEK+  +L  +   G  P+ + Y  ++ G CK+G+I  A  L  EM   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              +  TY  ++  +F NG  KQ    ++     G  P L TY  ++ Q+CK      A 
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAF 288

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +V D+M   G S +IVTYN+L+   C++ K ++A  V++ + S G+ PN ITYNTL+   
Sbjct: 289 KVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGF 348

Query: 338 -GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
            G R    A+    D+ +    SP++ TYNIL++G CK G    A     +M  +  +P 
Sbjct: 349 CGVRKLGKALSLCRDLKSRGL-SPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPS 407

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            VTY  ++    +   + +A+QL   +     +P + TY+ LI G   KG M +A  L+ 
Sbjct: 408 KVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFK 467

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            M+E    P+++ + T++ G+C+      A+ L +E+ ++      ++YR +I  LCK +
Sbjct: 468 SMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKER 527

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           K   A  ++E MI S   P D++ + I +   D
Sbjct: 528 KSKEAEGLVEKMIDSGIGPSDSILNLISRAKND 560



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 106/382 (27%), Positives = 192/382 (50%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           V D  ++ +++ G C+ G+I  +  LL E+   G  P+V+ Y T++      G+ ++A  
Sbjct: 160 VLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            + +  + G      TYT+LI  + K     +  E+ + M   G  P++ TYN ++N  C
Sbjct: 220 LFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLC 279

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K G+  DA  V + +  RG+  N +TYNTL+  L      +  ++++D M     +P + 
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLI 339

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN LI+G C    + +A++    + S+   P +VTYN ++   CK+G  + A +++  +
Sbjct: 340 TYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P  +TY  LID  A+   MEKA+ L   M E G++PD  T+  LI GFC   ++
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRM 459

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            EA  L K + ++  +     Y  ++ G CK      A+++   M      P+   +  +
Sbjct: 460 NEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           ++ +  +  ++EA  L +K+I+
Sbjct: 520 IEVLCKERKSKEAEGLVEKMID 541



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 107/378 (28%), Positives = 188/378 (49%), Gaps = 1/378 (0%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++    +   + S+I   +EM   G  P    +N +L  +  +  F Q   F+ +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            K     + ++ I+I+  C+   I ++ ++L ++   G SP++V Y +L++  CK+G+ +
Sbjct: 157 IKVVLD-VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A  +   +   G+  N  TY  L+H L   G      ++ + M E    P + TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVM 275

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           N LCK G    A   F++M  +    +IVTYNT++G LC+E   NEA +++  +     +
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGIN 335

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P LITYNTLIDG      + KA+ L   +   G+SP  +T+  L+ GFC+      A  +
Sbjct: 336 PNLITYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKV 395

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           +KE+ +RG K     Y ++I    +S  ++ AIQ+   M      PD   +S ++     
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCI 455

Query: 550 DGMTEEAYKLWQKLIEWK 567
            G   EA +L++ ++E K
Sbjct: 456 KGRMNEASRLFKSMVEKK 473



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 100/375 (26%), Positives = 188/375 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C  G++  +  L+  +      P+      LI G  +   IEKA  +   M   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V +  TY +++ GL K G  +    + ++M   G  P++ TYN ++  +  +G+ K A 
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAF 288

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   +G    ++TY  LI  +C++     A EV+D M  +G +P+++TYN+L++  
Sbjct: 289 KVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGF 348

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C   K   A+ +  +L SRG+ P+ +TYN L+     +G      K++  M E    P+ 
Sbjct: 349 CGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY ILI+   +   +++AI   + M      PD+ TY+ ++   C +G +NEA +L   
Sbjct: 409 VTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKS 468

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  + YNT++ G  K+G   +A+ L+ +M E  + P+  ++R +I   C+  +
Sbjct: 469 MVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528

Query: 483 VEEAVDLLKEIGKRG 497
            +EA  L++++   G
Sbjct: 529 SKEAEGLVEKMIDSG 543



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 84/315 (26%), Positives = 147/315 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T   ++      G      ++ + M      P+ H    ++  L +  R + A KV 
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLHTYNCVMNQLCKDGRTKDAFKVF 291

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G   + +TYN ++GGLC+  +   A  ++D+M   G  P++ITYNT++      
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANEVMDQMKSDGINPNLITYNTLIDGFCGV 351

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  +A+   +D   +G  P L+TY IL+   CK+   + A +V+ +M   G  P  VTY
Sbjct: 352 RKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKVTY 411

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L++   +    + A+ + +++   G+ P+  TY+ L+H    +G  +   ++   M E
Sbjct: 412 TILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRMNEASRLFKSMVE 471

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    YN ++ G CK G   RA+  F +M  K   P++ +Y  ++  LCKE    E
Sbjct: 472 KKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERKSKE 531

Query: 416 ALQLLHLLNGSSCSP 430
           A  L+  +  S   P
Sbjct: 532 AEGLVEKMIDSGIGP 546



 Score = 82.4 bits (202), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 56/239 (23%), Positives = 101/239 (42%), Gaps = 5/239 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC   KL  A  L   +  R   P       L+ G  +      A KV++ M
Sbjct: 340 TYNTLIDGFCGVRKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P  +TY +++    +   +  AI L   M   G  PDV TY+ ++      G+ 
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMEKAIQLRSSMEELGLTPDVHTYSVLIHGFCIKGRM 459

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +K  + K   P  + Y  ++   CK+    RA+ +  +M  +   P++ +Y  +
Sbjct: 460 NEASRLFKSMVEKKFEPNEVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +   CK+ K  +A  ++  ++  G+ P+    N +     SR   D+  + +D    AS
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDSGIGPSDSILNLI-----SRAKNDSHSRSMDEEEPAS 573



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 53/262 (20%), Positives = 103/262 (39%), Gaps = 51/262 (19%)

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           Y  A  ++  ++S  ++    T ++LLH L                +E S + +   Y +
Sbjct: 55  YSHAQSLLLQVISGKIQSQFFTSSSLLHYLTE--------------SETSKTKSRL-YEV 99

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +IN   +   +D +I  FN+MV K   P    +N +L  +      N   Q     N S 
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFN---QWWCFFNESK 156

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
               L  Y+    G+  KGC                              C A ++E++ 
Sbjct: 157 IKVVLDVYSF---GIVIKGC------------------------------CEAGEIEKSF 183

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           DLL E+ + G       Y  +I G CK  +++ A  +   M       ++  ++ ++  +
Sbjct: 184 DLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGL 243

Query: 548 ADDGMTEEAYKLWQKLIEWKVF 569
             +G+ ++ +++++K+ E  VF
Sbjct: 244 FKNGIKKQGFEMYEKMQEHGVF 265


>gi|145360025|ref|NP_179305.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|122223754|sp|Q0WPZ6.1|PP158_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At2g17140
 gi|110737729|dbj|BAF00803.1| hypothetical protein [Arabidopsis thaliana]
 gi|330251496|gb|AEC06590.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 874

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 133/468 (28%), Positives = 223/468 (47%), Gaps = 30/468 (6%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ +FC  G+  D+ K+++ M     +PD     + I  L +  ++  AS++   M +
Sbjct: 221 NTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDMEL 280

Query: 181 SGGV----PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
              +    P++ITYN+M+ G CK G +  A  L + +  +     + +YN  L+ +  +G
Sbjct: 281 DEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHG 340

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           KF +A    K    KG  P + +Y IL++ +CK   ++ A  ++  M   G  PD VTY 
Sbjct: 341 KFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYG 400

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L++  C  GK D A  ++  ++     PN+ T N LLHSL   G     +++L  MNE 
Sbjct: 401 CLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEK 460

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAI------------------NSF-----NQMVSKNC 393
            +     T NI+++GLC  G +D+AI                  NS+     + ++  NC
Sbjct: 461 GYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDSLIENNC 520

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD++TY+T+L  LCK G   EA  L   + G    P  + YN  I    K+G +  A  
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +   M + G      T+ +LI G    +Q+ E   L+ E+ ++G       Y   I  LC
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVK---KVADDGMTEEAYK 558
           + +KV+ A  +L+ M+     P+   F  +++   KV D  M +E ++
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFE 688



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 135/457 (29%), Positives = 224/457 (49%), Gaps = 14/457 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+ FC  G L DA  L + +   + +         ++GL+R  +  +A  VL+ M
Sbjct: 293 TYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVRHGKFIEAETVLKQM 352

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P   +YN+++ GLCK G +  A  ++  M  +G  PD +TY  +L      GK 
Sbjct: 353 TDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVTYGCLLHGYCSVGKV 412

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    ++ +R  C P   T  IL+  + K   I+ A E+L  M  +G   D VT N +
Sbjct: 413 DAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELLRKMNEKGYGLDTVTCNII 472

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  C  G+ D A+ ++  +   G        +  L +LG+      +  + D + E + 
Sbjct: 473 VDGLCGSGELDKAIEIVKGMRVHG--------SAALGNLGN----SYIGLVDDSLIENNC 520

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TY+ L+NGLCK G    A N F +M+ +  QPD V YN  +   CK+G ++ A +
Sbjct: 521 LPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGKISSAFR 580

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +    C   L TYN+LI GL  K  + +   L  +M E GISP+  T+ T I   C
Sbjct: 581 VLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAIQYLC 640

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
             ++VE+A +LL E+ ++       +++ +I   CK    DMA +V E  +S      + 
Sbjct: 641 EGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSI-CGQKEG 699

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           ++S +  ++   G   +A +L + +++ + FE GT L
Sbjct: 700 LYSLMFNELLAAGQLLKATELLEAVLD-RGFELGTFL 735



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 208/452 (46%), Gaps = 25/452 (5%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E  ++ +N IL +   + KL+    ++ I A+ N I        L+R     ++      
Sbjct: 56  EEIQELHNLILSSSIQKTKLSSLLSVVSIFAKSNHIDKAFPQFQLVRSRFPENK------ 109

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
                      P    YN+++    K  ++     L  +M + G  P   T+N ++R + 
Sbjct: 110 -----------PSVYLYNLLLESCIKERRVEFVSWLYKDMVLCGIAPQTYTFNLLIRALC 158

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           D+     A   + +   KGC P   T+ IL+   CK     + +E+L+ M   G  P+ V
Sbjct: 159 DSSCVDAARELFDEMPEKGCKPNEFTFGILVRGYCKAGLTDKGLELLNAMESFGVLPNKV 218

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            YN++V+  C++G+ DD+  ++  +   G+ P+ +T+N+ + +L   G      +I   M
Sbjct: 219 IYNTIVSSFCREGRNDDSEKMVEKMREEGLVPDIVTFNSRISALCKEGKVLDASRIFSDM 278

Query: 354 NEASH----SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
               +     P   TYN+++ G CK GL++ A   F  +   +    + +YN  L  L +
Sbjct: 279 ELDEYLGLPRPNSITYNLMLKGFCKVGLLEDAKTLFESIRENDDLASLQSYNIWLQGLVR 338

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G   EA  +L  +      P + +YN L+DGL K G +  A  + G M  NG+ PD +T
Sbjct: 339 HGKFIEAETVLKQMTDKGIGPSIYSYNILMDGLCKLGMLSDAKTIVGLMKRNGVCPDAVT 398

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY--RLVIHGLCKSKKVDMAIQVLEL 527
           +  L+ G+C   +V+ A  LL+E+  R N + N AY   +++H L K  ++  A ++L  
Sbjct: 399 YGCLLHGYCSVGKVDAAKSLLQEM-MRNNCLPN-AYTCNILLHSLWKMGRISEAEELLRK 456

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           M    Y  D    + IV  +   G  ++A ++
Sbjct: 457 MNEKGYGLDTVTCNIIVDGLCGSGELDKAIEI 488



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 116/418 (27%), Positives = 191/418 (45%), Gaps = 30/418 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +L  +CS GK+  A  L+  M R N +P+ + C  L+  L ++ RI +A ++L
Sbjct: 395 DAVTYGCLLHGYCSVGKVDAAKSLLQEMMRNNCLPNAYTCNILLHSLWKMGRISEAEELL 454

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG------------------ 217
           + M   G   DT+T N++V GLC  G++  AI ++  M V G                  
Sbjct: 455 RKMNEKGYGLDTVTCNIIVDGLCGSGELDKAIEIVKGMRVHGSAALGNLGNSYIGLVDDS 514

Query: 218 -----CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
                C PD+ITY+T+L  +   G+F +A   + + + +   P  + Y I I   CKQ  
Sbjct: 515 LIENNCLPDLITYSTLLNGLCKAGRFAEAKNLFAEMMGEKLQPDSVAYNIFIHHFCKQGK 574

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           I+ A  VL DM  +GC   + TYNSL+     + +  +   +++ +  +G+ PN  TYNT
Sbjct: 575 ISSAFRVLKDMEKKGCHKSLETYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNT 634

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
            +  L      +    +LD M + + +P VF++  LI   CK    D A   F   VS  
Sbjct: 635 AIQYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVFETAVSIC 694

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
            Q + + Y+ +   L   G L +A +LL  +           Y  L++ L KK  +E A 
Sbjct: 695 GQKEGL-YSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVAS 753

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL------LKEIGKRGNKMRNSA 504
            +  +M++ G   D      +I G  +    +EA         +  +G+  NK+  +A
Sbjct: 754 GILHKMIDRGYGFDPAALMPVIDGLGKMGNKKEANSFADKMMEMASVGEVANKVDPNA 811



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 66/276 (23%), Positives = 112/276 (40%), Gaps = 37/276 (13%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  ++ D    N  + +FC +GK++ A +++  M ++                       
Sbjct: 552 GEKLQPDSVAYNIFIHHFCKQGKISSAFRVLKDMEKKG---------------------- 589

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
              K L+            TYN ++ GL  + QI     L+DEM   G  P++ TYNT +
Sbjct: 590 -CHKSLE------------TYNSLILGLGIKNQIFEIHGLMDEMKEKGISPNICTYNTAI 636

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           + + +  K + A     + ++K   P + ++  LIE  CK      A EV  + A+  C 
Sbjct: 637 QYLCEGEKVEDATNLLDEMMQKNIAPNVFSFKYLIEAFCKVPDFDMAQEVF-ETAVSICG 695

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
                Y+ + N     G+   A  ++  +L RG E  +  Y  L+ SL  +   +    I
Sbjct: 696 QKEGLYSLMFNELLAAGQLLKATELLEAVLDRGFELGTFLYKDLVESLCKKDELEVASGI 755

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           L  M +  +         +I+GL K G    A NSF
Sbjct: 756 LHKMIDRGYGFDPAALMPVIDGLGKMGNKKEA-NSF 790


>gi|15226583|ref|NP_179165.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75216226|sp|Q9ZQF1.1|PP152_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At2g15630, mitochondrial; Flags: Precursor
 gi|4335729|gb|AAD17407.1| putative salt-inducible protein [Arabidopsis thaliana]
 gi|330251331|gb|AEC06425.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 627

 Score =  201 bits (511), Expect = 9e-49,   Method: Compositional matrix adjust.
 Identities = 127/436 (29%), Positives = 217/436 (49%), Gaps = 3/436 (0%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C    + +A +   +M  +   P    C +++  L R++RIE A      M       + 
Sbjct: 166 CQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYADMYRMEIKSNV 225

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            T+N+M+  LCK G+++ A   L  M V G +P ++TYNT+++     G+ + A     +
Sbjct: 226 YTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGARLIISE 285

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
              KG  P + TY  ++  +C +    RA EVL +M   G  PD V+YN L+      G 
Sbjct: 286 MKSKGFQPDMQTYNPILSWMCNE---GRASEVLREMKEIGLVPDSVSYNILIRGCSNNGD 342

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            + A    + ++ +GM P   TYNTL+H L      +A + ++  + E        TYNI
Sbjct: 343 LEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDSVTYNI 402

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING C++G   +A    ++M++   QP   TY +++  LC++    EA +L   + G  
Sbjct: 403 LINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEKVVGKG 462

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P L+  NTL+DG    G M++A  L  +M    I+PDD+T+  L+ G C   + EEA 
Sbjct: 463 MKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGKFEEAR 522

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +L+ E+ +RG K  + +Y  +I G  K      A  V + M+S  + P    ++ ++K +
Sbjct: 523 ELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNALLKGL 582

Query: 548 ADDGMTEEAYKLWQKL 563
           + +   E A +L +++
Sbjct: 583 SKNQEGELAEELLREM 598



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 121/407 (29%), Positives = 205/407 (50%), Gaps = 6/407 (1%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M  ++ +  F+  IN+   L +  +++KA   L IM + G  P  +TYN +V G   RG+
Sbjct: 219 MEIKSNVYTFNIMINV---LCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGR 275

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           I  A  ++ EM   G +PD+ TYN IL  M + G+  + +   K+    G  P  ++Y I
Sbjct: 276 IEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEI---GLVPDSVSYNI 332

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI        +  A    D+M  +G  P   TYN+L++    + K + A ++I  +  +G
Sbjct: 333 LIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 392

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +  +S+TYN L++     G       + D M      PT FTY  LI  LC+      A 
Sbjct: 393 IVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREAD 452

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             F ++V K  +PD+V  NT++   C  G ++ A  LL  ++  S +P  +TYN L+ GL
Sbjct: 453 ELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGL 512

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
             +G  E+A  L G+M   GI PD I++ TLI G+ +    + A  +  E+   G     
Sbjct: 513 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTL 572

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             Y  ++ GL K+++ ++A ++L  M S    P+D+ F ++++ +++
Sbjct: 573 LTYNALLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSN 619



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 117/409 (28%), Positives = 201/409 (49%), Gaps = 5/409 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++++  T N ++   C  GKL  A   + IM      P       L++G     RIE A 
Sbjct: 221 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRGRIEGAR 280

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M   G  PD  TYN ++  +C  G+   A  +L EM   G  PD ++YN ++R  
Sbjct: 281 LIISEMKSKGFQPDMQTYNPILSWMCNEGR---ASEVLREMKEIGLVPDSVSYNILIRGC 337

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            +NG  + A  +  + +++G  P   TY  LI  +  +  I  A  ++ ++  +G   D 
Sbjct: 338 SNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 397

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN L+N  C+ G    A  + + +++ G++P   TY +L++ L  +      D++ + 
Sbjct: 398 VTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREADELFEK 457

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +      P +   N L++G C  G +DRA +   +M   +  PD VTYN ++  LC EG 
Sbjct: 458 VVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRGLCGEGK 517

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             EA +L+  +      P  I+YNTLI G +KKG  + A ++  +M+  G +P  +T+  
Sbjct: 518 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFMVRDEMLSLGFNPTLLTYNA 577

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK--SKKVD 519
           L+ G  +  + E A +LL+E+   G    +S++  VI  +    +KK D
Sbjct: 578 LLKGLSKNQEGELAEELLREMKSEGIVPNDSSFCSVIEAMSNLDAKKSD 626



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 108/377 (28%), Positives = 184/377 (48%), Gaps = 3/377 (0%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           TI ++++V   C+   +  AI     M   G  P   T N IL  +    + + A  F+ 
Sbjct: 155 TILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWVFYA 214

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           D  R      + T+ I+I  +CK+  + +A   L  M + G  P IVTYN+LV     +G
Sbjct: 215 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFSLRG 274

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           + + A L+I+ + S+G +P+  TYN +L  + + G      ++L  M E    P   +YN
Sbjct: 275 RIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEG---RASEVLREMKEIGLVPDSVSYN 331

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           ILI G    G ++ A    ++MV +   P   TYNT++  L  E  +  A  L+  +   
Sbjct: 332 ILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 391

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
                 +TYN LI+G  + G  +KA  L+ +MM +GI P   T+ +LI+  CR ++  EA
Sbjct: 392 GIVLDSVTYNILINGYCQHGDAKKAFALHDEMMTDGIQPTQFTYTSLIYVLCRKNKTREA 451

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            +L +++  +G K        ++ G C    +D A  +L+ M      PDD  ++ +++ 
Sbjct: 452 DELFEKVVGKGMKPDLVMMNTLMDGHCAIGNMDRAFSLLKEMDMMSINPDDVTYNCLMRG 511

Query: 547 VADDGMTEEAYKLWQKL 563
           +  +G  EEA +L  ++
Sbjct: 512 LCGEGKFEEARELMGEM 528



 Score = 84.7 bits (208), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 59/242 (24%), Positives = 114/242 (47%), Gaps = 8/242 (3%)

Query: 329 TYNTLLHSLGSRGC--WDAVDKILD---IMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           T +T+L  L  R C     VD+ ++   +M E    P   T N ++  L +   ++ A  
Sbjct: 152 TKSTILFDLLVRCCCQLRMVDEAIECFYLMKEKGFYPKTETCNHILTLLSRLNRIENAWV 211

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            +  M     + ++ T+N ++  LCKEG L +A   L ++      P ++TYNTL+ G +
Sbjct: 212 FYADMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMEVFGIKPTIVTYNTLVQGFS 271

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
            +G +E A ++  +M   G  PD  T+  ++   C   +  E +  +KEIG   + +   
Sbjct: 272 LRGRIEGARLIISEMKSKGFQPDMQTYNPILSWMCNEGRASEVLREMKEIGLVPDSV--- 328

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +Y ++I G   +  ++MA    + M+     P    ++T++  +  +   E A  L +++
Sbjct: 329 SYNILIRGCSNNGDLEMAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREI 388

Query: 564 IE 565
            E
Sbjct: 389 RE 390


>gi|15234349|ref|NP_194530.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75208278|sp|Q9SUD8.1|PP340_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g28010
 gi|4455360|emb|CAB36770.1| putative protein [Arabidopsis thaliana]
 gi|7269655|emb|CAB79603.1| putative protein [Arabidopsis thaliana]
 gi|332660020|gb|AEE85420.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 704

 Score =  201 bits (511), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 127/443 (28%), Positives = 228/443 (51%), Gaps = 37/443 (8%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+   +++ +   A  VL +M+  G   +   +N+++ GLC+  +   A++LL EM  + 
Sbjct: 113 LLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNS 172

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PDV +YNT++R   +  + ++A+    +    GC   L+T+ ILI+  CK   +  A+
Sbjct: 173 LMPDVFSYNTVIRGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAM 232

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
             L +M   G   D+V Y SL+   C  G+ D    + + +L RG  P +ITYNTL+   
Sbjct: 233 GFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGF 292

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      +I + M E    P V+TY  LI+GLC  G    A+   N M+ K+ +P+ 
Sbjct: 293 CKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNA 352

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTYN ++  LCK+G++ +A++++ L+      P  ITYN L+ GL  KG +++A  L   
Sbjct: 353 VTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYL 412

Query: 458 MMENG--ISPDDITHRTLIWGFCRADQVEEAVD----LLKEIG---------------KR 496
           M+++     PD I++  LI G C+ +++ +A+D    L++++G               K 
Sbjct: 413 MLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKA 472

Query: 497 G--NK-------------MRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           G  NK             +RNS  Y  +I G CK+  +++A  +L  M  S  +P    +
Sbjct: 473 GDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVSELQPSVFDY 532

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++  +  +G  ++A++L++++
Sbjct: 533 NCLLSSLCKEGSLDQAWRLFEEM 555



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/429 (29%), Positives = 217/429 (50%), Gaps = 6/429 (1%)

Query: 120 NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           +N +L+  C   +   A  L+  M R + +PD      +IRG      +EKA ++   M 
Sbjct: 145 HNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKALELANEMK 204

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            SG     +T+ +++   CK G++  A+  L EM   G E D++ Y +++R   D G+  
Sbjct: 205 GSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELD 264

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +    + + L +G  P  ITY  LI   CK   +  A E+ + M   G  P++ TY  L+
Sbjct: 265 RGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLI 324

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  C  GK  +A+ ++N ++ +  EPN++TYN +++ L   G      +I+++M +    
Sbjct: 325 DGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTR 384

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMV--SKNCQPDIVTYNTVLGALCKEGMLNEAL 417
           P   TYNIL+ GLC  G +D A      M+  S    PD+++YN ++  LCKE  L++AL
Sbjct: 385 PDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQAL 444

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +  LL     +   +T N L++   K G + KAM L+ Q+ ++ I  +  T+  +I GF
Sbjct: 445 DIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGF 504

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSA--YRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           C+   +  A  LL ++  R ++++ S   Y  ++  LCK   +D A ++ E M      P
Sbjct: 505 CKTGMLNVAKGLLCKM--RVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562

Query: 536 DDTVFSTIV 544
           D   F+ ++
Sbjct: 563 DVVSFNIMI 571



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/445 (27%), Positives = 216/445 (48%), Gaps = 2/445 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC  GK+ +A   +  M       D     +LIRG      +++   +   ++  G
Sbjct: 218 LIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERG 277

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P  ITYN ++ G CK GQ++ A  + + M   G  P+V TY  ++  +   GK K+A+
Sbjct: 278 DSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEAL 337

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 + K   P  +TY I+I ++CK   +A A+E+++ M      PD +TYN L+   
Sbjct: 338 QLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGL 397

Query: 303 CKQGKYDDAVLVINNLL--SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
           C +G  D+A  ++  +L  S   +P+ I+YN L+H L           I D++ E   + 
Sbjct: 398 CAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAG 457

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T NIL+N   K G V++A+  + Q+       +  TY  ++   CK GMLN A  LL
Sbjct: 458 DRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLL 517

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  S   P +  YN L+  L K+G +++A  L+ +M  +   PD ++   +I G  +A
Sbjct: 518 CKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKA 577

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             ++ A  LL  + + G       Y  +I+   K   +D AI   + M+ S ++PD  + 
Sbjct: 578 GDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHIC 637

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
            +++K     G T++  +L +KL++
Sbjct: 638 DSVLKYCISQGETDKLTELVKKLVD 662



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 110/423 (26%), Positives = 202/423 (47%), Gaps = 2/423 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           NL+  L+R    E A    + M+ +    + ++ + ++    +  +   A  +L  M   
Sbjct: 77  NLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFAFGVLALMLKR 136

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G   +V  +N +L+ +  N +  +A+   ++  R    P + +Y  +I   C+   + +A
Sbjct: 137 GFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRGFCEGKELEKA 196

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           +E+ ++M   GCS  +VT+  L++  CK GK D+A+  +  +   G+E + + Y +L+  
Sbjct: 197 LELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEADLVVYTSLIRG 256

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               G  D    + D + E   SP   TYN LI G CK G +  A   F  M+ +  +P+
Sbjct: 257 FCDCGELDRGKALFDEVLERGDSPCAITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPN 316

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           + TY  ++  LC  G   EALQLL+L+      P  +TYN +I+ L K G +  A+ +  
Sbjct: 317 VYTYTGLIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVE 376

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCK 514
            M +    PD+IT+  L+ G C    ++EA  LL  + K  +       +Y  +IHGLCK
Sbjct: 377 LMKKRRTRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCK 436

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             ++  A+ + +L++      D    + ++      G   +A +LW+++ + K+     T
Sbjct: 437 ENRLHQALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDT 496

Query: 575 LLA 577
             A
Sbjct: 497 YTA 499



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 93/363 (25%), Positives = 177/363 (48%), Gaps = 11/363 (3%)

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           Q+++A+++  +   SG        N ++  +  +   + A  F++  L        ++ +
Sbjct: 53  QLKNAVSVFQQAVDSGSSL-AFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLS 111

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            L+E   +      A  VL  M   G + ++  +N L+   C+  +   AV ++  +   
Sbjct: 112 GLLECYVQMRKTGFAFGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRN 171

Query: 322 GMEPNSITYNTLLHSLGSRGCWDA--VDKILDIMNEASHSP---TVFTYNILINGLCKYG 376
            + P+  +YNT++     RG  +   ++K L++ NE   S    ++ T+ ILI+  CK G
Sbjct: 172 SLMPDVFSYNTVI-----RGFCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAG 226

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +D A+    +M     + D+V Y +++   C  G L+    L   +     SPC ITYN
Sbjct: 227 KMDEAMGFLKEMKFMGLEADLVVYTSLIRGFCDCGELDRGKALFDEVLERGDSPCAITYN 286

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           TLI G  K G +++A  ++  M+E G+ P+  T+  LI G C   + +EA+ LL  + ++
Sbjct: 287 TLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTGLIDGLCGVGKTKEALQLLNLMIEK 346

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
             +     Y ++I+ LCK   V  A++++ELM   R +PD+  ++ ++  +   G  +EA
Sbjct: 347 DEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDLDEA 406

Query: 557 YKL 559
            KL
Sbjct: 407 SKL 409



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 95/370 (25%), Positives = 165/370 (44%), Gaps = 41/370 (11%)

Query: 98  KKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN 157
           K   D  L   D P       T N +++ FC  G+L +AS++ + M  R   P+ +    
Sbjct: 267 KALFDEVLERGDSPCA----ITYNTLIRGFCKLGQLKEASEIFEFMIERGVRPNVYTYTG 322

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL  + + ++A ++L +M+     P+ +TYN+++  LCK G +  A+ +++ M    
Sbjct: 323 LIDGLCGVGKTKEALQLLNLMIEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRR 382

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIAR 275
             PD ITYN +L  +   G   +A       L+      P +I+Y  LI  +CK+  + +
Sbjct: 383 TRPDNITYNILLGGLCAKGDLDEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQ 442

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-------------------LVIN 316
           A+++ D +  +  + D VT N L+N + K G  + A+                    +I+
Sbjct: 443 ALDIYDLLVEKLGAGDRVTTNILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMID 502

Query: 317 NLLSRGM----------------EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                GM                +P+   YN LL SL   G  D   ++ + M   ++ P
Sbjct: 503 GFCKTGMLNVAKGLLCKMRVSELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFP 562

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V ++NI+I+G  K G +  A +    M      PD+ TY+ ++    K G L+EA+   
Sbjct: 563 DVVSFNIMIDGSLKAGDIKSAESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFF 622

Query: 421 HLLNGSSCSP 430
             +  S   P
Sbjct: 623 DKMVDSGFEP 632



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 76/337 (22%), Positives = 142/337 (42%), Gaps = 41/337 (12%)

Query: 113 VENDEKTN----NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           +E DE+ N    N I+   C  G + DA +++++M +R   PD      L+ GL     +
Sbjct: 344 IEKDEEPNAVTYNIIINKLCKDGLVADAVEIVELMKKRRTRPDNITYNILLGGLCAKGDL 403

Query: 169 EKASKVLQIMVMSGGV--PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           ++ASK+L +M+       PD I+YN ++ GLCK  ++  A+ + D +       D +T N
Sbjct: 404 DEASKLLYLMLKDSSYTDPDVISYNALIHGLCKENRLHQALDIYDLLVEKLGAGDRVTTN 463

Query: 227 TILRTMFDNGKFKQAIGFWKD--------------------------QLRKGC------- 253
            +L +    G   +A+  WK                            + KG        
Sbjct: 464 ILLNSTLKAGDVNKAMELWKQISDSKIVRNSDTYTAMIDGFCKTGMLNVAKGLLCKMRVS 523

Query: 254 --PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
              P +  Y  L+  +CK+  + +A  + ++M  +   PD+V++N +++ S K G    A
Sbjct: 524 ELQPSVFDYNCLLSSLCKEGSLDQAWRLFEEMQRDNNFPDVVSFNIMIDGSLKAGDIKSA 583

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             ++  +   G+ P+  TY+ L++     G  D      D M ++   P     + ++  
Sbjct: 584 ESLLVGMSRAGLSPDLFTYSKLINRFLKLGYLDEAISFFDKMVDSGFEPDAHICDSVLKY 643

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
               G  D+      ++V K+   D     TV+  +C
Sbjct: 644 CISQGETDKLTELVKKLVDKDIVLDKELTCTVMDYMC 680



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 48/209 (22%), Positives = 99/209 (47%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           S S   F  N L+  L +    + A + + +M+  +   + V+ + +L    +      A
Sbjct: 67  SGSSLAFAGNNLMAKLVRSRNHELAFSFYRKMLETDTFINFVSLSGLLECYVQMRKTGFA 126

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             +L L+     +  +  +N L+ GL +     KA+ L  +M  N + PD  ++ T+I G
Sbjct: 127 FGVLALMLKRGFAFNVYNHNILLKGLCRNLECGKAVSLLREMRRNSLMPDVFSYNTVIRG 186

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           FC   ++E+A++L  E+   G       + ++I   CK+ K+D A+  L+ M     + D
Sbjct: 187 FCEGKELEKALELANEMKGSGCSWSLVTWGILIDAFCKAGKMDEAMGFLKEMKFMGLEAD 246

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             V++++++   D G  +    L+ +++E
Sbjct: 247 LVVYTSLIRGFCDCGELDRGKALFDEVLE 275


>gi|357137687|ref|XP_003570431.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Brachypodium distachyon]
          Length = 938

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 130/458 (28%), Positives = 235/458 (51%), Gaps = 15/458 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKV 174
           D  + N ++  F  +G L   + L ++  R   +P     +N ++ GL R  R+++A+ +
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPEALLAEMCKR--GVPFDAVTVNTVLVGLCRDGRVDRAAAL 159

Query: 175 LQIMVMSGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++MV  GG+   D + +N +V G CK G + +A A+ + M   G   DV+ YN+++  +
Sbjct: 160 AEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGL 219

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A        R G  P ++TYT+ I + C++  +  A  + ++M  +G  PD+
Sbjct: 220 CRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDV 279

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG--SRGCWDAVDKIL 350
           VT ++LV   CK G++ +A  +   +   G  PN +TY  L+ +L    RG     ++ L
Sbjct: 280 VTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRG-----NESL 334

Query: 351 DIMNEASHSPTVF---TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            ++ E      V     Y  L++ LCK G +D A + F   +S N  P+ VTY  ++ AL
Sbjct: 335 SLLGEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDAL 394

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CK G ++ A Q+L  +   S SP ++T++++I+GL K+G + KA     +M E GI P+ 
Sbjct: 395 CKAGNVDGAEQVLSEMEEKSISPNVVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNV 454

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+ T+I G  +    E A+D+  E+   G ++       +++GL K+ K++ A  +   
Sbjct: 455 VTYGTVIDGSFKCLGQEAALDVYHEMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFRE 514

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           M       D   ++T++  +   G    A+K+ Q+L E
Sbjct: 515 MNERGVLLDHVNYTTLIDGLFKTGNLPAAFKVGQELTE 552



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 132/486 (27%), Positives = 227/486 (46%), Gaps = 35/486 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +  T    +  +C R  + DA  L + M R+  +PD      L+ GL +  R  +A 
Sbjct: 240 VEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDVVTLSALVGGLCKDGRFSEAY 299

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M   G  P+ +TY M++  L K  +   +++LL E+   G   D+I Y  ++  +
Sbjct: 300 ALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLLGEVVSRGVVMDLIMYTALMDWL 359

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK  +A   ++  L     P  +TYT+LI+ +CK   +  A +VL +M  +  SP++
Sbjct: 360 CKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPNV 419

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT-------------------- 332
           VT++S++N   K+G    A   +  +  RG++PN +TY T                    
Sbjct: 420 VTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYHE 479

Query: 333 ---------------LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
                          L++ L   G  +  + +   MNE         Y  LI+GL K G 
Sbjct: 480 MLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGN 539

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +  A     ++  KN  PD V YN  +  LC  G   EA   L  +  +   P  +TYNT
Sbjct: 540 LPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNT 599

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +I   +++G   KA+ L   M  + I P+ IT+ TLI G   A  VE+A  LL E+   G
Sbjct: 600 MIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSG 659

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
               +  +R V+    + ++ D+ +++ E M+++    D TV++T+V+ +  +GMT +A 
Sbjct: 660 FSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAM 719

Query: 558 KLWQKL 563
            + +++
Sbjct: 720 VVLEEM 725



 Score =  194 bits (494), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 125/452 (27%), Positives = 221/452 (48%), Gaps = 2/452 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE ++   + ++      GK+  A  L   M  R  + D      LI GL +   +  A 
Sbjct: 485 VEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTGNLPAAF 544

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KV Q +     +PD + YN+ +  LC  G+ + A + L+EM  +G +PD +TYNT++   
Sbjct: 545 KVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYNTMIAAQ 604

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK  +A+       R    P LITY+ LI  + +   + +A  +L++M+  G SP  
Sbjct: 605 SREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSSGFSPTS 664

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINN-LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +T+  ++  +C QG+  D +L I+  +++ G+  +   YNTL+  L   G       +L+
Sbjct: 665 LTHRRVLQ-ACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKAMVVLE 723

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M+    +P   T+N LI G  K G +D A ++++QM+     P++ T+NT+LG L   G
Sbjct: 724 EMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLESAG 783

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            + E+  +L+ +      P  +TY+ L+ G  K+    +A+ LY +M+  G  P   T+ 
Sbjct: 784 RIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVSTYN 843

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            LI  F +   + +A +L  E+  RG    +  Y +++ G  K +      + L+ M   
Sbjct: 844 ALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMKEK 903

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            + P     S+I +  +  GM+ EA +L + L
Sbjct: 904 GFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 224/507 (44%), Gaps = 70/507 (13%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  GK+ +A  +       N  P+      LI  L +   ++ A +VL  M      P+
Sbjct: 359 LCKEGKIDEAKDMFRHALSDNHTPNGVTYTVLIDALCKAGNVDGAEQVLSEMEEKSISPN 418

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD------------ 234
            +T++ ++ GL KRG +  A   + EM   G +P+V+TY T++   F             
Sbjct: 419 VVTFSSIINGLVKRGWVGKATDYMREMKERGIDPNVVTYGTVIDGSFKCLGQEAALDVYH 478

Query: 235 -----------------------NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
                                  NGK ++A   +++   +G     + YT LI+ + K  
Sbjct: 479 EMLCEGVEVNKFIVDSLVNGLKKNGKIEKAEALFREMNERGVLLDHVNYTTLIDGLFKTG 538

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            +  A +V  ++  +   PD V YN  +N  C  GK  +A   +  + S G++P+ +TYN
Sbjct: 539 NLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFLEEMQSTGLKPDQVTYN 598

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           T++ +    G      K+L+ M  +S  P + TY+ LI GL + G V++A    N+M S 
Sbjct: 599 TMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEAGAVEKAKYLLNEMSSS 658

Query: 392 NCQP-----------------------------------DIVTYNTVLGALCKEGMLNEA 416
              P                                   DI  YNT++  LC  GM  +A
Sbjct: 659 GFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVYNTLVRVLCYNGMTRKA 718

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           + +L  ++G   +P  IT+N LI G  K G ++ A   Y QM+ +GISP+  T  TL+ G
Sbjct: 719 MVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGG 778

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
              A ++ E+  +L E+ KRG +  N  Y +++ G  K      A+++   M+   + P 
Sbjct: 779 LESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPK 838

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKL 563
            + ++ ++   +  GM  +A +L+ ++
Sbjct: 839 VSTYNALISDFSKVGMMSQAKELFNEM 865



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 108/415 (26%), Positives = 181/415 (43%), Gaps = 35/415 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D      ++      G L  A K+   +  +N +PD       I  L  + + ++A   L
Sbjct: 523 DHVNYTTLIDGLFKTGNLPAAFKVGQELTEKNLLPDAVVYNVFINCLCMLGKSKEAESFL 582

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +G  PD +TYN M+    + G+   A+ LL+ M  S  +P++ITY+T++  +F+ 
Sbjct: 583 EEMQSTGLKPDQVTYNTMIAAQSREGKTAKALKLLNGMKRSSIKPNLITYSTLIVGLFEA 642

Query: 236 GKFKQAIGFWKDQLRKGCPPYLIT-----------------------------------Y 260
           G  ++A     +    G  P  +T                                   Y
Sbjct: 643 GAVEKAKYLLNEMSSSGFSPTSLTHRRVLQACSQGRRSDLILEIHEWMMNAGLCADITVY 702

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
             L+  +C      +A+ VL++M+  G +PD +T+N+L+    K G  D+A    + +L 
Sbjct: 703 NTLVRVLCYNGMTRKAMVVLEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLY 762

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G+ PN  T+NTLL  L S G     D +L+ M +    P+  TY+IL+ G  K      
Sbjct: 763 HGISPNVATFNTLLGGLESAGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVE 822

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+  + +MV K   P + TYN ++    K GM+++A +L + +      P   TY+ L+ 
Sbjct: 823 AVRLYCEMVGKGFLPKVSTYNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVS 882

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           G +K     +       M E G SP   T  ++   F +     EA  LLK + K
Sbjct: 883 GWSKLRNGTEVRKFLKDMKEKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNLYK 937



 Score =  105 bits (262), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 140/276 (50%), Gaps = 5/276 (1%)

Query: 289 SPDIVTYNSLVN-FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           S D V+YN +++ FS + G   +A+L    +  RG+  +++T NT+L  L   G  D   
Sbjct: 100 SVDTVSYNVVMSGFSEQGGLAPEALLA--EMCKRGVPFDAVTVNTVLVGLCRDGRVDRAA 157

Query: 348 KILDIMNEASH--SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
            + ++M          V  +N L++G CK G ++ A     +M ++    D+V YN+++ 
Sbjct: 158 ALAEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVA 217

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            LC+ G ++ A  ++  +      P ++TY   I    ++  ++ A  LY +M+  G+ P
Sbjct: 218 GLCRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLP 277

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +T   L+ G C+  +  EA  L +E+ K G    +  Y ++I  L K+++ + ++ +L
Sbjct: 278 DVVTLSALVGGLCKDGRFSEAYALFREMEKIGAAPNHVTYCMLIDTLAKAQRGNESLSLL 337

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             ++S     D  +++ ++  +  +G  +EA  +++
Sbjct: 338 GEVVSRGVVMDLIMYTALMDWLCKEGKIDEAKDMFR 373



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 59/214 (27%), Positives = 86/214 (40%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L    G  +  D  T N ++      G L +A    D M      P+      L+ GL  
Sbjct: 722 LEEMSGRGIAPDTITFNALILGHFKSGHLDNAFSTYDQMLYHGISPNVATFNTLLGGLES 781

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             RI ++  VL  M   G  P  +TY+++V G  K+     A+ L  EM   G  P V T
Sbjct: 782 AGRIGESDMVLNEMKKRGIEPSNLTYDILVTGYGKQSNKVEAVRLYCEMVGKGFLPKVST 841

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN ++      G   QA   + +   +G  P   TY IL+    K        + L DM 
Sbjct: 842 YNALISDFSKVGMMSQAKELFNEMQNRGVLPTSCTYDILVSGWSKLRNGTEVRKFLKDMK 901

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
            +G SP   T +S+     K G   +A  ++ NL
Sbjct: 902 EKGFSPSKGTLSSISRAFSKPGMSWEARRLLKNL 935



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/185 (23%), Positives = 88/185 (47%), Gaps = 5/185 (2%)

Query: 396 DIVTYNTVLGALCKEGMLN-EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           D V+YN V+    ++G L  EAL       G       +T NT++ GL + G +++A  L
Sbjct: 102 DTVSYNVVMSGFSEQGGLAPEALLAEMCKRGVPFDA--VTVNTVLVGLCRDGRVDRAAAL 159

Query: 455 YGQMMENGI--SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
              M+  G     D +   +L+ G+C+   +E A  + + +  +G  +    Y  ++ GL
Sbjct: 160 AEVMVRGGGIGGLDVVGWNSLVDGYCKVGDMETAFAVAERMKAQGVGVDVVGYNSLVAGL 219

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
           C++ +VD A  +++ M     +P+   ++  + +       ++A+ L+++++   V    
Sbjct: 220 CRAGEVDAARDMVDTMKRDGVEPNVVTYTMFIVEYCRRNAVDDAFSLYEEMVRKGVLPDV 279

Query: 573 TTLLA 577
            TL A
Sbjct: 280 VTLSA 284


>gi|242095336|ref|XP_002438158.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
 gi|241916381|gb|EER89525.1| hypothetical protein SORBIDRAFT_10g008940 [Sorghum bicolor]
          Length = 607

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 230/453 (50%), Gaps = 8/453 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +K+L  F S      AS L D +A     PD     +L+  L R   +   +++   M  
Sbjct: 102 SKLLARFSSPADA--ASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMRE 159

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE--PDVITYNTILRTMFDNGKF 238
           +   PD +TY +++  LCK G +  A+ +LD MS  G +   D++  NT++  +   G+ 
Sbjct: 160 ASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRL 219

Query: 239 KQAIGFWKDQLRK--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           + AI F  +++R+  GC P  +TY  L +  C+   I  A ++++ M  EG +P+++T N
Sbjct: 220 QDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMN 279

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEP--NSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           ++V   C+ G+   A+       +  +E   N++TY+TL+ +           ++   M 
Sbjct: 280 TIVGGLCRVGRVGAALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMA 339

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +  + P    Y  +I+GL + G +  A N    M     + D   YN ++G  C++  L+
Sbjct: 340 DQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLH 399

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA QL   + G+   P + TYNTL+  L K G       L G M+++G  P  +T  TL+
Sbjct: 400 EAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLV 459

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C+A + +EA+ + + +G+   +     Y  +I  LCKS++VD+AI++ + M  +   
Sbjct: 460 HGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSREVDVAIKLFDEMRENNVP 519

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
            + T ++ ++K + D  M E+A++L  ++ E +
Sbjct: 520 ANVTTYNALLKGLQDKNMPEKAFELMDQMKEER 552



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 110/379 (29%), Positives = 178/379 (46%), Gaps = 15/379 (3%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-------LI 159
           SS G  V  D    N ++   C  G+L DA   +D   R  Q+   H C         L 
Sbjct: 193 SSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVD--ERMRQV---HGCAPNTVTYNCLA 247

Query: 160 RGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE 219
               R+  I+ A ++++ M   G  P+ IT N +VGGLC+ G++ +A+    E   +  E
Sbjct: 248 DACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGAALDFFREKRTTWLE 307

Query: 220 P--DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              + +TY+T++           A+  + +   +G PP  + Y  +I  + +   +  A 
Sbjct: 308 ARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDAC 367

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +   M   G   D   YN L+   C++ +  +A  +   +   G++P+  TYNTLL  L
Sbjct: 368 NIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCL 427

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G + AVD++L  M +    P+V T+  L++G CK G  D A+  F  M     QP+ 
Sbjct: 428 CKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNT 487

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V YNT++  LCK   ++ A++L   +  ++    + TYN L+ GL  K   EKA  L  Q
Sbjct: 488 VIYNTLIDFLCKSREVDVAIKLFDEMRENNVPANVTTYNALLKGLQDKNMPEKAFELMDQ 547

Query: 458 MMENGISPDDITHRTLI-W 475
           M E   +PD +T   L+ W
Sbjct: 548 MKEERCTPDYVTMDVLMEW 566



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/370 (27%), Positives = 180/370 (48%), Gaps = 6/370 (1%)

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           +A  L D ++     PDV T+N++L  +   G  +     +         P ++TY IL+
Sbjct: 114 AASFLRDSLAAGAPAPDVSTFNSLLSALGRAGNLRGMTELFTSMREASVKPDIVTYGILL 173

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCS--PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR- 321
            ++CK   +  A++VLD M+  G     DIV  N++V+  CK G+  DA++ ++  + + 
Sbjct: 174 NRLCKAGLVGDALKVLDRMSSPGSDVCADIVILNTVVDGLCKIGRLQDAIVFVDERMRQV 233

Query: 322 -GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G  PN++TYN L  +    G  D   +I++ M +   +P V T N ++ GLC+ G V  
Sbjct: 234 HGCAPNTVTYNCLADACCRVGDIDMACQIVERMEKEGVTPNVITMNTIVGGLCRVGRVGA 293

Query: 381 AINSFNQMVSK--NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           A++ F +  +     + + VTY+T++ A      +  A++L H +      P  + Y T+
Sbjct: 294 ALDFFREKRTTWLEARGNAVTYSTLVSAFLHCNNVALAMELFHEMADQGYPPDAVMYFTM 353

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I GL + G +  A  +   M + G   D   +  LI GFCR  ++ EA  L +E+   G 
Sbjct: 354 ISGLTQAGRLVDACNIAASMKKAGFKLDRKAYNILIGGFCRKKRLHEAHQLFEEMKGAGL 413

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +     Y  ++  LCK+       ++L  MI    +P    F T+V      G T+EA K
Sbjct: 414 QPDVYTYNTLLSCLCKAGDFSAVDELLGNMIDDGCQPSVVTFGTLVHGYCKAGKTDEALK 473

Query: 559 LWQKLIEWKV 568
           +++ + E ++
Sbjct: 474 IFRSMGEARI 483



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 200/443 (45%), Gaps = 16/443 (3%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG-VPDTITYNMMVGGLCKRG 201
           +A R+ IP     + L + L R      A+  L+  + +G   PD  T+N ++  L + G
Sbjct: 87  LAARHCIPPPSASL-LSKLLARFSSPADAASFLRDSLAAGAPAPDVSTFNSLLSALGRAG 145

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG---CPPYLI 258
            +R    L   M  +  +PD++TY  +L  +   G    A+         G   C   +I
Sbjct: 146 NLRGMTELFTSMREASVKPDIVTYGILLNRLCKAGLVGDALKVLDRMSSPGSDVCADIVI 205

Query: 259 TYTILIEQVCKQCGIARAIEVLDDM--AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
             T+ ++ +CK   +  AI  +D+    + GC+P+ VTYN L +  C+ G  D A  ++ 
Sbjct: 206 LNTV-VDGLCKIGRLQDAIVFVDERMRQVHGCAPNTVTYNCLADACCRVGDIDMACQIVE 264

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS-----PTVFTYNILING 371
            +   G+ PN IT NT++  L   G    V   LD   E   +         TY+ L++ 
Sbjct: 265 RMEKEGVTPNVITMNTIVGGLCRVG---RVGAALDFFREKRTTWLEARGNAVTYSTLVSA 321

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
                 V  A+  F++M  +   PD V Y T++  L + G L +A  +   +  +     
Sbjct: 322 FLHCNNVALAMELFHEMADQGYPPDAVMYFTMISGLTQAGRLVDACNIAASMKKAGFKLD 381

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
              YN LI G  +K  + +A  L+ +M   G+ PD  T+ TL+   C+A       +LL 
Sbjct: 382 RKAYNILIGGFCRKKRLHEAHQLFEEMKGAGLQPDVYTYNTLLSCLCKAGDFSAVDELLG 441

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            +   G +     +  ++HG CK+ K D A+++   M  +R +P+  +++T++  +    
Sbjct: 442 NMIDDGCQPSVVTFGTLVHGYCKAGKTDEALKIFRSMGEARIQPNTVIYNTLIDFLCKSR 501

Query: 552 MTEEAYKLWQKLIEWKVFEKGTT 574
             + A KL+ ++ E  V    TT
Sbjct: 502 EVDVAIKLFDEMRENNVPANVTT 524


>gi|413922209|gb|AFW62141.1| hypothetical protein ZEAMMB73_911481 [Zea mays]
          Length = 700

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 225/453 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N ++      GK +DA K+ D M      P+      +I G ++   +E   ++ 
Sbjct: 193 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLR 252

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+ +TYN+++ GLC+ G++    AL+DEM+     PD  TY+ +   +   
Sbjct: 253 DQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRT 312

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ +  +  + + L+KG      T +IL+  +CK   +A+A +V + +   G  P  V Y
Sbjct: 313 GESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIY 372

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  C+      A  +   + SR + P+ ITYN L++ L         + ++  M +
Sbjct: 373 NTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEK 432

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P+V T+N LI+     G +++     + M  K  + D++++ +V+ A CK G + E
Sbjct: 433 SGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPE 492

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ +L  +     +P    YN++ID   + G  E+A++L  +M  +G+S   +T+  L+ 
Sbjct: 493 AVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLK 552

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G CR+ Q++EA +L+  +  +G +    +Y  +I   C     D A+++L+ M     +P
Sbjct: 553 GLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRP 612

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
                 T+V  +A  G   +   L+Q+++   V
Sbjct: 613 TLRTCHTLVSALASAGRVHDMECLYQQMLHKNV 645



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 122/485 (25%), Positives = 225/485 (46%), Gaps = 37/485 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L++    G+  D      ++      PD      +++  +    ++ A  +L+ M  
Sbjct: 126 NLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAMLRRMGR 185

Query: 181 SGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           S G P  D  +YN+++ GL + G+   A+ + DEM   G  P+ ITYNT++      G  
Sbjct: 186 SEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDL 245

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           +         L  G  P ++TY +L+  +C+   +     ++D+MA     PD  TY+ L
Sbjct: 246 EAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSIL 305

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            +   + G+    + +    L +G+   + T + LL+ L   G      ++ +++     
Sbjct: 306 FDGLTRTGESQTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGL 365

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            PT   YN LING C+   +  A   F QM S++ +PD +TYN ++  LCK  M+ +A  
Sbjct: 366 VPTTVIYNTLINGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAED 425

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +  S   P + T+NTLID     G +EK   +   M + GI  D I+  +++  FC
Sbjct: 426 LVMEMEKSGVDPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFC 485

Query: 479 RADQVEEAVDLL-----KEIGKRGN-----------------------KMRNSA------ 504
           +  ++ EAV +L     K++                            KM+NS       
Sbjct: 486 KNGKIPEAVAILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIV 545

Query: 505 -YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y L++ GLC+S ++D A +++  + +   +PD   ++TI+    + G T++A +L Q++
Sbjct: 546 TYNLLLKGLCRSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEM 605

Query: 564 IEWKV 568
            ++ +
Sbjct: 606 NKYGI 610



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 107/424 (25%), Positives = 203/424 (47%), Gaps = 37/424 (8%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD----------------- 151
           DGP  + +  T N +L   C  G++ +   L+D MA  + +PD                 
Sbjct: 258 DGP--KPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGES 315

Query: 152 ------------------FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMM 193
                              + C  L+ GL +  ++ KA +V +++V +G VP T+ YN +
Sbjct: 316 QTMLSLFAESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTL 375

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
           + G C+   +R A  + ++M      PD ITYN ++  +       +A     +  + G 
Sbjct: 376 INGYCQVRDLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGV 435

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
            P + T+  LI+       + +   VL DM  +G   D++++ S+V   CK GK  +AV 
Sbjct: 436 DPSVETFNTLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVA 495

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           ++++++ + + PN+  YN+++ +    G  +    +++ M  +  S ++ TYN+L+ GLC
Sbjct: 496 ILDDMIYKDVAPNAQVYNSIIDAYIESGDTEQALLLVEKMKNSGVSASIVTYNLLLKGLC 555

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           +   +D A      + ++  +PD+V+YNT++ A C +G  ++AL+LL  +N     P L 
Sbjct: 556 RSSQIDEAEELIYTLRNQGLRPDVVSYNTIISACCNKGDTDKALELLQEMNKYGIRPTLR 615

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           T +TL+  LA  G +     LY QM+   + P    +  ++  + R +   +   L KE+
Sbjct: 616 TCHTLVSALASAGRVHDMECLYQQMLHKNVEPSSSIYGIMVDAYVRCENDSKVASLKKEM 675

Query: 494 GKRG 497
            ++G
Sbjct: 676 SEKG 679



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 116/452 (25%), Positives = 198/452 (43%), Gaps = 72/452 (15%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +P    C  L+  L+ + R         ++V +G  PDT  +N +V      G +  A+A
Sbjct: 119 LPSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALA 178

Query: 209 LLDEM--SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           +L  M  S     PD  +YN ++             G W+    KG              
Sbjct: 179 MLRRMGRSEGAPPPDAFSYNVVI------------AGLWRSG--KG-------------- 210

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
                  + A++V D+M   G +P+ +TYN++++   K G  +    + + +L  G +PN
Sbjct: 211 -------SDALKVFDEMVDMGVAPNRITYNTMIDGHVKGGDLEAGFRLRDQMLHDGPKPN 263

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
            +TYN LL  L   G  D    ++D M   S  P  FTY+IL +GL + G     ++ F 
Sbjct: 264 VVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDGFTYSILFDGLTRTGESQTMLSLFA 323

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           + + K       T + +L  LCK+G + +A Q+  +L  +   P  + YNTLI+G  +  
Sbjct: 324 ESLKKGVMLGAYTCSILLNGLCKDGKVAKAKQVFEMLVHTGLVPTTVIYNTLINGYCQVR 383

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG--------N 498
            +  A  ++ QM    I PD IT+  LI G C+ + V +A DL+ E+ K G        N
Sbjct: 384 DLRGAFCIFEQMKSRHIRPDHITYNALINGLCKLEMVTKAEDLVMEMEKSGVDPSVETFN 443

Query: 499 KMRNS---------------------------AYRLVIHGLCKSKKVDMAIQVLELMISS 531
            + ++                           ++  V+   CK+ K+  A+ +L+ MI  
Sbjct: 444 TLIDAYGTAGQLEKCFTVLSDMQQKGIKSDVISFGSVVKAFCKNGKIPEAVAILDDMIYK 503

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              P+  V+++I+    + G TE+A  L +K+
Sbjct: 504 DVAPNAQVYNSIIDAYIESGDTEQALLLVEKM 535



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 51/212 (24%), Positives = 103/212 (48%), Gaps = 2/212 (0%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P++ + N+L+  L   G       +F  +V+   +PD   +N V+ A    G L+ AL +
Sbjct: 120 PSLSSCNLLLESLLFVGRHADVRAAFGLLVAAGARPDTFAWNKVVQACVAAGDLDVALAM 179

Query: 420 LHLLNGSSCSPC--LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           L  +  S  +P     +YN +I GL + G    A+ ++ +M++ G++P+ IT+ T+I G 
Sbjct: 180 LRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDMGVAPNRITYNTMIDGH 239

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +   +E    L  ++   G K     Y +++ GLC++ ++D    +++ M S    PD 
Sbjct: 240 VKGGDLEAGFRLRDQMLHDGPKPNVVTYNVLLSGLCRTGRMDETRALMDEMASHSMLPDG 299

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             +S +   +   G ++    L+ + ++  V 
Sbjct: 300 FTYSILFDGLTRTGESQTMLSLFAESLKKGVM 331


>gi|4455203|emb|CAB36526.1| putative protein [Arabidopsis thaliana]
 gi|7269532|emb|CAB79535.1| putative protein [Arabidopsis thaliana]
          Length = 439

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 116/381 (30%), Positives = 204/381 (53%), Gaps = 3/381 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           PD  T N++V   C+  Q  SA++ L +M   G EPD++T ++++     +   K A+  
Sbjct: 46  PDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYV 105

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
                + G    ++  TILI+ +CK   +  A+EVL  M   G SP++VTY+SL+   CK
Sbjct: 106 AGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCK 165

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            G+  DA   ++ + S+ + PN IT++ L+ +   RG    VD +  +M + S  P VFT
Sbjct: 166 SGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFT 225

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y+ LI GLC +  VD AI   + M+SK C P++VTY+T+     K   +++ ++LL  + 
Sbjct: 226 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 285

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
               +   ++ NTLI G  + G ++ A+ ++G M  NG+ P+  ++  ++ G     +VE
Sbjct: 286 QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVE 345

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +A+   + + K  N +    Y ++IHG+CK+  V  A  +   +   R +PD   ++ ++
Sbjct: 346 KALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 405

Query: 545 KKVADDGMTEEA---YKLWQK 562
            ++   GM  EA    + +QK
Sbjct: 406 AELNRAGMRTEADALNRFYQK 426



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/339 (28%), Positives = 164/339 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T + ++  FC    + DA  +   M +     D      LI  L +   +  A 
Sbjct: 79  IEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPAL 138

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +VL+ M   G  P+ +TY+ ++ GLCK G++  A   L EM      P+VIT++ ++   
Sbjct: 139 EVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAY 198

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK  +    +K  ++    P + TY+ LI  +C    +  AI++LD M  +GC+P++
Sbjct: 199 AKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNV 258

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY++L N   K  + DD + +++++  RG+  N+++ NTL+      G  D    +   
Sbjct: 259 VTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGY 318

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P + +YNI++ GL   G V++A++ F  M       DI+TY  ++  +CK  M
Sbjct: 319 MTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACM 378

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
           + EA  L + L      P    Y  +I  L + G   +A
Sbjct: 379 VKEAYDLFYKLKFKRVEPDFKAYTIMIAELNRAGMRTEA 417



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 99/366 (27%), Positives = 178/366 (48%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD + C  L+    R  +   A   L  M+  G  PD +T + +V G C    I+ A+ +
Sbjct: 46  PDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYV 105

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
             +M   G + DV+    ++ T+  N     A+   K    +G  P ++TY+ LI  +CK
Sbjct: 106 AGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCK 165

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +A A   L +M  +  +P+++T+++L++   K+GK      V   ++   ++PN  T
Sbjct: 166 SGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFT 225

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y++L++ L      D   K+LD+M     +P V TY+ L NG  K   VD  I   + M 
Sbjct: 226 YSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMP 285

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +    + V+ NT++    + G ++ AL +   +  +   P + +YN ++ GL   G +E
Sbjct: 286 QRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVE 345

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           KA+  +  M +     D IT+  +I G C+A  V+EA DL  ++  +  +    AY ++I
Sbjct: 346 KALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMI 405

Query: 510 HGLCKS 515
             L ++
Sbjct: 406 AELNRA 411



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 196/406 (48%), Gaps = 6/406 (1%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCE--PDVITYNTILRTMFD 234
           M  S  +P  + +N ++  + K       I L   + +  G E  PD+ T N ++     
Sbjct: 1   MAYSYPLPSIVEFNKVLTAIAKMQMYDVVINLWKRIENAEGIEISPDLYTCNILVNCFCR 60

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             +   A+ +    ++ G  P ++T + L+   C    I  A+ V   M   G   D+V 
Sbjct: 61  CFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCLSNSIKDAVYVAGQMEKMGIKRDVVV 120

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
              L++  CK      A+ V+  +  RG+ PN +TY++L+  L   G     ++ L  M+
Sbjct: 121 DTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVTYSSLITGLCKSGRLADAERRLHEMD 180

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               +P V T++ LI+   K G + +  + +  M+  +  P++ TY++++  LC    ++
Sbjct: 181 SKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMIQMSIDPNVFTYSSLIYGLCMHNRVD 240

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA+++L L+    C+P ++TY+TL +G  K   ++  + L   M + G++ + ++  TLI
Sbjct: 241 EAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVDDGIKLLDDMPQRGVAANTVSCNTLI 300

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+ +A +++ A+ +   +   G      +Y +V+ GL  + +V+ A+   E M  +R  
Sbjct: 301 KGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVLAGLFANGEVEKALSRFEHMQKTRND 360

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV---FEKGTTLLA 577
            D   ++ ++  +    M +EAY L+ KL   +V   F+  T ++A
Sbjct: 361 LDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVEPDFKAYTIMIA 406



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 184/400 (46%), Gaps = 1/400 (0%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           + +++G  +  D  T N ++  FC   + + A   +  M +    PD     +L+ G   
Sbjct: 36  IENAEGIEISPDLYTCNILVNCFCRCFQPSSALSYLGKMMKLGIEPDIVTASSLVNGFCL 95

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
            + I+ A  V   M   G   D +   +++  LCK   +  A+ +L  M   G  P+V+T
Sbjct: 96  SNSIKDAVYVAGQMEKMGIKRDVVVDTILIDTLCKNRLVVPALEVLKRMKDRGISPNVVT 155

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y++++  +  +G+   A     +   K   P +IT++ LI+   K+  +++   V   M 
Sbjct: 156 YSSLITGLCKSGRLADAERRLHEMDSKKINPNVITFSALIDAYAKRGKLSKVDSVYKMMI 215

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
                P++ TY+SL+   C   + D+A+ +++ ++S+G  PN +TY+TL +        D
Sbjct: 216 QMSIDPNVFTYSSLIYGLCMHNRVDEAIKMLDLMISKGCTPNVVTYSTLANGFFKSSRVD 275

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
              K+LD M +   +    + N LI G  + G +D A+  F  M S    P+I +YN VL
Sbjct: 276 DGIKLLDDMPQRGVAANTVSCNTLIKGYFQAGKIDLALGVFGYMTSNGLIPNIRSYNIVL 335

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             L   G + +AL     +  +     +ITY  +I G+ K   +++A  L+ ++    + 
Sbjct: 336 AGLFANGEVEKALSRFEHMQKTRNDLDIITYTIMIHGMCKACMVKEAYDLFYKLKFKRVE 395

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           PD   +  +I    RA    EA D L    ++  +   SA
Sbjct: 396 PDFKAYTIMIAELNRAGMRTEA-DALNRFYQKHVRQNESA 434


>gi|356557791|ref|XP_003547194.1| PREDICTED: pentatricopeptide repeat-containing protein At3g53700,
           chloroplastic-like [Glycine max]
          Length = 793

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 118/431 (27%), Positives = 213/431 (49%), Gaps = 3/431 (0%)

Query: 136 ASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           A +++ +M RR  + P   F   ++    R  ++  A +VL +M  +G  P     N  +
Sbjct: 219 ARRVLRLMTRRGIECPPEAFGYVMV-SYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTI 277

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
             L K G++  A+  L+ M V+G +PD++TYN++++   D  + + A+        KGCP
Sbjct: 278 YVLVKGGKLEKALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCP 337

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDAVL 313
           P  ++Y  ++  +CK+  I     +++ M       PD VTYN+L++   K G  DDA+ 
Sbjct: 338 PDKVSYYTVMGFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALA 397

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
            +     +G   + + Y+ ++HS   +G  D    ++  M     +P V TY  +++G C
Sbjct: 398 FLKEAQDKGFHIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFC 457

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           + G +D A     QM    C+P+ V+Y  +L  LC  G   EA +++++      +P  I
Sbjct: 458 RLGRIDEAKKILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAI 517

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TY  ++ GL ++G + +A  L  +M+E G  P  +    LI   C+  +V EA   L+E 
Sbjct: 518 TYGAVMHGLRREGKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEEC 577

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
             +G  +    +  VIHG C+   ++ A+ VL+ M  S   PD   ++ +   +   G  
Sbjct: 578 LNKGCAINVVNFTTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRL 637

Query: 554 EEAYKLWQKLI 564
           +EA +L  K++
Sbjct: 638 DEAAELIVKML 648



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/448 (27%), Positives = 221/448 (49%), Gaps = 3/448 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N +++ +C   ++ DA +LI  +  +   PD      ++  L +  +IE+  
Sbjct: 301 IKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVK 360

Query: 173 KVLQIMVM-SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +++ MV  S  +PD +TYN ++  L K G    A+A L E    G   D + Y+ I+ +
Sbjct: 361 CLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHS 420

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G+  +A     D   +GC P ++TYT +++  C+   I  A ++L  M   GC P+
Sbjct: 421 FCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPN 480

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            V+Y +L+N  C  GK  +A  +IN        PN+ITY  ++H L   G       +  
Sbjct: 481 TVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTR 540

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M E    PT    N+LI  LC+   V  A     + ++K C  ++V + TV+   C+ G
Sbjct: 541 EMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIG 600

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +  AL +L  +  S   P  +TY  L D L KKG +++A  L  +M+  G+ P  +T+R
Sbjct: 601 DMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYR 660

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           ++I  + +  +V++ ++LL+++ KR  +   + Y  VI  LC    ++ A ++L  ++ +
Sbjct: 661 SVIHRYSQWGRVDDMLNLLEKMLKR--QPFRTVYNQVIEKLCDFGNLEEAEKLLGKVLRT 718

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             K D      +++     G+   AYK+
Sbjct: 719 ASKVDANTCHVLMESYLKKGVAISAYKV 746



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 225/478 (47%), Gaps = 38/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ ++   GKL +A +++ +M +    P    C   I  L++  ++EKA K L+ M ++G
Sbjct: 241 VMVSYSRAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLEKALKFLERMQVTG 300

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TYN ++ G C   +I  A+ L+  +   GC PD ++Y T++  +    K ++  
Sbjct: 301 IKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVMGFLCKEKKIEEVK 360

Query: 243 GFWKDQL-RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +  +      P  +TY  LI  + K      A+  L +   +G   D V Y+++V+ 
Sbjct: 361 CLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGFHIDKVGYSAIVHS 420

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C++G+ D+A  ++ ++ SRG  P+ +TY  ++      G  D   KIL  M +    P 
Sbjct: 421 FCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKILQQMYKHGCKPN 480

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL-- 419
             +Y  L+NGLC  G    A    N        P+ +TY  V+  L +EG L+EA  L  
Sbjct: 481 TVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRREGKLSEACDLTR 540

Query: 420 -------------LHLLNGSSC------------SPCL--------ITYNTLIDGLAKKG 446
                        ++LL  S C              CL        + + T+I G  + G
Sbjct: 541 EMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNFTTVIHGFCQIG 600

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            ME A+ +   M  +G  PD +T+  L     +  +++EA +L+ ++  +G       YR
Sbjct: 601 DMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLSKGLDPTPVTYR 660

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            VIH   +  +VD  + +LE M+  + +P  TV++ +++K+ D G  EEA KL  K++
Sbjct: 661 SVIHRYSQWGRVDDMLNLLEKML--KRQPFRTVYNQVIEKLCDFGNLEEAEKLLGKVL 716



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 94/376 (25%), Positives = 166/376 (44%), Gaps = 74/376 (19%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+   + I+ +FC +G++ +A  L+  M  R   PD      ++ G  R+ RI++A K+L
Sbjct: 410 DKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKKIL 469

Query: 176 QIMVMSGGVPDTITYNMMVGGLC-----------------------------------KR 200
           Q M   G  P+T++Y  ++ GLC                                   + 
Sbjct: 470 QQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLRRE 529

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G++  A  L  EM   G  P  +  N +++++  N K  +A  + ++ L KGC   ++ +
Sbjct: 530 GKLSEACDLTREMVEKGFFPTPVEINLLIQSLCQNQKVVEAKKYLEECLNKGCAINVVNF 589

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           T +I   C+   +  A+ VLDDM + G  PD VTY +L +   K+G+ D+A  +I  +LS
Sbjct: 590 TTVIHGFCQIGDMEAALSVLDDMYLSGKHPDAVTYTALFDALGKKGRLDEAAELIVKMLS 649

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA-SHSPTVFTYNILINGLCKYGLVD 379
           +G++P  +TY +++H       W  VD +L+++ +     P    YN +I  LC +G ++
Sbjct: 650 KGLDPTPVTYRSVIHRYSQ---WGRVDDMLNLLEKMLKRQPFRTVYNQVIEKLCDFGNLE 706

Query: 380 RA--------------------------------INSFN---QMVSKNCQPDIVTYNTVL 404
            A                                I+++    +M  +N  PD+     V 
Sbjct: 707 EAEKLLGKVLRTASKVDANTCHVLMESYLKKGVAISAYKVACRMFRRNLTPDLKLCEKVS 766

Query: 405 GALCKEGMLNEALQLL 420
             L  +G L EA  L+
Sbjct: 767 KKLVLDGKLVEADNLM 782



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 177/381 (46%), Gaps = 42/381 (11%)

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL-IEQVCKQC-GIARAIEVLDDMA 284
            +LR+  D  +      +W D+  +     ++ YT+L +    K C G  R + ++    
Sbjct: 172 AVLRSQADE-RVALNFFYWADRQWRYSHHPVVYYTMLDVLSKTKLCQGARRVLRLMTRRG 230

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
           IE C P+   Y  +V++S + GK  +A+ V+  +   G+EP+    NT ++ L   G  +
Sbjct: 231 IE-CPPEAFGY-VMVSYS-RAGKLRNALRVLTLMQKAGVEPSLSICNTTIYVLVKGGKLE 287

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
              K L+ M      P + TYN LI G C    ++ A+     + SK C PD V+Y TV+
Sbjct: 288 KALKFLERMQVTGIKPDIVTYNSLIKGYCDLNRIEDALELIAGLPSKGCPPDKVSYYTVM 347

Query: 405 GALCKEGMLNEALQLLH-LLNGSSCSPCLITYNTLIDGLAK------------------- 444
           G LCKE  + E   L+  ++  S+  P  +TYNTLI  L+K                   
Sbjct: 348 GFLCKEKKIEEVKCLMEKMVWNSNLIPDQVTYNTLIHMLSKHGHADDALAFLKEAQDKGF 407

Query: 445 ----------------KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
                           KG M++A  L   M   G +PD +T+  ++ GFCR  +++EA  
Sbjct: 408 HIDKVGYSAIVHSFCQKGRMDEAKSLVIDMYSRGCNPDVVTYTAIVDGFCRLGRIDEAKK 467

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           +L+++ K G K    +Y  +++GLC S K   A +++ +     + P+   +  ++  + 
Sbjct: 468 ILQQMYKHGCKPNTVSYTALLNGLCHSGKSLEAREMINVSEEHWWTPNAITYGAVMHGLR 527

Query: 549 DDGMTEEAYKLWQKLIEWKVF 569
            +G   EA  L ++++E   F
Sbjct: 528 REGKLSEACDLTREMVEKGFF 548


>gi|215768057|dbj|BAH00286.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 506

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 125/449 (27%), Positives = 217/449 (48%), Gaps = 2/449 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMV 179
           N ++      G+  DA ++ D M  R  +P+ H   N +I G I+   +E   ++   MV
Sbjct: 19  NVVIAGMWRAGRGGDAVEVFDEMTERAVLPN-HITYNTMIDGHIKGGDLEAGFRLRDQMV 77

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  P+ ITYN+++ GLC+ G++    ALLDEM+     PD  TY+ +   +  NG  K
Sbjct: 78  CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 137

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
             +  +   L+ G      T +IL+  +CK   ++ A EVL  +   G  P  V YN+L+
Sbjct: 138 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 197

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  C+ G+ + A      + SR ++P+ ITYN L++ L           +L  M +   +
Sbjct: 198 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 257

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           PTV T+N LI+   + G +++     ++M     +P++V+Y +++ A CK G + EA+ +
Sbjct: 258 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 317

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +      P    YN +ID   + G  ++A +L  +M  NGISP  +T+  LI G C 
Sbjct: 318 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCN 377

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             Q+ EA +++  +          +Y  +I   C    +D A+ + + M     K     
Sbjct: 378 QSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRT 437

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +  ++  +   G   E   L+QK+++  V
Sbjct: 438 YHQLISGLGGAGRLNEMEYLYQKMMQNNV 466



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 196/415 (47%), Gaps = 35/415 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHF----------------------- 154
           T N +L   C  G++ + S L+D MA +  +PD F +                       
Sbjct: 87  TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 146

Query: 155 -----------CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
                      C  L+ GL +  ++  A +VLQ +V +G VP  + YN ++ G C+ G++
Sbjct: 147 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 206

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A +   +M     +PD ITYN ++  +    +   A     +    G  P + T+  L
Sbjct: 207 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 266

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+   +   + +   VL +M   G  P++V+Y S+VN  CK GK  +AV +++++  + +
Sbjct: 267 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 326

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN+  YN ++ +    G  D    +++ M     SP++ TYN+LI GLC    +  A  
Sbjct: 327 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 386

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
             N + +    PD V+YNT++ A C  G +++AL L   ++       + TY+ LI GL 
Sbjct: 387 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 446

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
             G + +   LY +MM+N + P +  H  ++  + +     +A DL KE+ ++ N
Sbjct: 447 GAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRN 501



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/419 (25%), Positives = 201/419 (47%), Gaps = 35/419 (8%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+  +YN+++ G+ + G+   A+ + DEM+     P+ ITYNT++      G  +     
Sbjct: 13  PNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRL 72

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
               +  G  P  ITY +L+  +C+   +     +LD+MA +   PD  TY+ L +   +
Sbjct: 73  RDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSR 132

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            G     + +    L  G+     T + LL+ L   G     +++L  +  A   PT   
Sbjct: 133 NGDSKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVI 192

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN LING C+ G ++ A ++F QM S++ +PD +TYN ++  LCK   +  A  LL  + 
Sbjct: 193 YNTLINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQ 252

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
            +  +P + T+NTLID   + G +EK  ++  +M ENG+ P+ +++ +++  FC+  ++ 
Sbjct: 253 DNGVNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIP 312

Query: 485 EAVDLLKEIGKRG----------------------------NKMRNSA-------YRLVI 509
           EAV +L ++  +                              KM+++        Y L+I
Sbjct: 313 EAVAILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLI 372

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            GLC   ++  A +++  + + R  PD   ++T++      G  ++A  L Q++ ++ +
Sbjct: 373 KGLCNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 431



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 137/284 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++   C   ++T+A  L+  M      P       LI    R  ++EK  
Sbjct: 221 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 280

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL  M  +G  P+ ++Y  +V   CK G+I  A+A+LD+M      P+   YN I+   
Sbjct: 281 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 340

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            ++G   QA    +     G  P ++TY +LI+ +C Q  I+ A E+++ ++     PD 
Sbjct: 341 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 400

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V+YN+L++  C +G  D A+ +   +   G++    TY+ L+  LG  G  + ++ +   
Sbjct: 401 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 460

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           M + +  P+   +NI++    KYG   +A +   +M+ K    D
Sbjct: 461 MMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 504


>gi|297740763|emb|CBI30945.3| unnamed protein product [Vitis vinifera]
          Length = 796

 Score =  201 bits (510), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 121/478 (25%), Positives = 236/478 (49%), Gaps = 38/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ ++   GKL +A +++ +M +    PD   C   I  L+  +R++KA + L+ M +  
Sbjct: 238 VMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVE 297

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI------------------- 223
             P+ ITYN ++ G C   ++  A+ L+ EM   GC PD I                   
Sbjct: 298 IEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVR 357

Query: 224 -----------------TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
                            TYNT +  +  +G   +A+ F ++   +      + Y+ ++  
Sbjct: 358 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHS 417

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
            C++  + +A E++++M  +GC PD+VTY S++N  C++ K D A  ++  +   G +PN
Sbjct: 418 FCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 477

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           +++Y  LL+ L   G      +++++  E    P   TY++L++G  + G    A +   
Sbjct: 478 TVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVR 537

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M+ K   P  V  N ++ +LC+E  ++EA + +     + C+  ++ + T+I G  +K 
Sbjct: 538 EMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKD 597

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +E A+ L   M  +   PD +T+ T+I    +  ++EEA  L  ++ + G       YR
Sbjct: 598 DLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYR 657

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            VIH  C+  +V+  +++LE M+S   +   T ++ +++K+   G  E+AYKL  K++
Sbjct: 658 TVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKLLGKVL 713



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 222/446 (49%), Gaps = 3/446 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T N +++ +C   +L DA +LI  M  +   PD      ++  L +  RI++  
Sbjct: 298 IEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVR 357

Query: 173 KVLQIMVM-SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +++ M+  S  +PD +TYN  V  L K G    A+  L E        D + Y+ I+ +
Sbjct: 358 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHS 417

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G+  +A     +   KGC P ++TYT +I  +C++  + +A ++L  M   GC P+
Sbjct: 418 FCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 477

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            V+Y +L+N  CK G   +A  ++N        PN+ITY+ L+H     G       ++ 
Sbjct: 478 TVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVR 537

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M +    PT    N+LI  LC+   VD A     Q ++  C  ++V + TV+   C++ 
Sbjct: 538 EMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKD 597

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L  AL LL  +  S+  P ++TY T+ID L KKG +E+A  L  +M+  G+ P  +T+R
Sbjct: 598 DLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYR 657

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           T+I  +CR  +VE+ + LL+++  R      +AY  VI  LC    ++ A ++L  ++ +
Sbjct: 658 TVIHQYCRMGRVEDLLKLLEKMLSRQEC--RTAYNQVIEKLCSFGNLEQAYKLLGKVLRT 715

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAY 557
             K D      +++     G+   +Y
Sbjct: 716 ASKIDANTCHMLIESYLSKGIPLMSY 741



 Score =  119 bits (297), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 84/316 (26%), Positives = 148/316 (46%), Gaps = 38/316 (12%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P+   Y  +V++S + GK  +A+ V+  +   G+EP+    NT +H L      D   + 
Sbjct: 232 PEAFGY-VMVSYS-RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRF 289

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L+ M      P V TYN LI G C    ++ A+    +M  K C PD ++Y TV+G LCK
Sbjct: 290 LERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCK 349

Query: 410 EGMLNEALQLLH-LLNGSSCSPCLITYNTLIDGLAK------------------------ 444
           E  + E   L+  +L  S+  P  +TYNT +  L+K                        
Sbjct: 350 EKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKV 409

Query: 445 -----------KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
                      +G M+KA  +  +M   G  PD +T+ ++I G C+  +V++A  +L+++
Sbjct: 410 GYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQM 469

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            K G K    +Y  +++GLCK+     A +++ +     + P+   +S ++     +G +
Sbjct: 470 YKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKS 529

Query: 554 EEAYKLWQKLIEWKVF 569
            EA  L +++I+   F
Sbjct: 530 SEACDLVREMIKKGFF 545


>gi|357499033|ref|XP_003619805.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494820|gb|AES76023.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 548

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 227/452 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E+D  T N ++  F   G  + +  +   + ++   P       LI+GL     I +A 
Sbjct: 92  IESDFFTFNILINCFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQAL 151

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                +V  G   D ++Y  ++ GLCK G+I +A+ LL  +     +P+ + YN I+  M
Sbjct: 152 HFHDKVVAQGFHLDQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNM 211

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                   A   +   + K   P + TY  LI        +  AI++ + M  E  +P++
Sbjct: 212 CKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNV 271

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+N LV+  CK+GK +DA +V+  ++   ++P+ +TYN+L+    S    +    I D 
Sbjct: 272 YTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDS 331

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M        V  Y  ++NG CK  +VD AIN F +M  +   P++VTY++++  LCK G 
Sbjct: 332 MASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGR 391

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +  AL+L+  ++     P ++TY++++D L K   ++KA+ L   + + GI PD  T+  
Sbjct: 392 IFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTI 451

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C++ ++E+A ++ +++  +G  +   AY ++I G C     D A+ +L  M  + 
Sbjct: 452 LIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNG 511

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+   +  ++  + +    + A KL +++I
Sbjct: 512 CIPNAKTYELVILSLFEKDENDTAEKLLREMI 543



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/359 (27%), Positives = 169/359 (47%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L   DG  V+ +    N I+ N C    + DA  L   M  +   PD      LI G   
Sbjct: 189 LKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLYSQMVAKRICPDVFTYNALISGFSA 248

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           + ++  A  +   M      P+  T+N++V G CK G++  A  +L  M     +PDV+T
Sbjct: 249 VSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKEGKVNDAKVVLAIMMKDDIKPDVVT 308

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN+++       K  +A   +      G    +  YT ++   CK   +  AI + ++M 
Sbjct: 309 YNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIYTTMVNGFCKIKMVDEAINLFEEMR 368

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
                P++VTY+SL++  CK G+   A+ +++ +  RG  PN +TY+++L +L      D
Sbjct: 369 CRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHDRGQPPNIVTYSSILDALCKNHHVD 428

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +L  + +    P ++TY ILI GLC+ G ++ A N F  ++ K    D+  Y  ++
Sbjct: 429 KAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLEDAQNVFEDLLVKGYNLDVYAYTVMI 488

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
              C +G  ++AL LL  +  + C P   TY  +I  L +K   + A  L  +M+  G+
Sbjct: 489 QGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVILSLFEKDENDTAEKLLREMIVRGL 547



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 179/382 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ +   ++   C  G++T A +L+  +  +   P+      +I  + +   +  A  + 
Sbjct: 165 DQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLY 224

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV     PD  TYN ++ G     ++  AI L ++M      P+V T+N ++      
Sbjct: 225 SQMVAKRICPDVFTYNALISGFSAVSKLNYAIDLFNKMKKENINPNVYTFNILVDGFCKE 284

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A       ++    P ++TY  L++  C    + +A ++ D MA  G   ++  Y
Sbjct: 285 GKVNDAKVVLAIMMKDDIKPDVVTYNSLMDGYCSINKVNKAKDIFDSMASGGVIANVQIY 344

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            ++VN  CK    D+A+ +   +  R + PN +TY++L+  L   G      K++D M++
Sbjct: 345 TTMVNGFCKIKMVDEAINLFEEMRCRKIIPNVVTYSSLIDGLCKLGRIFYALKLVDEMHD 404

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TY+ +++ LCK   VD+AI     +  +  +PD+ TY  ++  LC+ G L +
Sbjct: 405 RGQPPNIVTYSSILDALCKNHHVDKAIALLTNLKDQGIRPDMYTYTILIKGLCQSGRLED 464

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  +   L     +  +  Y  +I G   KG  +KA+ L  +M +NG  P+  T+  +I 
Sbjct: 465 AQNVFEDLLVKGYNLDVYAYTVMIQGFCDKGFFDKALALLSKMEDNGCIPNAKTYELVIL 524

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
                D+ + A  LL+E+  RG
Sbjct: 525 SLFEKDENDTAEKLLREMIVRG 546



 Score = 82.8 bits (203), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 43/188 (22%), Positives = 95/188 (50%), Gaps = 1/188 (0%)

Query: 382 INSFNQMV-SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           I+SFN ++  KN  P    +N +L +L K    + AL L   +  +       T+N LI+
Sbjct: 45  ISSFNHLLLHKNPTPPTFQFNKILSSLVKAKHHSTALSLHQQMELNGIESDFFTFNILIN 104

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
             ++ G    +  ++ ++++ G  P  IT  TLI G C    + +A+    ++  +G  +
Sbjct: 105 CFSQLGLNSLSFSIFAKILKKGYHPTAITFNTLIKGLCLKGHIHQALHFHDKVVAQGFHL 164

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              +Y  +I+GLCK  ++  A+Q+L+ +     +P+  +++ I+  +    +  +A+ L+
Sbjct: 165 DQVSYGTLINGLCKVGRITAALQLLKRVDGKLVQPNAVMYNMIIDNMCKAKLVNDAFDLY 224

Query: 561 QKLIEWKV 568
            +++  ++
Sbjct: 225 SQMVAKRI 232


>gi|225434476|ref|XP_002278184.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09060
           [Vitis vinifera]
          Length = 691

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 222/451 (49%), Gaps = 2/451 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T N +++  C + +   A +L++ M  +   PD      LI  L +   +  A K+   
Sbjct: 150 QTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 209

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNG 236
           M   G  PD   YN+++ G  K+G I +A  + + +       P++ +YN ++  +   G
Sbjct: 210 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCG 269

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           KF ++   W    +      L TY+ LI  +C    +  A  V  +MA  G SPD+V YN
Sbjct: 270 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 329

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +++N   + G+ ++ + +   +   G     ++YN L+  L      D    I +++ E 
Sbjct: 330 TMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEK 388

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
                  TY +L++GLCK G +++A++   +  +     D   Y++++  LC+EG L+E 
Sbjct: 389 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 448

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             +L  +    C P     N +I+G  +   +E A+  +G M+  G  P  +T+ TLI G
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             +A++  EA  L+KE+  +G K     Y L+++GLC+ KK+DMA+ +    +   +KPD
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPD 568

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
             + + I+  +   G  E+A +L+ ++ + K
Sbjct: 569 VKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/442 (26%), Positives = 211/442 (47%), Gaps = 1/442 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           GP V  +  + N ++   C  GK  ++ ++   M +  +  D +    LI GL     ++
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A++V + M  +G  PD + YN M+ G  + G+I   + L   M   GC   V++YN ++
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILI 366

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           R +F+N K  +AI  W+    K C    +TY +L+  +CK   + +A+ +L++       
Sbjct: 367 RGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGD 426

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            D   Y+S++N  C++G+ D+   V++ +   G +PN    N +++        +   + 
Sbjct: 427 LDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRF 486

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M      PTV TYN LINGL K      A     +M+ K  +P+++TY+ ++  LC+
Sbjct: 487 FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ 546

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              L+ AL L          P +  +N +I GL   G +E A+ LY +M +    P+ +T
Sbjct: 547 GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVT 606

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           H TL+ GF +    E A  +   I + G +    +Y + + GLC   ++  A+  L   +
Sbjct: 607 HNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFLNDAV 666

Query: 530 SSRYKPDDTVFSTIVKKVADDG 551
                P    ++ +V+ V D+G
Sbjct: 667 DRGVLPTAITWNILVRAVLDNG 688



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 218/437 (49%), Gaps = 8/437 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMAR----RNQIPDFHFCINLIRGLIRIDRI 168
           V  D    N ++  F  +G + +AS++ + + +       IP ++  IN   GL +  + 
Sbjct: 215 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN---GLCKCGKF 271

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           +++ ++   M  +    D  TY+ ++ GLC  G +  A  +  EM+ +G  PDV+ YNT+
Sbjct: 272 DESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTM 331

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L      G+ ++ +  WK   ++GC   +++Y ILI  + +   +  AI + + +  + C
Sbjct: 332 LNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEKDC 390

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             D +TY  LV+  CK G  + A+ ++    +   + ++  Y+++++ L   G  D V  
Sbjct: 391 CADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAG 450

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +LD M +    P     N +ING  +   ++ A+  F  MVSK C P +VTYNT++  L 
Sbjct: 451 VLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLS 510

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K    +EA  L+  +      P +ITY+ L++GL +   ++ A+ L+ Q +E G  PD  
Sbjct: 511 KAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVK 570

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            H  +I G C + +VE+A+ L  E+ +R        +  ++ G  K +  + A ++ + +
Sbjct: 571 MHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630

Query: 529 ISSRYKPDDTVFSTIVK 545
           +    +PD   ++  +K
Sbjct: 631 LQYGPQPDIISYNITLK 647



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 194/422 (45%), Gaps = 45/422 (10%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDN---GK 237
              P +++   ++  L       SA+++ D ++   G       ++ IL+ +FD      
Sbjct: 2   ASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAH 61

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM-AIEGCSPDIVTYN 296
             + +   + Q  K CP  +     +I+   K     +A+++   M  I GC P I +YN
Sbjct: 62  VSRIVELIRTQKCK-CPEDVAL--TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYN 118

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL+N   +  K+D+A        + G+ PN  TYN L+     +  +D   ++L+ M E 
Sbjct: 119 SLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQ 178

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV------------------ 398
             SP VF+Y  LIN L K G +  A+  F++M  +   PD+                   
Sbjct: 179 GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNA 238

Query: 399 ------------------TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                             +YN ++  LCK G  +E+ ++ H +  +     L TY+TLI 
Sbjct: 239 SEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH 298

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL   G ++ A  +Y +M ENG+SPD + + T++ G+ RA ++EE ++L K + K G + 
Sbjct: 299 GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT 358

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
             S Y ++I GL ++ KVD AI + EL+       D   +  +V  +  +G   +A  + 
Sbjct: 359 VVS-YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSIL 417

Query: 561 QK 562
           ++
Sbjct: 418 EE 419



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 84/328 (25%), Positives = 162/328 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++      K+ +A  + +++  ++   D      L+ GL +   + KA  +L+    
Sbjct: 363 NILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAEN 422

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
             G  DT  Y+ M+ GLC+ G++     +LD+M+  GC+P+    N ++       K + 
Sbjct: 423 GRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLED 482

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+ F+ + + KGC P ++TY  LI  + K    + A  ++ +M  +G  P+++TY+ L+N
Sbjct: 483 ALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMN 542

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+  K D A+ +    L +G +P+   +N ++H L S G  +   ++   M +    P
Sbjct: 543 GLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVP 602

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + T+N L+ G  K    +RA   ++ ++    QPDI++YN  L  LC    +++A+  L
Sbjct: 603 NLVTHNTLMEGFYKVRDFERASKIWDHILQYGPQPDIISYNITLKGLCSCHRISDAVGFL 662

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           +        P  IT+N L+  +   G +
Sbjct: 663 NDAVDRGVLPTAITWNILVRAVLDNGAL 690


>gi|224083888|ref|XP_002307160.1| predicted protein [Populus trichocarpa]
 gi|222856609|gb|EEE94156.1| predicted protein [Populus trichocarpa]
          Length = 726

 Score =  200 bits (509), Expect = 1e-48,   Method: Compositional matrix adjust.
 Identities = 156/599 (26%), Positives = 262/599 (43%), Gaps = 93/599 (15%)

Query: 61  LPGNVCID----RVNEVDQDEWSSESHVLA-VNKKLRGLTITKKSHDPSLPSSDGPFVEN 115
           L  ++CID    R+ E+    W  + + L  V +    +    K+ D      D  +V  
Sbjct: 76  LSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCNMAEFDKALDVFNEIHDRGWV-- 133

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKV 174
           DE   + ++  F   GK+  A +LI+ M  +N ++    FC +LI G ++  R++KA  +
Sbjct: 134 DEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFC-SLIYGFVKESRVDKALHL 192

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV------------ 222
              M  SG  PD   Y++++GGLC    ++ A+ L  EM     +PDV            
Sbjct: 193 FDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKIQPDVKIVTKLISSFSK 252

Query: 223 ---------------------ITYNTILRTMFDNGKFKQAIGFWK-------------DQ 248
                                + YN++L ++ DNG   +A    +              +
Sbjct: 253 EEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGSVHKAYHLLQAITIGNCIGDGEIGK 312

Query: 249 LRKG---CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           L +G    PP   T++I+I  + K   +  A+ +  DMA  GC PD++ YN+L++  C  
Sbjct: 313 LFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTS 372

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYN---------------------------------- 331
            +  ++  ++  +   G+EP S T N                                  
Sbjct: 373 NRLQESCGLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHS 432

Query: 332 -TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
            +L+  L   G      K L  M E    P +  Y+  ++GL K   VD+A+  F  + +
Sbjct: 433 TSLVKELCKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICA 492

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +   PD++ YN ++  LCK   + EA  LLH +      P  +TYNTLIDGL K   +E+
Sbjct: 493 QGYCPDVIAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEE 552

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           AM+    M+E    P+ IT+ TLI G C A + ++A+ L  E+G++G    + AY   IH
Sbjct: 553 AMLFLSMMIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIH 612

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           GL    + + A+  L  M     KPD  V+  ++     D     A+++ Q++++   F
Sbjct: 613 GLSNCGRPNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKF 671



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 102/352 (28%), Positives = 174/352 (49%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P++ T+++++ GL K G +  A+ L  +M+  GC+PD++ YN ++  +  + + +++ G 
Sbjct: 322 PNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESCGL 381

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            ++    G  P   T   +   +C++  I+ A+ +L  M I G  P I    SLV   CK
Sbjct: 382 LQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCK 441

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            GK  +A   + ++   G +P+ + Y+  L  L      D   K+   +    + P V  
Sbjct: 442 HGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIA 501

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YNILI GLCK   +  A N  ++M  K   P  VTYNT++  LCK   L EA+  L ++ 
Sbjct: 502 YNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMI 561

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P +ITY+TLI+GL   G  + A+VL+ +M   G +P  I +   I G     +  
Sbjct: 562 EKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPN 621

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           EA+  L+E+ +R  K     Y  +++         +A ++L+ M+     PD
Sbjct: 622 EALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPD 673



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/354 (28%), Positives = 169/354 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  +  T + ++      G L  A  L   MAR    PD     NLI GL   +R++++ 
Sbjct: 320 VPPNSTTFSIVINGLIKTGDLDLAVGLFRDMARIGCKPDLLLYNNLIDGLCTSNRLQESC 379

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +LQ M  SG  P + T N + G LC+R  I  A+ LL +M + G  P +    ++++ +
Sbjct: 380 GLLQEMEESGIEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKEL 439

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +GK  +A  F  D   +G  P ++ Y+  ++ + K   + +A+++  D+  +G  PD+
Sbjct: 440 CKHGKEVEACKFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDV 499

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + YN L+   CK  +  +A  +++ +  +G+ P+++TYNTL+  L      +     L +
Sbjct: 500 IAYNILIKGLCKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSM 559

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E    P V TY+ LINGLC  G  D A+  +N+M  K C P  + Y   +  L   G 
Sbjct: 560 MIEKEREPNVITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGR 619

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            NEAL  L  +      P    Y  L++          A  +  +M++ G  PD
Sbjct: 620 PNEALVYLREMEEREMKPDTYVYVGLLNAFLVDSNQPLAFEILQEMVDKGKFPD 673



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 135/295 (45%), Gaps = 8/295 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E    TNN I    C R  ++ A  L+  M     +P      +L++ L +  +  +A 
Sbjct: 390 IEPTSFTNNCIFGCLCRRHDISGALHLLKKMRIHGHVPWIKHSTSLVKELCKHGKEVEAC 449

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K L  M   G  PD + Y+  + GL K  ++  A+ L  ++   G  PDVI YN +++ +
Sbjct: 450 KFLVDMAEEGFQPDIVAYSACLDGLIKIQEVDQALKLFQDICAQGYCPDVIAYNILIKGL 509

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +  +A     +   KG  P  +TY  LI+ +CK   +  A+  L  M  +   P++
Sbjct: 510 CKTQRIAEAQNLLHEMEEKGLVPSAVTYNTLIDGLCKTDHLEEAMLFLSMMIEKEREPNV 569

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TY++L+N  C  G+ DDA+++ N +  +G  P+SI Y   +H L + G  +     L  
Sbjct: 570 ITYSTLINGLCNAGRPDDALVLWNEMGRKGCTPSSIAYMAFIHGLSNCGRPNEALVYLRE 629

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDR----AINSFNQMVSKNCQPDIVTYNTV 403
           M E    P  + Y  L+N      LVD     A     +MV K   PD+   N +
Sbjct: 630 MEEREMKPDTYVYVGLLNAF----LVDSNQPLAFEILQEMVDKGKFPDLHDKNHI 680



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 83/339 (24%), Positives = 150/339 (44%), Gaps = 25/339 (7%)

Query: 247 DQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           DQ++K   C P   +YT L+E + K   I      L +M   G   D  T   ++   C 
Sbjct: 54  DQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLEMRLKEMHDHGWGFDKYTLTPVLQVYCN 113

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             ++D A+ V N +  RG   +   ++ L+ +    G  D   ++++ M E +      T
Sbjct: 114 MAEFDKALDVFNEIHDRGW-VDEYVFSILVLAFSKWGKVDKACELIETMEEKNVRLNKKT 172

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           +  LI G  K   VD+A++ F++M      PDI  Y+ ++G LC    + +AL L   + 
Sbjct: 173 FCSLIYGFVKESRVDKALHLFDKMKKSGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMK 232

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT--HRTLIWGFCRADQ 482
           G    P +     LI   +K    E+ +  + + M   + P   T  + +++        
Sbjct: 233 GFKIQPDVKIVTKLISSFSK----EEELTCFFEEMHEDMDPKASTLLYNSVLNSLVDNGS 288

Query: 483 VEEAVDLLK-----------EIGK--RGNKM---RNSAYRLVIHGLCKSKKVDMAIQVLE 526
           V +A  LL+           EIGK  RG  M    ++ + +VI+GL K+  +D+A+ +  
Sbjct: 289 VHKAYHLLQAITIGNCIGDGEIGKLFRGKAMVPPNSTTFSIVINGLIKTGDLDLAVGLFR 348

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            M     KPD  +++ ++  +      +E+  L Q++ E
Sbjct: 349 DMARIGCKPDLLLYNNLIDGLCTSNRLQESCGLLQEMEE 387



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 46/218 (21%), Positives = 102/218 (46%), Gaps = 18/218 (8%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKE---GMLN 414
           SP    +  LI  L   GLV  A   F+Q+     C P+  +Y  +L  L K     +L 
Sbjct: 29  SPGALGF--LIRCLGNAGLVVEANLLFDQVQKMGLCVPNSYSYTCLLEVLSKSICIDLLE 86

Query: 415 EALQLLH----LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
             L+ +H      +  + +P L  Y  + +        +KA+ ++ ++ + G   D+   
Sbjct: 87  MRLKEMHDHGWGFDKYTLTPVLQVYCNMAE-------FDKALDVFNEIHDRGWV-DEYVF 138

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             L+  F +  +V++A +L++ + ++  ++    +  +I+G  K  +VD A+ + + M  
Sbjct: 139 SILVLAFSKWGKVDKACELIETMEEKNVRLNKKTFCSLIYGFVKESRVDKALHLFDKMKK 198

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           S + PD +++  I+  +  +   ++A  L+ ++  +K+
Sbjct: 199 SGFTPDISLYDVIIGGLCVNKDVKKALCLYSEMKGFKI 236


>gi|255584056|ref|XP_002532772.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527482|gb|EEF29611.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 647

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 226/449 (50%), Gaps = 7/449 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQI 177
           ++N ++++F + G + +   +   M + N I    F  N L+ GL+    IE A +V ++
Sbjct: 181 SSNSLIKSFGNLGMVEEVLWVWRRM-KENGIEPSLFSYNFLVNGLVNSKFIESAERVFEV 239

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M      PD +TYN M+ G C+ G+ R A   L  M +    PD ITY T+++  +  G 
Sbjct: 240 MENGKIGPDVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGD 299

Query: 238 FKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           F   +G + +   KG   PP++  Y+++I  +CK         V ++M  +GC  ++  Y
Sbjct: 300 FDSCLGLYHEMDEKGLEIPPHV--YSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIY 357

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++ + K G   +A+L+   +   G+EP+ +TY  +++SL   G  D   + ++  + 
Sbjct: 358 TALIDSNAKCGNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSG 417

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +     Y+ LI+GL K G VD A   F +MV K C PD   YN ++ AL K G ++E
Sbjct: 418 KGVAVNAMFYSSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDE 477

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL L   +    C   + TY  LI GL ++   E+A+ L+  M++ GI+P     R L  
Sbjct: 478 ALALSKRMEVDGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALST 537

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C + +V  A  +L E+   G  +  +A+  +I+ LCK+ ++  A ++ + ++    + 
Sbjct: 538 GLCLSGKVARACKILDEMAPMG-VIPETAFDDMINILCKAGRIKEACKLADGIVDRGREI 596

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              V + ++  +   G  + A KL +  I
Sbjct: 597 PGRVRTVLINALRKAGNADLALKLMRSKI 625



 Score =  146 bits (368), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 98/409 (23%), Positives = 179/409 (43%), Gaps = 35/409 (8%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y  ++  L   G + S  ++  +    G    V + N+++++  + G  ++ +  W+   
Sbjct: 147 YVSLIDVLATNGVLDSVKSVFSKFKEMGLIMTVYSSNSLIKSFGNLGMVEEVLWVWRRMK 206

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
             G  P L +Y  L+  +     I  A  V + M      PD+VTYN+++   C+ GK  
Sbjct: 207 ENGIEPSLFSYNFLVNGLVNSKFIESAERVFEVMENGKIGPDVVTYNTMIKGYCEVGKTR 266

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A   +  +  R + P+ ITY TL+ +  + G +D+   +   M+E         Y+++I
Sbjct: 267 KAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLYHEMDEKGLEIPPHVYSLVI 326

Query: 370 NGLCKYGLVDRAINSFNQMVSKNC-----------------------------------Q 394
            GLCK G        F  M+SK C                                   +
Sbjct: 327 GGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKCGNMGEAMLLFKRMKKEGLE 386

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD VTY  ++ +LCK G L+EAL+ +   +G   +   + Y++LIDGL K G +++A  +
Sbjct: 387 PDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAERI 446

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M++ G  PD   +  LI    +  +++EA+ L K +   G       Y ++I GL +
Sbjct: 447 FYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGLFR 506

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             + + A+ + +LMI     P    F  +   +   G    A K+  ++
Sbjct: 507 EHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEM 555



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 94/418 (22%), Positives = 179/418 (42%), Gaps = 36/418 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +++ +C  GK   A + +  M  RN  PD    + LI+        +    + 
Sbjct: 248 DVVTYNTMIKGYCEVGKTRKAFEKLKAMELRNVAPDKITYMTLIQACYAEGDFDSCLGLY 307

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G       Y++++GGLCK G+      + + M   GC+ +V  Y  ++ +    
Sbjct: 308 HEMDEKGLEIPPHVYSLVIGGLCKDGKRVEGYTVFENMISKGCKANVAIYTALIDSNAKC 367

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+  +K   ++G  P  +TY +++  +CK   +  A+E ++  + +G + + + Y
Sbjct: 368 GNMGEAMLLFKRMKKEGLEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFY 427

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +SL++   K G+ D+A  +   ++ +G  P+S  YN L+ +L   G  D    +   M  
Sbjct: 428 SSLIDGLGKSGRVDEAERIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEV 487

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                TV+TY ILI GL +    + A+  ++ M+ K   P    +  +   LC  G +  
Sbjct: 488 DGCDQTVYTYTILITGLFREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVAR 547

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A ++L                                    +M   G+ P +     +I 
Sbjct: 548 ACKILD-----------------------------------EMAPMGVIP-ETAFDDMIN 571

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
             C+A +++EA  L   I  RG ++      ++I+ L K+   D+A++++   I   Y
Sbjct: 572 ILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLMRSKIGIGY 629



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 67/238 (28%), Positives = 121/238 (50%), Gaps = 1/238 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E DE T   I+ + C  G+L +A + ++  + +    +  F  +LI GL +  R+++A 
Sbjct: 385 LEPDEVTYGVIVNSLCKSGRLDEALEYMEFCSGKGVAVNAMFYSSLIDGLGKSGRVDEAE 444

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   MV  G  PD+  YN ++  L K G+I  A+AL   M V GC+  V TY  ++  +
Sbjct: 445 RIFYEMVKKGCPPDSYCYNALIDALAKCGKIDEALALSKRMEVDGCDQTVYTYTILITGL 504

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F   + ++A+  W   + KG  P    +  L   +C    +ARA ++LD+MA  G  P+ 
Sbjct: 505 FREHRNEEALTLWDLMIDKGITPTAAAFRALSTGLCLSGKVARACKILDEMAPMGVIPE- 563

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
             ++ ++N  CK G+  +A  + + ++ RG E        L+++L   G  D   K++
Sbjct: 564 TAFDDMINILCKAGRIKEACKLADGIVDRGREIPGRVRTVLINALRKAGNADLALKLM 621


>gi|357494939|ref|XP_003617758.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355519093|gb|AET00717.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 906

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 129/452 (28%), Positives = 223/452 (49%), Gaps = 6/452 (1%)

Query: 119 TNNKILQNFC-----SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           T + +L N C       GK+  A K    M  +  +PD      LI  L +  R+++A +
Sbjct: 270 TADLVLYNVCIDCFGKVGKVDMAWKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVE 329

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + + ++  VP    YN M+ G    G+   A +LL+     GC P VI YN IL  + 
Sbjct: 330 LFEELDLNRSVPCVYAYNTMIMGYGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLG 389

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK ++A+    D++R+   P L TY ILI+ +CK   +  A++V D M   G  P+I+
Sbjct: 390 RKGKVEEALRI-HDEMRQDAAPNLTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIM 448

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T N +++  CK  K D+A  +   L  +   P+S T+ +L+  LG RG  D    + + M
Sbjct: 449 TVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKM 508

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            ++   P V  Y  LI    K G  +     + +MV + C PD++  N+ +  + K G +
Sbjct: 509 LDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEV 568

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +   L   +      P + +Y+ LI GL K G   +   L+ +M E G+  D + + T+
Sbjct: 569 EKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTV 628

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I GFC++ +V++A  LL+E+  +G +     Y  V+ GL K  ++D A  + E   S   
Sbjct: 629 IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGV 688

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +  ++S+++      G  +EAY + ++L++
Sbjct: 689 DLNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 720



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 220/444 (49%), Gaps = 1/444 (0%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +++ +F    KL +A  +I++M +    P F     LI  L   +R +    +   M   
Sbjct: 173 ELVASFVKSHKLKEAFGVIEMMRKFKFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEI 232

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   +   +  +V    + G+I +A++LLDEM  +    D++ YN  +      GK   A
Sbjct: 233 GYEANVHLFTTLVRVFAREGRIDAALSLLDEMKSNSFTADLVLYNVCIDCFGKVGKVDMA 292

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
             F+ +   +G  P  +TYT LI  +CK   +  A+E+ +++ +    P +  YN+++  
Sbjct: 293 WKFFHEMKAQGLVPDDVTYTTLIGVLCKARRLDEAVELFEELDLNRSVPCVYAYNTMIMG 352

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
               GK+D+A  ++     +G  P+ I YN +L  LG +G  +   +I D M + + +P 
Sbjct: 353 YGSAGKFDEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIHDEMRQDA-APN 411

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + TYNILI+ LCK G ++ A+   + M      P+I+T N ++  LCK   L+EA  +  
Sbjct: 412 LTTYNILIDMLCKAGELEAALKVQDTMKEAGLFPNIMTVNIMIDRLCKAQKLDEACSIFL 471

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L+   CSP   T+ +LIDGL ++G ++ A  LY +M+++   P+ + + +LI  F +  
Sbjct: 472 GLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCG 531

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           + E+   + KE+  RG           +  + K+ +V+    + E + +    PD   +S
Sbjct: 532 RKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYS 591

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++  +   G + E YKL+ ++ E
Sbjct: 592 ILIHGLVKAGFSRETYKLFYEMKE 615



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 104/406 (25%), Positives = 198/406 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +T   ++     RG++ DA  L + M   +QIP+     +LI+   +  R E   K+ 
Sbjct: 481 DSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIY 540

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV  G  PD +  N  +  + K G++    AL +E+   G  PDV +Y+ ++  +   
Sbjct: 541 KEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDVRSYSILIHGLVKA 600

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++    + +   +G    ++ Y  +I+  CK   + +A ++L++M  +G  P +VTY
Sbjct: 601 GFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTY 660

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            S+V+   K  + D+A ++     S G++ N + Y++L+   G  G  D    IL+ + +
Sbjct: 661 GSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQ 720

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P  +T+N L++ L K   +D A   F  M +  C P+ +TY+ ++  LC     N+
Sbjct: 721 KGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNK 780

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A      +      P  ITY T+I GLAK G + +A  L+ +   +G  PD   +  +I 
Sbjct: 781 AFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIE 840

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G   A++  +A  + +E   +G ++ +    +++  L K+  ++ A
Sbjct: 841 GLSSANKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHKADCLEQA 886



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 109/411 (26%), Positives = 197/411 (47%), Gaps = 6/411 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   KL +A  +   +  +   PD     +LI GL R  R++ A  + + M
Sbjct: 449 TVNIMIDRLCKAQKLDEACSIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKM 508

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + S  +P+ + Y  ++    K G+      +  EM   GC PD++  N+ +  +F  G+ 
Sbjct: 509 LDSDQIPNVVVYTSLIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEV 568

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++    +++   +G  P + +Y+ILI  + K        ++  +M  +G   D++ YN++
Sbjct: 569 EKGRALFEEIKAQGLVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTV 628

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK D A  ++  + ++G++P  +TY +++  L      D +D+   +  EA  
Sbjct: 629 IDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAK---IDRLDEAYMLFEEAKS 685

Query: 359 ---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 V  Y+ LI+G  K G +D A     +++ K   P+  T+N +L AL K   ++E
Sbjct: 686 IGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDE 745

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A      +    CSP  +TY+ +I+GL       KA V + +M + G+ P++IT+ T+I 
Sbjct: 746 AQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIA 805

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           G  +A  V EA  L       G    ++ Y  +I GL  + K   A  V E
Sbjct: 806 GLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFE 856



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 111/450 (24%), Positives = 218/450 (48%), Gaps = 12/450 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G+L  A K+ D M      P      N++   I IDR+ KA K+ +  
Sbjct: 414 TYNILIDMLCKAGELEAALKVQDTMKEAGLFP------NIMTVNIMIDRLCKAQKLDEAC 467

Query: 179 VMSGGV------PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +  G+      PD+ T+  ++ GL +RG++  A +L ++M  S   P+V+ Y ++++  
Sbjct: 468 SIFLGLDHKVCSPDSRTFCSLIDGLGRRGRVDDAYSLYEKMLDSDQIPNVVVYTSLIQNF 527

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F  G+ +     +K+ + +GC P L+     ++ V K   + +   + +++  +G  PD+
Sbjct: 528 FKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQGLVPDV 587

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            +Y+ L++   K G   +   +   +  +G+  + + YNT++      G  D   ++L+ 
Sbjct: 588 RSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAYQLLEE 647

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      PTV TY  +++GL K   +D A   F +  S     ++V Y++++    K G 
Sbjct: 648 MKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGFGKVGR 707

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++EA  +L  L     +P   T+N L+D L K   +++A V +  M     SP+ +T+  
Sbjct: 708 IDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNAMTYSI 767

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G C   +  +A    +E+ K+G K  N  Y  +I GL K+  V  A  + +   +S 
Sbjct: 768 MINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDRFKASG 827

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             PD   ++ +++ ++      +AY ++++
Sbjct: 828 GVPDSACYNAMIEGLSSANKAMDAYIVFEE 857



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 92/370 (24%), Positives = 157/370 (42%), Gaps = 41/370 (11%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++QNF   G+  D  K+   M  R   PD     + +  + +   +EK   + + +   G
Sbjct: 523 LIQNFFKCGRKEDGHKIYKEMVHRGCSPDLMLLNSYMDCVFKAGEVEKGRALFEEIKAQG 582

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD  +Y++++ GL K G  R    L  EM   G   DV+ YNT++     +GK  +A 
Sbjct: 583 LVPDVRSYSILIHGLVKAGFSRETYKLFYEMKEQGLHLDVLAYNTVIDGFCKSGKVDKAY 642

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++   KG  P ++TY  +++ + K   +  A  + ++    G   ++V Y+SL++  
Sbjct: 643 QLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKSIGVDLNVVIYSSLIDGF 702

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K G+ D+A L++  L+ +G+ PNS T+N LL +L      D        M     SP  
Sbjct: 703 GKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDEAQVCFQNMKNLKCSPNA 762

Query: 363 FTYNILI-----------------------------------NGLCKYGLVDRAINSFNQ 387
            TY+I+I                                    GL K G V  A   F++
Sbjct: 763 MTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIAGLAKAGNVMEARGLFDR 822

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT---LIDGLAK 444
             +    PD   YN ++  L      N+A+    +   +    C +   T   L+D L K
Sbjct: 823 FKASGGVPDSACYNAMIEGLSSA---NKAMDAYIVFEETRLKGCRVNSKTCVVLLDALHK 879

Query: 445 KGCMEKAMVL 454
             C+E+A ++
Sbjct: 880 ADCLEQAAIV 889



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 65/274 (23%), Positives = 114/274 (41%), Gaps = 35/274 (12%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIP------------------------------ 150
           N ++  FC  GK+  A +L++ M  +   P                              
Sbjct: 626 NTVIDGFCKSGKVDKAYQLLEEMKTKGLQPTVVTYGSVVDGLAKIDRLDEAYMLFEEAKS 685

Query: 151 ---DFHFCI--NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRS 205
              D +  I  +LI G  ++ RI++A  +L+ ++  G  P++ T+N ++  L K  +I  
Sbjct: 686 IGVDLNVVIYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNSYTWNCLLDALVKAEEIDE 745

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A      M    C P+ +TY+ ++  +    KF +A  FW++  ++G  P  ITYT +I 
Sbjct: 746 AQVCFQNMKNLKCSPNAMTYSIMINGLCMIRKFNKAFVFWQEMQKQGLKPNNITYTTMIA 805

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            + K   +  A  + D     G  PD   YN+++       K  DA +V      +G   
Sbjct: 806 GLAKAGNVMEARGLFDRFKASGGVPDSACYNAMIEGLSSANKAMDAYIVFEETRLKGCRV 865

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           NS T   LL +L    C +    +  ++ E + S
Sbjct: 866 NSKTCVVLLDALHKADCLEQAAIVGAVLREMAKS 899



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 37/187 (19%), Positives = 85/187 (45%), Gaps = 10/187 (5%)

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN-GSSCSPCLITYN 436
           V+ A+N F++M     QP+++     +G + +   +N A Q    +   +  + C   YN
Sbjct: 87  VEEALNVFDEM----SQPEVI-----VGVMKRLKDVNVAFQYFRWVERKTQQAHCPEVYN 137

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
             +  +A+   ++    +  +M   G    +     L+  F ++ +++EA  +++ + K 
Sbjct: 138 AFLMVMARTRNLDYLEQILEEMSVAGFGLSNHVSVELVASFVKSHKLKEAFGVIEMMRKF 197

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
             +   SAY  +I  L  + + D  + +   M    Y+ +  +F+T+V+  A +G  + A
Sbjct: 198 KFRPAFSAYTTLIGALSAANRPDPMLTLFHQMQEIGYEANVHLFTTLVRVFAREGRIDAA 257

Query: 557 YKLWQKL 563
             L  ++
Sbjct: 258 LSLLDEM 264


>gi|224054827|ref|XP_002298371.1| predicted protein [Populus trichocarpa]
 gi|222845629|gb|EEE83176.1| predicted protein [Populus trichocarpa]
          Length = 915

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 110/419 (26%), Positives = 216/419 (51%), Gaps = 2/419 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD +  + +IR    +    KA +++Q M  S    + + YN+++ GLCK  ++  A+ +
Sbjct: 226 PDIYIYVAVIRSFCELKNFAKAKEMIQRMESSD--LNVVVYNVLIHGLCKNKRVWEAVEI 283

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
            + +   G     +TY T++  +    +F+   G   + +  G  P     + L+E + +
Sbjct: 284 KNGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRR 343

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
           +  +  A ++++ +   G  P +  YN+L+N  CK GK+D+A L+   +  +G+  N +T
Sbjct: 344 KGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVT 403

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y+ L+ S   RG  D     L  M  A    TV+ YN LING CK G +  A++ F++M+
Sbjct: 404 YSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMI 463

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            K  +P +V+Y +++   C +G L+EA +L H + G   +P   T+ TLI  L +   M 
Sbjct: 464 DKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMT 523

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A  L+ +M+E  + P+++T+  +I G C+     +A +LL ++ ++G       YR +I
Sbjct: 524 DAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLI 583

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             LC + +V  A + ++ +    +K ++  +S ++     +G   +A  + +++++  V
Sbjct: 584 SSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGV 642



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 120/422 (28%), Positives = 215/422 (50%), Gaps = 3/422 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C++GKL +A +L   M  +   P+ +    LI  L R +R+  A ++   M+   
Sbjct: 477 LISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQN 536

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +P+ +TYN+M+ G CK G    A  LL++M   G  PD  TY  ++ ++   G+  +A 
Sbjct: 537 MMPNEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAK 596

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            F  D  R+      + Y+ L+   CK+  +  A+ V  +M   G   D+V Y  L++ +
Sbjct: 597 KFIDDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGT 656

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+        ++ N+  + + P+ + Y +++      G       I DIM +   +P +
Sbjct: 657 IKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNI 716

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH- 421
            TY  LIN LCK GL+D+A   + +M+  N  P+ VTY   L  L +EG + +A+QL + 
Sbjct: 717 VTYTTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHND 776

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           +L G   +   ++YN L+ G  K G +E+A  L  +M++N I PD IT+ T+I+  CR  
Sbjct: 777 MLKGLLANT--VSYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRG 834

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            ++ A++    +  +G K    AY  +I+G C + ++  A ++ + MI    KP+     
Sbjct: 835 NLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHK 894

Query: 542 TI 543
           ++
Sbjct: 895 SL 896



 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 122/480 (25%), Positives = 224/480 (46%), Gaps = 38/480 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N ++ + C  GK  +A  L   M  +     D  + I LI    R  +++ A   L  M+
Sbjct: 370 NALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSI-LIDSFCRRGKLDTAIHFLGKMI 428

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           M+G       YN ++ G CK G + +A++  DEM   G +P V++Y +++    + GK  
Sbjct: 429 MAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLH 488

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A   + +   KG  P   T+T LI  + +   +  A  + D+M  +   P+ VTYN ++
Sbjct: 489 EAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMI 548

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              CK+G    A  ++N ++ +G+ P++ TY  L+ SL S G      K +D ++     
Sbjct: 549 EGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFK 608

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC-------------------------- 393
                Y+ L++G CK G +  A+    +MV +                            
Sbjct: 609 LNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGL 668

Query: 394 ---------QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
                    +PD V Y +++    K G + +A  +  ++    C+P ++TY TLI+ L K
Sbjct: 669 LKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCK 728

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G M+KA +L+ +M+ +  +P+ +T+   +    R   +E+AV L  ++ K G      +
Sbjct: 729 AGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK-GLLANTVS 787

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y +++ G CK  +V+ A ++L+ MI +   PD   +STI+ +    G  + A + W  ++
Sbjct: 788 YNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTML 847



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/446 (24%), Positives = 221/446 (49%), Gaps = 2/446 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N ++   C   ++ +A ++ + + ++     +  +C  L+ GL ++   E  + V+  M+
Sbjct: 265 NVLIHGLCKNKRVWEAVEIKNGLIQKGLTASEVTYC-TLVLGLCKVQEFEVGAGVMDEMI 323

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G VP     + +V GL ++G++  A  L++ +   G  P +  YN ++ ++  +GKF 
Sbjct: 324 ELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFD 383

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A   +K+   KG     +TY+ILI+  C++  +  AI  L  M + G    +  YNSL+
Sbjct: 384 EAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLI 443

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  CK G    AV   + ++ +G++P  ++Y +L+    ++G      ++   M     +
Sbjct: 444 NGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIA 503

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P  +T+  LI+ L +   +  A   F++M+ +N  P+ VTYN ++   CKEG   +A +L
Sbjct: 504 PNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTYNVMIEGHCKEGNTVKAFEL 563

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L+ +      P   TY  LI  L   G + +A      +       +++ +  L+ G+C+
Sbjct: 564 LNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHREHFKLNEMCYSALLHGYCK 623

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             ++ +A+ + +E+ KRG  M    Y ++I G  K +       +L+ M   R +PD  +
Sbjct: 624 EGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVI 683

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIE 565
           +++++   +  G  ++A+ +W  +I+
Sbjct: 684 YTSMIDGYSKAGSVKKAFGIWDIMID 709



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 124/499 (24%), Positives = 231/499 (46%), Gaps = 4/499 (0%)

Query: 69  RVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPF---VENDEKTNNKILQ 125
           +  E+ Q   SS+ +V+  N  + GL   K+  + ++   +G     +   E T   ++ 
Sbjct: 246 KAKEMIQRMESSDLNVVVYNVLIHGLCKNKRVWE-AVEIKNGLIQKGLTASEVTYCTLVL 304

Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
             C   +    + ++D M     +P      +L+ GL R  ++  A  ++  +   G +P
Sbjct: 305 GLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRKGKVVDAFDLVNRVKKVGAMP 364

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
               YN ++  LCK G+   A  L  EM   G   + +TY+ ++ +    GK   AI F 
Sbjct: 365 SLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTYSILIDSFCRRGKLDTAIHFL 424

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
              +  G    +  Y  LI   CK   ++ A+   D+M  +G  P +V+Y SL++  C +
Sbjct: 425 GKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMIDKGLKPTVVSYTSLISGYCNK 484

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           GK  +A  + + +  +G+ PN+ T+ TL+ +L          ++ D M E +  P   TY
Sbjct: 485 GKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTDAFRLFDEMLEQNMMPNEVTY 544

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N++I G CK G   +A    NQMV K   PD  TY  ++ +LC  G + EA + +  L+ 
Sbjct: 545 NVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFIDDLHR 604

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
                  + Y+ L+ G  K+G +  A+ +  +M++ G+  D + +  LI G  +      
Sbjct: 605 EHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSA 664

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
              LLK +  +  +     Y  +I G  K+  V  A  + ++MI     P+   ++T++ 
Sbjct: 665 VFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLIN 724

Query: 546 KVADDGMTEEAYKLWQKLI 564
           ++   G+ ++A  LW++++
Sbjct: 725 ELCKAGLMDKAELLWKEML 743



 Score =  170 bits (431), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/364 (28%), Positives = 175/364 (48%), Gaps = 1/364 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N +++  C  G    A +L++ M ++  +PD +    LI  L    R+ +A K +
Sbjct: 540 NEVTYNVMIEGHCKEGNTVKAFELLNQMVQKGLVPDTYTYRPLISSLCSTGRVCEAKKFI 599

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +       + + Y+ ++ G CK G++R A+ +  EM   G + D++ Y  ++      
Sbjct: 600 DDLHREHFKLNEMCYSALLHGYCKEGRLRDALGVCREMVKRGVDMDLVCYAVLIDGTIKE 659

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                  G  K+   +   P  + YT +I+   K   + +A  + D M  EGC+P+IVTY
Sbjct: 660 QDTSAVFGLLKNMHDQRLRPDKVIYTSMIDGYSKAGSVKKAFGIWDIMIDEGCTPNIVTY 719

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L+N  CK G  D A L+   +L     PN +TY   L  L   G  +   ++ + M +
Sbjct: 720 TTLINELCKAGLMDKAELLWKEMLVSNSTPNHVTYCCFLDHLAREGSMEKAVQLHNDMLK 779

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              + TV +YNIL+ G CK G V+ A    ++M+     PD +TY+T++   C+ G L+ 
Sbjct: 780 GLLANTV-SYNILVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDG 838

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A++    +      P  + YN LI G    G + KA  L   M+  G+ P+  TH++L  
Sbjct: 839 AIEFWDTMLNKGLKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSH 898

Query: 476 GFCR 479
           G  R
Sbjct: 899 GASR 902



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 92/336 (27%), Positives = 164/336 (48%), Gaps = 13/336 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN------LIRGLIRIDRIE 169
           D  T   ++ + CS G++ +A K ID + R       HF +N      L+ G  +  R+ 
Sbjct: 575 DTYTYRPLISSLCSTGRVCEAKKFIDDLHRE------HFKLNEMCYSALLHGYCKEGRLR 628

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A  V + MV  G   D + Y +++ G  K     +   LL  M      PD + Y +++
Sbjct: 629 DALGVCREMVKRGVDMDLVCYAVLIDGTIKEQDTSAVFGLLKNMHDQRLRPDKVIYTSMI 688

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                 G  K+A G W   + +GC P ++TYT LI ++CK   + +A  +  +M +   +
Sbjct: 689 DGYSKAGSVKKAFGIWDIMIDEGCTPNIVTYTTLINELCKAGLMDKAELLWKEMLVSNST 748

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P+ VTY   ++   ++G  + AV + N++L +G+  N+++YN L+      G  +   K+
Sbjct: 749 PNHVTYCCFLDHLAREGSMEKAVQLHNDML-KGLLANTVSYNILVRGFCKLGRVEEATKL 807

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           LD M + +  P   TY+ +I   C+ G +D AI  ++ M++K  +PD + YN ++   C 
Sbjct: 808 LDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKGLKPDTLAYNFLIYGCCI 867

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            G L +A +L   +      P   T+ +L  G ++K
Sbjct: 868 AGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRK 903



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 99/430 (23%), Positives = 193/430 (44%), Gaps = 21/430 (4%)

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVP------------------DTITYNMMVG 195
           FCI LI  L+  +    AS +LQ +++ GG+                    ++ +++++ 
Sbjct: 108 FCI-LIHALVNANLFWPASSLLQTLLLRGGLDPREVFEALLDCFEKCDFISSLGFDLLIQ 166

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
              +  ++  ++ +   M      P V T   +L  +    +    +  + + L  G  P
Sbjct: 167 SYVQEKRMFDSVLIFRLMRQCELMPQVRTLGEVLNGLAKIRRVDMVLVLFGEILSMGIRP 226

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            +  Y  +I   C+    A+A E++  M  E    ++V YN L++  CK  +  +AV + 
Sbjct: 227 DIYIYVAVIRSFCELKNFAKAKEMIQRM--ESSDLNVVVYNVLIHGLCKNKRVWEAVEIK 284

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           N L+ +G+  + +TY TL+  L     ++    ++D M E    PT    + L+ GL + 
Sbjct: 285 NGLIQKGLTASEVTYCTLVLGLCKVQEFEVGAGVMDEMIELGFVPTEAALSSLVEGLRRK 344

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G V  A +  N++      P +  YN ++ +LCK+G  +EA  L   +         +TY
Sbjct: 345 GKVVDAFDLVNRVKKVGAMPSLFVYNALINSLCKDGKFDEAELLFKEMGEKGLCANDVTY 404

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           + LID   ++G ++ A+   G+M+  GI      + +LI G C+   +  AV    E+  
Sbjct: 405 SILIDSFCRRGKLDTAIHFLGKMIMAGIKITVYPYNSLINGHCKLGNLSAAVSFFDEMID 464

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           +G K    +Y  +I G C   K+  A ++   M      P+   F+T++  +       +
Sbjct: 465 KGLKPTVVSYTSLISGYCNKGKLHEAFRLYHEMTGKGIAPNTYTFTTLISALFRANRMTD 524

Query: 556 AYKLWQKLIE 565
           A++L+ +++E
Sbjct: 525 AFRLFDEMLE 534



 Score = 68.9 bits (167), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 35/117 (29%), Positives = 61/117 (52%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+RG  ++ R+E+A+K+L  M+ +   PD ITY+ ++   C+RG +  AI   D M   G
Sbjct: 791 LVRGFCKLGRVEEATKLLDEMIDNAIFPDCITYSTIIYQCCRRGNLDGAIEFWDTMLNKG 850

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
            +PD + YN ++      G+  +A     D +R+G  P   T+  L     ++  I+
Sbjct: 851 LKPDTLAYNFLIYGCCIAGELGKAFELRDDMIRRGVKPNQATHKSLSHGASRKFSIS 907


>gi|225443946|ref|XP_002272135.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Vitis vinifera]
          Length = 733

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 239/488 (48%), Gaps = 38/488 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E   +    ++ ++   GKL +A +++ +M +    PD   C   I  L+  +R++KA 
Sbjct: 165 IERRPEAFGYVMVSYSRAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAV 224

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI--------- 223
           + L+ M +    P+ ITYN ++ G C   ++  A+ L+ EM   GC PD I         
Sbjct: 225 RFLERMQIVEIEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFL 284

Query: 224 ---------------------------TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
                                      TYNT +  +  +G   +A+ F ++   +     
Sbjct: 285 CKEKRIKEVRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVD 344

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
            + Y+ ++   C++  + +A E++++M  +GC PD+VTY S++N  C++ K D A  ++ 
Sbjct: 345 KVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLR 404

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +   G +PN+++Y  LL+ L   G      +++++  E    P   TY++L++G  + G
Sbjct: 405 QMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREG 464

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
               A +   +M+ K   P  V  N ++ +LC+E  ++EA + +     + C+  ++ + 
Sbjct: 465 KSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFT 524

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           T+I G  +K  +E A+ L   M  +   PD +T+ T+I    +  ++EEA  L  ++ + 
Sbjct: 525 TVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 584

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       YR VIH  C+  +V+  +++LE M+S   +   T ++ +++K+   G  E+A
Sbjct: 585 GLIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQA 642

Query: 557 YKLWQKLI 564
           YKL  K++
Sbjct: 643 YKLLGKVL 650



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 128/446 (28%), Positives = 222/446 (49%), Gaps = 3/446 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T N +++ +C   +L DA +LI  M  +   PD      ++  L +  RI++  
Sbjct: 235 IEPNVITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVR 294

Query: 173 KVLQIMVM-SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +++ M+  S  +PD +TYN  V  L K G    A+  L E        D + Y+ I+ +
Sbjct: 295 LLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHS 354

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G+  +A     +   KGC P ++TYT +I  +C++  + +A ++L  M   GC P+
Sbjct: 355 FCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPN 414

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            V+Y +L+N  CK G   +A  ++N        PN+ITY+ L+H     G       ++ 
Sbjct: 415 TVSYTALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVR 474

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M +    PT    N+LI  LC+   VD A     Q ++  C  ++V + TV+   C++ 
Sbjct: 475 EMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKD 534

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L  AL LL  +  S+  P ++TY T+ID L KKG +E+A  L  +M+  G+ P  +T+R
Sbjct: 535 DLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGLIPTPVTYR 594

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           T+I  +CR  +VE+ + LL+++  R      +AY  VI  LC    ++ A ++L  ++ +
Sbjct: 595 TVIHQYCRMGRVEDLLKLLEKMLSRQEC--RTAYNQVIEKLCSFGNLEQAYKLLGKVLRT 652

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAY 557
             K D      +++     G+   +Y
Sbjct: 653 ASKIDANTCHMLIESYLSKGIPLMSY 678



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 96/364 (26%), Positives = 166/364 (45%), Gaps = 41/364 (11%)

Query: 244 FWKD-QLRKGCPPYLITYTILIEQVCKQC-GIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +W D Q R    P +    + I    K C G  R + ++    IE   P+   Y  +V++
Sbjct: 122 YWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIER-RPEAFGY-VMVSY 179

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
           S + GK  +A+ V+  +   G+EP+    NT +H L      D   + L+ M      P 
Sbjct: 180 S-RAGKLRNAMRVLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPN 238

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TYN LI G C    ++ A+    +M  K C PD ++Y TV+G LCKE  + E   L+ 
Sbjct: 239 VITYNCLIKGYCDLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLME 298

Query: 422 -LLNGSSCSPCLITYNTLIDGLAK-----------------------------------K 445
            +L  S+  P  +TYNT +  L+K                                   +
Sbjct: 299 KMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCRE 358

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G M+KA  +  +M   G  PD +T+ ++I G C+  +V++A  +L+++ K G K    +Y
Sbjct: 359 GRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSY 418

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +++GLCK+     A +++ +     + P+   +S ++     +G + EA  L +++I+
Sbjct: 419 TALLNGLCKNGNSLEAREMMNMSEEDWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 478

Query: 566 WKVF 569
              F
Sbjct: 479 KGFF 482



 Score = 82.0 bits (201), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 109/250 (43%), Gaps = 10/250 (4%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIM--NEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           + I Y  +L  L          ++L +M        P  F Y ++     + G +  A+ 
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMV--SYSRAGKLRNAMR 190

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               M     +PD+   NT +  L     L++A++ L  +      P +ITYN LI G  
Sbjct: 191 VLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIEPNVITYNCLIKGYC 250

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
               +E AM L  +M   G SPD I++ T++   C+  +++E   L++++ K  N + + 
Sbjct: 251 DLHRLEDAMELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKEVRLLMEKMLKDSNLLPDQ 310

Query: 504 -AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y   +H L K    D A++ L      R++ D   +S IV     +G  ++A     K
Sbjct: 311 VTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKA-----K 365

Query: 563 LIEWKVFEKG 572
            I  ++F KG
Sbjct: 366 EIVNEMFSKG 375


>gi|297745840|emb|CBI15896.3| unnamed protein product [Vitis vinifera]
          Length = 650

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 119/451 (26%), Positives = 222/451 (49%), Gaps = 2/451 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T N +++  C + +   A +L++ M  +   PD      LI  L +   +  A K+   
Sbjct: 150 QTYNILIKISCRKKQFDKAKELLNWMWEQGFSPDVFSYGTLINSLAKNGYMSDALKLFDE 209

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNG 236
           M   G  PD   YN+++ G  K+G I +A  + + +       P++ +YN ++  +   G
Sbjct: 210 MPERGVTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCG 269

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           KF ++   W    +      L TY+ LI  +C    +  A  V  +MA  G SPD+V YN
Sbjct: 270 KFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYN 329

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +++N   + G+ ++ + +   +   G     ++YN L+  L      D    I +++ E 
Sbjct: 330 TMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEK 388

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
                  TY +L++GLCK G +++A++   +  +     D   Y++++  LC+EG L+E 
Sbjct: 389 DCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEV 448

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             +L  +    C P     N +I+G  +   +E A+  +G M+  G  P  +T+ TLI G
Sbjct: 449 AGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLING 508

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             +A++  EA  L+KE+  +G K     Y L+++GLC+ KK+DMA+ +    +   +KPD
Sbjct: 509 LSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPD 568

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
             + + I+  +   G  E+A +L+ ++ + K
Sbjct: 569 VKMHNIIIHGLCSSGKVEDALQLYSEMKQRK 599



 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 125/448 (27%), Positives = 221/448 (49%), Gaps = 10/448 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMS 181
           ++ +    G ++DA KL D M  R   PD   C N LI G  +   I  AS++ + ++  
Sbjct: 190 LINSLAKNGYMSDALKLFDEMPERGVTPDVA-CYNILIDGFFKKGDILNASEIWERLLKG 248

Query: 182 GGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
             V P+  +YN+M+ GLCK G+   +  +   M  +    D+ TY+T++  +  +G    
Sbjct: 249 PSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDG 308

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   +K+    G  P ++ Y  ++    +   I   +E+   M  EGC   +V+YN L+ 
Sbjct: 309 ATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILIR 367

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +  K D+A+ +   L  +    +S+TY  L+H L   G    ++K L I+ EA +  
Sbjct: 368 GLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNG---YLNKALSILEEAENGR 424

Query: 361 ---TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
                F Y+ +INGLC+ G +D      +QM    C+P+    N V+    +   L +AL
Sbjct: 425 GDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDAL 484

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +    +    C P ++TYNTLI+GL+K     +A  L  +M+  G  P+ IT+  L+ G 
Sbjct: 485 RFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGL 544

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  +++ A++L  +  ++G K     + ++IHGLC S KV+ A+Q+   M   +  P+ 
Sbjct: 545 CQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNL 604

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +T+++        E A K+W  +++
Sbjct: 605 VTHNTLMEGFYKVRDFERASKIWDHILQ 632



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/423 (26%), Positives = 212/423 (50%), Gaps = 8/423 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMAR----RNQIPDFHFCINLIRGLIRIDRI 168
           V  D    N ++  F  +G + +AS++ + + +       IP ++  IN   GL +  + 
Sbjct: 215 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN---GLCKCGKF 271

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           +++ ++   M  +    D  TY+ ++ GLC  G +  A  +  EM+ +G  PDV+ YNT+
Sbjct: 272 DESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTM 331

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L      G+ ++ +  WK   ++GC   +++Y ILI  + +   +  AI + + +  + C
Sbjct: 332 LNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEKDC 390

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             D +TY  LV+  CK G  + A+ ++    +   + ++  Y+++++ L   G  D V  
Sbjct: 391 CADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAG 450

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +LD M +    P     N +ING  +   ++ A+  F  MVSK C P +VTYNT++  L 
Sbjct: 451 VLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLS 510

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K    +EA  L+  +      P +ITY+ L++GL +   ++ A+ L+ Q +E G  PD  
Sbjct: 511 KAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVK 570

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            H  +I G C + +VE+A+ L  E+ +R        +  ++ G  K +  + A ++ + +
Sbjct: 571 MHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTHNTLMEGFYKVRDFERASKIWDHI 630

Query: 529 ISS 531
           + S
Sbjct: 631 LQS 633



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 106/384 (27%), Positives = 185/384 (48%), Gaps = 1/384 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           GP V  +  + N ++   C  GK  ++ ++   M +  +  D +    LI GL     ++
Sbjct: 248 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 307

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A++V + M  +G  PD + YN M+ G  + G+I   + L   M   GC   V++YN ++
Sbjct: 308 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILI 366

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           R +F+N K  +AI  W+    K C    +TY +L+  +CK   + +A+ +L++       
Sbjct: 367 RGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGD 426

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            D   Y+S++N  C++G+ D+   V++ +   G +PN    N +++        +   + 
Sbjct: 427 LDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRF 486

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M      PTV TYN LINGL K      A     +M+ K  +P+++TY+ ++  LC+
Sbjct: 487 FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQ 546

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              L+ AL L          P +  +N +I GL   G +E A+ LY +M +    P+ +T
Sbjct: 547 GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVT 606

Query: 470 HRTLIWGFCRADQVEEAVDLLKEI 493
           H TL+ GF +    E A  +   I
Sbjct: 607 HNTLMEGFYKVRDFERASKIWDHI 630



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 110/416 (26%), Positives = 191/416 (45%), Gaps = 45/416 (10%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDN---GK 237
              P +++   ++  L       SA+++ D ++   G       ++ IL+ +FD      
Sbjct: 2   ASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFDPKLVAH 61

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM-AIEGCSPDIVTYN 296
             + +   + Q  K CP  +     +I+   K     +A+++   M  I GC P I +YN
Sbjct: 62  VSRIVELIRTQKCK-CPEDVAL--TVIKAYAKNSMPDQALDIFQRMHEIFGCQPGIRSYN 118

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL+N   +  K+D+A        + G+ PN  TYN L+     +  +D   ++L+ M E 
Sbjct: 119 SLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWEQ 178

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV------------------ 398
             SP VF+Y  LIN L K G +  A+  F++M  +   PD+                   
Sbjct: 179 GFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNA 238

Query: 399 ------------------TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                             +YN ++  LCK G  +E+ ++ H +  +     L TY+TLI 
Sbjct: 239 SEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIH 298

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL   G ++ A  +Y +M ENG+SPD + + T++ G+ RA ++EE ++L K + K G + 
Sbjct: 299 GLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRT 358

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
             S Y ++I GL ++ KVD AI + EL+       D   +  +V  +  +G   +A
Sbjct: 359 VVS-YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKA 413



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/228 (26%), Positives = 108/228 (47%), Gaps = 15/228 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    + ++   C  G+L + + ++D M +    P+ H C  +I G +R  ++E A +  
Sbjct: 428 DTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPHVCNAVINGFVRASKLEDALRFF 487

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  P  +TYN ++ GL K  +   A AL+ EM   G +P++ITY+ ++  +   
Sbjct: 488 GNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLHKGWKPNMITYSLLMNGLCQG 547

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K   A+  W   L KG  P +  + I+I  +C    +  A+++  +M    C P++VT+
Sbjct: 548 KKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRKCVPNLVTH 607

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
           N+L+     +G Y            R  E  S  ++ +L S  S  C+
Sbjct: 608 NTLM-----EGFYK----------VRDFERASKIWDHILQSWSSSNCY 640


>gi|302784232|ref|XP_002973888.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
 gi|300158220|gb|EFJ24843.1| hypothetical protein SELMODRAFT_100264 [Selaginella moellendorffii]
          Length = 399

 Score =  200 bits (509), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/379 (32%), Positives = 199/379 (52%), Gaps = 6/379 (1%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGF 244
           D  TY ++V   C  G++++A+ LL EM    G  P    YN  +  +  +GK  +A+  
Sbjct: 17  DNYTYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEV 76

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            K+     C P ++T+  LI  +CK   +  A +VLD+M   G + ++VTYN+L+N    
Sbjct: 77  VKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSS 136

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE-ASHSPTVF 363
            G+  +AVLV+  + +    P++ TYN ++H     G  D     L+ M + A  SP  F
Sbjct: 137 AGRSGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTF 193

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVS-KNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           TY+ILINGLCK   + +A     +M+  K+C   +V +NT++   CK   L+ A +LL  
Sbjct: 194 TYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSS 253

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +    C+P ++TY+T+IDGL + G ++K   L  +M+  G  PD +T+  L+ G C+A +
Sbjct: 254 MLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGK 313

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + EA  L+K + + G       Y LV  GLCK  K+DMA  +L  +       D   F  
Sbjct: 314 MVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEA 373

Query: 543 IVKKVADDGMTEEAYKLWQ 561
           ++  V    +   A++ W+
Sbjct: 374 LLLSVKKRLLDRAAFQKWK 392



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 102/343 (29%), Positives = 177/343 (51%), Gaps = 6/343 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           L+R       ++ A  +L+ M    G+ P    YN  V  LCK G++  A+ ++  M   
Sbjct: 24  LVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKNMKDG 83

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
            C+PDV+T+NT++  +   G+  +A     +  R G    L+TY  LI  +        A
Sbjct: 84  ACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEA 143

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLH 335
           + V+  M     +PD  TYN++++  CK G+ D A   +  +  R G  P++ TY+ L++
Sbjct: 144 VLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSILIN 200

Query: 336 SLGSRGCWDAVDKIL-DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            L         D++L +++       +V  +N L++G CK   +DRA    + M+   C 
Sbjct: 201 GLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCA 260

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD+VTY+T++  LC+ G +++   LL  +    C P ++TY  L+ GL K G M +A  L
Sbjct: 261 PDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRL 320

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
             +M+E+G +P+ +T+  +  G C+ D+++ A DLL  I  +G
Sbjct: 321 VKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKG 363



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 97/302 (32%), Positives = 156/302 (51%), Gaps = 5/302 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  +   C  GK+ +A +++  M      PD      LI GL +  R+++A +VL  M  
Sbjct: 58  NFFVHALCKSGKVPEAMEVVKNMKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMER 117

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           SG   + +TYN ++ GL   G+   A+ ++  M+ +   PD  TYN I+     +G+  +
Sbjct: 118 SGFAANLVTYNTLINGLSSAGRSGEAVLVMQGMTTT---PDTQTYNAIIHGFCKSGEIDR 174

Query: 241 AIGFWKD-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM-AIEGCSPDIVTYNSL 298
           A GF ++ + R GC P   TY+ILI  +CK   + +A E+L +M   + C   +V +N+L
Sbjct: 175 AYGFLEEMKQRAGCSPDTFTYSILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTL 234

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  CK    D A  +++++L  G  P+ +TY+T++  L   G  D    +L+ M     
Sbjct: 235 VDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGC 294

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TY +L+ GLCK G +  A     +M+   C P+ VTY+ V   LCK   L+ A  
Sbjct: 295 KPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFDGLCKIDKLDMAND 354

Query: 419 LL 420
           LL
Sbjct: 355 LL 356



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 94/310 (30%), Positives = 153/310 (49%), Gaps = 6/310 (1%)

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           TY +L+   C    +  A+++L +M  + G +P    YN  V+  CK GK  +A+ V+ N
Sbjct: 20  TYFVLVRAHCLAGELQAAMDLLREMEQQPGMAPTPSMYNFFVHALCKSGKVPEAMEVVKN 79

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +     +P+ +T+NTL+  L   G  D   ++LD M  +  +  + TYN LINGL   G 
Sbjct: 80  MKDGACKPDVVTFNTLIAGLCKAGRLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGR 139

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG-SSCSPCLITYN 436
              A+     M +    PD  TYN ++   CK G ++ A   L  +   + CSP   TY+
Sbjct: 140 SGEAVLVMQGMTT---TPDTQTYNAIIHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYS 196

Query: 437 TLIDGLAKKGCMEKAMVLYGQMM-ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
            LI+GL K   + KA  L  +M+         +   TL+ G+C+A  ++ A +LL  + +
Sbjct: 197 ILINGLCKSSNLRKADELLQEMIGRKDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLE 256

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G       Y  +I GLC+   VD    +LE M+S   KPD   ++ +V  +   G   E
Sbjct: 257 HGCAPDVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVE 316

Query: 556 AYKLWQKLIE 565
           A +L ++++E
Sbjct: 317 ACRLVKRMLE 326



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 76/288 (26%), Positives = 129/288 (44%), Gaps = 46/288 (15%)

Query: 69  RVNEVDQ--DEWSSE---SHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKI 123
           R++E  Q  DE       ++++  N  + GL+   +S +  L    G     D +T N I
Sbjct: 104 RLDEAQQVLDEMERSGFAANLVTYNTLINGLSSAGRSGEAVLVMQ-GMTTTPDTQTYNAI 162

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQI-PD-FHFCINLIRGLIRIDRIEKASKVLQIMV-- 179
           +  FC  G++  A   ++ M +R    PD F + I LI GL +   + KA ++LQ M+  
Sbjct: 163 IHGFCKSGEIDRAYGFLEEMKQRAGCSPDTFTYSI-LINGLCKSSNLRKADELLQEMIGR 221

Query: 180 ----------------------------------MSGGVPDTITYNMMVGGLCKRGQIRS 205
                                               G  PD +TY+ ++ GLC+ G +  
Sbjct: 222 KDCCASVVAFNTLVDGYCKAQDLDRARELLSSMLEHGCAPDVVTYSTIIDGLCRCGDVDK 281

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
             ALL++M   GC+PDV+TY  ++  +   GK  +A    K  L  GC P  +TY+++ +
Sbjct: 282 GFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLVKRMLEDGCTPNAVTYSLVFD 341

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
            +CK   +  A ++L  +  +G   D+V + +L+  S K+   D A  
Sbjct: 342 GLCKIDKLDMANDLLTSIRDKGRITDVVAFEALL-LSVKKRLLDRAAF 388



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 34/135 (25%), Positives = 64/135 (47%), Gaps = 8/135 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + I+   C  G +     L++ M  R   PD      L+ GL +  ++ +A +++
Sbjct: 262 DVVTYSTIIDGLCRCGDVDKGFALLEKMVSRGCKPDVVTYTVLVTGLCKAGKMVEACRLV 321

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL----RT 231
           + M+  G  P+ +TY+++  GLCK  ++  A  LL  +   G   DV+ +  +L    + 
Sbjct: 322 KRMLEDGCTPNAVTYSLVFDGLCKIDKLDMANDLLTSIRDKGRITDVVAFEALLLSVKKR 381

Query: 232 MFDNGKFKQAIGFWK 246
           + D   F++    WK
Sbjct: 382 LLDRAAFQK----WK 392


>gi|255557743|ref|XP_002519901.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223540947|gb|EEF42505.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 777

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 215/431 (49%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           +L  ++A +   P    C  L+  L++ + ++ + +V  IM   G  PD   ++ MV   
Sbjct: 148 ELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAF 207

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C  G++  AI L  +M   G  P+V+TYN I+  +  NG+  +A  F +   ++   P L
Sbjct: 208 CTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSL 267

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +TY +LI  + K      A  +L +M+  G +P+ V YN+L++  C+ G    A+ + ++
Sbjct: 268 VTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDD 327

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           ++S G+ PNS+T N+L+         +  + +L+ M          T+  +I+ LC    
Sbjct: 328 MISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCR 387

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            D A+    +M+ +N +P+      ++  LC+ G  +EA++L + L     +   +T N 
Sbjct: 388 FDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNA 447

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI GL + G  E+A  L  +M+E G+  D I++ TLI   C+  +VEE   L +E+ +RG
Sbjct: 448 LIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRG 507

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            +     Y +++HGLC   K++ A  +      +   PD   +  ++         EE  
Sbjct: 508 IQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGE 567

Query: 558 KLWQKLIEWKV 568
           KL+Q+++  K+
Sbjct: 568 KLFQEMVTMKI 578



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 221/442 (50%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           KT N +L +     ++  + ++ DIM      PD +    ++       R++ A ++ + 
Sbjct: 163 KTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVYLFSTMVNAFCTGGRVDDAIELFRK 222

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+ +TYN ++ GLCK G++  A    ++M     +P ++TY  ++  +    +
Sbjct: 223 MEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKMEKERVKPSLVTYGVLINGLVKLER 282

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A    K+   +G  P  + Y  LI+  C+   I+ A+++ DDM   G SP+ VT NS
Sbjct: 283 FDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNS 342

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   CK  + + A  ++  +L+ G   N  T+ +++H L  +  +D+    +  M   +
Sbjct: 343 LIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRN 402

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P      +L++GLC+ G    AI  + +++ K    + VT N ++  LC+ G   EA 
Sbjct: 403 FKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAA 462

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL  +         I+YNTLI    K+G +E+   L  +M+  GI PD  T+  L+ G 
Sbjct: 463 KLLKEMLERGLVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGL 522

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C   ++EEA  L  E  K GN      Y ++I G CK+ +V+   ++ + M++ + + + 
Sbjct: 523 CNMGKIEEAGGLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNA 582

Query: 538 TVFSTIVKKVADDGMTEEAYKL 559
            V+ T+++   ++G   EA++L
Sbjct: 583 VVYGTLIRAYCENGNMREAFRL 604



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 217/439 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G ++ A ++ D M      P+   C +LI+G  + +++E A  +L+ M+ 
Sbjct: 306 NTLIDGYCRIGNISTALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLT 365

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            GGV +  T+  ++  LC + +  SA+  + EM +   +P+      ++  +  NGK  +
Sbjct: 366 GGGVINQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSE 425

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI  W   L KG     +T   LI  +C+      A ++L +M   G   D ++YN+L+ 
Sbjct: 426 AIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLIL 485

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK+GK ++   +   ++ RG++P+  TYN LLH L + G  +    +     +  + P
Sbjct: 486 ACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFP 545

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             +TY I+I+G CK   V+     F +MV+   + + V Y T++ A C+ G + EA +L 
Sbjct: 546 DAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLR 605

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +          TY++LI GL+  G ++ A  L  +M + G+SP+ + +  LI G+C+ 
Sbjct: 606 DDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKL 665

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            Q+ +   +L+E+           Y ++I+G CK   +  A ++L  M      PD   +
Sbjct: 666 GQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTY 725

Query: 541 STIVKKVADDGMTEEAYKL 559
           + +      +G  EEA K+
Sbjct: 726 NALTNGFCKEGKMEEALKV 744



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 111/355 (31%), Positives = 185/355 (52%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  GK ++A +L   +  +    +      LI GL      E+A+K+L+ M+  G
Sbjct: 413 LVSGLCQNGKQSEAIELWYRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERG 472

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V D+I+YN ++   CK G++     L +EM   G +PD+ TYN +L  + + GK ++A 
Sbjct: 473 LVLDSISYNTLILACCKEGKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAG 532

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G W +  + G  P   TY I+I+  CK   +    ++  +M       + V Y +L+   
Sbjct: 533 GLWHECKKNGNFPDAYTYGIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAY 592

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G   +A  + +++ SRG+   S TY++L+H L + G  D+ +++LD M +   SP V
Sbjct: 593 CENGNMREAFRLRDDMRSRGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNV 652

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             Y  LI G CK G + +  +   +M   N  P+ +TY  ++   CK G +  A +LL+ 
Sbjct: 653 VCYTALIGGYCKLGQMHKVDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNE 712

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +      P  +TYN L +G  K+G ME+A+ +   M   GIS DDIT+ TLI G+
Sbjct: 713 MAQKGIVPDAVTYNALTNGFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDGW 767



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 106/396 (26%), Positives = 191/396 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T   ++   C + +   A   I  M  RN  P+      L+ GL +  +  +A ++ 
Sbjct: 371 NQGTFTSVIHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELW 430

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             ++  G   +T+T N ++ GLC+ G    A  LL EM   G   D I+YNT++      
Sbjct: 431 YRLLEKGFAANTVTSNALIHGLCEAGSKEEAAKLLKEMLERGLVLDSISYNTLILACCKE 490

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK ++     ++ +R+G  P + TY +L+  +C    I  A  +  +    G  PD  TY
Sbjct: 491 GKVEEGFKLKEEMVRRGIQPDMYTYNMLLHGLCNMGKIEEAGGLWHECKKNGNFPDAYTY 550

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             +++  CK  + ++   +   +++  +E N++ Y TL+ +    G      ++ D M  
Sbjct: 551 GIMIDGYCKANRVEEGEKLFQEMVTMKIEQNAVVYGTLIRAYCENGNMREAFRLRDDMRS 610

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                T  TY+ LI+GL   GLVD A    ++M  +   P++V Y  ++G  CK G +++
Sbjct: 611 RGIPQTSATYSSLIHGLSNIGLVDSANQLLDEMRKEGLSPNVVCYTALIGGYCKLGQMHK 670

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
              +L  ++ ++  P  ITY  +I+G  K G M+ A  L  +M + GI PD +T+  L  
Sbjct: 671 VDSILQEMSINNVHPNKITYTIMINGHCKLGNMKAAAKLLNEMAQKGIVPDAVTYNALTN 730

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           GFC+  ++EEA+ +   +   G  + +  Y  +I G
Sbjct: 731 GFCKEGKMEEALKVCDLMSTGGISLDDITYTTLIDG 766



 Score =  152 bits (384), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 87/297 (29%), Positives = 156/297 (52%)

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K  G     E+   +A +G  P + T N L++   K  +   +  V + +   G+ P+  
Sbjct: 139 KHLGFGVVFELFSLLANKGLFPSLKTCNFLLSSLVKANEVKMSYQVFDIMCHCGVTPDVY 198

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            ++T++++  + G  D   ++   M +   +P V TYN +I+GLCK G +D A     +M
Sbjct: 199 LFSTMVNAFCTGGRVDDAIELFRKMEKVGVAPNVVTYNNIIHGLCKNGRLDEAFQFKEKM 258

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             +  +P +VTY  ++  L K    +EA  +L  ++    +P  + YNTLIDG  + G +
Sbjct: 259 EKERVKPSLVTYGVLINGLVKLERFDEANCILKEMSDRGYAPNNVVYNTLIDGYCRIGNI 318

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
             A+ +   M+ NGISP+ +T  +LI G+C+++Q+E A  LL+E+   G  +    +  V
Sbjct: 319 STALQIRDDMISNGISPNSVTCNSLIQGYCKSNQMEHAEHLLEEMLTGGGVINQGTFTSV 378

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           IH LC   + D A+  +  M+   +KP+D + + +V  +  +G   EA +LW +L+E
Sbjct: 379 IHRLCLKCRFDSALLFIMEMLLRNFKPNDGLLTLLVSGLCQNGKQSEAIELWYRLLE 435


>gi|147833070|emb|CAN77584.1| hypothetical protein VITISV_034996 [Vitis vinifera]
          Length = 913

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 133/483 (27%), Positives = 221/483 (45%), Gaps = 39/483 (8%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N +L       K  +A             P+      LI+   R  + +KA ++L  
Sbjct: 90  RSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNW 149

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  PD  +Y  ++  L K G +  A+ L DEM   G  PDV  YN ++   F  G 
Sbjct: 150 MWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGD 209

Query: 238 FKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              A   W ++L KG    P + +Y ++I  +CK      + E+   M       D+ TY
Sbjct: 210 ILNASEIW-ERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTY 268

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++  C  G  D A  V   +   G+ P+ + YNT+L+     G  +   ++  +M E
Sbjct: 269 STLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVM-E 327

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                TV +YNILI GL +   VD AI+ +  +  K+C  D +TY  ++  LCK G LN+
Sbjct: 328 KEGCRTVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNK 387

Query: 416 ALQLLH----------------LLNG-------------------SSCSPCLITYNTLID 440
           AL +L                 ++NG                     C P     N +I+
Sbjct: 388 ALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVIN 447

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  +   +E A+  +G M+  G  P  +T+ TLI G  +A++  EA  L+KE+ ++G K 
Sbjct: 448 GFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKP 507

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y L+++GLC+ KK+DMA+ +    +   +KPD  + + I+  +   G  E+A +L+
Sbjct: 508 NMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLY 567

Query: 561 QKL 563
            ++
Sbjct: 568 SEM 570



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/423 (27%), Positives = 205/423 (48%), Gaps = 36/423 (8%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           GP V  +  + N ++   C  GK  ++ ++   M +  +  D +    LI GL     ++
Sbjct: 223 GPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLD 282

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A++V + M  +G  PD + YN M+ G  + G+I   + L   M   GC   V++YN ++
Sbjct: 283 GATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCR-TVVSYNILI 341

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE----------- 278
           R +F+N K  +AI  W+    K C    +TY +L+  +CK   + +A+            
Sbjct: 342 RGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGD 401

Query: 279 ------------------------VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
                                   VLD M   GC P+    N+++N   +  K +DA+  
Sbjct: 402 LDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRF 461

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
             N++S+G  P  +TYNTL++ L     +     ++  M +    P + TY++L+NGLC+
Sbjct: 462 FGNMVSKGCFPTVVTYNTLINGLSKAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQ 521

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
              +D A+N + Q + K  +PD+  +N ++  LC  G + +ALQL   +   +C P L+T
Sbjct: 522 GKKLDMALNLWCQALEKGFKPDVKMHNIIIHGLCSSGKVEDALQLYSEMKQRNCVPNLVT 581

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           +NTL++G  K    E+A  ++  +++ G+ PD I++   + G C   ++ +AV  L +  
Sbjct: 582 HNTLMEGFYKVRDFERASKIWDHILQYGLQPDIISYNITLKGLCSCHRISDAVGFLNDAV 641

Query: 495 KRG 497
            RG
Sbjct: 642 DRG 644



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 119/442 (26%), Positives = 220/442 (49%), Gaps = 18/442 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMAR----RNQIPDFHFCINLIRGLIRIDRI 168
           V  D    N ++  F  +G + +AS++ + + +       IP ++  IN   GL +  + 
Sbjct: 190 VTPDVACYNILIDGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMIN---GLCKCGKF 246

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           +++ ++   M  +    D  TY+ ++ GLC  G +  A  +  EM+ +G  PDV+ YNT+
Sbjct: 247 DESFEIWHRMKKNERGQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTM 306

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L      G+ ++ +  WK   ++GC   +++Y ILI  + +   +  AI + + +  + C
Sbjct: 307 LNGYLRAGRIEECLELWKVMEKEGCRT-VVSYNILIRGLFENAKVDEAISIWELLPEKDC 365

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             D +TY  LV+  CK G  + A+ ++    +   + ++  Y+++++ L   G  D V  
Sbjct: 366 CADSMTYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAG 425

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +LD M +    P  +  N +ING  +   ++ A+  F  MVSK C P +VTYNT++  L 
Sbjct: 426 VLDQMTKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLS 485

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K    +EA  L+  +      P +ITY+ L++GL +   ++ A+ L+ Q +E G  PD  
Sbjct: 486 KAERFSEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVK 545

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH-----GLCKSKKVDMAIQ 523
            H  +I G C + +VE+A+ L  E+     K RN    LV H     G  K +  + A +
Sbjct: 546 MHNIIIHGLCSSGKVEDALQLYSEM-----KQRNCVPNLVTHNTLMEGFYKVRDFERASK 600

Query: 524 VLELMISSRYKPDDTVFSTIVK 545
           + + ++    +PD   ++  +K
Sbjct: 601 IWDHILQYGLQPDIISYNITLK 622



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/342 (27%), Positives = 185/342 (54%), Gaps = 2/342 (0%)

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           + GC+P + +YN++L  + ++ K+ +A  F+      G  P L TY ILI+  C++    
Sbjct: 82  IFGCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFD 141

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
           +A E+L+ M  +G SPD+ +Y +L+N   K G   DA+ + + +  RG+ P+   YN L+
Sbjct: 142 KAKELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILI 201

Query: 335 HSLGSRGCWDAVDKILD-IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
                +G      +I + ++   S  P + +YN++INGLCK G  D +   +++M     
Sbjct: 202 DGFFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNER 261

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
             D+ TY+T++  LC  G L+ A ++   +  +  SP ++ YNT+++G  + G +E+ + 
Sbjct: 262 GQDLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLE 321

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L+  M + G     +++  LI G     +V+EA+ + + + ++     +  Y +++HGLC
Sbjct: 322 LWKVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLC 380

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           K+  ++ A+ +LE   + R   D   +S+++  +  +G  +E
Sbjct: 381 KNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDE 422



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/394 (24%), Positives = 186/394 (47%), Gaps = 2/394 (0%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P   +YN ++  L +  +   A +        G  P++ TYN +++      +F +A
Sbjct: 84  GCQPGIRSYNSLLNALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKA 143

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
                    +G  P + +Y  LI  + K   ++ A+++ D+M   G +PD+  YN L++ 
Sbjct: 144 KELLNWMWGQGFSPDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDG 203

Query: 302 SCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             K+G   +A  +   LL    + PN  +YN +++ L   G +D   +I   M +     
Sbjct: 204 FFKKGDILNASEIWERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQ 263

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            ++TY+ LI+GLC  G +D A   + +M      PD+V YNT+L    + G + E L+L 
Sbjct: 264 DLYTYSTLIHGLCGSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELW 323

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            ++    C   +++YN LI GL +   +++A+ ++  + E     D +T+  L+ G C+ 
Sbjct: 324 KVMEKEGCR-TVVSYNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKN 382

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             + +A+ +L+E       +   AY  +I+GLC+  ++D    VL+ M     KP+  V 
Sbjct: 383 GYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQMTKHGCKPNPYVC 442

Query: 541 STIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           + ++         E+A + +  ++    F    T
Sbjct: 443 NAVINGFVRASKLEDALRFFGNMVSKGCFPTVVT 476



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 110/438 (25%), Positives = 202/438 (46%), Gaps = 11/438 (2%)

Query: 71  NEVDQD--EWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFC 128
           NE  QD   +S+  H L  +  L G T   K       + +G  V  D    N +L  + 
Sbjct: 259 NERGQDLYTYSTLIHGLCGSGNLDGATRVYKEM-----AENG--VSPDVVVYNTMLNGYL 311

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
             G++ +  +L  +M +        + I LIRGL    ++++A  + +++       D++
Sbjct: 312 RAGRIEECLELWKVMEKEGCRTVVSYNI-LIRGLFENAKVDEAISIWELLPEKDCCADSM 370

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TY ++V GLCK G +  A+++L+E      + D   Y++++  +   G+  +  G     
Sbjct: 371 TYGVLVHGLCKNGYLNKALSILEEAENGRGDLDTFAYSSMINGLCREGRLDEVAGVLDQM 430

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
            + GC P       +I    +   +  A+    +M  +GC P +VTYN+L+N   K  ++
Sbjct: 431 TKHGCKPNPYVCNAVINGFVRASKLEDALRFFGNMVSKGCFPTVVTYNTLINGLSKAERF 490

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            +A  ++  +L +G +PN ITY+ L++ L      D    +     E    P V  +NI+
Sbjct: 491 SEAYALVKEMLQKGWKPNMITYSLLMNGLCQGKKLDMALNLWCQALEKGFKPDVKMHNII 550

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I+GLC  G V+ A+  +++M  +NC P++VT+NT++    K      A ++   +     
Sbjct: 551 IHGLCSSGKVEDALQLYSEMKQRNCVPNLVTHNTLMEGFYKVRDFERASKIWDHILQYGL 610

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P +I+YN  + GL     +  A+      ++ G+ P  IT   L+ G+       E V 
Sbjct: 611 QPDIISYNITLKGLCSCHRISDAVGFLNDAVDRGVLPTAITWNILVQGYLALKGYMEPVF 670

Query: 489 LLKEI-GKRGNKMRNSAY 505
           +   + G  G +MR   +
Sbjct: 671 VPASMKGNPGMQMRYFGF 688



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 107/419 (25%), Positives = 191/419 (45%), Gaps = 64/419 (15%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS-VSGCEPDVITYNTILRTMFDNGKFKQ 240
              P +++   ++  L       SA+++ D ++   G       ++ IL+ +FD      
Sbjct: 2   ASAPKSLSPKRVIKLLKSEKNPHSALSIFDSVTRFPGYSHTPYVFHHILKRLFD------ 55

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM-AIEGCSPDIVTYNSLV 299
                         P L+ +      +  Q     A+++   M  I GC P I +YNSL+
Sbjct: 56  --------------PKLVAHAYAKNSMPDQ-----ALDIFQRMHEIFGCQPGIRSYNSLL 96

Query: 300 N-----------------------------------FSCKQGKYDDAVLVINNLLSRGME 324
           N                                    SC++ ++D A  ++N +  +G  
Sbjct: 97  NALIESNKWDEAESFFLYFETMGLSPNLQTYNILIKISCRKKQFDKAKELLNWMWGQGFS 156

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P+  +Y TL++SL   G      K+ D M E   +P V  YNILI+G  K G +  A   
Sbjct: 157 PDVFSYGTLINSLAKNGYMSDALKLFDEMPERGVTPDVACYNILIDGFFKKGDILNASEI 216

Query: 385 FNQMV-SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
           + +++   +  P+I +YN ++  LCK G  +E+ ++ H +  +     L TY+TLI GL 
Sbjct: 217 WERLLKGPSVYPNIPSYNVMINGLCKCGKFDESFEIWHRMKKNERGQDLYTYSTLIHGLC 276

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
             G ++ A  +Y +M ENG+SPD + + T++ G+ RA ++EE ++L K + K G +   S
Sbjct: 277 GSGNLDGATRVYKEMAENGVSPDVVVYNTMLNGYLRAGRIEECLELWKVMEKEGCRTVVS 336

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            Y ++I GL ++ KVD AI + EL+       D   +  +V  +  +G   +A  + ++
Sbjct: 337 -YNILIRGLFENAKVDEAISIWELLPEKDCCADSMTYGVLVHGLCKNGYLNKALSILEE 394


>gi|326527027|dbj|BAK04455.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 860

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 116/411 (28%), Positives = 206/411 (50%), Gaps = 4/411 (0%)

Query: 157 NLIRGLIRIDRIEKASKVL-QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
            L++ L   +R E+A  VL   M   G VP+  +Y++++ GLC     + A+ L   M+ 
Sbjct: 197 TLLKCLCYANRTEEAVNVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAK 256

Query: 216 SG--CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
            G  C P+V+ YNT++   F  G+  +A   + +  R+G  P ++TY ++I+ +CK   +
Sbjct: 257 EGGACSPNVVAYNTVIHGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAM 316

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            +A  VL  M   G  PD VTYN +++     G+  +A  +   + SRG+ PN +  N+ 
Sbjct: 317 DKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSF 376

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           L SL   G      +I D M    H P + +Y  L++G    G     I  FN M S   
Sbjct: 377 LASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGI 436

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
             D   +N ++ A  K GM+++A+ +   +     SP ++TY+T+I   ++ G +  AM 
Sbjct: 437 AADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAME 496

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGL 512
            + QM+  GI P+   + ++I GFC    + +A +L+ E+  +G    +   +  VI+ L
Sbjct: 497 KFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSL 556

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           CK  +V  A  + +L+     +PD   F++++      G  ++A+K+   +
Sbjct: 557 CKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAM 607



 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 227/452 (50%), Gaps = 1/452 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N I+   C    +  A  ++  M      PD      +I G   + R+++A+
Sbjct: 296 VKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQPDTVTYNCMIHGYATLGRLKEAA 355

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+ + M   G +P+ +  N  +  LCK G+ + A  + D M+  G +PD+++Y T+L   
Sbjct: 356 KMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEIFDSMTAKGHKPDIVSYCTLLHGY 415

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G F   IG +      G       + ILI    K+  +  A+ +  +M  +G SPD+
Sbjct: 416 ASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRGMVDDAMLIFTEMQQQGVSPDV 475

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW-DAVDKILD 351
           VTY+++++   + G+  DA+   N +++RG++PN+  Y++++      G    A + + +
Sbjct: 476 VTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYHSIIQGFCMHGGLVKAKELVSE 535

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           ++N+    P +  +N +IN LCK G V  A + F+ +     +PD++T+ +++   C  G
Sbjct: 536 MINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVG 595

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +++A ++L  +        ++TY+TL+DG  K G +   + L+ +M   G+ P+ +T+ 
Sbjct: 596 KMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYG 655

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            ++ G  RA +   A     E+ + G  +  S Y +++ GLC++   D AI + + + + 
Sbjct: 656 IMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTM 715

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             K   T+ +T++  +      EEA +L+  +
Sbjct: 716 NVKFSITILNTMINAMYKVQRKEEAKELFATI 747



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/498 (23%), Positives = 219/498 (43%), Gaps = 36/498 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            + D  T N ++  + + G+L +A+K+   M  R  IP+   C + +  L +  R ++A+
Sbjct: 331 AQPDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAA 390

Query: 173 KVLQIMVMSGGVPDTITY-----------------------------------NMMVGGL 197
           ++   M   G  PD ++Y                                   N+++   
Sbjct: 391 EIFDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAY 450

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
            KRG +  A+ +  EM   G  PDV+TY+T++      G+   A+  +   + +G  P  
Sbjct: 451 AKRGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNT 510

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGC-SPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
             Y  +I+  C   G+ +A E++ +M  +G   PDIV +NS++N  CK G+  DA  + +
Sbjct: 511 AVYHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFD 570

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +   G  P+ IT+ +L+      G  D   KILD M        + TY+ L++G  K G
Sbjct: 571 LVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNG 630

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            ++  +  F +M  K  +P+ VTY  +L  L + G    A +  H +  S  +  +  Y 
Sbjct: 631 RINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYG 690

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            ++ GL +  C ++A++L+ ++    +        T+I    +  + EEA +L   I   
Sbjct: 691 IILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISAS 750

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G     S Y ++I  L K   V+ A  +   M  S   P   + + I++ + + G   +A
Sbjct: 751 GLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKA 810

Query: 557 YKLWQKLIEWKVFEKGTT 574
                K+   ++  + +T
Sbjct: 811 GNYLSKVDGKRILLEAST 828



 Score =  164 bits (416), Expect = 9e-38,   Method: Compositional matrix adjust.
 Identities = 101/417 (24%), Positives = 205/417 (49%), Gaps = 40/417 (9%)

Query: 184 VPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
           VP T+ TY++++   C+  +    + L   +  +G +   IT +T+L+ +    + ++A+
Sbjct: 153 VPLTVHTYSILMDCCCRARRPDLGLVLFGCILRTGLKIHQITASTLLKCLCYANRTEEAV 212

Query: 243 GFWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLV 299
                ++ + GC P + +Y+I+++ +C      RA+++   MA EG  CSP++V YN+++
Sbjct: 213 NVLLHRMSELGCVPNVFSYSIILKGLCDNSMSQRALDLFQMMAKEGGACSPNVVAYNTVI 272

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +   K+G+   A  + + +  +G++P+ +TYN ++ +L      D  + +L  M      
Sbjct: 273 HGFFKEGETGKACSLFHEMTRQGVKPDVVTYNLIIDALCKARAMDKAELVLRQMTTNGAQ 332

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   TYN +I+G    G +  A   F +M S+   P+IV  N+ L +LCK G   EA ++
Sbjct: 333 PDTVTYNCMIHGYATLGRLKEAAKMFRKMKSRGLIPNIVICNSFLASLCKHGRSKEAAEI 392

Query: 420 LHLLNGSSCSPCLITY-----------------------------------NTLIDGLAK 444
              +      P +++Y                                   N LI   AK
Sbjct: 393 FDSMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAK 452

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           +G ++ AM+++ +M + G+SPD +T+ T+I  F R  ++ +A++   ++  RG +   + 
Sbjct: 453 RGMVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAV 512

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRY-KPDDTVFSTIVKKVADDGMTEEAYKLW 560
           Y  +I G C    +  A +++  MI+    +PD   F++++  +  DG   +A+ ++
Sbjct: 513 YHSIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIF 569



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 116/427 (27%), Positives = 201/427 (47%), Gaps = 25/427 (5%)

Query: 95  TITKKSHDPSLPS---------SDGPFVE-----NDEKTN---------NKILQNFCSRG 131
           ++T K H P + S         S+G F +     N  K+N         N ++  +  RG
Sbjct: 395 SMTAKGHKPDIVSYCTLLHGYASEGWFADMIGLFNSMKSNGIAADCRVFNILIHAYAKRG 454

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
            + DA  +   M ++   PD      +I    R+ R+  A +    MV  G  P+T  Y+
Sbjct: 455 MVDDAMLIFTEMQQQGVSPDVVTYSTVISAFSRMGRLTDAMEKFNQMVARGIQPNTAVYH 514

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGC-EPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
            ++ G C  G +  A  L+ EM   G   PD++ +N+++ ++  +G+   A   +     
Sbjct: 515 SIIQGFCMHGGLVKAKELVSEMINKGIPRPDIVFFNSVINSLCKDGRVMDAHDIFDLVTD 574

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P +IT+T LI+  C    + +A ++LD M + G   DIVTY++L++   K G+ +D
Sbjct: 575 IGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEVVGVETDIVTYSTLLDGYFKNGRIND 634

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
            + +   +  +G++PN++TY  +L  L   G   A  K    M E+  + TV  Y I++ 
Sbjct: 635 GLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVAARKKFHEMIESGTTVTVSIYGIILG 694

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GLC+    D AI  F ++ + N +  I   NT++ A+ K     EA +L   ++ S   P
Sbjct: 695 GLCRNNCADEAIILFQKLGTMNVKFSITILNTMINAMYKVQRKEEAKELFATISASGLLP 754

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
              TY  +I  L K G +E A  ++  M ++GI P       +I       ++ +A + L
Sbjct: 755 NESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVPGSRLLNRIIRMLLEKGEIAKAGNYL 814

Query: 491 KEI-GKR 496
            ++ GKR
Sbjct: 815 SKVDGKR 821



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/300 (22%), Positives = 139/300 (46%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++ + C  G++ DA  + D++    + PD     +LI G   + +++KA K+L  M +
Sbjct: 550 NSVINSLCKDGRVMDAHDIFDLVTDIGERPDVITFTSLIDGYCLVGKMDKAFKILDAMEV 609

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D +TY+ ++ G  K G+I   + L  EM   G +P+ +TY  +L  +F  G+   
Sbjct: 610 VGVETDIVTYSTLLDGYFKNGRINDGLTLFREMQRKGVKPNTVTYGIMLAGLFRAGRTVA 669

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + +  G    +  Y I++  +C+      AI +   +        I   N+++N
Sbjct: 670 ARKKFHEMIESGTTVTVSIYGIILGGLCRNNCADEAIILFQKLGTMNVKFSITILNTMIN 729

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K  + ++A  +   + + G+ PN  TY  ++ +L   G  +  + +   M ++   P
Sbjct: 730 AMYKVQRKEEAKELFATISASGLLPNESTYGVMIINLLKDGAVEDANNMFSSMEKSGIVP 789

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
                N +I  L + G + +A N  +++  K    +  T + +L    ++G  +E ++LL
Sbjct: 790 GSRLLNRIIRMLLEKGEIAKAGNYLSKVDGKRILLEASTTSLMLSLFSRKGKYHEDMKLL 849


>gi|147846788|emb|CAN80625.1| hypothetical protein VITISV_032617 [Vitis vinifera]
          Length = 733

 Score =  200 bits (508), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 237/488 (48%), Gaps = 38/488 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E   +    ++ ++   GKL +A + + +M +    PD   C   I  L+  +R++KA 
Sbjct: 165 IERRPEAFGYVMVSYSRAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAV 224

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI--------- 223
           + L+ M +    P+ ITYN ++ G C   ++  A  L+ EM   GC PD I         
Sbjct: 225 RFLERMQIVEIXPNVITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFL 284

Query: 224 ---------------------------TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
                                      TYNT +  +  +G   +A+ F ++   +     
Sbjct: 285 CKEKRIKELRLLMEKMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVD 344

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
            + Y+ ++   C++  + +A E++++M  +GC PD+VTY S++N  C++ K D A  ++ 
Sbjct: 345 KVGYSAIVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLR 404

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +   G +PN+++Y  LL+ L   G      +++++  E    P   TY++L++G  + G
Sbjct: 405 QMYKHGCKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREG 464

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
               A +   +M+ K   P  V  N ++ +LC+E  ++EA + +     + C+  ++ + 
Sbjct: 465 KSSEACDLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFT 524

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           T+I G  +K  +E A+ L   M  +   PD +T+ T+I    +  ++EEA  L  ++ + 
Sbjct: 525 TVIHGFCQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRV 584

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       YR VIH  C+  +V+  +++LE M+S   +   T ++ +++K+   G  E+A
Sbjct: 585 GWIPTPVTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQA 642

Query: 557 YKLWQKLI 564
           YKL  K++
Sbjct: 643 YKLLGKVL 650



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 127/440 (28%), Positives = 218/440 (49%), Gaps = 3/440 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++ +C   +L DA +LI  M  +   PD      ++  L +  RI++   +++ M
Sbjct: 241 TYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKM 300

Query: 179 VM-SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +  S  +PD +TYN  V  L K G    A+  L E        D + Y+ I+ +    G+
Sbjct: 301 LKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGR 360

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A     +   KGC P ++TYT +I  +C++  + +A ++L  M   GC P+ V+Y +
Sbjct: 361 MDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSYTA 420

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK G   +A  ++N        PN+ITY+ L+H     G       ++  M +  
Sbjct: 421 LLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIKKG 480

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             PT    N+LI  LC+   VD A     Q ++  C  ++V + TV+   C++  L  AL
Sbjct: 481 FFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGFCQKDDLEAAL 540

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            LL  +  S+  P ++TY T+ID L KKG +E+A  L  +M+  G  P  +T+RT+I  +
Sbjct: 541 SLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTPVTYRTVIHQY 600

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           CR  +VE+ + LL+++  R      +AY  VI  LC    ++ A ++L  ++ +  K D 
Sbjct: 601 CRMGRVEDLLKLLEKMLSRQEC--RTAYNQVIEKLCSFGNLEQAYKLLGKVLRTASKIDA 658

Query: 538 TVFSTIVKKVADDGMTEEAY 557
                +++     G+   +Y
Sbjct: 659 NTCHMLIESYLSKGIPLMSY 678



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 90/380 (23%), Positives = 187/380 (49%), Gaps = 12/380 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+ +FC  G++  A ++++ M  +  IPD     ++I GL +  ++++A K+L+ M   G
Sbjct: 351 IVHSFCREGRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHG 410

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+T++Y  ++ GLCK G    A  +++        P+ ITY+ ++      GK  +A 
Sbjct: 411 CKPNTVSYTALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEAC 470

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++ ++KG  P  +   +LI+ +C++  +  A   ++     GC+ ++V + ++++  
Sbjct: 471 DLVREMIKKGFFPTPVEINLLIQSLCQEEKVDEAKRFMEQCLNNGCAVNVVNFTTVIHGF 530

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C++   + A+ +++++      P+ +TY T++ +LG +G  +   K+   M      PT 
Sbjct: 531 CQKDDLEAALSLLDDMYLSNKHPDVVTYTTIIDALGKKGRIEEATKLAMKMLRVGWIPTP 590

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY  +I+  C+ G V+  +    +M+S+  Q     YN V+  LC  G L +A +LL  
Sbjct: 591 VTYRTVIHQYCRMGRVEDLLKLLEKMLSR--QECRTAYNQVIEKLCSFGNLEQAYKLLGK 648

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD-----DITHRTLIWGF 477
           +  ++      T + LI+    KG    +  +  +M    + PD      ++ + ++ G 
Sbjct: 649 VLRTASKIDANTCHMLIESYLSKGIPLMSYNVACRMFNRNLIPDLKLCEKVSKKLMLEG- 707

Query: 478 CRADQVEEAVDLLKEIGKRG 497
               + EEA  L+    +RG
Sbjct: 708 ----KSEEADKLILRFVERG 723



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 164/364 (45%), Gaps = 41/364 (11%)

Query: 244 FWKD-QLRKGCPPYLITYTILIEQVCKQC-GIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +W D Q R    P +    + I    K C G  R + ++    IE   P+   Y  +V++
Sbjct: 122 YWADRQWRYRHDPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIER-RPEAFGY-VMVSY 179

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
           S + GK  +A+  +  +   G+EP+    NT +H L      D   + L+ M      P 
Sbjct: 180 S-RAGKLRNAMRXLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPN 238

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TYN LI G C    ++ A     +M  K C PD ++Y TV+G LCKE  + E   L+ 
Sbjct: 239 VITYNCLIKGYCDLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLME 298

Query: 422 -LLNGSSCSPCLITYNTLIDGLAK-----------------------------------K 445
            +L  S+  P  +TYNT +  L+K                                   +
Sbjct: 299 KMLKDSNLLPDQVTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCRE 358

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G M+KA  +  +M   G  PD +T+ ++I G C+  +V++A  +L+++ K G K    +Y
Sbjct: 359 GRMDKAKEIVNEMFSKGCIPDVVTYTSVINGLCQERKVDQAKKMLRQMYKHGCKPNTVSY 418

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +++GLCK+     A +++ +     + P+   +S ++     +G + EA  L +++I+
Sbjct: 419 TALLNGLCKNGNSLEAREMMNMSEEXWWIPNAITYSVLMHGFRREGKSSEACDLVREMIK 478

Query: 566 WKVF 569
              F
Sbjct: 479 KGFF 482



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 62/250 (24%), Positives = 108/250 (43%), Gaps = 10/250 (4%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIM--NEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           + I Y  +L  L          ++L +M        P  F Y ++     + G +  A+ 
Sbjct: 133 DPIVYYAMLEILSKTKLCQGAKRVLRLMAKRRIERRPEAFGYVMV--SYSRAGKLRNAMR 190

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               M     +PD+   NT +  L     L++A++ L  +      P +ITYN LI G  
Sbjct: 191 XLTMMQKAGIEPDLSICNTAIHVLVMGNRLDKAVRFLERMQIVEIXPNVITYNCLIKGYC 250

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
               +E A  L  +M   G SPD I++ T++   C+  +++E   L++++ K  N + + 
Sbjct: 251 DLHRLEDAXELIAEMPFKGCSPDKISYYTVMGFLCKEKRIKELRLLMEKMLKDSNLLPDQ 310

Query: 504 -AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y   +H L K    D A++ L      R++ D   +S IV     +G  ++A     K
Sbjct: 311 VTYNTFVHMLSKHGHGDEALEFLREAEERRFRVDKVGYSAIVHSFCREGRMDKA-----K 365

Query: 563 LIEWKVFEKG 572
            I  ++F KG
Sbjct: 366 EIVNEMFSKG 375


>gi|357139998|ref|XP_003571561.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 807

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 137/511 (26%), Positives = 237/511 (46%), Gaps = 43/511 (8%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTD-ASKLIDIMARRNQIPDFHFCINLIRGLI 163
           + +  GP V         IL + C R +  D A      + R+    D     +L+RGL 
Sbjct: 90  MSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVSSLLRGLC 149

Query: 164 RIDRIEKASKVL-QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV---SGCE 219
              R ++A  VL   M   G VPD I+Y+ ++  +C  G+ + A+ +L  M+V    GC 
Sbjct: 150 DAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDIL-RMAVKQGGGCP 208

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
            +V+ Y+T++  +F  GK  +A   + +  ++G PP ++TY  +I  +CK   + +A  +
Sbjct: 209 CNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGI 268

Query: 280 LDDMAIEGCSPDIVTYNSLVN-----------------------------------FSCK 304
           L  M   G  PD VTYN+L++                                   F CK
Sbjct: 269 LRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCK 328

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            G+ ++A    +++L++G + N I+Y+TLLH   + GC   +  + ++M      P    
Sbjct: 329 HGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHV 388

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           +NIL+NG  K G+V  A+  F  M  +   PD++TY  V+ A C+ G +++A+   + + 
Sbjct: 389 FNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMI 448

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P    Y  LI G    G + KA  L  ++   G+ P  ++  +LI   C+  +V 
Sbjct: 449 DKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVF 508

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  +   I + G K   + +  +I G C   K+  A +V + M+S   +PD   + T+V
Sbjct: 509 EAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLV 568

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
                +G  ++   L+++L+   V  K TT 
Sbjct: 569 NGCCKNGRIDDGLILFRELLHKGV--KPTTF 597



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 109/481 (22%), Positives = 230/481 (47%), Gaps = 35/481 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++      GK+ +A  L   M ++   P+     ++I  L +   ++KA  +L+ MV 
Sbjct: 215 STVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAVDKAQGILRQMVG 274

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PD +TYN ++ G    GQ + A+ +  EM+  G  P+ +T +T +  +  +G+ ++
Sbjct: 275 NGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIEE 334

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVC-------------------------------- 268
           A  F+   L KG    +I+Y+ L+                                    
Sbjct: 335 AREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILVN 394

Query: 269 --KQCGIAR-AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
              +CG+ R A+ + +DM   G +PD++TY ++++  C+ G  DDA+   N+++ +G+EP
Sbjct: 395 GYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVEP 454

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N   Y  L+    + G     ++++  +      P + ++  LIN LCK G V  A   F
Sbjct: 455 NFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRIF 514

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           + ++    + D+  + +++   C  G ++EA ++   +      P ++TY TL++G  K 
Sbjct: 515 DMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCKN 574

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G ++  ++L+ +++  G+ P   T+  ++ G   A +   A ++ +E+ + G  +    Y
Sbjct: 575 GRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPTY 634

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +++ GLC++   + AI V + + +   K D  + + ++ K+      EEA  L+  + +
Sbjct: 635 SILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIPD 694

Query: 566 W 566
           +
Sbjct: 695 Y 695



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 112/477 (23%), Positives = 205/477 (42%), Gaps = 35/477 (7%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  V+ D  T N ++  + + G+   A ++   M  R  IP+   C   +  L +  RIE
Sbjct: 274 GNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTFVAFLCKHGRIE 333

Query: 170 KA-----------------------------------SKVLQIMVMSGGVPDTITYNMMV 194
           +A                                   S +  +MV  G VP+   +N++V
Sbjct: 334 EAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGIVPNQHVFNILV 393

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            G  K G +R A+ + ++M   G  PDV+TY  ++      G    A+  +   + KG  
Sbjct: 394 NGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMDKFNHMIDKGVE 453

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P    Y  LI+  C    + +A E++ ++  +G  P I+++ SL+N  CK+G+  +A  +
Sbjct: 454 PNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQRI 513

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
            + ++  G + +   + +L+      G      ++ D M      P + TY  L+NG CK
Sbjct: 514 FDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGCCK 573

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G +D  +  F +++ K  +P   TY  +L  L   G    A ++   +  S  +  + T
Sbjct: 574 NGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTIPT 633

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y+ L+ GL +  C E+A+ ++ ++    +  D +    +I    +A + EEA  L   I 
Sbjct: 634 YSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFASIP 693

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
             G       Y +++  L K   V+ A  V  +M+ S   P     + IV+ + + G
Sbjct: 694 DYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKG 750



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 171/400 (42%), Gaps = 42/400 (10%)

Query: 206 AIALLDEMSVSG----CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           A+AL + MS         P V TY+ ++       +   A  F+   LR+G    +I  +
Sbjct: 83  AVALFNRMSTGTGPRVALPTVYTYSILIDCCCRARRLDLAFAFFGCLLRQGMKADVIVVS 142

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            L+  +C       A++VL     E GC PD ++Y++++   C  G+   A+ ++   + 
Sbjct: 143 SLLRGLCDAKRTDEAVDVLFHRMPELGCVPDAISYSTVLKSVCDDGRSQWALDILRMAVK 202

Query: 321 RG--MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           +G     N + Y+T++H L   G       +   M +    P V TYN +I+ LCK   V
Sbjct: 203 QGGGCPCNVVVYSTVVHGLFKEGKVGEACDLFHEMTQQGVPPNVVTYNSVIHALCKARAV 262

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVL---------------------------------- 404
           D+A     QMV    QPD VTYNT++                                  
Sbjct: 263 DKAQGILRQMVGNGVQPDNVTYNTLIHGYSTLGQWKQAVRMFKEMTSRGVIPNTVTCSTF 322

Query: 405 -GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
              LCK G + EA +    +        +I+Y+TL+ G A  GC+     L+  M+ +GI
Sbjct: 323 VAFLCKHGRIEEAREFFDSMLAKGHKLNIISYSTLLHGYATAGCLVDMSNLFNLMVRDGI 382

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P+      L+ G+ +   V EA+ + +++ KRG       Y  VIH  C+   +D A+ 
Sbjct: 383 VPNQHVFNILVNGYAKCGMVREAMFIFEDMQKRGLNPDVLTYLAVIHAFCRMGSMDDAMD 442

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
               MI    +P+  V+  +++     G   +A +L  ++
Sbjct: 443 KFNHMIDKGVEPNFAVYQCLIQGFCTHGDLVKAEELVYEI 482



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 73/298 (24%), Positives = 140/298 (46%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ + C  G++ +A ++ D++ R  +  D +   +LI G   I ++ +A +V   MV  G
Sbjct: 497 LINHLCKEGRVFEAQRIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVG 556

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TY  +V G CK G+I   + L  E+   G +P   TY  IL  +F  G+   A 
Sbjct: 557 IEPDIVTYGTLVNGCCKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAK 616

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +++ +  G    + TY+IL+  +C+      AI V   +       DIV  N +++  
Sbjct: 617 EMFQEMIESGIAVTIPTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKM 676

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K  + ++A  +  ++   G+ P   TY  ++ +L   G  +  + +  +M ++  SPT 
Sbjct: 677 FKARRREEAEGLFASIPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTS 736

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              N+++  L + G + +A     ++  K+   +  T + +L     +G   E L LL
Sbjct: 737 HFINVIVRTLLEKGEIVKAGIYMCRVDGKSILFEASTASMLLSLFSCKGKHREHLNLL 794



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 73/315 (23%), Positives = 146/315 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +      ++Q FC+ G L  A +L+  +  +   P      +LI  L +  R+ +A 
Sbjct: 452 VEPNFAVYQCLIQGFCTHGDLVKAEELVYEIRNKGLGPCILSFASLINHLCKEGRVFEAQ 511

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++  +++ +G   D   +  ++ G C  G++  A  + D M   G EPD++TY T++   
Sbjct: 512 RIFDMIIRTGEKADVNIFTSLIDGYCLIGKMSEAFRVHDAMVSVGIEPDIVTYGTLVNGC 571

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG+    +  +++ L KG  P   TY I+++ +      A A E+  +M   G +  I
Sbjct: 572 CKNGRIDDGLILFRELLHKGVKPTTFTYGIILDGLFHAGRTAAAKEMFQEMIESGIAVTI 631

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY+ L+   C+    ++A+ V   L +  ++ + +  N ++  +      +  + +   
Sbjct: 632 PTYSILLTGLCRNNCTEEAITVFQKLCAMNVKFDIVILNIMISKMFKARRREEAEGLFAS 691

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + +    PTV TY I++  L K G V+ A   F+ M+     P     N ++  L ++G 
Sbjct: 692 IPDYGLVPTVQTYTIMMENLIKEGSVEEAEGVFSVMLKSGLSPTSHFINVIVRTLLEKGE 751

Query: 413 LNEALQLLHLLNGSS 427
           + +A   +  ++G S
Sbjct: 752 IVKAGIYMCRVDGKS 766


>gi|357474081|ref|XP_003607325.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355508380|gb|AES89522.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 834

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 117/442 (26%), Positives = 229/442 (51%), Gaps = 3/442 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +C  G +  A +L D +     +PD      LI G  ++  +EKA ++   M + G
Sbjct: 331 LMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMG 390

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+    N ++ G  ++  +  A  L DE    G   +V+TYN +L+ + + GK  +A 
Sbjct: 391 IQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGI-TNVVTYNILLKWLGELGKVNEAC 449

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             W+  + KG  P L++Y  LI   CK+  + +A  +L  +   G  P+ VTY  L++  
Sbjct: 450 NLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGF 509

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPT 361
            K+G  + A +V   +++  + P   T+NT+++ LG  G   +  DK+ + + +   S +
Sbjct: 510 FKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTS 569

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + TYN +I+G  K G VD A+ ++ +M      PD++TY +++  LCK   +  AL++  
Sbjct: 570 I-TYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLIDGLCKSNKIGLALEMHS 628

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +        ++ Y+ LIDG  K   ME A   + ++++ G++P+ + + ++I GF   +
Sbjct: 629 DMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGLTPNTVVYNSMISGFIHLN 688

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            +E A++L +E+ K         Y  +I GL K  K+ +A+ +   M+S    PD  +++
Sbjct: 689 NMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYT 748

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
            ++  ++++G  E A K+ +++
Sbjct: 749 VLINGLSNNGQLENASKILKEM 770



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 227/461 (49%), Gaps = 1/461 (0%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           + G  +E D    + ++Q  C R  L  A +L+  M     +P       +I   ++   
Sbjct: 246 AKGRGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGN 305

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
             +A ++   MV  G   + I    ++ G C  G +  A+ L DE+   G  PDV+ ++ 
Sbjct: 306 FVEALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSV 365

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++      G  ++A   +      G  P +     L+E   +Q  +  A  + D+ A+E 
Sbjct: 366 LINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDE-AVEH 424

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              ++VTYN L+ +  + GK ++A  +   ++S+G+ P+ ++YN L+     +GC D   
Sbjct: 425 GITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAY 484

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            +L  + E    P   TY +LI+G  K G  +RA   F QM++ N  P   T+NTV+  L
Sbjct: 485 SMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGL 544

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            K G ++E    L+           ITYN++IDG  K+G ++ A++ Y +M E+GISPD 
Sbjct: 545 GKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDV 604

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           IT+ +LI G C+++++  A+++  ++  +G K+   AY  +I G CK   ++ A +    
Sbjct: 605 ITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTE 664

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++     P+  V+++++         E A  L Q++I+ KV
Sbjct: 665 LLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKV 705



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 213/481 (44%), Gaps = 38/481 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L     R  + DA +L D M  R    D +    ++R  ++  + E+  K  +    
Sbjct: 189 NNLLTAMVRRNMVCDARQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKG 248

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D   Y+++V  +C+R  +  A  LL EM   G  P   TY  ++      G F +
Sbjct: 249 RGLEVDAAAYSILVQAVCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVE 308

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    + +  G P  +I    L++  C    +  A+++ D++   G  PD+V ++ L+N
Sbjct: 309 ALRLKDEMVSVGLPMNVIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLIN 368

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G  + A  +   +   G++PN    N+LL     +   +    + D      H  
Sbjct: 369 GCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFD--EAVEHGI 426

Query: 361 T-VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           T V TYNIL+  L + G V+ A N + +MVSK   P +V+YN ++   CK+G +++A  +
Sbjct: 427 TNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSM 486

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +      P  +TY  LIDG  KKG  E+A V++ QMM   I+P D T  T+I G  +
Sbjct: 487 LKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGK 546

Query: 480 ADQVEEAVDLLKEIGKRG----NKMRNS----------------AYR------------- 506
             +V E  D L    K+G    +   NS                AYR             
Sbjct: 547 TGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVIT 606

Query: 507 --LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              +I GLCKS K+ +A+++   M     K D   +S ++         E A K + +L+
Sbjct: 607 YTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELL 666

Query: 565 E 565
           +
Sbjct: 667 D 667



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 104/399 (26%), Positives = 195/399 (48%), Gaps = 1/399 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L++  +R+++I  A +  + M+    VP     N ++  + +R  +  A  L DEM   G
Sbjct: 156 LLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQLYDEMVERG 215

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              D  T + ++R     GKF++   F+K+   +G       Y+IL++ VC++  +  A 
Sbjct: 216 IYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVCRRLDLNLAC 275

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           E+L +M   G  P   TY +++    KQG + +A+ + + ++S G+  N I   +L+   
Sbjct: 276 ELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVIVTRSLMKGY 335

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +   ++ D + E    P V  +++LING  K G +++A   + +M     QP++
Sbjct: 336 CVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRMKLMGIQPNV 395

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
              N++L    ++ +L  A  L         +  ++TYN L+  L + G + +A  L+ +
Sbjct: 396 FIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITN-VVTYNILLKWLGELGKVNEACNLWEK 454

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+  GI+P  +++  LI G C+   +++A  +LK I +RG K     Y L+I G  K   
Sbjct: 455 MVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLIDGFFKKGD 514

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
            + A  V E M+++   P D  F+T++  +   G   E 
Sbjct: 515 SERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSET 553



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 206/460 (44%), Gaps = 41/460 (8%)

Query: 123 ILQNFCSR-GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +L N CS+ G +  A +L   M      P+     +L+ G    + +E A  +    V  
Sbjct: 365 VLINGCSKVGDMEKAYELYTRMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAV-E 423

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
            G+ + +TYN+++  L + G++  A  L ++M   G  P +++YN ++      G   +A
Sbjct: 424 HGITNVVTYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKA 483

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
               K  L +G  P  +TYT+LI+   K+    RA  V + M     +P   T+N+++N 
Sbjct: 484 YSMLKSILERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVING 543

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             K G+  +    +NN + +G    SITYN+++      G  D+       M E+  SP 
Sbjct: 544 LGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPD 603

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL-- 419
           V TY  LI+GLCK   +  A+   + M  K  + D+V Y+ ++   CK   +  A +   
Sbjct: 604 VITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFT 663

Query: 420 ---------------------LHLLNGSSC-----------SPC-LITYNTLIDGLAKKG 446
                                +HL N  +             PC L  Y ++I GL K+G
Sbjct: 664 ELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEG 723

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA-- 504
            +  A+ LY +M+   I PD + +  LI G     Q+E A  +LKE+   GN +  S   
Sbjct: 724 KLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMD--GNNITPSVLV 781

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           Y ++I G  +   +  A ++ + M+     PDDT +  +V
Sbjct: 782 YNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILV 821



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 199/465 (42%), Gaps = 34/465 (7%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E+D +  N +L++F    K+TDA +    M   + +P      NL+  ++R + +  A +
Sbjct: 147 ESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDARQ 206

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   MV  G   D  T ++++    K G+         E    G E D   Y+ +++ + 
Sbjct: 207 LYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQAVC 266

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
                  A    K+    G  P   TYT +I    KQ     A+ + D+M   G   +++
Sbjct: 267 RRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMNVI 326

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
              SL+   C  G  + A+ + + ++  G+ P+ + ++ L++     G  +   ++   M
Sbjct: 327 VTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYTRM 386

Query: 354 NEASHSPTVFTYNILINGLCK-------YGLVDRAI------------------------ 382
                 P VF  N L+ G  +       YGL D A+                        
Sbjct: 387 KLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHGITNVVTYNILLKWLGELGKVN 446

Query: 383 ---NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
              N + +MVSK   P +V+YN ++   CK+G +++A  +L  +      P  +TY  LI
Sbjct: 447 EACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILERGLKPNAVTYTLLI 506

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DG  KKG  E+A V++ QMM   I+P D T  T+I G  +  +V E  D L    K+G  
Sbjct: 507 DGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRVSETQDKLNNFIKQGFV 566

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
             +  Y  +I G  K   VD A+     M  S   PD   +++++
Sbjct: 567 STSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSLI 611



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 191/396 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+     GK+ +A  L + M  +   P      NLI G  +   ++KA  +L+ +
Sbjct: 431 TYNILLKWLGELGKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSI 490

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+ +TY +++ G  K+G    A  + ++M  +   P   T+NT++  +   G+ 
Sbjct: 491 LERGLKPNAVTYTLLIDGFFKKGDSERAFVVFEQMMAANIAPTDHTFNTVINGLGKTGRV 550

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +      + +++G     ITY  +I+   K+  +  A+    +M   G SPD++TY SL
Sbjct: 551 SETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYREMCESGISPDVITYTSL 610

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK  K   A+ + +++  +GM+ + + Y+ L+         ++  K    + +   
Sbjct: 611 IDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESASKFFTELLDIGL 670

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P    YN +I+G      ++ A+N   +M+      D+  Y +++G L KEG L+ AL 
Sbjct: 671 TPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGLLKEGKLSLALD 730

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P ++ Y  LI+GL+  G +E A  +  +M  N I+P  + +  LI G  
Sbjct: 731 LYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSVLVYNILIAGNF 790

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           R   ++EA  L  E+  +G    ++ Y ++++G  K
Sbjct: 791 REGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLK 826



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 74/310 (23%), Positives = 142/310 (45%), Gaps = 9/310 (2%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           + T N ++      G++++    ++   ++  +       ++I G  +   ++ A    +
Sbjct: 534 DHTFNTVINGLGKTGRVSETQDKLNNFIKQGFVSTSITYNSIIDGFFKEGAVDSALLAYR 593

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M  SG  PD ITY  ++ GLCK  +I  A+ +  +M   G + DV+ Y+ ++       
Sbjct: 594 EMCESGISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMH 653

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
             + A  F+ + L  G  P  + Y  +I        +  A+ +  +M       D+  Y 
Sbjct: 654 DMESASKFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYT 713

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           S++    K+GK   A+ + + +LS+ + P+ + Y  L++ L + G  +   KIL  M+  
Sbjct: 714 SIIGGLLKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGN 773

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           + +P+V  YNILI G  + G +  A    ++M+ K   PD  TY+          ++N  
Sbjct: 774 NITPSVLVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDI---------LVNGK 824

Query: 417 LQLLHLLNGS 426
           L++ H L GS
Sbjct: 825 LKVSHTLGGS 834



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 83/350 (23%), Positives = 161/350 (46%), Gaps = 3/350 (0%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G E D   +N +L++     K   A+  ++  L     P++     L+  + ++  +  A
Sbjct: 145 GFESDSRVFNYLLKSFVRVNKITDAVECFRTMLEHDLVPWVPIMNNLLTAMVRRNMVCDA 204

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            ++ D+M   G   D  T + ++    K+GK+++          RG+E ++  Y+ L+ +
Sbjct: 205 RQLYDEMVERGIYGDCYTLHVVMRACMKEGKFEEVEKFFKEAKGRGLEVDAAAYSILVQA 264

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           +  R   +   ++L  M E    P+  TY  +I    K G    A+   ++MVS     +
Sbjct: 265 VCRRLDLNLACELLKEMREFGWVPSKGTYTAVIVACVKQGNFVEALRLKDEMVSVGLPMN 324

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           ++   +++   C  G +N ALQL   +      P ++ ++ LI+G +K G MEKA  LY 
Sbjct: 325 VIVTRSLMKGYCVLGDVNLALQLFDEVVEGGVVPDVVIFSVLINGCSKVGDMEKAYELYT 384

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKS 515
           +M   GI P+     +L+ GF   + +E A  L  E  + G  + N   Y +++  L + 
Sbjct: 385 RMKLMGIQPNVFIVNSLLEGFHEQNLLEHAYGLFDEAVEHG--ITNVVTYNILLKWLGEL 442

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            KV+ A  + E M+S    P    ++ ++      G  ++AY + + ++E
Sbjct: 443 GKVNEACNLWEKMVSKGITPSLVSYNNLILGHCKKGCMDKAYSMLKSILE 492



 Score = 88.6 bits (218), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 56/233 (24%), Positives = 107/233 (45%), Gaps = 7/233 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T   ++   C   K+  A ++   M  +    D      LI G  ++  +E AS
Sbjct: 600 ISPDVITYTSLIDGLCKSNKIGLALEMHSDMKYKGMKLDVVAYSALIDGFCKMHDMESAS 659

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K    ++  G  P+T+ YN M+ G      + +A+ L  EM  +    D+  Y +I+  +
Sbjct: 660 KFFTELLDIGLTPNTVVYNSMISGFIHLNNMEAALNLHQEMIKNKVPCDLQVYTSIIGGL 719

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK   A+  + + L K   P ++ YT+LI  +     +  A ++L +M     +P +
Sbjct: 720 LKEGKLSLALDLYSEMLSKDIVPDIVMYTVLINGLSNNGQLENASKILKEMDGNNITPSV 779

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL-------HSLG 338
           + YN L+  + ++G   +A  + + +L +G+ P+  TY+ L+       H+LG
Sbjct: 780 LVYNILIAGNFREGNLQEAFRLHDEMLDKGLVPDDTTYDILVNGKLKVSHTLG 832


>gi|297734659|emb|CBI16710.3| unnamed protein product [Vitis vinifera]
          Length = 569

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/413 (29%), Positives = 209/413 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC  G + +A KL D +      P+      L+ G +++  I++A+ + + M
Sbjct: 128 TFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYEEM 187

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD IT+N++V G  K G+      LL ++SV G  PD   ++  +  +   G+ 
Sbjct: 188 RKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAGRL 247

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+ F  D L KG  P +I +  +I    +     +A E    M   G +P   T +SL
Sbjct: 248 DEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSL 307

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +      G+  +A  +I  ++ +G+  N++ +  LL     RG       +   M     
Sbjct: 308 LMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGI 367

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V  ++  I+GL K GLV+ A N F +M+ K   P+   YN+++   CK G LNEAL+
Sbjct: 368 FPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEALK 427

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L  ++      P + T N +I GL K+G M  A+ ++  M + G+SPD IT+ TLI G+C
Sbjct: 428 LEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGLSPDIITYNTLINGYC 487

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +A  +  A +L+  +   G+    + Y + IHG C S++++ A+ +L+ ++S+
Sbjct: 488 KAFDMVNADNLVNRMYASGSNPDLTTYNIRIHGFCSSRRMNRAVLMLDELVSA 540



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 107/423 (25%), Positives = 206/423 (48%), Gaps = 3/423 (0%)

Query: 140 IDIMARRNQI---PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGG 196
           ++I+ R  ++   P       L + L+R+       K+ + ++  G  P   T++ ++ G
Sbjct: 6   LEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIILG 65

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
            C++G I    +LL  M    CEP+   YN ++      G+   A+ ++   + +GC P 
Sbjct: 66  FCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNPT 125

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           ++T+  +I   CK+  +  A ++ D +   G SP+ + YN+L+N   K  + D A ++  
Sbjct: 126 VVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLYE 185

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +  +G+ P+ IT+N L+      G  +  D++L  ++     P    ++I ++GLC  G
Sbjct: 186 EMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWAG 245

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +D A+     M+ K   P I+ +N+V+ A  + G+ ++A +   L+     +P   T +
Sbjct: 246 RLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTCS 305

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           +L+ GL+  G +++A  L GQM+E G+S +++    L+  F +   V  A  L  E+ +R
Sbjct: 306 SLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMERR 365

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G      A+   I GL K   V+ A  V   M+     P++  +++++      G   EA
Sbjct: 366 GIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSLICGFCKCGKLNEA 425

Query: 557 YKL 559
            KL
Sbjct: 426 LKL 428



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 110/431 (25%), Positives = 205/431 (47%), Gaps = 10/431 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCINL--IRGLIRIDRIEKASK 173
           T + I+  FC +G +     L+ +M + +  P+   ++  IN   IRG     R   A  
Sbjct: 58  TFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRG-----RTSDALA 112

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
              +M+  G  P  +T+N ++   CK G +  A  L D +   G  P+ I YNT++    
Sbjct: 113 WFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYV 172

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              +  QA   +++  +KG  P  IT+ IL+    K         +L D+++ G  PD  
Sbjct: 173 KMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRS 232

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            ++  V+  C  G+ D+A+  + ++L +G+ P+ I +N+++ +    G  D   +   +M
Sbjct: 233 LFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLM 292

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                +P+  T + L+ GL   G +  A     QM+ K    + + +  +L    K G +
Sbjct: 293 VHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDV 352

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
             A  L   +      P ++ ++  IDGL+K+G +E+A  ++ +M+  G+ P++  + +L
Sbjct: 353 VGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLRKGLIPNNFAYNSL 412

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I GFC+  ++ EA+ L K +  RG         ++I GLCK  ++  AI V   M  +  
Sbjct: 413 ICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQGRMRSAINVFMDMHQTGL 472

Query: 534 KPDDTVFSTIV 544
            PD   ++T++
Sbjct: 473 SPDIITYNTLI 483



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 195/433 (45%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G   +  KL   + RR   P  +    +I G  R   I     +L +M      P+   Y
Sbjct: 35  GDYGNVWKLFKDVIRRGPQPCKYTFSGIILGFCRKGCIHLGESLLHLMPKFHCEPNAFAY 94

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N+++   C RG+   A+A  + M   GC P V+T+NT++      G   +A   +     
Sbjct: 95  NIVINACCIRGRTSDALAWFNLMIERGCNPTVVTFNTVINAFCKEGNVVEARKLFDGLKE 154

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P  I Y  L+    K   I +A  + ++M  +G +PD +T+N LV+   K G+ +D
Sbjct: 155 MGFSPNAIMYNTLMNGYVKMREIDQANMLYEEMRKKGIAPDGITFNILVSGHYKYGREED 214

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
              ++ ++   G+ P+   ++  +  L   G  D   + L  M E   SP++  +N +I 
Sbjct: 215 GDRLLKDISVLGLLPDRSLFDISVSGLCWAGRLDEAMEFLMDMLEKGLSPSIIAFNSVIA 274

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
              + GL D+A  ++  MV     P   T +++L  L   G L EA +L+  +     S 
Sbjct: 275 AYSQAGLEDKAFEAYKLMVHFGLTPSPSTCSSLLMGLSINGRLQEATELIGQMIEKGLSV 334

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             + +  L+D   K+G +  A  L+G+M   GI PD +     I G  +   VEEA ++ 
Sbjct: 335 NNMAFTVLLDKFFKRGDVVGAQSLWGEMERRGIFPDVVAFSAFIDGLSKQGLVEEAYNVF 394

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+ ++G    N AY  +I G CK  K++ A+++ ++M      PD    + I+  +   
Sbjct: 395 LEMLRKGLIPNNFAYNSLICGFCKCGKLNEALKLEKVMRHRGLLPDIFTTNMIIGGLCKQ 454

Query: 551 GMTEEAYKLWQKL 563
           G    A  ++  +
Sbjct: 455 GRMRSAINVFMDM 467



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 86/300 (28%), Positives = 154/300 (51%)

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
           +A+E+L  M   G  P       L     + G Y +   +  +++ RG +P   T++ ++
Sbjct: 4   QALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGII 63

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                +GC    + +L +M +    P  F YNI+IN  C  G    A+  FN M+ + C 
Sbjct: 64  LGFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCN 123

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P +VT+NTV+ A CKEG + EA +L   L     SP  I YNTL++G  K   +++A +L
Sbjct: 124 PTVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANML 183

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y +M + GI+PD IT   L+ G  +  + E+   LLK+I   G     S + + + GLC 
Sbjct: 184 YEEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCW 243

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           + ++D A++ L  M+     P    F++++   +  G+ ++A++ ++ ++ + +    +T
Sbjct: 244 AGRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPST 303



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 97/395 (24%), Positives = 176/395 (44%), Gaps = 35/395 (8%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A+ +L  M   G  P       + + +   G +      +KD +R+G  P   T++ +I 
Sbjct: 5   ALEILGRMREVGVRPSASGVAILFKLLLRVGDYGNVWKLFKDVIRRGPQPCKYTFSGIIL 64

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             C++  I     +L  M    C P+   YN ++N  C +G+  DA+   N ++ RG  P
Sbjct: 65  GFCRKGCIHLGESLLHLMPKFHCEPNAFAYNIVINACCIRGRTSDALAWFNLMIERGCNP 124

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
             +T+NT++++    G      K+ D + E   SP    YN L+NG  K   +D+A   +
Sbjct: 125 TVVTFNTVINAFCKEGNVVEARKLFDGLKEMGFSPNAIMYNTLMNGYVKMREIDQANMLY 184

Query: 386 NQMVSKNCQPDIVTYN----------------------TVLG-------------ALCKE 410
            +M  K   PD +T+N                      +VLG              LC  
Sbjct: 185 EEMRKKGIAPDGITFNILVSGHYKYGREEDGDRLLKDISVLGLLPDRSLFDISVSGLCWA 244

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G L+EA++ L  +     SP +I +N++I   ++ G  +KA   Y  M+  G++P   T 
Sbjct: 245 GRLDEAMEFLMDMLEKGLSPSIIAFNSVIAAYSQAGLEDKAFEAYKLMVHFGLTPSPSTC 304

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            +L+ G     +++EA +L+ ++ ++G  + N A+ +++    K   V  A  +   M  
Sbjct: 305 SSLLMGLSINGRLQEATELIGQMIEKGLSVNNMAFTVLLDKFFKRGDVVGAQSLWGEMER 364

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               PD   FS  +  ++  G+ EEAY ++ +++ 
Sbjct: 365 RGIFPDVVAFSAFIDGLSKQGLVEEAYNVFLEMLR 399


>gi|357438771|ref|XP_003589662.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478710|gb|AES59913.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 988

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 121/430 (28%), Positives = 213/430 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++     +G+   A +LI+ M+        H    LIRG  + +  E+A+ + + M+ 
Sbjct: 246 NVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLG 305

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +P  +TYN ++  LC+ G++  A   LD M      PD+++YNT++      G F +
Sbjct: 306 RGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAE 365

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  + +   K   P ++TY  LI+  C+   +  A  + DDM   G  PD+VT+  LV 
Sbjct: 366 ALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVR 425

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ G    A  + + +LSRG++P+ I Y T +      G       + + M      P
Sbjct: 426 GFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPP 485

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TYN+LINGLCK G  D A     +M  +   PD VTY +++ A    G+L +A ++ 
Sbjct: 486 DLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVF 545

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++TY  LI   A +G ++ A   + +M + G+SP+ IT+  LI+G C+ 
Sbjct: 546 SDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKE 605

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           + ++ A +L  E+  +G       Y ++I+     +    A+++ + M+    KPD    
Sbjct: 606 NMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTH 665

Query: 541 STIVKKVADD 550
           S ++K ++ D
Sbjct: 666 SALMKHLSKD 675



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 106/356 (29%), Positives = 178/356 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+ + C  G+++DA + +D+M   + +PD      LI G  R+    +A  +   +
Sbjct: 314 TYNTIMYSLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSEL 373

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                VP  +TYN ++ G C+ G +  A  + D+M   G  PDV+T+  ++R     G  
Sbjct: 374 RSKNLVPSVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNL 433

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   + + L +G  P  I YT  I    K    ++A  + ++M  EG  PD++TYN L
Sbjct: 434 PMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVL 493

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G +DDA  ++  +   G+ P+ +TY +++H+    G     +++   M +   
Sbjct: 494 INGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGI 553

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P+V TY +LI+     G +D A   F++M  K   P+++TYN ++  LCKE M++ A  
Sbjct: 554 HPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYN 613

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           L   +     SP   TY  LI+  +     + A+ LY  M++  I PD  TH  L+
Sbjct: 614 LFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALM 669



 Score =  191 bits (485), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 110/396 (27%), Positives = 205/396 (51%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +A +VL +M M G  P+ ++YN++V GL  +G+   A  L+++MS+ G +    TYN 
Sbjct: 223 VGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLGLKVSAHTYNP 282

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++R       F++A    ++ L +G  P ++TY  ++  +C+   ++ A   LD M  E 
Sbjct: 283 LIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDARRYLDVMVNED 342

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD+V+YN+L+    + G + +A+L+ + L S+ + P+ +TYNTL+      G  D   
Sbjct: 343 LMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGGCRTGNLDIAK 402

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            + D M +    P V T+ IL+ G C+ G +  A   F++M+S+  +PD + Y T +   
Sbjct: 403 GMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGE 462

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            K G  ++A  +   +      P LITYN LI+GL K G  + A  L  +M   GI PD 
Sbjct: 463 LKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDH 522

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+ ++I     +  + +A ++  ++ K+G       Y ++IH      ++D A +  + 
Sbjct: 523 VTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDE 582

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           M      P+   ++ ++  +  + M + AY L+ ++
Sbjct: 583 MQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEM 618



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 110/451 (24%), Positives = 215/451 (47%), Gaps = 2/451 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N ++ + C  G++  A +++D+M      P D  + + L+ GL      ++A ++++ 
Sbjct: 209 TFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNV-LVNGLSGKGEFDRAKELIEQ 267

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M M G      TYN ++ G CK+     A  L  EM   G  P V+TYNTI+ ++   G+
Sbjct: 268 MSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGR 327

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A  +    + +   P L++Y  LI    +    A A+ +  ++  +   P +VTYN+
Sbjct: 328 VSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNT 387

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C+ G  D A  + ++++  G+ P+ +T+  L+      G      ++ D M    
Sbjct: 388 LIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRG 447

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P    Y   I G  K G   +A     +M ++   PD++TYN ++  LCK G  ++A 
Sbjct: 448 LKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDAN 507

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L+  +      P  +TY ++I      G + KA  ++  M++ GI P  +T+  LI  +
Sbjct: 508 ELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSY 567

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
               +++ A     E+  +G       Y  +I+GLCK   +D+A  +   M S    P+ 
Sbjct: 568 AVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGVSPNK 627

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             ++ ++ + ++    ++A KL++ +++ ++
Sbjct: 628 YTYTILINENSNLQYWQDALKLYKDMLDREI 658



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 190/373 (50%)

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           ++++    K+  +   + +  +M  +G  PDV   N +L+ + D     +    +   ++
Sbjct: 141 DLLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIK 200

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
               P ++T+  +++  CK+  + RA+EVLD M + GC P+ V+YN LVN    +G++D 
Sbjct: 201 CQIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDR 260

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  +I  +   G++ ++ TYN L+     +  ++  + +   M      PTV TYN ++ 
Sbjct: 261 AKELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMY 320

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
            LC+ G V  A    + MV+++  PD+V+YNT++    + G   EAL L   L   +  P
Sbjct: 321 SLCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVP 380

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            ++TYNTLIDG  + G ++ A  +   M+++G+ PD +T   L+ GFC+   +  A +L 
Sbjct: 381 SVVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELF 440

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+  RG K    AY   I G  K      A  + E M +  + PD   ++ ++  +   
Sbjct: 441 DEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKL 500

Query: 551 GMTEEAYKLWQKL 563
           G  ++A +L QK+
Sbjct: 501 GNFDDANELVQKM 513



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 102/398 (25%), Positives = 192/398 (48%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +EK   V   MV +G +PD    N ++  L  +  +     +   M      P ++T+NT
Sbjct: 153 LEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKCQIRPTIVTFNT 212

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++ +    G+  +A+         GC P  ++Y +L+  +  +    RA E+++ M++ G
Sbjct: 213 MMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRAKELIEQMSMLG 272

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
                 TYN L+   CK+  +++A  +   +L RG  P  +TYNT+++SL   G      
Sbjct: 273 LKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYSLCRLGRVSDAR 332

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           + LD+M      P + +YN LI G  + G    A+  F+++ SKN  P +VTYNT++   
Sbjct: 333 RYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPSVVTYNTLIDGG 392

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C+ G L+ A  +   +      P ++T+  L+ G  + G +  A  L+ +M+  G+ PD 
Sbjct: 393 CRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDC 452

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           I + T I G  +     +A  + +E+   G       Y ++I+GLCK    D A ++++ 
Sbjct: 453 IAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQK 512

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           M      PD   +++I+      G+  +A +++  +++
Sbjct: 513 MRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLK 550



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 80/259 (30%), Positives = 129/259 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +++ FC  G L  A +L D M  R   PD       I G +++    KA  + 
Sbjct: 416 DVVTFTILVRGFCQMGNLPMAKELFDEMLSRGLKPDCIAYTTRIVGELKLGNPSKAFGMK 475

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD ITYN+++ GLCK G    A  L+ +M + G  PD +TY +I+     +
Sbjct: 476 EEMKAEGFPPDLITYNVLINGLCKLGNFDDANELVQKMRLEGIVPDHVTYTSIIHAHLIS 535

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++A   + D L+KG  P ++TYT+LI     +  +  A +  D+M  +G SP+++TY
Sbjct: 536 GLLRKAEEVFSDMLKKGIHPSVVTYTVLIHSYAVRGRLDFAKKYFDEMQDKGVSPNVITY 595

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+   CK+   D A  +   + S+G+ PN  TY  L++   +   W    K+   M +
Sbjct: 596 NALIYGLCKENMMDVAYNLFAEMESKGVSPNKYTYTILINENSNLQYWQDALKLYKDMLD 655

Query: 356 ASHSPTVFTYNILINGLCK 374
               P   T++ L+  L K
Sbjct: 656 REIKPDSCTHSALMKHLSK 674



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 86/304 (28%), Positives = 136/304 (44%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G L  A  + D M +    PD      L+RG  ++  +  A ++   M
Sbjct: 384 TYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFDEM 443

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD I Y   + G  K G    A  + +EM   G  PD+ITYN ++  +   G F
Sbjct: 444 LSRGLKPDCIAYTTRIVGELKLGNPSKAFGMKEEMKAEGFPPDLITYNVLINGLCKLGNF 503

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A    +    +G  P  +TYT +I        + +A EV  DM  +G  P +VTY  L
Sbjct: 504 DDANELVQKMRLEGIVPDHVTYTSIIHAHLISGLLRKAEEVFSDMLKKGIHPSVVTYTVL 563

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++    +G+ D A    + +  +G+ PN ITYN L++ L      D    +   M     
Sbjct: 564 IHSYAVRGRLDFAKKYFDEMQDKGVSPNVITYNALIYGLCKENMMDVAYNLFAEMESKGV 623

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP  +TY ILIN          A+  +  M+ +  +PD  T++ ++  L K+  L   L+
Sbjct: 624 SPNKYTYTILINENSNLQYWQDALKLYKDMLDREIKPDSCTHSALMKHLSKDYKLLAVLR 683

Query: 419 LLHL 422
           L +L
Sbjct: 684 LENL 687



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 139/303 (45%)

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           +LI+   K+  + + + V   M   G  PD+   N ++     +   ++   V + ++  
Sbjct: 142 LLIQVFAKKLILEKCLMVFYKMVNNGLLPDVRNCNRVLKLLKDKSMVNEVEEVYSVMIKC 201

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            + P  +T+NT++ S    G      ++LD+M      P   +YN+L+NGL   G  DRA
Sbjct: 202 QIRPTIVTFNTMMDSRCKEGEVGRAVEVLDVMRMFGCDPNDVSYNVLVNGLSGKGEFDRA 261

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
                QM     +    TYN ++   CK+ M  EA  L   + G    P ++TYNT++  
Sbjct: 262 KELIEQMSMLGLKVSAHTYNPLIRGFCKKEMFEEANDLRREMLGRGALPTVVTYNTIMYS 321

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L + G +  A      M+   + PD +++ TLI+G+ R     EA+ L  E+  +     
Sbjct: 322 LCRLGRVSDARRYLDVMVNEDLMPDLVSYNTLIYGYSRLGNFAEALLLFSELRSKNLVPS 381

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y  +I G C++  +D+A  + + MI     PD   F+ +V+     G    A +L+ 
Sbjct: 382 VVTYNTLIDGGCRTGNLDIAKGMKDDMIKHGLCPDVVTFTILVRGFCQMGNLPMAKELFD 441

Query: 562 KLI 564
           +++
Sbjct: 442 EML 444


>gi|15219046|ref|NP_175671.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75207557|sp|Q9SSR4.1|PPR77_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g52620
 gi|5903044|gb|AAD55603.1|AC008016_13 Contains 3 PF|01535 DUF domains [Arabidopsis thaliana]
 gi|332194709|gb|AEE32830.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 819

 Score =  199 bits (507), Expect = 2e-48,   Method: Compositional matrix adjust.
 Identities = 131/459 (28%), Positives = 218/459 (47%), Gaps = 36/459 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C+ GK+    KLI+    +  IP+  F   +I G  ++  IE A  V + + + G
Sbjct: 211 LVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKG 270

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG------------------------- 217
            +P   T+  M+ G CK G   ++  LL E+   G                         
Sbjct: 271 FMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPA 330

Query: 218 ----------CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
                     C+PDV TYN ++  +   GK + A+GF  +  +KG  P  ++Y  LI+  
Sbjct: 331 ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAY 390

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CK      A ++L  MA  GC PDIVTY  L++     G  DDAV +   L+ RG+ P++
Sbjct: 391 CKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA 450

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
             YN L+  L   G +     +   M + +  P  + Y  LI+G  + G  D A   F+ 
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSL 510

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
            V K  + D+V +N ++   C+ GML+EAL  ++ +N     P   TY+T+IDG  K+  
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           M  A+ ++  M +N   P+ +T+ +LI GFC     + A +  KE+  R        Y  
Sbjct: 571 MATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNVVTYTT 630

Query: 508 VIHGLCK-SKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           +I  L K S  ++ A+   ELM++++  P++  F+ +++
Sbjct: 631 LIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQ 669



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 211/445 (47%), Gaps = 5/445 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARR-NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +L       +L DA K+ D M  R + + ++  CI L++G+    ++E   K+++   
Sbjct: 174 NSLLSLLVKSRRLGDARKVYDEMCDRGDSVDNYSTCI-LVKGMCNEGKVEVGRKLIEGRW 232

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G +P+ + YN ++GG CK G I +A  +  E+ + G  P + T+ T++      G F 
Sbjct: 233 GKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKELKLKGFMPTLETFGTMINGFCKEGDFV 292

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            +     +   +G    +     +I+   +        E +  +    C PD+ TYN L+
Sbjct: 293 ASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGYKVDPAESIGWIIANDCKPDVATYNILI 352

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  CK+GK + AV  ++    +G+ PN+++Y  L+ +      +D   K+L  M E    
Sbjct: 353 NRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAPLIQAYCKSKEYDIASKLLLQMAERGCK 412

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P + TY ILI+GL   G +D A+N   +++ +   PD   YN ++  LCK G    A  L
Sbjct: 413 PDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLL 472

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +   +  P    Y TLIDG  + G  ++A  ++   +E G+  D + H  +I GFCR
Sbjct: 473 FSEMLDRNILPDAYVYATLIDGFIRSGDFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCR 532

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           +  ++EA+  +  + +         Y  +I G  K + +  AI++   M  ++ KP+   
Sbjct: 533 SGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRYMEKNKCKPNVVT 592

Query: 540 FSTIVKKV---ADDGMTEEAYKLWQ 561
           +++++       D  M EE +K  Q
Sbjct: 593 YTSLINGFCCQGDFKMAEETFKEMQ 617



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 196/423 (46%), Gaps = 1/423 (0%)

Query: 123 ILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +L  +   G L+ A ++ D ++   + +PD   C +L+  L++  R+  A KV   M   
Sbjct: 140 VLHAYAESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDR 199

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   D  +  ++V G+C  G++     L++     GC P+++ YNTI+      G  + A
Sbjct: 200 GDSVDNYSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENA 259

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +K+   KG  P L T+  +I   CK+     +  +L ++   G    +   N++++ 
Sbjct: 260 YLVFKELKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDA 319

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             + G   D    I  +++   +P+  TYN L++ L   G  +     LD  ++    P 
Sbjct: 320 KYRHGYKVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPN 379

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             +Y  LI   CK    D A     QM  + C+PDIVTY  ++  L   G +++A+ +  
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L     SP    YN L+ GL K G    A +L+ +M++  I PD   + TLI GF R+ 
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSG 499

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
             +EA  +     ++G K+    +  +I G C+S  +D A+  +  M      PD   +S
Sbjct: 500 DFDEARKVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559

Query: 542 TIV 544
           TI+
Sbjct: 560 TII 562



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 105/431 (24%), Positives = 181/431 (41%), Gaps = 56/431 (12%)

Query: 102 DPSLPSSDGPFVENDEK----TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN 157
           DP+   S G  + ND K    T N ++   C  GK   A   +D  +++  IP+      
Sbjct: 328 DPA--ESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI+   +    + ASK+L  M   G  PD +TY +++ GL   G +  A+ +  ++   G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PD   YN ++  +   G+F  A   + + L +   P    Y  LI+   +      A 
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +V      +G   D+V +N+++   C+ G  D+A+  +N +    + P+  TY+T++   
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
             +       KI   M +    P V TY  LING C  G    A  +F +M  ++  P++
Sbjct: 566 VKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNV 625

Query: 398 VTYNTVLGALCKEG-MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK----------- 445
           VTY T++ +L KE   L +A+    L+  + C P  +T+N L+ G  KK           
Sbjct: 626 VTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDG 685

Query: 446 --------------------------------------GCMEKAMVLYGQMMENGISPDD 467
                                                 G ++ A +   +M++ G SPD 
Sbjct: 686 SNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDP 745

Query: 468 ITHRTLIWGFC 478
           ++   ++ GFC
Sbjct: 746 VSFAAILHGFC 756



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 177/368 (48%), Gaps = 1/368 (0%)

Query: 199 KRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           + G +  A+ + D +  +    PDVI  N++L  +  + +   A   + +   +G     
Sbjct: 146 ESGSLSKAVEIYDYVVELYDSVPDVIACNSLLSLLVKSRRLGDARKVYDEMCDRGDSVDN 205

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            +  IL++ +C +  +    ++++    +GC P+IV YN+++   CK G  ++A LV   
Sbjct: 206 YSTCILVKGMCNEGKVEVGRKLIEGRWGKGCIPNIVFYNTIIGGYCKLGDIENAYLVFKE 265

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           L  +G  P   T+ T+++     G + A D++L  + E     +V+  N +I+   ++G 
Sbjct: 266 LKLKGFMPTLETFGTMINGFCKEGDFVASDRLLSEVKERGLRVSVWFLNNIIDAKYRHGY 325

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
                 S   +++ +C+PD+ TYN ++  LCKEG    A+  L   +     P  ++Y  
Sbjct: 326 KVDPAESIGWIIANDCKPDVATYNILINRLCKEGKKEVAVGFLDEASKKGLIPNNLSYAP 385

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI    K    + A  L  QM E G  PD +T+  LI G   +  +++AV++  ++  RG
Sbjct: 386 LIQAYCKSKEYDIASKLLLQMAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                + Y +++ GLCK+ +   A  +   M+     PD  V++T++      G  +EA 
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505

Query: 558 KLWQKLIE 565
           K++   +E
Sbjct: 506 KVFSLSVE 513



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 131/314 (41%), Gaps = 15/314 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D    N ++   C  G+   A  L   M  RN +PD +    LI G IR    ++A 
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRNILPDAYVYATLIDGFIRSGDFDEAR 505

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KV  + V  G   D + +N M+ G C+ G +  A+A ++ M+     PD  TY+TI+   
Sbjct: 506 KVFSLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                   AI  ++   +  C P ++TYT LI   C Q     A E   +M +    P++
Sbjct: 566 VKQQDMATAIKIFRYMEKNKCKPNVVTYTSLINGFCCQGDFKMAEETFKEMQLRDLVPNV 625

Query: 293 VTYNSLVNFSCKQGK-YDDAVLVINNLLSRGMEPNSITYNTLLHSL-------------- 337
           VTY +L+    K+    + AV     +++    PN +T+N LL                 
Sbjct: 626 VTYTTLIRSLAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGKVLAEPDG 685

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            + G      +    M     S     YN  +  LC +G+V  A    ++MV K   PD 
Sbjct: 686 SNHGQSSLFSEFFHRMKSDGWSDHAAAYNSALVCLCVHGMVKTACMFQDKMVKKGFSPDP 745

Query: 398 VTYNTVLGALCKEG 411
           V++  +L   C  G
Sbjct: 746 VSFAAILHGFCVVG 759


>gi|255764587|gb|ACU33853.1| PPR1 protein [Capsicum annuum]
          Length = 577

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 110/398 (27%), Positives = 215/398 (54%), Gaps = 1/398 (0%)

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITY 225
           RI+ A  VL I + +G   + +T+N ++GGL    ++  A+ L  ++     CEP+ + Y
Sbjct: 112 RIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICEPNEVMY 171

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
            T++  +   G  ++ +   +   +    P + TY+I+I+ +CK   +  AI +L++M  
Sbjct: 172 GTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINLLNEMKQ 231

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +   P+I TYNSL++  CK G+++    +++ +++  + PN  T++ L+  L   G  + 
Sbjct: 232 KNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCKEGKVED 291

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
            D+++  M E    P + TY+ +++G C  G VDRA   FN +  K  +P+I +Y+ ++ 
Sbjct: 292 ADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSILIN 351

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             CK+  L +A+QL   ++     P  +TY+T++ GL + G +  A  ++ +M+  G +P
Sbjct: 352 GYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTP 411

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D   H TL++G+ +   VEEA+ L  ++ +       S Y +VI+GLCK+ +V  A  + 
Sbjct: 412 DICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIF 471

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           E + S    PD   ++ ++     +G+ +E   + +K+
Sbjct: 472 EKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKM 509



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/384 (27%), Positives = 189/384 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +E     ++     RG       L+ IM + N  PD      +I  L +   ++ A  
Sbjct: 165 EPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAIN 224

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L  M      P+  TYN ++ GLCK GQ      LL EM      P+V T++ ++  + 
Sbjct: 225 LLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLC 284

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK + A    +  + KG  P +ITY+ +++  C +  + RA  V + +  +G  P+I 
Sbjct: 285 KEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIF 344

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +Y+ L+N  CK+     A+ +   +  +G++P+++TY+T+LH L   G      KI D M
Sbjct: 345 SYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEM 404

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                +P +  ++ L+ G  KYGLV+ A+  F+++       +I  Y  V+  LCK   +
Sbjct: 405 LRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRV 464

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA  +   L      P + TYN +I G  ++G  ++   +  +M +NG   ++IT+  +
Sbjct: 465 REAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVI 524

Query: 474 IWGFCRADQVEEAVDLLKEIGKRG 497
           + GF R++++ E V  +KE+  RG
Sbjct: 525 MQGFFRSNKISEIVSFMKEMAGRG 548



 Score =  178 bits (451), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 114/467 (24%), Positives = 224/467 (47%), Gaps = 38/467 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMV 179
           N +  ++C R ++  A  ++ I  +   IP      N L+ GL   +++  A  + + +V
Sbjct: 101 NIVTNSYCLRHRIDCAFSVLPIYLK-TGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLV 159

Query: 180 MSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+ + Y  ++ GL KRG     ++LL  M     +PDV TY+ ++  +  +   
Sbjct: 160 REKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINL 219

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             AI    +  +K  PP + TY  LI+ +CK     +   +L +M     +P++ T++ L
Sbjct: 220 DAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSIL 279

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+GK +DA  V+ +++ +G+EP+ ITY+ ++     RG  D   ++ +++ +   
Sbjct: 280 IDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGI 339

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +F+Y+ILING CK   + +A+  F ++  K  +PD VTY+T+L  L + G + +A +
Sbjct: 340 KPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKK 399

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN----------------- 461
           +   +     +P +  ++TL+ G  K G +E+AM+L+ ++  N                 
Sbjct: 400 IFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLC 459

Query: 462 ------------------GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
                             G+ PD  T+  +I GFCR    +E   +L+++   G    N 
Sbjct: 460 KNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNI 519

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            Y +++ G  +S K+   +  ++ M    +  D T    ++  + ++
Sbjct: 520 TYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLINVLKEN 566



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 107/360 (29%), Positives = 186/360 (51%), Gaps = 1/360 (0%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A++L   M      P VI ++ + +TM +   +   +  +++    G P       I+  
Sbjct: 46  AVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILNIVTN 105

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM-E 324
             C +  I  A  VL      G   ++VT+N+L+     + K  DAV++   L+   + E
Sbjct: 106 SYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVREKICE 165

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN + Y T+++ L  RG  +    +L IM + +  P V TY+I+I+ LCK   +D AIN 
Sbjct: 166 PNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDALCKDINLDAAINL 225

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            N+M  KN  P+I TYN+++  LCK G   +   LL  +   + +P + T++ LIDGL K
Sbjct: 226 LNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNVHTFSILIDGLCK 285

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           +G +E A  +   M+E G+ PD IT+  ++ G+C   QV+ A  +   +  +G K    +
Sbjct: 286 EGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFS 345

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y ++I+G CK K +  A+Q+   +     KPD   +STI+  + + G   +A K++ +++
Sbjct: 346 YSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEML 405



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 98/359 (27%), Positives = 178/359 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +T + ++   C    L  A  L++ M ++N  P+     +LI GL ++ + EK   +L
Sbjct: 202 DVRTYSIVIDALCKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLL 261

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV     P+  T+++++ GLCK G++  A  ++  M   G EPD+ITY+ I+      
Sbjct: 262 SEMVNLNINPNVHTFSILIDGLCKEGKVEDADEVMRHMIEKGVEPDIITYSAIMDGYCLR 321

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A   +     KG  P + +Y+ILI   CK+  +A+A+++  +++ +G  PD VTY
Sbjct: 322 GQVDRARRVFNVLRDKGIKPNIFSYSILINGYCKKKNLAKAMQLFGEISQKGLKPDTVTY 381

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +++++   + G+  DA  + + +L  G  P+   ++TLL      G  +    +   +  
Sbjct: 382 STILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFGYFKYGLVEEAMLLFSKLER 441

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 +  Y ++INGLCK   V  A   F ++ S    PD+ TYN ++   C+EG+ +E
Sbjct: 442 NREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPDVRTYNVMITGFCREGLFDE 501

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
              +L  +  + C    ITYN ++ G  +   + + +    +M   G S D  T   LI
Sbjct: 502 VKGILRKMEDNGCPANNITYNVIMQGFFRSNKISEIVSFMKEMAGRGFSFDATTTGVLI 560



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 70/264 (26%), Positives = 130/264 (49%), Gaps = 8/264 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKA 171
           VE D  T + I+  +C RG++  A ++ +++  +   P+ F + I LI G  +   + KA
Sbjct: 304 VEPDIITYSAIMDGYCLRGQVDRARRVFNVLRDKGIKPNIFSYSI-LINGYCKKKNLAKA 362

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            ++   +   G  PDT+TY+ ++ GL + G+I  A  + DEM   G  PD+  ++T+L  
Sbjct: 363 MQLFGEISQKGLKPDTVTYSTILHGLIEVGRIGDAKKIFDEMLRVGPTPDICLHSTLLFG 422

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
            F  G  ++A+  +    R      +  YT++I  +CK   +  A  + + +   G  PD
Sbjct: 423 YFKYGLVEEAMLLFSKLERNREDTNISFYTVVINGLCKNDRVREAHAIFEKLPSIGLIPD 482

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           + TYN ++   C++G +D+   ++  +   G   N+ITYN ++         + + +I+ 
Sbjct: 483 VRTYNVMITGFCREGLFDEVKGILRKMEDNGCPANNITYNVIMQGFFRS---NKISEIVS 539

Query: 352 IMNEASHSPTVF---TYNILINGL 372
            M E +     F   T  +LIN L
Sbjct: 540 FMKEMAGRGFSFDATTTGVLINVL 563



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 67/271 (24%), Positives = 128/271 (47%), Gaps = 1/271 (0%)

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +NF  +    DDAV + + ++     P+ I ++ L  ++ +   + AV  +   M     
Sbjct: 34  INFDKEVSCLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGI 93

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
             +    NI+ N  C    +D A +     +      ++VT+NT+LG L  E  + +A+ 
Sbjct: 94  PISDSILNIVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVV 153

Query: 419 LLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           L   L+    C P  + Y T+++GL+K+G  EK + L   M +    PD  T+  +I   
Sbjct: 154 LFKKLVREKICEPNEVMYGTVMNGLSKRGHTEKTLSLLRIMEQGNTKPDVRTYSIVIDAL 213

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+   ++ A++LL E+ ++        Y  +I GLCK  + +    +L  M++    P+ 
Sbjct: 214 CKDINLDAAINLLNEMKQKNIPPNIFTYNSLIDGLCKLGQWEKVKTLLSEMVNLNINPNV 273

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             FS ++  +  +G  E+A ++ + +IE  V
Sbjct: 274 HTFSILIDGLCKEGKVEDADEVMRHMIEKGV 304



 Score = 40.4 bits (93), Expect = 2.7,   Method: Compositional matrix adjust.
 Identities = 26/124 (20%), Positives = 54/124 (43%)

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
           C++ A+ L+ +M+     P  I    L             V L +E+   G  + +S   
Sbjct: 42  CLDDAVSLFHRMVRMKPLPSVIDFSKLFKTMINMKHYSAVVSLFREMRILGIPISDSILN 101

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           +V +  C   ++D A  VL + + +    +   F+T++  +  +    +A  L++KL+  
Sbjct: 102 IVTNSYCLRHRIDCAFSVLPIYLKTGIPFNVVTFNTLLGGLFAENKVTDAVVLFKKLVRE 161

Query: 567 KVFE 570
           K+ E
Sbjct: 162 KICE 165


>gi|242047602|ref|XP_002461547.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
 gi|241924924|gb|EER98068.1| hypothetical protein SORBIDRAFT_02g004530 [Sorghum bicolor]
          Length = 696

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 129/446 (28%), Positives = 222/446 (49%), Gaps = 14/446 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQ----IPDFHFCINLIRGLIRIDRIEKASKV 174
           T   +L+  C+  + +DA   ++I+ RR       PD      L++GL    + E+A+++
Sbjct: 181 TFTPLLRTLCAEKRTSDA---MNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAEL 237

Query: 175 LQIMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           + +M   G    P+ ++Y  ++ G  K G +  A  L  +M   G  P+V+T N+++  +
Sbjct: 238 IHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGL 297

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                  +A    +  + +   P   TY  LI           A+ +L +M+ +G  P++
Sbjct: 298 CKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNV 357

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY+ L++  CK G + +A  + N+++  G +PN+ TY +LLH   + G    ++ + D+
Sbjct: 358 VTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDL 417

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +    P    +NI I   CK G +D A  +FN+M  +   PDIV Y TV+  LCK G 
Sbjct: 418 MVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGR 477

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L++A+     +     SP +IT+NTLI G A  G  EKA  L+ +MM+ GI P+  T  +
Sbjct: 478 LDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNS 537

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I    +  +V EA  L   + + G K    +Y  +IHG   + +V   +++L+ M+   
Sbjct: 538 MIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIG 597

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYK 558
            KP    F+T++     DGM     K
Sbjct: 598 LKPTAVTFNTLL-----DGMVSMGLK 618



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 216/444 (48%), Gaps = 18/444 (4%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARR--NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +L+  C+  K  +A++LI +MA    N  P+      +I G  +   + KA  +   M+ 
Sbjct: 221 LLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLD 280

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +T N ++ GLCK   +  A A+L +M      P+  TYN+++     +G++ +
Sbjct: 281 HGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTE 340

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   K+  R G  P ++TY++LI+ +CK    A A E+ + M   G  P+  TY SL++
Sbjct: 341 AVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLH 400

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +G   D   V + ++  GM P    +N  +++    G  D      + M +    P
Sbjct: 401 GYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEASLTFNKMQQQGFMP 460

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +  Y  +I+GLCK G +D A++ F QM+     PDI+T+NT++      G   +A +L 
Sbjct: 461 DIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGFALHGKWEKAEELF 520

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           + +      P + T+N++ID L K+G + +A  L+  M   G  P+ +++ T+I G+  A
Sbjct: 521 YEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNVVSYNTMIHGYFIA 580

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +V E + LL ++   G K     +  ++ G                M+S   KPD    
Sbjct: 581 GEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGLKPDVVTC 624

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
            T++    +DG  E+   L+++++
Sbjct: 625 KTLIDSCCEDGRIEDILTLFREML 648



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 203/462 (43%), Gaps = 55/462 (11%)

Query: 77  EWSSESHVLAVNKKLRGLTITKKSHDPS----LPSSDGPFVENDEKTNNKILQNFCSRGK 132
           E      V +    L+GL   KK  + +    + + DG     +  +   ++  F   G 
Sbjct: 208 ELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIHGFFKEGD 267

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           +  A  L   M      P+   C ++I GL ++  ++KA  VLQ M+    +P+  TYN 
Sbjct: 268 VGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNS 327

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++ G    GQ   A+ +L EMS  G  P+V+TY+ ++  +  +G   +A   +   ++ G
Sbjct: 328 LIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSMIQSG 387

Query: 253 CPPYLITY-----------------------------------TILIEQVCKQCGIARAI 277
             P   TY                                    I I   CK   +  A 
Sbjct: 388 QKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRLDEAS 447

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
              + M  +G  PDIV Y ++++  CK G+ DDA+     ++  G+ P+ IT+NTL+H  
Sbjct: 448 LTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTLIHGF 507

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G W+  +++   M +    P V T+N +I+ L K G V  A   F+ M     +P++
Sbjct: 508 ALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGAKPNV 567

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V+YNT++      G + E ++LL  +      P  +T+NTL+DG                
Sbjct: 568 VSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG---------------- 611

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           M+  G+ PD +T +TLI   C   ++E+ + L +E+  + +K
Sbjct: 612 MVSMGLKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADK 653



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/385 (25%), Positives = 189/385 (49%), Gaps = 3/385 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            PD  T+ +++   C  G +    A L ++  +G     +T+  +LRT+    +   A+ 
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 244 FWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVN 300
               ++ + GC P + +YT L++ +C +     A E++  MA +G  C P++V+Y ++++
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH 260

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K+G    A  +   +L  G+ PN +T N+++  L      D  + +L  M +    P
Sbjct: 261 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN LI+G    G    A+    +M     +P++VTY+ ++  LCK G+  EA ++ 
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIF 380

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           + +  S   P   TY +L+ G A +G +     +   M++NG+ P        I+ +C+ 
Sbjct: 381 NSMIQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKC 440

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +++EA     ++ ++G      AY  VI GLCK  ++D A+     MI     PD   F
Sbjct: 441 GRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITF 500

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           +T++   A  G  E+A +L+ ++++
Sbjct: 501 NTLIHGFALHGKWEKAEELFYEMMD 525



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/286 (30%), Positives = 146/286 (51%), Gaps = 6/286 (2%)

Query: 272 GIARAIEVLDDMAIEGC---SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           G A A+ + + MA  G    +PDI T+  L++  C  G  +     +  ++  G+   ++
Sbjct: 121 GPALAVSMFNRMARAGAKKVAPDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAV 180

Query: 329 TYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           T+  LL +L   +   DA++ +L  M E   +P VF+Y  L+ GLC     + A    + 
Sbjct: 181 TFTPLLRTLCAEKRTSDAMNIVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHM 240

Query: 388 MVS--KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           M     NC P++V+Y TV+    KEG + +A  L   +      P ++T N++IDGL K 
Sbjct: 241 MAEDGDNCPPNVVSYTTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKV 300

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             M+KA  +  QM++  I P+  T+ +LI G+  + Q  EAV +LKE+ + G +     Y
Sbjct: 301 QAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTY 360

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            ++I  LCKS     A ++   MI S  KP+ + + +++   A +G
Sbjct: 361 SMLIDCLCKSGLHAEAREIFNSMIQSGQKPNASTYGSLLHGYATEG 406



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 89/347 (25%), Positives = 160/347 (46%), Gaps = 19/347 (5%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  + S G+ T+A +++  M+R  Q P+      LI  L +     +A ++   M
Sbjct: 324 TYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIFNSM 383

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + SG  P+  TY  ++ G    G +     + D M  +G  P    +N  +      G+ 
Sbjct: 384 IQSGQKPNASTYGSLLHGYATEGNLVDMNNVKDLMVQNGMRPGRHVFNIEIYAYCKCGRL 443

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +    ++G  P ++ YT +I+ +CK   +  A+     M  +G SPDI+T+N+L
Sbjct: 444 DEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPDIITFNTL 503

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++     GK++ A  +   ++ RG+ PN  T+N+++  L   G      K+ D+M  A  
Sbjct: 504 IHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFDLMPRAGA 563

Query: 359 SPTVFTYNILINGLCKYGLVDRAIN---------------SFNQ----MVSKNCQPDIVT 399
            P V +YN +I+G    G V   +                +FN     MVS   +PD+VT
Sbjct: 564 KPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGLKPDVVT 623

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
             T++ + C++G + + L L   + G +     IT N  + G+  K 
Sbjct: 624 CKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVTVKA 670



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/305 (22%), Positives = 138/305 (45%), Gaps = 48/305 (15%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLG----SRGCWDAVDKILDIMNEASHS----- 359
           +DA+ + + LL R    +    N LL ++     S    D     + + N  + +     
Sbjct: 81  EDALDLFDELLQRARPGSIYALNQLLTTVARAPVSSSVRDGPALAVSMFNRMARAGAKKV 140

Query: 360 -PTVFTYNILINGLCKYGLVDRAINSFNQMVSK--------------------------- 391
            P + T+ ILI+  C  G ++    +  Q++                             
Sbjct: 141 APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRAQAVTFTPLLRTLCAEKRTSDAMN 200

Query: 392 ---------NCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLID 440
                     C PD+ +Y T+L  LC E    EA +L+H++  +G +C P +++Y T+I 
Sbjct: 201 IVLRRMPELGCTPDVFSYTTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPNVVSYTTVIH 260

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  K+G + KA  L+ +M+++GI P+ +T  ++I G C+   +++A  +L+++       
Sbjct: 261 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 320

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
             + Y  +IHG   S +   A+++L+ M     +P+   +S ++  +   G+  EA +++
Sbjct: 321 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYSMLIDCLCKSGLHAEAREIF 380

Query: 561 QKLIE 565
             +I+
Sbjct: 381 NSMIQ 385



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 59/236 (25%), Positives = 109/236 (46%), Gaps = 19/236 (8%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           +C  G+L +AS   + M ++  +PD      +I GL +I R++ A      M+  G  PD
Sbjct: 437 YCKCGRLDEASLTFNKMQQQGFMPDIVAYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPD 496

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            IT+N ++ G    G+   A  L  EM   G  P+V T+N+++  +F  GK  +A   + 
Sbjct: 497 IITFNTLIHGFALHGKWEKAEELFYEMMDRGIPPNVNTFNSMIDKLFKEGKVTEARKLFD 556

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-------------------EG 287
              R G  P +++Y  +I        +   +++LDDM +                    G
Sbjct: 557 LMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMG 616

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             PD+VT  +L++  C+ G+ +D + +   +L +  + ++IT N  L  +  +  +
Sbjct: 617 LKPDVVTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKLRGVTVKASY 672


>gi|449440401|ref|XP_004137973.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Cucumis sativus]
          Length = 606

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 222/465 (47%), Gaps = 43/465 (9%)

Query: 123 ILQNFCSR-------GKLTDAS-KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           I++ FC          ++ D+S ++ D   ++    D   C   +  L R   +E   + 
Sbjct: 120 IVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEF 179

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+ MV SG      ++  +V GLCK+G++  A AL+DE+   G +P VITYNT+L    +
Sbjct: 180 LRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIE 239

Query: 235 -----------------------------------NGKFKQAIGFWKDQLRKGCPPYLIT 259
                                              + K ++A   + + L+KG  P +  
Sbjct: 240 IKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYI 299

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           YT +I   CK   + RA  + D+M      P+  TY +L+N +CK G+   A +++N++ 
Sbjct: 300 YTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQ 359

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           S+G++ N + +NTL+     +G  D   ++ +IM +       FT NI+ +G C+    +
Sbjct: 360 SKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRRE 419

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A      M  +   P++V+++ ++   CKE    EA +L  ++     +P ++TYN  I
Sbjct: 420 EAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFI 479

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +   KKG ME+A  L  +M E G+ PD  T+ +LI G   +  V+ A++L  E+ + G  
Sbjct: 480 ERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLN 539

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
                Y ++I GL K  + D A ++ + M      PDD ++S+++
Sbjct: 540 RNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 584



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 186/392 (47%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C +G++  A  L+D +  +   P       L+ G I I  +   +++L +M  + 
Sbjct: 198 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 257

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  TY M++    +  +I  A  L DEM   G EPDV  Y +I+      G  K+A 
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 317

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   +   P   TY  LI   CK   +  A  +++DM  +G   + V +N+L++  
Sbjct: 318 VLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 377

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK+G  D+A+ + N +  +G E ++ T N +          +   ++L  M E   +P V
Sbjct: 378 CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 437

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            +++ILI+  CK      A   F  M  K   P +VTYN  +   CK+G + EA +L++ 
Sbjct: 438 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 497

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   TY +LIDG    G +++A+ L+ +M + G++ + +T+  +I G  +  +
Sbjct: 498 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 557

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            +EA  L  E+ K G    +  Y  +I  L K
Sbjct: 558 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 589



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 178/366 (48%), Gaps = 10/366 (2%)

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           S++ + D     G E D  +    L  +  +G  +  + F +  +  G    + ++T ++
Sbjct: 140 SSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVV 199

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           + +CK+  + RA  ++D++  +G  P ++TYN+L+N   +       V  +N +LS  ME
Sbjct: 200 DGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKD----VGGVNEILSL-ME 254

Query: 325 PNSITYN----TLLHSLGSRGC-WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            N + YN    T+L    SR    +  +K+ D M +    P V+ Y  +IN  CK+G + 
Sbjct: 255 KNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMK 314

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           RA   F++M  +   P+  TY  ++   CK G +  A  +++ +         + +NTL+
Sbjct: 315 RAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLM 374

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DG  KKG +++A+ L   M + G   D  T   +  GFCR+++ EEA  LL  + +RG  
Sbjct: 375 DGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVA 434

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
               ++ ++I   CK +    A ++ ++M      P    ++  +++    G  EEAYKL
Sbjct: 435 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 494

Query: 560 WQKLIE 565
             ++ E
Sbjct: 495 INEMQE 500



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 160/334 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T   +++ +    K+ +A KL D M ++   PD +   ++I    +   +++A 
Sbjct: 258 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 317

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M     VP+  TY  ++ G CK G++++A  ++++M   G + + + +NT++   
Sbjct: 318 VLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 377

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A+       +KG      T  I+    C+      A  +L  M   G +P++
Sbjct: 378 CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 437

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V+++ L++  CK+  + +A  +   +  +G  P+ +TYN  +     +G  +   K+++ 
Sbjct: 438 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 497

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E    P  +TY  LI+G    G VDRA+  FN+M       ++VTY  ++  L K+G 
Sbjct: 498 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 557

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            +EA +L   +N     P    Y++LI  L K G
Sbjct: 558 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 591



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 153/309 (49%), Gaps = 6/309 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      I+   C  G +  A  L D M  R  +P+ +    LI G  +   ++ A 
Sbjct: 293 IEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAE 352

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M   G   + + +N ++ G CK+G I  A+ L + M   G E D  T N I    
Sbjct: 353 MMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGF 412

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + + ++A         +G  P +++++ILI+  CK+   A A  +   M  +G +P +
Sbjct: 413 CRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSV 472

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+ +   CK+GK ++A  +IN +  RG+ P++ TY +L+   G R   + VD+ L++
Sbjct: 473 VTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID--GERASGN-VDRALEL 529

Query: 353 MNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            NE      +  V TY ++I+GL K G  D A   +++M  +   PD   Y++++ +L K
Sbjct: 530 FNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 589

Query: 410 EGMLNEALQ 418
            G L   L+
Sbjct: 590 VGPLVSGLE 598



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/246 (19%), Positives = 109/246 (44%), Gaps = 2/246 (0%)

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY--NILINGLCKYGLVDRAINSFNQM 388
           N L   +     W  V++I+  +    + P++     ++L        + D ++  F+  
Sbjct: 89  NVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYA 148

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             K  + D  +    L AL + G +   ++ L  +  S     + ++  ++DGL KKG +
Sbjct: 149 RKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEV 208

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +A  L  +++  G  P  IT+ TL+ G+     V    ++L  + K       + Y ++
Sbjct: 209 VRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTML 268

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           I    +S K++ A ++ + M+    +PD  ++++I+      G  + A+ L+ ++ E ++
Sbjct: 269 IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRL 328

Query: 569 FEKGTT 574
                T
Sbjct: 329 VPNAYT 334


>gi|357130059|ref|XP_003566674.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 833

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/489 (25%), Positives = 231/489 (47%), Gaps = 38/489 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ--IPDFHFCINLIRGLIRIDRIEK 170
           VE D  + N +++  C   +   A  L+  M +++    P+      +I GL R   + K
Sbjct: 186 VEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHGLFREGEVSK 245

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  +   M+  G VPD +TY  ++  LCK   +  A  +L +M  +G +P+ +TYN ++ 
Sbjct: 246 ACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPNKVTYNCMIH 305

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
               +G++K+  G +++   +G  P ++T    +  +CK      A E  D MA +G  P
Sbjct: 306 GYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKP 365

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           ++VTY+ L++    +G + D + + N++   G+  +   +N ++ + G RG  D    I 
Sbjct: 366 NLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIF 425

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD-------------- 396
             M E    P   TY I+I    + G +  A++ FNQM++   +P+              
Sbjct: 426 TQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMH 485

Query: 397 ----------------------IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
                                 IV +N+++ +LCKEG + EA  +   +      P +IT
Sbjct: 486 GNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIHIGERPDVIT 545

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           +N+LIDG    G +EKA  +   M+  GI PD +++ TLI G+CR  ++++ + L  E+ 
Sbjct: 546 FNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEML 605

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
            +G K     Y +++HGL    +   A ++   MI S    D +    I+  +  +   +
Sbjct: 606 SKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIILGGLCRNNCDD 665

Query: 555 EAYKLWQKL 563
           EA  +++KL
Sbjct: 666 EAIAMFKKL 674



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 188/360 (52%), Gaps = 3/360 (0%)

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK--GCPPYLITYTILIEQ 266
           LL  M   G EPD I+YNT+++T+ ++ + ++A+      ++K  GC P ++TY  +I  
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           + ++  +++A  +  +M  +G  PD+VTY S+++  CK    D A LV+  ++S G +PN
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
            +TYN ++H     G W     +   M      P + T N  ++ LCK+G    A   F+
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M +K  +P++VTY+ +L     EG   + L L + + G+        +N +ID   K+G
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            M++ M+++ QM E G+ PD  T+  +I  F R  ++ +A+D   ++   G K     Y 
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476

Query: 507 LVIHGLCKSKKVDMAIQVL-ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +I G C    +  A +++ E+M     +P+   F++I+  +  +G   EA+ ++  +I 
Sbjct: 477 SLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIH 536



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 199/398 (50%), Gaps = 3/398 (0%)

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM--SVSGCEPDVITYNTILRT 231
           +L  M   G  PDTI+YN +V  LC+  + + A+ LL  M     GC P+V+TYNT++  
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +F  G+  +A   + + +++G  P ++TYT +I+ +CK   + +A  VL  M   G  P+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            VTYN +++     G++ +   +   + S+G+ PN +T N+ + SL   G      +  D
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKSKEAAEFFD 356

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M    H P + TY++L++G    G     +N FN M       D   +N V+ A  K G
Sbjct: 357 SMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIVIDAYGKRG 416

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           M++E + +   +      P   TY  +I   ++ G +  AM  + QM+  G+ P+ I + 
Sbjct: 417 MMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGLKPEGIVYH 476

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMIS 530
           +LI GFC    + +A +L+ E+  RG    N   +  +I+ LCK  +V  A  + + +I 
Sbjct: 477 SLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVIH 536

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              +PD   F++++      G  E+A+ +   +I   +
Sbjct: 537 IGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGI 574



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 114/481 (23%), Positives = 229/481 (47%), Gaps = 36/481 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++      G+++ A  L   M ++  +PD     ++I  L +   ++KA  VL+ M
Sbjct: 229 TYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQM 288

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +G  P+ +TYN M+ G    GQ +    +  EM+  G  P+++T N+ + ++  +GK 
Sbjct: 289 ISNGFQPNKVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSYMSSLCKHGKS 348

Query: 239 KQAIGFWKDQLRKGCPPYLITYTIL----------------------------------- 263
           K+A  F+     KG  P L+TY++L                                   
Sbjct: 349 KEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSMEGNGIVADQRVFNIV 408

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+   K+  +   + +   M  +G  PD  TY  ++    + G+  DA+   N +++ G+
Sbjct: 409 IDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRLADAMDKFNQMIAMGL 468

Query: 324 EPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +P  I Y++L+      G    A + + ++M+     P +  +N +IN LCK G V  A 
Sbjct: 469 KPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAH 528

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           + F+ ++    +PD++T+N+++      G + +A  +L  +  +   P +++YNTLIDG 
Sbjct: 529 DIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGY 588

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            + G ++  ++L+G+M+  G+ P  IT+  ++ G     +   A  +  E+ + G  M  
Sbjct: 589 CRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDI 648

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           S   +++ GLC++   D AI + + + +   K +  + +T++  +      EEA +L+  
Sbjct: 649 STCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDS 708

Query: 563 L 563
           +
Sbjct: 709 I 709



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 199/434 (45%), Gaps = 1/434 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  + + C  GK  +A++  D MA +   P+      L+ G            +   M
Sbjct: 334 TCNSYMSSLCKHGKSKEAAEFFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSM 393

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G V D   +N+++    KRG +   + +  +M   G  PD  TY  ++      G+ 
Sbjct: 394 EGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMGRL 453

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS-PDIVTYNS 297
             A+  +   +  G  P  I Y  LI+  C    + +A E++ +M   G   P+IV +NS
Sbjct: 454 ADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNS 513

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++N  CK+G+  +A  + + ++  G  P+ IT+N+L+   G  G  +    +LD M  A 
Sbjct: 514 IINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAG 573

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V +YN LI+G C+ G +D  +  F +M+SK  +P  +TY  +L  L  +G    A 
Sbjct: 574 IEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAK 633

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++ H +  S  +  + T   ++ GL +  C ++A+ ++ ++    +  +     T+I   
Sbjct: 634 KMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAM 693

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +  + EEA +L   I   G     S Y ++I  L K   V+ A  +  LM  S   P  
Sbjct: 694 YKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSS 753

Query: 538 TVFSTIVKKVADDG 551
            + + I++ + + G
Sbjct: 754 RLLNYIIRVLLEKG 767



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 99/360 (27%), Positives = 181/360 (50%), Gaps = 1/360 (0%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S +G  +  D++  N ++  +  RG + +   +   M  +  IPD      +I    R+ 
Sbjct: 392 SMEGNGIVADQRVFNIVIDAYGKRGMMDETMLIFTQMQEQGVIPDACTYGIVIAAFSRMG 451

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC-EPDVITY 225
           R+  A      M+  G  P+ I Y+ ++ G C  G +  A  L+ EM   G   P+++ +
Sbjct: 452 RLADAMDKFNQMIAMGLKPEGIVYHSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFF 511

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N+I+ ++   G+  +A   +   +  G  P +IT+  LI+       I +A  VLD M  
Sbjct: 512 NSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMIS 571

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
            G  PD+V+YN+L++  C+ G+ DD +++   +LS+G++P +ITY  +LH L + G    
Sbjct: 572 AGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVG 631

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             K+   M E+  +  + T  I++ GLC+    D AI  F ++ + N + +I   NT++ 
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMID 691

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           A+ K     EA +L   ++ +   P   TY  +I  L K+G +E+A  ++  M ++G +P
Sbjct: 692 AMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAP 751



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/327 (25%), Positives = 157/327 (48%), Gaps = 1/327 (0%)

Query: 121 NKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           + ++Q FC  G L  A +L+ ++M+R    P+  F  ++I  L +  R+ +A  +   ++
Sbjct: 476 HSLIQGFCMHGNLVKAKELVSEMMSRGIPRPNIVFFNSIINSLCKEGRVVEAHDIFDFVI 535

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  PD IT+N ++ G    G+I  A  +LD M  +G EPDV++YNT++     NG+  
Sbjct: 536 HIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMISAGIEPDVVSYNTLIDGYCRNGRID 595

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
             +  + + L KG  P  ITY I++  +        A ++  +M   G + DI T   ++
Sbjct: 596 DGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVGAKKMCHEMIESGTTMDISTCGIIL 655

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C+    D+A+ +   L +  ++ N    NT++ ++      +   ++ D ++     
Sbjct: 656 GGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMIDAMYKVRKREEAKELFDSISATGLV 715

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   TY ++I  L K G V+ A N F+ M    C P     N ++  L ++G + +A   
Sbjct: 716 PNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAPSSRLLNYIIRVLLEKGEIVKAGNY 775

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +  ++G   S    T + L+   +++G
Sbjct: 776 MFKVDGKRISLEASTVSLLMALFSREG 802



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 77/280 (27%), Positives = 142/280 (50%), Gaps = 9/280 (3%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDK 348
           P + TYN L++  C+  +      +    L  G++ + I  + LL  L  ++   D V+ 
Sbjct: 117 PTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVASILLKCLYHAKRSDDVVNL 176

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN--CQPDIVTYNTVLGA 406
           +L  M E    P   +YN ++  LC+     RA++  + MV K+  C P++VTYNTV+  
Sbjct: 177 LLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMVKKSGGCSPNVVTYNTVIHG 236

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           L +EG +++A  L H +      P ++TY ++ID L K   M+KA ++  QM+ NG  P+
Sbjct: 237 LFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARAMDKAELVLRQMISNGFQPN 296

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRG---NKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            +T+  +I G+  + Q +E   + +E+  +G   N +  ++Y   +  LCK  K   A +
Sbjct: 297 KVTYNCMIHGYSISGQWKETAGMFREMTSQGLMPNIVTCNSY---MSSLCKHGKSKEAAE 353

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             + M +  +KP+   +S ++   A +G   +   L+  +
Sbjct: 354 FFDSMAAKGHKPNLVTYSVLLHGYATEGCFVDMLNLFNSM 393



 Score =  120 bits (300), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 74/300 (24%), Positives = 145/300 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ + C  G++ +A  + D +    + PD     +LI G   + +IEKA  VL  M+ 
Sbjct: 512 NSIINSLCKEGRVVEAHDIFDFVIHIGERPDVITFNSLIDGYGLVGKIEKAFGVLDAMIS 571

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PD ++YN ++ G C+ G+I   + L  EM   G +P  ITY  IL  +F++G+   
Sbjct: 572 AGIEPDVVSYNTLIDGYCRNGRIDDGLILFGEMLSKGVKPTTITYGIILHGLFNDGRTVG 631

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     + +  G    + T  I++  +C+      AI +   +       +I   N++++
Sbjct: 632 AKKMCHEMIESGTTMDISTCGIILGGLCRNNCDDEAIAMFKKLGAMNVKFNIAIINTMID 691

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K  K ++A  + +++ + G+ PN+ TY  ++ +L   G  +  D +  +M ++  +P
Sbjct: 692 AMYKVRKREEAKELFDSISATGLVPNASTYGVMIKNLLKEGSVEEADNMFSLMEKSGCAP 751

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +    N +I  L + G + +A N   ++  K    +  T + ++    +EG   E ++LL
Sbjct: 752 SSRLLNYIIRVLLEKGEIVKAGNYMFKVDGKRISLEASTVSLLMALFSREGKYWEDVKLL 811



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 42/192 (21%), Positives = 83/192 (43%), Gaps = 8/192 (4%)

Query: 381 AINSFNQMVSKNCQPDIV-----TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           A+  FN++  +  +P +      TYN ++   C+         L      +     +I  
Sbjct: 98  AVALFNRICREEARPRVALPTVCTYNILMDCCCRTRRPTVGFALFGRFLKTGLKMDVIVA 157

Query: 436 NTLIDGL-AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           + L+  L   K   +   +L  +M E G+ PD I++ T++   C   + + A+DLL  + 
Sbjct: 158 SILLKCLYHAKRSDDVVNLLLHRMPELGVEPDTISYNTVVKTLCEDSRSQRALDLLHTMV 217

Query: 495 KR--GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           K+  G       Y  VIHGL +  +V  A  +   M+     PD   +++I+  +     
Sbjct: 218 KKSGGCSPNVVTYNTVIHGLFREGEVSKACNLFHEMMQQGVVPDVVTYTSIIDALCKARA 277

Query: 553 TEEAYKLWQKLI 564
            ++A  + +++I
Sbjct: 278 MDKAELVLRQMI 289


>gi|358346502|ref|XP_003637306.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
 gi|355503241|gb|AES84444.1| Pentatricopeptide repeat-containing protein, partial [Medicago
           truncatula]
          Length = 603

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 221/444 (49%), Gaps = 1/444 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++++F   G+L +A +++  M  +  +P+      +I+    +  +E A  + + M + G
Sbjct: 141 MVESFSEVGRLKEAVEMVIEMHNQGLVPNTRTLNWIIKVTSEMGLVEYAELLFEEMCVRG 200

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD+I+Y +MV   CK G I  A   L  M   G   D  T+  I+      G   +A+
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTRAL 260

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            +++  +  G  P LI +T +IE +CK+  I +A E+L++M  +G  P++ T+ SL++  
Sbjct: 261 WYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLIDGL 320

Query: 303 CKQGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
           CK+G  + A  L +  + S   +PN +TY  ++         +  + +L  M E    P 
Sbjct: 321 CKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGLVPN 380

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TY  LI+G CK G  +RA +  N M S+   P++ TYN ++  LCK G + EA ++L 
Sbjct: 381 TNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYKMLE 440

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
               +   P   TYN L+    K+  + +A+ L+ +M++ GI PD  ++ TLI  FCR +
Sbjct: 441 DGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFCREN 500

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +++E+    +E  + G    N  Y  +I G C+   + +A++    +      PD   + 
Sbjct: 501 RMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSITYG 560

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            I+  +      +EA  L+  +IE
Sbjct: 561 AIISGLCKQSKRDEARSLYDSMIE 584



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 195/406 (48%), Gaps = 42/406 (10%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCINLIRGLIRIDRIE 169
           V+ D  +   ++  +C  G + +A K + +M  R  + D   F   I+   G     R  
Sbjct: 201 VQPDSISYRVMVVMYCKIGNILEADKWLSVMLERGFVVDNATFTLIISRFSGKGYTTR-- 258

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A    + +V  G  P+ I +  M+ GLCKRG I+ A  +L+EM   G +P+V T+ +++
Sbjct: 259 -ALWYFRRLVDMGLEPNLINFTCMIEGLCKRGSIKQAFEMLEEMVGKGWKPNVYTHTSLI 317

Query: 230 RTMFDNGKFKQAIGFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
             +   G  ++A   +   +R +   P ++TYT +I   C++  + RA  +L  M  +G 
Sbjct: 318 DGLCKKGWTEKAFRLFLKLVRSENHKPNVLTYTAMISGYCREDKLNRAEMLLSRMKEQGL 377

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            P+  TY +L++  CK G ++ A  ++N + S G  PN  TYN +++ L  RG      K
Sbjct: 378 VPNTNTYTTLIDGHCKAGNFERAYDLMNLMSSEGFSPNLCTYNAIVNGLCKRGRVQEAYK 437

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L+   +    P  FTYNIL++  CK   + +A+  FN+M+    QPDI +Y T++   C
Sbjct: 438 MLEDGFQNGLKPDKFTYNILMSEHCKQENIRQALALFNKMLKIGIQPDIHSYTTLIAVFC 497

Query: 409 KEGMLNE-----------------------------------ALQLLHLLNGSSCSPCLI 433
           +E  + E                                   A++  H L+   C+P  I
Sbjct: 498 RENRMKESEMFFEEAVRIGIIPTNKTYTSMICGYCREGNLTLAMKFFHRLSDHGCAPDSI 557

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           TY  +I GL K+   ++A  LY  M+E G+ P ++T  TL + +C+
Sbjct: 558 TYGAIISGLCKQSKRDEARSLYDSMIEKGLVPCEVTRITLAYEYCK 603


>gi|224713518|gb|ACN62066.1| PPR-817 [Zea mays]
          Length = 817

 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 229/478 (47%), Gaps = 37/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +L++ C +GK   A  L+ +MA    +  P+      +I G  +   + KA  + + MV 
Sbjct: 191 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 250

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TYN +V  LCK   +  A A L +M      P+  TYN ++      G++K+
Sbjct: 251 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 310

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +K+  R    P ++T ++L+  +CK   I  A +V D MA++G +PD+ +YN ++N
Sbjct: 311 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 370

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +G   D   + + +L  G+ P+  T+N L+ +  + G  D    I + M +    P
Sbjct: 371 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 430

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP------------------------- 395
            V TY  +I  LC+ G +D A+  FNQM+ +   P                         
Sbjct: 431 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 490

Query: 396 ----------DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                     DIV +++++  LCK G + +A  +  L       P  + YN L+DG    
Sbjct: 491 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLV 550

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G MEKA+ ++  M+  GI P+ + + TL+ G+C+  +++E + L +E+ +RG K     Y
Sbjct: 551 GKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 610

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            ++I GL ++ +   A      M  S    D   ++ +++ +  +   +EA  L+++L
Sbjct: 611 SIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 668



 Score =  199 bits (507), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 124/449 (27%), Positives = 218/449 (48%), Gaps = 2/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C    +  A   +  M  +  +P+     NLI G     + ++A +V 
Sbjct: 256 DLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVF 315

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M     +PD +T +M++G LCK G+I+ A  + D M++ G  PDV +YN +L      
Sbjct: 316 KEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLNGYATK 375

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G        +   L  G  P   T+ +LI+       + +A+ + ++M   G  PD+VTY
Sbjct: 376 GCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTY 435

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC-WDAVDKILDIMN 354
            +++   C+ GK DDA+   N ++ +G+ P+   YN L+    + G    A + I +IMN
Sbjct: 436 RTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMN 495

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
              H   VF ++ +IN LCK G V  A N F+  V+    PD V YN ++   C  G + 
Sbjct: 496 NGMHLDIVF-FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKME 554

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +AL++   +  +   P ++ Y TL++G  K G +++ + L+ +M++ GI P  I +  +I
Sbjct: 555 KALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIII 614

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G   A +   A     E+ + G  M    Y +V+ GL K++  D AI + + + +   K
Sbjct: 615 DGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVK 674

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +    +T++  +      EEA  L+  +
Sbjct: 675 INIITLNTMIDGMFQTRRVEEAKDLFASI 703



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 219/445 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  + S G+  +A ++   M R + +PD      L+  L +  +I++A  V   M
Sbjct: 294 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 353

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            M G  PD  +YN+M+ G   +G +     L D M   G  PD  T+N +++   + G  
Sbjct: 354 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 413

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + +    G  P ++TY  +I  +C+   +  A+E  + M  +G +PD   YN L
Sbjct: 414 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 473

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C  G    A  +I+ +++ GM  + + +++++++L   G       I D+      
Sbjct: 474 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 533

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    YN+L++G C  G +++A+  F+ MVS   +P++V Y T++   CK G ++E L 
Sbjct: 534 HPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLS 593

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P  I Y+ +IDGL + G    A + + +M E+GI+ D  T+  ++ G  
Sbjct: 594 LFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLF 653

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +    +EA+ L KE+     K+       +I G+ ++++V+ A  +   +  SR  P   
Sbjct: 654 KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVV 713

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            +S ++  +  +G+ EEA  ++  +
Sbjct: 714 TYSIMITNLIKEGLVEEAEDMFSSM 738



 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 207/414 (50%), Gaps = 3/414 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-A 208
           P  H    L+    R  R E A      ++ +G   + I  N ++ G C+  +   A+  
Sbjct: 112 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 171

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQ 266
           LL      GC PDV +Y+ +L+++ D GK  QA    +     G  C P ++ Y  +I+ 
Sbjct: 172 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 231

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
             K+  + +A ++  +M   G  PD+VTYNS+V+  CK    D A   +  ++++ + PN
Sbjct: 232 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 291

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           + TYN L++   S G W    ++   M   S  P V T ++L+  LCKYG +  A + F+
Sbjct: 292 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 351

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M  K   PD+ +YN +L     +G L +   L  L+ G   +P   T+N LI   A  G
Sbjct: 352 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 411

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            ++KAM+++ +M ++G+ PD +T+RT+I   CR  ++++A++   ++  +G      AY 
Sbjct: 412 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 471

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            +I G C    +  A +++  ++++    D   FS+I+  +   G   +A  ++
Sbjct: 472 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 525



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/433 (25%), Positives = 213/433 (49%), Gaps = 2/433 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKV 174
           D  T + ++ + C  GK+ +A  + D MA + Q PD F + I ++ G      +   + +
Sbjct: 326 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI-MLNGYATKGCLVDMTDL 384

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             +M+  G  PD  T+N+++      G +  A+ + +EM   G +PDV+TY T++  +  
Sbjct: 385 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 444

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK   A+  +   + +G  P    Y  LI+  C    + +A E++ ++   G   DIV 
Sbjct: 445 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 504

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           ++S++N  CK G+  DA  + +  ++ G+ P+++ YN L+      G  +   ++ D M 
Sbjct: 505 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMV 564

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            A   P V  Y  L+NG CK G +D  ++ F +M+ +  +P  + Y+ ++  L + G   
Sbjct: 565 SAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTV 624

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A    H +  S  +  + TYN ++ GL K  C ++A+ L+ ++    +  + IT  T+I
Sbjct: 625 PAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 684

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G  +  +VEEA DL   I +         Y ++I  L K   V+ A  +   M ++  +
Sbjct: 685 DGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 744

Query: 535 PDDTVFSTIVKKV 547
           P+  + + +V+++
Sbjct: 745 PNSRLLNHVVREL 757



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 195/412 (47%), Gaps = 5/412 (1%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T N +++ + + G L  A  + + M      PD      +I  L RI +++
Sbjct: 390 GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 449

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A +    M+  G  PD   YN ++ G C  G +  A  L+ E+  +G   D++ +++I+
Sbjct: 450 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 509

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G+   A   +   +  G  P  + Y +L++  C    + +A+ V D M   G  
Sbjct: 510 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE 569

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++V Y +LVN  CK G+ D+ + +   +L RG++P++I Y+ ++  L   G        
Sbjct: 570 PNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFEAGRTVPAKMK 629

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M E+  +  + TYNI++ GL K    D AI  F ++ + N + +I+T NT++  + +
Sbjct: 630 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 689

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              + EA  L   ++ S   P ++TY+ +I  L K+G +E+A  ++  M   G  P+   
Sbjct: 690 TRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 749

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI-----HGLCKSK 516
              ++    + +++  A   L +I +R   + +    L++      G C+ +
Sbjct: 750 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQ 801



 Score =  118 bits (296), Expect = 7e-24,   Method: Compositional matrix adjust.
 Identities = 84/378 (22%), Positives = 166/378 (43%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T   ++   C  GK+ DA +  + M  +   PD +    LI+G      + KA 
Sbjct: 428 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 487

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +++  ++ +G   D + ++ ++  LCK G++  A  + D     G  PD + YN ++   
Sbjct: 488 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGY 547

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK ++A+  +   +  G  P ++ Y  L+   CK   I   + +  +M   G  P  
Sbjct: 548 CLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 607

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + Y+ +++   + G+   A +  + +   G+  +  TYN +L  L    C+D    +   
Sbjct: 608 ILYSIIIDGLFEAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 667

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +   +    + T N +I+G+ +   V+ A + F  +      P +VTY+ ++  L KEG+
Sbjct: 668 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGL 727

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA  +   +  + C P     N ++  L KK  + +A     ++ E   S + +T   
Sbjct: 728 VEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAML 787

Query: 473 LIWGFCRADQVEEAVDLL 490
           L+  F       E +  L
Sbjct: 788 LVDLFSSKGTCREQIRFL 805



 Score = 95.9 bits (237), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 3/220 (1%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SPT  TY IL++   +    + A+  F Q++    + +I+  N +L   C+    +EAL 
Sbjct: 111 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 170

Query: 419 -LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI--SPDDITHRTLIW 475
            LLH      C P + +Y+ L+  L  +G   +A  L   M E G   SP+ + + T+I 
Sbjct: 171 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 230

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GF +   V +A DL KE+ +RG       Y  V+H LCK++ +D A   L  M++ R  P
Sbjct: 231 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 290

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           ++  ++ ++   +  G  +EA ++++++    +     TL
Sbjct: 291 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 330


>gi|449531231|ref|XP_004172591.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like, partial [Cucumis sativus]
          Length = 602

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/465 (26%), Positives = 222/465 (47%), Gaps = 43/465 (9%)

Query: 123 ILQNFCSR-------GKLTDAS-KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           I++ FC          ++ D+S ++ D   ++    D   C   +  L R   +E   + 
Sbjct: 116 IVEKFCDMLFRVYMDNRMFDSSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEF 175

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+ MV SG      ++  +V GLCK+G++  A AL+DE+   G +P VITYNT+L    +
Sbjct: 176 LRQMVDSGIEIRVCSWTAVVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIE 235

Query: 235 -----------------------------------NGKFKQAIGFWKDQLRKGCPPYLIT 259
                                              + K ++A   + + L+KG  P +  
Sbjct: 236 IKDVGGVNEILSLMEKNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYI 295

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           YT +I   CK   + RA  + D+M      P+  TY +L+N +CK G+   A +++N++ 
Sbjct: 296 YTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQ 355

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           S+G++ N + +NTL+     +G  D   ++ +IM +       FT NI+ +G C+    +
Sbjct: 356 SKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRRE 415

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A      M  +   P++V+++ ++   CKE    EA +L  ++     +P ++TYN  I
Sbjct: 416 EAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFI 475

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +   KKG ME+A  L  +M E G+ PD  T+ +LI G   +  V+ A++L  E+ + G  
Sbjct: 476 ERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLN 535

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
                Y ++I GL K  + D A ++ + M      PDD ++S+++
Sbjct: 536 RNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLI 580



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/392 (26%), Positives = 186/392 (47%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C +G++  A  L+D +  +   P       L+ G I I  +   +++L +M  + 
Sbjct: 194 VVDGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNV 253

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  TY M++    +  +I  A  L DEM   G EPDV  Y +I+      G  K+A 
Sbjct: 254 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 313

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   +   P   TY  LI   CK   +  A  +++DM  +G   + V +N+L++  
Sbjct: 314 VLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 373

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK+G  D+A+ + N +  +G E ++ T N +          +   ++L  M E   +P V
Sbjct: 374 CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 433

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            +++ILI+  CK      A   F  M  K   P +VTYN  +   CK+G + EA +L++ 
Sbjct: 434 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 493

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P   TY +LIDG    G +++A+ L+ +M + G++ + +T+  +I G  +  +
Sbjct: 494 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 553

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            +EA  L  E+ K G    +  Y  +I  L K
Sbjct: 554 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 585



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 96/366 (26%), Positives = 178/366 (48%), Gaps = 10/366 (2%)

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           S++ + D     G E D  +    L  +  +G  +  + F +  +  G    + ++T ++
Sbjct: 136 SSLEVFDYARKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVV 195

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           + +CK+  + RA  ++D++  +G  P ++TYN+L+N   +       V  +N +LS  ME
Sbjct: 196 DGLCKKGEVVRAKALMDELVCKGFKPSVITYNTLLNGYIEIKD----VGGVNEILSL-ME 250

Query: 325 PNSITYN----TLLHSLGSRGC-WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            N + YN    T+L    SR    +  +K+ D M +    P V+ Y  +IN  CK+G + 
Sbjct: 251 KNVVDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMK 310

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           RA   F++M  +   P+  TY  ++   CK G +  A  +++ +         + +NTL+
Sbjct: 311 RAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLM 370

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           DG  KKG +++A+ L   M + G   D  T   +  GFCR+++ EEA  LL  + +RG  
Sbjct: 371 DGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVA 430

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
               ++ ++I   CK +    A ++ ++M      P    ++  +++    G  EEAYKL
Sbjct: 431 PNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKL 490

Query: 560 WQKLIE 565
             ++ E
Sbjct: 491 INEMQE 496



 Score =  139 bits (350), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 83/334 (24%), Positives = 160/334 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T   +++ +    K+ +A KL D M ++   PD +   ++I    +   +++A 
Sbjct: 254 VDYNVTTYTMLIEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAF 313

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M     VP+  TY  ++ G CK G++++A  ++++M   G + + + +NT++   
Sbjct: 314 VLFDEMTERRLVPNAYTYGALINGACKAGEMKAAEMMVNDMQSKGVDVNRVIFNTLMDGY 373

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A+       +KG      T  I+    C+      A  +L  M   G +P++
Sbjct: 374 CKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGFCRSNRREEAKRLLLTMEERGVAPNV 433

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V+++ L++  CK+  + +A  +   +  +G  P+ +TYN  +     +G  +   K+++ 
Sbjct: 434 VSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSVVTYNAFIERYCKKGKMEEAYKLINE 493

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E    P  +TY  LI+G    G VDRA+  FN+M       ++VTY  ++  L K+G 
Sbjct: 494 MQERGLMPDTYTYTSLIDGERASGNVDRALELFNEMPQLGLNRNVVTYTVIISGLSKDGR 553

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            +EA +L   +N     P    Y++LI  L K G
Sbjct: 554 ADEAFKLYDEMNKEGIVPDDGIYSSLIASLHKVG 587



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 88/309 (28%), Positives = 153/309 (49%), Gaps = 6/309 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      I+   C  G +  A  L D M  R  +P+ +    LI G  +   ++ A 
Sbjct: 289 IEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRLVPNAYTYGALINGACKAGEMKAAE 348

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M   G   + + +N ++ G CK+G I  A+ L + M   G E D  T N I    
Sbjct: 349 MMVNDMQSKGVDVNRVIFNTLMDGYCKKGMIDEALRLQNIMQQKGFEIDAFTCNIIASGF 408

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + + ++A         +G  P +++++ILI+  CK+   A A  +   M  +G +P +
Sbjct: 409 CRSNRREEAKRLLLTMEERGVAPNVVSFSILIDIYCKEQNFAEARRLFKVMEKKGKAPSV 468

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+ +   CK+GK ++A  +IN +  RG+ P++ TY +L+   G R   + VD+ L++
Sbjct: 469 VTYNAFIERYCKKGKMEEAYKLINEMQERGLMPDTYTYTSLID--GERASGN-VDRALEL 525

Query: 353 MNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            NE      +  V TY ++I+GL K G  D A   +++M  +   PD   Y++++ +L K
Sbjct: 526 FNEMPQLGLNRNVVTYTVIISGLSKDGRADEAFKLYDEMNKEGIVPDDGIYSSLIASLHK 585

Query: 410 EGMLNEALQ 418
            G L   L+
Sbjct: 586 VGPLVSGLE 594



 Score = 62.4 bits (150), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 49/246 (19%), Positives = 109/246 (44%), Gaps = 2/246 (0%)

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY--NILINGLCKYGLVDRAINSFNQM 388
           N L   +     W  V++I+  +    + P++     ++L        + D ++  F+  
Sbjct: 85  NVLKFIVNDGNLWSNVERIVSSIGGEFNEPSIVEKFCDMLFRVYMDNRMFDSSLEVFDYA 144

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             K  + D  +    L AL + G +   ++ L  +  S     + ++  ++DGL KKG +
Sbjct: 145 RKKGFEIDERSCFEFLLALKRSGNMELCVEFLRQMVDSGIEIRVCSWTAVVDGLCKKGEV 204

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +A  L  +++  G  P  IT+ TL+ G+     V    ++L  + K       + Y ++
Sbjct: 205 VRAKALMDELVCKGFKPSVITYNTLLNGYIEIKDVGGVNEILSLMEKNVVDYNVTTYTML 264

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           I    +S K++ A ++ + M+    +PD  ++++I+      G  + A+ L+ ++ E ++
Sbjct: 265 IEWYSRSSKIEEAEKLFDEMLKKGIEPDVYIYTSIINWNCKFGNMKRAFVLFDEMTERRL 324

Query: 569 FEKGTT 574
                T
Sbjct: 325 VPNAYT 330


>gi|357118215|ref|XP_003560853.1| PREDICTED: pentatricopeptide repeat-containing protein At3g61520,
           mitochondrial-like [Brachypodium distachyon]
          Length = 597

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 220/443 (49%), Gaps = 11/443 (2%)

Query: 134 TDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
            DA++ + D +A     PD      L+  L +   +   +++   M  +   P+ +TY +
Sbjct: 118 ADAARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGI 177

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCE--PDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           +V GLCK G++  A+++LD MS    +  PDV+  N I+  +   G+ +QA+ F ++++R
Sbjct: 178 LVKGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMR 237

Query: 251 K--GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
              GC P  +TY  L    C+   +  A E++  M  E  +P+ VT N++V   C  G+ 
Sbjct: 238 SVHGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRV 297

Query: 309 DDAVLVINNLLSRGMEP----NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             A+        R + P    N++TY+TL+ +           ++   M +  +SP    
Sbjct: 298 GAALEFFRE--KRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIM 355

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y  +I+GL + G +D A +    M     Q D   YN ++G  C+   LNEA +LL  + 
Sbjct: 356 YFTMISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMK 415

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
            +   P + TYNTL+ GL K G       L G+M++ G  P  +T  TLI G+C+  Q++
Sbjct: 416 EAGLQPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQID 475

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA+ + + + + G +     Y  +I  LCKS+   +AI++ + M       + T F+ ++
Sbjct: 476 EALRIFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALL 535

Query: 545 KKVADDGMTEEAYKLWQKLIEWK 567
           K + D  M E+A++L   + E +
Sbjct: 536 KGLRDKNMPEKAFELMDLMREGR 558



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 107/412 (25%), Positives = 181/412 (43%), Gaps = 41/412 (9%)

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
           +A  L D ++     PD   +NT+L  +   G        +         P ++TY IL+
Sbjct: 120 AARFLRDSLAAGAPPPDTSAFNTLLDALAQAGDLPGMTQLFASMRDASVRPNVVTYGILV 179

Query: 265 EQVCKQCGIARAIEVLDDMA--IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS-- 320
           + +CK   +  A+ VLD M+       PD+V  N++V+  CK G+   AV  +   +   
Sbjct: 180 KGLCKAGRVGDALSVLDGMSGPESDVCPDVVMLNNIVDGLCKTGRLQQAVKFVEERMRSV 239

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G  PN++TYN L H+    G      +++  M +   +P   T N ++ GLC  G V  
Sbjct: 240 HGCAPNTVTYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGA 299

Query: 381 AINSFNQ--MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           A+  F +   V    + + VTY+T++GA      +  A++L H +     SP  I Y T+
Sbjct: 300 ALEFFREKRTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTM 359

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG- 497
           I GL + G ++ A  +   M + G   D   +  LI GFCR  ++ EA +LL E+ + G 
Sbjct: 360 ISGLTQAGRLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGL 419

Query: 498 ---------------------------NKMRNSAYR-------LVIHGLCKSKKVDMAIQ 523
                                       KM +   R        +IHG CK  ++D A++
Sbjct: 420 QPDVYTYNTLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALR 479

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +   M  S  +P+  +++T++  +     T  A +L+ ++ E  V    TT 
Sbjct: 480 IFRSMDESGIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTF 531



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 159/353 (45%), Gaps = 6/353 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL--Q 176
           T N +   FC  G +  A +L+  M +    P+      ++ GL  + R+  A +    +
Sbjct: 248 TYNCLAHAFCRAGNVGMACELVAKMEKERVTPNAVTLNTIVGGLCWVGRVGAALEFFREK 307

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
             V      + +TY+ +VG       +  A+ L  EM   G  PD I Y T++  +   G
Sbjct: 308 RTVWPEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAG 367

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +   A        + G       Y ILI   C++  +  A E+L +M   G  PD+ TYN
Sbjct: 368 RLDDAWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYN 427

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L++  CK G +     ++  ++  G  P+ +T+ TL+H     G  D   +I   M+E+
Sbjct: 428 TLLSGLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDES 487

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P    YN LI+ LCK      AI  F++M  K+   ++ T+N +L  L  + M  +A
Sbjct: 488 GIQPNTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKA 547

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            +L+ L+    C+P  +T + L++ L   G  ++        M++  +P  +T
Sbjct: 548 FELMDLMREGRCTPDYVTIDILMEWLPVIGETDR----LKHFMQHDTTPKRMT 596



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 76/270 (28%), Positives = 124/270 (45%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           P    +  T + ++  F     +  A +L   M      PD      +I GL +  R++ 
Sbjct: 312 PEARGNAVTYSTLVGAFLHTNNVGVAMELFHEMVDEGNSPDAIMYFTMISGLTQAGRLDD 371

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  +   M  +G   D   YN+++GG C+R ++  A  LL EM  +G +PDV TYNT+L 
Sbjct: 372 AWSMATSMKKAGFQLDAKAYNILIGGFCRRKRLNEAYELLGEMKEAGLQPDVYTYNTLLS 431

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +   G F          +  GC P ++T+  LI   CK   I  A+ +   M   G  P
Sbjct: 432 GLCKAGDFLAVDELLGKMIDGGCRPSVVTFGTLIHGYCKVGQIDEALRIFRSMDESGIQP 491

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           + V YN+L++F CK      A+ + + +  + +  N  T+N LL  L  +   +   +++
Sbjct: 492 NTVIYNTLIDFLCKSRDTSLAIELFDEMREKHVPANVTTFNALLKGLRDKNMPEKAFELM 551

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           D+M E   +P   T +IL+  L   G  DR
Sbjct: 552 DLMREGRCTPDYVTIDILMEWLPVIGETDR 581


>gi|413924821|gb|AFW64753.1| hypothetical protein ZEAMMB73_344298 [Zea mays]
          Length = 698

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 209/429 (48%), Gaps = 2/429 (0%)

Query: 141 DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           +++ R     D+  C+ ++RGL    R+E+   +++     G VP  + YN+++ G C+R
Sbjct: 71  EMLVREGGADDYSTCV-MVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLIDGYCRR 129

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G I   + LL EM   G  P V+TY  I+  +   G   +      +   +G  P +  Y
Sbjct: 130 GDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIY 189

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
             +I  +CK    ++A ++L+ M     +PD+VT+N+++   C++G   +A+ ++   + 
Sbjct: 190 NTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIR 249

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           RG+EPN ++Y  L+H    RG       +L  M    H+P + T   LI+GL   G V+ 
Sbjct: 250 RGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVND 309

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+    +M  +   PD   YN ++  LCK+ ML+ A  LL  +      P    Y TLID
Sbjct: 310 ALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLID 369

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  +   +  A  ++ + ME    PD + +  +I G+C+   ++EAV  +  + K G   
Sbjct: 370 GFVRSDKLSDARKIF-EFMEEKACPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIP 428

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  ++ G  K   +  ++++L  M+  R KP+   +++++    + G T  A  L+
Sbjct: 429 DEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLF 488

Query: 561 QKLIEWKVF 569
            K+    +F
Sbjct: 489 AKMQSEGLF 497



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/424 (29%), Positives = 200/424 (47%), Gaps = 1/424 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C RG +     L+  M  +  IP       +I  L R   + K   +L  M  
Sbjct: 120 NVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRA 179

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+   YN ++  LCK      A  +L++M  S   PDV+T+NT++      G  ++
Sbjct: 180 RGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVRE 239

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   ++ +R+G  P  ++YT LI   C +     A ++L +M   G +PD++T  +L++
Sbjct: 240 ALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIH 299

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                G+ +DA++V   +  R + P++  YN L+  L  +    A   +L+ M E    P
Sbjct: 300 GLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQP 359

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             F Y  LI+G  +   +  A   F  M  K C PDIV YN ++   CK GM+ EA+  +
Sbjct: 360 DKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAYNVMIKGYCKFGMMKEAVTCM 418

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  + C P   TY TL+DG AKKG +  ++ L   MM+    P+  T+ +LI G+C  
Sbjct: 419 SSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNI 478

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
                A DL  ++   G       Y ++I  L K  KV  A    E M+ +   P+D   
Sbjct: 479 GDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATV 538

Query: 541 STIV 544
             +V
Sbjct: 539 HYLV 542



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 99/351 (28%), Positives = 179/351 (50%)

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           + G  PD    N +LR + +  ++++A G + + L +       +  +++  +C +  + 
Sbjct: 39  LHGALPDAPDCNCLLRLLVERRRWERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVE 98

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
               +++    EGC P  V YN L++  C++G     +L++  + ++G+ P  +TY  ++
Sbjct: 99  EGRGLIEARWGEGCVPGAVFYNVLIDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAII 158

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           H LG +G    V+ +L  M     SP V  YN +IN LCK     +A +  NQMV     
Sbjct: 159 HWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFN 218

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD+VT+NT++   C+EG + EAL+LL         P  ++Y  LI G   +G    A  L
Sbjct: 219 PDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDL 278

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             +MM  G +PD IT   LI G   + QV +A+ + +++ +R      + Y ++I GLCK
Sbjct: 279 LVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCK 338

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            + +  A  +LE M+  + +PD  +++T++          +A K+++ + E
Sbjct: 339 KRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEE 389



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 117/483 (24%), Positives = 200/483 (41%), Gaps = 51/483 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I+     +G LT    L+  M  R   P+      +I  L +     +AS +L  M
Sbjct: 153 TYGAIIHWLGRKGDLTKVESLLGEMRARGLSPNVQIYNTVINALCKCRSASQASDMLNQM 212

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V S   PD +T+N M+ G C+ G +R A+ LL E    G EP+ ++Y  ++      G+ 
Sbjct: 213 VKSRFNPDVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEA 272

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A     + + +G  P +IT   LI  +     +  A+ V + MA     PD   YN L
Sbjct: 273 MVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVL 332

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK+     A  ++  +L + ++P+   Y TL+             KI + M E + 
Sbjct: 333 ISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKA- 391

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +  YN++I G CK+G++  A+   + M    C PD  TY T++    K+G ++ +L+
Sbjct: 392 CPDIVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLR 451

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +    C P + TY +LI G    G    A  L+ +M   G+ P+ + +  LI    
Sbjct: 452 LLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLF 511

Query: 479 RADQVEEA--------------------------------------------------VD 488
           + D+V +A                                                  +D
Sbjct: 512 KKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLD 571

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           + + +   G   R SAY  +I  LC+   +  A+ + + M +    PD   F +++   +
Sbjct: 572 VFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKGCLPDPITFLSLLYGFS 631

Query: 549 DDG 551
             G
Sbjct: 632 SAG 634



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/385 (27%), Positives = 178/385 (46%), Gaps = 16/385 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E ++ +   ++  FC RG+   AS L+  M  R   PD      LI GL+   ++  A 
Sbjct: 252 LEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVVSGQVNDAL 311

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V + M     +PD   YN+++ GLCK+  + +A  LL+EM     +PD   Y T++   
Sbjct: 312 IVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGF 371

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + K   A   ++    K CP  ++ Y ++I+  CK   +  A+  +  M   GC PD 
Sbjct: 372 VRSDKLSDARKIFEFMEEKACPD-IVAYNVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDE 430

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY +LV+   K+G    ++ ++ +++ R  +PN  TY +L+    + G   + + +   
Sbjct: 431 FTYTTLVDGYAKKGDISASLRLLCDMMKRRCKPNIFTYASLICGYCNIGDTYSAEDLFAK 490

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL--CKE 410
           M      P V  Y +LI  L K   V +A   F  M+  +C P+  T + ++  L  C+ 
Sbjct: 491 MQSEGLFPNVVHYTVLIGSLFKKDKVIQAAAYFEHMLLNHCPPNDATVHYLVNGLVNCRH 550

Query: 411 GMLN----------EALQLLHLLNG---SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           GM+N          E   LL +  G       P +  YN +I  L +   + KAM L  +
Sbjct: 551 GMVNSNRSDTKQAHEKSALLDVFRGLISDGLDPRISAYNAIIFSLCRHNMLGKAMDLKDK 610

Query: 458 MMENGISPDDITHRTLIWGFCRADQ 482
           M   G  PD IT  +L++GF  A +
Sbjct: 611 MSNKGCLPDPITFLSLLYGFSSAGE 635



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/394 (25%), Positives = 183/394 (46%), Gaps = 7/394 (1%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E+A  +   M++  G  D  +  +MV GLC  G++     L++     GC P  + YN +
Sbjct: 63  ERARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVL 122

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G   + +    +   KG  P ++TY  +I  + ++  + +   +L +M   G 
Sbjct: 123 IDGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGL 182

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           SP++  YN+++N  CK      A  ++N ++     P+ +T+NT++      G    V +
Sbjct: 183 SPNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREG---DVRE 239

Query: 349 ILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
            L ++ EA      P   +Y  LI+G C  G    A +   +M+ +   PD++T   ++ 
Sbjct: 240 ALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIH 299

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            L   G +N+AL +   +      P    YN LI GL KK  +  A  L  +M+E  + P
Sbjct: 300 GLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKVQP 359

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D   + TLI GF R+D++ +A  + + + ++       AY ++I G CK   +  A+  +
Sbjct: 360 DKFIYTTLIDGFVRSDKLSDARKIFEFMEEKACP-DIVAYNVMIKGYCKFGMMKEAVTCM 418

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             M  +   PD+  ++T+V   A  G    + +L
Sbjct: 419 SSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRL 452



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 104/397 (26%), Positives = 181/397 (45%), Gaps = 16/397 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  FC  G + +A KL+    RR   P+      LI G         AS +L
Sbjct: 220 DVVTFNTMIAGFCREGDVREALKLLREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLL 279

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PD IT   ++ GL   GQ+  A+ + ++M+     PD   YN ++  +   
Sbjct: 280 VEMMGRGHTPDMITLGALIHGLVVSGQVNDALIVREKMAERQVMPDANIYNVLISGLCKK 339

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A    ++ L +   P    YT LI+   +   ++ A ++ + M  + C PDIV Y
Sbjct: 340 RMLSAAKNLLEEMLEQKVQPDKFIYTTLIDGFVRSDKLSDARKIFEFMEEKAC-PDIVAY 398

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N ++   CK G   +AV  ++++   G  P+  TY TL+     +G   A  ++L  M +
Sbjct: 399 NVMIKGYCKFGMMKEAVTCMSSMRKAGCIPDEFTYTTLVDGYAKKGDISASLRLLCDMMK 458

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P +FTY  LI G C  G    A + F +M S+   P++V Y  ++G+L K+  + +
Sbjct: 459 RRCKPNIFTYASLICGYCNIGDTYSAEDLFAKMQSEGLFPNVVHYTVLIGSLFKKDKVIQ 518

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAK-------------KGCMEKAMVL--YGQMME 460
           A      +  + C P   T + L++GL               K   EK+ +L  +  ++ 
Sbjct: 519 AAAYFEHMLLNHCPPNDATVHYLVNGLVNCRHGMVNSNRSDTKQAHEKSALLDVFRGLIS 578

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +G+ P    +  +I+  CR + + +A+DL  ++  +G
Sbjct: 579 DGLDPRISAYNAIIFSLCRHNMLGKAMDLKDKMSNKG 615



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 79/294 (26%), Positives = 145/294 (49%)

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
           RA  +  +M +     D  +   +V   C +G+ ++   +I      G  P ++ YN L+
Sbjct: 64  RARGLYGEMLVREGGADDYSTCVMVRGLCLEGRVEEGRGLIEARWGEGCVPGAVFYNVLI 123

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                RG       +L  M      PTV TY  +I+ L + G + +  +   +M ++   
Sbjct: 124 DGYCRRGDIGRGLLLLGEMETKGIIPTVVTYGAIIHWLGRKGDLTKVESLLGEMRARGLS 183

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P++  YNTV+ ALCK    ++A  +L+ +  S  +P ++T+NT+I G  ++G + +A+ L
Sbjct: 184 PNVQIYNTVINALCKCRSASQASDMLNQMVKSRFNPDVVTFNTMIAGFCREGDVREALKL 243

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             + +  G+ P+ +++  LI GFC   +   A DLL E+  RG+         +IHGL  
Sbjct: 244 LREAIRRGLEPNQLSYTPLIHGFCVRGEAMVASDLLVEMMGRGHTPDMITLGALIHGLVV 303

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           S +V+ A+ V E M   +  PD  +++ ++  +    M   A  L ++++E KV
Sbjct: 304 SGQVNDALIVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLEEMLEQKV 357


>gi|222623994|gb|EEE58126.1| hypothetical protein OsJ_09025 [Oryza sativa Japonica Group]
          Length = 1269

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 117/406 (28%), Positives = 200/406 (49%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL R   +E+A    + M   G VPD  TY  ++ GLCK  +   A ALLDEMS + 
Sbjct: 263 LIAGLCRSGAVEEAFGFKKDMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAE 322

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P+V+ Y  ++      G   +A    K+ +  G  P  ITY  L+  +CK   + RA 
Sbjct: 323 LKPNVVVYANLIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRAS 382

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L  M  +   PD +TYN ++    +     DA  +++ + + G+ PN  TY+ ++H L
Sbjct: 383 LLLKQMVRDSHRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGL 442

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +    +L+ M      P  F Y  LI+G C+ G V  A   F++M   N  PD+
Sbjct: 443 CQSGEPEKASDLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDL 502

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
             YN+++  L K G + E+ +    +      P   TY+ LI G  K G +E A  L  +
Sbjct: 503 YCYNSLIFGLSKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQR 562

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M++ G+ P+D+ +  L+  + ++D +E+     K +  +G  + N  Y ++IH L  S  
Sbjct: 563 MLDTGLKPNDVIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGN 622

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           ++ A +VL  +  +   PD  V+S+++  +      E+A+ +  ++
Sbjct: 623 MEAAFRVLSGIEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEM 668



 Score =  194 bits (492), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/511 (25%), Positives = 230/511 (45%), Gaps = 71/511 (13%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   G   +A K+I  M      P+     NL+RGL ++ ++++AS +L+ MV   
Sbjct: 333 LIDGFMREGNADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDS 392

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PDTITYN+++ G  +    + A  LL EM  +G  P+V TY+ ++  +  +G+ ++A 
Sbjct: 393 HRPDTITYNLIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKAS 452

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV--- 299
              ++   KG  P    Y  LI   C++  ++ A E+ D M      PD+  YNSL+   
Sbjct: 453 DLLEEMTTKGLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGL 512

Query: 300 ------------------------NFS--------CKQGKYDDAVLVINNLLSRGMEPNS 327
                                    F+         K G  + A  ++  +L  G++PN 
Sbjct: 513 SKVGRVEESTKYFAQMQERGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPND 572

Query: 328 ITY-----------------------------------NTLLHSLGSRGCWDAVDKILDI 352
           + Y                                     L+H+L S G  +A  ++L  
Sbjct: 573 VIYIDLLESYFKSDDIEKVSSTFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSG 632

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + +    P V  Y+ LI+GLCK    ++A    ++M  K   P+IV YN ++  LCK G 
Sbjct: 633 IEKNGSVPDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGD 692

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++ A  + + +      P  +TY +LIDG  K G +  A  LY +M+  GI+PD   +  
Sbjct: 693 ISYARNVFNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSV 752

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L  G   A  +E+A+ L++E+  RG+    S++  ++ G CK  K+   +++L +++   
Sbjct: 753 LTTGCSSAGDLEQAMFLIEEMFLRGHA-SISSFNNLVDGFCKRGKMQETLKLLHVIMGRG 811

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             P+      I+  +++ G   E + ++ +L
Sbjct: 812 LVPNALTIENIISGLSEAGKLSEVHTIFVEL 842



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/460 (26%), Positives = 212/460 (46%), Gaps = 22/460 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C   +  +A  L+D M+     P+     NLI G +R    ++A K++
Sbjct: 291 DGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMI 350

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV +G  P+ ITY+ +V GLCK GQ+  A  LL +M      PD ITYN I+   F +
Sbjct: 351 KEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRH 410

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              K A     +    G  P + TY+I+I  +C+     +A ++L++M  +G  P+   Y
Sbjct: 411 HSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVY 470

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L++  C++G    A  + + +    + P+   YN+L+  L   G  +   K    M E
Sbjct: 471 APLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQE 530

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK------ 409
               P  FTY+ LI+G  K G ++ A     +M+    +P+ V Y  +L +  K      
Sbjct: 531 RGLLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEK 590

Query: 410 -----EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
                + ML++ + L + +           Y  LI  L+  G ME A  +   + +NG  
Sbjct: 591 VSSTFKSMLDQGVMLDNRI-----------YGILIHNLSSSGNMEAAFRVLSGIEKNGSV 639

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD   + +LI G C+    E+A  +L E+ K+G       Y  +I GLCKS  +  A  V
Sbjct: 640 PDVHVYSSLISGLCKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNV 699

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              +++    P+   +++++      G    A+ L+ +++
Sbjct: 700 FNSILAKGLVPNCVTYTSLIDGSCKVGDISNAFYLYNEML 739



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/371 (26%), Positives = 184/371 (49%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           CK  +  +A  +L EM   GC  + +TYN ++  +  +G  ++A GF KD    G  P  
Sbjct: 233 CKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGLVPDG 292

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            TY  LI  +CK      A  +LD+M+     P++V Y +L++   ++G  D+A  +I  
Sbjct: 293 FTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFKMIKE 352

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +++ G++PN ITY+ L+  L   G  D    +L  M   SH P   TYN++I G  ++  
Sbjct: 353 MVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHFRHHS 412

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
              A    ++M +    P++ TY+ ++  LC+ G   +A  LL  +      P    Y  
Sbjct: 413 KKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAFVYAP 472

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI G  ++G +  A  ++ +M +  + PD   + +LI+G  +  +VEE+     ++ +RG
Sbjct: 473 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 532

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y  +IHG  K+  ++ A Q+++ M+ +  KP+D ++  +++        E+  
Sbjct: 533 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 592

Query: 558 KLWQKLIEWKV 568
             ++ +++  V
Sbjct: 593 STFKSMLDQGV 603



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 111/460 (24%), Positives = 209/460 (45%), Gaps = 56/460 (12%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C  G ++ A ++ D M + N +PD +   +LI GL ++ R+E+++K    M   G
Sbjct: 473 LISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQMQERG 532

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +P+  TY+ ++ G  K G + SA  L+  M  +G +P+ + Y  +L + F +   ++  
Sbjct: 533 LLPNEFTYSGLIHGYLKNGDLESAEQLVQRMLDTGLKPNDVIYIDLLESYFKSDDIEKVS 592

Query: 243 GFWKDQL-----------------------------------RKGCPPYLITYTILIEQV 267
             +K  L                                   + G  P +  Y+ LI  +
Sbjct: 593 STFKSMLDQGVMLDNRIYGILIHNLSSSGNMEAAFRVLSGIEKNGSVPDVHVYSSLISGL 652

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CK     +A  +LD+M+ +G  P+IV YN+L++  CK G    A  V N++L++G+ PN 
Sbjct: 653 CKTADREKAFGILDEMSKKGVDPNIVCYNALIDGLCKSGDISYARNVFNSILAKGLVPNC 712

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +TY +L+      G       + + M     +P  F Y++L  G    G +++A+    +
Sbjct: 713 VTYTSLIDGSCKVGDISNAFYLYNEMLATGITPDAFVYSVLTTGCSSAGDLEQAMFLIEE 772

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M  +     I ++N ++   CK G + E L+LLH++ G    P  +T   +I GL++ G 
Sbjct: 773 MFLRG-HASISSFNNLVDGFCKRGKMQETLKLLHVIMGRGLVPNALTIENIISGLSEAGK 831

Query: 448 MEKAMV-------------------LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           + +                      L+  M+  G  P D+    +I   C+   +++A+ 
Sbjct: 832 LSEVHTIFVELQQKTSESAARHFSSLFMDMINQGKIPLDVVD-DMIRDHCKEGNLDKALM 890

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           L   I  +   M  S+Y  ++  LC+  K+  A+ +L+ M
Sbjct: 891 LRDVIVAKSAPMGCSSYLAIVDNLCRKGKLSEALNLLKEM 930



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 90/302 (29%), Positives = 151/302 (50%)

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           +E  CK      A +VL +M   GC  + VTYN L+   C+ G  ++A     ++   G+
Sbjct: 229 LEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKKDMEDYGL 288

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+  TY  L++ L      +    +LD M+ A   P V  Y  LI+G  + G  D A  
Sbjct: 289 VPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREGNADEAFK 348

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              +MV+   QP+ +TY+ ++  LCK G ++ A  LL  +   S  P  ITYN +I+G  
Sbjct: 349 MIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYNLIIEGHF 408

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           +    + A  L  +M   GISP+  T+  +I G C++ + E+A DLL+E+  +G K    
Sbjct: 409 RHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTKGLKPNAF 468

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I G C+   V +A ++ + M      PD   +++++  ++  G  EE+ K + ++
Sbjct: 469 VYAPLISGYCREGNVSLACEIFDKMTKVNVLPDLYCYNSLIFGLSKVGRVEESTKYFAQM 528

Query: 564 IE 565
            E
Sbjct: 529 QE 530



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 108/398 (27%), Positives = 179/398 (44%), Gaps = 25/398 (6%)

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK--- 237
           S   PD   +  M   LC       A  LL +M  +   P V+   +I R + D+G    
Sbjct: 118 SAPAPDAFAHLAM--SLCAGSLFNLANGLLIKMIRAYPSPPVV-LASIHRALSDSGHPFA 174

Query: 238 --FKQAIGF----WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
              ++  G+    W+   R+G  P             ++ G      VL   A+EG S  
Sbjct: 175 GGARRPRGYLQEVWEGAGRRGGRPD-----------DERSGHGSQHSVLQR-AVEG-SAA 221

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
              + S +   CK  ++D A  V+  +  RG   N++TYN L+  L   G  +       
Sbjct: 222 RGRHGSALEAYCKVREFDTAKKVLVEMRERGCGLNTVTYNVLIAGLCRSGAVEEAFGFKK 281

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M +    P  FTY  LINGLCK    + A    ++M     +P++V Y  ++    +EG
Sbjct: 282 DMEDYGLVPDGFTYGALINGLCKSRRSNEAKALLDEMSCAELKPNVVVYANLIDGFMREG 341

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             +EA +++  +  +   P  ITY+ L+ GL K G M++A +L  QM+ +   PD IT+ 
Sbjct: 342 NADEAFKMIKEMVAAGVQPNKITYDNLVRGLCKMGQMDRASLLLKQMVRDSHRPDTITYN 401

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            +I G  R    ++A  LL E+   G       Y ++IHGLC+S + + A  +LE M + 
Sbjct: 402 LIIEGHFRHHSKKDAFRLLSEMENAGISPNVYTYSIMIHGLCQSGEPEKASDLLEEMTTK 461

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             KP+  V++ ++     +G    A +++ K+ +  V 
Sbjct: 462 GLKPNAFVYAPLISGYCREGNVSLACEIFDKMTKVNVL 499


>gi|302770855|ref|XP_002968846.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
 gi|300163351|gb|EFJ29962.1| hypothetical protein SELMODRAFT_90583 [Selaginella moellendorffii]
          Length = 538

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 223/443 (50%), Gaps = 4/443 (0%)

Query: 80  SESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKL 139
           S++  L   K  R    ++     +L +S G  V   E T   ++   C  G    A +L
Sbjct: 19  SQAFTLLATKLFRRSKFSEVVRLFTLLASRG--VVYGETTYKLVVDGLCGAGMANQALEL 76

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK 199
           +  ++     P       +I GL R  R+  A KVL+ MV    VP+  TY +++ GLC+
Sbjct: 77  VRELSG-VYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCR 135

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
             + + A  +  EM  +GC+P+ ITY T+++ +   G+  +A+    +Q     P  +IT
Sbjct: 136 SNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVIT 195

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
            T ++  +CK   +  A++ +++M   G  P+ VTY++LV+   + G+ D  +       
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEK 255

Query: 320 SR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           +R G    +  Y   L +L   G  D   K ++ + ++   P V TY++LIN   + G  
Sbjct: 256 ARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQF 315

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D ++     M     +PD+VTY+T++  LCKE    +A +LL L+  +   P ++TYN++
Sbjct: 316 DASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSV 375

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +DGL K G M++   +Y  M+++  SPD +T+  ++ G  +A  ++ AV L + I     
Sbjct: 376 MDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE 435

Query: 499 KMRNSAYRLVIHGLCKSKKVDMA 521
               +AY +VI  LC++ K++ A
Sbjct: 436 GPDAAAYSMVITSLCRAGKLEEA 458



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 212/421 (50%), Gaps = 39/421 (9%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+   C   ++ DA K+++ M   + +P+      L+ GL R ++ + A +V Q M  
Sbjct: 92  NGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKR 151

Query: 181 SGGVPDTITYNMM-----------------------------------VGGLCKRGQIRS 205
           +G  P+ ITY  +                                   VGGLCK  ++  
Sbjct: 152 NGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDD 211

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ-LRKGCPPYLITYTILI 264
           A+  ++EM   G  P+ +TY+ ++     +G+  + I F++++  RKG       Y   +
Sbjct: 212 ALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYL 271

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           + +CK   + RA + ++++   G  PD+VTY+ L+N   + G++D ++ ++ ++   G++
Sbjct: 272 DALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVK 331

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P+ +TY+TL++ L     +    ++L++M  A   P V TYN +++GLCK G +D     
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRV 391

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           +  M+   C PD+VTY+ ++  L K GML+ A++L  L+  S   P    Y+ +I  L +
Sbjct: 392 YEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCR 451

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRT--LIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            G +E+A  +Y   ME  ++ D+I      L+   C A++ + A  +++   +RG++M  
Sbjct: 452 AGKLEEACGMY-HGMEVTVAGDNICRALAGLVAALCDAERTDSARRIVEVASERGHRMTK 510

Query: 503 S 503
           S
Sbjct: 511 S 511



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 196/401 (48%), Gaps = 2/401 (0%)

Query: 162 LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
           L R  +  +  ++  ++   G V    TY ++V GLC  G    A+ L+ E+S     P 
Sbjct: 29  LFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELS-GVYTPT 87

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           +  YN I+  +    +   A    +  + +   P + TYTIL+  +C+      A EV  
Sbjct: 88  LFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQ 147

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +M   GC P+ +TY +L+    + G+ D+A+ V+    S  +  + IT  T++  L    
Sbjct: 148 EMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKAS 207

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ-MVSKNCQPDIVTY 400
             D   K ++ M +    P   TY+ L++G  ++G +DR I  F +    K    +   Y
Sbjct: 208 RLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAY 267

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
              L ALCK G L+ A + +  L  S   P ++TY+ LI+  A+ G  + ++ L   M  
Sbjct: 268 PGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRR 327

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           NG+ PD +T+ TLI   C+  + ++A  LL+ +   G+      Y  V+ GLCKS K+D 
Sbjct: 328 NGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDE 387

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             +V E+M+ SR  PD   +S I+  ++  GM + A KL++
Sbjct: 388 VHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFE 428



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 101/402 (25%), Positives = 194/402 (48%), Gaps = 9/402 (2%)

Query: 171 ASKVLQIMVMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           A+K+L+  V+  GV  D+  + ++   L +R +    + L   ++  G      TY  ++
Sbjct: 2   AAKLLERSVVEAGVKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G   QA+   + +L     P L  Y  +I  +C+   +  A +VL+ M  E   
Sbjct: 62  DGLCGAGMANQALELVR-ELSGVYTPTLFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++ TY  L+N  C+  K   A  V   +   G +PN ITY TL+  L   G  D   ++
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180

Query: 350 LDIMNEASHSPT-VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + I   +   PT V T   ++ GLCK   +D A+    +M     +P+ VTY+ ++    
Sbjct: 181 M-IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239

Query: 409 KEGMLNEALQLLH---LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           + G L+  ++         G S       Y   +D L K G +++A     ++ ++G+ P
Sbjct: 240 QHGELDRVIRFFEEEKARKGGSLEAA--AYPGYLDALCKAGYLDRARKSVEELRQSGVVP 297

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +T+  LI  F RA Q + +++LL+++ + G K     Y  +I+ LCK +K   A ++L
Sbjct: 298 DVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLL 357

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           ELM ++   P+   +++++  +   G  +E +++++ +++ +
Sbjct: 358 ELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 5/210 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  F   G+   + +L++ M R    PD      LI  L +  + + A ++L
Sbjct: 298 DVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLL 357

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M  +G  P+ +TYN ++ GLCK G++     + + M  S C PDV+TY+ I+  +   
Sbjct: 358 ELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKA 417

Query: 236 GKFKQAIGFWK--DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           G    A+  ++     R+G  P    Y+++I  +C+   +  A  +   M +     +I 
Sbjct: 418 GMLDSAVKLFELIKSSREG--PDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNIC 475

Query: 294 -TYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
                LV   C   + D A  ++     RG
Sbjct: 476 RALAGLVAALCDAERTDSARRIVEVASERG 505



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 72/133 (54%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T + ++   C   K  DA +L+++M      P+     +++ GL +  ++++  
Sbjct: 330 VKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVH 389

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V ++M+ S   PD +TY++++ GL K G + SA+ L + +  S   PD   Y+ ++ ++
Sbjct: 390 RVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSL 449

Query: 233 FDNGKFKQAIGFW 245
              GK ++A G +
Sbjct: 450 CRAGKLEEACGMY 462


>gi|15237575|ref|NP_198933.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75309191|sp|Q9FLL3.1|PP412_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g41170, mitochondrial; Flags: Precursor
 gi|9759163|dbj|BAB09719.1| salt-inducible protein-like [Arabidopsis thaliana]
 gi|66792708|gb|AAY56456.1| At5g41170 [Arabidopsis thaliana]
 gi|332007267|gb|AED94650.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 527

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 231/485 (47%), Gaps = 44/485 (9%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIM 178
           +IL+N     +  +A  L   M     +P   DF   +N+I  + + D +      LQIM
Sbjct: 42  EILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQIM 101

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G   D  T N+++   C+  Q   A + L +M   G EPD++T+ +++       + 
Sbjct: 102 ---GVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRM 158

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+      +  G  P ++ YT +I+ +CK   +  A+ + D M   G  PD+V Y SL
Sbjct: 159 EEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSL 218

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  C  G++ DA  ++  +  R ++P+ IT+N L+ +    G +   +++ + M   S 
Sbjct: 219 VNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSI 278

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P +FTY  LING C  G VD A   F  M +K C PD+V Y +++   CK   +++A++
Sbjct: 279 APNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMK 338

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           + + ++    +   ITY TLI G  + G    A  ++  M+  G+ P+  T+  L+   C
Sbjct: 339 IFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLC 398

Query: 479 RADQVEEAVDLLKEIGKR---GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM------- 528
              +V++A+ + +++ KR   G       Y +++HGLC + K++ A+ V E M       
Sbjct: 399 YNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDI 458

Query: 529 ----------------------------ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
                                        S   KP+   ++T++  +  +G+  EA+ L+
Sbjct: 459 GIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFREGLKHEAHVLF 518

Query: 561 QKLIE 565
           +K+ E
Sbjct: 519 RKMKE 523



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 116/387 (29%), Positives = 187/387 (48%), Gaps = 3/387 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   ++  FC   ++ +A  +++ M      PD      +I  L +   +  A  
Sbjct: 139 EPDIVTFTSLINGFCLGNRMEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALS 198

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G  PD + Y  +V GLC  G+ R A +LL  M+    +PDVIT+N ++    
Sbjct: 199 LFDQMENYGIRPDVVMYTSLVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFV 258

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GKF  A   + + +R    P + TYT LI   C +  +  A ++   M  +GC PD+V
Sbjct: 259 KEGKFLDAEELYNEMIRMSIAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVV 318

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y SL+N  CK  K DDA+ +   +  +G+  N+ITY TL+   G  G  +   ++   M
Sbjct: 319 AYTSLINGFCKCKKVDDAMKIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHM 378

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN---CQPDIVTYNTVLGALCKE 410
                 P + TYN+L++ LC  G V +A+  F  M  +      P+I TYN +L  LC  
Sbjct: 379 VSRGVPPNIRTYNVLLHCLCYNGKVKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYN 438

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G L +AL +   +        +ITY  +I G+ K G ++ A+ L+  +   G+ P+ +T+
Sbjct: 439 GKLEKALMVFEDMRKREMDIGIITYTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTY 498

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRG 497
            T+I G  R     EA  L +++ + G
Sbjct: 499 TTMISGLFREGLKHEAHVLFRKMKEDG 525



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 202/405 (49%), Gaps = 3/405 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V +D  T N ++  FC   +   AS  +  M +    PD     +LI G    +R+E+A 
Sbjct: 103 VSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNRMEEAM 162

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PD + Y  ++  LCK G +  A++L D+M   G  PDV+ Y +++  +
Sbjct: 163 SMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTSLVNGL 222

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            ++G+++ A    +   ++   P +IT+  LI+   K+     A E+ ++M     +P+I
Sbjct: 223 CNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMSIAPNI 282

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY SL+N  C +G  D+A  +   + ++G  P+ + Y +L++        D   KI   
Sbjct: 283 FTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAMKIFYE 342

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M++   +    TY  LI G  + G  + A   F+ MVS+   P+I TYN +L  LC  G 
Sbjct: 343 MSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGVPPNIRTYNVLLHCLCYNGK 402

Query: 413 LNEALQLLHLLNG---SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           + +AL +   +        +P + TYN L+ GL   G +EKA++++  M +  +    IT
Sbjct: 403 VKKALMIFEDMQKREMDGVAPNIWTYNVLLHGLCYNGKLEKALMVFEDMRKREMDIGIIT 462

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +  +I G C+A +V+ AV+L   +  +G K     Y  +I GL +
Sbjct: 463 YTIIIQGMCKAGKVKNAVNLFCSLPSKGVKPNVVTYTTMISGLFR 507



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 97/346 (28%), Positives = 170/346 (49%), Gaps = 4/346 (1%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  ILR    + +F +A+  +   +     P +I +T L+  + K       I + D + 
Sbjct: 40  YREILRNGLHSLQFNEALDLFTHMVESRPLPSIIDFTKLLNVIAKMKKFDVVINLCDHLQ 99

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS--LGSRGC 342
           I G S D+ T N L+N  C+  +   A   +  ++  G EP+ +T+ +L++   LG+R  
Sbjct: 100 IMGVSHDLYTCNLLMNCFCQSSQPYLASSFLGKMMKLGFEPDIVTFTSLINGFCLGNR-- 157

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            +    +++ M E    P V  Y  +I+ LCK G V+ A++ F+QM +   +PD+V Y +
Sbjct: 158 MEEAMSMVNQMVEMGIKPDVVMYTTIIDSLCKNGHVNYALSLFDQMENYGIRPDVVMYTS 217

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LC  G   +A  LL  +      P +IT+N LID   K+G    A  LY +M+   
Sbjct: 218 LVNGLCNSGRWRDADSLLRGMTKRKIKPDVITFNALIDAFVKEGKFLDAEELYNEMIRMS 277

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           I+P+  T+ +LI GFC    V+EA  +   +  +G      AY  +I+G CK KKVD A+
Sbjct: 278 IAPNIFTYTSLINGFCMEGCVDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVDDAM 337

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++   M       +   ++T+++     G    A +++  ++   V
Sbjct: 338 KIFYEMSQKGLTGNTITYTTLIQGFGQVGKPNVAQEVFSHMVSRGV 383


>gi|414591648|tpg|DAA42219.1| TPA: PPR-814b [Zea mays]
          Length = 827

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 207/414 (50%), Gaps = 3/414 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-A 208
           P  H    L+    R  R E A      ++ +G   + I  N ++ G C+  +   A+  
Sbjct: 122 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 181

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQ 266
           LL      GC PDV +Y+ +L+++ D GK  QA    +     G  C P ++ Y  +I+ 
Sbjct: 182 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 241

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
             K+  + +A ++  +M   G  PD+VTYNS+V+  CK    D A   +  ++++ + PN
Sbjct: 242 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 301

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           + TYN L++   S G W    ++   M   S  P V T ++L+  LCKYG +  A + F+
Sbjct: 302 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 361

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M  K   PD+ +YN +L     +G L +   L  L+ G   +P   T+N LI   A  G
Sbjct: 362 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 421

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            ++KAM+++ +M ++G+ PD +T+RT+I   CR  ++++A++   ++  +G      AY 
Sbjct: 422 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 481

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            +I G C    +  A +++  ++++    D   FS+I+  +   G   +A  ++
Sbjct: 482 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 535



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 229/478 (47%), Gaps = 37/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +L++ C +GK   A  L+ +MA    +  P+      +I G  +   + KA  + + MV 
Sbjct: 201 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 260

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TYN +V  LCK   +  A A L +M      P+  TYN ++      G++K+
Sbjct: 261 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 320

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +K+  R    P ++T ++L+  +CK   I  A +V D MA++G +PD+ +YN ++N
Sbjct: 321 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 380

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +G   D   + + +L  G+ P+  T+N L+ +  + G  D    I + M +    P
Sbjct: 381 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 440

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP------------------------- 395
            V TY  +I  LC+ G +D A+  FNQM+ +   P                         
Sbjct: 441 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 500

Query: 396 ----------DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                     DIV +++++  LCK G + +A  +  L       P  + Y+ L+DG    
Sbjct: 501 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLV 560

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G MEKA+ ++  M+  GI P+ + + TL+ G+C+  +++E + L +E+ +RG K     Y
Sbjct: 561 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 620

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            ++I GL ++ +   A      M  S    D   ++ +++ +  +   +EA  L+++L
Sbjct: 621 SIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 678



 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/445 (25%), Positives = 220/445 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  + S G+  +A ++   M R + +PD      L+  L +  +I++A  V   M
Sbjct: 304 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 363

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            M G  PD  +YN+M+ G   +G +     L D M   G  PD  T+N +++   + G  
Sbjct: 364 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 423

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + +    G  P ++TY  +I  +C+   +  A+E  + M  +G +PD   YN L
Sbjct: 424 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 483

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C  G    A  +I+ +++ GM  + + +++++++L   G       I D+      
Sbjct: 484 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 543

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    Y++L++G C  G +++A+  F+ MVS   +P++V Y T++   CK G ++E L 
Sbjct: 544 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 603

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P  I Y+ +IDGL + G    A + + +M E+GI+ D  T+  ++ G  
Sbjct: 604 LFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLF 663

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +    +EA+ L KE+     K+       +I G+ ++++V+ A  +   +  SR  P+  
Sbjct: 664 KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVV 723

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            +S ++  +  +G+ EEA  ++  +
Sbjct: 724 TYSIMITNLIKEGLVEEAEDMFSSM 748



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 213/433 (49%), Gaps = 2/433 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKV 174
           D  T + ++ + C  GK+ +A  + D MA + Q PD F + I ++ G      +   + +
Sbjct: 336 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI-MLNGYATKGCLVDMTDL 394

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             +M+  G  PD  T+N+++      G +  A+ + +EM   G +PDV+TY T++  +  
Sbjct: 395 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 454

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK   A+  +   + +G  P    Y  LI+  C    + +A E++ ++   G   DIV 
Sbjct: 455 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 514

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           ++S++N  CK G+  DA  + +  ++ G+ P+++ Y+ L+      G  +   ++ D M 
Sbjct: 515 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 574

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            A   P V  Y  L+NG CK G +D  ++ F +M+ +  +P  + Y+ ++  L + G   
Sbjct: 575 SAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 634

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A    H +  S  +  + TYN ++ GL K  C ++A+ L+ ++    +  + IT  T+I
Sbjct: 635 PAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 694

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G  +  +VEEA DL   I +         Y ++I  L K   V+ A  +   M ++  +
Sbjct: 695 DGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 754

Query: 535 PDDTVFSTIVKKV 547
           P+  + + +V+++
Sbjct: 755 PNSRLLNHVVREL 767



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 101/412 (24%), Positives = 196/412 (47%), Gaps = 5/412 (1%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T N +++ + + G L  A  + + M      PD      +I  L RI +++
Sbjct: 400 GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 459

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A +    M+  G  PD   YN ++ G C  G +  A  L+ E+  +G   D++ +++I+
Sbjct: 460 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 519

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G+   A   +   +  G  P  + Y++L++  C    + +A+ V D M   G  
Sbjct: 520 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 579

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++V Y +LVN  CK G+ D+ + +   +L RG++P++I Y+ ++  L   G        
Sbjct: 580 PNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKMK 639

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M E+  +  + TYNI++ GL K    D AI  F ++ + N + +I+T NT++  + +
Sbjct: 640 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 699

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              + EA  L   ++ S   P ++TY+ +I  L K+G +E+A  ++  M   G  P+   
Sbjct: 700 TRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 759

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI-----HGLCKSK 516
              ++    + +++  A   L +I +R   + +    L++      G C+ +
Sbjct: 760 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQ 811



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 83/378 (21%), Positives = 167/378 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T   ++   C  GK+ DA +  + M  +   PD +    LI+G      + KA 
Sbjct: 438 VKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAK 497

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +++  ++ +G   D + ++ ++  LCK G++  A  + D     G  PD + Y+ ++   
Sbjct: 498 ELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGY 557

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK ++A+  +   +  G  P ++ Y  L+   CK   I   + +  +M   G  P  
Sbjct: 558 CLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPST 617

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + Y+ +++   + G+   A +  + +   G+  +  TYN +L  L    C+D    +   
Sbjct: 618 ILYSIIIDGLFQAGRTVPAKMKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKE 677

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +   +    + T N +I+G+ +   V+ A + F  +      P++VTY+ ++  L KEG+
Sbjct: 678 LRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPNVVTYSIMITNLIKEGL 737

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA  +   +  + C P     N ++  L KK  + +A     ++ E   S + +T   
Sbjct: 738 VEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAML 797

Query: 473 LIWGFCRADQVEEAVDLL 490
           L+  F       E +  L
Sbjct: 798 LVDLFSSKGTCREQIRFL 815



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 3/220 (1%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SPT  TY IL++   +    + A+  F Q++    + +I+  N +L   C+    +EAL 
Sbjct: 121 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 180

Query: 419 -LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI--SPDDITHRTLIW 475
            LLH      C P + +Y+ L+  L  +G   +A  L   M E G   SP+ + + T+I 
Sbjct: 181 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 240

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GF +   V +A DL KE+ +RG       Y  V+H LCK++ +D A   L  M++ R  P
Sbjct: 241 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 300

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           ++  ++ ++   +  G  +EA ++++++    +     TL
Sbjct: 301 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 340


>gi|357115764|ref|XP_003559656.1| PREDICTED: protein Rf1, mitochondrial-like [Brachypodium
           distachyon]
          Length = 867

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 112/452 (24%), Positives = 224/452 (49%), Gaps = 1/452 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ DE T   ++  +   G+  +A+K+   M R   IPD     +L+  L +  R ++A+
Sbjct: 338 IQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAA 397

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   +   G  PD I+Y++++ G    G+      L   M+ +G   D   +N ++   
Sbjct: 398 EIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAH 457

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A+  + +   +G  P ++TY  +I  +C+   +A A+E L  M   G  P+ 
Sbjct: 458 AKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNT 517

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGM-EPNSITYNTLLHSLGSRGCWDAVDKILD 351
           V Y+SL+   C  G    A  +++ ++ +G+  PN   +++++HSL + G       + +
Sbjct: 518 VVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFN 577

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           ++      P +FT+N LI+G C  G +D+A    + MVS   +PD+VTY+T++    K G
Sbjct: 578 LVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSG 637

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            +++ L L   +      P  +TY+ ++DGL + G    A  ++ +M+E+G +    T+ 
Sbjct: 638 RIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYT 697

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            ++ G CR +  +EA+ L  ++G    K   +    +IH L K K+ + A  +   + +S
Sbjct: 698 IILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIHALYKVKRREEAHDLFASVSAS 757

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              P+ + +  ++  +  +G  EEA  ++  +
Sbjct: 758 GLVPNASTYGVMIINLLKEGSVEEADIMFSSM 789



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 230/485 (47%), Gaps = 57/485 (11%)

Query: 146 RNQIPDF--HFCINLIRGLIRIDRI----------------EKASKVLQIMVMSGGVPDT 187
           R + PD    F   L+R  +R D I                E  S +L  M   G VPD 
Sbjct: 177 RARRPDLGPAFFARLLRAGLRTDGIVTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDA 236

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            +YN ++  LC   + + A+ +L  M+   GC PDV++Y  ++  +F  G+  +A   + 
Sbjct: 237 FSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFN 296

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL-------------------------- 280
           + ++KG  P ++TY  ++  +CK   + +A  VL                          
Sbjct: 297 EMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLG 356

Query: 281 ---------DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
                     +M  EG  PDIVT+NSL++  CK  +  +A  + +++ ++G +P+ I+Y+
Sbjct: 357 RWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYS 416

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            LLH   + G +  ++ +   M +         +NILIN   K G++D A+  F +M  +
Sbjct: 417 ILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQ 476

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              P++VTY TV+ ALC+ G L +A++ L  +      P  + Y++LI G    G + KA
Sbjct: 477 GVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKA 536

Query: 452 MVLYGQMMENGISPDDIT-HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
             L  +MM+ GI   +IT   ++I   C   +V  A D+   +   G++     +  +I 
Sbjct: 537 KELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLID 596

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFE 570
           G C   K+D A  VL+ M+S+  +PD   +ST++      G  ++   L+++++  +V  
Sbjct: 597 GYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRV-- 654

Query: 571 KGTTL 575
           K TT+
Sbjct: 655 KPTTV 659



 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 109/446 (24%), Positives = 227/446 (50%), Gaps = 1/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C    +  A  ++  M   +  PD      +I G   + R ++A+K+ + M
Sbjct: 309 TYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEM 368

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +PD +T+N ++  LCK  + + A  +   ++  G +PD+I+Y+ +L      G+F
Sbjct: 369 TREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRF 428

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
                 +      G       + ILI    K+  +  A+ +  +M  +G SP++VTY ++
Sbjct: 429 VDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATV 488

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEAS 357
           +   C+ G+  DA+  ++ ++S G++PN++ Y++L+    + G    A + + ++M++  
Sbjct: 489 IAALCRMGRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGI 548

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P +  ++ +I+ LC  G V  A + FN ++    +PDI T+N+++   C  G +++A 
Sbjct: 549 PRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAF 608

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L  +  +   P ++TY+TLI+G  K G ++  ++L+ +M+   + P  +T+  ++ G 
Sbjct: 609 GVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGL 668

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            RA +   A  +  E+ + G  M  S Y +++ GLC++   D AI +   + +   K + 
Sbjct: 669 FRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEI 728

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
            + +T++  +      EEA+ L+  +
Sbjct: 729 AILNTMIHALYKVKRREEAHDLFASV 754



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 128/486 (26%), Positives = 237/486 (48%), Gaps = 39/486 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKV 174
           D  + N ++++ C   +  +A  ++  M + +   PD      +I GL     I KA  +
Sbjct: 235 DAFSYNTVIKSLCGGSRSQEALDMLLRMTKGDGCSPDVVSYTMVIHGLFMEGEISKACNL 294

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              MV  G VP+ +TYN +V  LCK   +  A  +L +M  +  +PD +TY  ++     
Sbjct: 295 FNEMVQKGVVPNVVTYNSIVHALCKARAMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSC 354

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G++K+A   +K+  R+G  P ++T+  L++ +CK      A E+   +A +G  PDI++
Sbjct: 355 LGRWKEAAKMFKEMTREGLIPDIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIIS 414

Query: 295 Y-----------------------------------NSLVNFSCKQGKYDDAVLVINNLL 319
           Y                                   N L+N   K+G  D+A+L+   + 
Sbjct: 415 YSILLHGYATEGRFVDMNNLFHSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMR 474

Query: 320 SRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
            +G+ PN +TY T++ +L   G   DA++K L  M      P    Y+ LI G C +G +
Sbjct: 475 GQGVSPNVVTYATVIAALCRMGRLADAMEK-LSQMISIGLKPNTVVYHSLIQGFCTHGDL 533

Query: 379 DRAINSFNQMVSKNC-QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            +A    ++M+ +   +P+I  +++++ +LC EG +  A  + +L+      P + T+N+
Sbjct: 534 IKAKELVSEMMDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNS 593

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LIDG    G M+KA  +   M+  G  PD +T+ TLI G+ ++ ++++ + L +E+  + 
Sbjct: 594 LIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKR 653

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K     Y LV+ GL ++ +   A ++   MI S      + ++ I++ +  +  T+EA 
Sbjct: 654 VKPTTVTYSLVLDGLFRAGRTSAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAI 713

Query: 558 KLWQKL 563
            L+ KL
Sbjct: 714 TLFHKL 719



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/437 (25%), Positives = 203/437 (46%), Gaps = 1/437 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++ + C   +  +A+++   +A +   PD      L+ G     R    + + 
Sbjct: 376 DIVTFNSLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLF 435

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +G V D+  +N+++    KRG +  A+ +  EM   G  P+V+TY T++  +   
Sbjct: 436 HSMTDNGIVADSHCFNILINAHAKRGMMDEALLIFTEMRGQGVSPNVVTYATVIAALCRM 495

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS-PDIVT 294
           G+   A+      +  G  P  + Y  LI+  C    + +A E++ +M  +G   P+I  
Sbjct: 496 GRLADAMEKLSQMISIGLKPNTVVYHSLIQGFCTHGDLIKAKELVSEMMDQGIPRPNITF 555

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           ++S+++  C +G+  +A  V N ++  G  P+  T+N+L+      G  D    +LD M 
Sbjct: 556 FSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMV 615

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            A   P V TY+ LING  K G +D  +  F +M+ K  +P  VTY+ VL  L + G  +
Sbjct: 616 SAGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTS 675

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A ++ H +  S  +  + TY  ++ GL +  C ++A+ L+ ++    +  +     T+I
Sbjct: 676 AAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMI 735

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
               +  + EEA DL   +   G     S Y ++I  L K   V+ A  +   M  +   
Sbjct: 736 HALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCA 795

Query: 535 PDDTVFSTIVKKVADDG 551
           P   + + I++ +   G
Sbjct: 796 PSSRLLNDIIRMLLQKG 812



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 144/299 (48%), Gaps = 7/299 (2%)

Query: 274 ARAIEVLDDMAIEGCSPDIV-----TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           A A+ + + +  E   P +V     TY  L++  C+  + D        LL  G+  + I
Sbjct: 142 ALAVALFNRICREEAGPRVVPLTVHTYGILMDCCCRARRPDLGPAFFARLLRAGLRTDGI 201

Query: 329 TYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
             NT L  L  ++   +A+  +L  M+E    P  F+YN +I  LC       A++   +
Sbjct: 202 VTNTFLKCLCYAKRTDEALSMLLHRMSELGCVPDAFSYNTVIKSLCGGSRSQEALDMLLR 261

Query: 388 MVSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           M   + C PD+V+Y  V+  L  EG +++A  L + +      P ++TYN+++  L K  
Sbjct: 262 MTKGDGCSPDVVSYTMVIHGLFMEGEISKACNLFNEMVQKGVVPNVVTYNSIVHALCKAR 321

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            M+KA ++  QM +N I PD++T+  +I G+    + +EA  + KE+ + G       + 
Sbjct: 322 AMDKAELVLRQMFDNSIQPDEVTYTAMIHGYSCLGRWKEAAKMFKEMTREGLIPDIVTFN 381

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++  LCK K+   A ++   + +  +KPD   +S ++   A +G   +   L+  + +
Sbjct: 382 SLMDSLCKHKRSKEAAEIFHSIATKGHKPDIISYSILLHGYATEGRFVDMNNLFHSMTD 440



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 90/362 (24%), Positives = 166/362 (45%), Gaps = 46/362 (12%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDA----SKLIDIMARRNQIPDFHFCINLIRGLIRI 165
           G  V  +  T   ++   C  G+L DA    S++I I  + N +  +H   +LI+G    
Sbjct: 475 GQGVSPNVVTYATVIAALCRMGRLADAMEKLSQMISIGLKPNTVV-YH---SLIQGFCTH 530

Query: 166 DRIEKASKVLQIMVMSGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
             + KA +++  M M  G+P  +   ++ ++  LC  G++ +A  + + +   G  PD+ 
Sbjct: 531 GDLIKAKELVSEM-MDQGIPRPNITFFSSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIF 589

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           T+N+++      GK  +A G     +  G  P ++TY+ LI                   
Sbjct: 590 TFNSLIDGYCLVGKMDKAFGVLDAMVSAGTEPDVVTYSTLI------------------- 630

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
                           N   K G+ DD +++   +L + ++P ++TY+ +L  L   G  
Sbjct: 631 ----------------NGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRT 674

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
            A  K+   M E+  + ++ TY I++ GLC+    D AI  F+++ + N + +I   NT+
Sbjct: 675 SAAKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTM 734

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + AL K     EA  L   ++ S   P   TY  +I  L K+G +E+A +++  M + G 
Sbjct: 735 IHALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGC 794

Query: 464 SP 465
           +P
Sbjct: 795 AP 796



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/300 (21%), Positives = 141/300 (47%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + I+ + C+ G++ +A  + +++      PD     +LI G   + +++KA  VL  MV 
Sbjct: 557 SSIIHSLCNEGRVMNAQDVFNLVIHIGDRPDIFTFNSLIDGYCLVGKMDKAFGVLDAMVS 616

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PD +TY+ ++ G  K G+I   + L  EM     +P  +TY+ +L  +F  G+   
Sbjct: 617 AGTEPDVVTYSTLINGYFKSGRIDDGLILFREMLCKRVKPTTVTYSLVLDGLFRAGRTSA 676

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + +  G    + TYTI+++ +C+      AI +   +       +I   N++++
Sbjct: 677 AKKMFHEMIESGTAMSISTYTIILQGLCRNNCTDEAITLFHKLGAMNLKFEIAILNTMIH 736

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K  + ++A  +  ++ + G+ PN+ TY  ++ +L   G  +  D +   M +   +P
Sbjct: 737 ALYKVKRREEAHDLFASVSASGLVPNASTYGVMIINLLKEGSVEEADIMFSSMEKTGCAP 796

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +    N +I  L + G + +A    +++       +  T + ++     +G   E ++ L
Sbjct: 797 SSRLLNDIIRMLLQKGEIVKAGYYMSKVDGTIISLEASTTSLLISLFASKGRYREQIKFL 856


>gi|414869870|tpg|DAA48427.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
 gi|414869871|tpg|DAA48428.1| TPA: hypothetical protein ZEAMMB73_860756 [Zea mays]
          Length = 741

 Score =  199 bits (506), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 213/447 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G L  A + +  + R    PD H   + + G  R      A ++  +M
Sbjct: 76  TYTTLINAYCHAGDLPAAKRHLSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLM 135

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G      TY  ++ GLC  G +R A+A+   M   GC PD   Y+ ++  +   G+ 
Sbjct: 136 PQRGCARTPFTYAALLQGLCGAGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRA 195

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+    D + KG  P +  Y  LI+  C    +  AI++   M  +GC P++ TY  L
Sbjct: 196 GEAVALLTDAMGKGFVPNVAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQL 255

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK GK + A+++ + ++  G+ PN +TY TL+    S G  +   ++L  M     
Sbjct: 256 ICGFCKSGKVERAMVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGL 315

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P  +T  +LI+ LCK+G ++ A      +V K  + + V Y +++ ALCK G  + A  
Sbjct: 316 APNEWTCLVLIDALCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHN 375

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +      P    Y++LIDGL ++  + +A+ L   M+E+G+  + +    LI    
Sbjct: 376 LMQKIITEGFVPDAHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHL 435

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  + +    +   +   G K     Y + I   C+  +++ A  ++  MI    +P+ T
Sbjct: 436 REFRSDSPKMISDRMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLT 495

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++T++K  A+ G+  +A+   + +I+
Sbjct: 496 TYNTLIKGYANLGLVSQAFSSLKNMID 522



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 120/460 (26%), Positives = 217/460 (47%), Gaps = 5/460 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D       +  +C  G    A +L  +M +R           L++GL     + +A  V 
Sbjct: 108 DSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVREAMAVF 167

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  PD+  Y++MV GLC  G+   A+ALL +    G  P+V  YN ++      
Sbjct: 168 AGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALIDGYCST 227

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  + AI  +K    KGC P + TYT LI   CK   + RA+ +   M   G +P++VTY
Sbjct: 228 GDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAPNVVTY 287

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L+   C +G  + A  +++++ + G+ PN  T   L+ +L   G  +   + L  + +
Sbjct: 288 TTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSLVQ 347

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                    Y  +I+ LCK G  D A N   +++++   PD   Y++++  LC+E  L E
Sbjct: 348 KGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKLLE 407

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ LL+ +  S      + +  LID   ++   +   ++  +M   G+ PD +T+   I 
Sbjct: 408 AISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVFIR 467

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            +C+  ++E+A  ++ ++   G +   + Y  +I G      V  A   L+ MI +  KP
Sbjct: 468 SYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGCKP 527

Query: 536 DDTVFST----IVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           +D  ++     ++KK +   +  ++  LW K+++ KV E+
Sbjct: 528 NDESYTVLLGLLLKKNSYHDLVADSISLW-KIVDMKVLEE 566



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/454 (25%), Positives = 198/454 (43%), Gaps = 4/454 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L      G L+D   L   M  RN     H    LI        +  A + L  ++ 
Sbjct: 47  NTLLMALARHGMLSDMESLAARMPVRN----LHTYTTLINAYCHAGDLPAAKRHLSSLLR 102

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PD+  Y   V G C+ G    A  L   M   GC     TY  +L+ +   G  ++
Sbjct: 103 AGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCGAGMVRE 162

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +      GC P    Y+I++  +C       A+ +L D   +G  P++  YN+L++
Sbjct: 163 AMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVALLTDAMGKGFVPNVAVYNALID 222

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G  + A+ +   + S+G  PN  TY  L+      G  +    +   M EA  +P
Sbjct: 223 GYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERAMVLYSRMIEAGLAP 282

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY  LI G C  G ++ A    + M +    P+  T   ++ ALCK G + EA Q L
Sbjct: 283 NVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFL 342

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             L         + Y ++ID L K G  + A  L  +++  G  PD   + +LI G CR 
Sbjct: 343 GSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRE 402

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           +++ EA+ LL ++ + G +     + ++I    +  + D    + + M ++  KPD   +
Sbjct: 403 NKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTY 462

Query: 541 STIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +  ++    DG  E+A  +  ++I+  V    TT
Sbjct: 463 TVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTT 496



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/505 (22%), Positives = 213/505 (42%), Gaps = 52/505 (10%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           FV N     N ++  +CS G L  A  +   M  +  +P+      LI G  +  ++E+A
Sbjct: 210 FVPN-VAVYNALIDGYCSTGDLELAIDIFKGMQSKGCLPNVRTYTQLICGFCKSGKVERA 268

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M+ +G  P+ +TY  ++ G C  G +  A  LL  M   G  P+  T   ++  
Sbjct: 269 MVLYSRMIEAGLAPNVVTYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDA 328

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  +G+ ++A  F    ++KG     + YT +I+ +CK      A  ++  +  EG  PD
Sbjct: 329 LCKHGRIEEAQQFLGSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPD 388

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLL-------------------------------- 319
              Y+SL++  C++ K  +A+ ++N+++                                
Sbjct: 389 AHMYSSLIDGLCRENKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISD 448

Query: 320 ---SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
              + G++P+ +TY   + S    G  +  + ++  M +    P + TYN LI G    G
Sbjct: 449 RMAAAGVKPDVVTYTVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLG 508

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL----------------QLL 420
           LV +A +S   M+   C+P+  +Y  +LG L K+   ++ +                +LL
Sbjct: 509 LVSQAFSSLKNMIDNGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELL 568

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    CS     Y+  I  L+K   +E+A      M    ++P +  +  +I    R 
Sbjct: 569 EEVIKLQCSSASYVYDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRM 628

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             ++EA+  L  + KR    R  +YR +I  LC+      A  +   ++S  Y  D+  +
Sbjct: 629 KLLKEALRFLDSMVKRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAW 688

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
             ++  +   G T +  +L   + E
Sbjct: 689 KILIDGLLQKGNTADCSRLLSFMEE 713



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 104/438 (23%), Positives = 181/438 (41%), Gaps = 51/438 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++Q  CS G L  A +L+  M      P+   C+ LI  L +  RIE+A + L  +
Sbjct: 286 TYTTLIQGQCSEGHLEHAFRLLHSMEACGLAPNEWTCLVLIDALCKHGRIEEAQQFLGSL 345

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G   + + Y  M+  LCK G+   A  L+ ++   G  PD   Y++++  +    K 
Sbjct: 346 VQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRENKL 405

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +AI    D +  G     + +TILI++  ++        + D MA  G  PD+VTY   
Sbjct: 406 LEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTYTVF 465

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL----------------LHSLGSRGC 342
           +   C+ G+ +DA  ++  ++  G+ PN  TYNTL                L ++   GC
Sbjct: 466 IRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMIDNGC 525

Query: 343 ------------------------------WDAVD-KILDIMNEA----SHSPTVFTYNI 367
                                         W  VD K+L+ + E       S   + Y+ 
Sbjct: 526 KPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYVYDC 585

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
            I  L K   ++ A +    M S N  P    Y  ++    +  +L EAL+ L  +   +
Sbjct: 586 FIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMVKRN 645

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P L +Y  +I  L ++G    A  ++G ++    + D+I  + LI G  +     +  
Sbjct: 646 YLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTADCS 705

Query: 488 DLLKEIGKRGNKMRNSAY 505
            LL  + ++  +  ++ Y
Sbjct: 706 RLLSFMEEQNCRPGSAIY 723



 Score =  115 bits (288), Expect = 6e-23,   Method: Compositional matrix adjust.
 Identities = 93/396 (23%), Positives = 162/396 (40%), Gaps = 20/396 (5%)

Query: 110 GPFVENDEKTNNKI----LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRI 165
           G  V+   K N  I    +   C  GK   A  L+  +     +PD H   +LI GL R 
Sbjct: 343 GSLVQKGIKVNQVIYTSMIDALCKSGKFDGAHNLMQKIITEGFVPDAHMYSSLIDGLCRE 402

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           +++ +A  +L  M+ SG   + + + +++    +  +  S   + D M+ +G +PDV+TY
Sbjct: 403 NKLLEAISLLNDMIESGVQANAVPFTILIDKHLREFRSDSPKMISDRMAAAGVKPDVVTY 462

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
              +R+   +G+ + A       +  G  P L TY  LI+       +++A   L +M  
Sbjct: 463 TVFIRSYCQDGRMEDAESMMIQMIDHGVRPNLTTYNTLIKGYANLGLVSQAFSSLKNMID 522

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVL------------VINNLLSRGME----PNSIT 329
            GC P+  +Y  L+    K+  Y D V             V+  LL   ++      S  
Sbjct: 523 NGCKPNDESYTVLLGLLLKKNSYHDLVADSISLWKIVDMKVLEELLEEVIKLQCSSASYV 582

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y+  +  L      +     L  M  A+ +P+   Y  +I    +  L+  A+   + MV
Sbjct: 583 YDCFIRCLSKVDRLEEAKSFLVGMQSANLTPSEDVYTCMIECCYRMKLLKEALRFLDSMV 642

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +N  P + +Y  ++ ALC+EG  + A  +   +     +   I +  LIDGL +KG   
Sbjct: 643 KRNYLPRLESYRFIICALCEEGSFHTAKSIFGDILSKEYNRDEIAWKILIDGLLQKGNTA 702

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               L   M E    P    +  L        + +E
Sbjct: 703 DCSRLLSFMEEQNCRPGSAIYSRLTGEITVTSEAQE 738



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 46/165 (27%), Positives = 71/165 (43%), Gaps = 4/165 (2%)

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P I   NT+L AL + GML++   L   +   +    L TY TLI+     G +  A   
Sbjct: 41  PPIRCLNTLLMALARHGMLSDMESLAARMPVRN----LHTYTTLINAYCHAGDLPAAKRH 96

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              ++  G++PD   + + + G+CR      A  L   + +RG       Y  ++ GLC 
Sbjct: 97  LSSLLRAGLAPDSHAYTSFVLGYCRTGLFAHACRLFLLMPQRGCARTPFTYAALLQGLCG 156

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +  V  A+ V   M      PD  V+S +V  +   G   EA  L
Sbjct: 157 AGMVREAMAVFAGMWPDGCAPDSHVYSIMVHGLCGAGRAGEAVAL 201


>gi|356554658|ref|XP_003545661.1| PREDICTED: pentatricopeptide repeat-containing protein At1g22960,
           mitochondrial-like [Glycine max]
          Length = 675

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/497 (26%), Positives = 231/497 (46%), Gaps = 71/497 (14%)

Query: 143 MARRNQIPDFHFCINLIRGLI-RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           M  +  +PD   C  ++R L  R   I+ A +V  +MV  G  P  +TYN M+   CK+G
Sbjct: 145 MVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYNTMLDSFCKQG 204

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR----------- 250
           +++ A+ LL +M   GC P+ +TYN ++  +  +G+ +QA    ++ LR           
Sbjct: 205 KVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYD 264

Query: 251 ------------------------KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
                                   +G  P L+TY  ++  +CK   ++ A ++LD M  +
Sbjct: 265 PLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNK 324

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
              PD+V+YN+L+    + G   +A L+   L  RG+ P+ +TYNTL+  L   G  D  
Sbjct: 325 NLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVA 384

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            ++ D M +    P VFT+ IL+ G CK G +  A   F++M+++  QPD   Y T +  
Sbjct: 385 MRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVG 444

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
             K G  ++A  +   +      P LITYN  IDGL K G +++A  L  +M+ NG+ PD
Sbjct: 445 ELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPD 504

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH---------------- 510
            +T+ ++I     A  + +A  +  E+  +G       Y ++IH                
Sbjct: 505 HVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFF 564

Query: 511 -------------------GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
                              GLCK +K+D A +    M +    P+   ++ ++ +  + G
Sbjct: 565 EMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLG 624

Query: 552 MTEEAYKLWQKLIEWKV 568
             +EA +L++ +++ ++
Sbjct: 625 HWQEALRLYKDMLDREI 641



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 118/435 (27%), Positives = 211/435 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T N ++      G+L  A +LI  M R       +    LIRG     ++++AS++ 
Sbjct: 224 NDVTYNVLVNGLSHSGELEQAKELIQEMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLG 283

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G VP  +TYN ++ GLCK G++  A  LLD M      PD+++YNT++      
Sbjct: 284 EEMLSRGAVPTLVTYNTIMYGLCKWGRVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRL 343

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   + +   +G  P ++TY  LI+ +C+   +  A+ + D+M   G  PD+ T+
Sbjct: 344 GNIGEAFLLFAELRFRGLVPSVVTYNTLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTF 403

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             LV   CK G    A  + + +L+RG++P+   Y T +      G       + + M  
Sbjct: 404 TILVRGFCKLGNLPMAKELFDEMLNRGLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLA 463

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + TYN+ I+GL K G +  A     +M+     PD VTY +++ A    G L +
Sbjct: 464 RGFPPDLITYNVFIDGLHKLGNLKEASELVKKMLYNGLVPDHVTYTSIIHAHLMAGHLRK 523

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  +   +      P ++TY  LI   A +G ++ A++ + +M E G+ P+ IT+  LI 
Sbjct: 524 ARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGRLKLAILHFFEMHEKGVHPNVITYNALIN 583

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  ++++A     E+  +G       Y ++I+  C       A+++ + M+    +P
Sbjct: 584 GLCKVRKMDQAYKFFTEMQAKGISPNKYTYTILINENCNLGHWQEALRLYKDMLDREIQP 643

Query: 536 DDTVFSTIVKKVADD 550
           D    S ++K +  D
Sbjct: 644 DSCTHSALLKHLNKD 658



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 111/384 (28%), Positives = 185/384 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E    T + +++ +C +G+L +AS+L + M  R  +P       ++ GL +  R+  A 
Sbjct: 256 LEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDAR 315

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+L +MV    +PD ++YN ++ G  + G I  A  L  E+   G  P V+TYNT++  +
Sbjct: 316 KLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDGL 375

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+    + ++ G  P + T+TIL+   CK   +  A E+ D+M   G  PD 
Sbjct: 376 CRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPDR 435

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y + +    K G    A  +   +L+RG  P+ ITYN  +  L   G      +++  
Sbjct: 436 FAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVKK 495

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P   TY  +I+     G + +A   F +M+SK   P +VTY  ++ +    G 
Sbjct: 496 MLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVTYTVLIHSYAVRGR 555

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L  A+     ++     P +ITYN LI+GL K   M++A   + +M   GISP+  T+  
Sbjct: 556 LKLAILHFFEMHEKGVHPNVITYNALINGLCKVRKMDQAYKFFTEMQAKGISPNKYTYTI 615

Query: 473 LIWGFCRADQVEEAVDLLKEIGKR 496
           LI   C     +EA+ L K++  R
Sbjct: 616 LINENCNLGHWQEALRLYKDMLDR 639



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 186/368 (50%), Gaps = 1/368 (0%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD-NGKFKQAIGFWKDQLRKGCPPY 256
            K+  +   + +  +M   G  PD+   N +LR + D +     A   +   +  G  P 
Sbjct: 130 AKKSMLEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPT 189

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           ++TY  +++  CKQ  +  A+++L  M   GC P+ VTYN LVN     G+ + A  +I 
Sbjct: 190 VVTYNTMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQ 249

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +L  G+E ++ TY+ L+     +G  D   ++ + M      PT+ TYN ++ GLCK+G
Sbjct: 250 EMLRLGLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWG 309

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            V  A    + MV+KN  PD+V+YNT++    + G + EA  L   L      P ++TYN
Sbjct: 310 RVSDARKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYN 369

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           TLIDGL + G ++ AM L  +M+++G  PD  T   L+ GFC+   +  A +L  E+  R
Sbjct: 370 TLIDGLCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNR 429

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G +    AY   I G  K      A  + E M++  + PD   ++  +  +   G  +EA
Sbjct: 430 GLQPDRFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEA 489

Query: 557 YKLWQKLI 564
            +L +K++
Sbjct: 490 SELVKKML 497



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 196/408 (48%), Gaps = 1/408 (0%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR-GQIRSAIALLDEMSVSGCEPDVITYN 226
           +EK   V   MV  G +PD    N ++  L  R   I  A  + + M   G  P V+TYN
Sbjct: 135 LEKCLLVFYKMVSKGMLPDLKNCNRVLRLLRDRDSSIDVAREVYNVMVECGIRPTVVTYN 194

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
           T+L +    GK ++A+       + GC P  +TY +L+  +     + +A E++ +M   
Sbjct: 195 TMLDSFCKQGKVQEALQLLLQMQKMGCLPNDVTYNVLVNGLSHSGELEQAKELIQEMLRL 254

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G      TY+ L+   C++G+ D+A  +   +LSRG  P  +TYNT+++ L   G     
Sbjct: 255 GLEVSAYTYDPLIRGYCEKGQLDEASRLGEEMLSRGAVPTLVTYNTIMYGLCKWGRVSDA 314

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            K+LD+M   +  P + +YN LI G  + G +  A   F ++  +   P +VTYNT++  
Sbjct: 315 RKLLDVMVNKNLMPDLVSYNTLIYGYTRLGNIGEAFLLFAELRFRGLVPSVVTYNTLIDG 374

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LC+ G L+ A++L   +      P + T+  L+ G  K G +  A  L+ +M+  G+ PD
Sbjct: 375 LCRMGDLDVAMRLKDEMIKHGPDPDVFTFTILVRGFCKLGNLPMAKELFDEMLNRGLQPD 434

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
              + T I G  +     +A  + +E+  RG       Y + I GL K   +  A ++++
Sbjct: 435 RFAYITRIVGELKLGDPSKAFGMQEEMLARGFPPDLITYNVFIDGLHKLGNLKEASELVK 494

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            M+ +   PD   +++I+      G   +A  ++ +++   +F    T
Sbjct: 495 KMLYNGLVPDHVTYTSIIHAHLMAGHLRKARAVFLEMLSKGIFPSVVT 542


>gi|224713524|gb|ACN62069.1| PPR-814c [Zea mays]
          Length = 814

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/414 (28%), Positives = 207/414 (50%), Gaps = 3/414 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-A 208
           P  H    L+    R  R E A      ++ +G   + I  N ++ G C+  +   A+  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALDI 168

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQ 266
           LL      GC PDV +Y+ +L+++ D GK  QA    +     G  C P ++ Y  +I+ 
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDG 228

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
             K+  + +A ++  +M   G  PD+VTYNS+V+  CK    D A   +  ++++ + PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 288

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           + TYN L++   S G W    ++   M   S  P V T ++L+  LCKYG +  A + F+
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M  K   PD+ +YN +L     +G L +   L  L+ G   +P   T+N LI   A  G
Sbjct: 349 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCG 408

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            ++KAM+++ +M ++G+ PD +T+RT+I   CR  ++++A++   ++  +G      AY 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 468

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            +I G C    +  A +++  ++++    D   FS+I+  +   G   +A  ++
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522



 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 115/445 (25%), Positives = 219/445 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  + S G+  +A ++   M R + +PD      L+  L +  +I++A  V   M
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 350

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            M G  PD  +YN+M+ G   +G +     L D M   G  PD  T+N +++   + G  
Sbjct: 351 AMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGML 410

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + +    G  P ++TY  +I  +C+   +  A+E  + M  +G +PD   YN L
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCL 470

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C  G    A  +I+ +++ GM  + + +++++++L   G       I D+      
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    Y++L++G C  G +++A+  F+ MVS   +P++V Y T++   CK G ++E L 
Sbjct: 531 HPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLS 590

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P  I Y+ +IDGL + G    A V + +M E+GI+ D  T+  ++ G  
Sbjct: 591 LFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLF 650

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +    +EA+ L KE+     K+       +I G+ ++++V+ A  +   +  SR  P   
Sbjct: 651 KNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFASISRSRLVPSVV 710

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            +S ++  +  +G+ EEA  ++  +
Sbjct: 711 TYSIMITNLIKEGLVEEAEDMFSSM 735



 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 229/478 (47%), Gaps = 37/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +L++ C +GK   A  L+ +MA    +  P+      +I G  +   + KA  + + MV 
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVIDGFFKEGDVNKACDLFKEMVQ 247

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TYN +V  LCK   +  A A L +M      P+  TYN ++      G++K+
Sbjct: 248 RGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +K+  R    P ++T ++L+  +CK   I  A +V D MA++G +PD+ +YN ++N
Sbjct: 308 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNIMLN 367

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +G   D   + + +L  G+ P+  T+N L+ +  + G  D    I + M +    P
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP------------------------- 395
            V TY  +I  LC+ G +D A+  FNQM+ +   P                         
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELI 487

Query: 396 ----------DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                     DIV +++++  LCK G + +A  +  L       P  + Y+ L+DG    
Sbjct: 488 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLV 547

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G MEKA+ ++  M+  GI P+ + + TL+ G+C+  +++E + L +E+ +RG K     Y
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILY 607

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            ++I GL ++ +   A      M  S    D   ++ +++ +  +   +EA  L+++L
Sbjct: 608 SIIIDGLFQAGRTVPAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKEL 665



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 118/463 (25%), Positives = 222/463 (47%), Gaps = 3/463 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKV 174
           D  T + ++ + C  GK+ +A  + D MA + Q PD F + I ++ G      +   + +
Sbjct: 323 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYNI-MLNGYATKGCLVDMTDL 381

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             +M+  G  PD  T+N+++      G +  A+ + +EM   G +PDV+TY T++  +  
Sbjct: 382 FDLMLGDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCR 441

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK   A+  +   + +G  P    Y  LI+  C    + +A E++ ++   G   DIV 
Sbjct: 442 IGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVF 501

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           ++S++N  CK G+  DA  + +  ++ G+ P+++ Y+ L+      G  +   ++ D M 
Sbjct: 502 FSSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMV 561

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            A   P V  Y  L+NG CK G +D  ++ F +M+ +  +P  + Y+ ++  L + G   
Sbjct: 562 SAGIEPNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTV 621

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A    H +  S  +  + TYN ++ GL K  C ++A+ L+ ++    +  + IT  T+I
Sbjct: 622 PAKVKFHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMI 681

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G  +  +VEEA DL   I +         Y ++I  L K   V+ A  +   M ++  +
Sbjct: 682 DGMFQTRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCE 741

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV-FEKGTTLL 576
           P+  + + +V+++        A     K+ E     E  TT+L
Sbjct: 742 PNSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTML 784



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 99/400 (24%), Positives = 192/400 (48%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T N +++ + + G L  A  + + M      PD      +I  L RI +++
Sbjct: 387 GDGIAPDFYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 446

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A +    M+  G  PD   YN ++ G C  G +  A  L+ E+  +G   D++ +++I+
Sbjct: 447 DAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 506

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G+   A   +   +  G  P  + Y++L++  C    + +A+ V D M   G  
Sbjct: 507 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 566

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++V Y +LVN  CK G+ D+ + +   +L RG++P++I Y+ ++  L   G        
Sbjct: 567 PNVVVYCTLVNGYCKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVK 626

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M E+  +  + TYNI++ GL K    D AI  F ++ + N + +I+T NT++  + +
Sbjct: 627 FHEMTESGIAMDICTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQ 686

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              + EA  L   ++ S   P ++TY+ +I  L K+G +E+A  ++  M   G  P+   
Sbjct: 687 TRRVEEAKDLFASISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRL 746

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
              ++    + +++  A   L +I +R   + +    L++
Sbjct: 747 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 90/338 (26%), Positives = 166/338 (49%), Gaps = 1/338 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D+   N ++Q FC+ G L  A +LI  +       D  F  ++I  L ++ R+  A 
Sbjct: 460 VAPDKYAYNCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 519

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +  + V  G  PD + Y+M++ G C  G++  A+ + D M  +G EP+V+ Y T++   
Sbjct: 520 NIFDLTVNVGLHPDAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVVYCTLVNGY 579

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  + +  +++ L++G  P  I Y+I+I+ + +      A     +M   G + DI
Sbjct: 580 CKIGRIDEGLSLFREMLQRGIKPSTILYSIIIDGLFQAGRTVPAKVKFHEMTESGIAMDI 639

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN ++    K   +D+A+ +   L +  ++ N IT NT++  +      +    +   
Sbjct: 640 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIDGMFQTRRVEEAKDLFAS 699

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           ++ +   P+V TY+I+I  L K GLV+ A + F+ M +  C+P+    N V+  L K+  
Sbjct: 700 ISRSRLVPSVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPNSRLLNHVVRELLKKNE 759

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG-CME 449
           +  A   L  ++  + S   +T   L+D  + KG C E
Sbjct: 760 IVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 110/220 (50%), Gaps = 3/220 (1%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SPT  TY IL++   +    + A+  F Q++    + +I+  N +L   C+    +EAL 
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLEGFCEAKRTDEALD 167

Query: 419 -LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI--SPDDITHRTLIW 475
            LLH      C P + +Y+ L+  L  +G   +A  L   M E G   SP+ + + T+I 
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPNVVAYNTVID 227

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GF +   V +A DL KE+ +RG       Y  V+H LCK++ +D A   L  M++ R  P
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 287

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           ++  ++ ++   +  G  +EA ++++++    +     TL
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 327


>gi|449479180|ref|XP_004155527.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 653

 Score =  199 bits (506), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 210/410 (51%), Gaps = 5/410 (1%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E   N ++++F + G + +   +   M      P  +    L+ GL+    IE A KV +
Sbjct: 185 ESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFE 244

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
           +M     VPDT+TYN+M+ G CK G+++ A+    +M +   +PD ITY T+++  +   
Sbjct: 245 VMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSER 304

Query: 237 KFKQAIGFWKDQLRKGC--PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            F   +  + +   +G   PP+  +Y+++I  +CKQ     A  V + M  +GC  ++  
Sbjct: 305 DFDTCLSLYLEMEERGLEIPPH--SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAI 362

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +L++   K G  ++A+ +   + + G EP+++TY+ L++ L   G  D   ++ D   
Sbjct: 363 YTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCR 422

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               +     Y  LI+GL K G ++ A N F +M  K C  D   YN ++ AL K G ++
Sbjct: 423 NKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKID 482

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +AL L   +    C   + T+  LIDGL K+   E+A+  + +M++ GI+P   + R L 
Sbjct: 483 QALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALA 542

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
            G C   +V  A  +L ++   G  +  +A+  +I+ LCK++++  A ++
Sbjct: 543 IGLCLCGKVARACKILDDLAPMG-IIPETAFEDMINTLCKAQRIKEACKL 591



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 162/340 (47%)

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N+++++  + G  ++ +  W+     G  P L TY  L+  +     I  A +V + M  
Sbjct: 189 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 248

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
               PD VTYN ++   CK GK   A+    ++  + ++P+ ITY TL+ +  S   +D 
Sbjct: 249 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 308

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              +   M E        +Y+++I GLCK      A   F  M  K C+ ++  Y  ++ 
Sbjct: 309 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 368

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           +  K G + EA++L   +      P  +TY+ L++GL K G ++  M L+      G++ 
Sbjct: 369 SYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAI 428

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           + + + +LI G  +A ++E+A +L +E+ ++G    +  Y  +I  L K  K+D A+ + 
Sbjct: 429 NAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALF 488

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             M           F+ ++  +  +   EEA K W K+I+
Sbjct: 489 GRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMID 528



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 187/425 (44%), Gaps = 36/425 (8%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG  +  D  T N +++ +C  GKL  A +    M  +N  PD    + LI+        
Sbjct: 247 DGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDF 306

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           +    +   M   G      +Y++++GGLCK+ +   A A+ + M+  GC  +V  Y  +
Sbjct: 307 DTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTAL 366

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           + +   NG  ++A+  ++    +G  P  +TY++L+  +CK   +   +E+ D    +G 
Sbjct: 367 IDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGV 426

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           + + + Y SL++   K G+ +DA  +   +  +G   +S  YN ++ +L   G  D    
Sbjct: 427 AINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALA 486

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M E     TV+T+ ILI+GL K    + AI  +++M+ K   P + ++  +   LC
Sbjct: 487 LFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLC 546

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G +  A ++L                   D LA                  GI P + 
Sbjct: 547 LCGKVARACKIL-------------------DDLAPM----------------GIIP-ET 570

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
               +I   C+A +++EA  L   I  RG ++      ++I+ L K+   D+ I+++   
Sbjct: 571 AFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSK 630

Query: 529 ISSRY 533
           I   Y
Sbjct: 631 IGIGY 635



 Score =  109 bits (273), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 131/323 (40%), Gaps = 70/323 (21%)

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
           LV   L  RG+       N+L+ S G+ G  + +  +   M E    P+++TYN L+NGL
Sbjct: 171 LVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGL 230

Query: 373 -----------------------------------CKYGLVDRAINSFNQMVSKNCQPDI 397
                                              CK G + +A+  F  M  KN +PD 
Sbjct: 231 VNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDK 290

Query: 398 VTYNT-----------------------------------VLGALCKEGMLNEALQLLHL 422
           +TY T                                   V+G LCK+    EA  +   
Sbjct: 291 ITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFET 350

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +N   C   +  Y  LID  +K G ME+AM L+ +M   G  PD +T+  L+ G C++ +
Sbjct: 351 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGR 410

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +++ ++L      +G  +    Y  +I GL K+ +++ A  + E M       D   ++ 
Sbjct: 411 LDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNA 470

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           I+  +A  G  ++A  L+ ++ E
Sbjct: 471 IIDALAKHGKIDQALALFGRMEE 493


>gi|302808035|ref|XP_002985712.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
 gi|300146621|gb|EFJ13290.1| hypothetical protein SELMODRAFT_181879 [Selaginella moellendorffii]
          Length = 447

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 111/386 (28%), Positives = 206/386 (53%), Gaps = 7/386 (1%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + ++Y +++ G CK G+ + A+ LLDEM  +G  P+V+ + TI+R +   GK  QA+  +
Sbjct: 29  NEVSYGILMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHF 88

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           + ++ + C P + TY+ L++ +CK      A  ++ +M  +GCSP++VTYN+L++   K 
Sbjct: 89  R-RIGEDCAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKL 147

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
            + D+ ++++  +  RG   + ITY  +L         D   ++L+ + + +    V TY
Sbjct: 148 ERLDEVLMLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRN----VVTY 203

Query: 366 NILINGL--CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           N L   L   +      A++   +M+ +  +P+ V Y TVL  LCK   L+EA Q+L  +
Sbjct: 204 NSLFTALSTAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSM 263

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
               C    ++Y  L+   A  G    ++ L G+M+ +G   D  T   +I  FC+A  +
Sbjct: 264 YSQGCKTDDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDL 323

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            EA  L K + +RG+   N  Y  +I   CK+++ D A+++L  MI + +KP+   +++I
Sbjct: 324 HEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSI 383

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKVF 569
           +K    +   EEA  ++Q +++   F
Sbjct: 384 IKSFCREQREEEARGIFQMMVDNGCF 409



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 103/388 (26%), Positives = 193/388 (49%), Gaps = 7/388 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L++G  +    ++A ++L  M  +G  P+ + +  ++ GLC  G++  A+     +    
Sbjct: 36  LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFRRIG-ED 94

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C P+V TY+T++  +  +G+  +A G   + ++KGC P ++TY  LI+   K   +   +
Sbjct: 95  CAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVL 154

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L +M+  GC  D++TY  +++  CK    D+A  ++N L  R    N +TYN+L  +L
Sbjct: 155 MLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKR----NVVTYNSLFTAL 210

Query: 338 GSRGCWDAVD--KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            +       +   +L+ M +    P    Y  ++  LCK   +D A      M S+ C+ 
Sbjct: 211 STAEGDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKT 270

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D V+Y  ++ A    G   ++L+LL  + GS       T N +I    K G + +A  L+
Sbjct: 271 DDVSYKILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLF 330

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M + G  P ++T+ TLI  FC+A Q + AV LL ++ +   K     Y  +I   C+ 
Sbjct: 331 KSMYQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCRE 390

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTI 543
           ++ + A  + ++M+ +   PD   ++T+
Sbjct: 391 QREEEARGIFQMMVDNGCFPDRVSYTTL 418



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 103/385 (26%), Positives = 186/385 (48%), Gaps = 36/385 (9%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++Q FC  G+   A +L+D M      P+      +IRGL    ++ +A    +  +   
Sbjct: 36  LMQGFCKAGEFQQALELLDEMKSNGVRPNVVIHTTIIRGLCTAGKVSQALLHFR-RIGED 94

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  TY+ +V  LCK GQ   A  L+ EM   GC P+V+TYN ++       +  + +
Sbjct: 95  CAPNVYTYSTLVDALCKSGQPHEAYGLVTEMVKKGCSPNVVTYNALIDGFRKLERLDEVL 154

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGI----------------------------- 273
              K+  ++GC   +ITYT++++  CK   I                             
Sbjct: 155 MLLKEMSQRGCRADVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAE 214

Query: 274 ----ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
                 A+ +L+ M  EG  P+ V Y +++   CK  + D+A  V+ ++ S+G + + ++
Sbjct: 215 GDRTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVS 274

Query: 330 YNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           Y  L+ +  + G  +D+++ +L  M  + +     T N++I+  CK G +  A   F  M
Sbjct: 275 YKILVVAFANAGRTYDSLE-LLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSM 333

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             +   P  VTYNT++GA CK    + A++LLH +  +   P +ITYN++I    ++   
Sbjct: 334 YQRGSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQRE 393

Query: 449 EKAMVLYGQMMENGISPDDITHRTL 473
           E+A  ++  M++NG  PD +++ TL
Sbjct: 394 EEARGIFQMMVDNGCFPDRVSYTTL 418



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 68/290 (23%), Positives = 120/290 (41%), Gaps = 41/290 (14%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP--DFHFCINLIRGLIRIDRIEKASK 173
           D  T   IL  FC    + +A +L++ + +RN +        ++   G    DR  +A  
Sbjct: 168 DVITYTMILDIFCKNNSIDEAYRLLNALEKRNVVTYNSLFTALSTAEG----DRTTEALS 223

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ M+  G  P+ + Y  ++  LCK  ++  A  +L  M   GC+ D ++Y  ++    
Sbjct: 224 LLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKILVVAFA 283

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           + G+   ++      L  G      T  ++I + CK   +  A ++   M   G  P  V
Sbjct: 284 NAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNV 343

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L+   CK  + D AV +++ ++    +PN ITYN+++ S                 
Sbjct: 344 TYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKS----------------- 386

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
                              C+    + A   F  MV   C PD V+Y T+
Sbjct: 387 ------------------FCREQREEEARGIFQMMVDNGCFPDRVSYTTL 418



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 52/213 (24%), Positives = 99/213 (46%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           + T+A  L++ M +    P+      ++  L +  R+++A +VL  M   G   D ++Y 
Sbjct: 217 RTTEALSLLEKMIQEGTRPNQVNYRTVLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYK 276

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           ++V      G+   ++ LL  M  SG   D  T N ++      G   +A   +K   ++
Sbjct: 277 ILVVAFANAGRTYDSLELLGRMLGSGYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQR 336

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P  +TY  LI   CK      A+++L  M      P+++TYNS++   C++ + ++A
Sbjct: 337 GSIPSNVTYNTLIGAFCKAQQPDTAVKLLHQMIQADFKPNVITYNSIIKSFCREQREEEA 396

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             +   ++  G  P+ ++Y TL  S      +D
Sbjct: 397 RGIFQMMVDNGCFPDRVSYTTLKLSKNEAAIYD 429



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 48/191 (25%), Positives = 84/191 (43%), Gaps = 2/191 (1%)

Query: 123 ILQNFCSRGKLTDASK-LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +L   C   +L +A + L+ + ++  +  D  + I L+       R   + ++L  M+ S
Sbjct: 243 VLLMLCKNSRLDEAYQVLLSMYSQGCKTDDVSYKI-LVVAFANAGRTYDSLELLGRMLGS 301

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G + DT T N+++   CK G +  A  L   M   G  P  +TYNT++       +   A
Sbjct: 302 GYILDTKTMNVVIHKFCKAGDLHEAHQLFKSMYQRGSIPSNVTYNTLIGAFCKAQQPDTA 361

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +      ++    P +ITY  +I+  C++     A  +   M   GC PD V+Y +L   
Sbjct: 362 VKLLHQMIQADFKPNVITYNSIIKSFCREQREEEARGIFQMMVDNGCFPDRVSYTTLKLS 421

Query: 302 SCKQGKYDDAV 312
             +   YD  V
Sbjct: 422 KNEAAIYDQKV 432


>gi|242065566|ref|XP_002454072.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
 gi|241933903|gb|EES07048.1| hypothetical protein SORBIDRAFT_04g024190 [Sorghum bicolor]
          Length = 820

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 123/456 (26%), Positives = 210/456 (46%), Gaps = 13/456 (2%)

Query: 101 HDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIR 160
           H P  P+           T N +++  C R  L  A + + +M R    PD     +LI 
Sbjct: 122 HGPPAPTG---------ATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLIL 172

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
           G  R  +++ A  +   M + G   D ++Y  ++ G C+ G++  A+ L  E+     +P
Sbjct: 173 GYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QP 228

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D+ T+  +++ + D  + ++ +   +     G  P    Y  L++  C++     A ++L
Sbjct: 229 DMYTHAALVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKML 288

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           ++M   G  P  VT  ++VN  C++G+   AV V  ++  +G EPN  TYN ++    + 
Sbjct: 289 NEMFDNGLVPCAVTCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNV 348

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G       +LD M E    P V TYN+LI G C  G ++ A      M       D  TY
Sbjct: 349 GKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTY 408

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N ++ ALCK G ++EA  L   L      P  +T+NT+I+GL K G  + A     +M+ 
Sbjct: 409 NVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVS 468

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G +PD  T+   I   C+     E +  + E+ ++  K     Y +VI  L K +   +
Sbjct: 469 AGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGL 528

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           A ++   M+S    PD   ++T V+   ++G   EA
Sbjct: 529 ATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEA 564



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 197/426 (46%), Gaps = 4/426 (0%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
            D  +   +++ FC  G++ +A +L     R  + PD +    L++GL    R E+   +
Sbjct: 197 QDAVSYAALIEGFCETGRVDEALELF----RELEQPDMYTHAALVKGLCDARRGEEGLYM 252

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           LQ M   G  P T  Y  +V   C+  +   A  +L+EM  +G  P  +T   ++     
Sbjct: 253 LQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAYCR 312

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+   A+  ++    KGC P + TY  +++  C    + +A+ +LD M   G  PD+VT
Sbjct: 313 EGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVT 372

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L+   C  G  + A  ++  +   G+  +  TYN L+ +L   G  D    + D + 
Sbjct: 373 YNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLE 432

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P   T+N +INGLCK G  D A     +MVS  C PD  TY+  +  LCK     
Sbjct: 433 YRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSR 492

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           E L  +  +      P  + Y  +ID L K+     A  ++GQM+  G SPD +T+ T +
Sbjct: 493 EGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSV 552

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             +C   ++ EA +++ E+ K G  +   AY  +I G     K D A+ +L+ M      
Sbjct: 553 RAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASM 612

Query: 535 PDDTVF 540
           P+   F
Sbjct: 613 PNHFTF 618



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/407 (25%), Positives = 200/407 (49%), Gaps = 4/407 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LIR L R   +  A + L +MV SG  PD  T+N ++ G C+  Q+  A  L D+M + G
Sbjct: 135 LIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRG 194

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              D ++Y  ++    + G+  +A+  +++  +    P + T+  L++ +C        +
Sbjct: 195 FSQDAVSYAALIEGFCETGRVDEALELFRELEQ----PDMYTHAALVKGLCDARRGEEGL 250

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L  M   G  P    Y +LV+  C++ K ++A  ++N +   G+ P ++T   ++++ 
Sbjct: 251 YMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAVTCTAVVNAY 310

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G      ++ + M      P V+TYN ++ G C  G V +A+   +QM     +PD+
Sbjct: 311 CREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDV 370

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTYN ++   C +G +  A +LL L+ G+  +    TYN LID L K G +++A  L+  
Sbjct: 371 VTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKVDEACSLFDG 430

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           +   GI P+ +T  T+I G C+  + + A   L+++   G       Y   I  LCK+K 
Sbjct: 431 LEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKG 490

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               +  ++ M+    KP    ++ ++ ++  +     A ++W +++
Sbjct: 491 SREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMV 537



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 176/382 (46%), Gaps = 4/382 (1%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            P   TYN ++  LC+R  +R A   L  M  SG  PD  T+N+++       +   A  
Sbjct: 126 APTGATYNALIRALCRRADLRHAQRYLSLMVRSGWRPDAFTFNSLILGYCRTQQLDVAQD 185

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +     +G     ++Y  LIE  C+   +  A+E+  ++      PD+ T+ +LV   C
Sbjct: 186 LFDKMPLRGFSQDAVSYAALIEGFCETGRVDEALELFRELE----QPDMYTHAALVKGLC 241

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
              + ++ + ++  +   G  P +  Y  L+         +  +K+L+ M +    P   
Sbjct: 242 DARRGEEGLYMLQKMKELGWRPATRAYAALVDLWCREQKAEEAEKMLNEMFDNGLVPCAV 301

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           T   ++N  C+ G +  A+  F  M  K C+P++ TYN ++   C  G + +A+ LL  +
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM 361

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P ++TYN LI G    G +E A  L   M  NG++ D  T+  LI   C+  +V
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA  L   +  RG +  +  +  VI+GLCK  K D+A   LE M+S+   PD   +S  
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPF 481

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           ++ +     + E      ++++
Sbjct: 482 IENLCKTKGSREGLSFIDEMLQ 503



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 108/449 (24%), Positives = 197/449 (43%), Gaps = 16/449 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++Q FC+ GK+  A  L+D M      PD      LIRG      IE A ++L++M
Sbjct: 337 TYNAMVQGFCNVGKVYKAMALLDQMRECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLM 396

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G   D  TYN+++  LCK G++  A +L D +   G  P+ +T+NT++  +   GKF
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKF 456

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F +  +  GC P   TY+  IE +CK  G    +  +D+M  +   P  V Y  +
Sbjct: 457 DVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIV 516

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+  Y  A  +   ++S G  P+ +TY T + +  + G     + ++  M +   
Sbjct: 517 IDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGI 576

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL-------------- 404
                 YN LI+G    G  D A+     M      P+  T+  +L              
Sbjct: 577 IVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPL 636

Query: 405 --GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
              ++ K   L +  +L  L+  +S       Y  +++G +++  +++   L   M E+ 
Sbjct: 637 KTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDD 696

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +  ++  + +L+  FC+     +A  LL  +   G      +Y+ ++ G     + D A 
Sbjct: 697 LPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAK 756

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDG 551
           ++   +    Y  D+ V+  I+  +   G
Sbjct: 757 EIFRGLRWKEYNTDEIVWKIIIDGLIRQG 785



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 101/467 (21%), Positives = 198/467 (42%), Gaps = 17/467 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G+++ A ++ + M  +   P+      +++G   + ++ KA  +L  M
Sbjct: 302 TCTAVVNAYCREGRMSGAVRVFESMKLKGCEPNVWTYNAMVQGFCNVGKVYKAMALLDQM 361

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD +TYN+++ G C  G I SA  LL  M  +G   D  TYN ++  +   GK 
Sbjct: 362 RECGVEPDVVTYNLLIRGQCIDGHIESAFRLLRLMEGNGLAADQYTYNVLIDALCKTGKV 421

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +     +G  P  +T+  +I  +CK      A   L+ M   GC+PD  TY+  
Sbjct: 422 DEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKFDVACTFLEKMVSAGCAPDTYTYSPF 481

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK     + +  I+ +L + ++P+++ Y  ++  L     +    +I   M     
Sbjct: 482 IENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIVIDRLFKERNYGLATRIWGQMVSLGC 541

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP V TY   +   C  G +  A N   +M       D + YNT++      G  + A+ 
Sbjct: 542 SPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGIIVDAMAYNTLIDGHTSIGKTDHAVT 601

Query: 419 LLHLLNGSSCSPCLITY--------------NTLIDGLAKKGCMEKAMV--LYGQMMENG 462
           +L  + G +  P   T+              +  +   +    +E A V  L+  M +N 
Sbjct: 602 ILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPLKTTSVWKTIELADVFELFELMKKNS 661

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +      +  ++ GF    +++E   L+  + +    +    Y  +++  CK +    A 
Sbjct: 662 VPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDDLPLNEDIYTSLVNCFCKLRMYPDAW 721

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            +L  MI   + P+   +  ++     +G  + A ++++ L  WK +
Sbjct: 722 ALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAKEIFRGL-RWKEY 767



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 95/420 (22%), Positives = 180/420 (42%), Gaps = 16/420 (3%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           +G  +  D+ T N ++   C  GK+ +A  L D +  R   P+      +I GL +  + 
Sbjct: 397 EGNGLAADQYTYNVLIDALCKTGKVDEACSLFDGLEYRGIRPNSVTFNTVINGLCKGGKF 456

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           + A   L+ MV +G  PDT TY+  +  LCK    R  ++ +DEM     +P  + Y  +
Sbjct: 457 DVACTFLEKMVSAGCAPDTYTYSPFIENLCKTKGSREGLSFIDEMLQKDVKPSTVNYTIV 516

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +  +F    +  A   W   +  GC P ++TYT  +   C +  +  A  V+ +M   G 
Sbjct: 517 IDRLFKERNYGLATRIWGQMVSLGCSPDVVTYTTSVRAYCNEGRLHEAENVVMEMKKGGI 576

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH-----------SL 337
             D + YN+L++     GK D AV ++ ++      PN  T+  LL             L
Sbjct: 577 IVDAMAYNTLIDGHTSIGKTDHAVTILKHMTGVASMPNHFTFFILLRHLLQRRLAEDVPL 636

Query: 338 GSRGCWDAVD-----KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
            +   W  ++     ++ ++M + S   +   Y  ++ G  +   +D   +  + M   +
Sbjct: 637 KTTSVWKTIELADVFELFELMKKNSVPSSARAYLAILEGFSEERRLDEVTSLVSHMKEDD 696

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
              +   Y +++   CK  M  +A  LL  + G    P LI+Y  L+ G   +G  ++A 
Sbjct: 697 LPLNEDIYTSLVNCFCKLRMYPDAWALLCSMIGHGFLPNLISYQYLLSGFTAEGQADRAK 756

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            ++  +     + D+I  + +I G  R    +   D++  + +   K  +  Y ++   L
Sbjct: 757 EIFRGLRWKEYNTDEIVWKIIIDGLIRQGHPDMCHDMISILEQMKCKPSDETYAMLTEEL 816



 Score = 85.1 bits (209), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 52/203 (25%), Positives = 101/203 (49%), Gaps = 5/203 (2%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNC-QPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           T+  L+    +Y L    +  F  M       P   TYN ++ ALC+   L  A + L L
Sbjct: 95  TFRSLLTHFSRYALTPLMLRLFAHMYHHGPPAPTGATYNALIRALCRRADLRHAQRYLSL 154

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  S   P   T+N+LI G  +   ++ A  L+ +M   G S D +++  LI GFC   +
Sbjct: 155 MVRSGWRPDAFTFNSLILGYCRTQQLDVAQDLFDKMPLRGFSQDAVSYAALIEGFCETGR 214

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V+EA++L +E+ ++ +   ++A   ++ GLC +++ +  + +L+ M    ++P    ++ 
Sbjct: 215 VDEALELFREL-EQPDMYTHAA---LVKGLCDARRGEEGLYMLQKMKELGWRPATRAYAA 270

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           +V     +   EEA K+  ++ +
Sbjct: 271 LVDLWCREQKAEEAEKMLNEMFD 293


>gi|357455187|ref|XP_003597874.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|124359582|gb|ABD28711.2| Tetratricopeptide-like helical [Medicago truncatula]
 gi|355486922|gb|AES68125.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 822

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 223/457 (48%), Gaps = 35/457 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C  GK+ +  KLID       +P+  F   +I G  +   +++A++V + + + G
Sbjct: 211 VVKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKG 270

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG------------------------- 217
            +P   TY  ++ G CK G+ +    LL+EM+V G                         
Sbjct: 271 FLPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAA 330

Query: 218 ----------CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
                     CEPD+ TYN ++      G+ K+A  F +    +   P   +YT L+   
Sbjct: 331 EMMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAY 390

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CKQ     A ++L  +A  G  PD+V+Y + ++ S   G+ D A++V   ++ +G+ P++
Sbjct: 391 CKQGDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDA 450

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
             YN L+  L  +G + A   +L  M + +  P  + Y  L++G  +   +D+A   F  
Sbjct: 451 QIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEV 510

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           ++SK   P +V YN ++  LCK G + +A+  ++ +  ++ +P   T++T+IDG  K+  
Sbjct: 511 VMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHD 570

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           ++ A+ ++GQMM+    P+ + + +LI GFC+   +  A  + + +     +     Y +
Sbjct: 571 LDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTI 630

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +I G  K+ K + A    ELM+ +   P+DT F  ++
Sbjct: 631 LIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLI 667



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/454 (25%), Positives = 216/454 (47%), Gaps = 9/454 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARR------NQIPDFHFCINLIRGLIRIDRIEKAS 172
            NN +L      GK+  A +L D M  R      + + D +  + +++GL  + ++E+  
Sbjct: 166 ANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCDVGKVEEGR 225

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K++     +G VP+ + YN+++ G CK+G ++ A  + +E+ + G  P + TY  ++   
Sbjct: 226 KLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLETYGALIDGF 285

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GKF+       +    G    +  +  +I+   K   + +A E++  M   GC PDI
Sbjct: 286 CKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMTEMGCEPDI 345

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN L+NFSC  G+  +A   +     R + PN  +Y  L+H+   +G +     +L  
Sbjct: 346 TTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFK 405

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + E    P + +Y   I+G    G +D A+    +M+ K   PD   YN ++  LCK+G 
Sbjct: 406 IAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGR 465

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
              A  LL  +   +  P    Y TL+DG  +   ++KA  L+  +M  GI P  + +  
Sbjct: 466 FPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNV 525

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G C+  ++ +AV  + ++    +      +  VI G  K   +D A+++   M+  +
Sbjct: 526 MIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQK 585

Query: 533 YKPDDTVFSTIVK---KVADDGMTEEAYKLWQKL 563
           YKP+   +++++    K+AD    E+ ++  Q  
Sbjct: 586 YKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSF 619



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/412 (25%), Positives = 191/412 (46%), Gaps = 13/412 (3%)

Query: 119 TNNKILQNF-CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T   IL NF CS G++ +A + ++    R  +P+      L+    +      AS +L  
Sbjct: 346 TTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYVMASDMLFK 405

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +  +G  PD ++Y   + G    G+I  A+ + ++M   G  PD   YN ++  +   G+
Sbjct: 406 IAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKKGR 465

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F  A     + L     P    Y  L++   +   + +A E+ + +  +G  P +V YN 
Sbjct: 466 FPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFEVVMSKGIDPGVVGYNV 525

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++   CK GK  DAV  +N +      P+  T++T++     +   D+  K+   M +  
Sbjct: 526 MIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQHDLDSALKMFGQMMKQK 585

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
           + P V  Y  LING CK   + RA   F  M S N +P++VTY  ++G   K G   +A 
Sbjct: 586 YKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTYTILIGGFSKTGKPEKAA 645

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLA----------KKGCMEKAMVL--YGQMMENGISP 465
               L+  ++C P   T++ LI+GL           K    +++++L  +  M+  G S 
Sbjct: 646 SFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDRSLILDFFATMISEGWSQ 705

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
              T+ ++I   C+   V+ A  L  ++ ++G  M +  +  ++HGLC++ K
Sbjct: 706 VIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSALLHGLCQTGK 757



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/412 (23%), Positives = 188/412 (45%), Gaps = 7/412 (1%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SV 215
           +L++ +++     +   VL+ M      P     N ++    + G +  A+ +   +  +
Sbjct: 98  SLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYMVCEL 157

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL------ITYTILIEQVCK 269
             C P V+  N++L  +  NGK   A   +   L +G    L       +  I+++ +C 
Sbjct: 158 YNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVKGLCD 217

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +    +++DD    GC P++V YN +++  CK+G    A  V   L  +G  P   T
Sbjct: 218 VGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLPTLET 277

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y  L+      G +  VD++L+ MN    +  V  +N +I+   KYGLVD+A      M 
Sbjct: 278 YGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMMRMMT 337

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
              C+PDI TYN ++   C  G + EA + L      +  P   +Y  L+    K+G   
Sbjct: 338 EMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQGDYV 397

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A  +  ++ E G  PD +++   I G     +++ A+ + +++ ++G       Y +++
Sbjct: 398 MASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVFPDAQIYNVLM 457

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            GLCK  +   A  +L  M+    +PD  +++T+V     +   ++A +L++
Sbjct: 458 SGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELFE 509



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/312 (26%), Positives = 150/312 (48%), Gaps = 12/312 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +  N ++   C +G+   A  L+  M   N  PD +    L+ G IR + ++KA+++ 
Sbjct: 449 DAQIYNVLMSGLCKKGRFPAAKLLLSEMLDLNLQPDAYMYATLVDGFIRNNELDKATELF 508

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++++  G  P  + YN+M+ GLCK G++  A++ +++M ++   PD  T++T++      
Sbjct: 509 EVVMSKGIDPGVVGYNVMIKGLCKCGKMTDAVSYVNKMKIANHAPDEYTHSTVIDGYVKQ 568

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A+  +   +++   P ++ YT LI   CK   ++RA +V   M      P++VTY
Sbjct: 569 HDLDSALKMFGQMMKQKYKPNVVAYTSLINGFCKIADMSRAEKVFRAMQSFNLEPNVVTY 628

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS---------RGCWDAV 346
             L+    K GK + A      +L     PN  T++ L++ L +         +   +  
Sbjct: 629 TILIGGFSKTGKPEKAASFFELMLMNNCLPNDTTFHYLINGLTNITNTTLLIEKNEENDR 688

Query: 347 DKILDI---MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             ILD    M     S  + TYN +I  LCK+G+VD A     +M+ K    D V ++ +
Sbjct: 689 SLILDFFATMISEGWSQVIATYNSIIVCLCKHGMVDTAQLLQTKMLRKGFLMDSVCFSAL 748

Query: 404 LGALCKEGMLNE 415
           L  LC+ G   E
Sbjct: 749 LHGLCQTGKSKE 760



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 87/354 (24%), Positives = 157/354 (44%), Gaps = 7/354 (1%)

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           + Y+++L+ M     F +     +D   +   P L     +I    +   + +A+++   
Sbjct: 94  VAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMFYM 153

Query: 283 M-AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG------MEPNSITYNTLLH 335
           +  +  C P +V  NSL+N   K GK D A  + + +L RG      +  ++ +   ++ 
Sbjct: 154 VCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIVVK 213

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L   G  +   K++D        P V  YN++I+G CK G + RA   F ++  K   P
Sbjct: 214 GLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGFLP 273

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
            + TY  ++   CK G      QLL+ +N    +  +  +N++ID   K G ++KA  + 
Sbjct: 274 TLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAEMM 333

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M E G  PD  T+  LI   C   +++EA + L+   +R       +Y  ++H  CK 
Sbjct: 334 RMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKERTLLPNKFSYTPLMHAYCKQ 393

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
               MA  +L  +  +  KPD   +   +      G  + A  + +K++E  VF
Sbjct: 394 GDYVMASDMLFKIAETGDKPDLVSYGAFIHGSVAGGEIDVALMVREKMMEKGVF 447



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 67/282 (23%), Positives = 123/282 (43%), Gaps = 42/282 (14%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N++ Y++LL  +     +  ++ +L+ M   +  PT+   N +I    +YG VD+A+  F
Sbjct: 92  NNVAYSSLLKLMVKYRLFSEIEIVLEDMKNRNFKPTLEALNSVICVYAEYGFVDKAVKMF 151

Query: 386 NQMVS-KNCQPDIVTYNTVLGALCKEGMLNEALQLL---------HLLN----------- 424
             +    NC P +V  N++L  L K G ++ A +L          H L+           
Sbjct: 152 YMVCELYNCFPCVVANNSLLNCLVKNGKVDVACELYDKMLERGGDHGLDLVVDNYSIVIV 211

Query: 425 ---------------------GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
                                G+ C P ++ YN +IDG  KKG +++A  ++ ++   G 
Sbjct: 212 VKGLCDVGKVEEGRKLIDDRWGNGCVPNVVFYNVIIDGYCKKGDLKRATRVFEELKLKGF 271

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P   T+  LI GFC+A + +    LL E+   G  +    +  +I    K   VD A +
Sbjct: 272 LPTLETYGALIDGFCKAGKFQVVDQLLNEMNVMGLNVNVKVFNSIIDAKYKYGLVDKAAE 331

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++ +M     +PD T ++ ++      G  +EA +  ++  E
Sbjct: 332 MMRMMTEMGCEPDITTYNILINFSCSGGRIKEAEEFLERAKE 373


>gi|334182346|ref|NP_172156.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332189906|gb|AEE28027.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 997

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 227/488 (46%), Gaps = 51/488 (10%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            CS GK   A  +I  M  +  IPD      ++  L    ++E A  + + M   G V D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY +MV   CK G I  A    +EM   GC P+V+TY  ++       K   A   ++
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI-------------- 292
             L +GC P ++TY+ LI+  CK   + +A ++ + M      PD+              
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637

Query: 293 --VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
             VTY +L++  CK  + ++A  +++ +   G EPN I Y+ L+  L   G  D   ++ 
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M+E     T++TY+ LI+   K    D A    ++M+  +C P++V Y  ++  LCK 
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G  +EA +L+ ++    C P ++TY  +IDG    G +E  + L  +M   G++P+ +T+
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817

Query: 471 RTLIWGFCRADQVE---------------------------------EAVDLLKEIGKRG 497
           R LI   C+   ++                                 E++ LL EIG+  
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDD 877

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLE--LMISSRYKPDDTVFSTIVKKVADDGMTEE 555
                S YRL+I  L K+++++MA+++LE     S+      + ++++++ +      E 
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 937

Query: 556 AYKLWQKL 563
           A++L+ ++
Sbjct: 938 AFQLFSEM 945



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 221/497 (44%), Gaps = 60/497 (12%)

Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
           + C  GK  +A  L++     N +PD  F   LI GL      E+A   L  M  +  +P
Sbjct: 279 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + +TY+ ++ G   + Q+     +L+ M + GC P    +N+++     +G    A    
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 246 KDQLRKGCPPYLITYTILIEQVCK-----QCGIARAIE-VLDDMAIEGCSPDIVTYNSLV 299
           K  ++ G  P  + Y ILI  +C       C +    E    +M   G   + +  +S  
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C  GKY+ A  VI  ++ +G  P++ TY+ +L+ L +    +    + + M      
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             V+TY I+++  CK GL+++A   FN+M    C P++VTY  ++ A  K   ++ A +L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM----------------ENGI 463
              +    C P ++TY+ LIDG  K G +EKA  ++ +M                 +N  
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC---------- 513
            P+ +T+  L+ GFC++ +VEEA  LL  +   G +     Y  +I GLC          
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 514 -------------------------KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
                                    K K+ D+A +VL  M+ +   P+  +++ ++  + 
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 549 DDGMTEEAYKLWQKLIE 565
             G T+EAYKL Q + E
Sbjct: 756 KVGKTDEAYKLMQMMEE 772



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 202/428 (47%), Gaps = 20/428 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +    K++ A++L + M     +P+      LI G  +  ++EKA ++ + M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614

Query: 179 VMSGGVPDT----------------ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
             S  VPD                 +TY  ++ G CK  ++  A  LLD MS+ GCEP+ 
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           I Y+ ++  +   GK  +A     +    G P  L TY+ LI++  K      A +VL  
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M    C+P++V Y  +++  CK GK D+A  ++  +  +G +PN +TY  ++   G  G 
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            +   ++L+ M     +P   TY +LI+  CK G +D A N   +M   +       Y  
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           V+    KE +  E+L LL  +     +P L  Y  LID L K   +E A+ L  ++    
Sbjct: 855 VIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912

Query: 463 ISPDDI--THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            +  D   T+ +LI   C A++VE A  L  E+ K+G      ++  +I GL ++ K+  
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972

Query: 521 AIQVLELM 528
           A+ +L+ +
Sbjct: 973 ALLLLDFI 980



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 206/462 (44%), Gaps = 61/462 (13%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGG---------------------------------- 196
           A K+L+ MV  G +P  + YN+++G                                   
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 197 -------LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
                  LC  G+   A +++ EM   G  PD  TY+ +L  + +  K + A   +++  
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R G    + TYTI+++  CK   I +A +  ++M   GC+P++VTY +L++   K  K  
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHS-----------------LGSRGCWDAVDKILDI 352
            A  +   +LS G  PN +TY+ L+                    GS+   D VD     
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD-VDMYFKQ 629

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
            ++ S  P V TY  L++G CK   V+ A    + M  + C+P+ + Y+ ++  LCK G 
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EA ++   ++       L TY++LID   K    + A  +  +M+EN  +P+ + +  
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G C+  + +EA  L++ + ++G +     Y  +I G     K++  +++LE M S  
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL--IEWKVFEKG 572
             P+   +  ++     +G  + A+ L +++    W     G
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 190/428 (44%), Gaps = 21/428 (4%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN------LIRGLIRIDRIEKASKV 174
           N +++  C  G  + A      +    ++ DF F  +      LI+  ++ DR++ AS +
Sbjct: 204 NVLVRKHCRNGSFSIA------LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI 257

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            + M ++    D  T       LCK G+ R A+ L++  +     PD + Y  ++  + +
Sbjct: 258 HREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV---PDTVFYTKLISGLCE 314

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
              F++A+ F        C P ++TY+ L+     +  + R   VL+ M +EGC P    
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL----GSRGC--WDAVDK 348
           +NSLV+  C  G +  A  ++  ++  G  P  + YN L+ S+     S  C   D  +K
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
               M  A         +     LC  G  ++A +   +M+ +   PD  TY+ VL  LC
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
               +  A  L   +        + TY  ++D   K G +E+A   + +M E G +P+ +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  LI  + +A +V  A +L + +   G       Y  +I G CK+ +V+ A Q+ E M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614

Query: 529 ISSRYKPD 536
             S+  PD
Sbjct: 615 CGSKDVPD 622



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 97/417 (23%), Positives = 172/417 (41%), Gaps = 79/417 (18%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN----------------LIRGL 162
           T + ++   C  G++  A ++ + M     +PD                      L+ G 
Sbjct: 590 TYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGF 649

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG----- 217
            +  R+E+A K+L  M M G  P+ I Y+ ++ GLCK G++  A  +  EMS  G     
Sbjct: 650 CKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATL 709

Query: 218 ------------------------------CEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
                                         C P+V+ Y  ++  +   GK  +A    + 
Sbjct: 710 YTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQM 769

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
              KGC P ++TYT +I+       I   +E+L+ M  +G +P+ VTY  L++  CK G 
Sbjct: 770 MEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGA 829

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK-------ILDIMNEASHSP 360
            D    V +NLL    + +  T     H+ G R   +  +K       +LD + +   +P
Sbjct: 830 LD----VAHNLLEEMKQTHWPT-----HTAGYRKVIEGFNKEFIESLGLLDEIGQDDTAP 880

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMV--SKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            +  Y +LI+ L K   ++ A+    ++   S        TYN+++ +LC    +  A Q
Sbjct: 881 FLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVETAFQ 940

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           L   +      P + ++ +LI GL +   + +A++L           D I+H  + W
Sbjct: 941 LFSEMTKKGVIPEMQSFCSLIKGLFRNSKISEALLLL----------DFISHMEIQW 987



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 137/311 (44%), Gaps = 15/311 (4%)

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           +L+ + C+    + A+E L  +      P   TYN L+    K  + D A L+   +   
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            +  +  T     +SL   G W    + L ++   +  P    Y  LI+GLC+  L + A
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKW---REALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           ++  N+M + +C P++VTY+T+L     +  L    ++L+++    C P    +N+L+  
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC---------RADQVEEAVDLLKE 492
               G    A  L  +M++ G  P  + +  LI   C           D  E+A   +  
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
            G   NK+  S++      LC + K + A  V+  MI   + PD + +S ++  + +   
Sbjct: 442 AGVVLNKINVSSF---TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498

Query: 553 TEEAYKLWQKL 563
            E A+ L++++
Sbjct: 499 MELAFLLFEEM 509



 Score = 66.6 bits (161), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 11/260 (4%)

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI----L 350
           YN+LV+   +    DD   V    L +  + +   +   L+ L  + C +    I    L
Sbjct: 168 YNALVDLIVR----DDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEEL 223

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             + +    P+  TYN LI    K   +D A     +M   N + D  T      +LCK 
Sbjct: 224 GRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKV 283

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G   EAL L+   N     P  + Y  LI GL +    E+AM    +M      P+ +T+
Sbjct: 284 GKWREALTLVETEN---FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTY 340

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            TL+ G     Q+     +L  +   G       +  ++H  C S     A ++L+ M+ 
Sbjct: 341 STLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400

Query: 531 SRYKPDDTVFSTIVKKVADD 550
             + P   V++ ++  +  D
Sbjct: 401 CGHMPGYVVYNILIGSICGD 420


>gi|224713522|gb|ACN62068.1| PPR-814b [Zea mays]
          Length = 814

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/478 (26%), Positives = 230/478 (48%), Gaps = 37/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +L++ C +GK   A  L+ +MA    +  PD      +I G  +   + KA  + + MV 
Sbjct: 188 LLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDGFFKEGDVNKACDLFKEMVQ 247

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TY+ +V  LCK   +  A A L +M   G  P+  TYN ++      G++K+
Sbjct: 248 RGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPNNWTYNNLIYGYSSTGQWKE 307

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +K+  R    P ++T ++L+  +CK   I  A +V D MA++G +P++ +Y  ++N
Sbjct: 308 AVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLN 367

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +G   D   + + +L  G+ P+  T+N L+ +  + G  D    I + M +    P
Sbjct: 368 GYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKP 427

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP------------------------- 395
            V TY  +I  LC+ G +D A+  FNQM+ +   P                         
Sbjct: 428 DVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELI 487

Query: 396 ----------DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                     DIV +++++  LCK G + +A  +  L       P  + Y+ L+DG    
Sbjct: 488 SEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLV 547

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G MEKA+ ++  M+  GI P+D+ + TL+ G+C+  +++E + L +E+ ++G K     Y
Sbjct: 548 GKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILY 607

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            ++I GL ++ +   A      M  S    +   ++ +++ +  +   +EA  L+++L
Sbjct: 608 NIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKEL 665



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/414 (27%), Positives = 208/414 (50%), Gaps = 3/414 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-A 208
           P  H    L+    R  R E A      ++ +G   + I  N ++ G C+  +   A+  
Sbjct: 109 PTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALDI 168

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQ 266
           LL      GC PDV +Y+ +L+++ D GK  QA    +     G  C P ++ Y+ +I+ 
Sbjct: 169 LLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVIDG 228

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
             K+  + +A ++  +M   G  PD VTY+S+V+  CK    D A   +  ++++G+ PN
Sbjct: 229 FFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPN 288

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           + TYN L++   S G W    ++   M   S  P V T ++L+  LCKYG +  A + F+
Sbjct: 289 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 348

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M  K   P++ +Y  +L     +G L +   L  L+ G   +P + T+N LI   A  G
Sbjct: 349 TMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCG 408

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            ++KAM+++ +M ++G+ PD +T+RT+I   CR  ++++A++   ++  +G      AY 
Sbjct: 409 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYH 468

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            +I G C    +  A +++  ++++    D   FS+I+  +   G   +A  ++
Sbjct: 469 CLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIF 522



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 218/445 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  + S G+  +A ++   M R + +PD      L+  L +  +I++A  V   M
Sbjct: 291 TYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTM 350

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            M G  P+  +Y +M+ G   +G +     L D M   G  PD+ T+N +++   + G  
Sbjct: 351 AMKGQNPNVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGML 410

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + +    G  P ++TY  +I  +C+   +  A+E  + M  +G +PD   Y+ L
Sbjct: 411 DKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYHCL 470

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C  G    A  +I+ +++ GM  + + +++++++L   G       I D+      
Sbjct: 471 IQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQNIFDLTVNVGL 530

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            PT   Y++L++G C  G +++A+  F+ MVS   +P+ V Y T++   CK G ++E L 
Sbjct: 531 HPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGYCKIGRIDEGLS 590

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P  I YN +IDGL + G    A V + +M E+GI+ +  T+  ++ G  
Sbjct: 591 LFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYNIVLRGLF 650

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +    +EA+ L KE+     K+       +I G+ ++++V+ A  +   +  S   P   
Sbjct: 651 KNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCVV 710

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            +S ++  +  +G+ EEA  ++  +
Sbjct: 711 TYSIMITNLIKEGLVEEAEDMFSSM 735



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 217/462 (46%), Gaps = 1/462 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++ + C  GK+ +A  + D MA + Q P+      ++ G      +   + + 
Sbjct: 323 DVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPNVFSYTIMLNGYATKGCLVDMTDLF 382

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M+  G  PD  T+N+++      G +  A+ + +EM   G +PDV+TY T++  +   
Sbjct: 383 DLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRI 442

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+  +   + +G  P    Y  LI+  C    + +A E++ ++   G   DIV +
Sbjct: 443 GKMDDAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFF 502

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +S++N  CK G+  DA  + +  ++ G+ P ++ Y+ L+      G  +   ++ D M  
Sbjct: 503 SSIINNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVS 562

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A   P    Y  L+NG CK G +D  ++ F +M+ K  +P  + YN ++  L + G    
Sbjct: 563 AGIEPNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVP 622

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A    H +  S  +    TYN ++ GL K  C ++A+ L+ ++    +  + IT  T+I 
Sbjct: 623 AKVKFHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIA 682

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G  +  +VEEA DL   I + G       Y ++I  L K   V+ A  +   M ++  +P
Sbjct: 683 GMFQTRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEP 742

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV-FEKGTTLL 576
           D  + + +V+++        A     K+ E     E  TT+L
Sbjct: 743 DSRLLNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTML 784



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 100/400 (25%), Positives = 191/400 (47%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T N +++ + + G L  A  + + M      PD      +I  L RI +++
Sbjct: 387 GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMD 446

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A +    M+  G  PD   Y+ ++ G C  G +  A  L+ E+  +G   D++ +++I+
Sbjct: 447 DAMEKFNQMIDQGVAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSII 506

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G+   A   +   +  G  P  + Y++L++  C    + +A+ V D M   G  
Sbjct: 507 NNLCKLGRVMDAQNIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIE 566

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P+ V Y +LVN  CK G+ D+ + +   +L +G++P++I YN ++  L   G        
Sbjct: 567 PNDVVYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 626

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M E+  +    TYNI++ GL K    D AI  F ++ + N + +I+T NT++  + +
Sbjct: 627 FHEMTESGIAMNKCTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQ 686

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              + EA  L   ++ S   PC++TY+ +I  L K+G +E+A  ++  M   G  PD   
Sbjct: 687 TRRVEEAKDLFASISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRL 746

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
              ++    + +++  A   L +I +R   + +    L++
Sbjct: 747 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTTMLLV 786



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 87/338 (25%), Positives = 161/338 (47%), Gaps = 1/338 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D+   + ++Q FC+ G L  A +LI  +       D  F  ++I  L ++ R+  A 
Sbjct: 460 VAPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMHLDIVFFSSIINNLCKLGRVMDAQ 519

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +  + V  G  P  + Y+M++ G C  G++  A+ + D M  +G EP+ + Y T++   
Sbjct: 520 NIFDLTVNVGLHPTAVVYSMLMDGYCLVGKMEKALRVFDAMVSAGIEPNDVVYGTLVNGY 579

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  + +  +++ L+KG  P  I Y I+I+ + +      A     +M   G + + 
Sbjct: 580 CKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNK 639

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYN ++    K   +D+A+ +   L +  ++ N IT NT++  +      +    +   
Sbjct: 640 CTYNIVLRGLFKNRCFDEAIFLFKELRAMNVKINIITLNTMIAGMFQTRRVEEAKDLFAS 699

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           ++ +   P V TY+I+I  L K GLV+ A + F+ M +  C+PD    N V+  L K+  
Sbjct: 700 ISRSGLVPCVVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELLKKNE 759

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG-CME 449
           +  A   L  ++  + S   +T   L+D  + KG C E
Sbjct: 760 IVRAGAYLSKIDERNFSLEHLTTMLLVDLFSSKGTCRE 797



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 109/220 (49%), Gaps = 3/220 (1%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SPT  TY IL++   +    + A+  F Q++    + +I+  N +L   C+    +EAL 
Sbjct: 108 SPTSHTYAILMDCCTRAHRPELALAFFGQLLRTGLRVNIIIANHLLKGFCEAKRTDEALD 167

Query: 419 -LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI--SPDDITHRTLIW 475
            LLH      C P + +Y+ L+  L  +G   +A  L   M E G   SPD + + T+I 
Sbjct: 168 ILLHRTPELGCVPDVFSYSILLKSLCDQGKSGQADDLLRMMAEGGAVCSPDVVAYSTVID 227

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GF +   V +A DL KE+ +RG       Y  V+H LCK++ +D A   L  M++    P
Sbjct: 228 GFFKEGDVNKACDLFKEMVQRGIPPDFVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 287

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           ++  ++ ++   +  G  +EA ++++++    +     TL
Sbjct: 288 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 327


>gi|75191658|sp|Q9M9X9.1|PPR18_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g06710, mitochondrial; Flags: Precursor
 gi|7523709|gb|AAF63148.1|AC011001_18 Hypothetical protein [Arabidopsis thaliana]
          Length = 987

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 129/493 (26%), Positives = 229/493 (46%), Gaps = 51/493 (10%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            CS GK   A  +I  M  +  IPD      ++  L    ++E A  + + M   G V D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY +MV   CK G I  A    +EM   GC P+V+TY  ++       K   A   ++
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI-------------- 292
             L +GC P ++TY+ LI+  CK   + +A ++ + M      PD+              
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 637

Query: 293 --VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
             VTY +L++  CK  + ++A  +++ +   G EPN I Y+ L+  L   G  D   ++ 
Sbjct: 638 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 697

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M+E     T++TY+ LI+   K    D A    ++M+  +C P++V Y  ++  LCK 
Sbjct: 698 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 757

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G  +EA +L+ ++    C P ++TY  +IDG    G +E  + L  +M   G++P+ +T+
Sbjct: 758 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 817

Query: 471 RTLIWGFCRADQVE---------------------------------EAVDLLKEIGKRG 497
           R LI   C+   ++                                 E++ LL EIG+  
Sbjct: 818 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDD 877

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLE--LMISSRYKPDDTVFSTIVKKVADDGMTEE 555
                S YRL+I  L K+++++MA+++LE     S+      + ++++++ +      E 
Sbjct: 878 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 937

Query: 556 AYKLWQKLIEWKV 568
           A++L+ ++ +  V
Sbjct: 938 AFQLFSEMTKKGV 950



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 128/497 (25%), Positives = 221/497 (44%), Gaps = 60/497 (12%)

Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
           + C  GK  +A  L++     N +PD  F   LI GL      E+A   L  M  +  +P
Sbjct: 279 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + +TY+ ++ G   + Q+     +L+ M + GC P    +N+++     +G    A    
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 246 KDQLRKGCPPYLITYTILIEQVCK-----QCGIARAIE-VLDDMAIEGCSPDIVTYNSLV 299
           K  ++ G  P  + Y ILI  +C       C +    E    +M   G   + +  +S  
Sbjct: 396 KKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKINVSSFT 455

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C  GKY+ A  VI  ++ +G  P++ TY+ +L+ L +    +    + + M      
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 515

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             V+TY I+++  CK GL+++A   FN+M    C P++VTY  ++ A  K   ++ A +L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM----------------ENGI 463
              +    C P ++TY+ LIDG  K G +EKA  ++ +M                 +N  
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 635

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC---------- 513
            P+ +T+  L+ GFC++ +VEEA  LL  +   G +     Y  +I GLC          
Sbjct: 636 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 695

Query: 514 -------------------------KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
                                    K K+ D+A +VL  M+ +   P+  +++ ++  + 
Sbjct: 696 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 755

Query: 549 DDGMTEEAYKLWQKLIE 565
             G T+EAYKL Q + E
Sbjct: 756 KVGKTDEAYKLMQMMEE 772



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 202/428 (47%), Gaps = 20/428 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +    K++ A++L + M     +P+      LI G  +  ++EKA ++ + M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614

Query: 179 VMSGGVPDT----------------ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
             S  VPD                 +TY  ++ G CK  ++  A  LLD MS+ GCEP+ 
Sbjct: 615 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 674

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           I Y+ ++  +   GK  +A     +    G P  L TY+ LI++  K      A +VL  
Sbjct: 675 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 734

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M    C+P++V Y  +++  CK GK D+A  ++  +  +G +PN +TY  ++   G  G 
Sbjct: 735 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 794

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            +   ++L+ M     +P   TY +LI+  CK G +D A N   +M   +       Y  
Sbjct: 795 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 854

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           V+    KE +  E+L LL  +     +P L  Y  LID L K   +E A+ L  ++    
Sbjct: 855 VIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 912

Query: 463 ISPDDI--THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            +  D   T+ +LI   C A++VE A  L  E+ K+G      ++  +I GL ++ K+  
Sbjct: 913 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 972

Query: 521 AIQVLELM 528
           A+ +L+ +
Sbjct: 973 ALLLLDFI 980



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 206/462 (44%), Gaps = 61/462 (13%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGG---------------------------------- 196
           A K+L+ MV  G +P  + YN+++G                                   
Sbjct: 391 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLAAGVVLNKIN 450

Query: 197 -------LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
                  LC  G+   A +++ EM   G  PD  TY+ +L  + +  K + A   +++  
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 510

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R G    + TYTI+++  CK   I +A +  ++M   GC+P++VTY +L++   K  K  
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHS-----------------LGSRGCWDAVDKILDI 352
            A  +   +LS G  PN +TY+ L+                    GS+   D VD     
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD-VDMYFKQ 629

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
            ++ S  P V TY  L++G CK   V+ A    + M  + C+P+ + Y+ ++  LCK G 
Sbjct: 630 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 689

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EA ++   ++       L TY++LID   K    + A  +  +M+EN  +P+ + +  
Sbjct: 690 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 749

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G C+  + +EA  L++ + ++G +     Y  +I G     K++  +++LE M S  
Sbjct: 750 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 809

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL--IEWKVFEKG 572
             P+   +  ++     +G  + A+ L +++    W     G
Sbjct: 810 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 851



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/428 (25%), Positives = 190/428 (44%), Gaps = 21/428 (4%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN------LIRGLIRIDRIEKASKV 174
           N +++  C  G  + A      +    ++ DF F  +      LI+  ++ DR++ AS +
Sbjct: 204 NVLVRKHCRNGSFSIA------LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI 257

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            + M ++    D  T       LCK G+ R A+ L++  +     PD + Y  ++  + +
Sbjct: 258 HREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV---PDTVFYTKLISGLCE 314

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
              F++A+ F        C P ++TY+ L+     +  + R   VL+ M +EGC P    
Sbjct: 315 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 374

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL----GSRGC--WDAVDK 348
           +NSLV+  C  G +  A  ++  ++  G  P  + YN L+ S+     S  C   D  +K
Sbjct: 375 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEK 434

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
               M  A         +     LC  G  ++A +   +M+ +   PD  TY+ VL  LC
Sbjct: 435 AYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLC 494

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
               +  A  L   +        + TY  ++D   K G +E+A   + +M E G +P+ +
Sbjct: 495 NASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVV 554

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  LI  + +A +V  A +L + +   G       Y  +I G CK+ +V+ A Q+ E M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 614

Query: 529 ISSRYKPD 536
             S+  PD
Sbjct: 615 CGSKDVPD 622



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 148/319 (46%), Gaps = 8/319 (2%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E ++   + ++   C  GKL +A ++   M+        +   +LI    ++ R + ASK
Sbjct: 671 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 730

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL  M+ +   P+ + Y  M+ GLCK G+   A  L+  M   GC+P+V+TY  ++    
Sbjct: 731 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 790

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK +  +   +    KG  P  +TY +LI+  CK   +  A  +L++M          
Sbjct: 791 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 850

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y  ++    K+  + +++ +++ +      P    Y  L+ +L      +   ++L+ +
Sbjct: 851 GYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 908

Query: 354 NEASHSPTVF----TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
             A+ S T+     TYN LI  LC    V+ A   F++M  K   P++ ++ +++  L +
Sbjct: 909 --ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 966

Query: 410 EGMLNEALQLLHLLNGSSC 428
              ++EAL LL  ++   C
Sbjct: 967 NSKISEALLLLDFISHMVC 985



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 137/311 (44%), Gaps = 15/311 (4%)

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           +L+ + C+    + A+E L  +      P   TYN L+    K  + D A L+   +   
Sbjct: 205 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 264

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            +  +  T     +SL   G W    + L ++   +  P    Y  LI+GLC+  L + A
Sbjct: 265 NLRMDGFTLRCFAYSLCKVGKW---REALTLVETENFVPDTVFYTKLISGLCEASLFEEA 321

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           ++  N+M + +C P++VTY+T+L     +  L    ++L+++    C P    +N+L+  
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC---------RADQVEEAVDLLKE 492
               G    A  L  +M++ G  P  + +  LI   C           D  E+A   +  
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNCDLLDLAEKAYSEMLA 441

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
            G   NK+  S++      LC + K + A  V+  MI   + PD + +S ++  + +   
Sbjct: 442 AGVVLNKINVSSF---TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 498

Query: 553 TEEAYKLWQKL 563
            E A+ L++++
Sbjct: 499 MELAFLLFEEM 509



 Score = 66.6 bits (161), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 11/260 (4%)

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI----L 350
           YN+LV+   +    DD   V    L +  + +   +   L+ L  + C +    I    L
Sbjct: 168 YNALVDLIVR----DDDEKVPEEFLQQIRDDDKEVFGEFLNVLVRKHCRNGSFSIALEEL 223

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             + +    P+  TYN LI    K   +D A     +M   N + D  T      +LCK 
Sbjct: 224 GRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKV 283

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G   EAL L+   N     P  + Y  LI GL +    E+AM    +M      P+ +T+
Sbjct: 284 GKWREALTLVETENF---VPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTY 340

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            TL+ G     Q+     +L  +   G       +  ++H  C S     A ++L+ M+ 
Sbjct: 341 STLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 400

Query: 531 SRYKPDDTVFSTIVKKVADD 550
             + P   V++ ++  +  D
Sbjct: 401 CGHMPGYVVYNILIGSICGD 420


>gi|356523400|ref|XP_003530328.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g48810-like [Glycine max]
          Length = 664

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 130/471 (27%), Positives = 227/471 (48%), Gaps = 36/471 (7%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD------------------ 151
           G  +E +  T N +L+  C  GKL  A KL+  M++R  +PD                  
Sbjct: 173 GEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVE 232

Query: 152 --------------FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
                            C  LI GL R  R+ +   ++  MV +G  P+ ++Y+ ++  L
Sbjct: 233 EAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWL 292

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
              G++  A+A+L +M   GC P+V T++++++  F  G+  + +G W+  + +G  P +
Sbjct: 293 SDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNV 352

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           + Y  L+  +C    +A A++V   M  +  C P++ TY++LV+   K G    A  V N
Sbjct: 353 VVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWN 412

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +++ G+ PN + Y +++  L     +D   +++D M      PTV T+N  I GLC  G
Sbjct: 413 KMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGG 472

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            V  A+   +QM    C PD  TYN +L  L     L EA +L+  L        L+TYN
Sbjct: 473 RVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYN 532

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           T++ G +  G  E  + + G+M+ NG+ PD IT   +I+ + +  +V  A+  L  I   
Sbjct: 533 TVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRI-TA 591

Query: 497 GNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           G ++     A+  ++ G+C S  ++ AI  L  M++    P+   +  +V+
Sbjct: 592 GKELCPDIIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVR 642



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 115/435 (26%), Positives = 208/435 (47%), Gaps = 33/435 (7%)

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           ++      V + M   G  P+  TYN+++  LCK G++  A  LL EMS  GC PD ++Y
Sbjct: 159 NKFHMIGAVYENMRGEGMEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSY 218

Query: 226 NTILRTMFDNGKFKQA--------------------------------IGFWKDQLRKGC 253
            T++  M ++G+ ++A                                 G   + +  G 
Sbjct: 219 TTVVAAMCEDGRVEEAREVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGV 278

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
            P +++Y+ +I  +     +  A+ VL  M   GC P++ T++SL+      G+  + V 
Sbjct: 279 DPNVVSYSSVISWLSDVGEVELALAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVG 338

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGL 372
           +   ++  G+ PN + YNTLL+ L   G   +AVD    +  +    P V TY+ L++G 
Sbjct: 339 LWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGF 398

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
            K G +  A   +N+MV+   +P++V Y +++  LCK  M ++A +L+  +    C P +
Sbjct: 399 VKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTV 458

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           +T+NT I GL   G +  AM +  QM   G  PD  T+  L+ G    ++++EA +L++E
Sbjct: 459 VTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRE 518

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + +R  ++    Y  V++G     K +  +QVL  M+ +  KPD    + ++   +  G 
Sbjct: 519 LEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGK 578

Query: 553 TEEAYKLWQKLIEWK 567
              A +   ++   K
Sbjct: 579 VRTAIQFLDRITAGK 593



 Score =  153 bits (387), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 106/410 (25%), Positives = 191/410 (46%), Gaps = 6/410 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G++ +   L+D M      P+     ++I  L  +  +E A  VL  M+ 
Sbjct: 251 NALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIR 310

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+  T++ ++ G    G++   + L   M + G  P+V+ YNT+L  +  +G   +
Sbjct: 311 RGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAE 370

Query: 241 AIGFWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           A+       +   C P + TY+ L+    K   +  A EV + M   G  P++V Y S+V
Sbjct: 371 AVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMV 430

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSRGCWDAVDKILDIMNEAS 357
           +  CK   +D A  +I+N+ + G  P  +T+NT +  L  G R  W    +++D M    
Sbjct: 431 DVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAM--RVVDQMQRYG 488

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TYN L++GL     +  A     ++  +  + ++VTYNTV+      G     L
Sbjct: 489 CLPDTRTYNELLDGLFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVL 548

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-ISPDDITHRTLIWG 476
           Q+L  +  +   P  IT N +I   +K G +  A+    ++     + PD I H +L+WG
Sbjct: 549 QVLGRMLVNGVKPDAITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWG 608

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            C +  +EEA+  L ++  +G     + + +++ G  K       I++L+
Sbjct: 609 ICNSLGIEEAIVYLNKMLNKGIFPNIATWDVLVRGFFKKLGHMGPIRILD 658



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 99/403 (24%), Positives = 193/403 (47%), Gaps = 6/403 (1%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG--QIRSAIALLDEMSVSGCEPDVITYN 226
           ++A K+   +   G  P    YN ++  L      +     A+ + M   G EP+V TYN
Sbjct: 125 DRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYN 184

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            +L+ +  NGK   A     +  ++GC P  ++YT ++  +C+   +  A EV      E
Sbjct: 185 VLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAE 244

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G    +   N+L+   C++G+  +   +++ ++  G++PN ++Y++++  L   G  +  
Sbjct: 245 GV---VSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELA 301

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             +L  M      P V T++ L+ G    G V   +  +  MV +  +P++V YNT+L  
Sbjct: 302 LAVLGKMIRRGCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNG 361

Query: 407 LCKEGMLNEALQLLHLLNGSS-CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           LC  G L EA+ +   +     C P + TY+TL+ G  K G ++ A  ++ +M+  G+ P
Sbjct: 362 LCCSGNLAEAVDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRP 421

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           + + + +++   C+    ++A  L+  +   G       +   I GLC   +V  A++V+
Sbjct: 422 NVVVYTSMVDVLCKNSMFDQAYRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVV 481

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + M      PD   ++ ++  +      +EA +L ++L E KV
Sbjct: 482 DQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIRELEERKV 524



 Score =  118 bits (295), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 90/344 (26%), Positives = 158/344 (45%), Gaps = 39/344 (11%)

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIE--GCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
           +TY ++IE++ +   +     +L  M IE   CS D  ++  ++N     G  D A+ + 
Sbjct: 74  LTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQD--SFICVLNSYKNSGLGDRALKMF 131

Query: 316 NNLLSRGMEPNSITYNTLLHSL-GSRGC-WDAVDKILDIMNEASHSPTVFTYNILINGLC 373
             +   G +P    YN LL +L G  G  +  +  + + M      P VFTYN+L+  LC
Sbjct: 132 YRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEGMEPNVFTYNVLLKALC 191

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA--------------------------- 406
           K G +D A     +M  + C PD V+Y TV+ A                           
Sbjct: 192 KNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAREVARRFGAEGVVSVCN 251

Query: 407 -----LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
                LC+EG + E   L+  + G+   P +++Y+++I  L+  G +E A+ + G+M+  
Sbjct: 252 ALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDVGEVELALAVLGKMIRR 311

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G  P+  T  +L+ G+    +V E V L + +   G +     Y  +++GLC S  +  A
Sbjct: 312 GCRPNVHTFSSLMKGYFLGGRVGEGVGLWRVMVLEGVRPNVVVYNTLLNGLCCSGNLAEA 371

Query: 522 IQVLELMISSRY-KPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + V   M    + +P+ T +ST+V      G  + A ++W K++
Sbjct: 372 VDVCGRMEKDCFCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMV 415



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 62/265 (23%), Positives = 126/265 (47%), Gaps = 3/265 (1%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F   +  T + ++  F   G L  AS++ + M      P+     +++  L +    ++A
Sbjct: 383 FCRPNVTTYSTLVHGFVKAGDLQGASEVWNKMVNCGVRPNVVVYTSMVDVLCKNSMFDQA 442

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +++  M   G  P  +T+N  + GLC  G++  A+ ++D+M   GC PD  TYN +L  
Sbjct: 443 YRLIDNMATDGCPPTVVTFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDG 502

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +F   + K+A    ++   +     L+TY  ++            ++VL  M + G  PD
Sbjct: 503 LFSVNELKEACELIRELEERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPD 562

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLS-RGMEPNSITYNTLLHSL-GSRGCWDAVDKI 349
            +T N ++    K GK   A+  ++ + + + + P+ I + +LL  +  S G  +A+  +
Sbjct: 563 AITVNVVIYAYSKLGKVRTAIQFLDRITAGKELCPDIIAHTSLLWGICNSLGIEEAIVYL 622

Query: 350 LDIMNEASHSPTVFTYNILINGLCK 374
             ++N+    P + T+++L+ G  K
Sbjct: 623 NKMLNKGIF-PNIATWDVLVRGFFK 646



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/207 (27%), Positives = 107/207 (51%), Gaps = 5/207 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  ++  C  G++  A +++D M R   +PD      L+ GL  ++ +++A ++++ +
Sbjct: 460 TFNTFIKGLCCGGRVLWAMRVVDQMQRYGCLPDTRTYNELLDGLFSVNELKEACELIREL 519

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                  + +TYN ++ G    G+    + +L  M V+G +PD IT N ++      GK 
Sbjct: 520 EERKVELNLVTYNTVMYGFSSHGKEEWVLQVLGRMLVNGVKPDAITVNVVIYAYSKLGKV 579

Query: 239 KQAIGFWKDQLRKG---CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           + AI F  D++  G   CP  +I +T L+  +C   GI  AI  L+ M  +G  P+I T+
Sbjct: 580 RTAIQFL-DRITAGKELCPD-IIAHTSLLWGICNSLGIEEAIVYLNKMLNKGIFPNIATW 637

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRG 322
           + LV    K+  +   + +++++L +G
Sbjct: 638 DVLVRGFFKKLGHMGPIRILDDILGKG 664



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 54/255 (21%), Positives = 106/255 (41%), Gaps = 34/255 (13%)

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
           A+     + N  +   T  TY+++I  L +   +D      +QM  +       ++  VL
Sbjct: 56  ALQHFQYLTNTLAFKHTPLTYHVMIEKLGRNSELDALHYILHQMKIERIPCSQDSFICVL 115

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV--LYGQMMENG 462
            +    G+ + AL++ + +    C P +  YN L+D L  +   +  M+  +Y  M   G
Sbjct: 116 NSYKNSGLGDRALKMFYRIKEFGCKPTVKIYNHLLDALLGESGNKFHMIGAVYENMRGEG 175

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG---------------------NKMR 501
           + P+  T+  L+   C+  +++ A  LL E+ KRG                      + R
Sbjct: 176 MEPNVFTYNVLLKALCKNGKLDGACKLLVEMSKRGCVPDGVSYTTVVAAMCEDGRVEEAR 235

Query: 502 NSAYRL-----------VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
             A R            +I GLC+  +V     +++ M+ +   P+   +S+++  ++D 
Sbjct: 236 EVARRFGAEGVVSVCNALICGLCREGRVGEVFGLMDEMVGNGVDPNVVSYSSVISWLSDV 295

Query: 551 GMTEEAYKLWQKLIE 565
           G  E A  +  K+I 
Sbjct: 296 GEVELALAVLGKMIR 310


>gi|302784708|ref|XP_002974126.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
 gi|300158458|gb|EFJ25081.1| hypothetical protein SELMODRAFT_100773 [Selaginella moellendorffii]
          Length = 538

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 223/443 (50%), Gaps = 4/443 (0%)

Query: 80  SESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKL 139
           S++  L   K  R    ++     +L +S G  V   E T   ++   C  G    A +L
Sbjct: 19  SQAFTLLATKLFRRSKFSEVVRLFTLLASRG--VVYGETTYKLVVDGLCGAGMANQALEL 76

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK 199
           +  ++     P       +I GL R  R+  A KVL+ MV    VP+  TY +++ GLC+
Sbjct: 77  VRELSG-VYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCR 135

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
             + + A  +  EM  +GC+P+ ITY T+++ +   G+  +A+    +Q     P  +IT
Sbjct: 136 SNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVIT 195

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
            T ++  +CK   +  A++ +++M   G  P+ VTY++LV+   + G+ D  +       
Sbjct: 196 CTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEK 255

Query: 320 SR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           +R G    +  Y   L +L   G  D   K ++ + ++   P V TY++LIN   + G  
Sbjct: 256 ARKGGSLEAAAYPGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQF 315

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D ++     M     +PD+VTY+T++  LCKE    +A +LL L+  +   P ++TYN++
Sbjct: 316 DASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSV 375

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +DGL K G M++   +Y  M+++  SPD +T+  ++ G  +A  ++ AV L + I     
Sbjct: 376 MDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSRE 435

Query: 499 KMRNSAYRLVIHGLCKSKKVDMA 521
               +AY +VI  LC++ K++ A
Sbjct: 436 GPDAAAYSMVITSLCRAGKLEEA 458



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 211/421 (50%), Gaps = 39/421 (9%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+   C   ++ DA K+++ M   + +P+      L+ GL R ++ + A +V Q M  
Sbjct: 92  NGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQEMKR 151

Query: 181 SGGVPDTITYNMM-----------------------------------VGGLCKRGQIRS 205
           +G  P+ ITY  +                                   VGGLCK  ++  
Sbjct: 152 NGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKASRLDD 211

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ-LRKGCPPYLITYTILI 264
           A+  ++EM   G  P+ +TY+ ++     +G+  + I F++++  RKG       Y   +
Sbjct: 212 ALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAYPGYL 271

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           + +CK   + RA + ++++   G  PD+VTY+ L+N   + G++D ++ ++ ++   G++
Sbjct: 272 DALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRRNGVK 331

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P+ +TY+TL++ L     +    ++L++M  A   P V TYN +++GLCK G +D     
Sbjct: 332 PDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRV 391

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           +  M+   C PD+VTY+ ++  L K GML+ A++L  L+  S   P    Y+ +I  L +
Sbjct: 392 YEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSLCR 451

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRT--LIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            G +E+A  +Y   ME  ++ D+I      L+   C A + + A  +++   +RG+++  
Sbjct: 452 AGKLEEACGMY-HGMEVTVAGDNICRALAGLVAALCDAKRTDSARRIVEVARERGHRVTK 510

Query: 503 S 503
           S
Sbjct: 511 S 511



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 117/401 (29%), Positives = 196/401 (48%), Gaps = 2/401 (0%)

Query: 162 LIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
           L R  +  +  ++  ++   G V    TY ++V GLC  G    A+ L+ E+S     P 
Sbjct: 29  LFRRSKFSEVVRLFTLLASRGVVYGETTYKLVVDGLCGAGMANQALELVRELS-GVYTPT 87

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           V  YN I+  +    +   A    +  + +   P + TYTIL+  +C+      A EV  
Sbjct: 88  VFIYNGIITGLCRASRVMDAYKVLEKMVEESIVPNVFTYTILLNGLCRSNKTKLAREVFQ 147

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +M   GC P+ +TY +L+    + G+ D+A+ V+    S  +  + IT  T++  L    
Sbjct: 148 EMKRNGCKPNPITYGTLIQHLSRAGEIDEALRVMIEQRSLELPTDVITCTTIVGGLCKAS 207

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ-MVSKNCQPDIVTY 400
             D   K ++ M +    P   TY+ L++G  ++G +DR I  F +    K    +   Y
Sbjct: 208 RLDDALKFMEEMRQMGVRPNEVTYSNLVHGFRQHGELDRVIRFFEEEKARKGGSLEAAAY 267

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
              L ALCK G L+ A + +  L  S   P ++TY+ LI+  A+ G  + ++ L   M  
Sbjct: 268 PGYLDALCKAGYLDRARKSVEELRQSGVVPDVVTYSMLINTFARAGQFDASLELLEDMRR 327

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           NG+ PD +T+ TLI   C+  + ++A  LL+ +   G+      Y  V+ GLCKS K+D 
Sbjct: 328 NGVKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDE 387

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
             +V E+M+ SR  PD   +S I+  ++  GM + A KL++
Sbjct: 388 VHRVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFE 428



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 99/402 (24%), Positives = 193/402 (48%), Gaps = 9/402 (2%)

Query: 171 ASKVLQIMVMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           A+K+L+  V+  G   D+  + ++   L +R +    + L   ++  G      TY  ++
Sbjct: 2   AAKLLERSVVEAGAKVDSQAFTLLATKLFRRSKFSEVVRLFTLLASRGVVYGETTYKLVV 61

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G   QA+   + +L     P +  Y  +I  +C+   +  A +VL+ M  E   
Sbjct: 62  DGLCGAGMANQALELVR-ELSGVYTPTVFIYNGIITGLCRASRVMDAYKVLEKMVEESIV 120

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++ TY  L+N  C+  K   A  V   +   G +PN ITY TL+  L   G  D   ++
Sbjct: 121 PNVFTYTILLNGLCRSNKTKLAREVFQEMKRNGCKPNPITYGTLIQHLSRAGEIDEALRV 180

Query: 350 LDIMNEASHSPT-VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + I   +   PT V T   ++ GLCK   +D A+    +M     +P+ VTY+ ++    
Sbjct: 181 M-IEQRSLELPTDVITCTTIVGGLCKASRLDDALKFMEEMRQMGVRPNEVTYSNLVHGFR 239

Query: 409 KEGMLNEALQLLH---LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           + G L+  ++         G S       Y   +D L K G +++A     ++ ++G+ P
Sbjct: 240 QHGELDRVIRFFEEEKARKGGSLEAA--AYPGYLDALCKAGYLDRARKSVEELRQSGVVP 297

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D +T+  LI  F RA Q + +++LL+++ + G K     Y  +I+ LCK +K   A ++L
Sbjct: 298 DVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLL 357

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           ELM ++   P+   +++++  +   G  +E +++++ +++ +
Sbjct: 358 ELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSR 399



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 52/210 (24%), Positives = 96/210 (45%), Gaps = 5/210 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  F   G+   + +L++ M R    PD      LI  L +  + + A ++L
Sbjct: 298 DVVTYSMLINTFARAGQFDASLELLEDMRRNGVKPDVVTYSTLINVLCKERKFQDAFRLL 357

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M  +G  P+ +TYN ++ GLCK G++     + + M  S C PDV+TY+ I+  +   
Sbjct: 358 ELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVHRVYEMMLKSRCSPDVVTYSIIMNGLSKA 417

Query: 236 GKFKQAIGFWK--DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           G    A+  ++     R+G  P    Y+++I  +C+   +  A  +   M +     +I 
Sbjct: 418 GMLDSAVKLFELIKSSREG--PDAAAYSMVITSLCRAGKLEEACGMYHGMEVTVAGDNIC 475

Query: 294 -TYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
                LV   C   + D A  ++     RG
Sbjct: 476 RALAGLVAALCDAKRTDSARRIVEVARERG 505



 Score = 65.9 bits (159), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 34/133 (25%), Positives = 72/133 (54%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T + ++   C   K  DA +L+++M      P+     +++ GL +  ++++  
Sbjct: 330 VKPDVVTYSTLINVLCKERKFQDAFRLLELMEAAGSPPNVVTYNSVMDGLCKSGKMDEVH 389

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V ++M+ S   PD +TY++++ GL K G + SA+ L + +  S   PD   Y+ ++ ++
Sbjct: 390 RVYEMMLKSRCSPDVVTYSIIMNGLSKAGMLDSAVKLFELIKSSREGPDAAAYSMVITSL 449

Query: 233 FDNGKFKQAIGFW 245
              GK ++A G +
Sbjct: 450 CRAGKLEEACGMY 462


>gi|357117807|ref|XP_003560653.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Brachypodium distachyon]
          Length = 692

 Score =  199 bits (505), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 116/420 (27%), Positives = 216/420 (51%), Gaps = 4/420 (0%)

Query: 148 QIPD---FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
           Q+P    F F I +I  L +   + +A  +L  M   G  PD +TYN ++ G  K G++ 
Sbjct: 188 QLPAPNVFTFNI-MIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELE 246

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
               L+ EM   GC PDV+TYN ++      G+ ++A  ++ +  R+G    ++T++  +
Sbjct: 247 EVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFV 306

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           +  CK   +  A+++   M ++G  P+ VTY  LV+ +CK G+ DDA+++ N ++ +G+ 
Sbjct: 307 DAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVP 366

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            N +TY  L+  L   G     + +  +M  A        Y  LI+G   Y   +RA++ 
Sbjct: 367 LNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSL 426

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            ++M  K  + D+  Y  ++  LC    L+EA  LL+ ++     P  + Y  ++D   K
Sbjct: 427 LSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFK 486

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
                +A+ L  +MM++G  P+ +T+  L+ G C+A  ++EA+    ++   G +    A
Sbjct: 487 ARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQA 546

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  ++ GLCK+ ++D A+ +L+ MI      D+ V ++++      G  ++A+ L  K+I
Sbjct: 547 YTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMI 606



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 124/447 (27%), Positives = 216/447 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G L +A  L+  M      PD     +LI G  +   +E+  K++  M
Sbjct: 196 TFNIMIDFLCKEGDLAEARALLARMKAIGCSPDVVTYNSLIDGYGKCGELEEVEKLVGEM 255

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD +TYN +V   CK G++  A +   EM   G   +V+T++T +     NG  
Sbjct: 256 RGCGCRPDVVTYNALVNCFCKFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMV 315

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+  +     KG  P  +TYT L++  CK   +  A+ + ++M  +G   ++VTY  L
Sbjct: 316 REAMKLFAQMRMKGMKPNEVTYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVL 375

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  CK+GK  +A  V   +   G+  N + Y TL+H        +    +L  M +   
Sbjct: 376 VDGLCKEGKVAEAEDVFRLMERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGM 435

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              V  Y  LI GLC    +D A +  N+M     +P+ V Y  ++ A  K    +EA+ 
Sbjct: 436 ELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIA 495

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +  S   P ++TY  L+DGL K G +++A+  + +M++ G+ P+   +  L+ G C
Sbjct: 496 LLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLC 555

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  ++++AV LL E+  +G  + N     ++ G  K   +  A  +   MI+S  + D  
Sbjct: 556 KNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLY 615

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++  V    +  M +EA ++  ++IE
Sbjct: 616 GYTCFVWGFCNLNMIQEAREVLSEMIE 642



 Score =  174 bits (442), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 203/418 (48%), Gaps = 37/418 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +   G+L +  KL+  M      PD      L+    +  R+E+A    
Sbjct: 228 DVVTYNSLIDGYGKCGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFCKFGRMERAYSYF 287

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G + + +T++  V   CK G +R A+ L  +M + G +P+ +TY  ++      
Sbjct: 288 AEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEVTYTCLVDGTCKA 347

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA--------------------- 274
           G+   A+    + +++G P  ++TYT+L++ +CK+  +A                     
Sbjct: 348 GRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLMERAGIRANELLY 407

Query: 275 --------------RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
                         RA+ +L +M  +G   D+  Y +L+   C   K D+A  ++N +  
Sbjct: 408 TTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKLDEAKSLLNKMDE 467

Query: 321 RGMEPNSITYNTLLHS-LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            G++PN++ Y  ++ +   +R   +A+  +L  M ++   P + TY  L++GLCK G +D
Sbjct: 468 CGLKPNNVIYTNIMDACFKARKESEAI-ALLQKMMDSGFRPNIVTYCALVDGLCKAGSID 526

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            AI+ FN+MV    +P++  Y  ++  LCK G L++A+ LL  +     S   +   +L+
Sbjct: 527 EAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLM 586

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           DG  K+G ++ A  L  +M+ +G+  D   +   +WGFC  + ++EA ++L E+ + G
Sbjct: 587 DGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENG 644



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 121/442 (27%), Positives = 211/442 (47%), Gaps = 22/442 (4%)

Query: 136 ASKLIDIM--------ARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV 184
           A+ L+D++         RR+ +P   D    +   RGL+  D +   ++V ++ V     
Sbjct: 106 AASLVDLLHRAALALGPRRSALPSVVDTLLSLLADRGLLD-DAVLALARVRELRV----P 160

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+T T N ++  L +      A  L +++      P+V T+N ++  +   G   +A   
Sbjct: 161 PNTRTCNHILLCLARERSSELAWRLFEQLPA----PNVFTFNIMIDFLCKEGDLAEARAL 216

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE-VLDDMAIEGCSPDIVTYNSLVNFSC 303
                  GC P ++TY  LI+   K CG    +E ++ +M   GC PD+VTYN+LVN  C
Sbjct: 217 LARMKAIGCSPDVVTYNSLIDGYGK-CGELEEVEKLVGEMRGCGCRPDVVTYNALVNCFC 275

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K G+ + A      +   G+  N +T++T + +    G      K+   M      P   
Sbjct: 276 KFGRMERAYSYFAEMKREGVMANVVTFSTFVDAFCKNGMVREAMKLFAQMRMKGMKPNEV 335

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TY  L++G CK G +D A+   N+MV +    ++VTY  ++  LCKEG + EA  +  L+
Sbjct: 336 TYTCLVDGTCKAGRLDDALVLTNEMVQQGVPLNVVTYTVLVDGLCKEGKVAEAEDVFRLM 395

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
             +      + Y TLI G       E+A+ L  +M + G+  D   +  LIWG C   ++
Sbjct: 396 ERAGIRANELLYTTLIHGHFVYKNSERALSLLSEMKDKGMELDVSLYGALIWGLCNLQKL 455

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA  LL ++ + G K  N  Y  ++    K++K   AI +L+ M+ S ++P+   +  +
Sbjct: 456 DEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCAL 515

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           V  +   G  +EA   + K+++
Sbjct: 516 VDGLCKAGSIDEAISHFNKMVD 537



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 112/233 (48%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL  + ++++A  +L  M   G  P+ + Y  ++    K  +   AIALL +M  SG
Sbjct: 445 LIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAIALLQKMMDSG 504

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P+++TY  ++  +   G   +AI  +   +  G  P +  YT L++ +CK   + +A+
Sbjct: 505 FRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAV 564

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +LD+M  +G S D V   SL++   KQG   DA  +   +++ G++ +   Y   +   
Sbjct: 565 LLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGF 624

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
            +        ++L  M E   +P    YN LIN   K G ++ A    N+M S
Sbjct: 625 CNLNMIQEAREVLSEMIENGITPDAVVYNCLINKCQKLGNMEEAAILQNEMES 677



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 57/223 (25%), Positives = 104/223 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      ++   C+  KL +A  L++ M      P+     N++    +  +  +A 
Sbjct: 435 MELDVSLYGALIWGLCNLQKLDEAKSLLNKMDECGLKPNNVIYTNIMDACFKARKESEAI 494

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +LQ M+ SG  P+ +TY  +V GLCK G I  AI+  ++M   G EP+V  Y  ++  +
Sbjct: 495 ALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAISHFNKMVDLGLEPNVQAYTALVDGL 554

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG+  +A+    + + KG     +  T L++   KQ  +  A  +   M   G   D+
Sbjct: 555 CKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAFALKAKMINSGLQLDL 614

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
             Y   V   C      +A  V++ ++  G+ P+++ YN L++
Sbjct: 615 YGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLIN 657



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 61/207 (29%), Positives = 90/207 (43%), Gaps = 4/207 (1%)

Query: 118 KTNNKILQNF---CSRG-KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           K NN I  N    C +  K ++A  L+  M      P+      L+ GL +   I++A  
Sbjct: 471 KPNNVIYTNIMDACFKARKESEAIALLQKMMDSGFRPNIVTYCALVDGLCKAGSIDEAIS 530

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
               MV  G  P+   Y  +V GLCK G++  A+ LLDEM   G   D +   +++    
Sbjct: 531 HFNKMVDLGLEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHL 590

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G  + A       +  G    L  YT  +   C    I  A EVL +M   G +PD V
Sbjct: 591 KQGNLQDAFALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAV 650

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLS 320
            YN L+N   K G  ++A ++ N + S
Sbjct: 651 VYNCLINKCQKLGNMEEAAILQNEMES 677



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 57/129 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E + +    ++   C  G+L  A  L+D M  +    D   C +L+ G ++   ++ A 
Sbjct: 540 LEPNVQAYTALVDGLCKNGRLDKAVLLLDEMIDKGMSLDNVVCTSLMDGHLKQGNLQDAF 599

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M+ SG   D   Y   V G C    I+ A  +L EM  +G  PD + YN ++   
Sbjct: 600 ALKAKMINSGLQLDLYGYTCFVWGFCNLNMIQEAREVLSEMIENGITPDAVVYNCLINKC 659

Query: 233 FDNGKFKQA 241
              G  ++A
Sbjct: 660 QKLGNMEEA 668


>gi|297842914|ref|XP_002889338.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335180|gb|EFH65597.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 712

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 130/463 (28%), Positives = 234/463 (50%), Gaps = 20/463 (4%)

Query: 123 ILQNFCSRGKLTDASK--LIDIMARRN---QIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++  F  R +  +A++  L  I  R N   ++ D +F  +LIR        +++  + Q 
Sbjct: 108 LMLEFLGRARNLNAARNFLFSIEKRSNGCVKLQDRYFN-SLIRSYGNAGLFQESVNLFQT 166

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNG 236
           M   G  P  +T+N ++  L KRG+   A  + DEM  + G  PD  T+NT++     N 
Sbjct: 167 MKKMGISPSVLTFNSLLSILLKRGRTGMAHDMFDEMRRTYGVTPDSYTFNTLISGFCKNS 226

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS--PDIVT 294
              QA   +K+     C P ++TY  +I+ +C+   +  A  +L+ M  +  +  P+IV+
Sbjct: 227 MVDQAFTIFKEMELYSCNPDVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVS 286

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +L+   C + + D+A+LV + +L+RG++PN++TYNTL+  L     +D +   L I  
Sbjct: 287 YTTLLRGYCMKQEIDEALLVFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFL-IGG 345

Query: 355 EA--SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC---- 408
           +A  + SP   T+NILI   C  G +D A+  F +M++    PD  +Y+ ++  LC    
Sbjct: 346 DAFTTFSPDACTFNILIKAHCDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNE 405

Query: 409 ---KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
               E + NE  +   LL  + C P    YN + + L   G  ++A  ++ Q+M+ G + 
Sbjct: 406 FDKAETLFNELFEKEVLLGKNECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRG-AQ 464

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D  ++RTLI G CR  + + A +LL  + +R        Y ++I GL K  +  +A   L
Sbjct: 465 DPSSYRTLITGLCREGKFKAAYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTL 524

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + M+ S Y P  T F +++ ++       +++ L   ++E ++
Sbjct: 525 QRMLRSSYLPVATTFHSVLAELVKRKFANDSFGLLTVMLEKRI 567



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 117/457 (25%), Positives = 205/457 (44%), Gaps = 14/457 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+  ++  N +++++ + G   ++  L   M +    P      +L+  L++  R   A 
Sbjct: 137 VKLQDRYFNSLIRSYGNAGLFQESVNLFQTMKKMGISPSVLTFNSLLSILLKRGRTGMAH 196

Query: 173 KVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +   M  + GV PD+ T+N ++ G CK   +  A  +  EM +  C PDV+TYNTI+  
Sbjct: 197 DMFDEMRRTYGVTPDSYTFNTLISGFCKNSMVDQAFTIFKEMELYSCNPDVVTYNTIIDG 256

Query: 232 MFDNGKFKQAIGFWKDQLRKGCP--PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           +   GK K A       L+K     P +++YT L+   C +  I  A+ V  +M   G  
Sbjct: 257 LCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALLVFHEMLTRGLK 316

Query: 290 PDIVTYNSLVNFSCKQGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           P+ VTYN+L+    +  +YD+    +I         P++ T+N L+ +    G  DA  K
Sbjct: 317 PNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAHCDAGHLDAAMK 376

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-------NCQPDIVTYN 401
           +   M      P   +Y++LI  LC     D+A   FN++  K        C+P    YN
Sbjct: 377 VFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGKNECKPLAAAYN 436

Query: 402 TVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
            +   LC  G   +A ++   L+   +  P   +Y TLI GL ++G  + A  L   M+ 
Sbjct: 437 LMFEYLCANGKAKQAEKVFRQLMKRGAQDPS--SYRTLITGLCREGKFKAAYELLVLMLR 494

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
               PD  T+  LI G  +  +   A D L+ + +       + +  V+  L K K  + 
Sbjct: 495 REFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLAELVKRKFAND 554

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           +  +L +M+  R + +  + +  V+ V      E+A+
Sbjct: 555 SFGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEKAF 591



 Score =  113 bits (283), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 111/468 (23%), Positives = 194/468 (41%), Gaps = 44/468 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASK 173
           D  T N I+   C  GK+  A  L++ M ++     P+      L+RG      I++A  
Sbjct: 246 DVVTYNTIIDGLCRAGKVKIAHNLLNGMLKKATAVHPNIVSYTTLLRGYCMKQEIDEALL 305

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA-LLDEMSVSGCEPDVITYNTILRTM 232
           V   M+  G  P+ +TYN ++ GL +  +       L+   + +   PD  T+N +++  
Sbjct: 306 VFHEMLTRGLKPNAVTYNTLIKGLSEAHRYDEIKGFLIGGDAFTTFSPDACTFNILIKAH 365

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM-------AI 285
            D G    A+  +++ L     P   +Y++LI  +C +    +A  + +++         
Sbjct: 366 CDAGHLDAAMKVFQEMLNMKLHPDSASYSVLIRTLCLRNEFDKAETLFNELFEKEVLLGK 425

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
             C P    YN +  + C  GK   A  V   L+ RG +  S +Y TL+  L   G + A
Sbjct: 426 NECKPLAAAYNLMFEYLCANGKAKQAEKVFRQLMKRGAQDPS-SYRTLITGLCREGKFKA 484

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             ++L +M      P   TY +LI+GL K G    A ++  +M+  +  P   T+++VL 
Sbjct: 485 AYELLVLMLRREFVPDPETYEVLIDGLLKIGEALLAHDTLQRMLRSSYLPVATTFHSVLA 544

Query: 406 ALCKEGMLNEALQLLHL------------------LNGSSCSP--------------CLI 433
            L K    N++  LL +                  L  SS                  LI
Sbjct: 545 ELVKRKFANDSFGLLTVMLEKRIRQNIDLSTQAVRLVFSSAQKEKAFLIVRLLYDNGYLI 604

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
               L+D L +   +  A  L    +E     D  T  T+I G C+  +  EA  L  E+
Sbjct: 605 KMEELLDFLCENRKLLDAHTLVLFCLEKSQMVDIDTCNTIIEGLCKHKRHSEAFSLYNEL 664

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            + GN  + S + ++ + L  + K +  +Q +   +++  K D+   S
Sbjct: 665 VELGNHQQLSCHVVLTNALEAAGKWE-ELQFVSKRMATMRKSDNCAVS 711


>gi|255586501|ref|XP_002533891.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223526155|gb|EEF28491.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 701

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/414 (27%), Positives = 208/414 (50%), Gaps = 36/414 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G+  ++ ++ + M +  +  D     +LI GL     I+ A +V + +
Sbjct: 259 TYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEI 318

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V S  V D +T+N M+ G C+ G+I+ +  L   M    C+  V++YN +++ +F+NGK 
Sbjct: 319 VESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKV 377

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++AI  W+   +KGC P   TY +LI  +CK   + +A+++  +        D   Y+S+
Sbjct: 378 EEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSM 437

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGME---------------------------------- 324
           V+  CK+G+ D+A+ ++N +  RG +                                  
Sbjct: 438 VDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMECKGC 497

Query: 325 -PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P  ++YNTL+  L     +      +  M E    P + T ++L++GLC+   ++ A+N
Sbjct: 498 SPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALN 557

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            + Q + K  +PDI  YN ++  LC    L +ALQL   +  S+C P L+T NTL++GL 
Sbjct: 558 LWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLMEGLY 617

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           K    EKA  ++  ++++G+ PD I++   I G C   ++ +A++ L +   RG
Sbjct: 618 KVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFLNDALNRG 671



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/435 (27%), Positives = 218/435 (50%), Gaps = 10/435 (2%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMSGGV-PDTI 188
           G L  A K+ D M+ R  + D   C N LI G  +    +K  ++ + +V    V P+ +
Sbjct: 200 GDLLGALKVFDEMSVRGVVADVT-CYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVV 258

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TYN+M+ GLCK G+   ++ + + M+ +  E D+ TY++++  + + G    A+  +K+ 
Sbjct: 259 TYNIMINGLCKCGRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEI 318

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +        +T+  ++   C+   I  + E+   M  E C   +V+YN L+    + GK 
Sbjct: 319 VESSLVVDAVTHNAMLNGFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKV 377

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP---TVFTY 365
           ++A+ +   L  +G  P S TY  L+H L   G    ++K L I  EA   P     + Y
Sbjct: 378 EEAISIWELLCKKGCRPESTTYGVLIHGLCKNG---RLNKALKIFKEAEDGPGKLDAYAY 434

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           + +++GLCK G +D AI+  NQM  +  + D    N ++    +   L +A+     +  
Sbjct: 435 SSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREMEC 494

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
             CSP +++YNTLI GL K     +A     +M+E    PD IT   L+ G C+  ++E 
Sbjct: 495 KGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEM 554

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A++L ++   +G K   + Y +++HGLC   K++ A+Q+   M  S   P+    +T+++
Sbjct: 555 ALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVPNLVTRNTLME 614

Query: 546 KVADDGMTEEAYKLW 560
            +      E+A ++W
Sbjct: 615 GLYKVRDYEKASEIW 629



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/450 (26%), Positives = 231/450 (51%), Gaps = 8/450 (1%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T N +++  C + ++  A  L+D M  +N  PD      LI G++++  +  A KV   
Sbjct: 152 QTYNILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDE 211

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE--PDVITYNTILRTMFDN 235
           M + G V D   YNM++ G  K G       + + + V  C   P+V+TYN ++  +   
Sbjct: 212 MSVRGVVADVTCYNMLIDGFFKHGDYDKGKEIWERL-VKDCSVYPNVVTYNIMINGLCKC 270

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+F +++  W+   +      + TY+ LI  +C+   I  A+ V  ++       D VT+
Sbjct: 271 GRFDESLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTH 330

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++N  C+ GK  ++   +  ++ +      ++YN L+  L   G  +    I +++ +
Sbjct: 331 NAMLNGFCRAGKIKES-FELWMVMGKENCQTVVSYNILIKGLFENGKVEEAISIWELLCK 389

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TY +LI+GLCK G +++A+  F +      + D   Y++++  LCKEG ++E
Sbjct: 390 KGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDE 449

Query: 416 ALQLLHLLN--GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           A+ +++ ++  G    P +   N LI+G  +   +E A+  + +M   G SP  +++ TL
Sbjct: 450 AISIVNQMDKRGYKLDPHVC--NPLINGFVRASKLEDAINFFREMECKGCSPTIVSYNTL 507

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G C+A++  EA   +KE+ ++  K       L++ GLC+ KK++MA+ + +  +   +
Sbjct: 508 IKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMDGLCQEKKIEMALNLWQQALDKGF 567

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           KPD T+++ ++  +      E+A +L+  +
Sbjct: 568 KPDITMYNILMHGLCSVCKLEDALQLYSHM 597



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/458 (25%), Positives = 211/458 (46%), Gaps = 39/458 (8%)

Query: 144 ARRNQIPDFHFCINLIRGLIRIDR-IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           A RN+    H   +++R L    R +   S+++ I+              ++    K   
Sbjct: 36  ASRNKSHSAHVFHHILRRLAADSRLVSHVSRIVDIVKAQKCPCKEDVALTVIKAYAKNKM 95

Query: 203 IRSAIALLDEMS-VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
              A+     M  + GC+P V +YNT+L    +  ++ +A  F +        P L TY 
Sbjct: 96  SNKALDTFQNMQDIFGCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYN 155

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           ILI+  CK+  I +AI +LD M  +   PD+ +Y +L+N   K G    A+ V + +  R
Sbjct: 156 ILIKISCKKQQIEKAISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVR 215

Query: 322 G------------------------------------MEPNSITYNTLLHSLGSRGCWDA 345
           G                                    + PN +TYN +++ L   G +D 
Sbjct: 216 GVVADVTCYNMLIDGFFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDE 275

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             +I + M +      +FTY+ LI+GLC+ G +D A+  + ++V  +   D VT+N +L 
Sbjct: 276 SLEIWERMTKNEREKDMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLN 335

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
             C+ G + E+ +L  ++   +C   +++YN LI GL + G +E+A+ ++  + + G  P
Sbjct: 336 GFCRAGKIKESFELWMVMGKENCQT-VVSYNILIKGLFENGKVEEAISIWELLCKKGCRP 394

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           +  T+  LI G C+  ++ +A+ + KE      K+   AY  ++ GLCK  ++D AI ++
Sbjct: 395 ESTTYGVLIHGLCKNGRLNKALKIFKEAEDGPGKLDAYAYSSMVDGLCKEGRMDEAISIV 454

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             M    YK D  V + ++         E+A   ++++
Sbjct: 455 NQMDKRGYKLDPHVCNPLINGFVRASKLEDAINFFREM 492



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 150/321 (46%), Gaps = 35/321 (10%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++     GK+ +A  + +++ ++   P+      LI GL +  R+ KA K+ +    
Sbjct: 365 NILIKGLFENGKVEEAISIWELLCKKGCRPESTTYGVLIHGLCKNGRLNKALKIFKEAED 424

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLD----------------------------- 211
             G  D   Y+ MV GLCK G++  AI++++                             
Sbjct: 425 GPGKLDAYAYSSMVDGLCKEGRMDEAISIVNQMDKRGYKLDPHVCNPLINGFVRASKLED 484

Query: 212 ------EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
                 EM   GC P +++YNT+++ +    +F +A  F K+ L K   P +IT ++L++
Sbjct: 485 AINFFREMECKGCSPTIVSYNTLIKGLCKAERFSEAYSFVKEMLEKEWKPDMITCSLLMD 544

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
            +C++  I  A+ +      +G  PDI  YN L++  C   K +DA+ + +++      P
Sbjct: 545 GLCQEKKIEMALNLWQQALDKGFKPDITMYNILMHGLCSVCKLEDALQLYSHMKRSTCVP 604

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N +T NTL+  L     ++   +I D + +    P + +YNI I GLC    +  AI   
Sbjct: 605 NLVTRNTLMEGLYKVRDYEKASEIWDCILKDGLHPDIISYNITIKGLCSCSRISDAIEFL 664

Query: 386 NQMVSKNCQPDIVTYNTVLGA 406
           N  +++   P  VT+N ++ A
Sbjct: 665 NDALNRGILPTAVTWNILVRA 685



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 133/260 (51%), Gaps = 9/260 (3%)

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G +P   +YNTLL++      WD  +           SP + TYNILI   CK   +++A
Sbjct: 111 GCKPGVRSYNTLLNAFVELNEWDRAESFSRYFESMDVSPNLQTYNILIKISCKKQQIEKA 170

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           I+  + M S+N +PD+ +Y T++  + K G L  AL++   ++       +  YN LIDG
Sbjct: 171 ISLLDWMWSQNLKPDVFSYGTLINGMVKVGDLLGALKVFDEMSVRGVVADVTCYNMLIDG 230

Query: 442 LAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
             K G  +K   ++ +++++  + P+ +T+  +I G C+  + +E++++ + + K   + 
Sbjct: 231 FFKHGDYDKGKEIWERLVKDCSVYPNVVTYNIMINGLCKCGRFDESLEIWERMTKNEREK 290

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  +IHGLC++  +D A++V + ++ S    D    + ++      G  +E+++LW
Sbjct: 291 DMFTYSSLIHGLCEAGNIDGAVRVYKEIVESSLVVDAVTHNAMLNGFCRAGKIKESFELW 350

Query: 561 --------QKLIEWKVFEKG 572
                   Q ++ + +  KG
Sbjct: 351 MVMGKENCQTVVSYNILIKG 370


>gi|55709857|gb|AAV58825.1| hypothetical protein [Arabidopsis thaliana]
          Length = 946

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 128/488 (26%), Positives = 227/488 (46%), Gaps = 51/488 (10%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            CS GK   A  +I  M  +  IPD      ++  L    ++E A  + + M   G V D
Sbjct: 417 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLVAD 476

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY +MV   CK G I  A    +EM   GC P+V+TY  ++       K   A   ++
Sbjct: 477 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 536

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI-------------- 292
             L +GC P ++TY+ LI+  CK   + +A ++ + M      PD+              
Sbjct: 537 TMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSERP 596

Query: 293 --VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
             VTY +L++  CK  + ++A  +++ +   G EPN I Y+ L+  L   G  D   ++ 
Sbjct: 597 NVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEVK 656

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M+E     T++TY+ LI+   K    D A    ++M+  +C P++V Y  ++  LCK 
Sbjct: 657 TEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCKV 716

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G  +EA +L+ ++    C P ++TY  +IDG    G +E  + L  +M   G++P+ +T+
Sbjct: 717 GKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKGVAPNYVTY 776

Query: 471 RTLIWGFCRADQVE---------------------------------EAVDLLKEIGKRG 497
           R LI   C+   ++                                 E++ LL EIG+  
Sbjct: 777 RVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRKVIEGFNKEFIESLGLLDEIGQDD 836

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLE--LMISSRYKPDDTVFSTIVKKVADDGMTEE 555
                S YRL+I  L K+++++MA+++LE     S+      + ++++++ +      E 
Sbjct: 837 TAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVET 896

Query: 556 AYKLWQKL 563
           A++L+ ++
Sbjct: 897 AFQLFSEM 904



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 127/497 (25%), Positives = 221/497 (44%), Gaps = 60/497 (12%)

Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
           + C  GK  +A  L++     N +PD  F   LI GL      E+A   L  M  +  +P
Sbjct: 238 SLCKVGKWREALTLVET---ENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 294

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + +TY+ ++ G   + Q+     +L+ M + GC P    +N+++     +G    A    
Sbjct: 295 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 354

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCG------IARAIEVLDDMAIEGCSPDIVTYNSLV 299
           K  ++ G  P  + Y ILI  +C          +  A +   +M   G   + +  +S  
Sbjct: 355 KKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKINVSSFT 414

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C  GKY+ A  VI  ++ +G  P++ TY+ +L+ L +    +    + + M      
Sbjct: 415 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMKRGGLV 474

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             V+TY I+++  CK GL+++A   FN+M    C P++VTY  ++ A  K   ++ A +L
Sbjct: 475 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 534

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM----------------ENGI 463
              +    C P ++TY+ LIDG  K G +EKA  ++ +M                 +N  
Sbjct: 535 FETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPDVDMYFKQYDDNSE 594

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC---------- 513
            P+ +T+  L+ GFC++ +VEEA  LL  +   G +     Y  +I GLC          
Sbjct: 595 RPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQE 654

Query: 514 -------------------------KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
                                    K K+ D+A +VL  M+ +   P+  +++ ++  + 
Sbjct: 655 VKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLC 714

Query: 549 DDGMTEEAYKLWQKLIE 565
             G T+EAYKL Q + E
Sbjct: 715 KVGKTDEAYKLMQMMEE 731



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 118/428 (27%), Positives = 202/428 (47%), Gaps = 20/428 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +    K++ A++L + M     +P+      LI G  +  ++EKA ++ + M
Sbjct: 514 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERM 573

Query: 179 VMSGGVPDT----------------ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
             S  VPD                 +TY  ++ G CK  ++  A  LLD MS+ GCEP+ 
Sbjct: 574 CGSKDVPDVDMYFKQYDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQ 633

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           I Y+ ++  +   GK  +A     +    G P  L TY+ LI++  K      A +VL  
Sbjct: 634 IVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSK 693

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M    C+P++V Y  +++  CK GK D+A  ++  +  +G +PN +TY  ++   G  G 
Sbjct: 694 MLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGK 753

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            +   ++L+ M     +P   TY +LI+  CK G +D A N   +M   +       Y  
Sbjct: 754 IETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAGYRK 813

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           V+    KE +  E+L LL  +     +P L  Y  LID L K   +E A+ L  ++    
Sbjct: 814 VIEGFNKEFI--ESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEVATFS 871

Query: 463 ISPDDI--THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            +  D   T+ +LI   C A++VE A  L  E+ K+G      ++  +I GL ++ K+  
Sbjct: 872 ATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFRNSKISE 931

Query: 521 AIQVLELM 528
           A+ +L+ +
Sbjct: 932 ALLLLDFI 939



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/462 (24%), Positives = 206/462 (44%), Gaps = 61/462 (13%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGG---------------------------------- 196
           A K+L+ MV  G +P  + YN+++G                                   
Sbjct: 350 AYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLAAGVVLNKIN 409

Query: 197 -------LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
                  LC  G+   A +++ EM   G  PD  TY+ +L  + +  K + A   +++  
Sbjct: 410 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASKMELAFLLFEEMK 469

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R G    + TYTI+++  CK   I +A +  ++M   GC+P++VTY +L++   K  K  
Sbjct: 470 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 529

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHS-----------------LGSRGCWDAVDKILDI 352
            A  +   +LS G  PN +TY+ L+                    GS+   D VD     
Sbjct: 530 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQIFERMCGSKDVPD-VDMYFKQ 588

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
            ++ S  P V TY  L++G CK   V+ A    + M  + C+P+ + Y+ ++  LCK G 
Sbjct: 589 YDDNSERPNVVTYGALLDGFCKSHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 648

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EA ++   ++       L TY++LID   K    + A  +  +M+EN  +P+ + +  
Sbjct: 649 LDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 708

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G C+  + +EA  L++ + ++G +     Y  +I G     K++  +++LE M S  
Sbjct: 709 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGMIGKIETCLELLERMGSKG 768

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL--IEWKVFEKG 572
             P+   +  ++     +G  + A+ L +++    W     G
Sbjct: 769 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTAG 810



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 107/432 (24%), Positives = 196/432 (45%), Gaps = 29/432 (6%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN------LIRGLIRIDRIEKASKV 174
           N +++  C  G  + A      +    ++ DF F  +      LI+  ++ DR++ AS +
Sbjct: 163 NVLVRKHCRNGSFSIA------LEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLI 216

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            + M ++    D  T       LCK G+ R A+ L++  +     PD + Y  ++  + +
Sbjct: 217 HREMSLANLRMDGFTLRCFAYSLCKVGKWREALTLVETENFV---PDTVFYTKLISGLCE 273

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
              F++A+ F        C P ++TY+ L+     +  + R   VL+ M +EGC P    
Sbjct: 274 ASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKI 333

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +NSLV+  C  G +  A  ++  ++  G  P  + YN L+ S+    C D      D+++
Sbjct: 334 FNSLVHAYCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSI----CGDKDSLNFDLLD 389

Query: 355 EASHSPT-VFTYNILING---------LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
            A  + + +    +++N          LC  G  ++A +   +M+ +   PD  TY+ VL
Sbjct: 390 LAEKAYSEMLAAGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVL 449

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LC    +  A  L   +        + TY  ++D   K G +E+A   + +M E G +
Sbjct: 450 NYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCT 509

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P+ +T+  LI  + +A +V  A +L + +   G       Y  +I G CK+ +V+ A Q+
Sbjct: 510 PNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQVEKACQI 569

Query: 525 LELMISSRYKPD 536
            E M  S+  PD
Sbjct: 570 FERMCGSKDVPD 581



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 77/319 (24%), Positives = 148/319 (46%), Gaps = 8/319 (2%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E ++   + ++   C  GKL +A ++   M+        +   +LI    ++ R + ASK
Sbjct: 630 EPNQIVYDALIDGLCKVGKLDEAQEVKTEMSEHGFPATLYTYSSLIDRYFKVKRQDLASK 689

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL  M+ +   P+ + Y  M+ GLCK G+   A  L+  M   GC+P+V+TY  ++    
Sbjct: 690 VLSKMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFG 749

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK +  +   +    KG  P  +TY +LI+  CK   +  A  +L++M          
Sbjct: 750 MIGKIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHTA 809

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y  ++    K+  + +++ +++ +      P    Y  L+ +L      +   ++L+ +
Sbjct: 810 GYRKVIEGFNKE--FIESLGLLDEIGQDDTAPFLSVYRLLIDNLIKAQRLEMALRLLEEV 867

Query: 354 NEASHSPTVF----TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
             A+ S T+     TYN LI  LC    V+ A   F++M  K   P++ ++ +++  L +
Sbjct: 868 --ATFSATLVDYSSTYNSLIESLCLANKVETAFQLFSEMTKKGVIPEMQSFCSLIKGLFR 925

Query: 410 EGMLNEALQLLHLLNGSSC 428
              ++EAL LL  ++   C
Sbjct: 926 NSKISEALLLLDFISHMVC 944



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 73/311 (23%), Positives = 137/311 (44%), Gaps = 15/311 (4%)

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           +L+ + C+    + A+E L  +      P   TYN L+    K  + D A L+   +   
Sbjct: 164 VLVRKHCRNGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLA 223

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            +  +  T     +SL   G W    + L ++   +  P    Y  LI+GLC+  L + A
Sbjct: 224 NLRMDGFTLRCFAYSLCKVGKW---REALTLVETENFVPDTVFYTKLISGLCEASLFEEA 280

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           ++  N+M + +C P++VTY+T+L     +  L    ++L+++    C P    +N+L+  
Sbjct: 281 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 340

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC---------RADQVEEAVDLLKE 492
               G    A  L  +M++ G  P  + +  LI   C           D  E+A   +  
Sbjct: 341 YCTSGDHSYAYKLLKKMVKCGHMPGYVVYNILIGSICGDKDSLNFDLLDLAEKAYSEMLA 400

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
            G   NK+  S++      LC + K + A  V+  MI   + PD + +S ++  + +   
Sbjct: 401 AGVVLNKINVSSF---TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLNYLCNASK 457

Query: 553 TEEAYKLWQKL 563
            E A+ L++++
Sbjct: 458 MELAFLLFEEM 468



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 62/260 (23%), Positives = 104/260 (40%), Gaps = 11/260 (4%)

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI----L 350
           YN+LV+   +    DD   V    L +  + +   +   L+ L  + C +    I    L
Sbjct: 127 YNALVDLIVR----DDDEKVPEEFLQQIRDDDKEVFGQFLNVLVRKHCRNGSFSIALEEL 182

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             + +    P+  TYN LI    K   +D A     +M   N + D  T      +LCK 
Sbjct: 183 GRLKDFRFRPSRSTYNCLIQAFLKADRLDSASLIHREMSLANLRMDGFTLRCFAYSLCKV 242

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G   EAL L+   N     P  + Y  LI GL +    E+AM    +M      P+ +T+
Sbjct: 243 GKWREALTLVETEN---FVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTY 299

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            TL+ G     Q+     +L  +   G       +  ++H  C S     A ++L+ M+ 
Sbjct: 300 STLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVK 359

Query: 531 SRYKPDDTVFSTIVKKVADD 550
             + P   V++ ++  +  D
Sbjct: 360 CGHMPGYVVYNILIGSICGD 379


>gi|449438480|ref|XP_004137016.1| PREDICTED: pentatricopeptide repeat-containing protein At1g03560,
           mitochondrial-like [Cucumis sativus]
          Length = 651

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 115/410 (28%), Positives = 210/410 (51%), Gaps = 5/410 (1%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E   N ++++F + G + +   +   M      P  +    L+ GL+    IE A KV +
Sbjct: 183 ESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFE 242

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
           +M     VPDT+TYN+M+ G CK G+++ A+    +M +   +PD ITY T+++  +   
Sbjct: 243 VMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSER 302

Query: 237 KFKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            F   +  + +   +G   PP+  +Y+++I  +CKQ     A  V + M  +GC  ++  
Sbjct: 303 DFDTCLSLYLEMEERGLEIPPH--SYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAI 360

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y +L++   K G  ++A+ +   + + G EP+++TY+ L++ L   G  D   ++ D   
Sbjct: 361 YTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCR 420

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               +     Y  LI+GL K G ++ A N F +M  K C  D   YN ++ AL K G ++
Sbjct: 421 NKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKID 480

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +AL L   +    C   + T+  LIDGL K+   E+A+  + +M++ GI+P   + R L 
Sbjct: 481 QALALFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALA 540

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
            G C   +V  A  +L ++   G  +  +A+  +I+ LCK++++  A ++
Sbjct: 541 IGLCLCGKVARACKILDDLAPMG-IIPETAFEDMINTLCKAQRIKEACKL 589



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 87/340 (25%), Positives = 162/340 (47%)

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           N+++++  + G  ++ +  W+     G  P L TY  L+  +     I  A +V + M  
Sbjct: 187 NSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGLVNSMFIESAEKVFEVMDG 246

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
               PD VTYN ++   CK GK   A+    ++  + ++P+ ITY TL+ +  S   +D 
Sbjct: 247 GKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDFDT 306

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
              +   M E        +Y+++I GLCK      A   F  M  K C+ ++  Y  ++ 
Sbjct: 307 CLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTALID 366

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
           +  K G + EA++L   +      P  +TY+ L++GL K G ++  M L+      G++ 
Sbjct: 367 SYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGVAI 426

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           + + + +LI G  +A ++E+A +L +E+ ++G    +  Y  +I  L K  K+D A+ + 
Sbjct: 427 NAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALALF 486

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             M           F+ ++  +  +   EEA K W K+I+
Sbjct: 487 GRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMID 526



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 101/425 (23%), Positives = 187/425 (44%), Gaps = 36/425 (8%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG  +  D  T N +++ +C  GKL  A +    M  +N  PD    + LI+        
Sbjct: 245 DGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDKITYMTLIQACYSERDF 304

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           +    +   M   G      +Y++++GGLCK+ +   A A+ + M+  GC  +V  Y  +
Sbjct: 305 DTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFETMNQKGCRANVAIYTAL 364

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           + +   NG  ++A+  ++    +G  P  +TY++L+  +CK   +   +E+ D    +G 
Sbjct: 365 IDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGRLDDGMELFDFCRNKGV 424

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           + + + Y SL++   K G+ +DA  +   +  +G   +S  YN ++ +L   G  D    
Sbjct: 425 AINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNAIIDALAKHGKIDQALA 484

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +   M E     TV+T+ ILI+GL K    + AI  +++M+ K   P + ++  +   LC
Sbjct: 485 LFGRMEEEGCDQTVYTFTILIDGLFKEHKNEEAIKFWDKMIDKGITPTVASFRALAIGLC 544

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G +  A ++L                   D LA                  GI P + 
Sbjct: 545 LCGKVARACKIL-------------------DDLAPM----------------GIIP-ET 568

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
               +I   C+A +++EA  L   I  RG ++      ++I+ L K+   D+ I+++   
Sbjct: 569 AFEDMINTLCKAQRIKEACKLADGIVDRGREIPGRIRTVLINALRKAGNSDLVIKLMHSK 628

Query: 529 ISSRY 533
           I   Y
Sbjct: 629 IGIGY 633



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/323 (24%), Positives = 131/323 (40%), Gaps = 70/323 (21%)

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
           LV   L  RG+       N+L+ S G+ G  + +  +   M E    P+++TYN L+NGL
Sbjct: 169 LVFFELKDRGLLMTESAANSLIKSFGNLGLVEELLWVWRRMKENGIDPSLYTYNFLVNGL 228

Query: 373 -----------------------------------CKYGLVDRAINSFNQMVSKNCQPDI 397
                                              CK G + +A+  F  M  KN +PD 
Sbjct: 229 VNSMFIESAEKVFEVMDGGKIVPDTVTYNIMIKGYCKAGKLQKAMEKFRDMEMKNVKPDK 288

Query: 398 VTYNT-----------------------------------VLGALCKEGMLNEALQLLHL 422
           +TY T                                   V+G LCK+    EA  +   
Sbjct: 289 ITYMTLIQACYSERDFDTCLSLYLEMEERGLEIPPHSYSLVIGGLCKQRKCMEAYAVFET 348

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +N   C   +  Y  LID  +K G ME+AM L+ +M   G  PD +T+  L+ G C++ +
Sbjct: 349 MNQKGCRANVAIYTALIDSYSKNGSMEEAMRLFERMKNEGFEPDAVTYSVLVNGLCKSGR 408

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +++ ++L      +G  +    Y  +I GL K+ +++ A  + E M       D   ++ 
Sbjct: 409 LDDGMELFDFCRNKGVAINAMFYASLIDGLGKAGRIEDAENLFEEMSEKGCARDSYCYNA 468

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           I+  +A  G  ++A  L+ ++ E
Sbjct: 469 IIDALAKHGKIDQALALFGRMEE 491


>gi|356533985|ref|XP_003535538.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g16880-like, partial [Glycine max]
          Length = 594

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 125/408 (30%), Positives = 202/408 (49%), Gaps = 22/408 (5%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMSGGVP 185
           F  RG  T+  +L++ M  R  +       N +++   +  +I +AS  +  MV SG  P
Sbjct: 183 FKWRGS-TEGFRLLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSP 241

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D  TYN M+ G CK G++  A  ++DEM+  G +PD+ T NT+L T+    K ++A    
Sbjct: 242 DCFTYNTMINGFCKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELT 301

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
               ++G     +TY  LI    K     +A+++ ++M   G  P +V+YN L+   C  
Sbjct: 302 VKARKRGYILDEVTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLS 361

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDKILDIMNEA---SHSPT 361
           GK D AV  +N LL +G+ P+ ++ N ++H      CW+  VDK     N+    S  P 
Sbjct: 362 GKTDQAVDKLNELLEKGLVPDEVSCNIIIHGY----CWEGMVDKAFQFHNKMVGNSFKPD 417

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           +FT NIL+ GLC+  ++++A   FN  +SK    D+VTYNT++  LCKEG L+EA  L+ 
Sbjct: 418 IFTRNILLRGLCRVDMLEKAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMT 477

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI------------SPDDIT 469
            +      P   TYN ++  L   G  E+A     ++ E G             +  DI 
Sbjct: 478 DMEVKKFEPDQYTYNAIVRALTHAGRTEEAEKFMSKLSETGQAVKTHDTSQELDASSDIM 537

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           +   I   C   + +EA+ L +E  ++G  +    Y  ++ G  K +K
Sbjct: 538 YSQQISDLCTQGKYKEAMKLFQESEQKGVSLNKYTYIKLMDGFLKRRK 585



 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/381 (29%), Positives = 190/381 (49%), Gaps = 1/381 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D  TYN +V GLC  G+I  AI + DEM      PDV+TYNT++   F      +     
Sbjct: 136 DVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFRLL 195

Query: 246 KD-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           ++ + R G  P  +T+ I+++   K+  I  A + +  M   G SPD  TYN+++N  CK
Sbjct: 196 EEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGFCK 255

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            GK  +A  +++ +  +G++P+  T NT+LH+L      +   ++     +  +     T
Sbjct: 256 AGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDEVT 315

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y  LI G  K    D+A+  + +M  +   P +V+YN ++  LC  G  ++A+  L+ L 
Sbjct: 316 YGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNELL 375

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P  ++ N +I G   +G ++KA   + +M+ N   PD  T   L+ G CR D +E
Sbjct: 376 EKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMVGNSFKPDIFTRNILLRGLCRVDMLE 435

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +A  L      + N +    Y  +I  LCK  ++D A  ++  M   +++PD   ++ IV
Sbjct: 436 KAFKLFNSWISKQNSVDVVTYNTMISYLCKEGRLDEAFDLMTDMEVKKFEPDQYTYNAIV 495

Query: 545 KKVADDGMTEEAYKLWQKLIE 565
           + +   G TEEA K   KL E
Sbjct: 496 RALTHAGRTEEAEKFMSKLSE 516



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 82/277 (29%), Positives = 144/277 (51%), Gaps = 1/277 (0%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS-LGSRGCWDAVD 347
           S D+ TYN+LV   C +GK D+A+ V + + S  + P+ +TYNTL+      RG  +   
Sbjct: 134 SIDVWTYNTLVKGLCDEGKIDEAIRVRDEMESLKLIPDVVTYNTLIDGCFKWRGSTEGFR 193

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            + ++ +     P   T+NI++    K G ++ A ++  +MV     PD  TYNT++   
Sbjct: 194 LLEEMKSRGGVEPNAVTHNIMVKWFGKEGKINEASDAVVKMVESGVSPDCFTYNTMINGF 253

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CK G L EA +++  +      P + T NT++  L  +   E+A  L  +  + G   D+
Sbjct: 254 CKAGKLGEAFRMMDEMARKGLKPDICTLNTMLHTLCMEKKPEEAYELTVKARKRGYILDE 313

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+ TLI G+ +  Q ++A+ L +E+ KRG      +Y  +I GLC S K D A+  L  
Sbjct: 314 VTYGTLIMGYFKGKQEDKALKLWEEMKKRGIVPSVVSYNPLIRGLCLSGKTDQAVDKLNE 373

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           ++     PD+   + I+     +GM ++A++   K++
Sbjct: 374 LLEKGLVPDEVSCNIIIHGYCWEGMVDKAFQFHNKMV 410


>gi|357502217|ref|XP_003621397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355496412|gb|AES77615.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 550

 Score =  199 bits (505), Expect = 5e-48,   Method: Compositional matrix adjust.
 Identities = 119/446 (26%), Positives = 230/446 (51%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++T A  +   + +    P       LI G+    ++++A      +
Sbjct: 96  TFNILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHV 155

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   D ++Y  ++ GLCK G+ R+A+ +L ++       DV+ YN I+ ++  +   
Sbjct: 156 IALGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAV 215

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   + + + K   P ++T+  LI   C    +  A  +  +M ++  +PD+ T++ L
Sbjct: 216 SDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSIL 275

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  CK G    A  ++  ++ +G+ P+ +TY++L+         +    +   M+    
Sbjct: 276 VDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGV 335

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   +YNI+INGL K  +VD A++ F +M  K   PD VTYN+++  LCK G ++ A Q
Sbjct: 336 APHAHSYNIMINGLGKIKMVDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQ 395

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  ++ +     ++TYN+LID L K   ++KA+ L  ++ + GI P   T+  LI G C
Sbjct: 396 LVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAIALVKKIKDQGIQPSMYTYNILIDGLC 455

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +++ A D+ +++  +G  +    Y ++I+GLCK    + A  +L  M ++   PD  
Sbjct: 456 KGGRLKNAQDVFQDLLIKGYSVNAWTYNIMINGLCKEGLFNEAEVLLSKMENNGIIPDAV 515

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            + TI++ +      E+A KL +++I
Sbjct: 516 TYETIIRALFRKDENEKAEKLLREMI 541



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/417 (29%), Positives = 202/417 (48%), Gaps = 41/417 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N ++   C  GKL +A    D ++A    +    +   LI GL +I     A ++L+ 
Sbjct: 131 TFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYR-TLINGLCKIGETRAALQMLKK 189

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +       D + YN+++  LCK   +  A  L  EM      PDV+T+N+++      G+
Sbjct: 190 IEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCVVGQ 249

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            K+A G + + + K   P + T++IL++ +CK   I RA  +L  M  +G  PD+VTY+S
Sbjct: 250 LKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVTYSS 309

Query: 298 LVNFSC-----------------------------------KQGKYDDAVLVINNLLSRG 322
           L++  C                                   K    D+A+ +   +  +G
Sbjct: 310 LMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMCCKG 369

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + P+++TYN+L+  L   G      +++D M+       + TYN LI+ LCK   +D+AI
Sbjct: 370 IAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHIDKAI 429

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH--LLNGSSCSPCLITYNTLID 440
               ++  +  QP + TYN ++  LCK G L  A  +    L+ G S +    TYN +I+
Sbjct: 430 ALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAW--TYNIMIN 487

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           GL K+G   +A VL  +M  NGI PD +T+ T+I    R D+ E+A  LL+E+  RG
Sbjct: 488 GLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRG 544



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 108/359 (30%), Positives = 183/359 (50%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L   +G  V  D    N I+ + C    ++DA +L   M  +   PD     +LI G   
Sbjct: 187 LKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDVVTFNSLILGFCV 246

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           + ++++A  +   MV+    PD  T++++V  LCK G I  A  +L  M   G  PDV+T
Sbjct: 247 VGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAVMMKQGVIPDVVT 306

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y++++       +  +A   +    R G  P+  +Y I+I  + K   +  A+ +  +M 
Sbjct: 307 YSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKMVDEALSLFKEMC 366

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +G +PD VTYNSL++  CK G+   A  +++ + + G+  + +TYN+L+  L      D
Sbjct: 367 CKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNSLIDVLCKNHHID 426

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               ++  + +    P+++TYNILI+GLCK G +  A + F  ++ K    +  TYN ++
Sbjct: 427 KAIALVKKIKDQGIQPSMYTYNILIDGLCKGGRLKNAQDVFQDLLIKGYSVNAWTYNIMI 486

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
             LCKEG+ NEA  LL  +  +   P  +TY T+I  L +K   EKA  L  +M+  G+
Sbjct: 487 NGLCKEGLFNEAEVLLSKMENNGIIPDAVTYETIIRALFRKDENEKAEKLLREMIIRGL 545



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/346 (26%), Positives = 178/346 (51%), Gaps = 2/346 (0%)

Query: 220 PDVITYNTILRTMF--DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           P ++ +N IL ++   +N  +  AI        KG  P ++T+ IL+   C    +  A 
Sbjct: 55  PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +   +   G  P  +T+N+L+N  C  GK  +A+   +++++ G   + ++Y TL++ L
Sbjct: 115 SIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G   A  ++L  +     +  V  YNI+IN LCK   V  A   +++M++K   PD+
Sbjct: 175 CKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDV 234

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VT+N+++   C  G L EA  L H +   + +P + T++ L+D L K G + +A  +   
Sbjct: 235 VTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAV 294

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           MM+ G+ PD +T+ +L+ G+C  ++V +A  +   + + G      +Y ++I+GL K K 
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           VD A+ + + M      PD   +++++  +   G    A++L  ++
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEM 400



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 97/381 (25%), Positives = 188/381 (49%), Gaps = 2/381 (0%)

Query: 185 PDTITYNMMVGGLCK--RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
           P  + +N ++G + K       +AI+L  ++ + G  P ++T+N ++      G+   A 
Sbjct: 55  PSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTFNILVNCYCHLGEMTFAF 114

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +   L+ G  P  IT+  LI  +C    +  A+   D +   G   D V+Y +L+N  
Sbjct: 115 SIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIALGFHLDQVSYRTLINGL 174

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G+   A+ ++  +  + +  + + YN +++SL          ++   M     SP V
Sbjct: 175 CKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSDAYQLYSEMITKRISPDV 234

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+N LI G C  G +  A   F++MV KN  PD+ T++ ++ ALCK+G +  A  +L +
Sbjct: 235 VTFNSLILGFCVVGQLKEAFGLFHEMVLKNINPDVYTFSILVDALCKDGNITRAKNMLAV 294

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P ++TY++L+DG      + KA  ++  M   G++P   ++  +I G  +   
Sbjct: 295 MMKQGVIPDVVTYSSLMDGYCLVNEVNKAKHVFSTMSRLGVAPHAHSYNIMINGLGKIKM 354

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V+EA+ L KE+  +G       Y  +I GLCK  ++  A Q+++ M ++    D   +++
Sbjct: 355 VDEALSLFKEMCCKGIAPDTVTYNSLIDGLCKLGRISYAWQLVDEMHNNGIPADILTYNS 414

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++  +  +   ++A  L +K+
Sbjct: 415 LIDVLCKNHHIDKAIALVKKI 435



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 51/193 (26%), Positives = 100/193 (51%), Gaps = 2/193 (1%)

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCK--EGMLNEALQLLHLLNGSSCSPCLITY 435
           V+  ++SF++M+     P IV +N +LG++ K        A+ L H L     +P ++T+
Sbjct: 38  VNNDVSSFHRMLRMRPTPSIVEFNKILGSIVKANNNHYTTAISLSHQLELKGITPTIVTF 97

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           N L++     G M  A  ++ ++++ G  P  IT  TLI G C   +++EA+     +  
Sbjct: 98  NILVNCYCHLGEMTFAFSIFAKILKLGYHPTTITFNTLINGICLNGKLKEALHFHDHVIA 157

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G  +   +YR +I+GLCK  +   A+Q+L+ +       D  +++ I+  +  D    +
Sbjct: 158 LGFHLDQVSYRTLINGLCKIGETRAALQMLKKIEGKLVNTDVVMYNIIINSLCKDKAVSD 217

Query: 556 AYKLWQKLIEWKV 568
           AY+L+ ++I  ++
Sbjct: 218 AYQLYSEMITKRI 230


>gi|356557251|ref|XP_003546931.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 808

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 125/487 (25%), Positives = 226/487 (46%), Gaps = 6/487 (1%)

Query: 84  VLAVNKKLRGLTITKKS------HDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDAS 137
           V+A N  L GL  + K       +D  L + DG     D  T + +++  C+ GK+ +  
Sbjct: 162 VVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSIVVKGLCNLGKIEEGR 221

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           +L+     +  +P   F   +I G  +   ++ A++ L+ + M G +P   TY  ++ G 
Sbjct: 222 RLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKGVLPTVETYGALINGF 281

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           CK G+  +   LL EM+  G   +V  +N ++   F  G   +A    +     GC P +
Sbjct: 282 CKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAAETMRRMAEMGCGPDI 341

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            TY  +I   CK   I  A E L+     G  P+  +Y  L++  CKQG Y  A  ++  
Sbjct: 342 TTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAYCKQGDYVKAAGMLFR 401

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G +P+ ++Y   +H +   G  D    + + M E    P    YN+L++GLCK G 
Sbjct: 402 IAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVFPDAQIYNVLMSGLCKNGR 461

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
                   ++M+ +N QPD+  + T++    + G L+EA+++  ++      P ++ YN 
Sbjct: 462 FPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNA 521

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +I G  K G M  A+    +M     +PD+ T+ T+I G+ +   +  A+ +  ++ K  
Sbjct: 522 MIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHK 581

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K     Y  +I+G CK   +  A +V   M S    P+   ++T+V      G  E+A 
Sbjct: 582 FKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTYTTLVGGFFKAGKPEKAT 641

Query: 558 KLWQKLI 564
            +++ ++
Sbjct: 642 SIFELML 648



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 142/595 (23%), Positives = 263/595 (44%), Gaps = 51/595 (8%)

Query: 9   NSIIELH-CLPNLQWCSRQVSLQHGVVNNHRT----QFYSQL--RDLGAGRNV-----SL 56
           +++ E+H CLP +   +   SL +G+V + +     Q Y ++   D G G  V     S+
Sbjct: 150 HTVREMHNCLPTVVASN---SLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSI 206

Query: 57  KCRGLPGNVCIDRVNEVDQDEWSSE--SHVLAVNKKLRGL-----------TITKKSHDP 103
             +GL     I+    + +D W      HV+  N  + G            T+ +     
Sbjct: 207 VVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKG 266

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
            LP+ +         T   ++  FC  G+     +L+  MA R    +     N+I    
Sbjct: 267 VLPTVE---------TYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEF 317

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           +   + KA++ ++ M   G  PD  TYN M+   CK G+I+ A   L++    G  P+  
Sbjct: 318 KYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKF 377

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           +Y  ++      G + +A G        G  P L++Y   I  V     I  A+ V + M
Sbjct: 378 SYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKM 437

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             +G  PD   YN L++  CK G++    L+++ +L R ++P+   + TL+      G  
Sbjct: 438 MEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGEL 497

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           D   KI  ++      P +  YN +I G CK+G +  A++  N+M + +  PD  TY+TV
Sbjct: 498 DEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTV 557

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +    K+  ++ AL++   +      P +ITY +LI+G  KK  M +A  ++  M    +
Sbjct: 558 IDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDL 617

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P+ +T+ TL+ GF +A + E+A  + + +   G    ++ +  +I+GL  +    + I+
Sbjct: 618 VPNVVTYTTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIE 677

Query: 524 --------------VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                            +M+S  +      +++++  +   GM + A  L  K++
Sbjct: 678 EKDSMENERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKML 732



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 119/475 (25%), Positives = 213/475 (44%), Gaps = 43/475 (9%)

Query: 127 FCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKA----SKVLQIMVMS 181
           +   G L  A +L   +    N +P      +L+ GL++  +++ A     K+LQ    +
Sbjct: 136 YGESGSLDRALQLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGT 195

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G V D  T +++V GLC  G+I     L+ +    GC P V+ YN I+      G  + A
Sbjct: 196 GAVVDNYTTSIVVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCA 255

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCG----------------------------- 272
               K+   KG  P + TY  LI   CK                                
Sbjct: 256 TRTLKELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDA 315

Query: 273 ------IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
                 + +A E +  MA  GC PDI TYN+++NFSCK G+  +A   +     RG+ PN
Sbjct: 316 EFKYGLVTKAAETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPN 375

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
             +Y  L+H+   +G +     +L  + E    P + +Y   I+G+  +G +D A+    
Sbjct: 376 KFSYTPLMHAYCKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVRE 435

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M+ K   PD   YN ++  LCK G       LL  +   +  P +  + TL+DG  + G
Sbjct: 436 KMMEKGVFPDAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNG 495

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +++A+ ++  ++  G+ P  + +  +I GFC+  ++ +A+  L ++    +      Y 
Sbjct: 496 ELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYS 555

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK---KVADDGMTEEAYK 558
            VI G  K   +  A+++   M+  ++KP+   +++++    K AD    E+ ++
Sbjct: 556 TVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFR 610



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 98/360 (27%), Positives = 165/360 (45%), Gaps = 16/360 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +  N ++   C  G+      L+  M  RN  PD +    L+ G IR   +++A K+ 
Sbjct: 445 DAQIYNVLMSGLCKNGRFPAMKLLLSEMLDRNVQPDVYVFATLMDGFIRNGELDEAIKIF 504

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++++  G  P  + YN M+ G CK G++  A++ L++M      PD  TY+T++      
Sbjct: 505 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNKMKNVHHAPDEYTYSTVIDGYVKQ 564

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A+  +   ++    P +ITYT LI   CK+  + RA +V   M      P++VTY
Sbjct: 565 HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFRGMKSFDLVPNVVTY 624

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM-N 354
            +LV    K GK + A  +   +L  G  PN  T++ L++ L +      + +  D M N
Sbjct: 625 TTLVGGFFKAGKPEKATSIFELMLMNGCPPNDATFHYLINGLTNTATSPVLIEEKDSMEN 684

Query: 355 EASHSPTVFT-------------YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
           E S     FT             YN +I  LCK+G+VD A     +M++K    D V + 
Sbjct: 685 ERSLILDFFTMMLSEGWDQVIAAYNSVIVCLCKHGMVDTAQLLLTKMLTKGFLIDSVCFT 744

Query: 402 TVLGALCKEGMLNEALQLLHL-LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
            +L  LC +G   E   ++   LN        + Y+  +D    +G + +A V+   ++E
Sbjct: 745 AMLHGLCHKGKSKEWRNIISCDLNKIELQTA-VKYSLTLDKYLYQGRLSEASVILQTLIE 803



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 83/357 (23%), Positives = 158/357 (44%), Gaps = 5/357 (1%)

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C  D + ++++L+ +     F +     ++   +   P    ++ LI    +   + RA+
Sbjct: 87  CSLDGVAHSSLLKLLASFRVFPEIELVLENMKAQHLKPTREAFSALILAYGESGSLDRAL 146

Query: 278 EVLDDM-AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR----GMEPNSITYNT 332
           ++   +  +  C P +V  NSL+N   K GK D A+ + + +L      G   ++ T + 
Sbjct: 147 QLFHTVREMHNCLPTVVASNSLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSI 206

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           ++  L + G  +   +++         P V  YN++I+G CK G +  A  +  ++  K 
Sbjct: 207 VVKGLCNLGKIEEGRRLVKDRWGKGCVPHVVFYNMIIDGYCKKGDLQCATRTLKELKMKG 266

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             P + TY  ++   CK G      QLL  +     +  +  +N +ID   K G + KA 
Sbjct: 267 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEFKYGLVTKAA 326

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
               +M E G  PD  T+ T+I   C+  +++EA + L++  +RG      +Y  ++H  
Sbjct: 327 ETMRRMAEMGCGPDITTYNTMINFSCKGGRIKEADEFLEKAKERGLLPNKFSYTPLMHAY 386

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           CK      A  +L  +     KPD   +   +  V   G  + A  + +K++E  VF
Sbjct: 387 CKQGDYVKAAGMLFRIAEIGEKPDLVSYGAFIHGVVVHGEIDVALMVREKMMEKGVF 443


>gi|255549371|ref|XP_002515739.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223545176|gb|EEF46686.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 613

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 134/486 (27%), Positives = 234/486 (48%), Gaps = 49/486 (10%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           I  + H+P        FVE   K  + + + +       +  K+ D M       D   C
Sbjct: 134 IDNRFHEP-------KFVE---KLCDMLFRVYVDNSMFEEGFKVFDYMVHNGLKIDDRSC 183

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM--MVGGLCKRGQIRSAIALLDEM 213
           I  +  L R D++  +    + MV      D   Y+M  ++ GLCK+G++  A  L+ EM
Sbjct: 184 IVCLLALKRSDQMVMSLGFFKKMVEFK--VDVTVYSMTIVIDGLCKKGRVERAKDLMLEM 241

Query: 214 SVSGCEPDVITYNTI----------------LRTMF-------------------DNGKF 238
           +  G +P+V+TYNT+                LR M                     +GK 
Sbjct: 242 TGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKI 301

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   ++  L +G    +  +T +I   CK   + RA  + D++   G   +  TY +L
Sbjct: 302 AEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGAL 361

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++ +C  G+ D A +++N + S+G++ N + +NTL++    +G  D   ++ D+M +   
Sbjct: 362 IHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGF 421

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              +FTYN +  GLCK    + A      MV K   P+ V++  ++   CKEG L EA +
Sbjct: 422 ENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAER 481

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +      P ++TYNTLIDG +KKG +++A  L  +M   G++ D  T+ TL+ G C
Sbjct: 482 VFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVHGEC 541

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              +VEEA+ LL E+ ++G  +    Y  +I GL K  + + A ++ + M+++   PDD 
Sbjct: 542 VFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDR 601

Query: 539 VFSTIV 544
           V++++V
Sbjct: 602 VYTSLV 607



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 82/322 (25%), Positives = 155/322 (48%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ + S GK+ +A K+ + M  R    D H   ++I    ++  +++A  +   +   G
Sbjct: 291 LIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFTSIISWQCKLGNMKRAFALFDELNERG 350

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V +  TY  ++ G C  GQ+ +A  L++EM   G + +++ +NT++      G   +A+
Sbjct: 351 LVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEAL 410

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                  +KG    + TY  +   +CK      A   L  M  +G  P+ V++  +++  
Sbjct: 411 RMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIH 470

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK+G   +A  V  ++  +G +PN +TYNTL+     +G      ++ D M     +  +
Sbjct: 471 CKEGNLVEAERVFQDMKKKGEKPNVVTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDI 530

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TY  L++G C +G V+ A+   N++  K     IVTY  ++  L KEG   EA +L   
Sbjct: 531 YTYTTLVHGECVFGKVEEALTLLNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDE 590

Query: 423 LNGSSCSPCLITYNTLIDGLAK 444
           +  +  +P    Y +L+  L K
Sbjct: 591 MMAAGLTPDDRVYTSLVANLHK 612



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 148/300 (49%), Gaps = 6/300 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D      I+   C  G +  A  L D +  R  + + H    LI G     +++ A 
Sbjct: 316 VEADIHVFTSIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAE 375

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M   G   + + +N ++ G CK+G I  A+ + D M   G E D+ TYNTI   +
Sbjct: 376 MLVNEMQSQGLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGL 435

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               + ++A  +    + KG  P  +++TI+I+  CK+  +  A  V  DM  +G  P++
Sbjct: 436 CKLNRHEEAKRWLFTMVEKGVDPNAVSFTIMIDIHCKEGNLVEAERVFQDMKKKGEKPNV 495

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L++   K+GK  +A  + + + S GM  +  TY TL+H       +  V++ L +
Sbjct: 496 VTYNTLIDGYSKKGKLKEAYRLKDEMESIGMTSDIYTYTTLVH---GECVFGKVEEALTL 552

Query: 353 MNEASH---SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           +NE      + ++ TY  +I+GL K G  + A   +++M++    PD   Y +++  L K
Sbjct: 553 LNEVCRKGLAISIVTYTAIISGLSKEGRSEEAFRLYDEMMAAGLTPDDRVYTSLVANLHK 612



 Score = 83.2 bits (204), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 65/249 (26%), Positives = 118/249 (47%), Gaps = 37/249 (14%)

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK--- 409
           M E     TV++  I+I+GLCK G V+RA +   +M  K  +P++VTYNT++ A  K   
Sbjct: 206 MVEFKVDVTVYSMTIVIDGLCKKGRVERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMD 265

Query: 410 -EGMLNEALQLLHL---LNGSSCSPCLI-----------------------------TYN 436
            EG +NE L+L+ +   +  ++    LI                              + 
Sbjct: 266 FEG-VNEMLRLMEMDKVVYNAATYTLLIEWYGSSGKIAEAEKVFEKMLERGVEADIHVFT 324

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           ++I    K G M++A  L+ ++ E G+  +  T+  LI G C + Q++ A  L+ E+  +
Sbjct: 325 SIISWQCKLGNMKRAFALFDELNERGLVANAHTYGALIHGTCNSGQLDAAEMLVNEMQSQ 384

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G  M    +  +I+G CK   +D A+++ ++M    ++ D   ++TI   +      EEA
Sbjct: 385 GLDMNLVIFNTLINGYCKKGMIDEALRMQDVMEKKGFENDIFTYNTIAGGLCKLNRHEEA 444

Query: 557 YKLWQKLIE 565
            +    ++E
Sbjct: 445 KRWLFTMVE 453



 Score = 42.0 bits (97), Expect = 0.83,   Method: Compositional matrix adjust.
 Identities = 31/146 (21%), Positives = 66/146 (45%), Gaps = 7/146 (4%)

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++  SC  CL+        L +   M  ++  + +M+E  +     +   +I G C+  +
Sbjct: 178 IDDRSCIVCLL-------ALKRSDQMVMSLGFFKKMVEFKVDVTVYSMTIVIDGLCKKGR 230

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VE A DL+ E+  +G K     Y  +++   K    +   ++L LM   +   +   ++ 
Sbjct: 231 VERAKDLMLEMTGKGIKPNVVTYNTLVNAYIKIMDFEGVNEMLRLMEMDKVVYNAATYTL 290

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           +++     G   EA K+++K++E  V
Sbjct: 291 LIEWYGSSGKIAEAEKVFEKMLERGV 316


>gi|299471045|emb|CBN78905.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 755

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 119/430 (27%), Positives = 217/430 (50%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A  L+  MA R  +PD     + I+   R  + E+   +L+ M   G  PD ITYN ++ 
Sbjct: 199 AVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVIT 258

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
           G  K GQ + A+++L EMS  G  P+ I+YN  +R    +G++K+A+   +    +G  P
Sbjct: 259 GCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTP 318

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            +I+Y   I+          ++++LD+MA  G +P+ + +NS +    K G+++ AV ++
Sbjct: 319 DVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELL 378

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
             + + G+ P++ ++N+ + +    G W    ++L  M      P   +YN  I    K 
Sbjct: 379 REVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKG 438

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G  + A+    QM +K   P++++ N  + A  + G   E L+LL  +     +P +ITY
Sbjct: 439 GQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITY 498

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           N+ I    K G  EKA+ L  +M E  ++PD IT+ + I    +  + +EAV LL+E+  
Sbjct: 499 NSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPG 558

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           +G      +Y   I    K+ + + A+++L  M +    P+   +++++K     G  E+
Sbjct: 559 QGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEK 618

Query: 556 AYKLWQKLIE 565
           A  L ++L E
Sbjct: 619 ALDLLKELKE 628



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 215/444 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++      G+  +A  ++  M+ +   P+       IR   R  R ++A +VL
Sbjct: 249 DAITYNSVITGCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVL 308

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD I+Y+  +      GQ  +++ LLDEM+  G  P+ I +N+ +      
Sbjct: 309 RQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKG 368

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G++++A+   ++    G  P   ++   I    K      A+E+L +M  +   PD ++Y
Sbjct: 369 GQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISY 428

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           NS +    K G+++ A+ +   + ++G+ PN I+ N  + + G RG W    ++L  M  
Sbjct: 429 NSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPA 488

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P V TYN  I    K G  ++A++   +M      PD +TYN+ + A  K G   E
Sbjct: 489 QGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKE 548

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ LL  + G   +P +I+Y   ID   K G  E+A+ L  QM   G++P+ IT+ ++I 
Sbjct: 549 AVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIK 608

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
              R  + E+A+DLLKE+ +        +Y L I    K  + + A+ +L  M +    P
Sbjct: 609 ACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTP 668

Query: 536 DDTVFSTIVKKVADDGMTEEAYKL 559
           D   +++ ++    +G  E+A  L
Sbjct: 669 DVISYTSAIRACNAEGEWEKALGL 692



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 117/421 (27%), Positives = 209/421 (49%), Gaps = 2/421 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
           G+   +  L+D MA R   P+  HF   ++    +  + EKA ++L+ +   G  PD  +
Sbjct: 334 GQWETSVDLLDEMAGRGVAPNTIHFNSAIV-ACGKGGQWEKAVELLREVTALGLTPDATS 392

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           +N  +    K G+ + A+ LL EM     +PD I+YN+ +      G+++ A+   +   
Sbjct: 393 FNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMP 452

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            KG  P +I+  I I    ++      +E+L  M  +G +P+++TYNS +    K G+++
Sbjct: 453 TKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWE 512

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A+ ++  +    M P+SITYN+ + +   RG W     +L  M     +P V +Y   I
Sbjct: 513 KALDLLAKMKELAMTPDSITYNSAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAI 572

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +   K G  +RA+    QM +K   P+++TYN+V+ A  + G   +AL LL  L  ++ +
Sbjct: 573 DAYGKNGQWERAVELLRQMPTKGLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVA 632

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P L++YN  I    K+G  E+A+ L  +M   G++PD I++ + I       + E+A+ L
Sbjct: 633 PDLMSYNLAISACGKRGRWEEALDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGL 692

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L  +G  G     ++Y L I    K  + + A+ ++  M        +   S IV+ + D
Sbjct: 693 LNLMGAHGVSPTATSYSLAIEACGKGGRREEAVCLVREMAQRGLSHRNISNSLIVEALGD 752

Query: 550 D 550
           D
Sbjct: 753 D 753



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/430 (26%), Positives = 204/430 (47%), Gaps = 1/430 (0%)

Query: 128 CSR-GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           C R G+  +A +++  M  +   PD       I+      + E +  +L  M   G  P+
Sbjct: 295 CGRSGRWKEAVEVLRQMESQGVTPDVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPN 354

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           TI +N  +    K GQ   A+ LL E++  G  PD  ++N+ +     +G++K+A+   K
Sbjct: 355 TIHFNSAIVACGKGGQWEKAVELLREVTALGLTPDATSFNSAIAACTKSGRWKEALELLK 414

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           +   K   P  I+Y   IE   K      A+E+   M  +G +P++++ N  +    ++G
Sbjct: 415 EMPAKRLKPDAISYNSAIEACGKGGQWEMALELRRQMPTKGLTPNVISSNIAIRACGERG 474

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           ++ + + ++  + ++G+ PN ITYN+ + + G  G W+    +L  M E + +P   TYN
Sbjct: 475 RWQEGLELLRQMPAQGLTPNVITYNSAIKTCGKGGQWEKALDLLAKMKELAMTPDSITYN 534

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
             I    K G    A+    +M  +   PD+++Y   + A  K G    A++LL  +   
Sbjct: 535 SAIAACSKRGRWKEAVALLREMPGQGLTPDVISYTAAIDAYGKNGQWERAVELLRQMPTK 594

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
             +P +ITYN++I    + G  EKA+ L  ++ E  ++PD +++   I    +  + EEA
Sbjct: 595 GLTPNVITYNSVIKACGRGGEWEKALDLLKELKETAVAPDLMSYNLAISACGKRGRWEEA 654

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           +DLL+E+   G      +Y   I       + + A+ +L LM +    P  T +S  ++ 
Sbjct: 655 LDLLREMPAEGLTPDVISYTSAIRACNAEGEWEKALGLLNLMGAHGVSPTATSYSLAIEA 714

Query: 547 VADDGMTEEA 556
               G  EEA
Sbjct: 715 CGKGGRREEA 724



 Score =  142 bits (359), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 87/385 (22%), Positives = 181/385 (47%), Gaps = 1/385 (0%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQ 240
           GGV    +Y   +    ++GQ   A+ LL E+    G  P+V  YN+ +       +++ 
Sbjct: 139 GGVVCAHSYTTAITTCGRQGQWEKALELLREIPEQEGVSPNVFCYNSAIEACGSGDQWEI 198

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   ++   +   P  I+Y   I+   +     R I +L +M   G +PD +TYNS++ 
Sbjct: 199 AVSLLREMADREVVPDEISYNSAIKACGRGGQWERVIGLLREMPSVGLTPDAITYNSVIT 258

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K+G++ +A+ V+  + ++G+ P +I+YN  + + G  G W    ++L  M     +P
Sbjct: 259 GCGKEGQWKEALSVLTEMSAKGLTPETISYNMAIRACGRSGRWKEAVEVLRQMESQGVTP 318

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V +Y+  I      G  + +++  ++M  +   P+ + +N+ + A  K G   +A++LL
Sbjct: 319 DVISYDAAIKACGGGGQWETSVDLLDEMAGRGVAPNTIHFNSAIVACGKGGQWEKAVELL 378

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +     +P   ++N+ I    K G  ++A+ L  +M    + PD I++ + I    + 
Sbjct: 379 REVTALGLTPDATSFNSAIAACTKSGRWKEALELLKEMPAKRLKPDAISYNSAIEACGKG 438

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            Q E A++L +++  +G      +  + I    +  +    +++L  M +    P+   +
Sbjct: 439 GQWEMALELRRQMPTKGLTPNVISSNIAIRACGERGRWQEGLELLRQMPAQGLTPNVITY 498

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           ++ +K     G  E+A  L  K+ E
Sbjct: 499 NSAIKTCGKGGQWEKALDLLAKMKE 523


>gi|297833514|ref|XP_002884639.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297330479|gb|EFH60898.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 864

 Score =  198 bits (504), Expect = 6e-48,   Method: Compositional matrix adjust.
 Identities = 139/534 (26%), Positives = 239/534 (44%), Gaps = 84/534 (15%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRIDRIEKASKV 174
           D      +L  FC    L DA K+ D+M+R     P+      LI GL  + R+E+A  +
Sbjct: 229 DSHIVTSLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGL 288

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              M   G  P T TY +++  LC RG I  A  L DEM   GC+P+V TY  ++  +  
Sbjct: 289 KDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCR 348

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           +GK ++A G  +  ++ G  P +ITY  LI   CK   +  A E+L  M    C P++ T
Sbjct: 349 DGKIEEANGVCRKMVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRT 408

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           +N L+   C+ GK   AV ++  +L  G+ P+ ++YN L+  L   G  +   K+L  MN
Sbjct: 409 FNELMEGLCRVGKPYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMN 468

Query: 355 EASHSPTVFTYNILINGLCKYGLVD----------------------------------- 379
                P   T+  +IN  CK G  D                                   
Sbjct: 469 SFDLEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTR 528

Query: 380 ------------------RAINSFNQMVSKNCQ-----------------PDIVTYNTVL 404
                              ++N    M+SK C+                 P +VTY T++
Sbjct: 529 DALFILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLV 588

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             L + G ++ + ++L L+  S C P +  Y  +I+GL + G +E+A  L   M ++G+S
Sbjct: 589 DGLIRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVS 648

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK------- 517
           P+ +T+  ++ G+    +++ A++ ++ + +RG ++ +  Y  ++ G   S+K       
Sbjct: 649 PNHVTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDP 708

Query: 518 --VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             +   I V+E +  S       +F  +V ++  +G T+E+  L Q +++  VF
Sbjct: 709 ECIKELISVVEQLGGS--TSGLCIF--LVTRLCKEGRTDESNGLVQTILKSGVF 758



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 220/444 (49%), Gaps = 38/444 (8%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
            ++  L +    E A   +  ++  G + D+     ++ G C+   +R A+ + D MS  
Sbjct: 200 TIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLNLRDALKVFDLMSRE 259

Query: 217 G-CEPDVITYNTILRTMFDNGKFKQAIGFWKDQL-RKGCPPYLITYTILIEQVCKQCGIA 274
           G C P+ ++Y+ ++  + + G+ ++A G  KDQ+  KGC P   TYT+LI+ +C +  I 
Sbjct: 260 GTCAPNSVSYSILIHGLCEVGRLEEAFGL-KDQMGEKGCQPSTRTYTVLIKALCDRGLID 318

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
           +A  + D+M   GC P++ TY  L++  C+ GK ++A  V   ++  G+ P+ ITYN L+
Sbjct: 319 KAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKDGIFPSVITYNALI 378

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           +     G      ++L +M + +  P V T+N L+ GLC+ G   +A++   +M+     
Sbjct: 379 NGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKAVHLLKRMLDNGLS 438

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PDIV+YN ++  LC+EG +N A +LL  +N     P  +T+  +I+   K+G  + A   
Sbjct: 439 PDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINAFCKQGKADVASAF 498

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK------------------R 496
            G M+  GIS D++T  TLI G C   +  +A+ +L+ + K                  +
Sbjct: 499 LGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRMLTTPHSLNVILDMLSK 558

Query: 497 GNKMRNS-----------------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           G K++                    Y  ++ GL +S  +  + ++LELM  S   P+   
Sbjct: 559 GCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSFRMLELMKLSGCLPNVYP 618

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           ++ I+  +   G  EEA KL   +
Sbjct: 619 YTIIINGLCQFGRVEEAEKLLSAM 642



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/358 (29%), Positives = 184/358 (51%), Gaps = 1/358 (0%)

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           M   G    +I Y TI+  +  NG  + A  F    L+ G        T L+   C+   
Sbjct: 186 MEADGFVVGMIDYRTIVNALCKNGYTEAAEMFMCKILKVGFLLDSHIVTSLLLGFCRGLN 245

Query: 273 IARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
           +  A++V D M+ EG C+P+ V+Y+ L++  C+ G+ ++A  + + +  +G +P++ TY 
Sbjct: 246 LRDALKVFDLMSREGTCAPNSVSYSILIHGLCEVGRLEEAFGLKDQMGEKGCQPSTRTYT 305

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            L+ +L  RG  D    + D M      P V TY +LI+GLC+ G ++ A     +MV  
Sbjct: 306 VLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRKMVKD 365

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              P ++TYN ++   CK+G +  A +LL ++   +C P + T+N L++GL + G   KA
Sbjct: 366 GIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGKPYKA 425

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           + L  +M++NG+SPD +++  LI G CR   +  A  LL  +     +     +  +I+ 
Sbjct: 426 VHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTAIINA 485

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            CK  K D+A   L LM+      D+   +T++  V + G T +A  + + L++ ++ 
Sbjct: 486 FCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMRML 543



 Score =  144 bits (364), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 126/529 (23%), Positives = 218/529 (41%), Gaps = 120/529 (22%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T   +++  C RG +  A  L D M  R   P+ H    LI GL R  +IE+A+ V + 
Sbjct: 302 RTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTYTVLIDGLCRDGKIEEANGVCRK 361

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV  G  P  ITYN ++ G CK G++  A  LL  M    C+P+V T+N ++  +   GK
Sbjct: 362 MVKDGIFPSVITYNALINGYCKDGRVVPAFELLTVMEKRACKPNVRTFNELMEGLCRVGK 421

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+   K  L  G  P +++Y +LI+ +C++  +  A ++L  M      PD +T+ +
Sbjct: 422 PYKAVHLLKRMLDNGLSPDIVSYNVLIDGLCREGHMNVAYKLLTSMNSFDLEPDCLTFTA 481

Query: 298 LVNFSCKQ-----------------------------------GKYDDAVLVINNL---- 318
           ++N  CKQ                                   GK  DA+ ++  L    
Sbjct: 482 IINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDALFILETLVKMR 541

Query: 319 --------------LSRG-----------------MEPNSITYNTLLHSLGSRGCWDAVD 347
                         LS+G                 + P+ +TY TL+  L   G      
Sbjct: 542 MLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGLIRSGDISGSF 601

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++L++M  +   P V+ Y I+INGLC++G V+ A    + M      P+ VTY  ++   
Sbjct: 602 RMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNHVTYTVMVKGY 661

Query: 408 CKEGMLNEALQ--------------------------------------------LLHLL 423
              G L+ AL+                                            ++  L
Sbjct: 662 VNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECIKELISVVEQL 721

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
            GS+   C+     L+  L K+G  +++  L   ++++G+  +      ++  +C   + 
Sbjct: 722 GGSTSGLCIF----LVTRLCKEGRTDESNGLVQTILKSGVFLEKAID-IIMESYCSKKKH 776

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ-VLELMISS 531
            + V+L+  + K G      ++ LVI GL K    + A + V+EL+ S+
Sbjct: 777 TKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSN 825



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 88/361 (24%), Positives = 167/361 (46%), Gaps = 15/361 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T   I+  FC +GK   AS  + +M R+    D      LI G+  + +   A 
Sbjct: 472 LEPDCLTFTAIINAFCKQGKADVASAFLGLMLRKGISLDEVTGTTLIDGVCNVGKTRDAL 531

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ +V    +    + N+++  L K  +++  +A+L +++  G  P V+TY T++  +
Sbjct: 532 FILETLVKMRMLTTPHSLNVILDMLSKGCKLKEELAMLGKINKLGLVPSVVTYTTLVDGL 591

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G    +    +     GC P +  YTI+I  +C+   +  A ++L  M   G SP+ 
Sbjct: 592 IRSGDISGSFRMLELMKLSGCLPNVYPYTIIINGLCQFGRVEEAEKLLSAMQDSGVSPNH 651

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS--LGSRG-------CW 343
           VTY  +V      GK D A+  +  ++ RG E N   Y++LL    L  +G       C 
Sbjct: 652 VTYTVMVKGYVNNGKLDRALETVRAMVERGYELNDRIYSSLLRGFVLSQKGIRETDPECI 711

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             +  +++ +  ++    +F    L+  LCK G  D + N   Q + K+        + +
Sbjct: 712 KELISVVEQLGGSTSGLCIF----LVTRLCKEGRTDES-NGLVQTILKSGVFLEKAIDII 766

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM-ENG 462
           + + C +    + ++L+ L+  S   P   ++  +I GL K+G  E+A  L  +++  NG
Sbjct: 767 MESYCSKKKHTKCVELITLVLKSGFVPSFKSFCLVIQGLKKEGDTERARELVMELLTSNG 826

Query: 463 I 463
           +
Sbjct: 827 V 827



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 103/209 (49%), Gaps = 7/209 (3%)

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH--- 421
           Y+ L+  L K  L   A  ++ +M +      ++ Y T++ ALCK G   EA ++     
Sbjct: 163 YSSLLMSLAKLDLGFLAYVTYRRMEADGFVVGMIDYRTIVNALCKNGY-TEAAEMFMCKI 221

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI-SPDDITHRTLIWGFCRA 480
           L  G      ++T  +L+ G  +   +  A+ ++  M   G  +P+ +++  LI G C  
Sbjct: 222 LKVGFLLDSHIVT--SLLLGFCRGLNLRDALKVFDLMSREGTCAPNSVSYSILIHGLCEV 279

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++EEA  L  ++G++G +     Y ++I  LC    +D A  + + MI+   KP+   +
Sbjct: 280 GRLEEAFGLKDQMGEKGCQPSTRTYTVLIKALCDRGLIDKAFNLFDEMIARGCKPNVHTY 339

Query: 541 STIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           + ++  +  DG  EEA  + +K+++  +F
Sbjct: 340 TVLIDGLCRDGKIEEANGVCRKMVKDGIF 368



 Score = 39.3 bits (90), Expect = 5.6,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 53/98 (54%), Gaps = 2/98 (2%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH-FCINLIRGLIRIDRIEKASKVL 175
           EK  + I++++CS+ K T   +LI ++ +   +P F  FC+ +I+GL +    E+A +++
Sbjct: 760 EKAIDIIMESYCSKKKHTKCVELITLVLKSGFVPSFKSFCL-VIQGLKKEGDTERARELV 818

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
             ++ S GV +       V  L + G     I L+D++
Sbjct: 819 MELLTSNGVVEKSGVLPYVECLMETGDCSEVIDLVDQL 856


>gi|242058007|ref|XP_002458149.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
 gi|241930124|gb|EES03269.1| hypothetical protein SORBIDRAFT_03g027690 [Sorghum bicolor]
          Length = 795

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 142/541 (26%), Positives = 245/541 (45%), Gaps = 15/541 (2%)

Query: 48  LGAGRNVSLKCRGLPGNVCID---RVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPS 104
           LG  R   LK R    N  +D   +V  +D+     +  +LA  KK+     T       
Sbjct: 246 LGKMREAGLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYC 305

Query: 105 LPSSDGPFVE-NDEKTNN---------KILQNFCSRGKLTDAS-KLIDIMARRNQIPDFH 153
           L    G  ++  DE   +          +L   C    +TD + KL   M  +  +P  +
Sbjct: 306 LHGEIGKALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTY 365

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
               +I+GL+R  + E A  +  ++V   GVPD  TY  ++  L K  ++  A+ L D+M
Sbjct: 366 EFNLVIKGLLRNKQWEDAIALFDLVV-DTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKM 424

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
             +G +P ++T +++L    + G   +A+  + +   KG PP  +TYT L++   K+   
Sbjct: 425 KEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAF 484

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            +A  +L++M   G S    TYN L+N  C   +  +   ++   +S G  P ++TYN++
Sbjct: 485 DKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSI 544

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           ++     G   +   +   M E   +P + TY   I+G C+    D A+     M     
Sbjct: 545 INGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGI 604

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PDI  YN  +   CK+G ++ AL  L LL     +P +  YN+ + G      M +A  
Sbjct: 605 HPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASK 664

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
            Y  M++  I+ D   + TLI GF +   V  A++L  E+    N   +  +  + HGLC
Sbjct: 665 FYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLC 724

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
           +S  +D A ++L+ M      P+   ++ ++     DG  +EA++L  K++   V    T
Sbjct: 725 RSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDT 784

Query: 574 T 574
           T
Sbjct: 785 T 785



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 225/482 (46%), Gaps = 36/482 (7%)

Query: 123 ILQNFCSRGKLT-DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           ++   C  G++  DA +L D MA     PD       I GL ++   ++A +VL  M  +
Sbjct: 193 VVMRACVVGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREA 252

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQ 240
           G  P   TYN +V  L K G++  A+ L D+M ++ G + DV    T+++    +G+  +
Sbjct: 253 GLKPRDFTYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGK 312

Query: 241 AIGFWKDQLRKGCPPYLITYTILIE------------QVCKQC----------------- 271
           A+  + + +R G  P  +TYT+LI+            ++C+Q                  
Sbjct: 313 ALDLFDEAVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIK 372

Query: 272 GIARAIE-----VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           G+ R  +      L D+ ++   PD+ TY  L+++  K  K  +AV + + +   G++P+
Sbjct: 373 GLLRNKQWEDAIALFDLVVDTGVPDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPS 432

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
            +T ++LL     +GC D   K+   M      P   TY  L+ G  K    D+A    N
Sbjct: 433 IVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLN 492

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M          TYN ++  LC    + E  ++L         P  +TYN++I+G  K G
Sbjct: 493 EMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAG 552

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            M  A+ +Y QM E GI+P+ +T+ + I G+CR +  + AV LL  +   G     +AY 
Sbjct: 553 MMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYMRCNGIHPDIAAYN 612

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
             I+  CK   +  A+  L L++     P+ TV+++ V    +  M  EA K +  +I+ 
Sbjct: 613 AFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQ 672

Query: 567 KV 568
           ++
Sbjct: 673 RI 674



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 203/428 (47%), Gaps = 10/428 (2%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M  R  +PD     +L+    R      A  +   M   G   D   Y++++   C  G+
Sbjct: 144 MVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRA-CVVGR 202

Query: 203 IRS-AIALLDEMSVSGCEPDVITYN---TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           +   A+ L DEM+ +G +PD   Y    T L  + D  +  Q +G  ++    G  P   
Sbjct: 203 MHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREA---GLKPRDF 259

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           TY  +++ + K   +  A+ + D M +  G   D+    +L+   C  G+   A+ + + 
Sbjct: 260 TYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDE 319

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
            +  G+ P ++TY  L+    + G  D   K+   M E    P+ + +N++I GL +   
Sbjct: 320 AVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQ 379

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
            + AI  F+ +V     PD+ TY  ++  L K   ++EA+ L   +  +   P ++T ++
Sbjct: 380 WEDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHS 438

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           L+ G  +KGCM++A+ LY +M   G  P+++T+ TL+ G+ +    ++A  LL E+ + G
Sbjct: 439 LLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYTTLMKGYIKKKAFDKAYALLNEMHQNG 498

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  Y ++I+GLC   +V    ++L+  +S  + P    +++I+      GM   A 
Sbjct: 499 VSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSEGFVPTTMTYNSIINGFVKAGMMGSAL 558

Query: 558 KLWQKLIE 565
            +++++ E
Sbjct: 559 AMYRQMCE 566



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 100/410 (24%), Positives = 174/410 (42%), Gaps = 35/410 (8%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           K+ +A  L D M      P    C +L+ G      +++A K+   M   G  P+ +TY 
Sbjct: 413 KVHEAVNLWDKMKEAGVKPSIVTCHSLLLGYCEKGCMDEALKLYSEMPGKGFPPNEVTYT 472

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            ++ G  K+     A ALL+EM  +G      TYN ++  +    +  +     K  + +
Sbjct: 473 TLMKGYIKKKAFDKAYALLNEMHQNGVSCGEYTYNILINGLCMVDRVCEVDEMLKRFVSE 532

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P  +TY  +I    K   +  A+ +   M  +G +P+IVTY S ++  C+    D A
Sbjct: 533 GFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLA 592

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           V ++  +   G+ P+                                   +  YN  IN 
Sbjct: 593 VKLLIYMRCNGIHPD-----------------------------------IAAYNAFINM 617

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
            CK G +  A++    ++     P++  YN+ +       M+ EA +  + +     +  
Sbjct: 618 FCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRIAAD 677

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
              Y TLIDG +K G +  A+ LY +M+ N   PDD T   L  G CR+  ++ A  LL 
Sbjct: 678 TEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGLCRSGDIDGAKRLLD 737

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ +         Y ++I+   +  K+  A Q+ + M+SS   PDDT ++
Sbjct: 738 DMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDDTTYN 787



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 81/323 (25%), Positives = 135/323 (41%), Gaps = 39/323 (12%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKV 174
           +E T   +++ +  +     A  L++ M  +N +    +  N LI GL  +DR+ +  ++
Sbjct: 467 NEVTYTTLMKGYIKKKAFDKAYALLNEM-HQNGVSCGEYTYNILINGLCMVDRVCEVDEM 525

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L+  V  G VP T+TYN ++ G  K G + SA+A+  +M   G  P+++TY + +     
Sbjct: 526 LKRFVSEGFVPTTMTYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCR 585

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
                 A+         G  P +  Y   I   CKQ  ++ A+  L  +  +G +P++  
Sbjct: 586 TNCCDLAVKLLIYMRCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTV 645

Query: 295 YNSLVN------------------------------------FSCKQGKYDDAVLVINNL 318
           YNS V                                     FS K G    A+ + + +
Sbjct: 646 YNSFVTGYKNLKMMAEASKFYYSMIKQRIAADTEIYTTLIDGFS-KVGNVAFALELYSEM 704

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           L+    P+  T+  L H L   G  D   ++LD M      P   TYN+LIN   + G +
Sbjct: 705 LANHNIPDDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKL 764

Query: 379 DRAINSFNQMVSKNCQPDIVTYN 401
             A    ++M+S    PD  TYN
Sbjct: 765 QEAFQLHDKMLSSGVVPDDTTYN 787



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 139/290 (47%), Gaps = 8/290 (2%)

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS-LGSRG 341
           M   G  PD  +   L+  + +     DA+ + + +  +G   ++  Y+ ++ + +  R 
Sbjct: 144 MVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYDVVMRACVVGRM 203

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             DAV ++ D M  A   P    Y I I GLCK    DRA+    +M     +P   TYN
Sbjct: 204 HGDAV-RLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDFTYN 262

Query: 402 TVLGALCKEGMLNEALQL---LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           +V+  L K G ++EAL+L   + L  G      L T  TL+ G    G + KA+ L+ + 
Sbjct: 263 SVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLAT--TLMQGYCLHGEIGKALDLFDEA 320

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           + +G++P ++T+  LI G       +E   L +++ ++G       + LVI GL ++K+ 
Sbjct: 321 VRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQW 380

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + AI + +L++ +   PD   +  ++  ++      EA  LW K+ E  V
Sbjct: 381 EDAIALFDLVVDTGV-PDVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGV 429



 Score =  102 bits (254), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 82/321 (25%), Positives = 144/321 (44%), Gaps = 4/321 (1%)

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           +   + +G  P   + T L+    +    A A+ + D+M  +G   D   Y+ +V  +C 
Sbjct: 141 YSRMVTRGVVPDAKSRTDLLVATARGASAADALTLFDEMRCKGYYADAKMYD-VVMRACV 199

Query: 305 QGK-YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
            G+ + DAV + + +   G++P+   Y   +  L      D   ++L  M EA   P  F
Sbjct: 200 VGRMHGDAVRLFDEMAGAGVKPDERVYAITITGLCKLRDADRAVQVLGKMREAGLKPRDF 259

Query: 364 TYNILINGLCKYGLVDRAINSFNQM-VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           TYN +++ L K G +D A+   +QM ++   + D+    T++   C  G + +AL L   
Sbjct: 260 TYNSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVFLATTLMQGYCLHGEIGKALDLFDE 319

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
                 +P  +TY  LI G   +G  ++   L  QM+E G+ P       +I G  R  Q
Sbjct: 320 AVRDGVTPTNVTYTVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRNKQ 379

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
            E+A+ L   +   G       Y  +IH L K  KV  A+ + + M  +  KP      +
Sbjct: 380 WEDAIALFDLVVDTGVP-DVFTYGCLIHWLSKHHKVHEAVNLWDKMKEAGVKPSIVTCHS 438

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++    + G  +EA KL+ ++
Sbjct: 439 LLLGYCEKGCMDEALKLYSEM 459



 Score = 89.0 bits (219), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 63/250 (25%), Positives = 110/250 (44%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+  F   G +  A  +   M  +   P+     + I G  R +  + A K+L  M
Sbjct: 540 TYNSIINGFVKAGMMGSALAMYRQMCEKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYM 599

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  PD   YN  +   CK+G +  A+  L  +   G  P+V  YN+ +    +    
Sbjct: 600 RCNGIHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMM 659

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A  F+   +++        YT LI+   K   +A A+E+  +M      PD  T+ +L
Sbjct: 660 AEASKFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTAL 719

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            +  C+ G  D A  +++++    + PN++TYN L+++    G      ++ D M  +  
Sbjct: 720 THGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGV 779

Query: 359 SPTVFTYNIL 368
            P   TYNI 
Sbjct: 780 VPDDTTYNIF 789



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 43/184 (23%), Positives = 74/184 (40%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D    N  +  FC +G ++ A   + ++ +    P+     + + G   +  + +AS
Sbjct: 604 IHPDIAAYNAFINMFCKQGNMSHALHFLVLLLKDGLTPNVTVYNSFVTGYKNLKMMAEAS 663

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K    M+      DT  Y  ++ G  K G +  A+ L  EM  +   PD  T+  +   +
Sbjct: 664 KFYYSMIKQRIAADTEIYTTLIDGFSKVGNVAFALELYSEMLANHNIPDDKTFTALTHGL 723

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G    A     D  R    P  +TY +LI    +   +  A ++ D M   G  PD 
Sbjct: 724 CRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLHDKMLSSGVVPDD 783

Query: 293 VTYN 296
            TYN
Sbjct: 784 TTYN 787



 Score = 44.3 bits (103), Expect = 0.17,   Method: Compositional matrix adjust.
 Identities = 25/78 (32%), Positives = 40/78 (51%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+KT   +    C  G +  A +L+D M R +  P+      LI   IR  ++++A ++ 
Sbjct: 712 DDKTFTALTHGLCRSGDIDGAKRLLDDMTRLDVCPNTVTYNMLINAHIRDGKLQEAFQLH 771

Query: 176 QIMVMSGGVPDTITYNMM 193
             M+ SG VPD  TYN+ 
Sbjct: 772 DKMLSSGVVPDDTTYNIF 789


>gi|242069107|ref|XP_002449830.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
 gi|241935673|gb|EES08818.1| hypothetical protein SORBIDRAFT_05g024080 [Sorghum bicolor]
          Length = 676

 Score =  198 bits (503), Expect = 7e-48,   Method: Compositional matrix adjust.
 Identities = 128/491 (26%), Positives = 216/491 (43%), Gaps = 39/491 (7%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG  V  D ++   ++   C  G+  +A  L+  M R     D   C  ++R   R  R 
Sbjct: 173 DGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRF 232

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
                +   MV  G  P+ + Y   V GLCKRG ++ A  +L+EM   G +P+V T+ ++
Sbjct: 233 RDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSL 292

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           +  +   G  ++A   +   ++     P + TYT++I   CK+  +ARA  +L  M  +G
Sbjct: 293 IDGLCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQG 352

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
            +P+  TY +L++  C+ G +D A  ++N +   G  PN  TYN ++     +G      
Sbjct: 353 LAPNTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAY 412

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV---- 403
           K+L +       P   TY +LI   CK G +  A++ FNQM   +C PDI TY T+    
Sbjct: 413 KVLRMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMY 472

Query: 404 -------------------------------LGALCKEGMLNEALQLLHLLNGSSCSPCL 432
                                          +   C+ G    AL++   +    C P  
Sbjct: 473 CQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDP 532

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           ITY  LI GL K+  +E+A  L+  M++  + P D+T  TL + +CR D+   AV  L  
Sbjct: 533 ITYGALISGLCKESRLEEARALFETMLDKHMVPCDVTCVTLAYEYCRRDKTTIAVSFLDG 592

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + KR       A   ++  L     +D A   L+ ++   Y  D   +++ +    +   
Sbjct: 593 LDKRQQAHAADA---LVRKLSAVDNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNR 649

Query: 553 TEEAYKLWQKL 563
              A ++ +K+
Sbjct: 650 YALASEISEKI 660



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 111/385 (28%), Positives = 188/385 (48%), Gaps = 1/385 (0%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD  ++  +V G C+ G+   A ALL  M   G   D  T   ++R     G+F+  
Sbjct: 176 GVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGRFRDV 235

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
            G +   +  G PP ++ YT  ++ +CK+  + +A  VL++M  +G  P++ T+ SL++ 
Sbjct: 236 PGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDG 295

Query: 302 SCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
            CK G  + A  +   L+ S   +PN  TY  ++      G     + +L  M E   +P
Sbjct: 296 LCKIGWTERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAP 355

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TY  LI+G C+ G  DRA    N+M  +   P+I TYN ++G  CK+G + +A ++L
Sbjct: 356 NTNTYTTLIDGHCRGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQQAYKVL 415

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            +       P  +TY  LI    K+G +  A+ L+ QM EN   PD  T+ T+I  +C+ 
Sbjct: 416 RMATSQGLCPDKVTYTMLITEHCKQGHITYALDLFNQMAENSCHPDIDTYTTIIAMYCQQ 475

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            Q+E++  L  +    G       Y  +I G C+  K   A++V E M+     PD   +
Sbjct: 476 RQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRVGKSTSALKVFERMVQHGCLPDPITY 535

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
             ++  +  +   EEA  L++ +++
Sbjct: 536 GALISGLCKESRLEEARALFETMLD 560



 Score = 67.0 bits (162), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 39/148 (26%), Positives = 67/148 (45%)

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
            +G    P   ++  L+ G  ++G  E+A  L   M   G S D  T   ++  FCR  +
Sbjct: 172 FDGMGVRPDARSFRALVLGCCQEGRFEEADALLAAMWREGFSLDSATCTVVVRAFCRQGR 231

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
             +   L   + + GN      Y   + GLCK   V  A  VLE M+    KP+    ++
Sbjct: 232 FRDVPGLFGRMVEMGNPPNVVNYTAWVDGLCKRGYVKQAFHVLEEMVGKGLKPNVYTHTS 291

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFE 570
           ++  +   G TE A++L+ KL++   ++
Sbjct: 292 LIDGLCKIGWTERAFRLFLKLVKSSSYK 319


>gi|449507709|ref|XP_004163108.1| PREDICTED: pentatricopeptide repeat-containing protein At5g61990,
           mitochondrial-like [Cucumis sativus]
          Length = 999

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 134/516 (25%), Positives = 231/516 (44%), Gaps = 71/516 (13%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  FC + +  +A  + + M      P+      LI G I+   IE+A ++ 
Sbjct: 310 DGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRIK 369

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G   + +TYN M+GG+ K G++  A++L +EM ++G EPD  TYN ++     +
Sbjct: 370 DEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKS 429

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD-------------- 281
               +A     +   +   P   TY++LI  +C    + +A EVLD              
Sbjct: 430 HDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQMIRNGVKPNVFMY 489

Query: 282 -------------DMAIE--------GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
                        +MAIE        G  PD+  YN L+   C+  K ++A +++ ++  
Sbjct: 490 GTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGE 549

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +G++PN+ TY   ++     G     ++    M  +   P    Y ILI G C  G    
Sbjct: 550 KGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTILIKGHCDVGNTVE 609

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+++F  M+ K   PDI  Y+ ++ +L K G   EA+ +      +   P +  YN+LI 
Sbjct: 610 ALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFLKFLKTGVVPDVFLYNSLIS 669

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI--WGFCRADQVEEAVDLLKEI----- 493
           G  K+G +EKA  LY +M+ NGI+P+ + + TLI  +G+C++  + EA  L  E+     
Sbjct: 670 GFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCKSGNLTEAFKLFDEMISKGI 729

Query: 494 --------------GKRGNKMRN---------------SAYRLVIHGLCKSKKVDMAIQV 524
                         GK GN  +                SA+  +I   CK  KV  A ++
Sbjct: 730 SPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLSAFNSLIDSFCKHGKVIEAREL 789

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            + M+  +  P+   ++ ++       M EEA +L+
Sbjct: 790 FDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLF 825



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 125/443 (28%), Positives = 219/443 (49%), Gaps = 1/443 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            +  F   G L +AS +          P    C NL+R L++ + +    KV   MV + 
Sbjct: 178 FIDKFRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAK 237

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD  TY  ++   CK G +     +L EM    C+P++ TYN  +  +   G   +A+
Sbjct: 238 IVPDVYTYTNVIKAHCKVGDVIKGKMVLSEME-KECKPNLFTYNAFIGGLCQTGAVDEAL 296

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              K  + KG  P   TYT+L++  CKQ     A  + + M   G +P+  TY +L++  
Sbjct: 297 EVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGF 356

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+G  ++A+ + + +++RG++ N +TYN ++  +   G       + + M  A   P  
Sbjct: 357 IKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDT 416

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           +TYN+LI+G  K   + +A     +M ++   P   TY+ ++  LC    L +A ++L  
Sbjct: 417 WTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSDLQKANEVLDQ 476

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  +   P +  Y TLI    ++   E A+ L   M+ NG+ PD   +  LI G CRA +
Sbjct: 477 MIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIGLCRAKK 536

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEEA  LL ++G++G K     Y   I+   KS ++ +A +  + M+SS   P++ +++ 
Sbjct: 537 VEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPNNVIYTI 596

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++K   D G T EA   ++ ++E
Sbjct: 597 LIKGHCDVGNTVEALSTFKCMLE 619



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/443 (27%), Positives = 214/443 (48%), Gaps = 7/443 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C   K+ +A  L+  M  +   P+ H     I    +   I+ A +  + M+ 
Sbjct: 525 NCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLS 584

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           SG VP+ + Y +++ G C  G    A++    M   G  PD+  Y+ I+ ++  NGK K+
Sbjct: 585 SGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKE 644

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+G +   L+ G  P +  Y  LI   CK+  I +A ++ D+M   G +P+IV YN+L+N
Sbjct: 645 AMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLIN 704

Query: 301 --FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
               CK G   +A  + + ++S+G+ P+   Y  L+   G  G    ++K L + +EA  
Sbjct: 705 DYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEG---NLEKALSLFHEAQQ 761

Query: 359 SP--TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
               ++  +N LI+  CK+G V  A   F+ MV K   P+IVTY  ++ A  K  M+ EA
Sbjct: 762 KSVGSLSAFNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEA 821

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            QL   +   +  P  +TY +L+    + G   K + L+  M   GI+ D I +  +   
Sbjct: 822 EQLFLDMETRNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASA 881

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +C+  +  EA+ LL +    G K+ +  +  +I  LCK K++   +++L  M        
Sbjct: 882 YCKEGKSLEALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLS 941

Query: 537 DTVFSTIVKKVADDGMTEEAYKL 559
               +T++      G  +EA K+
Sbjct: 942 SKTCNTLLLGFYKSGNEDEASKV 964



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 123/481 (25%), Positives = 213/481 (44%), Gaps = 37/481 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  +   C  G + +A ++  +M  +   PD H    L+ G  +  R ++A  + + M
Sbjct: 278 TYNAFIGGLCQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG  P+  TY  ++ G  K G I  A+ + DEM   G + +V+TYN ++  +   G+ 
Sbjct: 338 PSSGLNPNRFTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEM 397

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  + + L  G  P   TY +LI+   K   +A+A E+L +M     +P   TY+ L
Sbjct: 398 AKAMSLFNEMLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVL 457

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C       A  V++ ++  G++PN   Y TL+ +      ++   ++L IM     
Sbjct: 458 ISGLCHSSDLQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGV 517

Query: 359 SPTVFTYNILINGLC-----------------------------------KYGLVDRAIN 383
            P +F YN LI GLC                                   K G +  A  
Sbjct: 518 LPDLFCYNCLIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAER 577

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F  M+S    P+ V Y  ++   C  G   EAL     +      P +  Y+ +I  L+
Sbjct: 578 YFKDMLSSGIVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLS 637

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G  ++AM ++ + ++ G+ PD   + +LI GFC+   +E+A  L  E+   G      
Sbjct: 638 KNGKTKEAMGVFLKFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIV 697

Query: 504 AYRLVI--HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            Y  +I  +G CKS  +  A ++ + MIS    PD  ++  ++     +G  E+A  L+ 
Sbjct: 698 VYNTLINDYGYCKSGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFH 757

Query: 562 K 562
           +
Sbjct: 758 E 758



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/431 (27%), Positives = 206/431 (47%), Gaps = 1/431 (0%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           K+   M     +PD +   N+I+   ++  + K   VL  M      P+  TYN  +GGL
Sbjct: 228 KVYGSMVEAKIVPDVYTYTNVIKAHCKVGDVIKGKMVLSEMEKECK-PNLFTYNAFIGGL 286

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C+ G +  A+ +   M   G  PD  TY  ++       + K+A   ++     G  P  
Sbjct: 287 CQTGAVDEALEVKKLMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNR 346

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            TYT LI+   K+  I  A+ + D+M   G   ++VTYN+++    K G+   A+ + N 
Sbjct: 347 FTYTALIDGFIKEGNIEEALRIKDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNE 406

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +L  G+EP++ TYN L+             ++L  M     +P+ FTY++LI+GLC    
Sbjct: 407 MLMAGIEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSVLISGLCHSSD 466

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           + +A    +QM+    +P++  Y T++ A  +E     A++LL ++  +   P L  YN 
Sbjct: 467 LQKANEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNC 526

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI GL +   +E+A +L   M E GI P+  T+   I  + ++ +++ A    K++   G
Sbjct: 527 LIIGLCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSG 586

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
               N  Y ++I G C       A+   + M+     PD   +S I+  ++ +G T+EA 
Sbjct: 587 IVPNNVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAM 646

Query: 558 KLWQKLIEWKV 568
            ++ K ++  V
Sbjct: 647 GVFLKFLKTGV 657



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 116/435 (26%), Positives = 197/435 (45%), Gaps = 5/435 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKA 171
           +E D  T N ++  +     +  A +L+  M  R   P  F + + LI GL     ++KA
Sbjct: 412 IEPDTWTYNLLIDGYLKSHDMAKACELLAEMKARKLTPSPFTYSV-LISGLCHSSDLQKA 470

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           ++VL  M+ +G  P+   Y  ++    +  +   AI LL  M  +G  PD+  YN ++  
Sbjct: 471 NEVLDQMIRNGVKPNVFMYGTLIKAYVQESRYEMAIELLKIMIANGVLPDLFCYNCLIIG 530

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +    K ++A     D   KG  P   TY   I    K   I  A     DM   G  P+
Sbjct: 531 LCRAKKVEEAKMLLVDMGEKGIKPNAHTYGAFINLYSKSGEIQVAERYFKDMLSSGIVPN 590

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            V Y  L+   C  G   +A+     +L +G+ P+   Y+ ++HSL   G       +  
Sbjct: 591 NVIYTILIKGHCDVGNTVEALSTFKCMLEKGLIPDIRAYSAIIHSLSKNGKTKEAMGVFL 650

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG--ALCK 409
              +    P VF YN LI+G CK G +++A   +++M+     P+IV YNT++     CK
Sbjct: 651 KFLKTGVVPDVFLYNSLISGFCKEGDIEKASQLYDEMLHNGINPNIVVYNTLINDYGYCK 710

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G L EA +L   +     SP    Y  LIDG  K+G +EKA+ L+ +  +  +      
Sbjct: 711 SGNLTEAFKLFDEMISKGISPDGYIYCILIDGCGKEGNLEKALSLFHEAQQKSVGSLS-A 769

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             +LI  FC+  +V EA +L  ++  +        Y ++I    K++ ++ A Q+   M 
Sbjct: 770 FNSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDME 829

Query: 530 SSRYKPDDTVFSTIV 544
           +    P+   +++++
Sbjct: 830 TRNIIPNTLTYTSLL 844



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 90/355 (25%), Positives = 167/355 (47%), Gaps = 20/355 (5%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           I L +E +V    P+++  + + ++  D+    Q    W    +   P YL +Y+IL  +
Sbjct: 72  ILLNNEDNVRKLNPEIVC-SVLQKSEIDDSVRLQNFFHWSSS-KMSTPQYLHSYSILAIR 129

Query: 267 VCKQCGIARA--------------IEVLDDMA---IEGCSPDIVTYNSLVNFSCKQGKYD 309
           +C    I +A              +E+LD +     E    ++  ++  ++     G  +
Sbjct: 130 LCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDKFRVLGFLN 189

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A  V    +S G  P  I  N L+  L          K+   M EA   P V+TY  +I
Sbjct: 190 EASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPDVYTYTNVI 249

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
              CK G V +     ++M  K C+P++ TYN  +G LC+ G ++EAL++  L+      
Sbjct: 250 KAHCKVGDVIKGKMVLSEM-EKECKPNLFTYNAFIGGLCQTGAVDEALEVKKLMMEKGLG 308

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P   TY  L+DG  K+   ++A +++  M  +G++P+  T+  LI GF +   +EEA+ +
Sbjct: 309 PDGHTYTLLVDGFCKQKRSKEAKLIFESMPSSGLNPNRFTYTALIDGFIKEGNIEEALRI 368

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
             E+  RG K+    Y  +I G+ K+ ++  A+ +   M+ +  +PD   ++ ++
Sbjct: 369 KDEMITRGLKLNVVTYNAMIGGIAKAGEMAKAMSLFNEMLMAGIEPDTWTYNLLI 423



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 53/209 (25%), Positives = 93/209 (44%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++ +FC  GK+ +A +L D M  +   P+      LI    + + +E+A ++   M  
Sbjct: 771 NSLIDSFCKHGKVIEARELFDDMVDKKLTPNIVTYTILIDAYGKAEMMEEAEQLFLDMET 830

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
              +P+T+TY  ++    + G     I+L  +M   G   D I Y  +       GK  +
Sbjct: 831 RNIIPNTLTYTSLLLSYNQIGNRFKMISLFKDMEARGIACDAIAYGVMASAYCKEGKSLE 890

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+      L +G       +  LI  +CK+  I+  +E+L +M  E  S    T N+L+ 
Sbjct: 891 ALKLLNKSLVEGIKLEDDVFDALIFHLCKEKQISTVLELLSEMGKEELSLSSKTCNTLLL 950

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              K G  D+A  V+  +   G  P S++
Sbjct: 951 GFYKSGNEDEASKVLGVMQRLGWVPTSLS 979



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 54/217 (24%), Positives = 91/217 (41%), Gaps = 18/217 (8%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQP-----------------DIVTYNTVLGA 406
           +Y+IL   LC  GL+ +A N   +++     P                 ++  ++  +  
Sbjct: 122 SYSILAIRLCNSGLIHQADNMLEKLLQTRKPPLEILDSLVRCYREFGGSNLTVFDIFIDK 181

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
               G LNEA  +          P LI  N L+  L K   M     +YG M+E  I PD
Sbjct: 182 FRVLGFLNEASSVFIASISEGFFPTLICCNNLMRDLLKANMMGLFWKVYGSMVEAKIVPD 241

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             T+  +I   C+   V +   +L E+ K   K     Y   I GLC++  VD A++V +
Sbjct: 242 VYTYTNVIKAHCKVGDVIKGKMVLSEMEKEC-KPNLFTYNAFIGGLCQTGAVDEALEVKK 300

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           LM+     PD   ++ +V        ++EA  +++ +
Sbjct: 301 LMMEKGLGPDGHTYTLLVDGFCKQKRSKEAKLIFESM 337


>gi|317106735|dbj|BAJ53231.1| JHL06P13.11 [Jatropha curcas]
          Length = 826

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 123/463 (26%), Positives = 218/463 (47%), Gaps = 35/463 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           + +  C  GK+ +   LI+    +  +P+  F   LI G  +   IE+A+ + + + + G
Sbjct: 208 VTKGLCKEGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKG 267

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV--------------------------- 215
            +P   TY  M+   CK+G+  +   LL EM                             
Sbjct: 268 FLPTVKTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAA 327

Query: 216 --------SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
                   SGCEPD+ TYNT++      GK ++A    +  +R+G  P   +YT LI   
Sbjct: 328 DAVRWMIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAF 387

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
            K     RA E+L +M+  G + D++ Y +LV+     G+ D A+ V + ++ RG+ P++
Sbjct: 388 SKNGEYVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDA 447

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
             YN L+  L  +G + A  ++L  M + + +P  F    L++G  ++G +D A   F  
Sbjct: 448 NIYNVLMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQL 507

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
            + +     +V  N ++   CK GM+N+AL     +     SP   TY+T+IDG  K+  
Sbjct: 508 TIERGIDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQND 567

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +  A+ ++G M++    P+ +T  +LI GFCR   +  A  + +E+   G +     Y +
Sbjct: 568 LRGALRMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTI 627

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +I   CK  K+  A    E M+ ++  P+D  F+ +V  + ++
Sbjct: 628 LIGYFCKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNN 670



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 214/444 (48%), Gaps = 2/444 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +L      GK+  A K+ D M  RN  + ++  CI + +GL +  ++E+   +++   
Sbjct: 171 NSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCI-VTKGLCKEGKVEEGRHLIEKRW 229

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G VP+ + YN ++ G CK G I  A  L  E+ V G  P V TY  ++      GKF+
Sbjct: 230 GKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCKKGKFE 289

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
                  +   +G    L  +  +I+   K      A + +  M   GC PD+ TYN+L+
Sbjct: 290 AVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMATYNTLI 349

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N SC +GK  +A  ++ + + RG+ PN  +Y  L+H+    G +    ++L  M+E  H+
Sbjct: 350 NGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASELLIEMSERGHT 409

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             +  Y  L++GL   G VD A+   ++M+ +   PD   YN ++  LCK+G    A QL
Sbjct: 410 LDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLCKKGRFPAAKQL 469

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +   + +P      TL+DG  + G +++A  L+   +E GI    +    +I G+C+
Sbjct: 470 LVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVVECNAMIKGYCK 529

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              + +A+   K +    +      Y  +I G  K   +  A+++  LM+    KP+   
Sbjct: 530 YGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLMLKKTCKPNVVT 589

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           F++++     +G    A K+++++
Sbjct: 590 FTSLINGFCRNGDLNRAEKVFEEM 613



 Score =  174 bits (442), Expect = 9e-41,   Method: Compositional matrix adjust.
 Identities = 118/493 (23%), Positives = 216/493 (43%), Gaps = 50/493 (10%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           KT   ++  FC +GK     KL+  M  R           +I    +     +A+  ++ 
Sbjct: 273 KTYGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRW 332

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+ SG  PD  TYN ++ G C +G++R A  LL+     G  P+  +Y  ++     NG+
Sbjct: 333 MIESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGE 392

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           + +A     +   +G    LI Y  L+  +     +  A+ V D M   G  PD   YN 
Sbjct: 393 YVRASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNV 452

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  CK+G++  A  ++  +L + + P++    TL+      G  D   K+  +  E  
Sbjct: 453 LMSGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERG 512

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
              +V   N +I G CKYG+++ A+  F +M +    PD  TY+T++    K+  L  AL
Sbjct: 513 IDTSVVECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGAL 572

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++  L+   +C P ++T+ +LI+G  + G + +A  ++ +M   G  P+ +T+  LI  F
Sbjct: 573 RMFGLMLKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYF 632

Query: 478 CRADQVEEAVDLLKEI----------------------------GKRGNKMRN------- 502
           C+  ++ +A    +++                             KR N   N       
Sbjct: 633 CKEGKLTKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFG 692

Query: 503 -----------SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
                      +AY  ++  LC+ K V  A+Q+ + M+S  + PD   F  ++  +  +G
Sbjct: 693 MMISDGWDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEG 752

Query: 552 MTEEAYKLWQKLI 564
             ++    W  +I
Sbjct: 753 RLQD----WNNVI 761



 Score =  172 bits (436), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 203/416 (48%), Gaps = 1/416 (0%)

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D   C +L++ L R    ++   +L+ M     +P     + ++      G ++ A+ L 
Sbjct: 95  DGFVCSSLLKLLARFRVFKEIENLLETMKSKELIPTCEALSFVISAYAGSGLVKEALELY 154

Query: 211 DE-MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           +  + V  C PDV   N++L  +  +GK + A   + + + +       T  I+ + +CK
Sbjct: 155 NTVIDVHNCVPDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCK 214

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
           +  +     +++    +GC P+IV YN+L++  CK G  + A L+   L  +G  P   T
Sbjct: 215 EGKVEEGRHLIEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKT 274

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y  ++++   +G ++AVDK+L  M E   + ++  +N +I+   K+G    A ++   M+
Sbjct: 275 YGAMINAFCKKGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMI 334

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
              C+PD+ TYNT++   C +G + EA +LL         P   +Y  LI   +K G   
Sbjct: 335 ESGCEPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYV 394

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A  L  +M E G + D I +  L+ G   A +V+ A+ +  ++ +RG     + Y +++
Sbjct: 395 RASELLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLM 454

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            GLCK  +   A Q+L  M+     PD  V +T+V      G  +EA KL+Q  IE
Sbjct: 455 SGLCKKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIE 510



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 112/463 (24%), Positives = 209/463 (45%), Gaps = 11/463 (2%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++   CS+GK+ +A +L++   RR   P+      LI    +     +AS+
Sbjct: 339 EPDMATYNTLINGSCSKGKVREAEELLEHAIRRGLFPNKFSYTPLIHAFSKNGEYVRASE 398

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L  M   G   D I Y  +V GL   G++  A+ + D+M   G  PD   YN ++  + 
Sbjct: 399 LLIEMSERGHTLDLIAYGALVHGLVVAGEVDVALTVRDKMMERGILPDANIYNVLMSGLC 458

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+F  A     + L +   P       L++   +   +  A ++       G    +V
Sbjct: 459 KKGRFPAAKQLLVEMLDQNVTPDAFVNATLVDGFIRHGNLDEAKKLFQLTIERGIDTSVV 518

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
             N+++   CK G  +DA+L    + +    P+  TY+T++     +       ++  +M
Sbjct: 519 ECNAMIKGYCKYGMMNDALLCFKRMFNGVHSPDEFTYSTIIDGYVKQNDLRGALRMFGLM 578

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            + +  P V T+  LING C+ G ++RA   F +M S   +P++VTY  ++G  CKEG L
Sbjct: 579 LKKTCKPNVVTFTSLINGFCRNGDLNRAEKVFEEMRSFGFEPNVVTYTILIGYFCKEGKL 638

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGL---------AKKGCMEKAMVL--YGQMMENG 462
            +A      +  + C P   T+N L++GL         +K+   +  + L  +G M+ +G
Sbjct: 639 TKACFFFEQMLINKCIPNDATFNYLVNGLTNNNGIAISSKRSNSQPNLTLEFFGMMISDG 698

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
                  + +++   C+   V+ A+ L  ++  +G      ++  ++HGLC   ++    
Sbjct: 699 WDWRIAAYNSILLCLCQHKMVKPALQLHDKMMSKGFPPDPVSFIALLHGLCLEGRLQDWN 758

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            V+    + R       +S  + +   +G+T +A  L Q L+E
Sbjct: 759 NVIPCNFNERQLQIAVKYSEKLDQFLSEGLTSDASLLLQTLVE 801



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 65/210 (30%), Positives = 100/210 (47%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P VF  N L+N L  +G V+ A   +++MV +N   D  T   V   LCKEG + E   L
Sbjct: 165 PDVFACNSLLNLLVHHGKVEIARKVYDEMVDRNGDVDNYTVCIVTKGLCKEGKVEEGRHL 224

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           +    G  C P ++ YNTLIDG  K G +E+A +L+ ++   G  P   T+  +I  FC+
Sbjct: 225 IEKRWGKGCVPNIVFYNTLIDGYCKNGDIERANLLFKELKVKGFLPTVKTYGAMINAFCK 284

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             + E    LL E+ +RG  +    +  +I    K      A   +  MI S  +PD   
Sbjct: 285 KGKFEAVDKLLVEMKERGLAVSLQIFNGIIDARFKHGCEIEAADAVRWMIESGCEPDMAT 344

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           ++T++      G   EA +L +  I   +F
Sbjct: 345 YNTLINGSCSKGKVREAEELLEHAIRRGLF 374


>gi|255578371|ref|XP_002530052.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223530468|gb|EEF32352.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 554

 Score =  198 bits (503), Expect = 8e-48,   Method: Compositional matrix adjust.
 Identities = 129/429 (30%), Positives = 206/429 (48%), Gaps = 3/429 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID-RIEKASKVLQI 177
           T ++ +   C     T   +L+  M   N +PD  +  N+   L+ ++ RI+ A +V + 
Sbjct: 81  TYSRFITGLCKVKNFTFIDELLHDMETLNCLPDI-WAFNIYLHLLFVEGRIDLALEVFEK 139

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +V +G  PD +TY +++ G+CK  +  +AI    +M   G  PD      I+  + D  K
Sbjct: 140 IVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRK 199

Query: 238 FKQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
              A     D ++ G      + Y  LI   C+   I +A  +   M   GC PD+VTYN
Sbjct: 200 VDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYN 259

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
             +N+ C +   DDA  ++  +   G+EP+  +YN LL  +    C D    ++      
Sbjct: 260 VFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWP 319

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
                V +YN +I   CK G    A   F +M  K   PD+VT+   + A   +G  N A
Sbjct: 320 KGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIA 379

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
            +LL  +     SP  I Y T+ID L K G +E A  ++  M+E GISPD I+   LI G
Sbjct: 380 KKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALING 439

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           FC+  +V EA+ L +E+  RG+      Y+L+I GL + KK+ +A  V   M+   +  D
Sbjct: 440 FCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLD 499

Query: 537 DTVFSTIVK 545
             +  T+++
Sbjct: 500 RAIAQTLIR 508



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 111/420 (26%), Positives = 187/420 (44%), Gaps = 48/420 (11%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           + Y   + G  K G I  A+ + DEMS S C    I YN  +  + ++ +F  A  ++  
Sbjct: 10  LIYRSRIAGYVKAGLIDKAVQVFDEMSQSNCRVFSIDYNRFIGVLINHSRFDLANHYYSQ 69

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
              +G      TY+  I  +CK        E+L DM    C PDI  +N  ++    +G+
Sbjct: 70  MGTRGFSLSSFTYSRFITGLCKVKNFTFIDELLHDMETLNCLPDIWAFNIYLHLLFVEGR 129

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD----------------------- 344
            D A+ V   ++  G +P+ +TY  ++H +     +D                       
Sbjct: 130 IDLALEVFEKIVKNGRKPDVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGA 189

Query: 345 -------------AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR--AINSFNQMV 389
                        A + I+D+M       +   YN LI+G C+ G +D+  AI SF  M 
Sbjct: 190 IVVGLCDGRKVDLAYELIIDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSF--MR 247

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
              C+PD+VTYN  L   C E ML++A +LL L+  S   P + +YN L+ G+ K  C +
Sbjct: 248 RNGCEPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPD 307

Query: 450 KAMVLYGQMMENGISP----DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           KA +L    M N + P    D +++ T+I  FC+      A  L +E+G++G       +
Sbjct: 308 KAYLL----MTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTF 363

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            + I         ++A ++L+ M      PD   ++TI+  +   G  E A+ ++  ++E
Sbjct: 364 TIFIKAFLGKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVE 423



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/373 (28%), Positives = 182/373 (48%), Gaps = 7/373 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+   C   K   A +    M  +   PD   C  ++ GL    +++ A +++
Sbjct: 148 DVVTYTIIIHGVCKIKKFDTAIQFWRDMIHKGFSPDNKACGAIVVGLCDGRKVDLAYELI 207

Query: 176 QIMVMSGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             ++ SG V   T+ YN ++ G C+ G+I  A A+   M  +GCEPD++TYN  L    D
Sbjct: 208 IDVMKSGRVKLSTLVYNALISGFCRAGRIDKAQAIKSFMRRNGCEPDLVTYNVFLNYFCD 267

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK-QCGIARAIEVLDDMAIEGCSPDIV 293
                 A    K   R G  P + +Y  L++ +CK  C     + + + M  +G   D+V
Sbjct: 268 ELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYLLMTNKMWPKGLC-DVV 326

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN+++   CK G    A  +   +  +G+ P+ +T+   + +   +G ++   K+LD M
Sbjct: 327 SYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFLGKGSFNIAKKLLDQM 386

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E   SP    Y  +I+ LCK G V+ A + F  MV +   PD++++N ++   CK   +
Sbjct: 387 TEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVISFNALINGFCKCSRV 446

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +EA+ L   +      P  +TY  +I GL ++  +  A +++GQMM+ G + D    +TL
Sbjct: 447 SEAMHLYEEMQNRGSYPDEVTYKLIIGGLIEEKKISIACMVWGQMMDKGFTLDRAIAQTL 506

Query: 474 IWGFCRADQVEEA 486
           I    R + +E A
Sbjct: 507 I----RGNSIENA 515



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 67/224 (29%), Positives = 111/224 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N  L  FC    L DA KL+ +M R    PD +    L++G+ + +  +KA  
Sbjct: 252 EPDLVTYNVFLNYFCDELMLDDAKKLLKLMERSGIEPDVYSYNQLLKGICKGNCPDKAYL 311

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++   +   G+ D ++YN ++   CK G   SA  L +EM   G  PDV+T+   ++   
Sbjct: 312 LMTNKMWPKGLCDVVSYNTIIKAFCKIGDTTSAYKLFEEMGQKGIPPDVVTFTIFIKAFL 371

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G F  A          G  P  I YT +I+ +CK   +  A  +  DM  +G SPD++
Sbjct: 372 GKGSFNIAKKLLDQMTEMGLSPDCIFYTTIIDHLCKSGKVEMAHSIFCDMVEQGISPDVI 431

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++N+L+N  CK  +  +A+ +   + +RG  P+ +TY  ++  L
Sbjct: 432 SFNALINGFCKCSRVSEAMHLYEEMQNRGSYPDEVTYKLIIGGL 475


>gi|32489924|emb|CAE05516.1| OSJNBa0038P21.9 [Oryza sativa Japonica Group]
          Length = 825

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 232/454 (51%), Gaps = 1/454 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N ++  F   G++  A  L   M  +  +P+     +LI GL +   ++KA +VL
Sbjct: 223 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 282

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV +G  P+ +TYN ++ G    G  + ++ +  EMS S   PDV   N+ +  +  +
Sbjct: 283 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 342

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K+A   +   + KG  P +I+Y  L+        IA    + + M  EG  PD   +
Sbjct: 343 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 402

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N   + G  D ++L+  ++  +G+ P+ IT++T++ +    G  D   +  + M +
Sbjct: 403 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 462

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT-VLGALCKEGMLN 414
               P    Y+ LI G C    + +A    + M+SK   P  + + T ++  LCKEG + 
Sbjct: 463 TGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 522

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           E   ++ L+  +   P LIT+N+L+DG    G M++A+ L   M   G+ PD  T+ TL+
Sbjct: 523 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 582

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C+  ++++A+ L +++  +   + + +Y +++HGL ++++  +A ++   MI S   
Sbjct: 583 DGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMA 642

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
                ++T++  +  +  T+EA  L +KL    V
Sbjct: 643 VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNV 676



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 211/455 (46%), Gaps = 1/455 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  +   C  G++ +A  + D M  +   PD      L+ G      I     +  +MV 
Sbjct: 333 NSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVC 392

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G VPD   +N ++    + G +  ++ + ++M+  G  PD+IT++T++      G+   
Sbjct: 393 EGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDD 452

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD-IVTYNSLV 299
           A+  +   +  G PP    Y+ LI+  C +  + +A E++ DM  +G  P  I  + S++
Sbjct: 453 AMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSII 512

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  CK+G+  +   V++ ++  G  PN IT+N+L+      G       +LD M      
Sbjct: 513 NNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVE 572

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P ++TYN L++G CK+G +D A+  F  M+ K      V+YN +L  L +      A ++
Sbjct: 573 PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEM 632

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            H +  S  +  + TY T++ GL +  C ++A +L  ++    +  D +T   +I    +
Sbjct: 633 FHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFK 692

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             + +EA +L   I   G       YR++I  L K +  + A  +   M  S   PD  +
Sbjct: 693 VGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 752

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            + I++ + + G   +A     K+ +  +  + TT
Sbjct: 753 LNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATT 787



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 202/421 (47%), Gaps = 10/421 (2%)

Query: 152 FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD 211
           ++  IN  R   R  R +    V   ++ +G  PD  +YN ++ G  K G++  A  L  
Sbjct: 192 YNILINCYR---RARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFY 248

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           +M   G  P+V+TY++++  +    +  +A    +  +  G  P  +TY  LI       
Sbjct: 249 KMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSG 308

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
               ++ V  +M+     PD+   NS +   CK G+  +A  + ++++ +G +P+ I+Y 
Sbjct: 309 MWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYG 368

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            LLH   + GC   +D + ++M      P    +N LIN   + G++D+++  F  M  +
Sbjct: 369 ALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ 428

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              PDI+T++TV+ A C+ G L++A++  + +  +   P    Y+ LI G   +  + KA
Sbjct: 429 GVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKA 488

Query: 452 MVLYGQMMENGISPDDITHRT-LIWGFCRADQVEEA---VDLLKEIGKRGNKMRNSAYRL 507
             L   M+  GI P  I   T +I   C+  +V E    VDL+   G+R N +    +  
Sbjct: 489 KELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI---TFNS 545

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           ++ G C    +  A+ +L+ M S   +PD   ++T+V      G  ++A  L++ ++  +
Sbjct: 546 LVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR 605

Query: 568 V 568
           V
Sbjct: 606 V 606



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 174/355 (49%), Gaps = 4/355 (1%)

Query: 206 AIALLDEMSVSGC---EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           A+ L   M    C    P + TYN ++       +    +  +   LR G  P + +Y  
Sbjct: 170 AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 229

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI+   K+  + +A ++   M  +G  P++VTY+SL+N  CK  + D A  V+  ++  G
Sbjct: 230 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 289

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + PN++TYN L+H   + G W    ++   M+ +   P V   N  +  LCK+G +  A 
Sbjct: 290 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 349

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           + F+ MV K  +PD+++Y  +L      G +     L +++      P    +NTLI+  
Sbjct: 350 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 409

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
           A+ G M+K+++++  M + G++PD IT  T+I  FCR  ++++A++    +   G     
Sbjct: 410 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 469

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD-DTVFSTIVKKVADDGMTEEA 556
           + Y  +I G C  + +  A +++  M+S    P     F++I+  +  +G   E 
Sbjct: 470 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEG 524



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 178/441 (40%), Gaps = 71/441 (16%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L  + + G +     L ++M     +PD H    LI    R+  ++K+  + + M   G
Sbjct: 370 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 429

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD IT++ ++   C+ G++  A+   + M  +G  PD   Y+ +++   +     +A 
Sbjct: 430 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAK 489

Query: 243 GFWKDQLRKGCPP------------------------------------YLITYTILIEQ 266
               D L KG PP                                     LIT+  L++ 
Sbjct: 490 ELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDG 549

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
            C    +  A+ +LD M   G  PDI TYN+LV+  CK G+ DDA+ +  ++L + +   
Sbjct: 550 YCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLT 609

Query: 327 SITYNTLLHSLGS-----------------------------------RGCWDAVDKILD 351
           S++YN +LH L                                       C D  + +L+
Sbjct: 610 SVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLE 669

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            +   +    + T+NI+I  + K G    A   F  + +    P I+TY  ++  L KE 
Sbjct: 670 KLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEE 729

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
              +A  L   +  SSC+P     N +I  L  KG + KA     ++ + GI P+  T  
Sbjct: 730 SFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTS 789

Query: 472 TLIWGFCRADQVEEAVDLLKE 492
            LI+ F    +  E + LL E
Sbjct: 790 LLIYLFSVNGKYREYIKLLPE 810



 Score =  131 bits (330), Expect = 8e-28,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 160/328 (48%), Gaps = 1/328 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           V  D    + ++Q  C+R  L  A +LI D++++    P   F  ++I  L +  R+ + 
Sbjct: 465 VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEG 524

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             V+ +++ +G  P+ IT+N +V G C  G ++ A+ LLD M   G EPD+ TYNT++  
Sbjct: 525 KDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDG 584

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
              +G+   A+  ++D L K      ++Y I++  + +      A E+  +M   G +  
Sbjct: 585 YCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVS 644

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           I TY +++   C+    D+A +++  L S  ++ + +T+N ++ ++   G      ++  
Sbjct: 645 IHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFA 704

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            ++     PT+ TY ++I  L K    + A N F+ M   +C PD    N ++  L  +G
Sbjct: 705 AISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKG 764

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLI 439
            + +A   L  ++     P   T + LI
Sbjct: 765 EVAKAGNYLSKIDKKGILPEATTTSLLI 792



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 134/310 (43%), Gaps = 38/310 (12%)

Query: 274 ARAIEVLDDM---AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           A A+E+   M   A    +P I TYN L+N   +  + D  + V   LL  G+ P+  +Y
Sbjct: 168 ALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSY 227

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N L+      G  D    +   M E    P V TY+ LINGLCK   +D+A     QMV 
Sbjct: 228 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG 287

Query: 391 KNCQPDIVTY-----------------------------------NTVLGALCKEGMLNE 415
              +P+ +TY                                   N+ + ALCK G + E
Sbjct: 288 AGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKE 347

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  +   +      P +I+Y  L+ G A  GC+     L+  M+  G+ PD     TLI 
Sbjct: 348 ARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLIN 407

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            + R   +++++ + +++ K+G       +  VI   C+  ++D A++    MI +   P
Sbjct: 408 AYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPP 467

Query: 536 DDTVFSTIVK 545
           D  V+S +++
Sbjct: 468 DTAVYSCLIQ 477



 Score = 43.1 bits (100), Expect = 0.35,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 61/138 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N +++     G+  +A +L   ++    +P       +I  LI+ +  E A 
Sbjct: 676 VKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDAD 735

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M  S   PD+   N ++  L  +G++  A   L ++   G  P+  T + ++   
Sbjct: 736 NLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLF 795

Query: 233 FDNGKFKQAIGFWKDQLR 250
             NGK+++ I    ++ R
Sbjct: 796 SVNGKYREYIKLLPEKYR 813


>gi|224133106|ref|XP_002327962.1| predicted protein [Populus trichocarpa]
 gi|222837371|gb|EEE75750.1| predicted protein [Populus trichocarpa]
          Length = 487

 Score =  197 bits (502), Expect = 9e-48,   Method: Compositional matrix adjust.
 Identities = 116/388 (29%), Positives = 198/388 (51%), Gaps = 3/388 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G +   SK I+++     +  FHF I LI    R+ R++ A  VL  ++  G  PD +T+
Sbjct: 101 GTVLSLSKRIELLRIERDV--FHFNI-LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTF 157

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           + ++ GLC   +   A+   DEM  SG +P++ TYNTI++     GK   A+G  K   +
Sbjct: 158 SSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDK 217

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P ++ Y  +I+ +CK   ++ A+++  ++  +G  PD+ TY+ L++  C   + ++
Sbjct: 218 AGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEE 277

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  + N ++S  + P+ +T+N L+  L   G       I+ IM E    P   TYN L+N
Sbjct: 278 ASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMN 337

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G C    V  A   F+ M++K C P++V+YN ++   CK   ++EA +L   ++     P
Sbjct: 338 GYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIP 397

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
               YNTLI GL + G   +A  L+  M   G SPD +T   L+   C+   ++ A+ L 
Sbjct: 398 NTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLF 457

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           + +     K     Y ++I  + KS K+
Sbjct: 458 RAMQDSCLKPNLVTYDILIRAMYKSGKI 485



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 101/333 (30%), Positives = 174/333 (52%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + ++   C   K   A +  D M      P+ H    +I+G  +I +   A  
Sbjct: 151 EPDAVTFSSLINGLCFEDKFARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVG 210

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ M  +GG PD + YN ++ GLCK   +  A+ +  E+   G  PDV TY+ ++  + 
Sbjct: 211 LLKKMDKAGGRPDIVIYNTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLC 270

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           ++ + ++A   + + +     P ++T+ IL++++CK+  ++ A  ++  M  +G  P+  
Sbjct: 271 NSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYA 330

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYNSL+N  C Q K  +A +V + ++++G  PN ++YN L++        D   ++ D M
Sbjct: 331 TYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEM 390

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +     P  F YN LI+GLC+ G    A   F  M ++ C PD+VT   +L +LCK G L
Sbjct: 391 SFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYL 450

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           + AL+L   +  S   P L+TY+ LI  + K G
Sbjct: 451 DNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 111/400 (27%), Positives = 204/400 (51%), Gaps = 8/400 (2%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           IE A      M+    +P  + ++ ++  L +     + ++L   + +   E DV  +N 
Sbjct: 65  IEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDVFHFNI 124

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++       +   A       ++ G  P  +T++ LI  +C +   ARA+E  D+M   G
Sbjct: 125 LINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDEMVASG 184

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-V 346
             P++ TYN+++   CK GK   AV ++  +   G  P+ + YNT++  L    C D  V
Sbjct: 185 YQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGL----CKDRLV 240

Query: 347 DKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
            + LDI +E       P VFTY+IL++GLC     + A   FN+M+S N  PD+VT+N +
Sbjct: 241 SEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNIL 300

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +  LCKEGML+EA  ++ ++      P   TYN+L++G   +  + +A +++  M+  G 
Sbjct: 301 VDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGC 360

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            P+ +++  LI G+C+A +++EA +L  E+  RG       Y  +I GLC++ +   A +
Sbjct: 361 MPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARE 420

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + + M +    PD    + ++  +   G  + A +L++ +
Sbjct: 421 LFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAM 460



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 111/434 (25%), Positives = 216/434 (49%), Gaps = 14/434 (3%)

Query: 125 QNFCSRGKLTDASKLIDIMARRNQIPDFHFCI----NLIRGLIRIDR---IEKASKVLQI 177
           Q  CS   + DA    + M  ++ +P    CI     L+  L+RI     +   SK +++
Sbjct: 57  QKGCSLTNIEDALFSFNHMIHKHPLP----CIVEFDKLLSALVRIKHYGTVLSLSKRIEL 112

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           + +     D   +N+++    +  ++  A ++L ++   G EPD +T+++++  +    K
Sbjct: 113 LRIE---RDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDK 169

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A+ F+ + +  G  P L TY  +I+  CK      A+ +L  M   G  PDIV YN+
Sbjct: 170 FARAMEFFDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNT 229

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  CK     +A+ + + +  +G+ P+  TY+ L+H L +    +    + + M   +
Sbjct: 230 IIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLN 289

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V T+NIL++ LCK G++  A      M+ K  +P+  TYN+++   C +  + EA 
Sbjct: 290 IMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEAR 349

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +   +    C P +++YN LI+G  K   +++A  L+ +M   G+ P+   + TLI G 
Sbjct: 350 MVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGL 409

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+A +  EA +L K++  +G         +++  LCK   +D A+++   M  S  KP+ 
Sbjct: 410 CQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNL 469

Query: 538 TVFSTIVKKVADDG 551
             +  +++ +   G
Sbjct: 470 VTYDILIRAMYKSG 483



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/261 (29%), Positives = 134/261 (51%), Gaps = 2/261 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N I+   C    +++A  +   +  +   PD F + I L+ GL   D+ E+AS +   M+
Sbjct: 228 NTIIDGLCKDRLVSEALDIFSEIKGKGVRPDVFTYSI-LMHGLCNSDQKEEASALFNEMM 286

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
               +PD +T+N++V  LCK G +  A  ++  M   G EP+  TYN+++       K  
Sbjct: 287 SLNIMPDVVTFNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVF 346

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A   +   + KGC P +++Y ILI   CK   I  A E+ D+M+  G  P+   YN+L+
Sbjct: 347 EARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLI 406

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  C+ G++ +A  +  ++ ++G  P+ +T   LL SL   G  D   ++   M ++   
Sbjct: 407 SGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLK 466

Query: 360 PTVFTYNILINGLCKYGLVDR 380
           P + TY+ILI  + K G + R
Sbjct: 467 PNLVTYDILIRAMYKSGKIYR 487



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/266 (28%), Positives = 130/266 (48%)

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C     +DA+   N+++ +   P  + ++ LL +L     +  V  +   +        V
Sbjct: 60  CSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIERDV 119

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           F +NILIN   +   VD A +   +++    +PD VT+++++  LC E     A++    
Sbjct: 120 FHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEFFDE 179

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  S   P L TYNT+I G  K G    A+ L  +M + G  PD + + T+I G C+   
Sbjct: 180 MVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCKDRL 239

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V EA+D+  EI  +G +     Y +++HGLC S + + A  +   M+S    PD   F+ 
Sbjct: 240 VSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNI 299

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           +V K+  +GM  EA  + + +IE  V
Sbjct: 300 LVDKLCKEGMLSEAQGIIKIMIEKGV 325



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 73/300 (24%), Positives = 142/300 (47%)

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           ++ C    I  A+   + M  +   P IV ++ L++   +   Y   + +   +    +E
Sbjct: 57  QKGCSLTNIEDALFSFNHMIHKHPLPCIVEFDKLLSALVRIKHYGTVLSLSKRIELLRIE 116

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            +   +N L++        D    +L  + +    P   T++ LINGLC      RA+  
Sbjct: 117 RDVFHFNILINCFSRLQRVDFAFSVLGKIIKLGFEPDAVTFSSLINGLCFEDKFARAMEF 176

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F++MV+   QP++ TYNT++   CK G    A+ LL  ++ +   P ++ YNT+IDGL K
Sbjct: 177 FDEMVASGYQPNLHTYNTIIKGFCKIGKTTVAVGLLKKMDKAGGRPDIVIYNTIIDGLCK 236

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              + +A+ ++ ++   G+ PD  T+  L+ G C +DQ EEA  L  E+           
Sbjct: 237 DRLVSEALDIFSEIKGKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVT 296

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + +++  LCK   +  A  ++++MI    +P+   +++++          EA  ++  +I
Sbjct: 297 FNILVDKLCKEGMLSEAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMI 356



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 63/232 (27%), Positives = 114/232 (49%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  V  D  T + ++   C+  +  +AS L + M   N +PD      L+  L +   + 
Sbjct: 252 GKGVRPDVFTYSILMHGLCNSDQKEEASALFNEMMSLNIMPDVVTFNILVDKLCKEGMLS 311

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A  +++IM+  G  P+  TYN ++ G C + ++  A  + D M   GC P+V++YN ++
Sbjct: 312 EAQGIIKIMIEKGVEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILI 371

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                  +  +A   + +   +G  P    Y  LI  +C+      A E+  DM  +GCS
Sbjct: 372 NGYCKAQRIDEARELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCS 431

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           PD+VT   L++  CK G  D+A+ +   +    ++PN +TY+ L+ ++   G
Sbjct: 432 PDLVTCTILLDSLCKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSG 483



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 47/163 (28%), Positives = 80/163 (49%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +  T N ++  +C + K+ +A  + D M  +  +P+      LI G  +  RI++A 
Sbjct: 325 VEPNYATYNSLMNGYCLQNKVFEARMVFDAMITKGCMPNVVSYNILINGYCKAQRIDEAR 384

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M   G +P+T  YN ++ GLC+ G+   A  L  +M   GC PD++T   +L ++
Sbjct: 385 ELFDEMSFRGLIPNTFNYNTLISGLCQAGRHCEARELFKDMQAQGCSPDLVTCTILLDSL 444

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
              G    A+  ++        P L+TY ILI  + K   I R
Sbjct: 445 CKLGYLDNALRLFRAMQDSCLKPNLVTYDILIRAMYKSGKIYR 487


>gi|242069901|ref|XP_002450227.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
 gi|241936070|gb|EES09215.1| hypothetical protein SORBIDRAFT_05g002210 [Sorghum bicolor]
          Length = 894

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/425 (27%), Positives = 204/425 (48%), Gaps = 1/425 (0%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
           R     D+  C+ ++RGL    R+E+  ++++     G VP  + YN+++ G C+RG + 
Sbjct: 270 REGGADDYSTCV-MVRGLCLEGRVEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVG 328

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
             + LL EM + G  P V+TY  I+  +       +      +   +G  P +  Y  +I
Sbjct: 329 RGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVI 388

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             +CK    ++A+ VL+ M      PD+VT+N+L+   C++G  ++A+ ++   + R +E
Sbjct: 389 YALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELE 448

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN ++Y  L+H    RG       +L  M    H+P V T   LI+GL   G VD A+  
Sbjct: 449 PNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMV 508

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M  +   PD   YN ++  LCK+ ML+ A  LL  +      P    Y TLIDG  +
Sbjct: 509 REKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGFIR 568

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              +  A  ++  M E G   D + +  +I G+C++  + EAV  +  + K G       
Sbjct: 569 SDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDEFT 628

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I G  K   +  A++ L  M+  R KP+   +++++    + G T+ A  L+  + 
Sbjct: 629 YTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFASMQ 688

Query: 565 EWKVF 569
              +F
Sbjct: 689 SEGLF 693



 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 121/424 (28%), Positives = 199/424 (46%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C RG +     L+  M  +  +P       +I  L R   + K   +L  M  
Sbjct: 315 NVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGAIIHWLGRKSDLTKIESLLWEMKE 374

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+   YN ++  LCK      A+A+L++M  S  +PDV+T+NT++      G  ++
Sbjct: 375 RGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEE 434

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   ++ +R+   P  ++YT LI   C +  +  A ++L +M   G +PD+VT  +L++
Sbjct: 435 ALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIH 494

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
                G+ D+A++V   +  R + P++  YN L+  L  +    A   +L  M E    P
Sbjct: 495 GLVVSGQVDEALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQP 554

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             F Y  LI+G  +   +  A   F  M  K    DIV YN ++   CK GM+NEA+  +
Sbjct: 555 DKFVYTTLIDGFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCM 614

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C P   TY TLIDG AKKG ++ A+     MM+    P+ +T+ +LI G+C  
Sbjct: 615 SSMRKVGCIPDEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNI 674

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
              + A  L   +   G       Y ++I  L K  K   A    E M+ +   P+D   
Sbjct: 675 GNTDSAEVLFASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATM 734

Query: 541 STIV 544
             +V
Sbjct: 735 HYLV 738



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 103/380 (27%), Positives = 176/380 (46%), Gaps = 15/380 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E ++ +   ++  FC RG++  AS L+  M  R   PD      LI GL+   ++++A 
Sbjct: 447 LEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEAL 506

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V + M     +PD   YN+++ GLCK+  + +A  LL EM     +PD   Y T++   
Sbjct: 507 MVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLIDGF 566

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + K   A   ++    KG    ++ Y  +I+  CK   +  A+  +  M   GC PD 
Sbjct: 567 IRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIPDE 626

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY +L++   K+G    A+  + +++ R  +PN +TY +L+    + G  D+ + +   
Sbjct: 627 FTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLFAS 686

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL--CKE 410
           M      P V  Y +LI  L K     +A   F  M+  +C P+  T + ++  L  C+ 
Sbjct: 687 MQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNCRY 746

Query: 411 GMLN----------EALQLLHLLNG---SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           GM+N          +   LL +  G       P +  YN +I  L +   + KAM L  +
Sbjct: 747 GMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELKEK 806

Query: 458 MMENGISPDDITHRTLIWGF 477
           M   G  PD +T  +L++GF
Sbjct: 807 MSNKGCLPDPVTFLSLLYGF 826



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 110/446 (24%), Positives = 194/446 (43%), Gaps = 15/446 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C     + A  +++ M      PD      LI    R   +E+A K+L+  + 
Sbjct: 385 NTVIYALCKCRSASQALAVLNQMVASRFDPDVVTFNTLIAAFCREGDVEEALKLLREAIR 444

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P+ ++Y  ++ G C RG++  A  LL EM   G  PDV+T   ++  +  +G+  +
Sbjct: 445 RELEPNQLSYTPLIHGFCVRGEVMVASDLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDE 504

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +    +   P    Y +LI  +CK+  ++ A  +L +M  +   PD   Y +L++
Sbjct: 505 ALMVREKMAERQVMPDANIYNVLISGLCKKRMLSAAKNLLVEMLEQKVQPDKFVYTTLID 564

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +  K  DA  +   +  +G   + + YN ++      G  +     +  M +    P
Sbjct: 565 GFIRSDKLSDARKIFEFMEEKGGYRDIVAYNAMIKGYCKSGMMNEAVMCMSSMRKVGCIP 624

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             FTY  LI+G  K G +  A+     M+ + C+P+IVTY +++   C  G  + A  L 
Sbjct: 625 DEFTYTTLIDGYAKKGDIKAALRFLCDMMKRRCKPNIVTYASLICGYCNIGNTDSAEVLF 684

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF--C 478
             +      P ++ Y  LI  L KK    +A   +  M+ N  SP+D T   L+ G   C
Sbjct: 685 ASMQSEGLFPNVVHYTVLIGSLFKKDKAIQAAAYFEHMLLNHCSPNDATMHYLVNGLTNC 744

Query: 479 R----------ADQVEEA---VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           R           DQ  +    +D+ K +   G   R SAY  +I  LC+   +  A+++ 
Sbjct: 745 RYGMINSNCSDTDQAHKKSALLDVFKGLISDGLDPRISAYNAIIFSLCRHNMLGKAMELK 804

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDG 551
           E M +    PD   F +++   +  G
Sbjct: 805 EKMSNKGCLPDPVTFLSLLYGFSSVG 830



 Score =  113 bits (282), Expect = 3e-22,   Method: Compositional matrix adjust.
 Identities = 79/287 (27%), Positives = 135/287 (47%), Gaps = 2/287 (0%)

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT--LLHSLGSRGC 342
           + G  PD    N L+     + +++ A  +   +L+R  E  +  Y+T  ++  L   G 
Sbjct: 232 LHGALPDAPHCNRLLRLLVDRRRWECARRLYGEMLARDREGGADDYSTCVMVRGLCLEGR 291

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            +   ++++        P    YN+LI+G C+ G V R +    +M  K   P +VTY  
Sbjct: 292 VEEGRRLIEARWGEGCVPGAVFYNVLIDGYCRRGDVGRGLLLLGEMEMKGIMPTVVTYGA 351

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  L ++  L +   LL  +     SP +  YNT+I  L K     +A+ +  QM+ + 
Sbjct: 352 IIHWLGRKSDLTKIESLLWEMKERGLSPNVQIYNTVIYALCKCRSASQALAVLNQMVASR 411

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             PD +T  TLI  FCR   VEEA+ LL+E  +R  +    +Y  +IHG C   +V +A 
Sbjct: 412 FDPDVVTFNTLIAAFCREGDVEEALKLLREAIRRELEPNQLSYTPLIHGFCVRGEVMVAS 471

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            +L  MI   + PD      ++  +   G  +EA  + +K+ E +V 
Sbjct: 472 DLLVEMIGRGHTPDVVTLGALIHGLVVSGQVDEALMVREKMAERQVM 518


>gi|224113307|ref|XP_002316451.1| predicted protein [Populus trichocarpa]
 gi|222865491|gb|EEF02622.1| predicted protein [Populus trichocarpa]
          Length = 707

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 118/415 (28%), Positives = 213/415 (51%), Gaps = 1/415 (0%)

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D + C  L+ GL +  ++EKA +VL+ +V  G VP  + YN +V G C+ G +  AI  +
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
           ++M   G  P+ I +N+++    +     +A  + K  + KG  P + TY ILI+   + 
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL 360

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           C  +R  ++L++M   G  P++++Y SL+N  CK GK  +A +V+ +++ RG+ PN+  Y
Sbjct: 361 CVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIY 420

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N L+    + G      +  D M++     T+ TYN LI GLCK G +  A   F  + S
Sbjct: 421 NMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITS 480

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
               PD++TYN+++      G   + L+L   +      P + T++ LI G +K+G   K
Sbjct: 481 TGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK 540

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
              L+ +M++  +SPD + +  +I  +     V++A  L KE+   G +  N  Y  +I 
Sbjct: 541 E-TLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLIL 599

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           G  K  K+     +++ M +    P+   +S +++   D      AY  +++++E
Sbjct: 600 GHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLE 654



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 125/446 (28%), Positives = 217/446 (48%), Gaps = 8/446 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C   ++ DA KL   M+ RN +P+      LI G  +   ++ A  + + M  
Sbjct: 105 NVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKK 164

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF--DNGKF 238
               P  IT+N ++ GLCK  +I  A  +L+E+  +G  PD  TY+ I   +   D+G  
Sbjct: 165 EKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGA- 223

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+  +++ + KG      T +IL+  +CK+  + +A EVL  +   G  P  V YN++
Sbjct: 224 GAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTI 283

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  C+ G  D A+L I  + SRG+ PN I +N+++         D  ++ +  M     
Sbjct: 284 VNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGI 343

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P+V TYNILI+G  +  +  R      +M     +P++++Y +++  LCK+G + EA  
Sbjct: 344 APSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEM 403

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  + G    P    YN LIDG    G + +A+  + +M +NGI    +T+ +LI G C
Sbjct: 404 VLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLC 463

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +++EA ++   I   G+      Y  +I G   +      +++ E M     KP   
Sbjct: 464 KMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTIN 523

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            F  ++      G ++E  KL + L 
Sbjct: 524 TFHPLI-----SGCSKEGIKLKETLF 544



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 215/434 (49%), Gaps = 1/434 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G L  A +L + M RR  +P+      LI GL +  RI  A K+   M +   VP+ +T+
Sbjct: 80  GDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLVPNRVTF 139

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N ++ G CK G++  AI L + M     EP +IT+N++L  +    + ++A     +   
Sbjct: 140 NTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEIKC 199

Query: 251 KGCPPYLITYTILIEQVCKQC-GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            G  P   TY+I+ + + K   G   A+++  +   +G   D  T + L+N  CK+GK +
Sbjct: 200 NGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGKVE 259

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A  V+ +L+  G+ P  + YNT+++     G  D     ++ M      P    +N +I
Sbjct: 260 KAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVI 319

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +  C+  ++D+A     +MV K   P + TYN ++    +  + +   Q+L  +  +   
Sbjct: 320 DKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEK 379

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P +I+Y +LI+ L K G + +A ++   M+  G+ P+   +  LI G C   ++ EA+  
Sbjct: 380 PNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRF 439

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             E+ K G       Y  +I GLCK  K+  A ++  L+ S+ + PD   +++++   ++
Sbjct: 440 FDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSN 499

Query: 550 DGMTEEAYKLWQKL 563
            G +++  +L++ +
Sbjct: 500 AGNSQKCLELYETM 513



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 217/451 (48%), Gaps = 2/451 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++  A  L + M +    P      +L+ GL +  RIE+A  +L  +
Sbjct: 138 TFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCMLNEI 197

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQ-IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
             +G VPD  TY+++  GL K      +A+ L  E    G + D  T + +L  +   GK
Sbjct: 198 KCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLCKEGK 257

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A    K  +  G  P  + Y  ++   C+   + RAI  ++ M   G  P+ + +NS
Sbjct: 258 VEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNS 317

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++  C+    D A   +  ++ +G+ P+  TYN L+   G    +    +IL+ M E  
Sbjct: 318 VIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENG 377

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V +Y  LIN LCK G +  A      MV +   P+   YN ++   C  G L EAL
Sbjct: 378 EKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREAL 437

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +    ++ +     ++TYN+LI GL K G +++A  ++  +   G  PD IT+ +LI G+
Sbjct: 438 RFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGY 497

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
             A   ++ ++L + + K G K   + +  +I G C  + + +   +   M+     PD 
Sbjct: 498 SNAGNSQKCLELYETMKKLGLKPTINTFHPLISG-CSKEGIKLKETLFNEMLQMNLSPDR 556

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            V++ ++    + G  ++A+ L +++++  V
Sbjct: 557 VVYNAMIHCYQETGHVQKAFSLQKEMVDMGV 587



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 111/475 (23%), Positives = 220/475 (46%), Gaps = 37/475 (7%)

Query: 123 ILQNFCSRGKL-TDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +L + CS  K+ +  S+L D M +  ++P F +   ++  L+   + +    + + MV  
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  PD + Y   +    K G ++ A+ L + M      P+V  YN ++  +    + + A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              + +   +   P  +T+  LI+  CK   +  AI + + M  E   P I+T+NSL++ 
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSG 180

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITY------------------------------- 330
            CK  + ++A  ++N +   G  P+  TY                               
Sbjct: 181 LCKARRIEEARCMLNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKI 240

Query: 331 -----NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
                + LL+ L   G  +  +++L  + E    P    YN ++NG C+ G +DRAI + 
Sbjct: 241 DNYTCSILLNGLCKEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTI 300

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            QM S+  +P+ + +N+V+   C+  M+++A + +  + G   +P + TYN LIDG  + 
Sbjct: 301 EQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRL 360

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
               +   +  +M ENG  P+ I++ +LI   C+  ++ EA  +L+++  RG     + Y
Sbjct: 361 CVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMVGRGVLPNANIY 420

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            ++I G C   K+  A++  + M  +        +++++K +   G  +EA +++
Sbjct: 421 NMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMF 475



 Score =  148 bits (374), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 99/396 (25%), Positives = 191/396 (48%), Gaps = 1/396 (0%)

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           + S++   M   G +P      M+V  L +  +  + + L  EM   G  PD + Y   +
Sbjct: 14  QVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGLGFRPDKLVYGRAM 73

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                 G  K A+  ++   R+   P +  Y +LI  +CK+  I  A ++  +M++    
Sbjct: 74  LAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDAEKLFGEMSVRNLV 133

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P+ VT+N+L++  CK G+ D A+ +   +    +EP+ IT+N+LL  L      +    +
Sbjct: 134 PNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKVEPSIITFNSLLSGLCKARRIEEARCM 193

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYG-LVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           L+ +      P  FTY+I+ +GL K       A++ + + + K  + D  T + +L  LC
Sbjct: 194 LNEIKCNGFVPDGFTYSIIFDGLLKSDDGAGAALDLYREAIGKGVKIDNYTCSILLNGLC 253

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           KEG + +A ++L  L      P  + YNT+++G  + G M++A++   QM   G+ P+ I
Sbjct: 254 KEGKVEKAEEVLKSLVEHGLVPGEVIYNTIVNGYCQIGDMDRAILTIEQMESRGLRPNCI 313

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
              ++I  FC    +++A + +K++  +G       Y ++I G  +        Q+LE M
Sbjct: 314 AFNSVIDKFCEMQMIDKAEEWVKKMVGKGIAPSVETYNILIDGYGRLCVFSRCFQILEEM 373

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             +  KP+   + +++  +  DG   EA  + + ++
Sbjct: 374 EENGEKPNVISYGSLINCLCKDGKILEAEMVLRDMV 409



 Score =  141 bits (356), Expect = 7e-31,   Method: Compositional matrix adjust.
 Identities = 108/411 (26%), Positives = 182/411 (44%), Gaps = 34/411 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+  +C  G +  A   I+ M  R   P+     ++I     +  I+KA + ++ MV 
Sbjct: 281 NTIVNGYCQIGDMDRAILTIEQMESRGLRPNCIAFNSVIDKFCEMQMIDKAEEWVKKMVG 340

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P   TYN+++ G  +         +L+EM  +G +P+VI+Y +++  +  +GK  +
Sbjct: 341 KGIAPSVETYNILIDGYGRLCVFSRCFQILEEMEENGEKPNVISYGSLINCLCKDGKILE 400

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    +D + +G  P    Y +LI+  C    +  A+   D+M+  G    IVTYNSL+ 
Sbjct: 401 AEMVLRDMVGRGVLPNANIYNMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIK 460

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK GK  +A  +   + S G  P+ ITYN+L+    + G      ++ + M +    P
Sbjct: 461 GLCKMGKLKEAEEMFFLITSTGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKP 520

Query: 361 TVFTYNILINGLCKYGL----------------------------------VDRAINSFN 386
           T+ T++ LI+G  K G+                                  V +A +   
Sbjct: 521 TINTFHPLISGCSKEGIKLKETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQK 580

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +MV    +PD  TYN+++    KEG L+E   L+  +      P   TY+ LI G     
Sbjct: 581 EMVDMGVRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLK 640

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
               A V Y +M+ENG  P+      L  G  +  +++EA  +  E+   G
Sbjct: 641 DFNGAYVWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691



 Score = 66.2 bits (160), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 55/273 (20%), Positives = 107/273 (39%), Gaps = 69/273 (25%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C+ GKL +A +  D M++           +LI+GL ++ ++++A ++  ++  
Sbjct: 421 NMLIDGSCTVGKLREALRFFDEMSKNGIGATIVTYNSLIKGLCKMGKLKEAEEMFFLITS 480

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS--------------VSGCE------- 219
           +G  PD ITYN ++ G    G  +  + L + M               +SGC        
Sbjct: 481 TGHCPDVITYNSLISGYSNAGNSQKCLELYETMKKLGLKPTINTFHPLISGCSKEGIKLK 540

Query: 220 -------------PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
                        PD + YN ++    + G  ++A    K+ +  G  P   TY  LI  
Sbjct: 541 ETLFNEMLQMNLSPDRVVYNAMIHCYQETGHVQKAFSLQKEMVDMGVRPDNKTYNSLILG 600

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC----------------------- 303
             K+  ++   +++DDM  +G  P+  TY+ L+   C                       
Sbjct: 601 HLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAYVWYREMLENGFLPN 660

Query: 304 ------------KQGKYDDAVLVINNLLSRGME 324
                       K G+  +A  + + +++ GM+
Sbjct: 661 VCICNELSTGLRKDGRLQEAQSICSEMIANGMD 693



 Score = 43.1 bits (100), Expect = 0.38,   Method: Compositional matrix adjust.
 Identities = 32/167 (19%), Positives = 74/167 (44%), Gaps = 1/167 (0%)

Query: 403 VLGALCKEG-MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           +L ++C E  M ++  +L   +      P       +++ L +    +  + L+ +M+  
Sbjct: 1   MLLSVCSESKMHSQVSELYDFMRQEGRLPSFGYVRMIVESLVESKKFDNVLDLFKEMVGL 60

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G  PD + +   +    +   ++ A++L + + +R        Y ++I GLCK K++  A
Sbjct: 61  GFRPDKLVYGRAMLAAVKLGDLKLAMELFETMKRRKVVPNVFVYNVLIGGLCKEKRIRDA 120

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            ++   M      P+   F+T++      G  + A  L +++ + KV
Sbjct: 121 EKLFGEMSVRNLVPNRVTFNTLIDGYCKAGEVDVAIGLRERMKKEKV 167



 Score = 41.2 bits (95), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 29/105 (27%), Positives = 50/105 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D KT N ++      GKL++   L+D M  +  IP+      LI+G   +     A 
Sbjct: 587 VRPDNKTYNSLILGHLKEGKLSETKDLVDDMKAKGLIPEADTYSLLIQGHCDLKDFNGAY 646

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
              + M+ +G +P+    N +  GL K G+++ A ++  EM  +G
Sbjct: 647 VWYREMLENGFLPNVCICNELSTGLRKDGRLQEAQSICSEMIANG 691


>gi|222628658|gb|EEE60790.1| hypothetical protein OsJ_14375 [Oryza sativa Japonica Group]
          Length = 754

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 121/454 (26%), Positives = 232/454 (51%), Gaps = 1/454 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N ++  F   G++  A  L   M  +  +P+     +LI GL +   ++KA +VL
Sbjct: 152 DVFSYNALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVL 211

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV +G  P+ +TYN ++ G    G  + ++ +  EMS S   PDV   N+ +  +  +
Sbjct: 212 RQMVGAGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKH 271

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K+A   +   + KG  P +I+Y  L+        IA    + + M  EG  PD   +
Sbjct: 272 GRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVF 331

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N   + G  D ++L+  ++  +G+ P+ IT++T++ +    G  D   +  + M +
Sbjct: 332 NTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMID 391

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT-VLGALCKEGMLN 414
               P    Y+ LI G C    + +A    + M+SK   P  + + T ++  LCKEG + 
Sbjct: 392 TGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVA 451

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           E   ++ L+  +   P LIT+N+L+DG    G M++A+ L   M   G+ PD  T+ TL+
Sbjct: 452 EGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLV 511

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C+  ++++A+ L +++  +   + + +Y +++HGL ++++  +A ++   MI S   
Sbjct: 512 DGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMA 571

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
                ++T++  +  +  T+EA  L +KL    V
Sbjct: 572 VSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNV 605



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 211/455 (46%), Gaps = 1/455 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  +   C  G++ +A  + D M  +   PD      L+ G      I     +  +MV 
Sbjct: 262 NSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVC 321

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G VPD   +N ++    + G +  ++ + ++M+  G  PD+IT++T++      G+   
Sbjct: 322 EGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDD 381

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD-IVTYNSLV 299
           A+  +   +  G PP    Y+ LI+  C +  + +A E++ DM  +G  P  I  + S++
Sbjct: 382 AMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSII 441

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  CK+G+  +   V++ ++  G  PN IT+N+L+      G       +LD M      
Sbjct: 442 NNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVE 501

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P ++TYN L++G CK+G +D A+  F  M+ K      V+YN +L  L +      A ++
Sbjct: 502 PDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEM 561

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            H +  S  +  + TY T++ GL +  C ++A +L  ++    +  D +T   +I    +
Sbjct: 562 FHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFK 621

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             + +EA +L   I   G       YR++I  L K +  + A  +   M  S   PD  +
Sbjct: 622 VGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRI 681

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            + I++ + + G   +A     K+ +  +  + TT
Sbjct: 682 LNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATT 716



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 108/421 (25%), Positives = 202/421 (47%), Gaps = 10/421 (2%)

Query: 152 FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD 211
           ++  IN  R   R  R +    V   ++ +G  PD  +YN ++ G  K G++  A  L  
Sbjct: 121 YNILINCYR---RARRPDLGLPVFGRLLRTGLGPDVFSYNALIDGFSKEGEVDKAHDLFY 177

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           +M   G  P+V+TY++++  +    +  +A    +  +  G  P  +TY  LI       
Sbjct: 178 KMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAGVRPNNMTYNCLIHGYSTSG 237

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
               ++ V  +M+     PD+   NS +   CK G+  +A  + ++++ +G +P+ I+Y 
Sbjct: 238 MWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEARDIFDSMVLKGPKPDVISYG 297

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            LLH   + GC   +D + ++M      P    +N LIN   + G++D+++  F  M  +
Sbjct: 298 ALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQ 357

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              PDI+T++TV+ A C+ G L++A++  + +  +   P    Y+ LI G   +  + KA
Sbjct: 358 GVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKA 417

Query: 452 MVLYGQMMENGISPDDITHRT-LIWGFCRADQVEEA---VDLLKEIGKRGNKMRNSAYRL 507
             L   M+  GI P  I   T +I   C+  +V E    VDL+   G+R N +    +  
Sbjct: 418 KELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLI---TFNS 474

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           ++ G C    +  A+ +L+ M S   +PD   ++T+V      G  ++A  L++ ++  +
Sbjct: 475 LVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKR 534

Query: 568 V 568
           V
Sbjct: 535 V 535



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 94/355 (26%), Positives = 174/355 (49%), Gaps = 4/355 (1%)

Query: 206 AIALLDEMSVSGC---EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           A+ L   M    C    P + TYN ++       +    +  +   LR G  P + +Y  
Sbjct: 99  AVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSYNA 158

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI+   K+  + +A ++   M  +G  P++VTY+SL+N  CK  + D A  V+  ++  G
Sbjct: 159 LIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVGAG 218

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + PN++TYN L+H   + G W    ++   M+ +   P V   N  +  LCK+G +  A 
Sbjct: 219 VRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKEAR 278

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           + F+ MV K  +PD+++Y  +L      G +     L +++      P    +NTLI+  
Sbjct: 279 DIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAY 338

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
           A+ G M+K+++++  M + G++PD IT  T+I  FCR  ++++A++    +   G     
Sbjct: 339 ARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDT 398

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD-DTVFSTIVKKVADDGMTEEA 556
           + Y  +I G C  + +  A +++  M+S    P     F++I+  +  +G   E 
Sbjct: 399 AVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEG 453



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/441 (23%), Positives = 178/441 (40%), Gaps = 71/441 (16%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L  + + G +     L ++M     +PD H    LI    R+  ++K+  + + M   G
Sbjct: 299 LLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLINAYARLGMMDKSLLMFEDMTKQG 358

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD IT++ ++   C+ G++  A+   + M  +G  PD   Y+ +++   +     +A 
Sbjct: 359 VNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPPDTAVYSCLIQGQCNRRDLVKAK 418

Query: 243 GFWKDQLRKGCPP------------------------------------YLITYTILIEQ 266
               D L KG PP                                     LIT+  L++ 
Sbjct: 419 ELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEGKDVVDLIIHTGQRPNLITFNSLVDG 478

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
            C    +  A+ +LD M   G  PDI TYN+LV+  CK G+ DDA+ +  ++L + +   
Sbjct: 479 YCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDGYCKHGRIDDALTLFRDMLHKRVTLT 538

Query: 327 SITYNTLLHSLGS-----------------------------------RGCWDAVDKILD 351
           S++YN +LH L                                       C D  + +L+
Sbjct: 539 SVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVSIHTYATVLGGLCRNNCTDEANMLLE 598

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            +   +    + T+NI+I  + K G    A   F  + +    P I+TY  ++  L KE 
Sbjct: 599 KLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEE 658

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
              +A  L   +  SSC+P     N +I  L  KG + KA     ++ + GI P+  T  
Sbjct: 659 SFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTS 718

Query: 472 TLIWGFCRADQVEEAVDLLKE 492
            LI+ F    +  E + LL E
Sbjct: 719 LLIYLFSVNGKYREYIKLLPE 739



 Score =  131 bits (330), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 83/328 (25%), Positives = 160/328 (48%), Gaps = 1/328 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           V  D    + ++Q  C+R  L  A +LI D++++    P   F  ++I  L +  R+ + 
Sbjct: 394 VPPDTAVYSCLIQGQCNRRDLVKAKELISDMLSKGIPPPCIKFFTSIINNLCKEGRVAEG 453

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             V+ +++ +G  P+ IT+N +V G C  G ++ A+ LLD M   G EPD+ TYNT++  
Sbjct: 454 KDVVDLIIHTGQRPNLITFNSLVDGYCLVGNMKEAVGLLDSMESVGVEPDIYTYNTLVDG 513

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
              +G+   A+  ++D L K      ++Y I++  + +      A E+  +M   G +  
Sbjct: 514 YCKHGRIDDALTLFRDMLHKRVTLTSVSYNIILHGLFQARRTIVAKEMFHEMIESGMAVS 573

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           I TY +++   C+    D+A +++  L S  ++ + +T+N ++ ++   G      ++  
Sbjct: 574 IHTYATVLGGLCRNNCTDEANMLLEKLFSMNVKFDILTFNIVIRAMFKVGRRQEAKELFA 633

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            ++     PT+ TY ++I  L K    + A N F+ M   +C PD    N ++  L  +G
Sbjct: 634 AISTYGLVPTILTYRVMITNLIKEESFEDADNLFSSMEKSSCTPDSRILNEIIRMLLNKG 693

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLI 439
            + +A   L  ++     P   T + LI
Sbjct: 694 EVAKAGNYLSKIDKKGILPEATTTSLLI 721



 Score =  119 bits (298), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 82/310 (26%), Positives = 134/310 (43%), Gaps = 38/310 (12%)

Query: 274 ARAIEVLDDM---AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           A A+E+   M   A    +P I TYN L+N   +  + D  + V   LL  G+ P+  +Y
Sbjct: 97  ALAVELFKRMDRCACPEAAPTIYTYNILINCYRRARRPDLGLPVFGRLLRTGLGPDVFSY 156

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N L+      G  D    +   M E    P V TY+ LINGLCK   +D+A     QMV 
Sbjct: 157 NALIDGFSKEGEVDKAHDLFYKMEEQGIMPNVVTYSSLINGLCKTKEMDKAERVLRQMVG 216

Query: 391 KNCQPDIVTY-----------------------------------NTVLGALCKEGMLNE 415
              +P+ +TY                                   N+ + ALCK G + E
Sbjct: 217 AGVRPNNMTYNCLIHGYSTSGMWKESVRVFKEMSSSLLVPDVGNCNSFMTALCKHGRIKE 276

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  +   +      P +I+Y  L+ G A  GC+     L+  M+  G+ PD     TLI 
Sbjct: 277 ARDIFDSMVLKGPKPDVISYGALLHGYATAGCIAGMDNLFNVMVCEGVVPDRHVFNTLIN 336

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            + R   +++++ + +++ K+G       +  VI   C+  ++D A++    MI +   P
Sbjct: 337 AYARLGMMDKSLLMFEDMTKQGVNPDIITFSTVISAFCRLGRLDDAMEKFNHMIDTGVPP 396

Query: 536 DDTVFSTIVK 545
           D  V+S +++
Sbjct: 397 DTAVYSCLIQ 406



 Score = 43.1 bits (100), Expect = 0.45,   Method: Compositional matrix adjust.
 Identities = 30/138 (21%), Positives = 61/138 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N +++     G+  +A +L   ++    +P       +I  LI+ +  E A 
Sbjct: 605 VKFDILTFNIVIRAMFKVGRRQEAKELFAAISTYGLVPTILTYRVMITNLIKEESFEDAD 664

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M  S   PD+   N ++  L  +G++  A   L ++   G  P+  T + ++   
Sbjct: 665 NLFSSMEKSSCTPDSRILNEIIRMLLNKGEVAKAGNYLSKIDKKGILPEATTTSLLIYLF 724

Query: 233 FDNGKFKQAIGFWKDQLR 250
             NGK+++ I    ++ R
Sbjct: 725 SVNGKYREYIKLLPEKYR 742


>gi|358346655|ref|XP_003637381.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503316|gb|AES84519.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 1023

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/478 (26%), Positives = 233/478 (48%), Gaps = 31/478 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N ++  FC +G +     L+  M +R    D   C  L++G  RI  ++ A 
Sbjct: 158 VDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAE 217

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V+  +V  G   D I  N ++ G C+ G +  A  L++    S  + D++TYNT+L+  
Sbjct: 218 WVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAF 277

Query: 233 FDNGK-------FKQAIGFWKDQLR------------KGCPPYLITYTILIEQVCKQCGI 273
              G        F + +GFWKD+ R            K   P L+TYT LI   CK  G+
Sbjct: 278 CKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGV 337

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             +  +   M + G  PD+VT +S++   C+ GK  +A ++   +   G++PN ++Y T+
Sbjct: 338 EESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATI 397

Query: 334 LHSLGSRGCWDAVDKILDIMNEASH------SPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           ++SL   G      ++++  N  S       S  + T   +++GL K G    A   F  
Sbjct: 398 INSLFKSG------RVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFET 451

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           ++  N  P+ VTY+ +L   CK G +  A  +L  +      P +IT++++I+G AKKG 
Sbjct: 452 ILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGM 511

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           + KA+ +  +M++  + P+ I +  LI G+ +A + + A D  KE+  R  +  N  + +
Sbjct: 512 LSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDI 571

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +++ L +  ++D A  ++  M S    PD   +++++     +G    A  + Q++ E
Sbjct: 572 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKE 629



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 146/574 (25%), Positives = 251/574 (43%), Gaps = 67/574 (11%)

Query: 55  SLKCRGLPGNVCIDRVNEVDQDEWSSESHV-LAVNKKLRGL-TITKKSHDPSLPSSDGPF 112
           S+ C  L    C  R+  V   EW   + V   V K + GL T+     +  L S     
Sbjct: 197 SITCNILVKGYC--RIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAGLMSQATEL 254

Query: 113 VEN--------DEKTNNKILQNFCSRGKLTDASKLI----------------DIMAR--- 145
           +EN        D  T N +L+ FC  G LT A  L                 D++ +   
Sbjct: 255 IENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEI 314

Query: 146 RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRS 205
           +N  P       LI    +   +E++  + + M+M+G +PD +T + ++ G C+ G++  
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC------------ 253
           A  L  EM   G +P+ ++Y TI+ ++F +G+  +A       + +G             
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 254 -----------------------PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                                   P  +TY+ L++  CK   +  A  VL  M  E   P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           +++T++S++N   K+G    AV V+  ++ R + PN+I Y  L+      G  D  D   
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 554

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M       +   ++IL+N L + G +D A +    M SK   PDIV Y +++    KE
Sbjct: 555 KEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKE 614

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G    AL ++  +   +    ++ YN LI GL + G  +   V   +M+E G++PD IT+
Sbjct: 615 GNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVC-SRMIELGLAPDCITY 673

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            T+I  +C   + E+A+D+L E+   G       Y ++I GLCK+  V+ A   L+ M+ 
Sbjct: 674 NTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLV 733

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             + P       +VK  +     ++  ++ +KL+
Sbjct: 734 MEFVPTPITHKFLVKAYSRSEKADKILQIHEKLV 767



 Score =  178 bits (452), Expect = 7e-42,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 225/482 (46%), Gaps = 36/482 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C    + ++  L   M     +PD   C +++ G  R  ++ +A+ + + M
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM 382

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ ++Y  ++  L K G++  A  L  +M V G   D++T  T++  +F  GK 
Sbjct: 383 YEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKT 442

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A   ++  L+    P  +TY+ L++  CK   +  A  VL  M  E   P+++T++S+
Sbjct: 443 KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSI 502

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   K+G    AV V+  ++ R + PN+I Y  L+      G  D  D     M     
Sbjct: 503 INGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRL 562

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
             +   ++IL+N L + G +D A +    M SK   PDIV Y +++    KEG    AL 
Sbjct: 563 EESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALS 622

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  +   +    ++ YN LI GL + G  +   V   +M+E G++PD IT+ T+I  +C
Sbjct: 623 IVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVC-SRMIELGLAPDCITYNTIINTYC 681

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK------------------------ 514
              + E+A+D+L E+   G       Y ++I GLCK                        
Sbjct: 682 IKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPI 741

Query: 515 -----------SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                      S+K D  +Q+ E +++S  +   TV++T++      GMT +A  +  ++
Sbjct: 742 THKFLVKAYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEM 801

Query: 564 IE 565
           ++
Sbjct: 802 VK 803



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 216/484 (44%), Gaps = 38/484 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +L  +C  GK+  A  ++  M + +  P+     ++I G  +   + KA  VL+ M
Sbjct: 463 TYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V    +P+TI Y +++ G  K G+   A     EM     E   + ++ +L  +   G+ 
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 582

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA-------------- 284
            +A     D   KG  P ++ Y  LI+   K+     A+ ++ +M               
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642

Query: 285 -------------------IE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
                              IE G +PD +TYN+++N  C +GK +DA+ ++N + S G+ 
Sbjct: 643 IKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALDILNEMKSYGIM 702

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN++TYN L+  L   G  +  +  LD M      PT  T+  L+    +    D+ +  
Sbjct: 703 PNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVKAYSRSEKADKILQI 762

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             ++V+   +  +  YNT++   C+ GM  +A  +L  +     S  L+TYN LI G   
Sbjct: 763 HEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISADLVTYNALIRGYCT 822

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD----QVEEAVDLLKEIGKRGNKM 500
              +EKA+  Y QM  +GI+P+  T+ TL+ G   A      +EE   L+ E+ +RG   
Sbjct: 823 GSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLVSEMNERGLVP 882

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
             + Y +++ G  +       I +   MI+  + P    ++ ++   A  G   EA +L 
Sbjct: 883 NAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISDYAKSGKMIEARELL 942

Query: 561 QKLI 564
             L+
Sbjct: 943 NDLL 946



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 117/465 (25%), Positives = 213/465 (45%), Gaps = 21/465 (4%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ + +  + + AS     M     +P   F   L+        + +   +   M+  G
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD  + N++V  LCK G +  A+  L    V   + D +TYNT++      G   Q  
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDV--VDIDNVTYNTVIWGFCQKGLVDQGF 182

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G   + +++G     IT  IL++  C+   +  A  V+ ++   G + D++  N+L++  
Sbjct: 183 GLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGY 242

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR--------------GCWDAVDK 348
           C+ G    A  +I N     ++ + +TYNTLL +                  G W   D+
Sbjct: 243 CEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDR 302

Query: 349 ILD----IMNEASH-SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           + +      NE  +  PT+ TY  LI   CK+  V+ + + + +M+     PD+VT +++
Sbjct: 303 LKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSI 362

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           L   C+ G L EA  L   +      P  ++Y T+I+ L K G + +A  L  QM+  GI
Sbjct: 363 LYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGI 422

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           S D +T  T++ G  +  + +EA ++ + I K         Y  ++ G CK  K+++A  
Sbjct: 423 SFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAEL 482

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           VL+ M      P+   FS+I+   A  GM  +A  + +++++  V
Sbjct: 483 VLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNV 527



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 119/436 (27%), Positives = 184/436 (42%), Gaps = 58/436 (13%)

Query: 123  ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            +L N    G++ +A  LI  M  +   PD     +LI G  +      A  ++Q M    
Sbjct: 572  LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKN 631

Query: 183  GVPDTITYNMMVGGLCKRGQI--RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               D + YN ++ GL + G+   R   + + E+   G  PD ITYNTI+ T    GK + 
Sbjct: 632  IRFDVVAYNALIKGLLRLGKYDPRYVCSRMIEL---GLAPDCITYNTIINTYCIKGKTED 688

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A+    +    G  P  +TY ILI  +CK   + +A   LD+M +    P  +T+  LV 
Sbjct: 689  ALDILNEMKSYGIMPNAVTYNILIGGLCKTGAVEKAESALDEMLVMEFVPTPITHKFLVK 748

Query: 301  FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +  K D  + +   L++ G+E +   YNTL+      G       +LD M +   S 
Sbjct: 749  AYSRSEKADKILQIHEKLVASGLELSLTVYNTLITVFCRLGMTRKAKVVLDEMVKRGISA 808

Query: 361  TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM-------- 412
             + TYN LI G C    V++A+ +++QM      P+I TYNT+LG L   G+        
Sbjct: 809  DLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMMEET 868

Query: 413  ------LNE------------------------ALQLLHL-LNGSSCSPCLITYNTLIDG 441
                  +NE                           +LH+ +      P L TYN LI  
Sbjct: 869  EKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVLISD 928

Query: 442  LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC-------------RADQVEEAVD 488
             AK G M +A  L   ++  G  P+  T+  L  G+              R+ ++ E   
Sbjct: 929  YAKSGKMIEARELLNDLLTKGRIPNSFTYDILTCGWLNLSYEPEIDRSLKRSYEI-EVKK 987

Query: 489  LLKEIGKRGNKMRNSA 504
            LL E+G++G K    A
Sbjct: 988  LLIEMGRKGLKFSKKA 1003



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 84/342 (24%), Positives = 145/342 (42%), Gaps = 38/342 (11%)

Query: 254 PP-----YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           PP     Y+  +  LI         + A      M   G  P +  +N+L+      G  
Sbjct: 51  PPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLV 110

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV------DKILDIMNEASHSPTV 362
               L+ +++L  G+ P+  + N L+HSL   G  D        + ++DI N        
Sbjct: 111 SQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDN-------- 162

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN +I G C+ GLVD+     ++MV +    D +T N ++   C+ G++  A  +++ 
Sbjct: 163 VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYN 222

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L     +  +I  NTLIDG  + G M +A  L      + +  D +T+ TL+  FC+   
Sbjct: 223 LVDGGVTKDVIGLNTLIDGYCEAGLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGD 282

Query: 483 VEEAVDLLKEI---GKRGNKMRNS----------------AYRLVIHGLCKSKKVDMAIQ 523
           +  A  L  EI    K  ++++N+                 Y  +I   CK   V+ +  
Sbjct: 283 LTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHS 342

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + + MI +   PD    S+I+      G   EA  L++++ E
Sbjct: 343 LYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYE 384



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 43/155 (27%), Positives = 69/155 (44%), Gaps = 4/155 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGL----IRIDRI 168
           +  D  T N +++ +C+   +  A K    M      P+      L+ GL    +  + +
Sbjct: 806 ISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGGLSNAGLMEEMM 865

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E+  K++  M   G VP+  TY+++V G  + G  +  I L  EM   G  P + TYN +
Sbjct: 866 EETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKGFVPTLKTYNVL 925

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
           +     +GK  +A     D L KG  P   TY IL
Sbjct: 926 ISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 960


>gi|359473521|ref|XP_002273398.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Vitis vinifera]
          Length = 755

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 111/398 (27%), Positives = 200/398 (50%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +E A  +   M  +G  PD +TYN ++ G  K G +   I + ++M  + C+PDVITYN 
Sbjct: 271 LEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNA 330

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++       +  +A  F  +    G  P ++TY+  I+  CK+  +  AI+   DM    
Sbjct: 331 LINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVA 390

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
            +P+  TY SL++ +CK G   +A+ ++  +L  G++ N +TY  LL  L   G     +
Sbjct: 391 LTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAE 450

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M  A  +P   TY  L++G  K   ++ A +   +M  K  +PD++ Y T+L  L
Sbjct: 451 EVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGL 510

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C E  L EA  L+  +  S  +   + Y TL+D   K G   +A+ L  +M++ G+   +
Sbjct: 511 CNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATE 570

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+  LI G C++  V+EA+     + + G +   + Y  ++ GLCK+   ++A ++ + 
Sbjct: 571 VTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDE 630

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           M+     PD   ++ ++      G  +EA  L  ++IE
Sbjct: 631 MLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIE 668



 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 130/480 (27%), Positives = 219/480 (45%), Gaps = 35/480 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G L  A  L   M      PD     +LI G  ++  +++   + + M
Sbjct: 257 TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 316

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +   PD ITYN ++   CK  ++  A   L EM  +G +P+V+TY+T +      G  
Sbjct: 317 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 376

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++AI F+ D  R    P   TYT LI+  CK   +A A+++++++   G   ++VTY +L
Sbjct: 377 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 436

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C++G+  +A  V   +L+ G+ PN  TY  L+H        +    IL  M E   
Sbjct: 437 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 496

Query: 359 SPTVFTYNILINGLC-----------------------------------KYGLVDRAIN 383
            P +  Y  ++ GLC                                   K G    A+ 
Sbjct: 497 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 556

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              +M+        VTY  ++  LCK G++ EA+     ++     P +  Y  L+DGL 
Sbjct: 557 LLEEMLDLGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLC 616

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K  C E A  L+ +M++ G+ PD I +  LI G  +   ++EA++L   + + G ++   
Sbjct: 617 KNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLH 676

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           AY  +I GL  S +V  A  +L+ MI     PD+ V+  ++KK    G  +EA +L  ++
Sbjct: 677 AYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEM 736



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 206/447 (46%), Gaps = 2/447 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIM-ARRNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           N +L+      ++  +  + D++ A RN  +P F     L   LI +  +E+AS+    M
Sbjct: 152 NAVLKELICLRRVLPSWDVFDLLWATRNVCVPGFGVFDALFSALIELGMLEEASECFLKM 211

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P   + N ++  L K G+   +     +M  +G +  V TYN ++  +   G  
Sbjct: 212 RKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYNIMIDYLCKEGDL 271

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A   +      G  P ++TY  LI+   K   +   I + + M    C PD++TYN+L
Sbjct: 272 EMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDADCDPDVITYNAL 331

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK  +   A   ++ + + G++PN +TY+T + +    G      K    M   + 
Sbjct: 332 INCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDMRRVAL 391

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P  FTY  LI+  CK G +  A+    +++    + ++VTY  +L  LC+EG + EA +
Sbjct: 392 TPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEE 451

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +  +  +P   TY  L+ G  K   ME A  +  +M E  I PD + + T++WG C
Sbjct: 452 VFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLC 511

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              ++EEA  L+ EI + G       Y  ++    KS +   A+ +LE M+       + 
Sbjct: 512 NESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEV 571

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +  ++  +   G+ +EA   + ++ E
Sbjct: 572 TYCALIDGLCKSGLVQEAMHHFGRMSE 598



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 185/417 (44%), Gaps = 35/417 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  FC   ++  A + +  M      P+       I    +   +++A K  
Sbjct: 324 DVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFF 383

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M      P+  TY  ++   CK G +  A+ L++E+  +G + +V+TY  +L  + + 
Sbjct: 384 VDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEE 443

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ K+A   ++  L  G  P   TYT L+    K   +  A ++L +M  +   PD++ Y
Sbjct: 444 GRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLY 503

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +++   C + + ++A L+I  +   G+  N++ Y TL+ +    G       +L+ M +
Sbjct: 504 GTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLD 563

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                T  TY  LI+GLCK GLV  A++ F +M     QP++  Y  ++  LCK      
Sbjct: 564 LGLIATEVTYCALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEV 623

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME--------------- 460
           A +L   +      P  I Y  LIDG  K G +++A+ L  +M+E               
Sbjct: 624 AKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIW 683

Query: 461 --------------------NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
                                G+ PD++ +  LI  +    +V+EA++L  E+ KRG
Sbjct: 684 GLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRG 740



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 87/348 (25%), Positives = 160/348 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T   ++   C  G L +A KL++ + +     +      L+ GL    R+++A +V 
Sbjct: 394 NEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRMKEAEEVF 453

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+ +G  P+  TY  +V G  K  ++  A  +L EM     +PD++ Y TIL  + + 
Sbjct: 454 RAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTILWGLCNE 513

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + ++A     +    G     + YT L++   K      A+ +L++M   G     VTY
Sbjct: 514 SRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLGLIATEVTY 573

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++  CK G   +A+     +   G++PN   Y  L+  L    C++   K+ D M +
Sbjct: 574 CALIDGLCKSGLVQEAMHHFGRMSEIGLQPNVAVYTALVDGLCKNNCFEVAKKLFDEMLD 633

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    Y  LI+G  K+G +  A+N  ++M+    + D+  Y  ++  L   G + +
Sbjct: 634 KGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQK 693

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           A  LL  + G    P  + Y  LI      G +++A+ L  +M + G+
Sbjct: 694 ARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQNEMAKRGM 741


>gi|225430498|ref|XP_002283327.1| PREDICTED: pentatricopeptide repeat-containing protein At4g31850,
           chloroplastic [Vitis vinifera]
 gi|296082142|emb|CBI21147.3| unnamed protein product [Vitis vinifera]
          Length = 1113

 Score =  197 bits (502), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/461 (27%), Positives = 224/461 (48%), Gaps = 39/461 (8%)

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK 199
           ++ +  R  I  F  CI   R L R  +I++A  +L+ M  +G  PD +TY +++  LC 
Sbjct: 253 MESLGLRPNIYTFTICI---RILGRAGKIDEAYGILKRMDDAGCGPDVVTYTVLIDALCN 309

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
            G++ +A  L  +M  S  +PD +TY T+L    D+G       FW +    G  P ++T
Sbjct: 310 AGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFWSEMEADGYLPDVVT 369

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           +TILI+ +CK   +  A   LD M  +G +P++ TYN+L+    +  + D+A+ + N++ 
Sbjct: 370 FTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRLNRLDEALELFNSME 429

Query: 320 SRGMEPNSITY-----------------------------------NTLLHSLGSRGCWD 344
           S G+E  + TY                                   N  L+SL  +G  +
Sbjct: 430 SLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLE 489

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
              +  + + +   +P   TYNIL+    K G VD AI   ++M    C P++V  N+++
Sbjct: 490 EAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLI 549

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             L K   ++EA ++   +     +P ++TYNTL+ GL K+G +++A  L+  M+ +   
Sbjct: 550 DTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCP 609

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           P+ I+  TL+   C+  +V+ A+ +L  + +         Y  VI+GL K  +V+ A  +
Sbjct: 610 PNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWL 669

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              M    Y PD     T++  V  DG  E+A+++ ++ + 
Sbjct: 670 FHQMKKVIY-PDYVTLCTLLPGVIKDGRIEDAFRVAKEFVH 709



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 129/483 (26%), Positives = 213/483 (44%), Gaps = 35/483 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C+ GKL +A +L   M   +  PD    I L+        ++   +  
Sbjct: 296 DVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIKEFW 355

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G +PD +T+ +++  LCK G++  A   LD M   G  P++ TYNT++  +   
Sbjct: 356 SEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGLLRL 415

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A+  +      G      TY + I+   K     +AI+  + M   G  P+IV  
Sbjct: 416 NRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNIVAC 475

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+ +    +QG+ ++A    N L   G+ P++ITYN L+   G  G  D   K+L  M E
Sbjct: 476 NASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSEMEE 535

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V   N LI+ L K   VD A   F +M      P +VTYNT+L  L KEG + E
Sbjct: 536 NGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGKEGRVQE 595

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   +    C P  I++NTL+D L K G ++ A+ +  +M E    PD +T+ T+I+
Sbjct: 596 ATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCFPDVLTYNTVIY 655

Query: 476 GFCRADQVEEAVDLLKEIGK-----------------------------------RGNKM 500
           G  + ++V  A  L  ++ K                                    G+  
Sbjct: 656 GLIKENRVNYAFWLFHQMKKVIYPDYVTLCTLLPGVIKDGRIEDAFRVAKEFVHHVGDHA 715

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
             S +  ++ G+    ++  +I   E ++ +    DD+V   +VK +   G   +AY ++
Sbjct: 716 DGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLIPLVKFLCKHGKAVDAYNVF 775

Query: 561 QKL 563
            KL
Sbjct: 776 LKL 778



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 129/475 (27%), Positives = 219/475 (46%), Gaps = 35/475 (7%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
           RG L +A   ++ M +   + + +  I LI  L++     +A KV + MV  G  P   T
Sbjct: 170 RGGLREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKT 229

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y+ ++  L KR  I + + LL EM   G  P++ T+   +R +   GK  +A G  K   
Sbjct: 230 YSALMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMD 289

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVL----------------------------- 280
             GC P ++TYT+LI+ +C    +  A E+                              
Sbjct: 290 DAGCGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLD 349

Query: 281 ------DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
                  +M  +G  PD+VT+  L++  CK GK D+A   ++ +  +G+ PN  TYNTL+
Sbjct: 350 AIKEFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLI 409

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
             L      D   ++ + M       T +TY + I+   K G   +AI +F +M +    
Sbjct: 410 CGLLRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIV 469

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+IV  N  L +L ++G L EA +  + L     +P  ITYN L+    K G ++ A+ L
Sbjct: 470 PNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKL 529

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             +M ENG  P+ +   +LI    +AD+V+EA  + + + +         Y  ++ GL K
Sbjct: 530 LSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKLAPTVVTYNTLLAGLGK 589

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             +V  A  + + MI+    P+   F+T++  +  +G  + A K+  ++ E   F
Sbjct: 590 EGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDLALKMLFRMTEMNCF 644



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/461 (24%), Positives = 218/461 (47%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           ++ P V +  +T N +L+   +  ++ D   + ++M ++      +  + + + L     
Sbjct: 113 AEMPRVIHTTETCNYVLEMLRAHRRVEDMVVVFNLMQKQIIKRSINTYLTIFKVLYIRGG 172

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +A   L+ M   G V +  +Y  ++  L K G  R A+ +   M   G +P + TY+ 
Sbjct: 173 LREAPVALEKMRKVGFVLNGYSYIGLIHLLLKSGFCREALKVYRRMVSEGIKPSLKTYSA 232

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +      +  +G  ++    G  P + T+TI I  + +   I  A  +L  M   G
Sbjct: 233 LMVALGKRRDIETVMGLLQEMESLGLRPNIYTFTICIRILGRAGKIDEAYGILKRMDDAG 292

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           C PD+VTY  L++  C  GK ++A  +   + +   +P+ +TY TLL      G  DA+ 
Sbjct: 293 CGPDVVTYTVLIDALCNAGKLNNAKELFLKMKASSHKPDRVTYITLLDKFSDHGDLDAIK 352

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +    M    + P V T+ ILI+ LCK G VD A  + + M  +   P++ TYNT++  L
Sbjct: 353 EFWSEMEADGYLPDVVTFTILIDALCKVGKVDEAFGTLDVMKKQGVAPNLHTYNTLICGL 412

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +   L+EAL+L + +          TY   ID   K G   KA+  + +M  NGI P+ 
Sbjct: 413 LRLNRLDEALELFNSMESLGLETTAYTYILFIDYYGKSGESGKAIKTFEKMKTNGIVPNI 472

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +     ++      ++EEA +    + K G       Y +++    K+ +VD AI++L  
Sbjct: 473 VACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITYNILMRCYGKAGRVDDAIKLLSE 532

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           M  +   P+  + ++++  +      +EA+K++Q++ E K+
Sbjct: 533 MEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKEMKL 573



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/474 (24%), Positives = 213/474 (44%), Gaps = 40/474 (8%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G+   A K  + M     +P+   C   +  L    R+E+A +    +   G  PD ITY
Sbjct: 451 GESGKAIKTFEKMKTNGIVPNIVACNASLYSLAEQGRLEEAKEFFNGLKKCGLAPDAITY 510

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N+++    K G++  AI LL EM  +GC+P+V+  N+++ T++   +  +A   ++    
Sbjct: 511 NILMRCYGKAGRVDDAIKLLSEMEENGCDPEVVIINSLIDTLYKADRVDEAWKMFQRMKE 570

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
               P ++TY  L+  + K+  +  A  +   M  + C P+ +++N+L++  CK G+ D 
Sbjct: 571 MKLAPTVVTYNTLLAGLGKEGRVQEATALFKGMIADDCPPNTISFNTLLDCLCKNGEVDL 630

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ ++  +      P+ +TYNT+++ L      +    +   M +  + P   T   L+ 
Sbjct: 631 ALKMLFRMTEMNCFPDVLTYNTVIYGLIKENRVNYAFWLFHQMKKVIY-PDYVTLCTLLP 689

Query: 371 GLCKYGLVDRAINSFNQMV-------------------------------------SKNC 393
           G+ K G ++ A     + V                                     +  C
Sbjct: 690 GVIKDGRIEDAFRVAKEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTIC 749

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC-SPCLITYNTLIDGLAKKGCMEKAM 452
           + D V    V   LCK G   +A  +   L  S C +P L  YN+LIDGL K    E A 
Sbjct: 750 EDDSVLIPLV-KFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAW 808

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L+ +M   G +PD  T+   +    ++ +++E  DL +E+  RG K     + +VI GL
Sbjct: 809 GLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGL 868

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            KS  +D AI +   ++S  + P    +  ++  +   G  EEA + +++++++
Sbjct: 869 VKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDY 922



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 97/352 (27%), Positives = 169/352 (48%), Gaps = 1/352 (0%)

Query: 193  MVGGLCKRGQIRSAIALLDEMSVSGC-EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            +V  LCK G+   A  +  +++ S C  P +  YN+++  +      + A G +      
Sbjct: 758  LVKFLCKHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNA 817

Query: 252  GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
            GC P + TY + ++ + K   I    ++ ++M   GC P+ +T+N ++    K    D A
Sbjct: 818  GCTPDVFTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKA 877

Query: 312  VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
            + +  +L+S    P   TY  L+  L   G  +   +  + M +    P    YNIL+NG
Sbjct: 878  IDLYYDLMSGDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNG 937

Query: 372  LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
              K G V+ A   F +MV +  +PD+ +Y+ ++  LC  G +++AL     L  S   P 
Sbjct: 938  FGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPD 997

Query: 432  LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
            L+ YN +I+GL +   +E+A+ L+ +M   GI+PD  T+  LI     A  VEEA  + +
Sbjct: 998  LVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYE 1057

Query: 492  EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            E+  +G +     Y  +I G   S   D A  V + M+    +P+   F+ +
Sbjct: 1058 ELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score =  155 bits (391), Expect = 7e-35,   Method: Compositional matrix adjust.
 Identities = 91/309 (29%), Positives = 153/309 (49%)

Query: 185  PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
            P    YN ++ GL K      A  L  +M  +GC PDV TYN  L  +  +GK K+    
Sbjct: 786  PSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDVFTYNLFLDALGKSGKIKELFDL 845

Query: 245  WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            +++ L +GC P  IT+ I+I  + K   + +AI++  D+     SP   TY  L++   K
Sbjct: 846  YEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYDLMSGDFSPTPWTYGPLIDGLLK 905

Query: 305  QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             G+ ++A      +L  G  PN   YN L++  G +G  +   ++   M +    P + +
Sbjct: 906  LGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEGIRPDLKS 965

Query: 365  YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
            Y+I+++ LC  G VD A++ F ++      PD+V YN ++  L +   + EAL L   + 
Sbjct: 966  YSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMR 1025

Query: 425  GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                +P L TYN LI  L   G +E+A  +Y ++   G+ P+  T+  LI G   +   +
Sbjct: 1026 NRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPD 1085

Query: 485  EAVDLLKEI 493
             A  + K++
Sbjct: 1086 RAYAVYKKM 1094



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 215/453 (47%), Gaps = 7/453 (1%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T N ++       ++  A  L   M ++   PD+     L+ G+I+  RIE A +V 
Sbjct: 646  DVLTYNTVIYGLIKENRVNYAFWLFHQM-KKVIYPDYVTLCTLLPGVIKDGRIEDAFRVA 704

Query: 176  QIMVMS-GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMF 233
            +  V   G   D   +  ++GG+    +I  +I   + +  +  CE D +    +++ + 
Sbjct: 705  KEFVHHVGDHADGSFWEDLMGGILIEAEIGQSILFAESLVCNTICEDDSVLI-PLVKFLC 763

Query: 234  DNGKFKQAIGFWKDQLRKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +GK   A   +    +  C  P L  Y  LI+ + K      A  +   M   GC+PD+
Sbjct: 764  KHGKAVDAYNVFLKLTKSFCITPSLEAYNSLIDGLLKARLTEMAWGLFYKMKNAGCTPDV 823

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILD 351
             TYN  ++   K GK  +   +   +L RG +PN+IT+N ++  L      D A+D   D
Sbjct: 824  FTYNLFLDALGKSGKIKELFDLYEEMLFRGCKPNTITHNIVIFGLVKSNSLDKAIDLYYD 883

Query: 352  IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            +M+    SPT +TY  LI+GL K G ++ A   F +M+   C P+   YN ++    K+G
Sbjct: 884  LMS-GDFSPTPWTYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQG 942

Query: 412  MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             +  A +L   +      P L +Y+ ++D L   G ++ A+  + ++  +G+ PD + + 
Sbjct: 943  DVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYN 1002

Query: 472  TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
             +I G  R+ +VEEA+ L  E+  RG       Y  +I  L  +  V+ A ++ E +   
Sbjct: 1003 LMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLK 1062

Query: 532  RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              +P+   ++ +++  +  G  + AY +++K++
Sbjct: 1063 GLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMM 1095



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 58/213 (27%), Positives = 106/213 (49%)

Query: 158  LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
            LI GL+++ R+E+A +  + M+  G +P+   YN+++ G  K+G + +A  L   M   G
Sbjct: 899  LIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRMVKEG 958

Query: 218  CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              PD+ +Y+ ++  +   GK   A+ ++++    G  P L+ Y ++I  + +   +  A+
Sbjct: 959  IRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRVEEAL 1018

Query: 278  EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
             + D+M   G +PD+ TYN+L+      G  ++A  +   L  +G+EPN  TYN L+   
Sbjct: 1019 SLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRGH 1078

Query: 338  GSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
               G  D    +   M      P   T+  L N
Sbjct: 1079 SMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 53/215 (24%), Positives = 107/215 (49%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T   ++      G+L +A +  + M     +P+      L+ G  +   +E A ++ + M
Sbjct: 895  TYGPLIDGLLKLGRLEEAKQFFEEMLDYGCMPNCPLYNILMNGFGKQGDVETACELFRRM 954

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            V  G  PD  +Y++MV  LC  G++  A+   +E+ +SG +PD++ YN ++  +  + + 
Sbjct: 955  VKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDLVCYNLMINGLGRSQRV 1014

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            ++A+  + +   +G  P L TY  LI  +     +  A ++ +++ ++G  P++ TYN+L
Sbjct: 1015 EEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNAL 1074

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            +      G  D A  V   ++  G  PN+ T+  L
Sbjct: 1075 IRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQL 1109



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/182 (27%), Positives = 86/182 (47%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++  F  +G +  A +L   M +    PD      ++  L  + +++ A    + + +
Sbjct: 932  NILMNGFGKQGDVETACELFRRMVKEGIRPDLKSYSIMVDCLCMVGKVDDALHYFEELKL 991

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            SG  PD + YN+M+ GL +  ++  A++L DEM   G  PD+ TYN ++  +   G  ++
Sbjct: 992  SGLDPDLVCYNLMINGLGRSQRVEEALSLFDEMRNRGITPDLYTYNALILNLGIAGMVEE 1051

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A   +++   KG  P + TY  LI          RA  V   M + GC P+  T+  L N
Sbjct: 1052 AGKMYEELQLKGLEPNVFTYNALIRGHSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPN 1111

Query: 301  FS 302
             S
Sbjct: 1112 QS 1113



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 47/155 (30%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINL-IRGLIRIDRIEKA 171
            +  D K+ + ++   C  GK+ DA    + +      PD   C NL I GL R  R+E+A
Sbjct: 959  IRPDLKSYSIMVDCLCMVGKVDDALHYFEELKLSGLDPDL-VCYNLMINGLGRSQRVEEA 1017

Query: 172  SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
              +   M   G  PD  TYN ++  L   G +  A  + +E+ + G EP+V TYN ++R 
Sbjct: 1018 LSLFDEMRNRGITPDLYTYNALILNLGIAGMVEEAGKMYEELQLKGLEPNVFTYNALIRG 1077

Query: 232  MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
               +G   +A   +K  +  GC P   T+  L  Q
Sbjct: 1078 HSMSGNPDRAYAVYKKMMVGGCRPNTGTFAQLPNQ 1112


>gi|297807691|ref|XP_002871729.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297317566|gb|EFH47988.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 504

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 224/444 (50%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           ++L+N     KL D+  L   M +   +P       L+  + ++ + +    + + M M 
Sbjct: 51  EMLRNGIRYMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   +  T N+++   C+  Q+  A++ L +M   G EPD++T+ ++L       +   A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDA 170

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +  +   +  G  P ++ Y  +I+ +CK   +  A+++L+ M ++G  PD VTYNSL++ 
Sbjct: 171 LYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISG 230

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G++DDA  +++ +  R + P+  T+N L+ +    G     +++ + M   S  P 
Sbjct: 231 LCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPD 290

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + TY++LI GLC Y  +D A   F  MVSK C PD+VTY+ ++   CK   +   ++L  
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++        +TY  LI G  + G +  A  ++  M+  G+ P+ IT+  L+ G C   
Sbjct: 351 EMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNG 410

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++E+A+ +L ++ K G       Y ++I G+CK+ +V  A  +   +      PD   ++
Sbjct: 411 KIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEVADAWDLYCSLNLKGLTPDIWTYT 470

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++  +   G+  EA  L++K+ E
Sbjct: 471 AMMLGLYKKGLRGEADALFRKMKE 494



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 105/354 (29%), Positives = 180/354 (50%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   +L  FC   ++ DA  + D M      P+      +I GL +  +++ A  
Sbjct: 148 EPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCKSKQVDNALD 207

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L  M + G  PD +TYN ++ GLC  G+   A  ++  M+     PDV T+N ++    
Sbjct: 208 LLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFTFNALIDACV 267

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+  +A   +++ +R+   P ++TY++LI  +C    +  A ++   M  +GC PD+V
Sbjct: 268 KEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMVSKGCFPDVV 327

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY+ L+N  CK  K +  + +   +  RG+  N++TY  L+      G  +  ++I   M
Sbjct: 328 TYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTVLIQGYCRAGKLNVAEEIFKWM 387

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P + TYN+L++GLC  G +++A+     M       DIVTYN ++  +CK G +
Sbjct: 388 VFCGVPPNIITYNVLLHGLCDNGKIEKALVILADMQKSGMDADIVTYNIIIRGMCKAGEV 447

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +A  L   LN    +P + TY  ++ GL KKG   +A  L+ +M E+GI P++
Sbjct: 448 ADAWDLYCSLNLKGLTPDIWTYTAMMLGLYKKGLRGEADALFRKMKEDGILPNE 501



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 84/326 (25%), Positives = 159/326 (48%), Gaps = 10/326 (3%)

Query: 77  EWSSESHVLAVNKKLRGLTITKKSHDPS--LPSSDGPFVENDEKTNNKILQNFCSRGKLT 134
           E   E +V+  N  + GL  +K+  +    L   +   +  D  T N ++   C+ G+  
Sbjct: 179 EMGYEPNVVIYNTIIDGLCKSKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWD 238

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           DA++++  M +R   PD      LI   ++  RI +A ++ + M+     PD +TY++++
Sbjct: 239 DATRMVSCMTKREIYPDVFTFNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLI 298

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            GLC   ++  A  +   M   GC PDV+TY+ ++     + K +  +  + +  ++G  
Sbjct: 299 YGLCMYSRLDEAEQMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVV 358

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
              +TYT+LI+  C+   +  A E+   M   G  P+I+TYN L++  C  GK + A+++
Sbjct: 359 RNTVTYTVLIQGYCRAGKLNVAEEIFKWMVFCGVPPNIITYNVLLHGLCDNGKIEKALVI 418

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRG----CWDAVDKILDIMNEASHSPTVFTYNILIN 370
           + ++   GM+ + +TYN ++  +   G     WD    +   +N    +P ++TY  ++ 
Sbjct: 419 LADMQKSGMDADIVTYNIIIRGMCKAGEVADAWD----LYCSLNLKGLTPDIWTYTAMML 474

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPD 396
           GL K GL   A   F +M      P+
Sbjct: 475 GLYKKGLRGEADALFRKMKEDGILPN 500



 Score =  124 bits (310), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 79/285 (27%), Positives = 131/285 (45%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P I  ++ L++   K  KYD  + +   +   G+  N  T N LL+              
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L  M +  H P + T+  L+NG C+   +  A+  F++MV    +P++V YNT++  LCK
Sbjct: 139 LGKMMKLGHEPDIVTFGSLLNGFCRGDRIYDALYMFDRMVEMGYEPNVVIYNTIIDGLCK 198

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              ++ AL LL+ +      P  +TYN+LI GL   G  + A  +   M +  I PD  T
Sbjct: 199 SKQVDNALDLLNRMEVDGIRPDAVTYNSLISGLCNSGRWDDATRMVSCMTKREIYPDVFT 258

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              LI    +  ++ EA +L +E+ +R        Y L+I+GLC   ++D A Q+   M+
Sbjct: 259 FNALIDACVKEGRISEAEELYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEQMFGFMV 318

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           S    PD   +S ++         E   KL+ ++ +  V     T
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363


>gi|414591656|tpg|DAA42227.1| TPA: PPR-814a [Zea mays]
          Length = 816

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 230/485 (47%), Gaps = 37/485 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASK 173
           D  + N +L++ C++GK   A  L+ +MA    +  PD      +I G  +   + KA  
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACD 242

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + MV  G  PD +TY+ +V  LCK   +  A A L +M   G  PD  TYN ++    
Sbjct: 243 LFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 302

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G++K+A+  +K+  R+   P ++    L+  +CK   I  A +V D MA++G +PD+ 
Sbjct: 303 STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +Y  ++N    +G   D   + + +L  G+ P+  T+N L+ +  + G  D    I + M
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEM 422

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP------------------ 395
            +    P V TY  +I  LC+ G +D A+  FNQM+ +   P                  
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482

Query: 396 -----------------DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
                            DIV + +++  LCK G + +A  +  L       P  + YN L
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +DG    G MEKA+ ++  M+  GI P+ + + TL+ G+C+  +++E + L +E+ ++G 
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           K     Y ++I GL ++ +   A      M  S    +   +S +++ +  +   +EA  
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662

Query: 559 LWQKL 563
           L+++L
Sbjct: 663 LFKEL 667



 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/448 (25%), Positives = 219/448 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  + S G+  +A ++   M R++ +PD      L+  L +  +I++A  V 
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M M G  PD  +Y +M+ G   +G +     L D M   G  PD+ T+N +++   + 
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANC 409

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+  + +    G  P+++TY  +I  +C+   +  A+E  + M  +G  PD   Y
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+   C  G    A  +I+ +++ GM  + + + +++++L   G       I D+   
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    YN+L++G C  G +++A+  F+ MVS   +P++V Y T++   CK G ++E
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            L L   +      P  I YN +IDGL + G    A V + +M E+GI+ +  T+  ++ 
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 649

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G  +    +EA+ L KE+     K+       +I G+ ++++V+ A  +   +  S   P
Sbjct: 650 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
               +S ++  +  +G+ EEA  ++  +
Sbjct: 710 CAVTYSIMITNLLKEGLVEEAEDMFSSM 737



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 200/400 (50%), Gaps = 3/400 (0%)

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-ALLDEMSVSGCEPDV 222
           R  R E A      ++ +G   D I  + ++ G C+  +   A+  LL      GC PDV
Sbjct: 125 RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 184

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVL 280
            +YN +L+++ + GK  QA    +     G  C P ++ Y  +I+   K+  + +A ++ 
Sbjct: 185 FSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLF 244

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
            +M   G  PD+VTY+S+V+  CK    D A   +  ++++G+ P++ TYN L++   S 
Sbjct: 245 KEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST 304

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G W    ++   M   S  P V   N L+  LCKYG +  A + F+ M  K   PD+ +Y
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             +L     +G L +   L  L+ G   +P + T+N LI   A  G ++KAM+++ +M +
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRD 424

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           +G+ P  +T+ T+I   CR  ++++A++   ++  +G      AY  +I G C    +  
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK 484

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           A +++  ++++  + D   F +I+  +   G   +A  ++
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 112/427 (26%), Positives = 206/427 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++ + C  GK+ +A  + D MA + Q PD      ++ G      +   + +  +M+ 
Sbjct: 330 NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD  T+N+++      G +  A+ + +EM   G +P V+TY T++  +   GK   
Sbjct: 390 DGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +   + +G  P    Y  LI+  C    + +A E++ ++   G   DIV + S++N
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+  DA  + +  ++ G+ P+++ YN L+      G  +   ++ D M  A   P
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V  Y  L+NG CK G +D  ++ F +M+ K  +P  + YN ++  L + G    A    
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 629

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           H +  S  +    TY+ ++ GL K  C ++A+ L+ ++    +  D IT  T+I G  + 
Sbjct: 630 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 689

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +VEEA DL   I + G       Y ++I  L K   V+ A  +   M ++  +PD  + 
Sbjct: 690 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRLL 749

Query: 541 STIVKKV 547
           + +V+++
Sbjct: 750 NHVVREL 756



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 102/412 (24%), Positives = 194/412 (47%), Gaps = 5/412 (1%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T N +++ + + G L  A  + + M      P     + +I  L RI +++
Sbjct: 389 GDGIAPDIYTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMD 448

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A +    M+  G VPD   Y+ ++ G C  G +  A  L+ E+  +G   D++ + +I+
Sbjct: 449 DAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSII 508

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G+   A   +   +  G  P  + Y +L++  C    + +A+ V D M   G  
Sbjct: 509 NNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIE 568

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++V Y +LVN  CK G+ D+ + +   +L +G++P++I YN ++  L   G        
Sbjct: 569 PNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVK 628

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M E+  +    TY+I++ GL K    D AI  F ++ + N + DI+T NT++  + +
Sbjct: 629 FHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQ 688

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              + EA  L   ++ S   PC +TY+ +I  L K+G +E+A  ++  M   G  PD   
Sbjct: 689 TRRVEEAKDLFASISRSGLVPCAVTYSIMITNLLKEGLVEEAEDMFSSMQNAGCEPDSRL 748

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI-----HGLCKSK 516
              ++    + +++  A   L +I +R   + +    L++      G C+ +
Sbjct: 749 LNHVVRELLKKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQ 800



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 38/243 (15%)

Query: 359 SPTVFTYNILIN-----------------------------------GLCKYGLVDRAIN 383
           SPT +TY IL++                                   G C+    D A++
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 384 S-FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLID 440
              ++     C PD+ +YN +L +LC +G   +A  LL ++   G+ CSP ++ YNT+ID
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  K+G + KA  L+ +M++ GI PD +T+ +++   C+A  +++A   L+++  +G   
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            N  Y  +I+G   + +   A++V + M      PD    +T++  +   G  +EA  ++
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 561 QKL 563
             +
Sbjct: 350 DTM 352



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           SP   TY  L+D   +    E A+  +GQ++  G+  D I    L+ GFC A + +EA+D
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 489 -LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS--SRYKPDDTVFSTIVK 545
            LL    + G      +Y +++  LC   K   A  +L +M    +   PD   ++T++ 
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 546 KVADDGMTEEAYKLWQKLIE 565
               +G   +A  L++++++
Sbjct: 230 GFFKEGDVNKACDLFKEMVQ 249


>gi|297832060|ref|XP_002883912.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297329752|gb|EFH60171.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 623

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 218/441 (49%), Gaps = 3/441 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +C    + +A +   +M  +   P    C +++  L R++RIE A      M    
Sbjct: 162 MVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYADMYRME 221

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  T+N+M+  LCK G+++ A   L  M   G +P ++TYNT+++     G+ + A 
Sbjct: 222 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGAR 281

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               +   KG  P L TY  ++  +C +    RA EVL +M   G  PD V+YN L+   
Sbjct: 282 MIISEMKSKGFQPDLQTYNPILSWMCNE---GRASEVLREMKGIGLVPDSVSYNILIRGC 338

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
              G  + A    + ++ +GM P   TYNTL+H L      +A + ++  + E       
Sbjct: 339 SNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 398

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYNI+ING C++G   +A    ++M++   +P   TY +++  LC+     EA +L   
Sbjct: 399 VTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEK 458

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           + G    P L+  NTL+DG    G M++A  L  +M    I PDD+T+  L+ G C   +
Sbjct: 459 VVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGK 518

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
            EEA +L+ E+ +RG K  + +Y  +I G  K      A  V + M+S  + P    ++ 
Sbjct: 519 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNA 578

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++K ++ +   E A +L +++
Sbjct: 579 LLKGLSKNQDGELAEELLREM 599



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/403 (29%), Positives = 198/403 (49%), Gaps = 3/403 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++++  T N ++   C  GKL  A   + IM      P       L++G     RIE A 
Sbjct: 222 IKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGRIEGAR 281

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M   G  PD  TYN ++  +C  G+   A  +L EM   G  PD ++YN ++R  
Sbjct: 282 MIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREMKGIGLVPDSVSYNILIRGC 338

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            +NG  + A  +  + +++G  P   TY  LI  +  +  I  A  ++ ++  +G   D 
Sbjct: 339 SNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKGIVLDS 398

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN ++N  C+ G    A  + + +++ G++P   TY +L++ L  R      D++ + 
Sbjct: 399 VTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREADELFEK 458

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +      P +   N L++G C  G +DRA +   +M   N  PD VTYN ++  LC EG 
Sbjct: 459 VVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGLCGEGK 518

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             EA +L+  +      P  I+YNTLI G +KKG  + A ++  +M+  G +P  +T+  
Sbjct: 519 FEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTLLTYNA 578

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
           L+ G  +    E A +LL+E+   G    +S++  VI  + KS
Sbjct: 579 LLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMSKS 621



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 118/406 (29%), Positives = 201/406 (49%), Gaps = 6/406 (1%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M  ++ +  F+  IN+   L +  +++KA   L IM   G  P  +TYN +V G   RG+
Sbjct: 220 MEIKSNVYTFNIMINV---LCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGR 276

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           I  A  ++ EM   G +PD+ TYN IL  M + G+  + +   ++    G  P  ++Y I
Sbjct: 277 IEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGRASEVL---REMKGIGLVPDSVSYNI 333

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI        +  A    D+M  +G  P   TYN+L++    + K + A ++I  +  +G
Sbjct: 334 LIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 393

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +  +S+TYN +++     G       + D M      PT FTY  LI  LC+      A 
Sbjct: 394 IVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREAD 453

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             F ++V K  +PD+V  NT++   C  G ++ A  LL  ++  +  P  +TYN L+ GL
Sbjct: 454 ELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRGL 513

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
             +G  E+A  L G+M   GI PD I++ TLI G+ +    + A  +  E+   G     
Sbjct: 514 CGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFIVRDEMLSLGFNPTL 573

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
             Y  ++ GL K++  ++A ++L  M S    P+D+ F ++++ ++
Sbjct: 574 LTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMS 619



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 105/363 (28%), Positives = 177/363 (48%), Gaps = 3/363 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++Q +  RG++  A  +I  M  +   PD      ++  +    R   AS+VL+ M
Sbjct: 263 TYNTLVQGYSLRGRIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEGR---ASEVLREM 319

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VPD+++YN+++ G    G + +A A  DEM   G  P   TYNT++  +F   K 
Sbjct: 320 KGIGLVPDSVSYNILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKI 379

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A    ++   KG     +TY I+I   C+     +A  + D+M  +G  P   TY SL
Sbjct: 380 EAAEILIREIREKGIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSL 439

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C++ K  +A  +   ++ +GM+P+ +  NTL+    + G  D    +L  M+  + 
Sbjct: 440 IYVLCRRNKTREADELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNI 499

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TYN L+ GLC  G  + A     +M  +  +PD ++YNT++    K+G    A  
Sbjct: 500 DPDDVTYNCLMRGLCGEGKFEEARELMGEMKRRGIKPDHISYNTLISGYSKKGDTKHAFI 559

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   +     +P L+TYN L+ GL+K    E A  L  +M   GI P+D +  ++I    
Sbjct: 560 VRDEMLSLGFNPTLLTYNALLKGLSKNQDGELAEELLREMKSEGIVPNDSSFCSVIEAMS 619

Query: 479 RAD 481
           ++D
Sbjct: 620 KSD 622



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 106/377 (28%), Positives = 183/377 (48%), Gaps = 3/377 (0%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           TI ++ MV   C+   +  AI     M   G +P   T N IL  +    + + A  F+ 
Sbjct: 156 TILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYA 215

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           D  R      + T+ I+I  +CK+  + +A   L  M   G  P IVTYN+LV     +G
Sbjct: 216 DMYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRG 275

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           + + A ++I+ + S+G +P+  TYN +L  + + G      ++L  M      P   +YN
Sbjct: 276 RIEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMKGIGLVPDSVSYN 332

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           ILI G    G ++ A    ++MV +   P   TYNT++  L  E  +  A  L+  +   
Sbjct: 333 ILIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREK 392

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
                 +TYN +I+G  + G  +KA  L+ +MM +GI P   T+ +LI+  CR ++  EA
Sbjct: 393 GIVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREA 452

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            +L +++  +G K        ++ G C +  +D A  +L+ M      PDD  ++ +++ 
Sbjct: 453 DELFEKVVGKGMKPDLVMMNTLMDGHCATGNMDRAFSLLKEMDRMNIDPDDVTYNCLMRG 512

Query: 547 VADDGMTEEAYKLWQKL 563
           +  +G  EEA +L  ++
Sbjct: 513 LCGEGKFEEARELMGEM 529



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 81/307 (26%), Positives = 151/307 (49%), Gaps = 3/307 (0%)

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           I +  ++   C+   +  AIE    M  +G  P   T N +++   +  + ++A +   +
Sbjct: 157 ILFDFMVRFYCQLRMVDEAIECFYLMKEKGFDPKTETCNHILSLLSRLNRIENAWVFYAD 216

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +    ++ N  T+N +++ L   G        L IM      PT+ TYN L+ G    G 
Sbjct: 217 MYRMEIKSNVYTFNIMINVLCKEGKLKKAKGFLGIMESFGIKPTIVTYNTLVQGYSLRGR 276

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           ++ A    ++M SK  QPD+ TYN +L  +C EG    A ++L  + G    P  ++YN 
Sbjct: 277 IEGARMIISEMKSKGFQPDLQTYNPILSWMCNEG---RASEVLREMKGIGLVPDSVSYNI 333

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI G +  G +E A     +M++ G+ P   T+ TLI G    +++E A  L++EI ++G
Sbjct: 334 LIRGCSNNGDLETAFAYRDEMVKQGMVPTFYTYNTLIHGLFMENKIEAAEILIREIREKG 393

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
             + +  Y +VI+G C+      A  + + M++   KP    +++++  +     T EA 
Sbjct: 394 IVLDSVTYNIVINGYCQHGDAKKAFALHDEMMTDGIKPTQFTYTSLIYVLCRRNKTREAD 453

Query: 558 KLWQKLI 564
           +L++K++
Sbjct: 454 ELFEKVV 460


>gi|297823043|ref|XP_002879404.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297325243|gb|EFH55663.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 605

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 215/463 (46%), Gaps = 35/463 (7%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           EK  + + + +   G   +  ++ D M ++    D   CI  +    +  RI+   +  +
Sbjct: 135 EKFFDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKKRRRIDLCLEFFR 194

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            MV SG      +  ++V GLC+RG++  +  L+ E S  G +P+  TYNTI+     + 
Sbjct: 195 RMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYTYNTIINAYLKHR 254

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
            F       K   + G     +TYT+LIE   K   +    ++ D+M   G   DI  Y 
Sbjct: 255 DFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMRERGIESDIHVYT 314

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL++++C++G    A L+ + L  +G+ P+S TY  L+  +   G   A + +++ M   
Sbjct: 315 SLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEMGAAEILMNEMQSK 374

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV------------- 403
             + T   +N LING C+ G++D A   ++ M  K  Q D+ T NT+             
Sbjct: 375 GVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEA 434

Query: 404 ----------------------LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
                                 +   CKEG + EA +L   ++     P  ITYN +I  
Sbjct: 435 KQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYA 494

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K+G +++A  L+  M  NG+ PD  T+ +LI G C AD V+EA+ L  E+G +G    
Sbjct: 495 YCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQN 554

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +  Y ++I GL K+ K D A  + + +    Y  D+ V++ ++
Sbjct: 555 SVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALI 597



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 77/296 (26%), Positives = 141/296 (47%), Gaps = 2/296 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E+D      ++   C +G +  A  L D +  +  +P  H    LI G+ ++  +  A+
Sbjct: 306 IESDIHVYTSLISWNCRKGNIKRAFLLFDELTEKGLLPSSHTYGALIDGVCKVGEM-GAA 364

Query: 173 KVLQIMVMSGGVPDT-ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           ++L   + S GV  T + +N ++ G C++G I  A  + D M   G + DV T NTI   
Sbjct: 365 EILMNEMQSKGVNITQVVFNTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASC 424

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
                ++ +A  +    +  G     ++YT LI+  CK+  +  A  +  +M+ +   P+
Sbjct: 425 FNRLKRYDEAKQWLFRMMEGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPN 484

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            +TYN ++   CKQGK  +A  +  N+ + GM+P+S TY +L+H        D   ++  
Sbjct: 485 AITYNVMIYAYCKQGKVKEARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFS 544

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            M          TY ++I+GL K G  D A   ++++  K    D   Y  ++G++
Sbjct: 545 EMGLKGLDQNSVTYTVMISGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIGSM 600



 Score =  104 bits (259), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/220 (28%), Positives = 107/220 (48%), Gaps = 2/220 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C +G + +AS + D+M ++    D   C  +     R+ R ++A + L  M M
Sbjct: 384 NTLINGYCRKGMIDEASMIYDVMEKKGFQADVFTCNTIASCFNRLKRYDEAKQWLFRM-M 442

Query: 181 SGGVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            GGV   T++Y  ++   CK G +  A  L  EMS    +P+ ITYN ++      GK K
Sbjct: 443 EGGVRLSTVSYTNLIDVYCKEGNVEEAKRLFVEMSSKEVQPNAITYNVMIYAYCKQGKVK 502

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A   W +    G  P   TYT LI   C    +  A+ +  +M ++G   + VTY  ++
Sbjct: 503 EARKLWANMKANGMDPDSYTYTSLIHGECIADNVDEAMRLFSEMGLKGLDQNSVTYTVMI 562

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           +   K GK D+A  + + +  +G   ++  Y  L+ S+ S
Sbjct: 563 SGLSKAGKSDEAFGLYDEIKRKGYTIDNKVYTALIGSMHS 602



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 56/276 (20%), Positives = 116/276 (42%), Gaps = 13/276 (4%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD+    +L +      ++ +  L++N++++ G       Y   +  LGS      VD  
Sbjct: 76  PDLTAVVTLSHRLYSNRRFSEMRLLLNSVVNDGF------YERPVEGLGSA----MVD-- 123

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            DI  E       F ++++       G+ +  +  F+ MV K    D  +    L A  K
Sbjct: 124 CDISEEKFEFWEKF-FDLVFRVYVDNGMFEEGLRVFDYMVKKGLSIDERSCIVFLVAAKK 182

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              ++  L+    +  S     + +   +++GL ++G +EK+  L  +    GI P+  T
Sbjct: 183 RRRIDLCLEFFRRMVDSGVKITVYSLTIVVEGLCRRGEVEKSKKLIKEFSGKGIKPEAYT 242

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + T+I  + +         +LK + K G       Y L+I    K+ K++   ++ + M 
Sbjct: 243 YNTIINAYLKHRDFSGVEKILKVMKKDGVVYNKVTYTLLIELSVKNGKMNDVEKLFDEMR 302

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               + D  V+++++      G  + A+ L+ +L E
Sbjct: 303 ERGIESDIHVYTSLISWNCRKGNIKRAFLLFDELTE 338


>gi|22128591|gb|AAM52341.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 592

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 112/431 (25%), Positives = 222/431 (51%), Gaps = 1/431 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N +L+   +  K+ DA  L   + R N   P+      ++ GL +    +KA  +L++M 
Sbjct: 146 NTLLRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLME 205

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
                P+T  Y++++   CK G +  A +LL+EM      PD+ TY+T++  +    +++
Sbjct: 206 QGSTKPNTCIYSIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWE 265

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
                + + +     P + T+  +I+ +CK+  +  A E++  M  +G  PD++TYN ++
Sbjct: 266 NVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMII 325

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +    +G+ D A  + ++++++ +EPN I+YN L++    +   D   ++   +++    
Sbjct: 326 DGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLK 385

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P++ T N+L++GL + G    A N F++M+S    PD+ T+ T+LG   K G++ EA+  
Sbjct: 386 PSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSH 445

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            H L        +  Y  +IDGL K G ++KA   + ++   G+ PD IT+  +I G+C+
Sbjct: 446 FHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQ 505

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              ++EA D+L+++   G    N  Y +++ G  +S KV      LE +    +  +   
Sbjct: 506 EGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAAT 565

Query: 540 FSTIVKKVADD 550
              ++  +A+D
Sbjct: 566 VELLMDIIAED 576



 Score =  185 bits (470), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 107/418 (25%), Positives = 211/418 (50%), Gaps = 2/418 (0%)

Query: 148 QIPDFHFCINLI-RGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
           +IP   F ++++      + R +    VL I    G   + + +N ++ GL    +++ A
Sbjct: 102 RIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDA 161

Query: 207 IALLDEMSVSG-CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           + L  ++     CEP+ + Y T++  +   G  ++A    +   +    P    Y+I+I+
Sbjct: 162 VHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVID 221

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             CK   +  A  +L++M  +   PDI TY++L++  CK  ++++   +   ++   + P
Sbjct: 222 AFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYP 281

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N  T+N+++  L   G  +  ++I+  M E    P V TYN++I+G    G VDRA   F
Sbjct: 282 NVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIF 341

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           + M++K+ +P+I++YN ++    ++  ++EA+Q+   ++     P ++T N L+ GL + 
Sbjct: 342 DSMINKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFEL 401

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G  + A   + +M+  G  PD  TH TL+ G+ +   VEEA+    ++ +R        Y
Sbjct: 402 GRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIY 461

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             VI GLCK+ K+D A    E +      PD   ++ ++     +G+ +EA  + +K+
Sbjct: 462 TAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM 519



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 182/364 (50%), Gaps = 9/364 (2%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A +L  +M  +   P V++++ +L+ +     +   +  +++  +   P +    +I++ 
Sbjct: 56  AFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVN 115

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM-E 324
             C          VL     +G   + V +N+L+     + K  DAV +   L+   + E
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRENICE 175

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN + Y T+++ L  +G       +L +M + S  P    Y+I+I+  CK G++D A + 
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGATSL 235

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCK----EGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
            N+M  K+  PDI TY+T++ ALCK    E +    L+++HL    +  P + T+N++ID
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHL----NIYPNVCTFNSVID 291

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL K+G +E A  +   M+E G+ PD IT+  +I G+    QV+ A ++   +  +  + 
Sbjct: 292 GLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEP 351

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              +Y ++I+G  + KK+D A+QV   +     KP     + ++  + + G T+ A   +
Sbjct: 352 NIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFF 411

Query: 561 QKLI 564
            +++
Sbjct: 412 DEML 415



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 83/326 (25%), Positives = 148/326 (45%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C   +  +   L   M   N  P+     ++I GL +  ++E A ++++ M
Sbjct: 250 TYSTLIDALCKLSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYM 309

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD ITYNM++ G   RGQ+  A  + D M     EP++I+YN ++       K 
Sbjct: 310 IEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKI 369

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+   ++  +KG  P ++T  +L+  + +      A    D+M   G  PD+ T+ +L
Sbjct: 370 DEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTL 429

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K G  ++A+   + L  R  + N   Y  ++  L   G  D      + +     
Sbjct: 430 LGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGL 489

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TY  +I+G C+ GL+D A +   +M    C  D  TYN ++    +   ++E   
Sbjct: 490 HPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKA 549

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAK 444
            L  + G S S    T   L+D +A+
Sbjct: 550 FLEEIAGKSFSFEAATVELLMDIIAE 575



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 68/303 (22%), Positives = 133/303 (43%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK+ DA +++  M  +   PD      +I G     ++++A ++   M
Sbjct: 285 TFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSM 344

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +     P+ I+YN+++ G  ++ +I  A+ +  E+S  G +P ++T N +L  +F+ G+ 
Sbjct: 345 INKSIEPNIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRT 404

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K A  F+ + L  G  P L T+  L+    K   +  A+     +       +I  Y ++
Sbjct: 405 KSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAV 464

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK D A      L   G+ P+ ITY  ++      G  D    +L  M +   
Sbjct: 465 IDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGC 524

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                TYN+++ G  +   V        ++  K+   +  T   ++  + ++  L   + 
Sbjct: 525 LADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFSFEAATVELLMDIIAEDPSLLNMIP 584

Query: 419 LLH 421
             H
Sbjct: 585 EFH 587



 Score = 98.6 bits (244), Expect = 8e-18,   Method: Compositional matrix adjust.
 Identities = 60/225 (26%), Positives = 117/225 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N I+  +  RG++  A ++ D M  ++  P+      LI G  R  +I++A 
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPNIISYNILINGYARQKKIDEAM 373

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V + +   G  P  +T N+++ GL + G+ +SA    DEM  +G  PD+ T+ T+L   
Sbjct: 374 QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGY 433

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F NG  ++A+  +    R+     +  YT +I+ +CK   + +A    + + + G  PD+
Sbjct: 434 FKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDV 493

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +TY ++++  C++G  D+A  ++  +   G   ++ TYN ++   
Sbjct: 494 ITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 62/274 (22%), Positives = 120/274 (43%), Gaps = 5/274 (1%)

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N   N  C     DDA  +   ++     P+ ++++ LL +L     + +V  +   +++
Sbjct: 45  NEFENVKC----LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHK 100

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                  F  +I++N  C     D   +       K    + V +NT+L  L  E  + +
Sbjct: 101 LRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKD 160

Query: 416 ALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           A+ L   L+  + C P  + Y T+++GL KKG  +KA  L   M +    P+   +  +I
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVI 220

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             FC+   ++ A  LL E+ ++        Y  +I  LCK  + +    +   MI     
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           P+   F++++  +  +G  E+A ++ + +IE  V
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGV 314



 Score = 62.4 bits (150), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 50/228 (21%), Positives = 96/228 (42%), Gaps = 36/228 (15%)

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH------------LLNG 425
           +D A + F QMV     P +V+++ +L AL      +  + L              +L+ 
Sbjct: 53  LDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILSI 112

Query: 426 SSCSPCL-----------------------ITYNTLIDGLAKKGCMEKAMVLYGQMM-EN 461
              S CL                       + +NTL+ GL  +  ++ A+ L+ +++ EN
Sbjct: 113 VVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVREN 172

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
              P+++ + T++ G C+    ++A DLL+ + +   K     Y +VI   CK   +D A
Sbjct: 173 ICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTCIYSIVIDAFCKDGMLDGA 232

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             +L  M      PD   +ST++  +      E    L+ ++I   ++
Sbjct: 233 TSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 35/132 (26%), Positives = 62/132 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T+  +L  +   G + +A      + RR +  +      +I GL +  +++KA    
Sbjct: 422 DLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATF 481

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + + + G  PD ITY  M+ G C+ G +  A  +L +M  +GC  D  TYN I+R    +
Sbjct: 482 EKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRS 541

Query: 236 GKFKQAIGFWKD 247
            K  +   F ++
Sbjct: 542 NKVSEMKAFLEE 553



 Score = 44.7 bits (104), Expect = 0.13,   Method: Compositional matrix adjust.
 Identities = 24/124 (19%), Positives = 53/124 (42%)

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
           C++ A  L+ QM+     P  ++   L+            V L +EI K    +      
Sbjct: 52  CLDDAFSLFRQMVRTKPLPSVVSFSKLLKALVHMKHYSSVVSLFREIHKLRIPVHEFILS 111

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           +V++  C   + D+   VL +        +  +F+T+++ +  +   ++A  L++KL+  
Sbjct: 112 IVVNSCCLMHRTDLGFSVLAIHFKKGIPFNQVIFNTLLRGLFAENKVKDAVHLFKKLVRE 171

Query: 567 KVFE 570
            + E
Sbjct: 172 NICE 175


>gi|357499275|ref|XP_003619926.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355494941|gb|AES76144.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 727

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 122/452 (26%), Positives = 218/452 (48%), Gaps = 8/452 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN--------LIRGLIRIDR 167
           +E +   ++   C  G++ +A  L+ ++ +  +     F +         +I  L R   
Sbjct: 141 NEVSYGILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGF 200

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +++  +    M+ +G  P+  TY  ++ GLC  G+      L+DEM   G +  V  +  
Sbjct: 201 VDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTV 260

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  NG   +A   + + + +G  P ++T T L+   C +  +  A E+ D +   G
Sbjct: 261 LIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWG 320

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D+ TYN  ++  CK G+  DAV V + +   G+ PN +TYN+L+  L   G      
Sbjct: 321 FKRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAW 380

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +I+  M+ +  +P + T  IL++GLCK   +D+AI  FNQ+V     PD+ +Y  ++   
Sbjct: 381 EIVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGC 440

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C    + EA+ LL  ++  +  P ++TY+ LIDGL + G +  A  L  +M   G  PD 
Sbjct: 441 CTSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDT 500

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           IT+  L+    +   ++EAV L  ++ KRG +     Y ++I G CKS+++D AI +   
Sbjct: 501 ITYSILLDALWKKQHLDEAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFRE 560

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           M      PD   ++ +   V   G     +K 
Sbjct: 561 MHMKNLVPDIVTYTILFNAVFKSGSNSYEWKF 592



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 114/397 (28%), Positives = 202/397 (50%), Gaps = 24/397 (6%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           DG FV+ +    + ++   C  G + +  +  + M      P+     +LIRGL  + + 
Sbjct: 177 DGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKF 236

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +   ++  M+  G       + +++ GLCK G +  A  + DEM   G EP+++T   +
Sbjct: 237 LEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTAL 296

Query: 229 L------------RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           +            R +FD      AIG W      G    + TY + I   CK   +  A
Sbjct: 297 MGGYCLKGNVDMARELFD------AIGEW------GFKRDVWTYNVFIHGYCKVGRVRDA 344

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + V D+M  EG  P+IVTYNSL++  CK G+   A  ++  +   G+ P+ +T   LL  
Sbjct: 345 VRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDG 404

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L      D    + + + E+  +P V++Y ILI+G C    +  A+N    M  KN  P 
Sbjct: 405 LCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPH 464

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           IVTY+ ++  LC+ G ++ A +LL+ ++     P  ITY+ L+D L KK  +++A+ L+ 
Sbjct: 465 IVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFN 524

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           QM++ G+ PD + +  +I G+C++++++EA++L +E+
Sbjct: 525 QMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREM 561



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 111/419 (26%), Positives = 217/419 (51%), Gaps = 14/419 (3%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL------- 210
           +++GL     + KA +    +V +G   + ++Y +++ GLC+ G++  A+ LL       
Sbjct: 113 VLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEKEK 172

Query: 211 ----DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
               D   V G   +V+ Y+ ++  +  NG   +   F+ + +  G  P   TY  LI  
Sbjct: 173 EKEKDGFFVKG---NVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRG 229

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +C          ++D+M   G    +  +  L++  CK G   +A  + + +++RG EPN
Sbjct: 230 LCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPN 289

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
            +T   L+     +G  D   ++ D + E      V+TYN+ I+G CK G V  A+  F+
Sbjct: 290 IVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKVGRVRDAVRVFD 349

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M  +   P+IVTYN+++  LCK G ++ A +++  ++ S  +P ++T   L+DGL K  
Sbjct: 350 EMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTCCILLDGLCKSK 409

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +++A++L+ Q++E+G++PD  ++  LI G C + ++ EA++LL+++  +        Y 
Sbjct: 410 RLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRDMHLKNLVPHIVTYS 469

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +I GLC+S ++  A ++L  M      PD   +S ++  +      +EA  L+ ++I+
Sbjct: 470 CLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLDEAVFLFNQMIK 528



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/408 (28%), Positives = 207/408 (50%), Gaps = 11/408 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T   +++  C  GK  +   L+D M RR      +    LI GL +   + +A ++ 
Sbjct: 219 NEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMF 278

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  P+ +T   ++GG C +G +  A  L D +   G + DV TYN  +      
Sbjct: 279 DEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFKRDVWTYNVFIHGYCKV 338

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ + A+  + +  R+G  P ++TY  LI+ +CK   ++ A E++  M   G +PDIVT 
Sbjct: 339 GRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEIVKTMHRSGLTPDIVTC 398

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS-LGSRGCWDAVDKILDIMN 354
             L++  CK  + D A+L+ N L+  G+ P+  +Y  L+H    SR   +A++ + D M+
Sbjct: 399 CILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCTSRRMGEAMNLLRD-MH 457

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
             +  P + TY+ LI+GLC+ G +  A    N+M  K   PD +TY+ +L AL K+  L+
Sbjct: 458 LKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTITYSILLDALWKKQHLD 517

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA+ L + +      P ++ Y  +IDG  K   +++A+ L+ +M    + PD +T+  L 
Sbjct: 518 EAVFLFNQMIKRGLEPDVMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILF 577

Query: 475 WGFCRADQVE---EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
               ++       + V+++++I      ++  A       LCKS+ +D
Sbjct: 578 NAVFKSGSNSYEWKFVNVIRDINPPPRVLKYLA------ALCKSEHLD 619



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 88/322 (27%), Positives = 160/322 (49%), Gaps = 35/322 (10%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + D  T N  +  +C  G++ DA ++ D M R   +P+     +LI  L +   +  A +
Sbjct: 322 KRDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWE 381

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +++ M  SG  PD +T  +++ GLCK  ++  AI L +++  SG  PDV +Y  ++    
Sbjct: 382 IVKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCC 441

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            + +  +A+   +D   K   P+++TY+ LI+ +C+   I+ A  +L++M ++G  PD +
Sbjct: 442 TSRRMGEAMNLLRDMHLKNLVPHIVTYSCLIDGLCRSGRISNAWRLLNEMHVKGPLPDTI 501

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY+ L++   K+   D+AV + N ++ RG+EP+                           
Sbjct: 502 TYSILLDALWKKQHLDEAVFLFNQMIKRGLEPD--------------------------- 534

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                   V  Y I+I+G CK   +D AIN F +M  KN  PDIVTY  +  A+ K G  
Sbjct: 535 --------VMCYTIMIDGYCKSERIDEAINLFREMHMKNLVPDIVTYTILFNAVFKSGSN 586

Query: 414 NEALQLLHLLNGSSCSPCLITY 435
           +   + ++++   +  P ++ Y
Sbjct: 587 SYEWKFVNVIRDINPPPRVLKY 608



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 92/374 (24%), Positives = 183/374 (48%), Gaps = 14/374 (3%)

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G +  + ++  ++   G   D +  NT+L+ +  NG   +A+ F  + +  G     ++Y
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 261 TILIEQVCKQCGIARAIEVL-----------DDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            ILI  +C+   +  A+ +L           D   ++G   ++V Y+ +++  C+ G  D
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKG---NVVMYSIVIDCLCRNGFVD 202

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +     N ++  G+ PN  TY +L+  L   G +     ++D M       +V+ + +LI
Sbjct: 203 EGFEFYNEMMGNGVCPNEFTYGSLIRGLCGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLI 262

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +GLCK G++  A   F++MV++  +P+IVT   ++G  C +G ++ A +L   +      
Sbjct: 263 DGLCKNGMLVEAREMFDEMVNRGYEPNIVTCTALMGGYCLKGNVDMARELFDAIGEWGFK 322

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
             + TYN  I G  K G +  A+ ++ +M   G+ P+ +T+ +LI   C+A +V  A ++
Sbjct: 323 RDVWTYNVFIHGYCKVGRVRDAVRVFDEMCREGVVPNIVTYNSLIDCLCKAGEVSGAWEI 382

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           +K + + G         +++ GLCKSK++D AI +   ++ S   PD   ++ ++     
Sbjct: 383 VKTMHRSGLTPDIVTCCILLDGLCKSKRLDQAILLFNQLVESGLTPDVWSYTILIHGCCT 442

Query: 550 DGMTEEAYKLWQKL 563
                EA  L + +
Sbjct: 443 SRRMGEAMNLLRDM 456



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 54/209 (25%), Positives = 110/209 (52%), Gaps = 8/209 (3%)

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL-- 423
           N ++ GLC  G V +A+   +++V+     + V+Y  ++  LC+ G +NEA+ LL ++  
Sbjct: 111 NTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSYGILINGLCENGRVNEAVNLLRMIEK 170

Query: 424 ------NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
                 +G      ++ Y+ +ID L + G +++    Y +MM NG+ P++ T+ +LI G 
Sbjct: 171 EKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGFEFYNEMMGNGVCPNEFTYGSLIRGL 230

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C   +  E   L+ E+ +RG  +    + ++I GLCK+  +  A ++ + M++  Y+P+ 
Sbjct: 231 CGVGKFLEGFGLVDEMIRRGLDVSVYVFTVLIDGLCKNGMLVEAREMFDEMVNRGYEPNI 290

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
              + ++      G  + A +L+  + EW
Sbjct: 291 VTCTALMGGYCLKGNVDMARELFDAIGEW 319



 Score = 48.9 bits (115), Expect = 0.006,   Method: Compositional matrix adjust.
 Identities = 26/127 (20%), Positives = 65/127 (51%), Gaps = 8/127 (6%)

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G +  +  ++G++++ G   D +   T++ G C    V +A++   EI   G  +   +Y
Sbjct: 86  GHVSFSFSIFGKILKRGYGLDTVALNTVLKGLCVNGGVLKALEFHDEIVNNGFSLNEVSY 145

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF--------STIVKKVADDGMTEEAY 557
            ++I+GLC++ +V+ A+ +L ++   + K  D  F        S ++  +  +G  +E +
Sbjct: 146 GILINGLCENGRVNEAVNLLRMIEKEKEKEKDGFFVKGNVVMYSIVIDCLCRNGFVDEGF 205

Query: 558 KLWQKLI 564
           + + +++
Sbjct: 206 EFYNEMM 212


>gi|312190399|gb|ADQ43199.1| unknown [Eutrema parvulum]
          Length = 1128

 Score =  197 bits (501), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 116/436 (26%), Positives = 213/436 (48%), Gaps = 1/436 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G L +A++    M R    P    C  L+    ++ + +   +  + M+ +G  P   TY
Sbjct: 77  GMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTY 136

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N+M+  + K G I +A  L +EM   G  PD +TYN+++      G+    + F+++   
Sbjct: 137 NIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKS 196

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
             C P +ITY  LI   CK   + + +E   +M   G  P++V+Y++LV+  CK+     
Sbjct: 197 MSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQ 256

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+    ++   G  PN  TY +L+ +    G      ++ + M E      V TY  LI+
Sbjct: 257 AIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALID 316

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GLC    +  A   F +MV+    P++ +YN ++    K   ++ AL+LL+ L G    P
Sbjct: 317 GLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQP 376

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            L+ Y T I GL     +E A V+  +M ENGI  + + + TL+  + ++    E + LL
Sbjct: 377 DLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLL 436

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS-RYKPDDTVFSTIVKKVAD 549
           +E+ +  +++    + ++I GLCK+K V  AI     M +    +P+  V++ ++  +  
Sbjct: 437 EEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCK 496

Query: 550 DGMTEEAYKLWQKLIE 565
           +   + A  L++++ +
Sbjct: 497 ENQVKAATTLFEQMAQ 512



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/381 (29%), Positives = 189/381 (49%), Gaps = 1/381 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++  FC  GKL    +    M +    P+      L+    + D +++A K
Sbjct: 200 EPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIK 259

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
               M   G VP+  TY  +V   CK G +  A  L +EM   G E +V+TY  ++  + 
Sbjct: 260 FYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLC 319

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           D  + K+A   +   +  G  P L +Y  LI    K   + RA+E+L+++   G  PD++
Sbjct: 320 DAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLL 379

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y + +   C   K + A +V+N +   G++ N++ Y TL+ +    G       +L+ M
Sbjct: 380 LYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEM 439

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGM 412
            E  H  TV T+ +LI+GLCK  LV +AI+ F +M +    QP+   Y  ++  LCKE  
Sbjct: 440 QELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGLCKENQ 499

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +  A  L   +      P    Y +L+DG  K+G M +A+ L  +M E G+  D + + +
Sbjct: 500 VKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDLLAYTS 559

Query: 473 LIWGFCRADQVEEAVDLLKEI 493
           L+WGF + +Q+++A   L+E+
Sbjct: 560 LVWGFSQCNQLQKARSFLEEM 580



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 112/445 (25%), Positives = 203/445 (45%), Gaps = 2/445 (0%)

Query: 121 NKILQNFC-SRGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           N IL+    S+ +L +     ++ + RN  +P F     L   LI +  +E+A++    M
Sbjct: 30  NSILREIVLSKAELEECDVFDELWSTRNVCVPGFGVFDALFSVLIDLGMLEEATQCFSKM 89

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P T + N ++    K G+         +M  +G +P V TYN ++  M+  G  
Sbjct: 90  KRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGSKPTVFTYNIMIDCMWKEGDI 149

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A G +++   +G  P  +TY  +I+   K   +   +   ++M    C PD++TYNSL
Sbjct: 150 EAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNSL 209

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK GK    +     +   G++PN ++Y+TL+ +           K    M    H
Sbjct: 210 INCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAIKFYVDMRRVGH 269

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  FTY  L++  CK G +  A    N+M+    + ++VTY  ++  LC    + EA +
Sbjct: 270 VPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTALIDGLCDAERMKEAEK 329

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +  +   P L +YN LI G  K   M++A+ L  ++   GI PD + + T IWG C
Sbjct: 330 LFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGIQPDLLLYGTFIWGLC 389

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
             +++E A  ++ E+ + G K     Y  ++    KS      + +LE M    ++    
Sbjct: 390 GLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLHLLEEMQELDHEVTVV 449

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            F  ++  +  + +  +A   + ++
Sbjct: 450 TFCVLIDGLCKNKLVSKAIDYFGRM 474



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/447 (25%), Positives = 209/447 (46%), Gaps = 1/447 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++      G +  A  L + M  R  IPD     ++I G  ++ R++      + M
Sbjct: 135 TYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 PD ITYN ++   CK G++   +    EM  SG +P+V++Y+T++         
Sbjct: 195 KSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVSYSTLVDAFCKEDMM 254

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           +QAI F+ D  R G  P   TYT L++  CK   ++ A  + ++M   G   ++VTY +L
Sbjct: 255 QQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEMLEVGVEWNVVTYTAL 314

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C   +  +A  +   +++ G+ PN  +YN L+H        D   ++L+ +     
Sbjct: 315 IDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRALELLNELKGRGI 374

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +  Y   I GLC    ++ A    N+M     + + + Y T++ A  K G   E L 
Sbjct: 375 QPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAYFKSGNPTEGLH 434

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGF 477
           LL  +        ++T+  LIDGL K   + KA+  +G+M  + G+ P+   +  +I G 
Sbjct: 435 LLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPNAAVYTAMIDGL 494

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+ +QV+ A  L +++ + G     +AY  ++ G  K   +  A+ + + M     K D 
Sbjct: 495 CKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRDKMAEIGMKLDL 554

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
             ++++V   +     ++A    +++I
Sbjct: 555 LAYTSLVWGFSQCNQLQKARSFLEEMI 581



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 72/277 (25%), Positives = 138/277 (49%)

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           C P    +++L +     G  ++A    + +    + P + + N LLH     G  D V 
Sbjct: 59  CVPGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 118

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +    M  A   PTVFTYNI+I+ + K G ++ A   F +M  +   PD VTYN+++   
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGY 178

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            K G L++ +     +   SC P +ITYN+LI+   K G + K +  Y +M ++G+ P+ 
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNV 238

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +++ TL+  FC+ D +++A+    ++ + G+      Y  ++   CK   +  A ++   
Sbjct: 239 VSYSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANE 298

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           M+    + +   ++ ++  + D    +EA KL+ K++
Sbjct: 299 MLEVGVEWNVVTYTALIDGLCDAERMKEAEKLFGKMV 335



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/312 (21%), Positives = 141/312 (45%), Gaps = 1/312 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +  T   ++   C   ++ +A KL   M     IP+      LI G ++   +++A 
Sbjct: 304 VEWNVVTYTALIDGLCDAERMKEAEKLFGKMVTAGVIPNLASYNALIHGFVKAKNMDRAL 363

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  +   G  PD + Y   + GLC   +I +A  +++EM  +G + + + Y T++   
Sbjct: 364 ELLNELKGRGIQPDLLLYGTFIWGLCGLEKIEAAKVVMNEMQENGIKANTLIYTTLMDAY 423

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPD 291
           F +G   + +   ++         ++T+ +LI+ +CK   +++AI+    M+ + G  P+
Sbjct: 424 FKSGNPTEGLHLLEEMQELDHEVTVVTFCVLIDGLCKNKLVSKAIDYFGRMSNDFGLQPN 483

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
              Y ++++  CK+ +   A  +   +   G+ P+   Y +L+     +G       + D
Sbjct: 484 AAVYTAMIDGLCKENQVKAATTLFEQMAQEGLVPDRTAYTSLMDGNLKQGNMLEALALRD 543

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M E      +  Y  L+ G  +   + +A +   +M+ +   PD V    VL    + G
Sbjct: 544 KMAEIGMKLDLLAYTSLVWGFSQCNQLQKARSFLEEMIGEEILPDEVLCIGVLKKHYELG 603

Query: 412 MLNEALQLLHLL 423
            ++EA+ L   L
Sbjct: 604 CIDEAVGLQSYL 615



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 57/248 (22%), Positives = 110/248 (44%), Gaps = 4/248 (1%)

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P    ++ L   L   G  +   +    M      P   + N L++   K G  D     
Sbjct: 61  PGFGVFDALFSVLIDLGMLEEATQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRF 120

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F  M+    +P + TYN ++  + KEG +  A  L   +      P  +TYN++IDG  K
Sbjct: 121 FKDMIGAGSKPTVFTYNIMIDCMWKEGDIEAARGLFEEMKFRGLIPDTVTYNSMIDGYGK 180

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G ++  +  + +M      PD IT+ +LI  FC++ ++ + ++  +E+ + G K    +
Sbjct: 181 VGRLDDTVYFFEEMKSMSCEPDVITYNSLINCFCKSGKLPKGLEFYREMKQSGLKPNVVS 240

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL- 563
           Y  ++   CK   +  AI+    M    + P++  ++++V      G   +A++L  ++ 
Sbjct: 241 YSTLVDAFCKEDMMQQAIKFYVDMRRVGHVPNEFTYTSLVDANCKIGNLSDAFRLANEML 300

Query: 564 ---IEWKV 568
              +EW V
Sbjct: 301 EVGVEWNV 308


>gi|449444228|ref|XP_004139877.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
 gi|449492643|ref|XP_004159059.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g62910-like [Cucumis sativus]
          Length = 585

 Score =  197 bits (500), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 114/423 (26%), Positives = 217/423 (51%), Gaps = 8/423 (1%)

Query: 150 PDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           P+F F +N LI  L  ++R+ +    +  ++  G +PD +TY  ++ GLC   +I  A  
Sbjct: 124 PNF-FTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATR 182

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK------GCPPYLITYTI 262
           L   M   GC P+V+TY T+++ +   G    A+   ++ L         C P + +Y I
Sbjct: 183 LFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNI 242

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           +I+++CK      A  + ++M  +G  PD+VT+++L++  CK+G   +A   +  ++ RG
Sbjct: 243 IIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRG 302

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + P+  T+ +L+      G  D+  ++   M    + P V +Y +LI G CK   V+ A+
Sbjct: 303 IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAM 362

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             +N+M+     PD+ T+  +L  L   G + +A +L  ++   +    L   +  +DGL
Sbjct: 363 KLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGL 422

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K GC+ +AM L+ ++    +  D  +   LI G C+A ++E A +L +++ + G +   
Sbjct: 423 CKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDV 482

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y ++I+G CK+ +VD A  + ++M  +   P+   +S ++     +   EE  KL  K
Sbjct: 483 VTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHK 542

Query: 563 LIE 565
           +I+
Sbjct: 543 MIQ 545



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 121/451 (26%), Positives = 223/451 (49%), Gaps = 6/451 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C+  ++ +    +  + RR  IPD     +LI+GL    RI +A+++   M
Sbjct: 128 TLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRM 187

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM------SVSGCEPDVITYNTILRTM 232
              G  P+ +TY  ++ GLC+ G I  A+ L  EM          C+P++ +YN I+  +
Sbjct: 188 QKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIIIDEL 247

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK+K+A   + + + +G  P ++T++ LI+ +CK+  +  A + L+ M + G  PD+
Sbjct: 248 CKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDL 307

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+ SL+   C  G  D A  +  ++ S+G EP+ I+Y  L++        +   K+ + 
Sbjct: 308 FTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNE 367

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P + T+ +L+ GL   G V  A   F  +       ++   +  L  LCK G 
Sbjct: 368 MLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGC 427

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L EA++L + L   +    + ++N LIDGL K   +E A  L+ ++ + G+ PD +T+  
Sbjct: 428 LFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCI 487

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I GFC+  QV+ A  L + + + G       Y  ++HG  K+ K++  +++L  MI   
Sbjct: 488 MINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKD 547

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                ++++ +   V+ D    E   + Q+ 
Sbjct: 548 VSLAASIYTIVEDMVSKDEKCREWLDILQRF 578



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/417 (27%), Positives = 212/417 (50%), Gaps = 6/417 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +++  C   ++++A++L   M +    P+      LI+GL R   I  A K+ 
Sbjct: 160 DVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLH 219

Query: 176 QIMVMSGGV------PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           Q M+           P+  +YN+++  LCK G+ + A  L +EM   G  PDV+T++ ++
Sbjct: 220 QEMLNGTSPYAINCKPNIFSYNIIIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALI 279

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
            T+   G   +A  F +  + +G  P L T+T LIE  C    +  A E+   M  +G  
Sbjct: 280 DTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYE 339

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD+++Y  L+   CK    ++A+ + N +L  G  P+  T+  LL  L   G      K+
Sbjct: 340 PDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKL 399

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
             ++   +    ++  ++ ++GLCK G +  A+  FN++ S N + DI ++N ++  LCK
Sbjct: 400 FGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCK 459

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              L  A +L   L+     P ++TY  +I+G  K G ++ A +L+  M ENG +P+ +T
Sbjct: 460 ARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLT 519

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           +  L+ GF + +++EE V LL ++ ++   +  S Y +V   + K +K    + +L+
Sbjct: 520 YSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQ 576



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/376 (27%), Positives = 186/376 (49%), Gaps = 29/376 (7%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           I++N+++G L K        +L  +M ++G  P+  T N ++  + +  + ++ +     
Sbjct: 92  ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSPNFFTLNILINCLCNVNRVREGLSAMAG 151

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            +R+G  P ++TYT LI+ +C +  I+ A  +   M   GC P++VTY +L+   C+ G 
Sbjct: 152 IMRRGYIPDVVTYTSLIKGLCMEHRISEATRLFIRMQKLGCWPNVVTYGTLIKGLCRTGN 211

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            + A+ +   +L+ G  P +I             C                 P +F+YNI
Sbjct: 212 INLALKLHQEMLN-GTSPYAIN------------C----------------KPNIFSYNI 242

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +I+ LCK G    A   FN+MV +  +PD+VT++ ++  LCKEGM+ EA + L  +    
Sbjct: 243 IIDELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRG 302

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P L T+ +LI+G    G ++ A  L+  M   G  PD I++  LI+G+C+   VEEA+
Sbjct: 303 IVPDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAM 362

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L  E+ + G       + +++ GL  + KV  A ++  ++       +  + S  +  +
Sbjct: 363 KLYNEMLRVGKWPDMKTFCVLLKGLFLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGL 422

Query: 548 ADDGMTEEAYKLWQKL 563
             +G   EA +L+ +L
Sbjct: 423 CKNGCLFEAMELFNEL 438



 Score =  124 bits (311), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/309 (23%), Positives = 143/309 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T + ++   C  G + +A K ++ M  R  +PD     +LI G   +  ++ A 
Sbjct: 268 VRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIVPDLFTFTSLIEGFCLVGDLDSAK 327

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M   G  PD I+Y +++ G CK   +  A+ L +EM   G  PD+ T+  +L+ +
Sbjct: 328 ELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCVLLKGL 387

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F  GK   A   +        P  L   ++ ++ +CK   +  A+E+ +++       DI
Sbjct: 388 FLAGKVGDAKKLFGVVKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLDI 447

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            ++N L++  CK  K + A  +   L   G++P+ +TY  +++     G  D  + +  +
Sbjct: 448 ESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQM 507

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E   +P + TY+ L++G  K   ++  +   ++M+ K+       Y  V   + K+  
Sbjct: 508 MEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQKDVSLAASIYTIVEDMVSKDEK 567

Query: 413 LNEALQLLH 421
             E L +L 
Sbjct: 568 CREWLDILQ 576



 Score =  112 bits (281), Expect = 5e-22,   Method: Compositional matrix adjust.
 Identities = 86/305 (28%), Positives = 136/305 (44%), Gaps = 46/305 (15%)

Query: 302 SCKQGKYDDA-VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
           +CK+G       L   +L+ R +    I++N LL +L     +  V  +   M+ A  SP
Sbjct: 69  NCKKGNITSTQALQFFDLMMRSI----ISFNLLLGALAKIKHYSQVFSLYKKMHLAGLSP 124

Query: 361 TVFTYNILIN-----------------------------------GLCKYGLVDRAINSF 385
             FT NILIN                                   GLC    +  A   F
Sbjct: 125 NFFTLNILINCLCNVNRVREGLSAMAGIMRRGYIPDVVTYTSLIKGLCMEHRISEATRLF 184

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-LLNGSS-----CSPCLITYNTLI 439
            +M    C P++VTY T++  LC+ G +N AL+L   +LNG+S     C P + +YN +I
Sbjct: 185 IRMQKLGCWPNVVTYGTLIKGLCRTGNINLALKLHQEMLNGTSPYAINCKPNIFSYNIII 244

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           D L K G  ++A  L+ +M++ G+ PD +T   LI   C+   V EA   L+ +  RG  
Sbjct: 245 DELCKIGKWKEAKRLFNEMVDQGVRPDVVTFSALIDTLCKEGMVIEAKKFLETMMLRGIV 304

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                +  +I G C    +D A ++   M S  Y+PD   ++ ++         EEA KL
Sbjct: 305 PDLFTFTSLIEGFCLVGDLDSAKELFLSMPSKGYEPDVISYTVLIYGYCKTFNVEEAMKL 364

Query: 560 WQKLI 564
           + +++
Sbjct: 365 YNEML 369



 Score = 79.7 bits (195), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 54/220 (24%), Positives = 111/220 (50%), Gaps = 7/220 (3%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFH-FCINLIRGL 162
           S+PS      E D  +   ++  +C    + +A KL + M R  + PD   FC+ L++GL
Sbjct: 332 SMPSKG---YEPDVISYTVLIYGYCKTFNVEEAMKLYNEMLRVGKWPDMKTFCV-LLKGL 387

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITY-NMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
               ++  A K+  + V    VP  +   ++ + GLCK G +  A+ L +E+     + D
Sbjct: 388 FLAGKVGDAKKLFGV-VKPHAVPKNLYICSVFLDGLCKNGCLFEAMELFNELKSYNMKLD 446

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           + ++N ++  +    K + A   ++   ++G  P ++TY I+I   CK   +  A  +  
Sbjct: 447 IESFNCLIDGLCKARKLETAWELFEKLSQEGLQPDVVTYCIMINGFCKNGQVDNANILFQ 506

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            M   GC+P+++TY++L++   K  K ++ V +++ ++ +
Sbjct: 507 MMEENGCTPNLLTYSALLHGFYKNNKLEEVVKLLHKMIQK 546



 Score = 77.4 bits (189), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/164 (26%), Positives = 78/164 (47%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            L   C  G L +A +L + +   N   D      LI GL +  ++E A ++ + +   G
Sbjct: 418 FLDGLCKNGCLFEAMELFNELKSYNMKLDIESFNCLIDGLCKARKLETAWELFEKLSQEG 477

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD +TY +M+ G CK GQ+ +A  L   M  +GC P+++TY+ +L   + N K ++ +
Sbjct: 478 LQPDVVTYCIMINGFCKNGQVDNANILFQMMEENGCTPNLLTYSALLHGFYKNNKLEEVV 537

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
                 ++K        YTI+ + V K       +++L    ++
Sbjct: 538 KLLHKMIQKDVSLAASIYTIVEDMVSKDEKCREWLDILQRFPVQ 581


>gi|449502431|ref|XP_004161638.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 646

 Score =  197 bits (500), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 248/506 (49%), Gaps = 66/506 (13%)

Query: 104 SLP--SSDGPFVENDEKTNNKILQNFCSRG--KLTDAS--KLIDIMARRNQIPDFHFCIN 157
           SLP  S+  P  +N+   + +I ++    G  KL DA+  +LI+  A   +   FHF   
Sbjct: 30  SLPLSSNSTPDAQNELSISPQIFKSRPQFGSYKLGDATFYRLIENYATSRE---FHFIHQ 86

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR-SAIALLDEMSVS 216
           ++      DR+++  +VL           T T  +++   C +  +   A+     M+  
Sbjct: 87  VL------DRMKREGRVL-----------TETIFILIFKACGKAHLPGEAVNFFHRMAND 129

Query: 217 -GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL---RKGCPPYLITYTILIEQVCKQCG 272
             C+  V ++N++L  +   G F  A  F+        KG  P L+TY ++I+ +CK   
Sbjct: 130 LHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQ 189

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           I RA++   +M ++ C+PD+ TY++L+N  CK+ + D+AV +++ + + G  PN +T+N 
Sbjct: 190 IDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNV 249

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L+ +L   G      K++D M      P   TYN LI+GLC  G +D+A++   +MVS  
Sbjct: 250 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 309

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C P+ VTY T++  L K+    + + +L  +           Y++LI GL K+G  E A+
Sbjct: 310 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 369

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG--------------- 497
            L+ +M E G  P+ + +   I G CR ++ +EA D+L+E+  +G               
Sbjct: 370 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 429

Query: 498 ------------------NKMRNSAY--RLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
                               MR++     ++++GLC+S ++  A+ V   M+    KPD 
Sbjct: 430 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 489

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
             +S+++K + D G  ++  KL+ ++
Sbjct: 490 VAYSSMIKGLCDVGSVDKGLKLFYEM 515



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 194/381 (50%), Gaps = 2/381 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+ L ++ +I++A    + M +    PD  TY+ ++ GLCK  ++  A+ LLDEM   G
Sbjct: 180 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 239

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C P+ +T+N ++  +  NG   +A     +   KGC P  +TY  LI  +C +  + +A+
Sbjct: 240 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 299

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L+ M    C P+ VTY +++N   KQ + +D V ++ ++  RG + N   Y++L+  L
Sbjct: 300 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 359

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +   ++   M E    P V  Y   I+GLC+    D A +   +M+SK   P+ 
Sbjct: 360 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 419

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            TY++++    K+G   +A+ +   +        ++  + L++GL + G + +A+ ++  
Sbjct: 420 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 479

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKS 515
           M+  G+ PD + + ++I G C    V++ + L  E+  +  K R     Y ++ + LC+ 
Sbjct: 480 MLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQ 539

Query: 516 KKVDMAIQVLELMISSRYKPD 536
             +  AI +L  M+     PD
Sbjct: 540 DNLTRAIDLLNSMLDEGCDPD 560



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 2/381 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I++  C  G++  A      M  +N  PD      L+ GL +  R+++A  +L  M
Sbjct: 176 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 235

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +P+ +T+N+++  L K G +  A  L+D M + GC P+ +TYNT++  +   GK 
Sbjct: 236 QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 295

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+   +  +   C P  +TY  +I  + KQ      + +L  M   G   +   Y+SL
Sbjct: 296 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSL 355

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK ++AV +   +  +G +PN + Y   +  L      D  + IL  M     
Sbjct: 356 ISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGF 415

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  FTY+ L+ G  K G   +AI  + +M+S++ + ++V  + +L  LC+ G L EAL 
Sbjct: 416 LPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALT 475

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM--MENGISPDDITHRTLIWG 476
           +   + G    P ++ Y+++I GL   G ++K + L+ +M   E    PD +T+  L   
Sbjct: 476 VWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNA 535

Query: 477 FCRADQVEEAVDLLKEIGKRG 497
            CR D +  A+DLL  +   G
Sbjct: 536 LCRQDNLTRAIDLLNSMLDEG 556



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 159/314 (50%), Gaps = 38/314 (12%)

Query: 257 LITYTILIEQVCKQCGIAR----AIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDA 311
           ++T TI I  + K CG A     A+     MA +  C   + ++NS++N   ++G +   
Sbjct: 97  VLTETIFI-LIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDF--- 152

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
                          S  +   LH  G+              N     P + TYN++I  
Sbjct: 153 ---------------SYAFKFYLHVFGA--------------NSKGFQPNLLTYNLIIKA 183

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           LCK G +DRA+++F +M  KNC PD+ TY+T++  LCKE  ++EA+ LL  +    C P 
Sbjct: 184 LCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPN 243

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
            +T+N LID L+K G + +A  L   M   G  P+++T+ TLI G C   ++++A+ LL+
Sbjct: 244 PVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLE 303

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           ++           Y  +I+GL K ++ +  + +L  M     K ++ ++S+++  +  +G
Sbjct: 304 KMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEG 363

Query: 552 MTEEAYKLWQKLIE 565
            +E A +LW+++ E
Sbjct: 364 KSENAVRLWKEMAE 377



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 176/375 (46%), Gaps = 16/375 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++   C +GKL  A  L++ M     +P+      +I GL++  R E    +L
Sbjct: 278 NEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHIL 337

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G   +   Y+ ++ GL K G+  +A+ L  EM+  GC+P+V+ Y   +  +  +
Sbjct: 338 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 397

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  +A    ++ L KG  P   TY+ L++   K+    +AI V  +M  +    ++V  
Sbjct: 398 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCC 457

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM-- 353
           + L+N  C+ G+  +A+ V  ++L  G++P+ + Y++++  L   G  D   K+   M  
Sbjct: 458 SVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQC 517

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E    P V TYNIL N LC+   + RAI+  N M+ + C PD +T N  L  L +    
Sbjct: 518 QEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINP 577

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +  +L                + L+  L K+     A+ +  +M+   + P+  T   +
Sbjct: 578 PQDGRLF--------------LDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRV 623

Query: 474 IWGFCRADQVEEAVD 488
           I   C+  ++ E +D
Sbjct: 624 IQRTCKPKRIRETID 638


>gi|413915825|gb|AFW21589.1| hypothetical protein ZEAMMB73_481763 [Zea mays]
 gi|413923991|gb|AFW63923.1| hypothetical protein ZEAMMB73_685382 [Zea mays]
          Length = 953

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 128/454 (28%), Positives = 219/454 (48%), Gaps = 2/454 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +    + ++      G + +A  L   M  R  + D      L+ GL +   +  A 
Sbjct: 500 VEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAAL 559

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KV Q ++     PD + YN+ +  LC+ G+   A + L EM  +G EPD  TYNT++   
Sbjct: 560 KVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQ 619

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A+    +       P LITYT L+  + +   + +A  +L++MA  G +P  
Sbjct: 620 CREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTP 679

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +TY  ++  +C   +    +L ++ L+   G+  +   YNTL+H L   G       +LD
Sbjct: 680 LTYRRVLQ-ACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLD 738

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M     +P   T+N LI G CK   +D A  ++ QM+ +   P+I T+NT+LG L   G
Sbjct: 739 EMLGRGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAG 798

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            + EA  ++  +      P  +TY+ L+ G AKK    +A+ LY +M+  G  P   T+ 
Sbjct: 799 RIGEADTVICEMKKMGLEPNNLTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYN 858

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +LI  F +A  + +A +L  E+ +RG    +S Y ++++G  K +       +L+ M   
Sbjct: 859 SLISDFAKAGMMNQAKELFSEMKRRGVLHTSSTYDILLNGWSKLRNGTEVRILLKDMKEL 918

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +KP     S++ +  +  GMT EA +L + L +
Sbjct: 919 GFKPSKGTISSMSRAFSKPGMTWEARRLLKTLFK 952



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 123/465 (26%), Positives = 231/465 (49%), Gaps = 4/465 (0%)

Query: 105 LPSSDGPF--VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGL 162
           L SS GP   V  D  + N  L     +G    A  ++  M +R    D       + GL
Sbjct: 103 LRSSSGPQPQVAADTVSYNIFLAGLSEQGHGRLAPPVLSEMCKRGVPWDGVTMSTALVGL 162

Query: 163 IRIDRIEKASKVLQIMVMSGGVPD--TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
            R   + +A+ + +++V   G+     + +N ++ G CK   + +A+A+++ M+  G   
Sbjct: 163 SRTGLVGEAAALAEMLVRGRGIDGLGVVGWNALIDGYCKVQDMAAALAVVERMTTQGLSL 222

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           DV+ YNT++   F +G    A    +     G  P ++T+T LI + CK   I  A  + 
Sbjct: 223 DVVGYNTLVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFTLY 282

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           + M   G  PD+VT ++LV+  C+ G++ +A  +   +   G+ PN +TY T + SL   
Sbjct: 283 EGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLAKV 342

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
              +    +L  M     +  +  Y  +++ L K G ++ A +     +S N  P+ VTY
Sbjct: 343 QRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTY 402

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             ++ A C+ G ++ A Q+L  +   S SP ++T++++++GL K+GC+ KA     +M +
Sbjct: 403 TVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKD 462

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           +GI+P+ +T+ TLI GF +    E A+D+ +++   G +  N     +++GL K+  ++ 
Sbjct: 463 SGIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEE 522

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           A  + + M       D   ++T++  +   G    A K+ Q+L+E
Sbjct: 523 AEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELME 567



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 124/492 (25%), Positives = 230/492 (46%), Gaps = 37/492 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C  G +  A +++  M  ++  P+     +++ GL++   I KA+  ++ M
Sbjct: 401 TYTVLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKM 460

Query: 179 VMSGGVPDTITYNMMVGGLCK-RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
             SG  P+ +TY  ++ G  K +GQ  +A+ +  +M   G E +    ++++  +  NG 
Sbjct: 461 KDSGIAPNVVTYGTLIDGFFKCQGQ-EAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGN 519

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A   +KD   +G     + Y  L++ + K   +  A++V  ++     SPD V YN 
Sbjct: 520 IEEAEALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNV 579

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
            +N  C+ GK+ +A   +  + + G+EP+  TYNT++ +    G      K+L+ M  +S
Sbjct: 580 FINCLCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSS 639

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP---------------------- 395
             P + TY  L+ GL + G+V++A    N+M S    P                      
Sbjct: 640 IKPNLITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVIL 699

Query: 396 -------------DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                        DI  YNT++  LC  GM  +A  +L  + G   +P  IT+N LI G 
Sbjct: 700 EVHELMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGH 759

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K   ++ A   Y QM+  G+SP+  T  TL+ G   A ++ EA  ++ E+ K G +  N
Sbjct: 760 CKSSHLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNN 819

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y +++ G  K      A+++   M+S  + P  + +++++   A  GM  +A +L+ +
Sbjct: 820 LTYDILVTGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSE 879

Query: 563 LIEWKVFEKGTT 574
           +    V    +T
Sbjct: 880 MKRRGVLHTSST 891



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 127/460 (27%), Positives = 208/460 (45%), Gaps = 35/460 (7%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           ++ ++  L+  M  R    D      ++  L +  +IE+A  VL+  +     P+ +TY 
Sbjct: 344 RVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYT 403

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
           ++V   C+ G I  A  +L +M      P+V+T+++IL  +   G   +A G+ +     
Sbjct: 404 VLVDAHCRAGNIDGAEQMLLQMEEKSVSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDS 463

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P ++TY  LI+   K  G   A++V  DM  EG   +    +SLVN   K G  ++A
Sbjct: 464 GIAPNVVTYGTLIDGFFKCQGQEAALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEA 523

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             +  ++  RG+  + + Y TL+  L   G   A  K+   + E + SP    YN+ IN 
Sbjct: 524 EALFKDMGERGLLLDHVNYATLMDGLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINC 583

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           LC+ G    A +   +M +   +PD  TYNT++ A C+EG  ++AL+LL+ +  SS  P 
Sbjct: 584 LCRLGKFSEAKSFLKEMRNTGLEPDQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPN 643

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR-------------------- 471
           LITY TL+ GL + G +EKA  L  +M   G +P  +T+R                    
Sbjct: 644 LITYTTLVVGLLEAGVVEKAKYLLNEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHE 703

Query: 472 ---------------TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
                          TL+   C      +A  +L E+  RG       +  +I G CKS 
Sbjct: 704 LMMGAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSS 763

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
            +D A      M+     P+   F+T++  +   G   EA
Sbjct: 764 HLDNAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEA 803



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 131/486 (26%), Positives = 223/486 (45%), Gaps = 41/486 (8%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           +DG  VE    T+  ++  +C   ++ +A  L + M R   +PD      L+ GL R  R
Sbjct: 252 ADG--VEPSVVTHTTLIGEYCKMKRIEEAFTLYEGMVRSGVLPDVVTLSALVDGLCRDGR 309

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
             +A  + + M   G  P+ +TY   +  L K  ++  ++ LL EM   G   D++ Y T
Sbjct: 310 FSEAYALFREMDKIGVAPNHVTYCTFIDSLAKVQRVNESLGLLGEMVSRGVAMDLVMYTT 369

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC------------------- 268
           ++  +   GK ++A    +  L     P  +TYT+L++  C                   
Sbjct: 370 VMDRLGKEGKIEEAKDVLRHALSDNITPNCVTYTVLVDAHCRAGNIDGAEQMLLQMEEKS 429

Query: 269 ----------------KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN--FSCKQGKYDD 310
                           K+  IA+A   +  M   G +P++VTY +L++  F C QG+ + 
Sbjct: 430 VSPNVVTFSSILNGLVKRGCIAKAAGYMRKMKDSGIAPNVVTYGTLIDGFFKC-QGQ-EA 487

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ V  ++L  G+E N+   ++L++ L   G  +  + +   M E         Y  L++
Sbjct: 488 ALDVYRDMLHEGVEANNFIVDSLVNGLRKNGNIEEAEALFKDMGERGLLLDHVNYATLMD 547

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GL K G +  A+    +++ +N  PD V YN  +  LC+ G  +EA   L  +  +   P
Sbjct: 548 GLFKTGNMPAALKVGQELMERNLSPDAVVYNVFINCLCRLGKFSEAKSFLKEMRNTGLEP 607

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
              TYNT+I    ++G   KA+ L  +M  + I P+ IT+ TL+ G   A  VE+A  LL
Sbjct: 608 DQATYNTMISAQCREGNTSKALKLLNEMKWSSIKPNLITYTTLVVGLLEAGVVEKAKYLL 667

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+   G       YR V+     S+   + ++V ELM+ +    D TV++T+V  +   
Sbjct: 668 NEMASAGFTPTPLTYRRVLQACSGSRSPYVILEVHELMMGAGLHADITVYNTLVHVLCCH 727

Query: 551 GMTEEA 556
           GMT +A
Sbjct: 728 GMTRKA 733



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 105/450 (23%), Positives = 190/450 (42%), Gaps = 56/450 (12%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP- 185
           F   G+L+ AS ++  +      P       LI  L     +  AS+          VP 
Sbjct: 29  FLRAGRLSAASHVVSSLP---APPPARLLRRLIPALASSGLVAAASRFRP-------VPG 78

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP----DVITYNTILRTMFDNGKFKQA 241
           D +T N ++   C    +R A++LL   S SG +P    D ++YN  L  + + G  + A
Sbjct: 79  DPLTLNSIILSYCSLHALRPALSLLR--SSSGPQPQVAADTVSYNIFLAGLSEQGHGRLA 136

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD---IVTYNSL 298
                +  ++G P   +T +  +  + +  G+      L +M + G   D   +V +N+L
Sbjct: 137 PPVLSEMCKRGVPWDGVTMSTALVGLSR-TGLVGEAAALAEMLVRGRGIDGLGVVGWNAL 195

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK      A+ V+  + ++G+  + + YNT                          
Sbjct: 196 IDGYCKVQDMAAALAVVERMTTQGLSLDVVGYNT-------------------------- 229

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                    L+ G    G  D A     +M +   +P +VT+ T++G  CK   + EA  
Sbjct: 230 ---------LVAGFFYSGDADAAWEVAERMKADGVEPSVVTHTTLIGEYCKMKRIEEAFT 280

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +  S   P ++T + L+DGL + G   +A  L+ +M + G++P+ +T+ T I    
Sbjct: 281 LYEGMVRSGVLPDVVTLSALVDGLCRDGRFSEAYALFREMDKIGVAPNHVTYCTFIDSLA 340

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  +V E++ LL E+  RG  M    Y  V+  L K  K++ A  VL   +S    P+  
Sbjct: 341 KVQRVNESLGLLGEMVSRGVAMDLVMYTTVMDRLGKEGKIEEAKDVLRHALSDNITPNCV 400

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            ++ +V      G  + A ++  ++ E  V
Sbjct: 401 TYTVLVDAHCRAGNIDGAEQMLLQMEEKSV 430



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 57/237 (24%), Positives = 103/237 (43%), Gaps = 1/237 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D    N ++   C  G    A+ ++D M  R   PD      LI G  +   ++
Sbjct: 707 GAGLHADITVYNTLVHVLCCHGMTRKATIVLDEMLGRGIAPDTITFNALILGHCKSSHLD 766

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A      M+  G  P+  T+N ++GGL   G+I  A  ++ EM   G EP+ +TY+ ++
Sbjct: 767 NAFATYAQMLHQGLSPNIATFNTLLGGLESAGRIGEADTVICEMKKMGLEPNNLTYDILV 826

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                     +A+  + + + KG  P   TY  LI    K   + +A E+  +M   G  
Sbjct: 827 TGYAKKSNKVEALRLYCEMVSKGFIPKASTYNSLISDFAKAGMMNQAKELFSEMKRRGVL 886

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDA 345
               TY+ L+N   K     +  +++ ++   G +P+  T +++  +    G  W+A
Sbjct: 887 HTSSTYDILLNGWSKLRNGTEVRILLKDMKELGFKPSKGTISSMSRAFSKPGMTWEA 943


>gi|90657590|gb|ABD96889.1| hypothetical protein [Cleome spinosa]
          Length = 719

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 114/427 (26%), Positives = 204/427 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T NK++  FC        S+++  M  RN +P  +    +I GL + +   +A +V   +
Sbjct: 265 TYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIINGLCKNEECLEAYRVFNDL 324

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD + Y  M+ GLC+ G    A  L  EM   G +P+  TYNT+L     +G F
Sbjct: 325 KDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQPNAYTYNTMLHGSLKSGDF 384

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A   + +   KG     +T   +I ++C +     A EV   M+  G   D +TYNSL
Sbjct: 385 ERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEVFKKMSETGIQADAITYNSL 444

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK+GK D+ + ++N L+++  +P+   Y  L+      G ++A  ++L  M+    
Sbjct: 445 IRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGL 504

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  +TY+ +++G  K G  +     +N+  +K       T N ++  LC  G  +EA +
Sbjct: 505 HPNAYTYDTMLHGSLKSGDFEHVRELYNETCNKGYGTTTATCNKIISELCSRGKSDEASE 564

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   ++ +      ITYN+LI G  K+G + K+M L  +++  G+ P   ++ +LI   C
Sbjct: 565 MFKKMSETGIKADAITYNSLIRGFCKEGKVGKSMNLLNELVAQGLQPSASSYASLIIQLC 624

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +    E A  L  ++  +G +   +    +I GLCK  +    +  L  M+ ++ KP   
Sbjct: 625 QNGDAESAKRLWGDMVSKGIEPHANLREHLISGLCKQGRATEGMDRLMGMLENKIKPKKA 684

Query: 539 VFSTIVK 545
            F  + +
Sbjct: 685 AFEDLAE 691



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 209/449 (46%), Gaps = 6/449 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++Q FC  G++    +L++   +    P       LI G  +       S+VL  M+   
Sbjct: 234 LIQAFCDSGQVARGYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARN 293

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +P   TY  ++ GLCK  +   A  + +++   G  PD + Y T++  + + G F +A 
Sbjct: 294 HLPTIYTYQEIINGLCKNEECLEAYRVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEAR 353

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             W + + KG  P   TY  ++    K     RA E+ ++M  +G     VT N +++  
Sbjct: 354 KLWFEMMDKGMQPNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISEL 413

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE---ASHS 359
           C +GK D+A  V   +   G++ ++ITYN+L+      G    VD+ ++++NE       
Sbjct: 414 CSRGKSDEAFEVFKKMSETGIQADAITYNSLIRGFCKEG---KVDERMNLLNELVAQDPQ 470

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P+V  Y +LI   CK G  + A      M SK   P+  TY+T+L    K G      +L
Sbjct: 471 PSVSLYELLIIKSCKDGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVREL 530

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            +            T N +I  L  +G  ++A  ++ +M E GI  D IT+ +LI GFC+
Sbjct: 531 YNETCNKGYGTTTATCNKIISELCSRGKSDEASEMFKKMSETGIKADAITYNSLIRGFCK 590

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             +V ++++LL E+  +G +   S+Y  +I  LC++   + A ++   M+S   +P   +
Sbjct: 591 EGKVGKSMNLLNELVAQGLQPSASSYASLIIQLCQNGDAESAKRLWGDMVSKGIEPHANL 650

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              ++  +   G   E       ++E K+
Sbjct: 651 REHLISGLCKQGRATEGMDRLMGMLENKI 679



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/408 (26%), Positives = 190/408 (46%), Gaps = 7/408 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L   L+    +  A  V  I   +G +PD+ +    V  LC  G I  AI +  ++  +G
Sbjct: 130 LFEALLDAKAVRAAKMVRDI---AGFIPDSASLEQYVKCLCGVGFIEEAIEVYFQLKEAG 186

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI--LIEQVCKQCGIAR 275
               ++  N+IL      GK +    F+++ ++ G      T T+  LI+  C    +AR
Sbjct: 187 IRISIVACNSILSGCLKAGKTELLFEFYQEMIKAGTASDANTETVGCLIQAFCDSGQVAR 246

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
             E+L+     G  P   TYN L+   C+   Y     V++ +++R   P   TY  +++
Sbjct: 247 GYELLNQFLKTGLDPGNPTYNKLIAGFCQAKNYASMSEVLHTMIARNHLPTIYTYQEIIN 306

Query: 336 SL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            L  +  C +A  ++ + + +  ++P    Y  +I+GLC+ G    A   + +M+ K  Q
Sbjct: 307 GLCKNEECLEAY-RVFNDLKDRGYAPDRVMYTTMIHGLCEMGSFGEARKLWFEMMDKGMQ 365

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+  TYNT+L    K G    A +L + +         +T N +I  L  +G  ++A  +
Sbjct: 366 PNAYTYNTMLHGSLKSGDFERACELYNEMCNKGYGTTTVTCNKIISELCSRGKSDEAFEV 425

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M E GI  D IT+ +LI GFC+  +V+E ++LL E+  +  +   S Y L+I   CK
Sbjct: 426 FKKMSETGIQADAITYNSLIRGFCKEGKVDERMNLLNELVAQDPQPSVSLYELLIIKSCK 485

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
               + A ++L  M S    P+   + T++      G  E   +L+ +
Sbjct: 486 DGDFEAAKRLLGDMSSKGLHPNAYTYDTMLHGSLKSGDFEHVRELYNE 533


>gi|356544378|ref|XP_003540629.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Glycine max]
          Length = 903

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 121/426 (28%), Positives = 215/426 (50%), Gaps = 3/426 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE    T   ++  +C   ++  A KL + M      P+ +    LI GL   +++ +AS
Sbjct: 466 VEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEAS 525

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   +V     P  +TYN+++ G C+ G+I  A  LL++M   G  PD  TY  ++  +
Sbjct: 526 ELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGL 585

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  +A  F  D  ++      + Y+ L+   C++  +  A+    +M   G + D+
Sbjct: 586 CSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDL 645

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V +  L++ + KQ        ++ ++  +G+ P+++ Y +++ +    G +    +  D+
Sbjct: 646 VCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDL 705

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P V TY  L+NGLCK G +DRA   F +M + N  P+ +TY   L  L KEG 
Sbjct: 706 MVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGN 765

Query: 413 LNEALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
           + EA+ L H +L G   +   +T+N +I G  K G   +A  +  +M ENGI PD +T+ 
Sbjct: 766 MKEAIGLHHAMLKGLLANT--VTHNIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYS 823

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           TLI+ +CR+  V  +V L   +  RG +    AY L+I+G C + ++D A ++ + M+  
Sbjct: 824 TLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAYNLLIYGCCVNGELDKAFELRDDMLRR 883

Query: 532 RYKPDD 537
              PD+
Sbjct: 884 GIIPDN 889



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 211/436 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++QN+    ++ DA  ++ +M   N +P+      L+ GL+++ +     ++    V 
Sbjct: 159 NLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFDESVN 218

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PD  T + +V  +C+      A   +  M  +G +  ++TYN ++  +    +  +
Sbjct: 219 AGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGDRVSE 278

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +    KG    ++TY  L+   C+       I+++D+M   G SP     + LV+
Sbjct: 279 AVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVD 338

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              KQGK DDA  ++  +   G  PN   YN L++SL   G  D  + +   M+  +  P
Sbjct: 339 GLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRP 398

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TY+ILI+  C+ G +D AI+ F++M+       +  YN+++   CK G L+ A  L 
Sbjct: 399 NGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLF 458

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P   T+ +LI G  K   ++KA  LY +M++NGI+P+  T   LI G C  
Sbjct: 459 IEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCST 518

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           +++ EA +L  E+ +R  K     Y ++I G C+  K+D A ++LE M      PD   +
Sbjct: 519 NKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTY 578

Query: 541 STIVKKVADDGMTEEA 556
             ++  +   G   +A
Sbjct: 579 RPLISGLCSTGRVSKA 594



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/448 (26%), Positives = 220/448 (49%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T + +L       K     +L D        PD + C  ++R +  +    +A + ++ 
Sbjct: 191 RTLSALLNGLLKVRKFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRW 250

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  +G     +TYN+++ GLCK  ++  A+ +   +   G   DV+TY T++       +
Sbjct: 251 MEANGFDLSIVTYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQ 310

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F+  I    + +  G  P     + L++ + KQ  I  A E++  +   G  P++  YN+
Sbjct: 311 FEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNA 370

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK G  D A L+ +N+    + PN ITY+ L+ S    G  D      D M +  
Sbjct: 371 LINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDG 430

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
              TV+ YN LING CK+G +  A + F +M +K  +P   T+ +++   CK+  + +A 
Sbjct: 431 IGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAF 490

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +L + +  +  +P + T+  LI GL     M +A  L+ +++E  I P ++T+  LI G+
Sbjct: 491 KLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGY 550

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           CR  ++++A +LL+++ ++G       YR +I GLC + +V  A   ++ +     K ++
Sbjct: 551 CRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNE 610

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +S ++     +G   EA     ++I+
Sbjct: 611 MCYSALLHGYCQEGRLMEALSASCEMIQ 638



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 108/444 (24%), Positives = 220/444 (49%), Gaps = 1/444 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G L+ A  L   M  +   P      +LI G  +  +++KA K+   M+ 
Sbjct: 439 NSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID 498

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P+  T+  ++ GLC   ++  A  L DE+     +P  +TYN ++     +GK  +
Sbjct: 499 NGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDK 558

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    +D  +KG  P   TY  LI  +C    +++A + +DD+  +    + + Y++L++
Sbjct: 559 AFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLH 618

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C++G+  +A+     ++ RG+  + + +  L+     +        +L  M++    P
Sbjct: 619 GYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRP 678

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
               Y  +I+   K G   +A   ++ MV++ C P++VTY  ++  LCK G ++ A  L 
Sbjct: 679 DNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLF 738

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  ++  P  ITY   +D L K+G M++A+ L+  M++ G+  + +TH  +I GFC+ 
Sbjct: 739 KRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTHNIIIRGFCKL 797

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +  EA  +L E+ + G       Y  +I+  C+S  V  ++++ + M++   +PD   +
Sbjct: 798 GRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTMLNRGLEPDLVAY 857

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           + ++     +G  ++A++L   ++
Sbjct: 858 NLLIYGCCVNGELDKAFELRDDML 881



 Score =  178 bits (451), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 109/459 (23%), Positives = 218/459 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   ++++A ++   +  +    D      L+ G  R+ + E   +++  M
Sbjct: 262 TYNVLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEM 321

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P     + +V GL K+G+I  A  L+ ++   G  P++  YN ++ ++   G  
Sbjct: 322 VELGFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDL 381

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   + +       P  ITY+ILI+  C+   +  AI   D M  +G    +  YNSL
Sbjct: 382 DKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSL 441

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK G    A  +   + ++G+EP + T+ +L+             K+ + M +   
Sbjct: 442 INGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGI 501

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V+T+  LI+GLC    +  A   F+++V +  +P  VTYN ++   C++G +++A +
Sbjct: 502 TPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFE 561

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  ++     P   TY  LI GL   G + KA      + +  +  +++ +  L+ G+C
Sbjct: 562 LLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYC 621

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  ++ EA+    E+ +RG  M    + ++I G  K         +L+ M     +PD+ 
Sbjct: 622 QEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNV 681

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           ++++++   + +G  ++A++ W  ++  + F    T  A
Sbjct: 682 IYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTA 720



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 117/479 (24%), Positives = 209/479 (43%), Gaps = 36/479 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++ + C  G L  A  L   M+  N  P+      LI    R  R++ A      M+ 
Sbjct: 369 NALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQ 428

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G       YN ++ G CK G + +A +L  EM+  G EP   T+ +++     + + ++
Sbjct: 429 DGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQK 488

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   +   +  G  P + T+T LI  +C    +A A E+ D++      P  VTYN L+ 
Sbjct: 489 AFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEASELFDELVERKIKPTEVTYNVLIE 548

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+ GK D A  ++ ++  +G+ P++ TY  L+  L S G        +D +++ +   
Sbjct: 549 GYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISGLCSTGRVSKAKDFIDDLHKQNVKL 608

Query: 361 TVFTYNILINGLCKYG-----------LVDRAINS------------------------F 385
               Y+ L++G C+ G           ++ R IN                          
Sbjct: 609 NEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMDLVCHAVLIDGALKQPDRKTFFDLL 668

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
             M  +  +PD V Y +++    KEG   +A +   L+    C P ++TY  L++GL K 
Sbjct: 669 KDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWDLMVTEECFPNVVTYTALMNGLCKA 728

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G M++A +L+ +M    + P+ IT+   +    +   ++EA+ L   + K G       +
Sbjct: 729 GEMDRAGLLFKRMQAANVPPNSITYGCFLDNLTKEGNMKEAIGLHHAMLK-GLLANTVTH 787

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++I G CK  +   A +VL  M  +   PD   +ST++ +    G    + KLW  ++
Sbjct: 788 NIIIRGFCKLGRFHEATKVLSEMTENGIFPDCVTYSTLIYEYCRSGNVGASVKLWDTML 846



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 113/457 (24%), Positives = 209/457 (45%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           S  G  +  D  T   ++  FC   +     +L+D M      P       L+ GL +  
Sbjct: 285 SLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVSGLVDGLRKQG 344

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYN 226
           +I+ A +++  +   G VP+   YN ++  LCK G +  A  L   MS+    P+ ITY+
Sbjct: 345 KIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLMNLRPNGITYS 404

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            ++ +   +G+   AI ++   ++ G    +  Y  LI   CK   ++ A  +  +M  +
Sbjct: 405 ILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAAESLFIEMTNK 464

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G  P   T+ SL++  CK  +   A  + N ++  G+ PN  T+  L+  L S       
Sbjct: 465 GVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISGLCSTNKMAEA 524

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            ++ D + E    PT  TYN+LI G C+ G +D+A      M  K   PD  TY  ++  
Sbjct: 525 SELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDMHQKGLVPDTYTYRPLISG 584

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           LC  G +++A   +  L+  +     + Y+ L+ G  ++G + +A+    +M++ GI+ D
Sbjct: 585 LCSTGRVSKAKDFIDDLHKQNVKLNEMCYSALLHGYCQEGRLMEALSASCEMIQRGINMD 644

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            + H  LI G  +    +   DLLK++  +G +  N  Y  +I    K      A +  +
Sbjct: 645 LVCHAVLIDGALKQPDRKTFFDLLKDMHDQGLRPDNVIYTSMIDTYSKEGSFKKAFECWD 704

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           LM++    P+   ++ ++  +   G  + A  L++++
Sbjct: 705 LMVTEECFPNVVTYTALMNGLCKAGEMDRAGLLFKRM 741



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 100/412 (24%), Positives = 189/412 (45%), Gaps = 35/412 (8%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T+ +N++V       +I  A+ ++  M  +   P+V T + +L  +    KF      + 
Sbjct: 155 TLGFNLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVRKFITVWELFD 214

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           + +  G  P   T + ++  +C+     RA E +  M   G    IVTYN L++  CK  
Sbjct: 215 ESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYNVLIHGLCKGD 274

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT----- 361
           +  +AV V  +L  +G+  + +TY TL+        ++A  +++D M E   SPT     
Sbjct: 275 RVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVELGFSPTEAAVS 334

Query: 362 ------------------------------VFTYNILINGLCKYGLVDRAINSFNQMVSK 391
                                         +F YN LIN LCK G +D+A   ++ M   
Sbjct: 335 GLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKAELLYSNMSLM 394

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
           N +P+ +TY+ ++ + C+ G L+ A+     +        +  YN+LI+G  K G +  A
Sbjct: 395 NLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLINGQCKFGDLSAA 454

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             L+ +M   G+ P   T  +LI G+C+  QV++A  L  ++   G       +  +I G
Sbjct: 455 ESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMIDNGITPNVYTFTALISG 514

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           LC + K+  A ++ + ++  + KP +  ++ +++    DG  ++A++L + +
Sbjct: 515 LCSTNKMAEASELFDELVERKIKPTEVTYNVLIEGYCRDGKIDKAFELLEDM 566



 Score =  106 bits (265), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 92/414 (22%), Positives = 174/414 (42%), Gaps = 53/414 (12%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T +Y +MV  L        A +LL  + +    P  + ++  L + +   KF   +GF  
Sbjct: 103 TTSYAIMVHALVHSRLFWPANSLLHTLLLRESHPKCV-FSHFLDS-YKRCKFSSTLGF-- 158

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
                          +L++       I  A+ ++  M      P++ T ++L+N   K  
Sbjct: 159 --------------NLLVQNYVLSSRIFDAVVIVKLMFANNLLPEVRTLSALLNGLLKVR 204

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K+     + +  ++ G+ P+  T + ++ S+     +    + +  M       ++ TYN
Sbjct: 205 KFITVWELFDESVNAGVRPDPYTCSAVVRSMCELKDFLRAKEKIRWMEANGFDLSIVTYN 264

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC------------------ 408
           +LI+GLCK   V  A+     +  K    D+VTY T++   C                  
Sbjct: 265 VLIHGLCKGDRVSEAVEVKRSLGGKGLAADVVTYCTLVLGFCRLQQFEAGIQLMDEMVEL 324

Query: 409 -----------------KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
                            K+G +++A +L+  +      P L  YN LI+ L K G ++KA
Sbjct: 325 GFSPTEAAVSGLVDGLRKQGKIDDAYELVVKVGRFGFVPNLFVYNALINSLCKGGDLDKA 384

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
            +LY  M    + P+ IT+  LI  FCR+ +++ A+     + + G      AY  +I+G
Sbjct: 385 ELLYSNMSLMNLRPNGITYSILIDSFCRSGRLDVAISYFDRMIQDGIGETVYAYNSLING 444

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            CK   +  A  +   M +   +P  T F++++     D   ++A+KL+ K+I+
Sbjct: 445 QCKFGDLSAAESLFIEMTNKGVEPTATTFTSLISGYCKDLQVQKAFKLYNKMID 498


>gi|22128589|gb|AAM52340.1| fertility restorer-like protein [Petunia x hybrida]
          Length = 591

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 231/450 (51%), Gaps = 4/450 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKV 174
           +E T   +++   +  K+ DA  L   + R N   P+      ++ GL +    +KA  +
Sbjct: 141 NEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDL 200

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L++M      P+T TY +++   CK G +  A +LL+EM      PD+ TY+T++  +  
Sbjct: 201 LRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCK 260

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             +++     + + +     P + T+  +I+ +CK+  +  A E++  M  +G  PD++T
Sbjct: 261 LSQWENVRTLFLEMIHLNIYPNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVIT 320

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN +++    +G+ D A  + ++++++ +EP+ I+YN L++    +   D   ++   ++
Sbjct: 321 YNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREIS 380

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P++ T N+L++GL + G    A N F++M+S    PD+ T+ T+LG   K G++ 
Sbjct: 381 QKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVE 440

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA+   H L        +  Y  +IDGL K G ++KA   + ++   G+ PD IT+  +I
Sbjct: 441 EAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMI 500

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C+   ++EA D+L+++   G    N  Y +++ G  +S KV      LE +    + 
Sbjct: 501 SGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGFLRSNKVSEMKAFLEEIAGKSFS 560

Query: 535 PDDTVFSTIVKKVADD-GMTEEAYKLWQKL 563
            +      ++  +A+D  +T + +  W KL
Sbjct: 561 FEAATVELLMDIIAEDPSITRKMH--WIKL 588



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 110/418 (26%), Positives = 212/418 (50%), Gaps = 2/418 (0%)

Query: 148 QIPDFHFCINLI-RGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
           +IP   F ++++      + R +    VL I    G   + +T+  ++ GL    +++ A
Sbjct: 102 RIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDA 161

Query: 207 IALLDEMSVSG-CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           + L  ++     CEP+ + Y T++  +   G  ++A    +   +    P   TYTI+I+
Sbjct: 162 VHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVID 221

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
             CK   +  A  +L++M  +   PDI TY++L++  CK  ++++   +   ++   + P
Sbjct: 222 AFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIYP 281

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N  T+N+++  L   G  +  ++I+  M E    P V TYN++I+G    G VDRA   F
Sbjct: 282 NVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIF 341

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           + M++K+ +PDI++YN ++    ++  ++EA+Q+   ++     P ++T N L+ GL + 
Sbjct: 342 DSMINKSIEPDIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFEL 401

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G  + A   + +M+  G  PD  TH TL+ G+ +   VEEA+    ++ +R        Y
Sbjct: 402 GRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGYFKNGLVEEAMSHFHKLERRREDTNIQIY 461

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             VI GLCK+ K+D A    E +      PD   ++ ++     +G+ +EA  + +K+
Sbjct: 462 TAVIDGLCKNGKLDKAHATFEKLPLIGLHPDVITYTAMISGYCQEGLLDEAKDMLRKM 519



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/364 (26%), Positives = 181/364 (49%), Gaps = 9/364 (2%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIE 265
           A +L  +M  +   P V +++ +L+ M     +   +  +++  +   P +    +I++ 
Sbjct: 56  AFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILSIVVN 115

Query: 266 QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM-E 324
             C          VL     +G   + VT+ +L+     + K  DAV +   L+   + E
Sbjct: 116 SCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRENICE 175

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           PN + Y T+++ L  +G       +L +M + S  P   TY I+I+  CK G++D A + 
Sbjct: 176 PNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSL 235

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCK----EGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
            N+M  K+  PDI TY+T++ ALCK    E +    L+++HL    +  P + T+N++ID
Sbjct: 236 LNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHL----NIYPNVCTFNSVID 291

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GL K+G +E A  +   M+E G+ PD IT+  +I G+    QV+ A ++   +  +  + 
Sbjct: 292 GLCKEGKVEDAEEIMRYMIEKGVDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEP 351

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              +Y ++I+G  + KK+D A+QV   +     KP     + ++  + + G T+ A   +
Sbjct: 352 DIISYNILINGYARQKKIDEAMQVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFF 411

Query: 561 QKLI 564
            +++
Sbjct: 412 DEML 415



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 61/225 (27%), Positives = 117/225 (52%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N I+  +  RG++  A ++ D M  ++  PD      LI G  R  +I++A 
Sbjct: 314 VDPDVITYNMIIDGYGLRGQVDRAREIFDSMINKSIEPDIISYNILINGYARQKKIDEAM 373

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V + +   G  P  +T N+++ GL + G+ +SA    DEM  +G  PD+ T+ T+L   
Sbjct: 374 QVCREISQKGLKPSIVTCNVLLHGLFELGRTKSAQNFFDEMLSAGHIPDLYTHCTLLGGY 433

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F NG  ++A+  +    R+     +  YT +I+ +CK   + +A    + + + G  PD+
Sbjct: 434 FKNGLVEEAMSHFHKLERRREDTNIQIYTAVIDGLCKNGKLDKAHATFEKLPLIGLHPDV 493

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +TY ++++  C++G  D+A  ++  +   G   ++ TYN ++   
Sbjct: 494 ITYTAMISGYCQEGLLDEAKDMLRKMEDNGCLADNRTYNVIVRGF 538



 Score = 79.3 bits (194), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 61/274 (22%), Positives = 120/274 (43%), Gaps = 5/274 (1%)

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N   N  C     DDA  +   ++     P+  +++ LL ++     + +V  +   +++
Sbjct: 45  NEFQNVKC----LDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHK 100

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                  F  +I++N  C     D   +       K    + VT+ T++  L  E  + +
Sbjct: 101 LRIPVHEFILSIVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKD 160

Query: 416 ALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           A+ L   L+  + C P  + Y T+++GL KKG  +KA  L   M +    P+  T+  +I
Sbjct: 161 AVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLRLMEQGSTKPNTRTYTIVI 220

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             FC+   ++ A  LL E+ ++        Y  +I  LCK  + +    +   MI     
Sbjct: 221 DAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLSQWENVRTLFLEMIHLNIY 280

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           P+   F++++  +  +G  E+A ++ + +IE  V
Sbjct: 281 PNVCTFNSVIDGLCKEGKVEDAEEIMRYMIEKGV 314



 Score = 62.0 bits (149), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 35/138 (25%), Positives = 69/138 (50%), Gaps = 1/138 (0%)

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMM-ENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           +T+ TLI GL  +  ++ A+ L+ +++ EN   P+++ + T++ G C+    ++A DLL+
Sbjct: 143 VTFTTLIRGLFAENKVKDAVHLFKKLVRENICEPNEVMYGTVMNGLCKKGHTQKAFDLLR 202

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            + +   K     Y +VI   CK   +D A  +L  M      PD   +ST++  +    
Sbjct: 203 LMEQGSTKPNTRTYTIVIDAFCKDGMLDGATSLLNEMKQKSIPPDIFTYSTLIDALCKLS 262

Query: 552 MTEEAYKLWQKLIEWKVF 569
             E    L+ ++I   ++
Sbjct: 263 QWENVRTLFLEMIHLNIY 280



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 24/124 (19%), Positives = 52/124 (41%)

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
           C++ A  L+ QM+     P   +   L+            V L +EI K    +      
Sbjct: 52  CLDDAFSLFRQMVRTKPLPSVASFSKLLKAMVHMKHYSSVVSLFREIHKLRIPVHEFILS 111

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           +V++  C   + D+   VL +        ++  F+T+++ +  +   ++A  L++KL+  
Sbjct: 112 IVVNSCCLMHRTDLGFSVLAIHFKKGIPYNEVTFTTLIRGLFAENKVKDAVHLFKKLVRE 171

Query: 567 KVFE 570
            + E
Sbjct: 172 NICE 175


>gi|255581046|ref|XP_002531339.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223529061|gb|EEF31046.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 630

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 126/421 (29%), Positives = 222/421 (52%), Gaps = 26/421 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N +++  C   ++  A  +++ M+    +PD      L++G I    ++ A 
Sbjct: 189 IKPDVSTFNILIKALCKAHQIRPAILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAF 248

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V + M+ +G     +T N++V G CK G+I  A++ +DEMS                  
Sbjct: 249 RVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFIDEMS------------------ 290

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            + GK   AI  + +   KGC P   TY +LI+ +C +  +  A+ +L +M I GC+ ++
Sbjct: 291 -NEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNV 349

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILD 351
           +TYN+L++  CK  K ++A  + + +  +G+  NS+TYNTL+  L  SR   +A  +++D
Sbjct: 350 ITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAA-QLMD 408

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M      P  FTYN ++   C+ G + +A +    M S  C+PDIVTY T++G LCK G
Sbjct: 409 QMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAG 468

Query: 412 MLNEALQLLH--LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            +  A +LL    L G   +P    YN +I  L K+   ++AM L+ +M E G +PD  T
Sbjct: 469 RVEVASRLLRSIQLKGMVLTPH--AYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFT 526

Query: 470 HRTLIWGFCRA-DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           ++ +  G   +   + EAVD + E+ ++G     S++ ++  GLC     D  I++++L+
Sbjct: 527 YKIVFRGLSNSGGPIGEAVDFVIEMIEKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLV 586

Query: 529 I 529
           +
Sbjct: 587 M 587



 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 130/446 (29%), Positives = 216/446 (48%), Gaps = 28/446 (6%)

Query: 152 FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLD 211
           ++F +N+   L+  ++++    V   MV  G  PD  T+N+++  LCK  QIR AI +++
Sbjct: 161 YNFLLNV---LVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPAILVME 217

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           EMS  G  PD  T+ T+++   + G    A    +  L  GCP   +T  +L+   CK+ 
Sbjct: 218 EMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEG 277

Query: 272 GIARAIEVLDDM--------AIE--------GCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            I  A+  +D+M        AIE        GC PD  TYN L++  C +GK  +A+ ++
Sbjct: 278 RIEEALSFIDEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLL 337

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
             +   G   N ITYNTL+         +  ++I D M     S    TYN LI+GLCK 
Sbjct: 338 REMEISGCARNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKS 397

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
             V  A    +QM+ +  +PD  TYN++L   C+EG + +A  ++  +  + C P ++TY
Sbjct: 398 RRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTY 457

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
            TLI GL K G +E A  L   +   G+      +  +I    +  + +EA+ L +E+ +
Sbjct: 458 GTLIGGLCKAGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEE 517

Query: 496 RGNKMRNSAYRLVIHGLCKS-----KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +GN      Y++V  GL  S     + VD  I+    MI   + P+ + F  + + +   
Sbjct: 518 KGNTPDAFTYKIVFRGLSNSGGPIGEAVDFVIE----MIEKGFLPEFSSFYMLAEGLCSL 573

Query: 551 GMTEEAYKLWQKLIEWKVFEKGTTLL 576
            M +   KL   ++E   F +   ++
Sbjct: 574 SMEDTLIKLVDLVMEKANFSQNEVVM 599



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 172/348 (49%), Gaps = 21/348 (6%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G   D + YN +L  + D  K K         + KG  P + T+ ILI+ +CK   I  A
Sbjct: 153 GLALDTLLYNFLLNVLVDGNKLKLVENVHSTMVSKGIKPDVSTFNILIKALCKAHQIRPA 212

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           I V+++M+  G  PD  T+ +L+    ++G  D A  V   +L  G    ++T N L+H 
Sbjct: 213 ILVMEEMSSYGLVPDEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHG 272

Query: 337 LGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               G   +A+  I ++ NE  H+                     AI  +N+M +K CQP
Sbjct: 273 FCKEGRIEEALSFIDEMSNEGKHT--------------------MAIELYNEMKNKGCQP 312

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D  TYN ++ +LC  G L EAL LL  +  S C+  +ITYNTLIDG  K   +E+A  ++
Sbjct: 313 DEFTYNMLIDSLCYRGKLQEALGLLREMEISGCARNVITYNTLIDGFCKNKKIEEAEEIF 372

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            QM   G+S + +T+ TLI G C++ +V+EA  L+ ++   G K     Y  ++   C+ 
Sbjct: 373 DQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQLMDQMIMEGLKPDKFTYNSMLTYFCRE 432

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             +  A  +++ M S+  +PD   + T++  +   G  E A +L + +
Sbjct: 433 GDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCKAGRVEVASRLLRSI 480



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 183/433 (42%), Gaps = 52/433 (12%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DEKT   ++Q F   G +  A ++ + M              L+ G  +  RIE+A   +
Sbjct: 227 DEKTFTTLMQGFIEEGNMDGAFRVKEQMLDAGCPVTNVTVNVLVHGFCKEGRIEEALSFI 286

Query: 176 QIMVMSGG----------------VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE 219
             M   G                  PD  TYNM++  LC RG+++ A+ LL EM +SGC 
Sbjct: 287 DEMSNEGKHTMAIELYNEMKNKGCQPDEFTYNMLIDSLCYRGKLQEALGLLREMEISGCA 346

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
            +VITYNT++     N K ++A   +     +G     +TY  LI+ +CK   +  A ++
Sbjct: 347 RNVITYNTLIDGFCKNKKIEEAEEIFDQMEIQGLSRNSVTYNTLIDGLCKSRRVQEAAQL 406

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           +D M +EG  PD  TYNS++ + C++G    A  ++  + S G EP+ +TY TL+  L  
Sbjct: 407 MDQMIMEGLKPDKFTYNSMLTYFCREGDIQKAADIVQTMTSNGCEPDIVTYGTLIGGLCK 466

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G  +   ++L  +       T   YN +I  L K      A+  F +M  K   PD  T
Sbjct: 467 AGRVEVASRLLRSIQLKGMVLTPHAYNPVIQALFKRKRTKEAMRLFREMEEKGNTPDAFT 526

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  V   L   G                                  G + +A+    +M+
Sbjct: 527 YKIVFRGLSNSG----------------------------------GPIGEAVDFVIEMI 552

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           E G  P+  +   L  G C     +  + L+  + ++ N  +N    ++I G  K +K  
Sbjct: 553 EKGFLPEFSSFYMLAEGLCSLSMEDTLIKLVDLVMEKANFSQNEV--VMIRGFLKIRKFQ 610

Query: 520 MAIQVLELMISSR 532
            A+  L  ++ SR
Sbjct: 611 DALATLGGLLDSR 623


>gi|449455320|ref|XP_004145401.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
 gi|449471531|ref|XP_004153336.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g20090-like [Cucumis sativus]
          Length = 670

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 137/506 (27%), Positives = 248/506 (49%), Gaps = 66/506 (13%)

Query: 104 SLP--SSDGPFVENDEKTNNKILQNFCSRG--KLTDAS--KLIDIMARRNQIPDFHFCIN 157
           SLP  S+  P  +N+   + +I ++    G  KL DA+  +LI+  A   +   FHF   
Sbjct: 54  SLPLSSNSTPDAQNELSISPQIFKSRPQFGSYKLGDATFYRLIENYATSRE---FHFIHQ 110

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR-SAIALLDEMSVS 216
           ++      DR+++  +VL           T T  +++   C +  +   A+     M+  
Sbjct: 111 VL------DRMKREGRVL-----------TETIFILIFKACGKAHLPGEAVNFFHRMAND 153

Query: 217 -GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL---RKGCPPYLITYTILIEQVCKQCG 272
             C+  V ++N++L  +   G F  A  F+        KG  P L+TY ++I+ +CK   
Sbjct: 154 LHCKQTVKSFNSVLNVIIQEGDFSYAFKFYLHVFGANSKGFQPNLLTYNLIIKALCKLGQ 213

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           I RA++   +M ++ C+PD+ TY++L+N  CK+ + D+AV +++ + + G  PN +T+N 
Sbjct: 214 IDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPNPVTFNV 273

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L+ +L   G      K++D M      P   TYN LI+GLC  G +D+A++   +MVS  
Sbjct: 274 LIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLEKMVSSK 333

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C P+ VTY T++  L K+    + + +L  +           Y++LI GL K+G  E A+
Sbjct: 334 CVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEGKSENAV 393

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG--------------- 497
            L+ +M E G  P+ + +   I G CR ++ +EA D+L+E+  +G               
Sbjct: 394 RLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNAFTYSSLMKGF 453

Query: 498 ------------------NKMRNSAY--RLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
                               MR++     ++++GLC+S ++  A+ V   M+    KPD 
Sbjct: 454 FKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTHMLGEGLKPDV 513

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
             +S+++K + D G  ++  KL+ ++
Sbjct: 514 VAYSSMIKGLCDVGSVDKGLKLFYEM 539



 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 102/381 (26%), Positives = 194/381 (50%), Gaps = 2/381 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+ L ++ +I++A    + M +    PD  TY+ ++ GLCK  ++  A+ LLDEM   G
Sbjct: 204 IIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEG 263

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C P+ +T+N ++  +  NG   +A     +   KGC P  +TY  LI  +C +  + +A+
Sbjct: 264 CLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAL 323

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L+ M    C P+ VTY +++N   KQ + +D V ++ ++  RG + N   Y++L+  L
Sbjct: 324 SLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGL 383

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +   ++   M E    P V  Y   I+GLC+    D A +   +M+SK   P+ 
Sbjct: 384 FKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGFLPNA 443

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
            TY++++    K+G   +A+ +   +        ++  + L++GL + G + +A+ ++  
Sbjct: 444 FTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALTVWTH 503

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKS 515
           M+  G+ PD + + ++I G C    V++ + L  E+  +  K R     Y ++ + LC+ 
Sbjct: 504 MLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNALCRQ 563

Query: 516 KKVDMAIQVLELMISSRYKPD 536
             +  AI +L  M+     PD
Sbjct: 564 DNLTRAIDLLNSMLDEGCDPD 584



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 109/381 (28%), Positives = 189/381 (49%), Gaps = 2/381 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I++  C  G++  A      M  +N  PD      L+ GL +  R+++A  +L  M
Sbjct: 200 TYNLIIKALCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEM 259

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +P+ +T+N+++  L K G +  A  L+D M + GC P+ +TYNT++  +   GK 
Sbjct: 260 QAEGCLPNPVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKL 319

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+   +  +   C P  +TY  +I  + KQ      + +L  M   G   +   Y+SL
Sbjct: 320 DKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSL 379

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K+GK ++AV +   +  +G +PN + Y   +  L      D  + IL  M     
Sbjct: 380 ISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRDEKPDEAEDILQEMLSKGF 439

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  FTY+ L+ G  K G   +AI  + +M+S++ + ++V  + +L  LC+ G L EAL 
Sbjct: 440 LPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCCSVLLNGLCESGRLREALT 499

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM--MENGISPDDITHRTLIWG 476
           +   + G    P ++ Y+++I GL   G ++K + L+ +M   E    PD +T+  L   
Sbjct: 500 VWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQCQEPKSRPDVVTYNILFNA 559

Query: 477 FCRADQVEEAVDLLKEIGKRG 497
            CR D +  A+DLL  +   G
Sbjct: 560 LCRQDNLTRAIDLLNSMLDEG 580



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 90/314 (28%), Positives = 159/314 (50%), Gaps = 38/314 (12%)

Query: 257 LITYTILIEQVCKQCGIAR----AIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDA 311
           ++T TI I  + K CG A     A+     MA +  C   + ++NS++N   ++G +   
Sbjct: 121 VLTETIFI-LIFKACGKAHLPGEAVNFFHRMANDLHCKQTVKSFNSVLNVIIQEGDF--- 176

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
                          S  +   LH  G+              N     P + TYN++I  
Sbjct: 177 ---------------SYAFKFYLHVFGA--------------NSKGFQPNLLTYNLIIKA 207

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           LCK G +DRA+++F +M  KNC PD+ TY+T++  LCKE  ++EA+ LL  +    C P 
Sbjct: 208 LCKLGQIDRAVDTFREMPLKNCNPDVFTYSTLMNGLCKERRVDEAVFLLDEMQAEGCLPN 267

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
            +T+N LID L+K G + +A  L   M   G  P+++T+ TLI G C   ++++A+ LL+
Sbjct: 268 PVTFNVLIDALSKNGDLSRAAKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLE 327

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           ++           Y  +I+GL K ++ +  + +L  M     K ++ ++S+++  +  +G
Sbjct: 328 KMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHILMSMEERGQKANEYIYSSLISGLFKEG 387

Query: 552 MTEEAYKLWQKLIE 565
            +E A +LW+++ E
Sbjct: 388 KSENAVRLWKEMAE 401



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 98/375 (26%), Positives = 176/375 (46%), Gaps = 16/375 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++   C +GKL  A  L++ M     +P+      +I GL++  R E    +L
Sbjct: 302 NEVTYNTLIHGLCLKGKLDKALSLLEKMVSSKCVPNQVTYGTIINGLVKQRRAEDGVHIL 361

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G   +   Y+ ++ GL K G+  +A+ L  EM+  GC+P+V+ Y   +  +  +
Sbjct: 362 MSMEERGQKANEYIYSSLISGLFKEGKSENAVRLWKEMAEKGCKPNVVVYGAFIDGLCRD 421

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  +A    ++ L KG  P   TY+ L++   K+    +AI V  +M  +    ++V  
Sbjct: 422 EKPDEAEDILQEMLSKGFLPNAFTYSSLMKGFFKKGDSQKAILVWKEMMSQDMRHNVVCC 481

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM-- 353
           + L+N  C+ G+  +A+ V  ++L  G++P+ + Y++++  L   G  D   K+   M  
Sbjct: 482 SVLLNGLCESGRLREALTVWTHMLGEGLKPDVVAYSSMIKGLCDVGSVDKGLKLFYEMQC 541

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E    P V TYNIL N LC+   + RAI+  N M+ + C PD +T N  L  L +    
Sbjct: 542 QEPKSRPDVVTYNILFNALCRQDNLTRAIDLLNSMLDEGCDPDSLTCNIFLETLRERINP 601

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +  +L                + L+  L K+     A+ +  +M+   + P+  T   +
Sbjct: 602 PQDGRLF--------------LDELVVRLLKRERKLSALRIVEEMLLRFLPPEPSTWSRV 647

Query: 474 IWGFCRADQVEEAVD 488
           I   C+  ++ E +D
Sbjct: 648 IQRTCKPKRIRETID 662


>gi|225427506|ref|XP_002263778.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g31840-like [Vitis vinifera]
          Length = 1131

 Score =  196 bits (499), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 229/457 (50%), Gaps = 14/457 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  +C   +L +A  L ++M  +  +PD      LI GL R  ++E+ + +  + 
Sbjct: 277 TFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMA 336

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   D + ++ ++    + G +  AI +   M   G  P+V+TY+ ++  +  NG+ 
Sbjct: 337 LARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRV 396

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A G +   L++G  P ++TY+ LI+  CK   +     +   M  +G  PD+V  + L
Sbjct: 397 LEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSML 456

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW------DAVDKILDI 352
           +N   +QG  D+A+      + RG+  N+  +N L+      GC+      D + K+  +
Sbjct: 457 INGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALID-----GCFRLKRTRDGL-KMYIL 510

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P V TY +L+ GL + G +D A+  F Q++ K   PD + Y T++   CK+  
Sbjct: 511 MGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRD 570

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
               LQ+  L+  +   P +  YN LI+   ++GC+E  + L  ++++ G+ PD +T+ T
Sbjct: 571 PATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNT 630

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +I G+C      +A+ L  E+ K G    N+  + ++I   CK  ++D A+ +   M+  
Sbjct: 631 MICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLER 689

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +P+   +S ++        TE A++L++K++  +V
Sbjct: 690 GPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRV 726



 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 189/371 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC    L D   L  IM R+  +PD   C  LI GL R   +++A +     
Sbjct: 417 TYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQA 476

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G   +   +N ++ G  +  + R  + +   M +    PDV+TY  +++ + + G+ 
Sbjct: 477 VKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRL 536

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  +   L+KG  P  I Y  LI+  CK+   A  +++   M   G  PDI  YN L
Sbjct: 537 DEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVL 596

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   ++G  ++ + ++  ++  G+EP+ +TYNT++    S   +    K+ +++     
Sbjct: 597 INMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRT 656

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   T+ ILI+  CK G +D A+  F+ M+ +  +P+I+TY+ ++    K      A +
Sbjct: 657 QPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFE 716

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   + G   SP +++Y+ LIDGL KKG ME+A + +   +   + PD I +  LI G+C
Sbjct: 717 LYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYC 776

Query: 479 RADQVEEAVDL 489
           +  ++ EA+ L
Sbjct: 777 KVGRLAEAMML 787



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 115/454 (25%), Positives = 212/454 (46%), Gaps = 4/454 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D    + I+  +   G L  A ++   M +    P+      LI GL R  R+ +A 
Sbjct: 341 VKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEAC 400

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V   ++  G  P  +TY+ ++ G CK   +R    L   M   G  PDV+  + ++  +
Sbjct: 401 GVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGL 460

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A+ F+   +++G       +  LI+   +       +++   M +    PD+
Sbjct: 461 SRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDV 520

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  LV    +QG+ D+A+ +   LL +G  P+ I Y TL+     +       +I  +
Sbjct: 521 VTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKL 580

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P +  YN+LIN   + G V+  +    +++    +PDIVTYNT++   C   +
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKI 640

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            ++A++L  +L      P  IT+  LID   K G M+ AM+++  M+E G  P+ +T+  
Sbjct: 641 FSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSC 700

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMIS 530
           LI G+ + +  E A +L +++   G+++  +  +Y ++I GLCK   ++ A    +  I 
Sbjct: 701 LIDGYFKTENTESAFELYEKM--LGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIG 758

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
               PD   +  +++     G   EA  L+  ++
Sbjct: 759 RHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHML 792



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 120/504 (23%), Positives = 223/504 (44%), Gaps = 74/504 (14%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           GKL + + L  +   R    D     +++   +R+  + KA +V   M+  G  P+ +TY
Sbjct: 324 GKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTY 383

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           ++++ GLC+ G++  A  +  ++   G EP V+TY++++     +   +   G +   LR
Sbjct: 384 SILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLR 443

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEV--------------LDDMAIEGCS------- 289
           KG  P ++  ++LI  + +Q  +  A+                L +  I+GC        
Sbjct: 444 KGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRD 503

Query: 290 --------------PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
                         PD+VTY  LV    +QG+ D+A+ +   LL +G  P+ I Y TL+ 
Sbjct: 504 GLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLID 563

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               +       +I  +M      P +  YN+LIN   + G V+  +    +++    +P
Sbjct: 564 GFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEP 623

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           DIVTYNT++   C   + ++A++L  +L      P  IT+  LID   K G M+ AM+++
Sbjct: 624 DIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIF 683

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE-------------------IGKR 496
             M+E G  P+ +T+  LI G+ + +  E A +L ++                   + K+
Sbjct: 684 SSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKK 743

Query: 497 GNKMRNS----------------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           G     S                AY ++I G CK  ++  A+ + + M+ +   PDD   
Sbjct: 744 GLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD--- 800

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
             + K +A+ G  +    ++  + 
Sbjct: 801 -LLQKALAEYGFQDSQASIYSTVF 823



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/487 (22%), Positives = 222/487 (45%), Gaps = 40/487 (8%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           N     + +L  +C  G +  A      M++       +    ++  LI  DRI+   + 
Sbjct: 138 NPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILEN 197

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            + M    GV     Y  +     KRG++   +     +   G  P ++  N IL+ +  
Sbjct: 198 YEEMCKGLGV-----YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCM 252

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             +   A  F+   +R G  P L+T++ LI   CK+  +  A  + + M  +G  PD+V 
Sbjct: 253 GNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVI 312

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ L+N   + GK ++   + +  L+RG++ + + +++++ +    G      ++   M 
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRML 372

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +   SP V TY+ILINGLC+ G V  A   F Q++ +  +P ++TY++++   CK   L 
Sbjct: 373 KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLR 432

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS---------- 464
           +   L  ++      P ++  + LI+GL+++G M++A+  + Q ++ G++          
Sbjct: 433 DGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALI 492

Query: 465 -------------------------PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
                                    PD +T+  L+ G     +++EA+ L  ++ K+G  
Sbjct: 493 DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS 552

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             +  Y  +I G CK +     +Q+ +LM S+   PD  +++ ++     +G  E   +L
Sbjct: 553 PDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLEL 612

Query: 560 WQKLIEW 566
            +++I++
Sbjct: 613 LREIIKY 619



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/419 (21%), Positives = 192/419 (45%), Gaps = 41/419 (9%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P T+ Y+ ++   C+ G +  A+     MS  G        + +L  + D+ +    
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +  + +++ KG    L  Y  +     K+  + + +     +   G  P IV  N ++  
Sbjct: 195 LENY-EEMCKG----LGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C   +   A    + ++  G  PN +T++TL++        D    + ++M E    P 
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           +  Y+ILINGL + G ++   + F+  +++  + D+V +++++ A  + G L +A+++  
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYT 369

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +     SP ++TY+ LI+GL + G + +A  ++GQ+++ G+ P  +T+ +LI GFC+++
Sbjct: 370 RMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429

Query: 482 QV-----------------------------------EEAVDLLKEIGKRGNKMRNSAYR 506
            +                                   +EA+    +  KRG  + N  + 
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFN 489

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +I G  + K+    +++  LM   +  PD   ++ +VK +A+ G  +EA  L+ +L++
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLK 548



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 151/363 (41%), Gaps = 71/363 (19%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +++    +G+L +A  L   + ++   PD      LI G  +        ++ 
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF 578

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M  +G  PD   YN+++    + G + + + LL E+   G EPD++TYNT++      
Sbjct: 579 KLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSL 638

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
             F +AI  ++        P  IT+TILI+  CK   +  A+ +   M   G  P+I+TY
Sbjct: 639 KIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTY 698

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L++   K    + A  +   +L   + PN ++Y                         
Sbjct: 699 SCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSY------------------------- 733

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                     +ILI+GLCK GL++ A  +F   + ++  PD++ Y  ++   CK G L E
Sbjct: 734 ----------SILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAE 783

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI- 474
                                              AM+LY  M+ NGI PDD+  + L  
Sbjct: 784 -----------------------------------AMMLYDHMLVNGIMPDDLLQKALAE 808

Query: 475 WGF 477
           +GF
Sbjct: 809 YGF 811



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 48/196 (24%), Positives = 92/196 (46%), Gaps = 2/196 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMA-RRNQIPDFHFCINLIRGLIRIDRIEKA 171
           +E D  T N ++  +CS    + A KL +++   R Q     F I LI    +  R++ A
Sbjct: 621 LEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI-LIDAYCKDGRMDDA 679

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M+  G  P+ +TY+ ++ G  K     SA  L ++M      P++++Y+ ++  
Sbjct: 680 MLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDG 739

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   G  ++A   ++  + +   P +I Y ILI   CK   +A A+ + D M + G  PD
Sbjct: 740 LCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799

Query: 292 IVTYNSLVNFSCKQGK 307
            +   +L  +  +  +
Sbjct: 800 DLLQKALAEYGFQDSQ 815


>gi|242079087|ref|XP_002444312.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
 gi|241940662|gb|EES13807.1| hypothetical protein SORBIDRAFT_07g020010 [Sorghum bicolor]
          Length = 695

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/453 (25%), Positives = 220/453 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N ++      GK +DA K+ D M  R   P+      +I G ++   +E   ++ 
Sbjct: 194 DAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTMIDGHVKGGDLEAGFRLR 253

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  P+ +TYN+++ GLC+ G++    AL+DEM+     PD  TY+ +   +   
Sbjct: 254 DQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRT 313

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  +  +  + + L+KG      T +IL+  +CK   +A+A +VL+ +   G  P    Y
Sbjct: 314 GDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIY 373

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L+N  C+      A  +   + SR + P+ ITYN L++ L         + ++  M +
Sbjct: 374 NTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEK 433

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P+V T+N LI+   + G +++     + M  K  + +++++ +V+ A CK G + E
Sbjct: 434 SGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPE 493

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ +L  +      P    YN++ID   + G  E+A +L  +M  +G+S    T+  L+ 
Sbjct: 494 AVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLK 553

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  Q++EA +L+  +  +G +    +Y  +I   C     D A+++L+ M     +P
Sbjct: 554 GLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRP 613

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
               +  ++  +   G   +   L+Q ++   V
Sbjct: 614 TLRTYHPLLSALGSAGRVHDMECLYQHMVHKNV 646



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 123/495 (24%), Positives = 224/495 (45%), Gaps = 72/495 (14%)

Query: 146 RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRS 205
           R+ +P    C  L+  L+ + R         ++V +G  PDT  +N  V      G +  
Sbjct: 117 RSPLPSLSSCNLLLESLLSVGRHADVRAAFGLLVAAGARPDTFAWNKAVQACVAAGDLDE 176

Query: 206 AIALLDEM--SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
           A+A+L  M  S     PD  +YN ++  ++ +GK   A+  + + + +G  P  ITY  +
Sbjct: 177 ALAMLRRMGRSEGAPPPDAFSYNVVIAGLWRSGKGSDALKVFDEMVDRGVAPNQITYNTM 236

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+   K   +     + D M  +G  P++VTYN L++  C+ G+ D+   +++ + S  M
Sbjct: 237 IDGHVKGGDLEAGFRLRDQMLQDGRKPNVVTYNVLLSGLCRAGRMDETRALMDEMTSYSM 296

Query: 324 EPNSITYNTLLHSLGSRG-------------------------------CWDA----VDK 348
            P+  TY+ L   L   G                               C D      ++
Sbjct: 297 LPDGFTYSILFDGLTRTGDSRTMLSLFGESLKKGVIIGAYTCSILLNGLCKDGKVAKAEQ 356

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L+++      PT   YN LING C+   +  A + F QM S++ +PD +TYN ++  LC
Sbjct: 357 VLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRHIRPDHITYNALINGLC 416

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K  M+ EA  L+  +  S   P + T+NTLID   + G +EK   +   M + GI  + I
Sbjct: 417 KMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCFTVLSDMQDKGIKSNVI 476

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRG----------------------------NKM 500
           +  +++  FC+  ++ EAV +L ++  +                              KM
Sbjct: 477 SFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAYIESGGTEQAFLLVEKM 536

Query: 501 RNSA-------YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
           ++S        Y L++ GLCK+ ++D A +++  + +   +PD   ++TI+    + G T
Sbjct: 537 KSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDVVSYNTIISACCNKGDT 596

Query: 554 EEAYKLWQKLIEWKV 568
           + A +L Q++ ++ +
Sbjct: 597 DRALELLQEMHKYDI 611



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 103/414 (24%), Positives = 197/414 (47%), Gaps = 41/414 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD--------------------------- 151
           T N +L   C  G++ +   L+D M   + +PD                           
Sbjct: 267 TYNVLLSGLCRAGRMDETRALMDEMTSYSMLPDGFTYSILFDGLTRTGDSRTMLSLFGES 326

Query: 152 --------FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
                    + C  L+ GL +  ++ KA +VL+++V +G VP T  YN ++ G C+   +
Sbjct: 327 LKKGVIIGAYTCSILLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDL 386

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
           + A ++ ++M      PD ITYN ++  +       +A     +  + G  P + T+  L
Sbjct: 387 QGAFSIFEQMKSRHIRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTL 446

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+   +   + +   VL DM  +G   +++++ S+V   CK GK  +AV ++++++ + +
Sbjct: 447 IDAYGRAGQLEKCFTVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDV 506

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN+  YN+++ +    G  +    +++ M  +  S ++FTYN+L+ GLCK   +D A  
Sbjct: 507 VPNAQVYNSIIDAYIESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEE 566

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
               + ++  +PD+V+YNT++ A C +G  + AL+LL  ++     P L TY+ L+  L 
Sbjct: 567 LIYNLTNQGLRPDVVSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALG 626

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
             G +     LY  M+   + P      + I+G  R +   +   L KE+ ++G
Sbjct: 627 SAGRVHDMECLYQHMVHKNVEPS-----SSIYG-TRCENESKVASLKKEMSEKG 674



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 95/350 (27%), Positives = 166/350 (47%), Gaps = 7/350 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L   C  GK+  A ++++++     +P       LI G  ++  ++ A  + + M    
Sbjct: 341 LLNGLCKDGKVAKAEQVLEMLVHTGLVPTTAIYNTLINGYCQVRDLQGAFSIFEQMKSRH 400

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD ITYN ++ GLCK   I  A  L+ EM  SG +P V T+NT++      G+ ++  
Sbjct: 401 IRPDHITYNALINGLCKMEMITEAEDLVMEMEKSGVDPSVETFNTLIDAYGRAGQLEKCF 460

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               D   KG    +I++  +++  CK   I  A+ +LDDM  +   P+   YNS+++  
Sbjct: 461 TVLSDMQDKGIKSNVISFGSVVKAFCKNGKIPEAVAILDDMIHKDVVPNAQVYNSIIDAY 520

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            + G  + A L++  + S G+  +  TYN LL  L      D  ++++  +      P V
Sbjct: 521 IESGGTEQAFLLVEKMKSSGVSASIFTYNLLLKGLCKNSQIDEAEELIYNLTNQGLRPDV 580

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            +YN +I+  C  G  DRA+    +M   + +P + TY+ +L AL   G +++   L   
Sbjct: 581 VSYNTIISACCNKGDTDRALELLQEMHKYDIRPTLRTYHPLLSALGSAGRVHDMECLYQH 640

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +   +  P    Y T  +  +K   ++K      +M E GI+ DD T RT
Sbjct: 641 MVHKNVEPSSSIYGTRCENESKVASLKK------EMSEKGIAFDD-TERT 683


>gi|224157081|ref|XP_002337799.1| predicted protein [Populus trichocarpa]
 gi|222869732|gb|EEF06863.1| predicted protein [Populus trichocarpa]
          Length = 367

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 108/357 (30%), Positives = 181/357 (50%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +TYN ++G  C+ G +  A  +++ M+  G +P + TYN I+  +   G++ +A G   +
Sbjct: 2   VTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIE 61

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            L  G  P   TY  L+ + C++   + A E+  +M  +G  PD+V+++SL+    +   
Sbjct: 62  MLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRH 121

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D A++   ++   G+ P+++ Y  L+H     G      KI D M E      V  YN 
Sbjct: 122 LDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNT 181

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           ++NGLCK  ++  A   F++MV +   PD  T+ T++   C++G + +AL L   +   +
Sbjct: 182 ILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRN 241

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P ++ YNTLIDG  K G MEKA  L+  M+   I P+ IT+  LI  +C    V EA 
Sbjct: 242 IKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAF 301

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            L   + ++G K        VI G C+S     A + L  MI+    PD   ++T++
Sbjct: 302 RLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 103/356 (28%), Positives = 187/356 (52%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G L +A ++++ MA +   P       +I GL +  R  +A  +L  M
Sbjct: 3   TYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEM 62

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PDT TYN ++   C+R     A  +  EM   G  PD++++++++     N   
Sbjct: 63  LNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHL 122

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA+ +++D  + G  P  + YT+L+   C+   +  A+++ D+M  +GC  D++ YN++
Sbjct: 123 DQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTI 182

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK+    DA  + + ++ RG  P+  T+ TL+H     G       +   M + + 
Sbjct: 183 LNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNI 242

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +  YN LI+G CK G +++A   ++ M+S+   P+ +TY  ++ A C  G ++EA +
Sbjct: 243 KPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFR 302

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           L  ++      P L+T NT+I G  + G   KA    G+M+  G++PD I++ TLI
Sbjct: 303 LWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/353 (30%), Positives = 179/353 (50%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI    R   +E+A +++  M   G  P   TYN ++ GLCK+G+   A  +L EM   G
Sbjct: 7   LIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILIEMLNIG 66

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PD  TYNT+L        F +A   + + LR+G  P L++++ L+    +   + +A+
Sbjct: 67  LSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQAL 126

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
               DM   G  PD V Y  L++  C+ G   +A+ + + +L +G   + I YNT+L+ L
Sbjct: 127 VYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGL 186

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                    DK+ D M E    P  +T+  LI+G C+ G + +A++ F  M  +N +PDI
Sbjct: 187 CKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDI 246

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V YNT++   CK G + +A +L   +      P  ITY  LI+     G + +A  L+  
Sbjct: 247 VAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDV 306

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           M+E GI P  +T  T+I G+CR+    +A + L  +  +G    + +Y  +I+
Sbjct: 307 MIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLIN 359



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 99/343 (28%), Positives = 173/343 (50%)

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           ++TYNT++      G  ++A         KG  P L TY  +I  +CK+   ARA  +L 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +M   G SPD  TYN+L+  SC++  + +A  +   +L +G+ P+ +++++L+       
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             D        M +    P    Y +L++G C+ G +  A+   ++M+ + C  D++ YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           T+L  LCKE ML +A +L   +      P   T+ TLI G  + G M KA+ L+G M + 
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
            I PD + + TLI GFC+  ++E+A +L   +  R     +  Y ++I+  C    V  A
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++ ++MI    KP     +T++K     G + +A +   ++I
Sbjct: 301 FRLWDVMIEKGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMI 343



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 90/309 (29%), Positives = 160/309 (51%)

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           ++TY  LI   C++  +  A E+++ MA +G  P + TYN+++N  CK+G+Y  A  ++ 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +L+ G+ P++ TYNTLL     R  +    +I   M      P + +++ L+    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +D+A+  F  M      PD V Y  ++   C+ G + EAL++   +    C   +I YN
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           T+++GL K+  +  A  L+ +M+E G  PD  T  TLI G C+   + +A+ L   + +R
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
             K    AY  +I G CK  +++ A ++ + MIS +  P+   +  ++      G   EA
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEA 300

Query: 557 YKLWQKLIE 565
           ++LW  +IE
Sbjct: 301 FRLWDVMIE 309



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/289 (30%), Positives = 146/289 (50%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L   C R   ++A ++   M R+  +PD     +L+    R   +++A    
Sbjct: 70  DTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNRHLDQALVYF 129

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G VPD + Y +++ G C+ G +  A+ + DEM   GC  DVI YNTIL  +   
Sbjct: 130 RDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYNTILNGLCKE 189

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A   + + + +G  P   T+T LI   C+   + +A+ +   M      PDIV Y
Sbjct: 190 KMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQRNIKPDIVAY 249

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  CK G+ + A  + + ++SR + PN ITY  L+++  S G      ++ D+M E
Sbjct: 250 NTLIDGFCKVGEMEKASELWDGMISRKIFPNHITYGILINAYCSVGHVSEAFRLWDVMIE 309

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               PT+ T N +I G C+ G   +A     +M++K   PD ++YNT++
Sbjct: 310 KGIKPTLVTCNTVIKGYCRSGDSSKADEFLGRMIAKGVAPDHISYNTLI 358



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 74/283 (26%), Positives = 140/283 (49%)

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VTYN+L+   C++G  ++A  ++N++  +G++P+  TYN +++ L  +G +     IL 
Sbjct: 1   MVTYNTLIGAYCREGLLEEAFEIMNSMADKGLKPSLFTYNAIINGLCKKGRYARAKGILI 60

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M     SP   TYN L+   C+      A   F +M+ +   PD+V++++++    +  
Sbjct: 61  EMLNIGLSPDTTTYNTLLVESCRRDNFSEAKEIFGEMLRQGVVPDLVSFSSLMAVFSRNR 120

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L++AL     +      P  + Y  L+ G  + G M +A+ +  +M+E G   D I + 
Sbjct: 121 HLDQALVYFRDMKKFGLVPDNVIYTVLMHGYCRNGNMLEALKIRDEMLEQGCVLDVIAYN 180

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           T++ G C+   + +A  L  E+ +RG       +  +IHG C+   +  A+ +   M   
Sbjct: 181 TILNGLCKEKMLTDADKLFDEMVERGALPDFYTFTTLIHGHCQDGNMTKALSLFGTMTQR 240

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             KPD   ++T++      G  E+A +LW  +I  K+F    T
Sbjct: 241 NIKPDIVAYNTLIDGFCKVGEMEKASELWDGMISRKIFPNHIT 283


>gi|296089633|emb|CBI39452.3| unnamed protein product [Vitis vinifera]
          Length = 718

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 210/426 (49%), Gaps = 12/426 (2%)

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
           F  +LIR        +++ KV + M   G  P  +T+N ++  + KRG+   A  L DEM
Sbjct: 167 FFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEM 226

Query: 214 -SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
               G  PD  T+N ++R    N    +   F+K+  R  C P ++TY  L++ +C+   
Sbjct: 227 LDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGK 286

Query: 273 IARAIEVLDDMAIEG--CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           +  A  V+  M  +    SP++VTY +L+   C +    +A+ ++  ++SRG++PN ITY
Sbjct: 287 VKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITY 346

Query: 331 NTLLHSLGSRGCWDAVDKILD-IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           NTL+  L      D + +IL+ ++ +    P   T N LI   C  G ++ A + F +M 
Sbjct: 347 NTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMS 406

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-------LLNGSSCSPCLITYNTLIDGL 442
               QPD  TY+ ++ +LC+ G    A +          LL+   C P +  YN + + L
Sbjct: 407 ELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYL 466

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
              G  +KA  ++ Q+M+ G + D  +++TLI G CR    E   DLL  + +R      
Sbjct: 467 CSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDA 525

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y L+I GL K     +A + LE M+ S + P   +F +I+  + + G   E+  L + 
Sbjct: 526 ETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKL 585

Query: 563 LIEWKV 568
           ++E ++
Sbjct: 586 MLERRI 591



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 211/462 (45%), Gaps = 16/462 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N +L     RG+ + A +L D M     + PD +    LIRG      +++     + 
Sbjct: 202 TFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKE 261

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM--SVSGCEPDVITYNTILRTMFDN 235
           M      PD +TYN +V GLC+ G+++ A  ++  M        P+V+TY T++R     
Sbjct: 262 MSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMK 321

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVT 294
               +A+    + + +G  P  ITY  LI+ +C+   + +  E+L+ M  +G   PD  T
Sbjct: 322 QDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCT 381

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD--- 351
            N+L+   C  GK ++A  V   +    ++P+S TY+ L+ SL  RG +   ++  D   
Sbjct: 382 LNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELA 441

Query: 352 ----IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
               ++++    P V  YN +   LC  G   +A   F Q++ +  Q D  +Y T++   
Sbjct: 442 EKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGH 500

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C+EG       LL L+      P   TY  +IDGL KKG    A     +M+++   P  
Sbjct: 501 CREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTT 560

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK----MRNSAYRLVIHGLCKSKKVDMAIQ 523
               +++          E+  L+K + +R  +    +       ++  LC+S+K+  A +
Sbjct: 561 AIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSFLCQSRKLLEAQK 620

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +L   +  R   D  + ST++  +       EA+ L+ +L+E
Sbjct: 621 MLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVE 662



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 87/357 (24%), Positives = 170/357 (47%), Gaps = 13/357 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++ +C +  + +A  L+  M  R   P+      LI+GL    +++K  ++L+ M
Sbjct: 310 TYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGM 369

Query: 179 VMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           V  GG +PDT T N ++   C  G++  A ++ ++MS    +PD  TY+ ++R++   G 
Sbjct: 370 VGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGD 429

Query: 238 FKQAIGFWKDQLRK-------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
           F++A  F+ +   K       GC P +  Y  + E +C      +A  V   +   G + 
Sbjct: 430 FRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQ 488

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D  +Y +L+   C++G  +    ++  +L R   P++ TY  ++  L  +G      K L
Sbjct: 489 DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSL 548

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI----VTYNTVLGA 406
           + M ++SH PT   ++ ++  L + G    + +    M+ +  + +I     T   ++  
Sbjct: 549 EKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTMEELVSF 608

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           LC+   L EA ++L        S  +   +T+I GL K   + +A  LY +++E G+
Sbjct: 609 LCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGM 665


>gi|255581238|ref|XP_002531431.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223528950|gb|EEF30943.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 737

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 112/403 (27%), Positives = 202/403 (50%), Gaps = 1/403 (0%)

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           R  ++  A +VL +M  +G  P+ +  N  +  L    ++  A+  L+ M + G  P+V+
Sbjct: 183 RAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVV 242

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           TYN +++   D  + + A+    +   KGCPP  ++Y  ++  +C+   I     +++ M
Sbjct: 243 TYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKM 302

Query: 284 AIEG-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
             +    PD VTYN+LV+   K G  D+A+  +     RG + + + Y+ +++S   +G 
Sbjct: 303 VKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNSFCMQGR 362

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            D   +I++ M     SP V TY  ++NGLCK G V+ A     QM    C+P+ V+Y  
Sbjct: 363 MDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPNTVSYTA 422

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           +L  LC+ G   EA ++++       +P  ITY+ ++ GL ++G + +A  +  +M+  G
Sbjct: 423 LLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVREMLTKG 482

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             P  +    LI   C   ++ EA   ++E   RG  +    +  VIHG C+S  +D A+
Sbjct: 483 FFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSDNIDTAL 542

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +L+ M  +   PD   F+ I+  +   G  EEA     K+++
Sbjct: 543 SLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLK 585



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/514 (24%), Positives = 234/514 (45%), Gaps = 73/514 (14%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ ++   GKL +A +++ +M +    P+   C   I  L+  +++EKA + L+ M + G
Sbjct: 177 VMVSYSRAGKLRNAMQVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVG 236

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP---------------------- 220
             P+ +TYN ++ G C   Q+  A+ L+ EM   GC P                      
Sbjct: 237 ITPNVVTYNCLIKGYCDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVR 296

Query: 221 --------------DVITYNTILRTMFDNGKFKQAIGFWKD------------------- 247
                         D +TYNT++  +  +G   +A+ F ++                   
Sbjct: 297 NLMEKMVKDNKLFPDQVTYNTLVHMLSKHGHADEALEFLRETEERGFQVDKVGYSAIVNS 356

Query: 248 ----------------QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
                            + KGC P ++TYT ++  +CK   +  A ++L  M   GC P+
Sbjct: 357 FCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKMLQQMYKHGCKPN 416

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            V+Y +L+N  C+ G   +A  ++N        PN+ITY+ ++H L   G       ++ 
Sbjct: 417 TVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRREGKLSEACDVVR 476

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M      PT    N+LI  LC    ++ A     + +++ C  + V + TV+   C+  
Sbjct: 477 EMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNFTTVIHGFCQSD 536

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            ++ AL LL  +  ++  P  +T+  +ID L KKG +E+A V   +M++ G+ P  +T+R
Sbjct: 537 NIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLKKGLDPTPVTYR 596

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            +I  +C+  +VEE + LL ++  R +K R +AY  VI  LC     + A +V+ L++ +
Sbjct: 597 AVIHQYCKMGRVEELIKLLGKMLSR-SKCR-TAYNQVIEKLCNFGNPEAADKVVGLVLRT 654

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             + D      +++     G+   AYK+  ++ +
Sbjct: 655 ASRIDANTCHMLMESYLSKGIPLSAYKVACRMFD 688



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 92/393 (23%), Positives = 193/393 (49%), Gaps = 4/393 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+   + I+ +FC +G++  A ++++ M  +   PD      ++ GL ++ ++E+A K+L
Sbjct: 346 DKVGYSAIVNSFCMQGRMDRAKEIVNEMITKGCSPDVVTYTAVVNGLCKVGKVEEAKKML 405

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M   G  P+T++Y  ++ GLC+ G    A  +++        P+ ITY+ ++  +   
Sbjct: 406 QQMYKHGCKPNTVSYTALLNGLCQHGNSLEAREMMNTSEEDWWTPNAITYSVVMHGLRRE 465

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A    ++ L KG  P  +   +LI+ +C +  +  A + +++    GC+ + V +
Sbjct: 466 GKLSEACDVVREMLTKGFFPTPVEINLLIKSLCLEQKMNEAKKFMEECLNRGCAVNAVNF 525

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            ++++  C+    D A+ +++++      P+++T+  ++ +LG +G  +        M +
Sbjct: 526 TTVIHGFCQSDNIDTALSLLDDMYLNNKHPDAVTFTAIIDALGKKGRIEEATVYTMKMLK 585

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLN 414
               PT  TY  +I+  CK G V+  I    +M+S++ C+     YN V+  LC  G   
Sbjct: 586 KGLDPTPVTYRAVIHQYCKMGRVEELIKLLGKMLSRSKCR---TAYNQVIEKLCNFGNPE 642

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A +++ L+  ++      T + L++    KG    A  +  +M +  + PD      L 
Sbjct: 643 AADKVVGLVLRTASRIDANTCHMLMESYLSKGIPLSAYKVACRMFDRNLIPDLKLCEKLS 702

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
                  ++EEA +L+ +  +RGN   +S+  L
Sbjct: 703 KKLVLEGKLEEADNLMLQFVQRGNISPDSSQHL 735



 Score = 79.0 bits (193), Expect = 6e-12,   Method: Compositional matrix adjust.
 Identities = 56/209 (26%), Positives = 102/209 (48%), Gaps = 3/209 (1%)

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
           H P V  Y +++  L K  L   A      MV +        +  V+ +  + G L  A+
Sbjct: 134 HDPIV--YYMMLQVLSKTKLCQGARRVLRLMVRRGIARRPEAFAHVMVSYSRAGKLRNAM 191

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           Q+L ++  +   P L+  NT I  L     +EKA+    +M   GI+P+ +T+  LI G+
Sbjct: 192 QVLTMMQKAGVEPNLLICNTAIHVLVMANKLEKALRFLERMQLVGITPNVVTYNCLIKGY 251

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS-SRYKPD 536
           C   QVE A++L+ E+  +G      +Y  V+  LC+ K++     ++E M+  ++  PD
Sbjct: 252 CDLYQVEHAMELIAEMPFKGCPPDKVSYYTVMGFLCQDKRIKEVRNLMEKMVKDNKLFPD 311

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              ++T+V  ++  G  +EA +  ++  E
Sbjct: 312 QVTYNTLVHMLSKHGHADEALEFLRETEE 340


>gi|115469638|ref|NP_001058418.1| Os06g0690900 [Oryza sativa Japonica Group]
 gi|52076717|dbj|BAD45630.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|53793285|dbj|BAD54507.1| putative fertility restorer [Oryza sativa Japonica Group]
 gi|113596458|dbj|BAF20332.1| Os06g0690900 [Oryza sativa Japonica Group]
          Length = 991

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 222/455 (48%), Gaps = 12/455 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKA 171
           +E +  T N ++  +C  G+L  A  L  +M     Q  ++ + I LI+GL     + KA
Sbjct: 214 LEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTI-LIQGLCDAKCVRKA 272

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +  +M   G  P+   +  ++ GLCK G++  A  L D M  +G  P V+TYN ++  
Sbjct: 273 LVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVG 332

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G+   A+   +   + GC P   TY  LI  +C Q     A E+L++   EG +P 
Sbjct: 333 YSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPT 391

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VT+ +L+N  C   K+DDA+ + N ++S   + +   +  L++SL  +   D + +  +
Sbjct: 392 VVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK---DRLKEAKE 448

Query: 352 IMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           ++NE S +   P V TY  +I+G CK G VD A+     M    CQP+  TYN+++  L 
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K+  L++A+ LL  +      P +ITY TL+ G   +   + A  L+  M +NG+ PD+ 
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            +  L    C+A + EEA      I ++G  +    Y  +I G  K+   D A  ++E M
Sbjct: 569 AYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           I     PD   +S ++  +       EA  +  ++
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660



 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 224/485 (46%), Gaps = 39/485 (8%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + +E +   ++Q  C    +  A  L  +M R    P+      LI GL +  R+  A  
Sbjct: 250 QRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARL 309

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M  +G VP  +TYN M+ G  K G++  A+ + + M  +GC PD  TYNT++  + 
Sbjct: 310 LFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC 369

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC------------------------- 268
           D  K ++A     + +++G  P ++T+T LI   C                         
Sbjct: 370 DQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 428

Query: 269 ----------KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
                     K+  +  A E+L++++  G  P+++TY S+++  CK GK D A+ V+  +
Sbjct: 429 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 488

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G +PN+ TYN+L++ L           +L  M +    P V TY  L+ G C     
Sbjct: 489 ERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDF 548

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A   F  M     +PD   Y  +  ALCK G   EA   + +  G + +   + Y TL
Sbjct: 549 DNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI-VRKGVALTK--VYYTTL 605

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           IDG +K G  + A  L  +M++ G +PD  T+  L+   C+  ++ EA+ +L ++  RG 
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           K    AY ++I  + +  K D A ++   M SS +KP  T ++  +     +G  E+A  
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725

Query: 559 LWQKL 563
           L  K+
Sbjct: 726 LILKM 730



 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 212/411 (51%), Gaps = 1/411 (0%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +PD      +I+   +   +  A +  ++++  G  P+T T N +V G C+ G++R A  
Sbjct: 180 LPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACW 239

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           L   M + GC+ +  +Y  +++ + D    ++A+  +    R GC P +  +T LI  +C
Sbjct: 240 LFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLC 299

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   +  A  + D M   G  P ++TYN+++    K G+ +DA+ +   +   G  P+  
Sbjct: 300 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDW 359

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TYNTL++ L  +   +A +++L+   +   +PTV T+  LING C     D A+   N+M
Sbjct: 360 TYNTLIYGLCDQKTEEA-EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 418

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           +S  C+ D+  +  ++ +L K+  L EA +LL+ ++ +   P +ITY ++IDG  K G +
Sbjct: 419 MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKV 478

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           + A+ +   M  +G  P+  T+ +L++G  +  ++ +A+ LL ++ K G       Y  +
Sbjct: 479 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTL 538

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           + G C     D A ++ E+M  +  KPD+  ++ +   +   G  EEAY  
Sbjct: 539 LQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589



 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/479 (26%), Positives = 226/479 (47%), Gaps = 28/479 (5%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I+  +C  GK+  A +++ +M R    P+     +L+ GL++  ++ KA  +L  M
Sbjct: 464 TYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKM 523

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +P+ ITY  ++ G C      +A  L + M  +G +PD   Y  +   +   G+ 
Sbjct: 524 QKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRA 583

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A  F    +RKG     + YT LI+   K      A  +++ M  EGC+PD  TY+ L
Sbjct: 584 EEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVL 640

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CKQ + ++A+ +++ +  RG++     Y  L+  +   G  D   ++ + M  + H
Sbjct: 641 LHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGH 700

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P+  TY + IN  CK G ++ A +   +M  +   PD+VTYN ++      G ++ A  
Sbjct: 701 KPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFS 760

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGC----------------MEKAMVLYGQMMENG 462
            L  + G+SC P   TY  L+  L K                   ++    L  +M+++G
Sbjct: 761 TLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHG 820

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           ++P   T+ +LI GFC+A ++EEA  LL  +  +G       Y L+I   C +K  + A+
Sbjct: 821 LNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKAL 880

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE---------WKVFEKG 572
             + +M    ++P    +  +V  + ++G  E+   L+  L+E         WK+   G
Sbjct: 881 SFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAWKILNDG 939



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 206/446 (46%), Gaps = 4/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +   G++ DA K+ ++M +    PD      LI GL    + E+A ++L   
Sbjct: 325 TYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNA 383

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P  +T+  ++ G C   +   A+ + ++M  S C+ D+  +  ++ ++    + 
Sbjct: 384 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 443

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A     +    G  P +ITYT +I+  CK   +  A+EVL  M  +GC P+  TYNSL
Sbjct: 444 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 503

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K  K   A+ ++  +   G+ PN ITY TLL        +D   ++ ++M +   
Sbjct: 504 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 563

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    Y +L + LCK G   RA  +++ +V K      V Y T++    K G  + A  
Sbjct: 564 KPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAAT 620

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +    C+P   TY+ L+  L K+  + +A+ +  QM   GI      +  LI    
Sbjct: 621 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEML 680

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  + + A  +  E+   G+K   + Y + I+  CK  +++ A  ++  M      PD  
Sbjct: 681 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 740

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++ ++      G  + A+   ++++
Sbjct: 741 TYNILIDGCGHMGYIDRAFSTLKRMV 766



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 190/413 (46%), Gaps = 19/413 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE     +    C  G+  +A   I    R+       +   LI G  +    + A+ ++
Sbjct: 566 DEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 622

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  PD+ TY++++  LCK+ ++  A+ +LD+MS+ G +  +  Y  ++  M   
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A   + +    G  P   TYT+ I   CK+  +  A +++  M  EG +PD+VTY
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL-----------HSLGSRGCWD 344
           N L++     G  D A   +  ++    EPN  TY  LL            S+ + G W+
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 802

Query: 345 AVD-----KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            ++     ++L+ M +   +PTV TY+ LI G CK G ++ A    + M  K   P+   
Sbjct: 803 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 862

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  ++   C      +AL  + +++     P L +Y  L+ GL  +G  EK   L+  ++
Sbjct: 863 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           E G + D++  + L  G  +A  V+    +L  + KR   + +  Y LV + +
Sbjct: 923 ELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKM 975



 Score = 95.1 bits (235), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 1/250 (0%)

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           DA+  I    S  +  +   YN  L SL      + + ++   + +    P   TYN +I
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
              CK G +  A   F  ++    +P+  T N ++   C+ G L +A  L  ++    C 
Sbjct: 191 KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
               +Y  LI GL    C+ KA+VL+  M  +G SP+      LI G C++ +V +A  L
Sbjct: 251 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
              + + G       Y  +I G  K  +++ A+++ ELM  +   PDD  ++T++  + D
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 370

Query: 550 DGMTEEAYKL 559
              TEEA +L
Sbjct: 371 QK-TEEAEEL 379


>gi|242084804|ref|XP_002442827.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
 gi|241943520|gb|EES16665.1| hypothetical protein SORBIDRAFT_08g003450 [Sorghum bicolor]
          Length = 899

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 129/441 (29%), Positives = 204/441 (46%), Gaps = 4/441 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++  C  G++  A ++++ M  R  +P       +I G  +  R++ A  +  +M
Sbjct: 197 TYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKALM 256

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  PD  TYN+++ GLC   +   A  LL++  V G  P VIT+  I+       + 
Sbjct: 257 ERNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAERI 315

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+      L   C   L  Y +LI  + K+C    A E + +M   G +P++V Y S+
Sbjct: 316 DDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYTSI 375

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK   A+ V   +   G  PN+ TY++L++ L           ++  M E   
Sbjct: 376 IDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDGI 435

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V TY  LI G CK    D A   F  M      PD   YN +  ALCK G   EA  
Sbjct: 436 TPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAYS 495

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            L +  G   +   +TY +L+DG +K G  + A VL  +M+  G   D  T+  L+   C
Sbjct: 496 FL-VRKGVVLTK--VTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALC 552

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  ++ EA+ +L ++   G K    AY ++I  + K  K D A  +   MISS +KP  T
Sbjct: 553 KQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSAT 612

Query: 539 VFSTIVKKVADDGMTEEAYKL 559
            ++  +      G  EEA  L
Sbjct: 613 TYTVFISSYCKIGQIEEAEHL 633



 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/470 (28%), Positives = 232/470 (49%), Gaps = 41/470 (8%)

Query: 131 GKLTDASKLIDIMA----RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           G L  A  L+ +M     RRN+   + + I LI+GL     + +A  +L +MV  G   +
Sbjct: 139 GDLRKACWLLMMMPLMGCRRNE---YSYTI-LIQGLCETRCVREALVLLVMMVQDGCSLN 194

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY +++ GLCK G+I  A  +L+EM + G  P V TYN ++     +G+ K A+G   
Sbjct: 195 LHTYTLLIKGLCKEGRIHGARRVLEEMPLRGVVPSVWTYNAMIDGYCKSGRMKDALGIKA 254

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
              R GC P   TY ILI  +C +     A E+L+D  + G +P ++T+ +++N  CK  
Sbjct: 255 LMERNGCNPDDWTYNILIYGLCGE-KPDEAEELLNDAIVRGFTPTVITFTNIINGYCKAE 313

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           + DDA+ V  ++LS   + +   Y  L++ L  +  +    + +  M     +P V  Y 
Sbjct: 314 RIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRFKEAKETVSEMFANGLAPNVVIYT 373

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +I+G CK G V  A+  F  M  + C+P+  TY++++  L ++  L++A+ L+  +   
Sbjct: 374 SIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQED 433

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
             +P +ITY TLI G  KK   + A  L+  M +NG++PD+  +  L    C++ + EEA
Sbjct: 434 GITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEA 493

Query: 487 VDLLKEIG----------------KRGN---------KMRNSA-------YRLVIHGLCK 514
              L   G                K GN         KM N         Y +++  LCK
Sbjct: 494 YSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQALCK 553

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            KK++ A+ +L+ M  S  K +   ++ I+ ++  +G  + A  ++ ++I
Sbjct: 554 QKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMI 603



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 217/476 (45%), Gaps = 29/476 (6%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+  +C  GK+  A ++  +M      P+     +LI GLI+  ++ KA  ++  M   G
Sbjct: 375 IIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSLIYGLIQDQKLHKAMALITKMQEDG 434

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P  ITY  ++ G CK+ +  +A  L + M  +G  PD   YN +   +  +G+ ++A 
Sbjct: 435 ITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGLTPDEQAYNVLTHALCKSGRAEEAY 494

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            F    +RKG     +TYT L++   K      A  +++ M  EGC  D  TY+ L+   
Sbjct: 495 SFL---VRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIEKMVNEGCKADSYTYSVLLQAL 551

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CKQ K ++A+ +++ +   G++ N + Y  ++  +   G  D    + + M  + H P+ 
Sbjct: 552 CKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMFNEMISSGHKPSA 611

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY + I+  CK G ++ A +   +M      PD+VTYN  +      G ++ A   L  
Sbjct: 612 TTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHMGYMDRAFSTLKR 671

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMV----------------LYGQMMENGISPD 466
           +  +SC P   TY  L+    K   ++   V                L  +M+++G++P 
Sbjct: 672 MIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQLLERMVKHGLNPT 731

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+ ++I GFC+A ++EEA  L   +  +        Y ++I   C  K    A+  + 
Sbjct: 732 AVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCDIKLFGKAVSFVT 791

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL----------IEWKVFEKG 572
            MI   ++P    +  ++  + D+G  ++A  L+  L          + WK+   G
Sbjct: 792 DMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEVAWKILNDG 847



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/471 (25%), Positives = 218/471 (46%), Gaps = 33/471 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G++ DA  +  +M R    PD      LI GL   ++ ++A ++L   
Sbjct: 232 TYNAMIDGYCKSGRMKDALGIKALMERNGCNPDDWTYNILIYGLCG-EKPDEAEELLNDA 290

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           ++ G  P  IT+  ++ G CK  +I  A+ +   M  S C+ D+  Y  ++  +    +F
Sbjct: 291 IVRGFTPTVITFTNIINGYCKAERIDDALRVKTSMLSSNCKLDLQAYGVLINVLIKKCRF 350

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A     +    G  P ++ YT +I+  CK   +  A+EV   M  EGC P+  TY+SL
Sbjct: 351 KEAKETVSEMFANGLAPNVVIYTSIIDGYCKVGKVGAALEVFRLMEHEGCRPNAWTYSSL 410

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    +  K   A+ +I  +   G+ P  ITY TL+     +  +D   ++ ++M +   
Sbjct: 411 IYGLIQDQKLHKAMALITKMQEDGITPGVITYTTLIQGQCKKHEFDNAFRLFEMMEQNGL 470

Query: 359 SPTVFTYNILINGLCKYGLVDRA-------------------INSFN------------- 386
           +P    YN+L + LCK G  + A                   ++ F+             
Sbjct: 471 TPDEQAYNVLTHALCKSGRAEEAYSFLVRKGVVLTKVTYTSLVDGFSKAGNTDFAAVLIE 530

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +MV++ C+ D  TY+ +L ALCK+  LNEAL +L  +  S     ++ Y  +I  + K+G
Sbjct: 531 KMVNEGCKADSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEG 590

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
             + A  ++ +M+ +G  P   T+   I  +C+  Q+EEA  L+ E+ + G       Y 
Sbjct: 591 KHDHAKSMFNEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYN 650

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           + I+G      +D A   L+ MI +  +P+   +  ++K      + +  Y
Sbjct: 651 VFINGCGHMGYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHY 701



 Score =  103 bits (256), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 83/340 (24%), Positives = 136/340 (40%), Gaps = 52/340 (15%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + +LQ  C + KL +A  ++D M       +      +I  +I+  + + A  + 
Sbjct: 540 DSYTYSVLLQALCKQKKLNEALSILDQMTLSGVKCNIVAYTIIISEMIKEGKHDHAKSMF 599

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+ SG  P   TY + +   CK GQI  A  L+ EM   G  PDV+TYN  +      
Sbjct: 600 NEMISSGHKPSATTYTVFISSYCKIGQIEEAEHLIGEMERDGVAPDVVTYNVFINGCGHM 659

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC----------GIARAIEV------ 279
           G   +A    K  +   C P   TY IL++   K            G+   IE+      
Sbjct: 660 GYMDRAFSTLKRMIDASCEPNYWTYWILLKHFLKMSLVDAHYVDTSGMWNWIELDTVWQL 719

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L+ M   G +P  VTY+S++   CK  + ++A ++ +++  + + PN   Y  L+     
Sbjct: 720 LERMVKHGLNPTAVTYSSIIAGFCKATRLEEACVLFDHMRGKDISPNEEIYTMLIKCCCD 779

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF-------------- 385
              +      +  M E    P + +Y+ LI GLC  G  D+A + F              
Sbjct: 780 IKLFGKAVSFVTDMIEFGFQPHLESYHYLIVGLCDEGDYDKAKSLFCDLLGMEDYNHNEV 839

Query: 386 ----------------------NQMVSKNCQPDIVTYNTV 403
                                 + M +++CQ D  TY+ V
Sbjct: 840 AWKILNDGLLKAGHVDFCSQLLSAMENRHCQIDSETYSMV 879


>gi|224053663|ref|XP_002297917.1| predicted protein [Populus trichocarpa]
 gi|222845175|gb|EEE82722.1| predicted protein [Populus trichocarpa]
          Length = 670

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 115/384 (29%), Positives = 201/384 (52%), Gaps = 8/384 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++  C  G + DA ++   M  R   PD +    L+ GL + DRI++A  +L  M
Sbjct: 201 TFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEM 260

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            + G  P  +T+N+++ GLCK+G +  A  L+D M + GC P+ +TYNT++  +   GK 
Sbjct: 261 QIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKL 320

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE---VLDDMAIEGCSPDIVTY 295
           ++AI      +   C P ++TY  +I  + KQ    RA++   VL  M   G   +   Y
Sbjct: 321 EKAISLLDRMVSSKCVPNVVTYGTIINGLVKQ---GRALDGACVLALMEERGYCVNEYVY 377

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++   K+GK  +A+ +   +  +G E N+I Y+ ++  L   G  D   ++L  M  
Sbjct: 378 STLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPDDAVEVLSEMTN 437

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P  +T + L+ G  + G   RA+  +  M   N   + V Y+ ++  LCK+G + E
Sbjct: 438 KGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLIHGLCKDGKVKE 497

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG--ISPDDITHRTL 473
           A+ +   + G  C P ++ Y+++I+GL+  G +E AM LY +M+  G    PD +T+  L
Sbjct: 498 AMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPDSQPDVVTYNIL 557

Query: 474 IWGFCRADQVEEAVDLLKEIGKRG 497
           +   C+   +  A+DLL  +  RG
Sbjct: 558 LNTLCKQSSISRAIDLLNSMLDRG 581



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/453 (25%), Positives = 241/453 (53%), Gaps = 19/453 (4%)

Query: 127 FCSRGKLTDASKLIDIMAR-------RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           F + GK     K +D+  R       +     F+  +N+I   I+     +A +    ++
Sbjct: 132 FKAYGKAHLPEKAVDLFDRMACEFECKRTGKSFNSVLNVI---IQEGLFHRALEFYNHVI 188

Query: 180 MSGGV---PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            + GV   P+ +T+N+++  +CK G +  AI +  +M++  CEPDV TY T++  +    
Sbjct: 189 GAKGVSISPNVLTFNLVIKAMCKVGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKAD 248

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +  +A+    +    GC P  +T+ +LI  +CK+  ++RA +++D+M ++GC P+ VTYN
Sbjct: 249 RIDEAVSLLDEMQIDGCFPSPVTFNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYN 308

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK--ILDIMN 354
           +L++  C +GK + A+ +++ ++S    PN +TY T+++ L  +G   A+D   +L +M 
Sbjct: 309 TLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQG--RALDGACVLALME 366

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E  +    + Y+ LI+GL K G    A++ F +M  K  + + + Y+ V+  LC++G  +
Sbjct: 367 ERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRDGKPD 426

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A+++L  +    C+P   T ++L+ G  + G   +A+ ++  M ++  + +++ +  LI
Sbjct: 427 DAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCYSVLI 486

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI--SSR 532
            G C+  +V+EA+ +  ++  +G K    AY  +I+GL  +  V+ A+Q+   M+     
Sbjct: 487 HGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAGLVEDAMQLYNEMLCQGPD 546

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +PD   ++ ++  +        A  L   +++
Sbjct: 547 SQPDVVTYNILLNTLCKQSSISRAIDLLNSMLD 579



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 91/297 (30%), Positives = 151/297 (50%), Gaps = 8/297 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++   C +GKL  A  L+D M     +P+      +I GL++  R    + VL
Sbjct: 303 NEVTYNTLIHGLCLKGKLEKAISLLDRMVSSKCVPNVVTYGTIINGLVKQGRALDGACVL 362

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M   G   +   Y+ ++ GL K G+ + A+ L  EM+V G E + I Y+ ++  +  +
Sbjct: 363 ALMEERGYCVNEYVYSTLISGLFKEGKSQEAMHLFKEMTVKGYELNTIVYSAVIDGLCRD 422

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+    +   KGC P   T + L++   +     RA+EV  DMA    + + V Y
Sbjct: 423 GKPDDAVEVLSEMTNKGCTPNAYTCSSLMKGFFEAGNSHRAVEVWKDMAKHNFTQNEVCY 482

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L++  CK GK  +A++V   +L +G +P+ + Y+++++ L   G    V+  + + NE
Sbjct: 483 SVLIHGLCKDGKVKEAMMVWTQMLGKGCKPDVVAYSSMINGLSIAG---LVEDAMQLYNE 539

Query: 356 -----ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
                    P V TYNIL+N LCK   + RAI+  N M+ + C PD+VT    L  L
Sbjct: 540 MLCQGPDSQPDVVTYNILLNTLCKQSSISRAIDLLNSMLDRGCDPDLVTCTIFLRML 596



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 131/243 (53%), Gaps = 4/243 (1%)

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           T+ +L+++  + G + +++K+LD M           + ++     K  L ++A++ F++M
Sbjct: 92  TFYSLINNYANLGDFKSLEKVLDRMKCEKRVIFEKCFIVIFKAYGKAHLPEKAVDLFDRM 151

Query: 389 VSK-NCQPDIVTYNTVLGALCKEGMLNEALQLL-HLL--NGSSCSPCLITYNTLIDGLAK 444
             +  C+    ++N+VL  + +EG+ + AL+   H++   G S SP ++T+N +I  + K
Sbjct: 152 ACEFECKRTGKSFNSVLNVIIQEGLFHRALEFYNHVIGAKGVSISPNVLTFNLVIKAMCK 211

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G ++ A+ ++  M      PD  T+ TL+ G C+AD+++EAV LL E+   G       
Sbjct: 212 VGLVDDAIQVFRDMTIRKCEPDVYTYCTLMDGLCKADRIDEAVSLLDEMQIDGCFPSPVT 271

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + ++I+GLCK   +  A ++++ M      P++  ++T++  +   G  E+A  L  +++
Sbjct: 272 FNVLINGLCKKGDLSRAAKLVDNMFLKGCIPNEVTYNTLIHGLCLKGKLEKAISLLDRMV 331

Query: 565 EWK 567
             K
Sbjct: 332 SSK 334


>gi|125556563|gb|EAZ02169.1| hypothetical protein OsI_24261 [Oryza sativa Indica Group]
          Length = 991

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 225/485 (46%), Gaps = 39/485 (8%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + +E +   ++Q  C    + +A  L  +M R    P+      LI GL +  R+  A  
Sbjct: 250 QRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARL 309

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M  +G VP  +TYN M+ G  K G++  A+ + + M  +GC PD  TYNT++  + 
Sbjct: 310 LFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC 369

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC------------------------- 268
           D  K ++A     + +++G  P ++T+T LI   C                         
Sbjct: 370 DQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 428

Query: 269 ----------KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
                     K+  +  A E+L++++  G  P+++TY S+++  CK GK D A+ V+  +
Sbjct: 429 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 488

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G +PN+ TYN+L++ L           +L  M +    P V TY  L+ G C     
Sbjct: 489 ERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDF 548

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A   F  M     +PD   Y  +  ALCK G   EA   + +  G + +   + Y TL
Sbjct: 549 DNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI-VRKGVALTK--VYYTTL 605

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           IDG +K G  + A  L  +M++ G +PD  T+  L+   C+  ++ EA+ +L ++  RG 
Sbjct: 606 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 665

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           K    AY ++I  + +  K D A ++   M SS +KP  T ++  +     +G  E+A  
Sbjct: 666 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 725

Query: 559 LWQKL 563
           L  K+
Sbjct: 726 LILKM 730



 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 130/455 (28%), Positives = 222/455 (48%), Gaps = 12/455 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKA 171
           +E +  T N ++  +C  G+L  A  L  +M     Q  ++ + I LI+GL     + +A
Sbjct: 214 LEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTI-LIQGLCEAKCVREA 272

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +  +M   G  P+   +  ++ GLCK G++  A  L D M  +G  P V+TYN ++  
Sbjct: 273 LVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVG 332

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G+   A+   +   + GC P   TY  LI  +C Q     A E+L++   EG +P 
Sbjct: 333 YSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPT 391

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VT+ +L+N  C   K+DDA+ + N ++S   + +   +  L++SL  +   D + +  +
Sbjct: 392 VVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK---DRLKEAKE 448

Query: 352 IMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           ++NE S +   P V TY  +I+G CK G VD A+     M    CQP+  TYN+++  L 
Sbjct: 449 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 508

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K+  L++A+ LL  +      P +ITY TL+ G   +   + A  L+  M +NG+ PD+ 
Sbjct: 509 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 568

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            +  L    C+A + EEA      I ++G  +    Y  +I G  K+   D A  ++E M
Sbjct: 569 AYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 625

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           I     PD   +S ++  +       EA  +  ++
Sbjct: 626 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 660



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 233/546 (42%), Gaps = 92/546 (16%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C   K  DA ++ + M       D      LI  LI+ DR+++A ++L  +
Sbjct: 394 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 453

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G VP+ ITY  ++ G CK G++  A+ +L  M   GC+P+  TYN+++  +  + K 
Sbjct: 454 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 513

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+       + G  P +ITYT L++  C +     A  + + M   G  PD   Y  L
Sbjct: 514 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 573

Query: 299 VNFSCKQGKYDDA--------------------------------VLVINNLLSRGMEPN 326
            +  CK G+ ++A                                  +I  ++  G  P+
Sbjct: 574 TDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 633

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           S TY+ LLH+L  +   +    ILD M+      T+F Y ILI+ + + G  D A   +N
Sbjct: 634 SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYN 693

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M S   +P   TY   + + CKEG L +A  L+  +     +P ++TYN LIDG    G
Sbjct: 694 EMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 753

Query: 447 CMEKAMV---------------------------------------------------LY 455
            +++A                                                     L 
Sbjct: 754 YIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLL 813

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M+++G++P   T+ +LI GFC+A ++EEA  LL  +  +G       Y L+I   C +
Sbjct: 814 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 873

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE---------W 566
           K  + A+  + +M    ++P    +  +V  + ++G  E+   L+  L+E         W
Sbjct: 874 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 933

Query: 567 KVFEKG 572
           K+   G
Sbjct: 934 KILNDG 939



 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 111/411 (27%), Positives = 212/411 (51%), Gaps = 1/411 (0%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +PD      +I+   +   +  A +  ++++  G  P+T T N +V G C+ G++R A  
Sbjct: 180 LPDTVTYNTMIKSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACW 239

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           L   M + GC+ +  +Y  +++ + +    ++A+  +    R GC P +  +T LI  +C
Sbjct: 240 LFLMMPLMGCQRNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLC 299

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   +  A  + D M   G  P ++TYN+++    K G+ +DA+ +   +   G  P+  
Sbjct: 300 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDW 359

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TYNTL++ L  +   +A +++L+   +   +PTV T+  LING C     D A+   N+M
Sbjct: 360 TYNTLIYGLCDQKTEEA-EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 418

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           +S  C+ D+  +  ++ +L K+  L EA +LL+ ++ +   P +ITY ++IDG  K G +
Sbjct: 419 MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKV 478

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           + A+ +   M  +G  P+  T+ +L++G  +  ++ +A+ LL ++ K G       Y  +
Sbjct: 479 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTL 538

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           + G C     D A ++ E+M  +  KPD+  ++ +   +   G  EEAY  
Sbjct: 539 LQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 589



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 223/487 (45%), Gaps = 53/487 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I+  +C  GK+  A +++ +M R    P+     +L+ GL++  ++ KA  +L  M
Sbjct: 464 TYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKM 523

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +P+ ITY  ++ G C      +A  L + M  +G +PD   Y  +   +   G+ 
Sbjct: 524 QKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRA 583

Query: 239 KQAIGFW--------------------------------KDQLRKGCPPYLITYTILIEQ 266
           ++A  F                                 +  + +GC P   TY++L+  
Sbjct: 584 EEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHA 643

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +CKQ  +  A+ +LD M++ G    I  Y  L++   ++GK+D A  + N + S G +P+
Sbjct: 644 LCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 703

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           + TY   ++S    G  +  + ++  M     +P V TYNILI+G    G +DRA ++  
Sbjct: 704 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 763

Query: 387 QMVSKNCQPDIVTYNTVLGALCK-----------EGM-----LNEALQLLHLLNGSSCSP 430
           +MV  +C+P+  TY  +L  L K            GM     L+   QLL  +     +P
Sbjct: 764 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 823

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            + TY++LI G  K G +E+A +L   M   G+SP++  +  LI   C     E+A+  +
Sbjct: 824 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 883

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
             + + G + +  +YRL++ GLC     +    +   ++   Y  D+  +     K+ +D
Sbjct: 884 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW-----KILND 938

Query: 551 GMTEEAY 557
           G+ +  Y
Sbjct: 939 GLLKAGY 945



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 206/446 (46%), Gaps = 4/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +   G++ DA K+ ++M +    PD      LI GL    + E+A ++L   
Sbjct: 325 TYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNA 383

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P  +T+  ++ G C   +   A+ + ++M  S C+ D+  +  ++ ++    + 
Sbjct: 384 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 443

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A     +    G  P +ITYT +I+  CK   +  A+EVL  M  +GC P+  TYNSL
Sbjct: 444 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 503

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K  K   A+ ++  +   G+ PN ITY TLL        +D   ++ ++M +   
Sbjct: 504 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 563

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    Y +L + LCK G   RA  +++ +V K      V Y T++    K G  + A  
Sbjct: 564 KPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAAT 620

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +    C+P   TY+ L+  L K+  + +A+ +  QM   GI      +  LI    
Sbjct: 621 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEML 680

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  + + A  +  E+   G+K   + Y + I+  CK  +++ A  ++  M      PD  
Sbjct: 681 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 740

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++ ++      G  + A+   ++++
Sbjct: 741 TYNILIDGCGHMGYIDRAFSTLKRMV 766



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 190/413 (46%), Gaps = 19/413 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE     +    C  G+  +A   I    R+       +   LI G  +    + A+ ++
Sbjct: 566 DEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 622

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  PD+ TY++++  LCK+ ++  A+ +LD+MS+ G +  +  Y  ++  M   
Sbjct: 623 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 682

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A   + +    G  P   TYT+ I   CK+  +  A +++  M  EG +PD+VTY
Sbjct: 683 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 742

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL-----------HSLGSRGCWD 344
           N L++     G  D A   +  ++    EPN  TY  LL            S+ + G W+
Sbjct: 743 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 802

Query: 345 AVD-----KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            ++     ++L+ M +   +PTV TY+ LI G CK G ++ A    + M  K   P+   
Sbjct: 803 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 862

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  ++   C      +AL  + +++     P L +Y  L+ GL  +G  EK   L+  ++
Sbjct: 863 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 922

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           E G + D++  + L  G  +A  V+    +L  + KR   + +  Y LV + +
Sbjct: 923 ELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKM 975



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 116/250 (46%), Gaps = 1/250 (0%)

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           DA+  I    S  +  +   YN  L SL      + + ++   + +    P   TYN +I
Sbjct: 131 DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 190

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
              CK G +  A   F  ++    +P+  T N ++   C+ G L +A  L  ++    C 
Sbjct: 191 KSYCKEGDLTTAHRCFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 250

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
               +Y  LI GL +  C+ +A+VL+  M  +G SP+      LI G C++ +V +A  L
Sbjct: 251 RNEYSYTILIQGLCEAKCVREALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 310

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
              + + G       Y  +I G  K  +++ A+++ ELM  +   PDD  ++T++  + D
Sbjct: 311 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 370

Query: 550 DGMTEEAYKL 559
              TEEA +L
Sbjct: 371 QK-TEEAEEL 379


>gi|296088470|emb|CBI37461.3| unnamed protein product [Vitis vinifera]
          Length = 822

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 118/457 (25%), Positives = 229/457 (50%), Gaps = 14/457 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  +C   +L +A  L ++M  +  +PD      LI GL R  ++E+ + +  + 
Sbjct: 277 TFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVIYSILINGLFRAGKLEEGNSLFSMA 336

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   D + ++ ++    + G +  AI +   M   G  P+V+TY+ ++  +  NG+ 
Sbjct: 337 LARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRV 396

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A G +   L++G  P ++TY+ LI+  CK   +     +   M  +G  PD+V  + L
Sbjct: 397 LEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSML 456

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW------DAVDKILDI 352
           +N   +QG  D+A+      + RG+  N+  +N L+      GC+      D + K+  +
Sbjct: 457 INGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALID-----GCFRLKRTRDGL-KMYIL 510

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P V TY +L+ GL + G +D A+  F Q++ K   PD + Y T++   CK+  
Sbjct: 511 MGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRD 570

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
               LQ+  L+  +   P +  YN LI+   ++GC+E  + L  ++++ G+ PD +T+ T
Sbjct: 571 PATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNT 630

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +I G+C      +A+ L  E+ K G    N+  + ++I   CK  ++D A+ +   M+  
Sbjct: 631 MICGYCSLKIFSKAIKLF-EVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLER 689

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +P+   +S ++        TE A++L++K++  +V
Sbjct: 690 GPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRV 726



 Score =  191 bits (485), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 105/371 (28%), Positives = 189/371 (50%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC    L D   L  IM R+  +PD   C  LI GL R   +++A +     
Sbjct: 417 TYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQA 476

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G   +   +N ++ G  +  + R  + +   M +    PDV+TY  +++ + + G+ 
Sbjct: 477 VKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRL 536

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+  +   L+KG  P  I Y  LI+  CK+   A  +++   M   G  PDI  YN L
Sbjct: 537 DEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVL 596

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   ++G  ++ + ++  ++  G+EP+ +TYNT++    S   +    K+ +++     
Sbjct: 597 INMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRT 656

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   T+ ILI+  CK G +D A+  F+ M+ +  +P+I+TY+ ++    K      A +
Sbjct: 657 QPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFE 716

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   + G   SP +++Y+ LIDGL KKG ME+A + +   +   + PD I +  LI G+C
Sbjct: 717 LYEKMLGDRVSPNIVSYSILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYC 776

Query: 479 RADQVEEAVDL 489
           +  ++ EA+ L
Sbjct: 777 KVGRLAEAMML 787



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 209/453 (46%), Gaps = 2/453 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D    + I+  +   G L  A ++   M +    P+      LI GL R  R+ +A 
Sbjct: 341 VKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTYSILINGLCRNGRVLEAC 400

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V   ++  G  P  +TY+ ++ G CK   +R    L   M   G  PDV+  + ++  +
Sbjct: 401 GVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLRKGHVPDVVVCSMLINGL 460

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   +A+ F+   +++G       +  LI+   +       +++   M +    PD+
Sbjct: 461 SRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRDGLKMYILMGMYKVIPDV 520

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  LV    +QG+ D+A+ +   LL +G  P+ I Y TL+     +       +I  +
Sbjct: 521 VTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIFKL 580

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P +  YN+LIN   + G V+  +    +++    +PDIVTYNT++   C   +
Sbjct: 581 MQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSLKI 640

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            ++A++L  +L      P  IT+  LID   K G M+ AM+++  M+E G  P+ +T+  
Sbjct: 641 FSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTYSC 700

Query: 473 LIWGFCRADQVEEAVDLL-KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           LI G+ + +  E A +L  K +G R +     +Y ++I GLCK   ++ A    +  I  
Sbjct: 701 LIDGYFKTENTESAFELYEKMLGDRVSP-NIVSYSILIDGLCKKGLMEEASLAFQCAIGR 759

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              PD   +  +++     G   EA  L+  ++
Sbjct: 760 HLLPDVIAYGILIRGYCKVGRLAEAMMLYDHML 792



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 121/498 (24%), Positives = 221/498 (44%), Gaps = 74/498 (14%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           GKL + + L  +   R    D     +++   +R+  + KA +V   M+  G  P+ +TY
Sbjct: 324 GKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRMLKEGISPNVVTY 383

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           ++++ GLC+ G++  A  +  ++   G EP V+TY++++     +   +   G +   LR
Sbjct: 384 SILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLRDGFGLYGIMLR 443

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEV--------------LDDMAIEGCS------- 289
           KG  P ++  ++LI  + +Q  +  A+                L +  I+GC        
Sbjct: 444 KGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALIDGCFRLKRTRD 503

Query: 290 --------------PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
                         PD+VTY  LV    +QG+ D+A+ +   LL +G  P+ I Y TL+ 
Sbjct: 504 GLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLID 563

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
               +       +I  +M      P +  YN+LIN   + G V+  +    +++    +P
Sbjct: 564 GFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEP 623

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           DIVTYNT++   C   + ++A++L  +L      P  IT+  LID   K G M+ AM+++
Sbjct: 624 DIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIF 683

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE-------------------IGKR 496
             M+E G  P+ +T+  LI G+ + +  E A +L ++                   + K+
Sbjct: 684 SSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDGLCKK 743

Query: 497 GNKMRNS----------------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           G     S                AY ++I G CK  ++  A+ + + M+ +   PDD   
Sbjct: 744 GLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPDD--- 800

Query: 541 STIVKKVADDGMTEEAYK 558
             + K +A+ G  +   K
Sbjct: 801 -LLQKALAEYGFQDSQAK 817



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 109/487 (22%), Positives = 222/487 (45%), Gaps = 40/487 (8%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           N     + +L  +C  G +  A      M++       +    ++  LI  DRI+   + 
Sbjct: 138 NPSTVYSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVILEN 197

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            + M    GV     Y  +     KRG++   +     +   G  P ++  N IL+ +  
Sbjct: 198 YEEMCKGLGV-----YEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKGLCM 252

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             +   A  F+   +R G  P L+T++ LI   CK+  +  A  + + M  +G  PD+V 
Sbjct: 253 GNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPDLVI 312

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ L+N   + GK ++   + +  L+RG++ + + +++++ +    G      ++   M 
Sbjct: 313 YSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYTRML 372

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +   SP V TY+ILINGLC+ G V  A   F Q++ +  +P ++TY++++   CK   L 
Sbjct: 373 KEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSENLR 432

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS---------- 464
           +   L  ++      P ++  + LI+GL+++G M++A+  + Q ++ G++          
Sbjct: 433 DGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFNALI 492

Query: 465 -------------------------PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
                                    PD +T+  L+ G     +++EA+ L  ++ K+G  
Sbjct: 493 DGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFS 552

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             +  Y  +I G CK +     +Q+ +LM S+   PD  +++ ++     +G  E   +L
Sbjct: 553 PDHIIYCTLIDGFCKKRDPATGLQIFKLMQSNGIFPDICIYNVLINMFFREGCVENVLEL 612

Query: 560 WQKLIEW 566
            +++I++
Sbjct: 613 LREIIKY 619



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 90/419 (21%), Positives = 192/419 (45%), Gaps = 41/419 (9%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P T+ Y+ ++   C+ G +  A+     MS  G        + +L  + D+ +    
Sbjct: 136 GSNPSTV-YSFLLHCYCRNGMVDRAVDTFAWMSKMGVSISHYAASEMLDLLIDSDRIDVI 194

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +  + +++ KG    L  Y  +     K+  + + +     +   G  P IV  N ++  
Sbjct: 195 LENY-EEMCKG----LGVYEFVFNSFLKRGEVEKGLNFHRALVERGLVPKIVDCNKILKG 249

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C   +   A    + ++  G  PN +T++TL++        D    + ++M E    P 
Sbjct: 250 LCMGNQIGVASDFFDMMVRSGPSPNLVTFSTLINVYCKELRLDEAFSLYNLMIEKGIVPD 309

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           +  Y+ILINGL + G ++   + F+  +++  + D+V +++++ A  + G L +A+++  
Sbjct: 310 LVIYSILINGLFRAGKLEEGNSLFSMALARGVKMDVVIFSSIMDAYVRVGDLGKAIEVYT 369

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +     SP ++TY+ LI+GL + G + +A  ++GQ+++ G+ P  +T+ +LI GFC+++
Sbjct: 370 RMLKEGISPNVVTYSILINGLCRNGRVLEACGVFGQILKQGLEPSVLTYSSLIDGFCKSE 429

Query: 482 QV-----------------------------------EEAVDLLKEIGKRGNKMRNSAYR 506
            +                                   +EA+    +  KRG  + N  + 
Sbjct: 430 NLRDGFGLYGIMLRKGHVPDVVVCSMLINGLSRQGMMDEALRFFFQAVKRGLTLNNYLFN 489

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +I G  + K+    +++  LM   +  PD   ++ +VK +A+ G  +EA  L+ +L++
Sbjct: 490 ALIDGCFRLKRTRDGLKMYILMGMYKVIPDVVTYTVLVKGLAEQGRLDEALALFFQLLK 548



 Score =  116 bits (290), Expect = 4e-23,   Method: Compositional matrix adjust.
 Identities = 88/363 (24%), Positives = 151/363 (41%), Gaps = 71/363 (19%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +++    +G+L +A  L   + ++   PD      LI G  +        ++ 
Sbjct: 519 DVVTYTVLVKGLAEQGRLDEALALFFQLLKKGFSPDHIIYCTLIDGFCKKRDPATGLQIF 578

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++M  +G  PD   YN+++    + G + + + LL E+   G EPD++TYNT++      
Sbjct: 579 KLMQSNGIFPDICIYNVLINMFFREGCVENVLELLREIIKYGLEPDIVTYNTMICGYCSL 638

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
             F +AI  ++        P  IT+TILI+  CK   +  A+ +   M   G  P+I+TY
Sbjct: 639 KIFSKAIKLFEVLKCGRTQPNAITFTILIDAYCKDGRMDDAMLIFSSMLERGPEPNILTY 698

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L++   K    + A  +   +L   + PN ++Y                         
Sbjct: 699 SCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSY------------------------- 733

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                     +ILI+GLCK GL++ A  +F   + ++  PD++ Y  ++   CK G L E
Sbjct: 734 ----------SILIDGLCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAE 783

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI- 474
                                              AM+LY  M+ NGI PDD+  + L  
Sbjct: 784 -----------------------------------AMMLYDHMLVNGIMPDDLLQKALAE 808

Query: 475 WGF 477
           +GF
Sbjct: 809 YGF 811



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 50/202 (24%), Positives = 95/202 (47%), Gaps = 2/202 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIM-ARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           +E D  T N ++  +CS    + A KL +++   R Q     F I LI    +  R++ A
Sbjct: 621 LEPDIVTYNTMICGYCSLKIFSKAIKLFEVLKCGRTQPNAITFTI-LIDAYCKDGRMDDA 679

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   M+  G  P+ +TY+ ++ G  K     SA  L ++M      P++++Y+ ++  
Sbjct: 680 MLIFSSMLERGPEPNILTYSCLIDGYFKTENTESAFELYEKMLGDRVSPNIVSYSILIDG 739

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   G  ++A   ++  + +   P +I Y ILI   CK   +A A+ + D M + G  PD
Sbjct: 740 LCKKGLMEEASLAFQCAIGRHLLPDVIAYGILIRGYCKVGRLAEAMMLYDHMLVNGIMPD 799

Query: 292 IVTYNSLVNFSCKQGKYDDAVL 313
            +   +L  +  +  +  + VL
Sbjct: 800 DLLQKALAEYGFQDSQAKNCVL 821


>gi|147817754|emb|CAN66662.1| hypothetical protein VITISV_031722 [Vitis vinifera]
          Length = 1060

 Score =  196 bits (498), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 119/428 (27%), Positives = 204/428 (47%), Gaps = 13/428 (3%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +P    C  ++ GL++  R +   KV   MV  G  P+ +TY  ++ G C++G    A  
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           L DEM      P V+ Y  ++R +    +  +A   ++     G  P L TY  +++  C
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   + +A+E+  +M  +G  P++VT+  L++  CK  +   A   + ++ S G+ PN  
Sbjct: 275 KIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            YN L+      G       +   + +    P VFTY+ILI GLC    ++ A     +M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             K   P+ VTYNT++   CKEG + +A+++   +      P +IT++TLIDG  K G M
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E AM LY +M+  G+ PD + +  LI G  +    +EA  L KE+ + G          +
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 509 IHGLCKSKKVDMAIQVL-------------ELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           I GLCK  ++  AI++                +  S   P+  +++ +++ +  DG   +
Sbjct: 515 IDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFK 574

Query: 556 AYKLWQKL 563
           A K +  +
Sbjct: 575 ASKFFSDM 582



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 207/437 (47%), Gaps = 15/437 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L     +G+     K+   M  R   P+      LI G  R     KA ++   M+ 
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P  + Y +++ GLC   +I  A ++   M  SG  P++ TYNT++         K+
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  + + L  G  P ++T+ ILI+ +CK   +  A + L DMA  G  P+I  YN L++
Sbjct: 282 ALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G   +A+ + + +    + P+  TY+ L+  L      +  D +L  M +    P
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN LI+G CK G +++AI   +QM  K  +P+I+T++T++   CK G +  A+ L 
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++ Y  LIDG  K G  ++A  L+ +M E G+ P+  T   LI G C+ 
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 481 DQVEEAVDLL------KEIGKRGNKMRNS-------AYRLVIHGLCKSKKVDMAIQVLEL 527
            ++ +A+ L          G + N++  S        Y  +I GLC   ++  A +    
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD 581

Query: 528 MISSRYKPDDTVFSTIV 544
           M  S  +PD  VF+ IV
Sbjct: 582 MRCSGLRPD--VFTCIV 596



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 109/413 (26%), Positives = 202/413 (48%), Gaps = 13/413 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C   ++++A  +   M     +P+ +    ++ G  +I  ++KA ++   M+  G
Sbjct: 234 LIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDG 293

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +P+ +T+ +++ GLCK  ++ SA   L +M+  G  P++  YN ++      G   +A+
Sbjct: 294 LLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEAL 353

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               +  +    P + TY+ILI+ +C    +  A  +L +M  +G  P+ VTYN+L++  
Sbjct: 354 SLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGY 413

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK+G  + A+ V + +  +G+EPN IT++TL+      G  +A   +   M      P V
Sbjct: 414 CKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDV 473

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-- 420
             Y  LI+G  K G    A     +M      P++ T + ++  LCK+G +++A++L   
Sbjct: 474 VAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLA 533

Query: 421 -----------HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
                      + L+ S CSP  + Y  LI GL   G + KA   +  M  +G+ PD  T
Sbjct: 534 KTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDVFT 593

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
              +I G  RA  + + + L  +I K G    +S YR++  G  +S  +  A+
Sbjct: 594 CIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSAL 646



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 112/453 (24%), Positives = 207/453 (45%), Gaps = 17/453 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C +G    A +L D M  +   P       LIRGL    RI +A  + + M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG +P+  TYN M+ G CK   ++ A+ L  EM   G  P+V+T+  ++  +    + 
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F  D    G  P +  Y  LI+  CK   ++ A+ +  ++      PD+ TY+ L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C   + ++A  ++  +  +G  PN++TYNTL+      G  +   ++   M E   
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + T++ LI+G CK G ++ A+  + +MV K   PD+V Y  ++    K+G   EA +
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY-------------GQMMENGISP 465
           L   +  +   P + T + LIDGL K G +  A+ L+              ++  +  SP
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSP 554

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR--LVIHGLCKSKKVDMAIQ 523
           + + +  LI G C   ++ +A     ++  R + +R   +   ++I G  ++  +   + 
Sbjct: 555 NHVMYTALIQGLCTDGRIFKASKFFSDM--RCSGLRPDVFTCIVIIQGHFRAMHLRDVMM 612

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           +   ++     P+ +V+  + K   + G  + A
Sbjct: 613 LQADILKMGIIPNSSVYRVLAKGYEESGYLKSA 645



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 105/387 (27%), Positives = 185/387 (47%), Gaps = 13/387 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C    +  A +L   M     +P+      LI GL + D +  A K L  M
Sbjct: 265 TYNTMMDGYCKIAHVKKALELYXEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDM 324

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VP+   YN ++ G CK G +  A++L  E+      PDV TY+ +++ +    + 
Sbjct: 325 ASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRM 384

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A G  ++  +KG  P  +TY  LI+  CK+  + +AIEV   M  +G  P+I+T+++L
Sbjct: 385 EEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTL 444

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK + A+ +   ++ +G+ P+ + Y  L+      G      ++   M EA  
Sbjct: 445 IDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGL 504

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSF-------------NQMVSKNCQPDIVTYNTVLG 405
            P VFT + LI+GLCK G +  AI  F             N++    C P+ V Y  ++ 
Sbjct: 505 HPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQ 564

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            LC +G + +A +    +  S   P + T   +I G  +   +   M+L   +++ GI P
Sbjct: 565 GLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMGIIP 624

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKE 492
           +   +R L  G+  +  ++ A+    E
Sbjct: 625 NSSVYRVLAKGYEESGYLKSALSFCGE 651



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 187/380 (49%), Gaps = 11/380 (2%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           + +++    + G +  A+ +  +M V    P +   N +L  +   G+F      + D +
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            +G  P ++TY  LI+  C+Q    +A  + D+M  +   P +V Y  L+   C + +  
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDKILDIMNEASHS---PTVFTY 365
           +A  +   + + GM PN  TYNT++       C  A V K L++  E       P V T+
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGY----CKIAHVKKALELYXEMLGDGLLPNVVTF 301

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
            ILI+GLCK   +  A      M S    P+I  YN ++   CK G L+EAL L   +  
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P + TY+ LI GL     ME+A  L  +M + G  P+ +T+ TLI G+C+   +E+
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+++  ++ ++G +     +  +I G CK+ K++ A+ +   M+     PD   ++ ++ 
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 546 KVADDGMTEEAYKLWQKLIE 565
               DG T+EA++L +++ E
Sbjct: 482 GHFKDGNTKEAFRLHKEMQE 501



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 95/487 (19%), Positives = 185/487 (37%), Gaps = 60/487 (12%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T + ++  +C  GK+  A  L   M  +  +PD      LI G  +    ++A 
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + M  +G  P+  T + ++ GLCK G+I  AI L   ++ +G +      N + R++
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSL 551

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                               C P  + YT LI+ +C    I +A +   DM   G  PD+
Sbjct: 552 --------------------CSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDV 591

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG--------CWD 344
            T   ++    +     D +++  ++L  G+ PNS  Y  L       G        C +
Sbjct: 592 FTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVLAKGYEESGYLKSALSFCGE 651

Query: 345 AVDKILDIMNEASHSPTV---FTYNILING-------LCKYGLVDRAINSFNQMVSKNCQ 394
            V  +  + +E   S T+   F   ++          L  +G+    +  +   + K   
Sbjct: 652 GVQPLDRVNSEPWGSYTIRSRFQLCVVTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPS 711

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P  +           +   N+ALQL   +      P ++T    +   A  G ++    +
Sbjct: 712 PHEILKKVPFIGQKGDQRPNKALQLFRQMQMDDXQPDIVTVTVALSACADLGALDMGEWI 771

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +  +   G+  D   + +LI  + +  ++  A  L    G +   +      +V H L  
Sbjct: 772 HAYIRHRGLDTDLCLNNSLINMYSKCGEIGTARRLFD--GTQKKDVTTWTSMIVGHAL-- 827

Query: 515 SKKVDMAIQVLELMI----------------SSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
             + + A+Q+   M                 SS   P+D  F  ++   +  G+ EE  +
Sbjct: 828 HGQAEEALQLFTEMKETNKRARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQ 887

Query: 559 LWQKLIE 565
            ++ + E
Sbjct: 888 HFRSMKE 894



 Score = 65.5 bits (158), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 80/396 (20%), Positives = 158/396 (39%), Gaps = 53/396 (13%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++Q  C+ G++  ASK    M      PD   CI +I+G  R   +     +   ++  G
Sbjct: 562 LIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMG 621

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP-DVITY----NTILRTMFD--- 234
            +P++  Y ++  G  + G ++SA++   E    G +P D +      +  +R+ F    
Sbjct: 622 IIPNSSVYRVLAKGYEESGYLKSALSFCGE----GVQPLDRVNSEPWGSYTIRSRFQLCV 677

Query: 235 -------NGKFKQAIG--------FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
                  +  +  A G        ++   L+   P  ++     I Q   Q    +A+++
Sbjct: 678 VTEKKECHSSYLTAFGIHSFVLLWYFHTILKPPSPHEILKKVPFIGQKGDQ-RPNKALQL 736

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
              M ++   PDIVT    ++     G  D    +   +  RG++ +    N+L++    
Sbjct: 737 FRQMQMDDXQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINMYSK 796

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ----- 394
            G      ++ D     +    V T+  +I G   +G  + A+  F +M   N +     
Sbjct: 797 CGEIGTARRLFD----GTQKKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNKRARKNK 852

Query: 395 -----------PDIVTYNTVLGALCKEGMLNEALQLLHLLNGS-SCSPCLITYNTLIDGL 442
                      P+ VT+  VL A    G++ E  Q    +    S  P +  +  ++D L
Sbjct: 853 RNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFGCMVDLL 912

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            + G + +A   Y  +++  + P+ +  RTL+ G C
Sbjct: 913 CRAGLLTEA---YEFILKMPVRPNAVVWRTLL-GAC 944



 Score = 39.7 bits (91), Expect = 4.2,   Method: Compositional matrix adjust.
 Identities = 61/287 (21%), Positives = 112/287 (39%), Gaps = 47/287 (16%)

Query: 206  AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL--RKGCPPYLITYTIL 263
            A+ L  +M +   +PD++T    L    D G     +G W       +G    L     L
Sbjct: 733  ALQLFRQMQMDDXQPDIVTVTVALSACADLGALD--MGEWIHAYIRHRGLDTDLCLNNSL 790

Query: 264  IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL---- 319
            I    K   I  A  + D         D+ T+ S++      G+ ++A+ +   +     
Sbjct: 791  INMYSKCGEIGTARRLFDGTQ----KKDVTTWTSMIVGHALHGQAEEALQLFTEMKETNK 846

Query: 320  ------------SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE-ASHSPTVFTYN 366
                        S  + PN +T+  +L +    G  +   +    M E  S  P +  + 
Sbjct: 847  RARKNKRNGEXESSLVLPNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRPRISHFG 906

Query: 367  ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG-----------MLNE 415
             +++ LC+ GL+  A   +  ++    +P+ V + T+LGA   +G           + +E
Sbjct: 907  CMVDLLCRAGLLTEA---YEFILKMPVRPNAVVWRTLLGACSLQGDSNGNGNSNIKIXSE 963

Query: 416  A-LQLLHLLNGSSCSPCLITYNTLIDGL-AKKGCMEKAMVLYGQMME 460
            A  QLL L       P  +  N ++  L A KG  +K M++  Q+ +
Sbjct: 964  ARRQLLEL------EPSHVGDNVIMSNLYAAKGMWDKKMLVRNQIKQ 1004


>gi|255574462|ref|XP_002528143.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532441|gb|EEF34234.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 653

 Score =  196 bits (497), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/379 (30%), Positives = 194/379 (51%), Gaps = 2/379 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+++ C  G + +A +L   M  R  +PD +    L+ GL ++DRI++A  +L  M +
Sbjct: 185 NLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQI 244

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P   T+N+++ GLCK+G       L+D M + GC P+ +TYNT++  +   GK  +
Sbjct: 245 EGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 304

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+      +   C P  +TY  +I  + KQ        VL  M   G   +   Y+ LV+
Sbjct: 305 ALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVS 364

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K+GK ++A+ +    + +G + N++ Y+ L+  L      D   KIL  M +   +P
Sbjct: 365 GLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAP 424

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             FT++ L+ G  + G   +AI  +  M   NC  + V Y+ ++  LCK+G + EA+ + 
Sbjct: 425 NAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKVMEAMMVW 484

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM--MENGISPDDITHRTLIWGFC 478
             +  + C P ++ Y+++I GL   G +E+A+ LY +M  +E    PD IT+  L    C
Sbjct: 485 AKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYNILFNALC 544

Query: 479 RADQVEEAVDLLKEIGKRG 497
           +   +  AVDLL  +  RG
Sbjct: 545 KQSSISRAVDLLNSMLDRG 563



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 110/348 (31%), Positives = 187/348 (53%), Gaps = 6/348 (1%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P+V+++N I+++M   G    AI  +++   + C P   TY  L++ +CK   I  A+ +
Sbjct: 179 PNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSL 238

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           LD+M IEGC P   T+N L+N  CK+G +     +++N+  +G  PN +TYNTL+H L  
Sbjct: 239 LDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCL 298

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV- 398
           +G  D    +LD M  +   P   TY  +INGL K G   RA++    +V    +  IV 
Sbjct: 299 KGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQG---RALDGARVLVLMEERGYIVN 355

Query: 399 --TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
              Y+ ++  L KEG   EA++L        C    + Y+ L+DGL +    ++AM +  
Sbjct: 356 EYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILS 415

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M + G +P+  T  +L+ GF       +A+++ K++ K         Y ++IHGLCK  
Sbjct: 416 EMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDG 475

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           KV  A+ V   M+++  +PD   +S++++ + D G  EEA KL+ +++
Sbjct: 476 KVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEML 523



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 207/384 (53%), Gaps = 2/384 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           +P+ +++N+++  +CK G + +AI L  EM V  C PD  TY T++  +    +  +A+ 
Sbjct: 178 LPNVLSFNLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVS 237

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
              +   +GC P   T+ +LI  +CK+    R  +++D+M ++GC P+ VTYN+L++  C
Sbjct: 238 LLDEMQIEGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLC 297

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
            +GK D A+ +++ ++S    PN +TY T+++ L  +G      ++L +M E  +    +
Sbjct: 298 LKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEY 357

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
            Y++L++GL K G  + A+  F + + K C+ + V Y+ ++  LC++   +EA+++L  +
Sbjct: 358 VYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEM 417

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
               C+P   T+++L+ G  + G   KA+ ++  M +   + +++ +  LI G C+  +V
Sbjct: 418 TDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCYSVLIHGLCKDGKV 477

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM--ISSRYKPDDTVFS 541
            EA+ +  ++   G +    AY  +I GLC +  V+ A+++   M  +    +PD   ++
Sbjct: 478 MEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAGSVEEALKLYNEMLCLEPDSQPDVITYN 537

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            +   +        A  L   +++
Sbjct: 538 ILFNALCKQSSISRAVDLLNSMLD 561



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 103/378 (27%), Positives = 182/378 (48%), Gaps = 22/378 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++   C +GKL  A  L+D M     +P+      +I GL++  R    ++VL
Sbjct: 285 NEVTYNTLIHGLCLKGKLDKALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVL 344

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M   G + +   Y+++V GL K G+   A+ L  E    GC+ + + Y+ ++  +  +
Sbjct: 345 VLMEERGYIVNEYVYSVLVSGLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRD 404

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  +A+    +   KGC P   T++ L++   +     +AIEV  DM    C+ + V Y
Sbjct: 405 RKPDEAMKILSEMTDKGCAPNAFTFSSLMKGFFEVGNSHKAIEVWKDMTKINCAENEVCY 464

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN- 354
           + L++  CK GK  +A++V   +L+ G  P+ + Y++++  L   G   +V++ L + N 
Sbjct: 465 SVLIHGLCKDGKVMEAMMVWAKMLATGCRPDVVAYSSMIQGLCDAG---SVEEALKLYNE 521

Query: 355 ----EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
               E    P V TYNIL N LCK   + RA++  N M+ + C PD+VT N  L      
Sbjct: 522 MLCLEPDSQPDVITYNILFNALCKQSSISRAVDLLNSMLDRGCDPDLVTCNIFL------ 575

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
            ML E L      +G+         + L+  L K+     A  +   M++  +SP   T 
Sbjct: 576 RMLREKLDPPQ--DGAK------FLDELVVRLLKRQRNLGASKIVEVMLQKFLSPKASTW 627

Query: 471 RTLIWGFCRADQVEEAVD 488
             ++   C+  +++  +D
Sbjct: 628 ARVVHELCQPKKIQAVID 645



 Score =  139 bits (349), Expect = 6e-30,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 162/328 (49%), Gaps = 39/328 (11%)

Query: 275 RAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL-SRGME--PNSITY 330
           +AIE+   M+ E  C P + ++NS++N   + G +D A+   N+++ ++ M   PN +++
Sbjct: 125 KAIELFYRMSFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSF 184

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           N ++ S+   G  D   ++   M      P  +TY  L++GLCK   +D A++  ++M  
Sbjct: 185 NLIIKSMCKLGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQI 244

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           + C P   T+N ++  LCK+G      +L+  +    C P  +TYNTLI GL  KG ++K
Sbjct: 245 EGCFPSPATFNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 304

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQV--------------------------- 483
           A+ L  +M+ +   P+++T+ T+I G  +  +                            
Sbjct: 305 ALSLLDRMVSSKCVPNEVTYGTIINGLVKQGRALDGARVLVLMEERGYIVNEYVYSVLVS 364

Query: 484 --------EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
                   EEA+ L KE   +G K+    Y  ++ GLC+ +K D A+++L  M      P
Sbjct: 365 GLFKEGKSEEAMRLFKESMDKGCKLNTVLYSALVDGLCRDRKPDEAMKILSEMTDKGCAP 424

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +   FS+++K   + G + +A ++W+ +
Sbjct: 425 NAFTFSSLMKGFFEVGNSHKAIEVWKDM 452



 Score = 92.4 bits (228), Expect = 6e-16,   Method: Compositional matrix adjust.
 Identities = 55/243 (22%), Positives = 128/243 (52%), Gaps = 4/243 (1%)

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           T+ +L+ +      +++++K+L+ M   +   +  ++ ++     K  L ++AI  F +M
Sbjct: 74  TFYSLIENYAYSSDFNSLEKVLNRMRLENRVFSEKSFFVMFKAYGKAHLPNKAIELFYRM 133

Query: 389 VSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS---SCSPCLITYNTLIDGLAK 444
             +  C+P + ++N+VL  + + G  + AL+  + + G+   +  P ++++N +I  + K
Sbjct: 134 SFEFYCKPTVKSFNSVLNVIIQAGFHDRALEFYNHVVGAKDMNILPNVLSFNLIIKSMCK 193

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G ++ A+ L+ +M      PD  T+ TL+ G C+ D+++EAV LL E+   G     + 
Sbjct: 194 LGLVDNAIELFREMPVRKCVPDAYTYCTLMDGLCKVDRIDEAVSLLDEMQIEGCFPSPAT 253

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + ++I+GLCK        ++++ M      P++  ++T++  +   G  ++A  L  +++
Sbjct: 254 FNVLINGLCKKGDFTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKALSLLDRMV 313

Query: 565 EWK 567
             K
Sbjct: 314 SSK 316


>gi|357120470|ref|XP_003561950.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65560-like [Brachypodium distachyon]
          Length = 925

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 126/439 (28%), Positives = 220/439 (50%), Gaps = 5/439 (1%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  G++ DA K+   M ++   P+ +   +LI G  R+ R+  A  +   M   G VP+
Sbjct: 343 LCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQ-RVSRM--AIGLFHRMSRDGVVPN 399

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T+TYN ++  L +  +I SA+ + + M   GC P+  +YN ++R     G  ++A+    
Sbjct: 400 TVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLT 459

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           + L+    P L+TY I+I+  C       AI VL+ M   GC PD  +Y  L++  CK  
Sbjct: 460 NMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKIS 519

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K + A  + N ++ RG+ PN +TY  L+         D   ++L+ M  +   P V TYN
Sbjct: 520 KMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYN 579

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           +LI+GL K      A      M+ +   PD+VTY+TV+  LC  G +  AL++ + +   
Sbjct: 580 VLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKH 639

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
            C P L TY++LI  L ++G +E+A  ++ ++ + G+ PD++T+  +I     + +V+ A
Sbjct: 640 GCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRA 699

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            D L E+   G +     Y ++I GL         + +     +S +  DD + +  V  
Sbjct: 700 FDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTF--DDQIINKDVIS 757

Query: 547 VADDGMTEEAYKLWQKLIE 565
           V    + E  ++L ++L +
Sbjct: 758 VLSSKLAELDFELSRQLYD 776



 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 130/481 (27%), Positives = 219/481 (45%), Gaps = 42/481 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G + DA  +I+ + +    PD     ++I G  R   ++ A ++   M  
Sbjct: 232 NSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDSAFEIFNRMDE 291

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+  TY+ ++ GLC  G++  A+  + EM+  G  P V T+   +  + D G+ + 
Sbjct: 292 EGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIVALCDMGRIED 351

Query: 241 AIGFWKDQLRKGCPPYLITYTILI--EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           A   + D  +KGC P + TYT LI  ++V +      AI +   M+ +G  P+ VTYN+L
Sbjct: 352 AWKIFIDMKKKGCKPNVYTYTSLISGQRVSRM-----AIGLFHRMSRDGVVPNTVTYNAL 406

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   +  + D A++V N +   G  PN+ +YN L+    + G  +    +L  M +   
Sbjct: 407 MNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNMLKGRP 466

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK-------EG 411
           +PT+ TYNI+I G C  G  D AI     M +  CQPD  +Y  ++   CK        G
Sbjct: 467 TPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKMELASG 526

Query: 412 MLNE----------------------------ALQLLHLLNGSSCSPCLITYNTLIDGLA 443
           M NE                            A ++L  +  S C P + TYN LI GL 
Sbjct: 527 MFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVLIHGLT 586

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K+     A  L   M+E  ISPD +T+ T+I G C    +  A+++  ++ K G      
Sbjct: 587 KQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLH 646

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +I  L +  +V+ A ++   +      PD+  +  +++     G  + A+    ++
Sbjct: 647 TYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEM 706

Query: 564 I 564
           I
Sbjct: 707 I 707



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 115/449 (25%), Positives = 218/449 (48%), Gaps = 9/449 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL---QIMV 179
           ++++  ++ ++T A   +D+ ++R           L   LI+++++   S V+     ++
Sbjct: 164 MIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTL---LIQLNKLNMTSTVMDRYHQIL 220

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  P+ + YN ++  LCK G +R A ++++++  SG +PD  TY +++     N    
Sbjct: 221 REGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLD 280

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            A   +     +GC P   TY+ LI  +C    +  A++ + +M   G  P + T+ + +
Sbjct: 281 SAFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPI 340

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C  G+ +DA  +  ++  +G +PN  TY +L+   G R    A+  +   M+     
Sbjct: 341 VALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLIS--GQRVSRMAIG-LFHRMSRDGVV 397

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   TYN L+N L +   +D A+  FN M    C P+  +YN ++   C  G   +A+ +
Sbjct: 398 PNTVTYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSM 457

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +     +P L+TYN +I G    G  + A+ +   M  NG  PD+ ++  LI GFC+
Sbjct: 458 LTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCK 517

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             ++E A  +  E+  RG       Y  +I G CK +K+D A ++LE M  S  +P+   
Sbjct: 518 ISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQT 577

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++ ++  +        A +L + ++E K+
Sbjct: 578 YNVLIHGLTKQNNFSGAEELCKVMLEEKI 606



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 112/460 (24%), Positives = 213/460 (46%), Gaps = 27/460 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N++++ +C+ G    A  ++  M +    P       +I+G       + A +VL++M  
Sbjct: 439 NELIRGYCTIGDTEKAMSMLTNMLKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKA 498

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  PD  +Y  ++ G CK  ++  A  + +EM   G  P+ +TY  ++     + K   
Sbjct: 499 NGCQPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDC 558

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    +   R GC P + TY +LI  + KQ   + A E+   M  E  SPD+VTY++++N
Sbjct: 559 AARMLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVIN 618

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G    A+ + N ++  G  PN  TY++L+ +LG  G  +  +++   + +    P
Sbjct: 619 GLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIP 678

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TY  +I      G VDRA +   +M++  CQP + TY+ ++  L  E + ++ + L 
Sbjct: 679 DEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALP 738

Query: 421 HLLNGSSCSPCLIT----------------------YNTLIDGLAKKGCMEKAMVLYGQM 458
           +  + S+    +I                       Y+ L+  L++ G   +A  LY  M
Sbjct: 739 NAASTSTFDDQIINKDVISVLSSKLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSM 798

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           +     P+  T++  +    RA +V+ A+D+ K +  +  ++  + Y+ +I  LC+  + 
Sbjct: 799 VSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRR 858

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
             A  V E M+S     D+ V++ ++     +G+    YK
Sbjct: 859 KEARFVFEKMLSRALNADEIVWTILI-----NGLLGAGYK 893



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 107/477 (22%), Positives = 208/477 (43%), Gaps = 67/477 (14%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           I++I+       + +A   L +    G      TY  ++  L K     + +    ++  
Sbjct: 162 IHMIKSCSNKAEMTQALNYLDMFSQRGPKMGLFTYTTLLIQLNKLNMTSTVMDRYHQILR 221

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G +P+++ YN+++  +  +G  + A        + G  P   TYT +I   C+   +  
Sbjct: 222 EGLQPNLLIYNSVINALCKDGNVRDAESIINKVFKSGMKPDTFTYTSMILGYCRNRDLDS 281

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A E+ + M  EGC P+  TY++L+N  C  G+ ++A+  I+ +   G+ P   T+   + 
Sbjct: 282 AFEIFNRMDEEGCEPNAATYSTLINGLCNSGRVNEALDFISEMTRHGVLPTVHTFTAPIV 341

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING-------------LCKYGLV---- 378
           +L   G  +   KI   M +    P V+TY  LI+G             + + G+V    
Sbjct: 342 ALCDMGRIEDAWKIFIDMKKKGCKPNVYTYTSLISGQRVSRMAIGLFHRMSRDGVVPNTV 401

Query: 379 ---------------DRAINSFNQMVSKNCQPD--------------------------- 396
                          D A+  FN M    C P+                           
Sbjct: 402 TYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461

Query: 397 --------IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
                   +VTYN ++   C  G  + A+++L L+  + C P   +Y  LI G  K   M
Sbjct: 462 LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKM 521

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E A  ++ +MM+ G+ P+++T+  LI G+C+ ++++ A  +L+ + + G +     Y ++
Sbjct: 522 ELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           IHGL K      A ++ ++M+  +  PD   +ST++  + ++G    A +++ K+++
Sbjct: 582 IHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVK 638



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 113/468 (24%), Positives = 209/468 (44%), Gaps = 22/468 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++       ++  A  + ++M +   +P+      LIRG   I   EKA  +L  M
Sbjct: 402 TYNALMNVLMENMEIDSALIVFNMMGKHGCLPNTSSYNELIRGYCTIGDTEKAMSMLTNM 461

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +     P  +TYN+++ G C  G    AI +L+ M  +GC+PD  +Y  ++       K 
Sbjct: 462 LKGRPTPTLVTYNIIIKGYCDSGDTDVAIRVLELMKANGCQPDEWSYTELISGFCKISKM 521

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A G + + + +G  P  +TYT LI   CK   +  A  +L+ M   GC P++ TYN L
Sbjct: 522 ELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAARMLERMKRSGCRPNVQTYNVL 581

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   KQ  +  A  +   +L   + P+ +TY+T+++ L + G      ++ + M +   
Sbjct: 582 IHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGC 641

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TY+ LI  L + G V+ A   F+++  +   PD VTY  ++      G ++ A  
Sbjct: 642 LPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFD 701

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM----------------------VLYG 456
            L  +  + C P L TY+ LI GL  +    K +                      VL  
Sbjct: 702 FLGEMINAGCQPTLQTYDVLIKGLQNEMVYHKLVALPNAASTSTFDDQIINKDVISVLSS 761

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           ++ E         +  L+    R+ +  EA +L + +  +        Y+  +  L ++ 
Sbjct: 762 KLAELDFELSRQLYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRAL 821

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           KVD+A+ V + M   R +   T +  ++  +      +EA  +++K++
Sbjct: 822 KVDLAMDVFKHMSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKML 869



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 100/434 (23%), Positives = 200/434 (46%), Gaps = 13/434 (2%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + DE +  +++  FC   K+  AS + + M  R   P+      LI G  + ++++ A++
Sbjct: 502 QPDEWSYTELISGFCKISKMELASGMFNEMMDRGLCPNEVTYTALISGYCKDEKLDCAAR 561

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +L+ M  SG  P+  TYN+++ GL K+     A  L   M      PDV+TY+T++  + 
Sbjct: 562 MLERMKRSGCRPNVQTYNVLIHGLTKQNNFSGAEELCKVMLEEKISPDVVTYSTVINGLC 621

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +NG    A+  +   ++ GC P L TY+ LI+ + ++  +  A E+  ++  +G  PD V
Sbjct: 622 NNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAEEMFSELKKQGLIPDEV 681

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY  ++      GK D A   +  +++ G +P   TY+ L+  L +   +    K++ + 
Sbjct: 682 TYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGLQNEMVY---HKLVALP 738

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           N AS S    T++  I       ++   +   +  +S+        Y+ +L  L + G  
Sbjct: 739 NAASTS----TFDDQIINKDVISVLSSKLAELDFELSRQL------YDALLSRLSRSGRW 788

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA  L   +   S  P   TY   +  L +   ++ AM ++  M +         ++ L
Sbjct: 789 FEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKHMSDQRCELHLTGYKEL 848

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I   C+  + +EA  + +++  R        + ++I+GL  +   D+ ++ L +M ++R 
Sbjct: 849 ICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGYKDLCMEFLHIMETNRR 908

Query: 534 KPDDTVFSTIVKKV 547
            P     + + ++ 
Sbjct: 909 NPSSHARTILAREA 922



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 64/318 (20%), Positives = 141/318 (44%), Gaps = 13/318 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T + ++   C+ G +  A ++ + M +   +P+ H   +LI+ L +  R+E+A 
Sbjct: 606 ISPDVVTYSTVINGLCNNGAIPLALEMFNKMVKHGCLPNLHTYSSLIQALGQEGRVEEAE 665

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   +   G +PD +TY  M+      G++  A   L EM  +GC+P + TY+ +++ +
Sbjct: 666 EMFSELKKQGLIPDEVTYVKMIEVCVMSGKVDRAFDFLGEMINAGCQPTLQTYDVLIKGL 725

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            +   + + +            P   + +   +Q+  +  I+     L ++  E      
Sbjct: 726 QNEMVYHKLVAL----------PNAASTSTFDDQIINKDVISVLSSKLAELDFELSRQ-- 773

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y++L++   + G++ +A  +  +++S+   PN  TY   L SL      D    +   
Sbjct: 774 -LYDALLSRLSRSGRWFEANNLYRSMVSQSQCPNQDTYKHFLISLLRALKVDLAMDVFKH 832

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M++      +  Y  LI  LC+      A   F +M+S+    D + +  ++  L   G 
Sbjct: 833 MSDQRCELHLTGYKELICTLCQLHRRKEARFVFEKMLSRALNADEIVWTILINGLLGAGY 892

Query: 413 LNEALQLLHLLNGSSCSP 430
            +  ++ LH++  +  +P
Sbjct: 893 KDLCMEFLHIMETNRRNP 910


>gi|449432854|ref|XP_004134213.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 219/453 (48%), Gaps = 1/453 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    N  +  F   GK+  A K    M     + D     ++I  L + DR+ +A 
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAV 325

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + M  +  VP    YN M+ G    G+   A +LL+     GC P V++YN IL  +
Sbjct: 326 ELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  +A+  + ++++K   P L TY I+I+ +CK   +  A+ V D M   G  P++
Sbjct: 386 GRKGQVDEALKKF-EEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNV 444

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +T N +V+  CK  + DDA  +   L  +   P+++TY +L+  LG  G  D   K+ + 
Sbjct: 445 ITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +A+  P    Y  LI    K G  +     +N+M+   C PD++  NT +  + K G 
Sbjct: 505 MLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +   L   +      P   +Y  LI GL K G   +A  L+  M E G   D   + T
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNT 624

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I GFC++ +V +A  LL+E+  +G++     Y  VI GL K  ++D A  + E   S  
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKG 684

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            + +  ++S+++      G  +EAY + ++L++
Sbjct: 685 IELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 717



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 201/411 (48%), Gaps = 6/411 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   +L DA  + + +  +   PD     +LI GL R  R+++A K+ + M
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +  +P+ + Y  ++    K G+      + +EM   GC PD++  NT +  +F  G+ 
Sbjct: 506 LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEI 565

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++    +++    G  P   +YTILI  + K      A E+   M  +GC  D   YN++
Sbjct: 566 EKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTV 625

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK + A  ++  + ++G EP  +TY +++  L      D +D+   +  EA  
Sbjct: 626 IDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK---IDRLDEAYMLFEEAKS 682

Query: 359 SP---TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 V  Y+ LI+G  K G +D A     +++ K   P++ T+N +L AL K   ++E
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL     +    C+P  ITY+ LI GL K     KA V + +M + G  P+  T+ T+I 
Sbjct: 743 ALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMIS 802

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           G  +A  + EA  L ++  ++G    ++ Y  +I GL  + +   A ++ E
Sbjct: 803 GLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFE 853



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 223/480 (46%), Gaps = 36/480 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +   GK  DA  L++   R+  IP       ++  L R  ++++A K  + M  
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-K 402

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
              +P+  TYN+M+  LCK G++ +A+ + D M  +G  P+VIT N ++  +    +   
Sbjct: 403 KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDD 462

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   ++    K C P  +TY  LIE + +   +  A ++ + M      P+ V Y SL+ 
Sbjct: 463 ACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIR 522

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G+ +D   + N +L  G  P+ +  NT +  +   G  +    +   +      P
Sbjct: 523 NFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              +Y ILI+GL K G    A   F  M  + C  D   YNTV+   CK G +N+A QLL
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 642

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++TY ++IDGLAK   +++A +L+ +    GI  + + + +LI GF + 
Sbjct: 643 EEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKV 702

Query: 481 DQVEEAVDLLKEIGKRG----------------------------NKMRN-------SAY 505
            +++EA  +++E+ ++G                              M++         Y
Sbjct: 703 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITY 762

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++IHGLCK +K + A    + M    +KP+   ++T++  +A  G   EA  L++K  E
Sbjct: 763 SILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKE 822



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 192/406 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +++     G++ +A KL + M   NQIP+     +LIR   +  R E   K+ 
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIY 537

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PD +  N  +  + K G+I    AL  E+   G  PD  +Y  ++  +   
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKA 597

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   +     +GC      Y  +I+  CK   + +A ++L++M  +G  P +VTY
Sbjct: 598 GFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTY 657

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            S+++   K  + D+A ++     S+G+E N + Y++L+   G  G  D    I++ + +
Sbjct: 658 GSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 717

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P V+T+N L++ L K   +  A+  F  M    C P+ +TY+ ++  LCK    N+
Sbjct: 718 KGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNK 777

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A      +      P + TY T+I GLAK G + +A  L+ +  E G   D   +  +I 
Sbjct: 778 AFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIE 837

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G   A++  +A  L +E   +G  +      +++  L K++ ++ A
Sbjct: 838 GLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 220/476 (46%), Gaps = 12/476 (2%)

Query: 87  VNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARR 146
           V++ L+     KK   P+L             T N ++   C  GKL  A  + D M   
Sbjct: 391 VDEALKKFEEMKKDAIPNLS------------TYNIMIDMLCKAGKLETALVVRDAMKDA 438

Query: 147 NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
              P+      ++  L +  R++ A  + + +      PD +TY  ++ GL + G++  A
Sbjct: 439 GLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEA 498

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
             L ++M  +   P+ + Y +++R  F  G+ +     + + LR GC P L+     ++ 
Sbjct: 499 YKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDC 558

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           V K   I +   +  ++   G  PD  +Y  L++   K G   +A  +   +  +G   +
Sbjct: 559 VFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLD 618

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           +  YNT++      G  +   ++L+ M    H PTV TY  +I+GL K   +D A   F 
Sbjct: 619 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFE 678

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +  SK  + ++V Y++++    K G ++EA  ++  L     +P + T+N L+D L K  
Sbjct: 679 EAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 738

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            + +A+V +  M +   +P+ IT+  LI G C+  +  +A    +E+ K+G K     Y 
Sbjct: 739 EISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYT 798

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            +I GL K+  +  A  + E         D  +++ I++ +++     +AY+L+++
Sbjct: 799 TMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 107/484 (22%), Positives = 198/484 (40%), Gaps = 71/484 (14%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P  + CI ++   I+  ++ +A   +Q M      P    Y  ++G L         + L
Sbjct: 163 PSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTL 222

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
             +M   G   +V  + T++R     G+   A+    +       P ++ Y + I+   K
Sbjct: 223 FQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGK 282

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK------------------------- 304
              +  A +   +M   G   D VTY S++   CK                         
Sbjct: 283 AGKVDMAWKFFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYA 342

Query: 305 ----------QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
                      GK++DA  ++     +G  P+ ++YN +L  LG +G  D   K  + M 
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK 402

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           + +  P + TYNI+I+ LCK G ++ A+   + M      P+++T N ++  LCK   L+
Sbjct: 403 KDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A  +   L+  +C P  +TY +LI+GL + G +++A  LY QM++    P+ + + +LI
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 475 WGF-----------------------------------CRADQVEEAVDLLKEIGKRGNK 499
             F                                    +A ++E+   L +EI   G  
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
               +Y ++IHGL K+     A ++   M       D   ++T++      G   +AY+L
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 560 WQKL 563
            +++
Sbjct: 642 LEEM 645



 Score =  136 bits (342), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 152/332 (45%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G++     L   +     IPD      LI GL++     +A ++   M   G V DT  Y
Sbjct: 563 GEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N ++ G CK G++  A  LL+EM   G EP V+TY +++  +    +  +A   +++   
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           KG    ++ Y+ LI+   K   I  A  +++++  +G +P++ T+N L++   K  +  +
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A++   ++      PN ITY+ L+H L     ++        M +    P VFTY  +I+
Sbjct: 743 ALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMIS 802

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GL K G +  A   F +   K    D   YN ++  L      ++A +L        CS 
Sbjct: 803 GLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSI 862

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
              T   L+D L K  C+E+A ++   + E  
Sbjct: 863 YTKTCVVLLDSLHKAECIEQAAIVGAVLRETA 894



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 91/411 (22%), Positives = 186/411 (45%), Gaps = 36/411 (8%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
            YN ++  + +  +      +L+EMS++G  P   T   I+ +   + K ++A  F +  
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 249 LRKGCPPYLITY-----------------------------------TILIEQVCKQCGI 273
            +    P    Y                                   T LI    ++  +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A+ +LD+M      PD+V YN  ++   K GK D A    + + + G+  + +TY ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKFFHEMKANGLVLDDVTYTSM 311

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L      +   ++ + M++    P  + YN +I G    G  + A +   +   K C
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P +V+YN +L  L ++G ++EAL+    +   +  P L TYN +ID L K G +E A+V
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +   M + G+ P+ IT   ++   C+A ++++A  + + +  +  +     Y  +I GL 
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +  +VD A ++ E M+ +   P+  V++++++     G  E+ +K++ +++
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541



 Score = 41.2 bits (95), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 429 SPCLITYNTLIDGLA---KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
           + C   YN+L+  +A   K  C+E+ +    +M   G  P + T   ++  F ++ ++ E
Sbjct: 127 AHCREAYNSLLMVMARTRKFNCLEQIL---EEMSIAGFGPSNNTCIEIVLSFIKSRKLRE 183

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A   ++ + K   +   SAY  +I  L  S+  D  + + + M    Y  +  +F+T+++
Sbjct: 184 AFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIR 243

Query: 546 KVADDGMTEEAYKLWQKL 563
             A +G  + A  L  ++
Sbjct: 244 VFAREGRVDAALSLLDEM 261


>gi|302766715|ref|XP_002966778.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
 gi|300166198|gb|EFJ32805.1| hypothetical protein SELMODRAFT_62477 [Selaginella moellendorffii]
          Length = 480

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 199/398 (50%), Gaps = 3/398 (0%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           +  A  +++ M      PD      LIRG  +    ++    L  M+ +G  P+ I YN 
Sbjct: 10  VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNN 69

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++  LCK G +  A + L  M    C P+V++YN I+         ++A+ F ++    G
Sbjct: 70  LISCLCKAGMLAEAESYLKRMP-QHCAPNVVSYNIIIDGYCKARNIEKALAFLREMEELG 128

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
            PP    Y+ +++  CK   +++A++V  +M  +GC PDIV +N L++   +  K  +A 
Sbjct: 129 HPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEAR 188

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            +  ++ SRG +P+ +TYNT++  L      D    +L+ M +   SPT  TY  LI+ L
Sbjct: 189 ELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHL 248

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNT--VLGALCKEGMLNEALQLLHLLNGSSCSP 430
           CK+  + +A   F +M    C      Y+   ++  LCK     EA ++   + G   SP
Sbjct: 249 CKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISP 308

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            ++TYNTL++GL     ++ AM L   M++   +P+  T+  LI   C+ DQVEEA  LL
Sbjct: 309 TVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLL 368

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
             +  +G       + +++  L ++ ++D A ++ + M
Sbjct: 369 SAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 406



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 120/451 (26%), Positives = 210/451 (46%), Gaps = 3/451 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +++  +++ F   G        +D M      P+     NLI  L +   + +A   L
Sbjct: 28  DVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGLFPNAILYNNLISCLCKAGMLAEAESYL 87

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      P+ ++YN+++ G CK   I  A+A L EM   G  P    Y++I+++    
Sbjct: 88  KRMPQHCA-PNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKT 146

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+  + +   KGC P ++ + +L+  + +   I  A E+   M   GC PD+VTY
Sbjct: 147 GNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTY 206

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++   CK  K D+AV ++  +    + P  +TY TL+  L          ++ + M E
Sbjct: 207 NTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAE 266

Query: 356 ASHSPTVFTYN--ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                T   Y+  ILINGLCK      A   F +M  +   P +VTYNT+L  L     L
Sbjct: 267 GPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVTYNTLLEGLLSTAKL 326

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +A++L + +     +P + TY  LI  L K   +E+A  L   M + G  P       L
Sbjct: 327 QDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMRDKGFVPSLKIWEVL 386

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           +    RA ++++A +L KE+ +   +    +  +++ G+ +   VD A   L+ M  +  
Sbjct: 387 LSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVDEAKDFLKQMTDTGI 446

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            PD   +  +V  +   G  ++A KL ++L+
Sbjct: 447 VPDKFTYDKLVVGLCWQGKADQARKLVEELV 477



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/407 (26%), Positives = 204/407 (50%), Gaps = 3/407 (0%)

Query: 159 IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
           IR L+  D + +A  +++ M  +G  PD  ++ +++ G  K G  +   + LD M  +G 
Sbjct: 1   IRKLVEADLVAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSFQRGCSQLDRMLEAGL 60

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
            P+ I YN ++  +   G   +A  + K ++ + C P +++Y I+I+  CK   I +A+ 
Sbjct: 61  FPNAILYNNLISCLCKAGMLAEAESYLK-RMPQHCAPNVVSYNIIIDGYCKARNIEKALA 119

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
            L +M   G  P    Y+S+V   CK G    A+ V   + ++G EP+ + +N LL  L 
Sbjct: 120 FLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLW 179

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
                    ++   MN     P V TYN +I GLCK+  +D A+    +M  ++  P  V
Sbjct: 180 RARKIHEARELFRSMNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFV 239

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT--LIDGLAKKGCMEKAMVLYG 456
           TY T++  LCK   L +A ++   +    C      Y+   LI+GL K     +A  ++ 
Sbjct: 240 TYTTLIDHLCKFARLQQAYEVFEKMAEGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQ 299

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M   GISP  +T+ TL+ G     ++++A++L   +  +        Y ++I  LCK+ 
Sbjct: 300 EMRGRGISPTVVTYNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTD 359

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +V+ A ++L  M    + P   ++  ++ ++A  G  ++A++L++++
Sbjct: 360 QVEEAFKLLSAMRDKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEM 406



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 112/408 (27%), Positives = 197/408 (48%), Gaps = 8/408 (1%)

Query: 93  GLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF 152
           G+    +S+   +P    P V     + N I+  +C    +  A   +  M      P  
Sbjct: 78  GMLAEAESYLKRMPQHCAPNV----VSYNIIIDGYCKARNIEKALAFLREMEELGHPPTP 133

Query: 153 HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
           H   ++++   +   + KA  V   M   G  PD + +N+++ GL +  +I  A  L   
Sbjct: 134 HAYSSIVQSFCKTGNVSKAMDVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRS 193

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           M+  GC+PDV+TYNT++  +    K  +A+   +   ++   P  +TYT LI+ +CK   
Sbjct: 194 MNSRGCKPDVVTYNTMIAGLCKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFAR 253

Query: 273 IARAIEVLDDMAIEG---CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
           + +A EV + MA EG   C+    +   L+N  CK  +  +A  +   +  RG+ P  +T
Sbjct: 254 LQQAYEVFEKMA-EGPCPCTEPAYSVLILINGLCKARRPGEAKEMFQEMRGRGISPTVVT 312

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YNTLL  L S        ++   M +   +P +FTY ILI+ LCK   V+ A    + M 
Sbjct: 313 YNTLLEGLLSTAKLQDAMELTYFMLDQVPAPNMFTYEILISSLCKTDQVEEAFKLLSAMR 372

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            K   P +  +  +L  L + G L++A +L   ++  +C   + + N L+DG+ ++G ++
Sbjct: 373 DKGFVPSLKIWEVLLSRLARAGRLDDAFELYKEMSRINCQQLVGSSNILLDGILRRGSVD 432

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +A     QM + GI PD  T+  L+ G C   + ++A  L++E+ + G
Sbjct: 433 EAKDFLKQMTDTGIVPDKFTYDKLVVGLCWQGKADQARKLVEELVRDG 480



 Score =  126 bits (316), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 79/293 (26%), Positives = 137/293 (46%), Gaps = 36/293 (12%)

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           +A+A  ++++M   G SPD+ ++  L+    K G +                        
Sbjct: 10  VAQAEAIVEEMKYAGFSPDVQSHCLLIRGFFKSGSF------------------------ 45

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
                  RGC       LD M EA   P    YN LI+ LCK G++  A  S+ + + ++
Sbjct: 46  ------QRGCSQ-----LDRMLEAGLFPNAILYNNLISCLCKAGMLAEA-ESYLKRMPQH 93

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C P++V+YN ++   CK   + +AL  L  +      P    Y++++    K G + KAM
Sbjct: 94  CAPNVVSYNIIIDGYCKARNIEKALAFLREMEELGHPPTPHAYSSIVQSFCKTGNVSKAM 153

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            ++ +M   G  PD +    L+ G  RA ++ EA +L + +  RG K     Y  +I GL
Sbjct: 154 DVFAEMPAKGCEPDIVNFNVLLSGLWRARKIHEARELFRSMNSRGCKPDVVTYNTMIAGL 213

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           CK KK+D A+ +LE M      P    ++T++  +      ++AY++++K+ E
Sbjct: 214 CKWKKLDEAVFLLERMKQEDVSPTFVTYTTLIDHLCKFARLQQAYEVFEKMAE 266


>gi|18424537|ref|NP_568948.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75170898|sp|Q9FIT7.1|PP442_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g61990, mitochondrial; Flags: Precursor
 gi|10176917|dbj|BAB10161.1| unnamed protein product [Arabidopsis thaliana]
 gi|332010163|gb|AED97546.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 974

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 218/473 (46%), Gaps = 40/473 (8%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
            G +  A  L D M     IP      +LI G  R   + +  ++L  M     V    T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y  +V G+C  G +  A  ++ EM  SGC P+V+ Y T+++T   N +F  A+   K+  
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS------------ 297
            +G  P +  Y  LI  + K   +  A   L +M   G  P+  TY +            
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539

Query: 298 -----------------------LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
                                  L+N  CK+GK  +A     +++ +G+  ++ TY  L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           + L      D  ++I   M     +P VF+Y +LING  K G + +A + F++MV +   
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+++ YN +LG  C+ G + +A +LL  ++     P  +TY T+IDG  K G + +A  L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M   G+ PD   + TL+ G CR + VE A+ +     K+G     + +  +I+ + K
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFK 778

Query: 515 SKKVDMAIQVLELMISSRY----KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             K ++  +VL  ++   +    KP+D  ++ ++  +  +G  E A +L+ ++
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 178/372 (47%), Gaps = 10/372 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D KT   ++       K+ DA ++   M  +   PD      LI G  ++  ++KAS + 
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  P+ I YNM++GG C+ G+I  A  LLDEMSV G  P+ +TY TI+     +
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   + +   KG  P    YT L++  C+   + RAI +      +GC+     +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPF 769

Query: 296 NSLVNFSCKQGKYDDAVLVINNLL----SRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           N+L+N+  K GK +    V+N L+     R  +PN +TYN ++  L   G  +A  ++  
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M  A+  PTV TY  L+NG  K G        F++ ++   +PD + Y+ ++ A  KEG
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889

Query: 412 MLNEALQLLHLLNGSS-----CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           M  +AL L+  +   +     C   + T   L+ G AK G ME A  +   M+     PD
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949

Query: 467 DITHRTLIWGFC 478
             T   LI   C
Sbjct: 950 SATVIELINESC 961



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 217/441 (49%), Gaps = 22/441 (4%)

Query: 113 VENDEKTN----NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           VEN  K N       +  +    +   A K +  M     +P+   C  LI    +  ++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A    + MV  G + D  TY +++ GL K  ++  A  +  EM   G  PDV +Y  +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G  ++A   + + + +G  P +I Y +L+   C+   I +A E+LD+M+++G 
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC--WDAV 346
            P+ VTY ++++  CK G   +A  + + +  +G+ P+S  Y TL+      GC   + V
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD-----GCCRLNDV 748

Query: 347 DKILDIM--NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC----QPDIVTY 400
           ++ + I   N+   + +   +N LIN + K+G  +      N+++  +     +P+ VTY
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N ++  LCKEG L  A +L H +  ++  P +ITY +L++G  K G   +   ++ + + 
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR-----GNKMRNSAYRLVIHGLCKS 515
            GI PD I +  +I  F +     +A+ L+ ++  +     G K+  S  R ++ G  K 
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928

Query: 516 KKVDMAIQVLELMISSRYKPD 536
            ++++A +V+E M+  +Y PD
Sbjct: 929 GEMEVAEKVMENMVRLQYIPD 949



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 210/496 (42%), Gaps = 40/496 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++  CS G L  A  ++  M      P+      LI+  ++  R   A +VL+ M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD   YN ++ GL K  ++  A + L EM  +G +P+  TY   +    +  +F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  + K+    G  P  +  T LI + CK+  +  A      M  +G   D  TY  L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   K  K DDA  +   +  +G+ P+  +Y  L++     G       I D M E   
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V  YN+L+ G C+ G +++A    ++M  K   P+ VTY T++   CK G L EA +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG---------------------- 456
           L   +      P    Y TL+DG  +   +E+A+ ++G                      
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFK 778

Query: 457 ------------QMMENGI----SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
                       ++M+        P+D+T+  +I   C+   +E A +L  ++ +  N M
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM-QNANLM 837

Query: 501 RNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +++G  K  +      V +  I++  +PD  ++S I+     +GMT +A  L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897

Query: 560 WQKLIEWKVFEKGTTL 575
             ++      + G  L
Sbjct: 898 VDQMFAKNAVDDGCKL 913



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 102/499 (20%), Positives = 210/499 (42%), Gaps = 56/499 (11%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +   + ++G + +A  +         +P    C  L+  L+R +R++    V + MV   
Sbjct: 157 LFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216

Query: 183 GVPDTITYNMMVGGLCKRGQIR---------------------SAIALLDEMSVSGCEPD 221
            V D  TY+M++   C+ G ++                      A+ L + M   G  P 
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
             TY+ ++  +    + + A     +    G      TY++LI+ + K      A  ++ 
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +M   G +     Y+  +    K+G  + A  + + +++ G+ P +  Y +L+       
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
                 ++L  M + +   + +TY  ++ G+C  G +D A N   +M++  C+P++V Y 
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           T++    +     +A+++L  +     +P +  YN+LI GL+K   M++A     +M+EN
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516

Query: 462 GISPDDITHRTLIWGFCRADQVEEA-------------------VDLLKEIGKRGNKMRN 502
           G+ P+  T+   I G+  A +   A                     L+ E  K+G  +  
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEA 576

Query: 503 -SAYR---------------LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            SAYR               ++++GL K+ KVD A ++   M      PD   +  ++  
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636

Query: 547 VADDGMTEEAYKLWQKLIE 565
            +  G  ++A  ++ +++E
Sbjct: 637 FSKLGNMQKASSIFDEMVE 655



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 5/162 (3%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F + ++ T N ++   C  G L  A +L   M   N +P      +L+ G  ++ R  + 
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-----GCEPDVITYN 226
             V    + +G  PD I Y++++    K G    A+ L+D+M        GC+  + T  
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
            +L      G+ + A    ++ +R    P   T   LI + C
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 43.9 bits (102), Expect = 0.26,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 40/221 (18%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKN------------CQPDIV-------TYNTVL 404
           +++ L   LC +G  ++A++   +M+ +N            C  + V        +  + 
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
                +G + EA+ +     G    P L     L+D L +   ++    +Y  M+E  + 
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN----------KMRNS----------- 503
            D  T+  LI   CRA  V+   D+L +  K             K++ S           
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY 278

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            Y ++I GLCK K+++ A  +L  M S     D+  +S ++
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319


>gi|225433712|ref|XP_002266503.1| PREDICTED: pentatricopeptide repeat-containing protein At1g02060,
           chloroplastic-like [Vitis vinifera]
          Length = 746

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 123/426 (28%), Positives = 210/426 (49%), Gaps = 12/426 (2%)

Query: 154 FCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
           F  +LIR        +++ KV + M   G  P  +T+N ++  + KRG+   A  L DEM
Sbjct: 167 FFNSLIRSYGWAGLFQESIKVFKTMKEIGVSPSVVTFNSLLSIVLKRGRTSMAKQLFDEM 226

Query: 214 -SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
               G  PD  T+N ++R    N    +   F+K+  R  C P ++TY  L++ +C+   
Sbjct: 227 LDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKEMSRFKCDPDVVTYNTLVDGLCRAGK 286

Query: 273 IARAIEVLDDMAIEG--CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           +  A  V+  M  +    SP++VTY +L+   C +    +A+ ++  ++SRG++PN ITY
Sbjct: 287 VKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITY 346

Query: 331 NTLLHSLGSRGCWDAVDKILD-IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           NTL+  L      D + +IL+ ++ +    P   T N LI   C  G ++ A + F +M 
Sbjct: 347 NTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMS 406

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLH-------LLNGSSCSPCLITYNTLIDGL 442
               QPD  TY+ ++ +LC+ G    A +          LL+   C P +  YN + + L
Sbjct: 407 ELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYL 466

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
              G  +KA  ++ Q+M+ G + D  +++TLI G CR    E   DLL  + +R      
Sbjct: 467 CSNGKTKKAERVFRQLMKRG-TQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDA 525

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y L+I GL K     +A + LE M+ S + P   +F +I+  + + G   E+  L + 
Sbjct: 526 ETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKL 585

Query: 563 LIEWKV 568
           ++E ++
Sbjct: 586 MLERRI 591



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/490 (24%), Positives = 215/490 (43%), Gaps = 44/490 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N +L     RG+ + A +L D M     + PD +    LIRG      +++     + 
Sbjct: 202 TFNSLLSIVLKRGRTSMAKQLFDEMLDTYGVTPDTYTFNILIRGFCMNSMVDEGFWFFKE 261

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM--SVSGCEPDVITYNTILRTMFDN 235
           M      PD +TYN +V GLC+ G+++ A  ++  M        P+V+TY T++R     
Sbjct: 262 MSRFKCDPDVVTYNTLVDGLCRAGKVKIAHNVVKGMVKKSPNLSPNVVTYTTLIRGYCMK 321

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVT 294
               +A+    + + +G  P  ITY  LI+ +C+   + +  E+L+ M  +G   PD  T
Sbjct: 322 QDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCT 381

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD--- 351
            N+L+   C  GK ++A  V   +    ++P+S TY+ L+ SL  RG +   ++  D   
Sbjct: 382 LNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELA 441

Query: 352 ----IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
               ++++    P V  YN +   LC  G   +A   F Q++ +  Q D  +Y T++   
Sbjct: 442 EKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRGTQ-DPPSYKTLILGH 500

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C+EG       LL L+      P   TY  +IDGL KKG    A     +M+++   P  
Sbjct: 501 CREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTT 560

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKR-----------------GNKMRNSAYRLV-- 508
               +++          E+  L+K + +R                  + +++ A+  +  
Sbjct: 561 AIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGL 620

Query: 509 -------------IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
                        +  LC+S+K+  A ++L   +  R   D  + ST++  +       E
Sbjct: 621 LYENGYLVKMEELVSFLCQSRKLLEAQKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSE 680

Query: 556 AYKLWQKLIE 565
           A+ L+ +L+E
Sbjct: 681 AFALYYELVE 690



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 98/395 (24%), Positives = 187/395 (47%), Gaps = 20/395 (5%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++ +C +  + +A  L+  M  R   P+      LI+GL    +++K  ++L+ M
Sbjct: 310 TYTTLIRGYCMKQDMAEALSLLAEMVSRGLKPNKITYNTLIQGLCEAQKLDKIKEILEGM 369

Query: 179 VMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           V  GG +PDT T N ++   C  G++  A ++ ++MS    +PD  TY+ ++R++   G 
Sbjct: 370 VGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEKMSELRVQPDSATYSVLVRSLCQRGD 429

Query: 238 FKQAIGFWKDQLRK-------GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
           F++A  F+ +   K       GC P +  Y  + E +C      +A  V   +   G + 
Sbjct: 430 FRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFEYLCSNGKTKKAERVFRQLMKRG-TQ 488

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D  +Y +L+   C++G  +    ++  +L R   P++ TY  ++  L  +G      K L
Sbjct: 489 DPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPDAETYGLMIDGLLKKGDPVLAHKSL 548

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           + M ++SH PT   ++ ++  L + G    + +    M+ +  + +I      +  L K 
Sbjct: 549 EKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVKLMLERRIRQNIDLSTHTVRLLYKS 608

Query: 411 GMLNEALQLLHLL--NGSSCSPCLITYNTLIDGL--AKKGCMEKAMVLYGQMMENGISPD 466
           G+ ++A   + LL  NG      L+    L+  L  ++K    + M+L+   +E   S D
Sbjct: 609 GLQDKAFMTIGLLYENGY-----LVKMEELVSFLCQSRKLLEAQKMLLFS--LEKRQSVD 661

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
                T+I G C+A +V EA  L  E+ ++G + R
Sbjct: 662 IDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHR 696



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 147/373 (39%), Gaps = 76/373 (20%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N ++Q  C   KL    ++++ M      IPD      LI+    + ++E+A  V + 
Sbjct: 345 TYNTLIQGLCEAQKLDKIKEILEGMVGDGGFIPDTCTLNTLIKAHCTMGKLEEAFSVFEK 404

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-------GCEPDVITYNTILR 230
           M      PD+ TY+++V  LC+RG  R A    DE++         GC+P V  YN +  
Sbjct: 405 MSELRVQPDSATYSVLVRSLCQRGDFRRAEEFFDELAEKEILLHDVGCKPLVAAYNPMFE 464

Query: 231 TMFDNGKFKQAIGFWKDQLRKGC--PP---YLI--------------------------- 258
            +  NGK K+A   ++  +++G   PP    LI                           
Sbjct: 465 YLCSNGKTKKAERVFRQLMKRGTQDPPSYKTLILGHCREGTPEAGFDLLVLMLRRDFVPD 524

Query: 259 --TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
             TY ++I+ + K+     A + L+ M      P    ++S++    ++G   ++  ++ 
Sbjct: 525 AETYGLMIDGLLKKGDPVLAHKSLEKMLKSSHLPTTAIFHSILAALVEKGCAHESASLVK 584

Query: 317 NLLSR-------------------GMEPNSITYNTLLHSLG--------------SRGCW 343
            +L R                   G++  +     LL+  G              SR   
Sbjct: 585 LMLERRIRQNIDLSTHTVRLLYKSGLQDKAFMTIGLLYENGYLVKMEELVSFLCQSRKLL 644

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           +A  K+L    E   S  +   + +I+GLCK   V  A   + ++V K  Q  +     +
Sbjct: 645 EA-QKMLLFSLEKRQSVDIDMCSTVISGLCKAHKVSEAFALYYELVEKGMQHRLTCQEDL 703

Query: 404 LGALCKEGMLNEA 416
             +L  EG LNEA
Sbjct: 704 RISLEAEGRLNEA 716


>gi|302758166|ref|XP_002962506.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
 gi|300169367|gb|EFJ35969.1| hypothetical protein SELMODRAFT_450632 [Selaginella moellendorffii]
          Length = 807

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 121/484 (25%), Positives = 228/484 (47%), Gaps = 34/484 (7%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + D  T N ++   C   ++  A +L++ M   + +PD      LI GL R  R+ +A  
Sbjct: 289 QGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGLCRAKRLSEARD 348

Query: 174 VLQIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +L  +       P+ ++YN ++ G  K  ++  A  L  EM  +G  PDV+TY+T++R +
Sbjct: 349 LLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQHPDVVTYSTLIRGL 408

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            + G+  +A  + ++ + K   P +  Y+ +I  +C+   +  A  V D M   GC P++
Sbjct: 409 CNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVFDSMVANGCQPNL 468

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--------------- 337
             YNSL+   CK G+  DA L +  +  RG  P+ +TY TL+  L               
Sbjct: 469 AVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRWSRTDEACDLYVR 528

Query: 338 -----------------GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
                             S  C +   ++L ++    +SPT F Y  +I  LCK   +  
Sbjct: 529 SLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYATVIESLCKENNLAE 588

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A      M+    +PD  T + ++GA+C++     A+  L  +      P + TY+TL++
Sbjct: 589 ARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRLGSKPSVGTYSTLLN 648

Query: 441 GLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
            L K G   +A V+  +++ +    PD++ +  LI  +   DQVEEA ++L+E+  +   
Sbjct: 649 ALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVEEARNVLQELKSKWGI 708

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
               AY  ++ GL +++ + M  ++L  M  + +  ++  F+ +++     G T+ A ++
Sbjct: 709 QSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILIQGFCRLGQTDRAVRV 768

Query: 560 WQKL 563
             ++
Sbjct: 769 LSEM 772



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/457 (29%), Positives = 224/457 (49%), Gaps = 14/457 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L   C  G L  A +  + M+    IP       LI GL R  R+++A    + M  + 
Sbjct: 166 LLNALCKSGNLELALRYFEKMS---SIPCAATWTILIDGLFRAIRVDEACYYFEEMKHTA 222

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +P+  TY +++ GL K G++  A  +L EM V    P +  Y +++      G   +A 
Sbjct: 223 -IPNNWTYTVVINGLVKAGKVAEAERVLQEMPV----PTLANYTSVIGGHCKAGDMGKAY 277

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +D  RKG     +TY  LI   C+   I RA E+L++M      PDI TY+ L+   
Sbjct: 278 HLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILIAGL 337

Query: 303 CKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSP 360
           C+  +  +A  ++  L +     PN ++YNTL+          DA    L+++    H P
Sbjct: 338 CRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQH-P 396

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY+ LI GLC  G    A +   +MV K   P +  Y++V+  LC+ G L+ A  + 
Sbjct: 397 DVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVF 456

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  + C P L  YN+LI GL K G +  A +   +M E G SPD +T+ TLI G CR 
Sbjct: 457 DSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRW 516

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            + +EA DL     ++G ++  ++  +VI  L   + ++ A +VL +++++   P    +
Sbjct: 517 SRTDEACDLYVRSLEQGIEISETSCNVVIASL---RCLEQAQRVLRVVLATGNSPTAFFY 573

Query: 541 STIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           +T+++ +  +    EA +L + +I   +   G+T+ A
Sbjct: 574 ATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDA 610



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/453 (27%), Positives = 218/453 (48%), Gaps = 37/453 (8%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
           +   IP+      +I GL++  ++ +A +VLQ M     VP    Y  ++GG CK G + 
Sbjct: 219 KHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEM----PVPTLANYTSVIGGHCKAGDMG 274

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
            A  LL++M   G + D +TYNT++       +  +A    ++       P + TY ILI
Sbjct: 275 KAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFTYDILI 334

Query: 265 EQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
             +C+   ++ A ++L  +  E  C+P++V+YN+L++   K  + +DA  +   +++ G 
Sbjct: 335 AGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEMVTAGQ 394

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ +TY+TL+  L + G        L+ M      P V  Y+ +I+GLC+ G +D A  
Sbjct: 395 HPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAAST 454

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F+ MV+  CQP++  YN+++  LCK G L +A   +  +    CSP  +TY TLI GL 
Sbjct: 455 VFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLC 514

Query: 444 KKGCMEKAMVLYGQMMENGI--------------------------------SPDDITHR 471
           +    ++A  LY + +E GI                                SP    + 
Sbjct: 515 RWSRTDEACDLYVRSLEQGIEISETSCNVVIASLRCLEQAQRVLRVVLATGNSPTAFFYA 574

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           T+I   C+ + + EA  LL+++   G K   S    ++  +C+  K  +A+  LE M+  
Sbjct: 575 TVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVRL 634

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             KP    +ST++  +   G   EA+ + ++LI
Sbjct: 635 GSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLI 667



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 118/449 (26%), Positives = 218/449 (48%), Gaps = 11/449 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N   +     G+  +A +L      +  IPD      LIRGL    +++ A  + + M
Sbjct: 92  TYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYEEM 151

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P  +T   ++  LCK G +  A+   ++MS   C     T+  ++  +F   + 
Sbjct: 152 VDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPC---AATWTILIDGLFRAIRV 208

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A  ++ ++++    P   TYT++I  + K   +A A  VL +M +    P +  Y S+
Sbjct: 209 DEAC-YYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPV----PTLANYTSV 263

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK G    A  ++ ++  +G + +++TYNTL+H        D   ++L+ M     
Sbjct: 264 IGGHCKAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDF 323

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQPDIVTYNTVLGALCKEGMLNEAL 417
            P +FTY+ILI GLC+   +  A +    + +++ C P++V+YNT++    K   +N+A 
Sbjct: 324 VPDIFTYDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAY 383

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           QL   +  +   P ++TY+TLI GL   G   +A     +M+   I P    + ++I G 
Sbjct: 384 QLFLEMVTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGL 443

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV-DMAIQVLELMISSRYKPD 536
           CRA +++ A  +   +   G +   + Y  +I+GLCK+ ++ D  ++V E M      PD
Sbjct: 444 CRAGELDAASTVFDSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKE-MTERGCSPD 502

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              + T++  +     T+EA  L+ + +E
Sbjct: 503 GVTYGTLIVGLCRWSRTDEACDLYVRSLE 531



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 98/381 (25%), Positives = 182/381 (47%), Gaps = 4/381 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + +++  C+ G+ ++A   ++ M  +  +P      ++I GL R   ++ AS V 
Sbjct: 397 DVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGELDAASTVF 456

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV +G  P+   YN ++ GLCK G++  A   + EM+  GC PD +TY T++  +   
Sbjct: 457 DSMVANGCQPNLAVYNSLIYGLCKTGRLCDAKLRVKEMTERGCSPDGVTYGTLIVGLCRW 516

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A   +   L +G      +  ++I  +  +C + +A  VL  +   G SP    Y
Sbjct: 517 SRTDEACDLYVRSLEQGIEISETSCNVVIASL--RC-LEQAQRVLRVVLATGNSPTAFFY 573

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +++   CK+    +A  ++ +++  G++P+  T + L+ ++  +         L+ M  
Sbjct: 574 ATVIESLCKENNLAEARQLLEDMIGAGIKPDGSTVDALVGAMCRQDKAVVAMAFLEEMVR 633

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLN 414
               P+V TY+ L+N L K G    A     +++S  +C PD + Y  ++ A   +  + 
Sbjct: 634 LGSKPSVGTYSTLLNALFKAGKPSEAHVVLRRLISHTSCFPDELWYVGLIAAYSNQDQVE 693

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA  +L  L        ++ YNTL+ GL +   ++    L  +M  N    ++ T   LI
Sbjct: 694 EARNVLQELKSKWGIQSIVAYNTLLKGLFRTRNLQMVYELLREMKRNEFVVNEATFNILI 753

Query: 475 WGFCRADQVEEAVDLLKEIGK 495
            GFCR  Q + AV +L E+ K
Sbjct: 754 QGFCRLGQTDRAVRVLSEMKK 774



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 103/393 (26%), Positives = 176/393 (44%), Gaps = 63/393 (16%)

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           V TYN     +   G+ ++A   +K++  +   P  ITY ILI  +C    +  A  + +
Sbjct: 90  VHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLYE 149

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL---------------LSRGME-- 324
           +M   G  P ++T   L+N  CK G  + A+     +               L R +   
Sbjct: 150 EMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRVD 209

Query: 325 --------------PNSITYNTLLHSLGSRGCWDAVDKILDIM---NEASHSPTV----- 362
                         PN+ TY  +++ L   G     +++L  M     A+++  +     
Sbjct: 210 EACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHCK 269

Query: 363 -----------------------FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
                                   TYN LI+G C+   +DRA     +M S +  PDI T
Sbjct: 270 AGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIFT 329

Query: 400 YNTVLGALCKEGMLNEALQLLHLL-NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           Y+ ++  LC+   L+EA  LL  L N   C+P +++YNTLIDG +K   +  A  L+ +M
Sbjct: 330 YDILIAGLCRAKRLSEARDLLGTLRNEDDCTPNVVSYNTLIDGFSKAARVNDAYQLFLEM 389

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           +  G  PD +T+ TLI G C A +  EA   L+E+  +    +   Y  VI GLC++ ++
Sbjct: 390 VTAGQHPDVVTYSTLIRGLCNAGRASEAHSYLEEMVGKKILPKVPVYSSVISGLCRAGEL 449

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           D A  V + M+++  +P+  V+++++  +   G
Sbjct: 450 DAASTVFDSMVANGCQPNLAVYNSLIYGLCKTG 482



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 60/261 (22%), Positives = 99/261 (37%), Gaps = 62/261 (23%)

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           TV TYN     L + G  + A   F +   +   PD +TY  ++  LC  G L  A  L 
Sbjct: 89  TVHTYNCFYEALIRTGQCEEAYRLFKEKWPQELIPDSITYGILIRGLCNFGKLKLACSLY 148

Query: 421 H----------------LLNG----------------SSCSPCLITYNTLIDGLAKKGCM 448
                            LLN                  S  PC  T+  LIDGL +   +
Sbjct: 149 EEMVDRGLRPVVLTCKFLLNALCKSGNLELALRYFEKMSSIPCAATWTILIDGLFRAIRV 208

Query: 449 EKAMVLYGQMMENGIS------------------------------PDDITHRTLIWGFC 478
           ++A   + +M    I                               P    + ++I G C
Sbjct: 209 DEACYYFEEMKHTAIPNNWTYTVVINGLVKAGKVAEAERVLQEMPVPTLANYTSVIGGHC 268

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A  + +A  LL+++ ++G +  N  Y  +IHG C+ +++D A ++LE M S+ + PD  
Sbjct: 269 KAGDMGKAYHLLEDMKRKGYQGDNLTYNTLIHGHCRLQEIDRAYELLEEMKSNDFVPDIF 328

Query: 539 VFSTIVKKVADDGMTEEAYKL 559
            +  ++  +       EA  L
Sbjct: 329 TYDILIAGLCRAKRLSEARDL 349


>gi|297847648|ref|XP_002891705.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297337547|gb|EFH67964.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 823

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 133/490 (27%), Positives = 227/490 (46%), Gaps = 41/490 (8%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  CS GK+ +  KLI+    +  +P+  F   +I G  ++  IE A  V + + + G
Sbjct: 211 MVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKG 270

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG------------------------- 217
            +P   T+  M+ G CK+G   ++  LL+E+   G                         
Sbjct: 271 FMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPA 330

Query: 218 ----------CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
                     C+PD+ TYN ++  +   GK + A G   +  +KG     ++Y  LI+  
Sbjct: 331 ESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAY 390

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           CK      A ++L  +A  GC PDIVTY  L++     G  DDAV +   L+ RG+ P++
Sbjct: 391 CKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDA 450

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
             YN L+  L   G +     +   M + S  P  + Y  LI+G  + G  D A   F  
Sbjct: 451 AIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTL 510

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
            V K  + D+V +N ++   C+ GML+EAL  ++ +N     P   TY+T+IDG  K+  
Sbjct: 511 SVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQD 570

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           M  A+ ++  M +N   P+ +T+ +LI GFC       A +  KE+  R        Y  
Sbjct: 571 MATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTT 630

Query: 508 VIHGLCK-SKKVDMAIQVLELMISSRYKPDDTVFSTI----VKKVADDGMTE-EAYKLWQ 561
           +I    K S  ++ A+   ELM++++  P++  F+ +    VKK +   + E + +   Q
Sbjct: 631 LIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQ 690

Query: 562 KLIEWKVFEK 571
             + ++ F +
Sbjct: 691 SFLFFEFFHR 700



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 113/444 (25%), Positives = 207/444 (46%), Gaps = 3/444 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L       +L DA K+ D M  R    D +    +++G+    ++E+  K+++    
Sbjct: 174 NALLSLVVKSRRLEDARKVYDEMCERGGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWG 233

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G VP+ + YN ++GG CK G I +A  +  E+ + G  P + T+ T++      G F  
Sbjct: 234 KGCVPNIVFYNTIIGGYCKLGDIENAKLVFKELKLKGFMPTLETFGTMINGFCKKGDFVA 293

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           +    ++   +G    +     +I+   +        E +  +    C PDI TYN L+N
Sbjct: 294 SDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRWIVANDCKPDIATYNILIN 353

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK+GK + A  +++    +G+   +++Y  L+ +      +D   K+L  + E    P
Sbjct: 354 RLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKP 413

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TY ILI+GL   G +D A+N   +++ +   PD   YN ++  LCK G    A  L 
Sbjct: 414 DIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLF 473

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +   S  P    Y TLIDG  + G  ++A  ++   +E G+  D + H  +I GFCR+
Sbjct: 474 SEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRS 533

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             ++EA+  +  + +         Y  +I G  K + +  AI++   M  ++ KP+   +
Sbjct: 534 GMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEKNKCKPNVVTY 593

Query: 541 STIVKKV---ADDGMTEEAYKLWQ 561
           ++++       D  + EE +K  Q
Sbjct: 594 TSLINGFCCQGDFSLAEETFKEMQ 617



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 116/442 (26%), Positives = 206/442 (46%), Gaps = 1/442 (0%)

Query: 123 ILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +L  +   G L+ A ++ D ++   + +PD   C  L+  +++  R+E A KV   M   
Sbjct: 140 VLHAYAESGFLSKAVEIYDYVVELYDSVPDVIACNALLSLVVKSRRLEDARKVYDEMCER 199

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           GG  D  +  +MV G+C  G++     L+++    GC P+++ YNTI+      G  + A
Sbjct: 200 GGCVDNYSTCIMVKGMCSEGKVEEGRKLIEDRWGKGCVPNIVFYNTIIGGYCKLGDIENA 259

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              +K+   KG  P L T+  +I   CK+     +  +L+++   G    +   N++++ 
Sbjct: 260 KLVFKELKLKGFMPTLETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDA 319

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             + G   D    I  +++   +P+  TYN L++ L   G  +    +LD  ++     T
Sbjct: 320 KYRHGFKVDPAESIRWIVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILT 379

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             +Y  LI   CK    D A     Q+  + C+PDIVTY  ++  L   G +++A+ +  
Sbjct: 380 NLSYAPLIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKV 439

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L     SP    YN L+ GL K G    A +L+ +M++  I PD   + TLI GF R+ 
Sbjct: 440 KLIDRGVSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSG 499

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
             +EA  +     ++G K+    +  +I G C+S  +D A+  +  M      PD   +S
Sbjct: 500 DFDEARKVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYS 559

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
           TI+           A K+++ +
Sbjct: 560 TIIDGYVKQQDMATAIKIFRDM 581



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 96/371 (25%), Positives = 180/371 (48%), Gaps = 1/371 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T   ++  FC +G    + +L++ +  R       F  N+I    R       ++ ++ 
Sbjct: 276 ETFGTMINGFCKKGDFVASDRLLEEVKERGLRVCVWFLNNIIDAKYRHGFKVDPAESIRW 335

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           +V +   PD  TYN+++  LCK G+   A  LLDE S  G     ++Y  +++    + +
Sbjct: 336 IVANDCKPDIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKE 395

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           +  A         +GC P ++TY ILI  +     +  A+ +   +   G SPD   YN 
Sbjct: 396 YDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNM 455

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  CK G++  A L+ + +L R + P++  Y TL+      G +D   K+  +  E  
Sbjct: 456 LMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKG 515

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
               V  +N +I G C+ G++D A+   N+M  ++  PD  TY+T++    K+  +  A+
Sbjct: 516 VKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAI 575

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++   +  + C P ++TY +LI+G   +G    A   + +M    + P+ +T+ TLI  F
Sbjct: 576 KIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSF 635

Query: 478 CR-ADQVEEAV 487
            + +  +E+AV
Sbjct: 636 AKESSTLEKAV 646



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 106/430 (24%), Positives = 183/430 (42%), Gaps = 22/430 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++   C  GK   A+ L+D  +++  I        LI+   +    + ASK+L
Sbjct: 344 DIATYNILINRLCKEGKKEVAAGLLDEASKKGLILTNLSYAPLIQAYCKSKEYDIASKLL 403

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +   G  PD +TY +++ GL   G +  A+ +  ++   G  PD   YN ++  +   
Sbjct: 404 LQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRGVSPDAAIYNMLMSGLCKT 463

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+F  A   + + L +   P    Y  LI+   +      A +V      +G   D+V +
Sbjct: 464 GRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEARKVFTLSVEKGVKVDVVHH 523

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++   C+ G  D+A+  +N +    + P+  TY+T++     +       KI   M +
Sbjct: 524 NAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGYVKQQDMATAIKIFRDMEK 583

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE-GMLN 414
               P V TY  LING C  G    A  +F +M S++  P++VTY T++ +  KE   L 
Sbjct: 584 NKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNVVTYTTLIRSFAKESSTLE 643

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A+    L+  + C P  +T+N L+ G  KK          G+ +     PD   H    
Sbjct: 644 KAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTS--------GRFLG---EPDGFNHGQSF 692

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             F          +    +   G     +AY  V+  LC    V  A  + + M+   + 
Sbjct: 693 LFF----------EFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFS 742

Query: 535 PDDTVFSTIV 544
           PD   F+ I+
Sbjct: 743 PDPVSFAAIL 752



 Score =  127 bits (320), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 101/405 (24%), Positives = 162/405 (40%), Gaps = 83/405 (20%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++Q +C   +   ASKL+  +A R   PD      LI GL+    ++ A  +   ++  G
Sbjct: 386 LIQAYCKSKEYDIASKLLLQLAERGCKPDIVTYGILIHGLVVSGHMDDAVNMKVKLIDRG 445

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD   YNM++ GLCK G+   A  L  EM      PD   Y T++     +G F +A 
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEAR 505

Query: 243 GFWKDQLRKGCP-----------------------------------PYLITYTILIEQV 267
             +   + KG                                     P   TY+ +I+  
Sbjct: 506 KVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
            KQ  +A AI++  DM    C P++VTY SL+N  C QG +  A      + SR + PN 
Sbjct: 566 VKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNV 625

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +TY TL+ S                   A  S T                +++A+  +  
Sbjct: 626 VTYTTLIRSF------------------AKESST----------------LEKAVYYWEL 651

Query: 388 MVSKNCQPDIVTYNTVLGALCKEG---MLNEA-----------LQLLHLLNGSSCSPCLI 433
           M++  C P+ VT+N +L    K+     L E             +  H +     S    
Sbjct: 652 MMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDGFNHGQSFLFFEFFHRMKSDGWSDHGA 711

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            YN+++  L   G ++ A +L  +M++ G SPD ++   ++ GFC
Sbjct: 712 AYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDPVSFAAILHGFC 756



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 85/314 (27%), Positives = 137/314 (43%), Gaps = 15/314 (4%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D    N ++   C  G+   A  L   M  R+ +PD +    LI G IR    ++A 
Sbjct: 446 VSPDAAIYNMLMSGLCKTGRFLPAKLLFSEMLDRSILPDAYVYATLIDGFIRSGDFDEAR 505

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KV  + V  G   D + +N M+ G C+ G +  A+A ++ M+     PD  TY+TI+   
Sbjct: 506 KVFTLSVEKGVKVDVVHHNAMIKGFCRSGMLDEALACMNRMNEEHLVPDKFTYSTIIDGY 565

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                   AI  ++D  +  C P ++TYT LI   C Q   + A E   +M      P++
Sbjct: 566 VKQQDMATAIKIFRDMEKNKCKPNVVTYTSLINGFCCQGDFSLAEETFKEMQSRDLVPNV 625

Query: 293 VTYNSLV-NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR------GCWDA 345
           VTY +L+ +F+ +    + AV     +++    PN +T+N LL     +      G  D 
Sbjct: 626 VTYTTLIRSFAKESSTLEKAVYYWELMMTNKCVPNEVTFNCLLQGFVKKTSGRFLGEPDG 685

Query: 346 VD--------KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            +        +    M     S     YN ++  LC +G+V  A    ++MV K   PD 
Sbjct: 686 FNHGQSFLFFEFFHRMKSDGWSDHGAAYNSVLVCLCVHGMVKTACMLQDRMVKKGFSPDP 745

Query: 398 VTYNTVLGALCKEG 411
           V++  +L   C  G
Sbjct: 746 VSFAAILHGFCVVG 759


>gi|14532710|gb|AAK64156.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 124/473 (26%), Positives = 218/473 (46%), Gaps = 40/473 (8%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
            G +  A  L D M     IP      +LI G  R   + +  ++L  M     V    T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y  +V G+C  G +  A  ++ EM  SGC P+V+ Y T+++T   N +F  A+   K+  
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS------------ 297
            +G  P +  Y  LI  + K   +  A   L +M   G  P+  TY +            
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539

Query: 298 -----------------------LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
                                  L+N  CK+GK  +A     +++ +G+  ++ TY  L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLM 599

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           + L      D  ++I   M     +P VF+Y +LING  K G + +A + F++MV +   
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+++ YN +LG  C+ G + +A +LL  ++     P  +TY T+IDG  K G + +A  L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M   G+ PD   + TL+ G CR + VE A+ +     K+G     + +  +I+ + K
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFK 778

Query: 515 SKKVDMAIQVLELMISSRY----KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             K ++  +VL  ++   +    KP+D  ++ ++  +  +G  E A +L+ ++
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 178/372 (47%), Gaps = 10/372 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D KT   ++       K+ DA ++   M  +   PD      LI G  ++  ++KAS + 
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  P+ I YNM++GG C+ G+I  A  LLDEMSV G  P+ +TY TI+     +
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   + +   KG  P    YT L++  C+   + RAI +      +GC+     +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPF 769

Query: 296 NSLVNFSCKQGKYDDAVLVINNLL----SRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           N+L+N+  K GK +    V+N L+     R  +PN +TYN ++  L   G  +A  ++  
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M  A+  PTV TY  L+NG  K G        F++ ++   +PD + Y+ ++ A  KEG
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889

Query: 412 MLNEALQLLHLLNGSS-----CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           M  +AL L+  +   +     C   + T   L+ G AK G ME A  +   M+     PD
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949

Query: 467 DITHRTLIWGFC 478
             T   LI   C
Sbjct: 950 SATVIELINESC 961



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 217/441 (49%), Gaps = 22/441 (4%)

Query: 113 VENDEKTN----NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           VEN  K N       +  +    +   A K +  M     +P+   C  LI    +  ++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKV 573

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A    + MV  G + D  TY +++ GL K  ++  A  +  EM   G  PDV +Y  +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G  ++A   + + + +G  P +I Y +L+   C+   I +A E+LD+M+++G 
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC--WDAV 346
            P+ VTY ++++  CK G   +A  + + +  +G+ P+S  Y TL+      GC   + V
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD-----GCCRLNDV 748

Query: 347 DKILDIM--NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS----KNCQPDIVTY 400
           ++ + I   N+   + +   +N LIN + K+G  +      N+++     +  +P+ VTY
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N ++  LCKEG L  A +L H +  ++  P +ITY +L++G  K G   +   ++ + + 
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR-----GNKMRNSAYRLVIHGLCKS 515
            GI PD I +  +I  F +     +A+ L+ ++  +     G K+  S  R ++ G  K 
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928

Query: 516 KKVDMAIQVLELMISSRYKPD 536
            ++++A +V+E M+  +Y PD
Sbjct: 929 GEMEVAEKVMENMVRLQYIPD 949



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 210/496 (42%), Gaps = 40/496 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++  CS G L  A  ++  M      P+      LI+  ++  R   A +VL+ M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD   YN ++ GL K  ++  A + L EM  +G +P+  TY   +    +  +F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  + K+    G  P  +  T LI + CK+  +  A      M  +G   D  TY  L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   K  K DDA  +   +  +G+ P+  +Y  L++     G       I D M E   
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V  YN+L+ G C+ G +++A    ++M  K   P+ VTY T++   CK G L EA +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG---------------------- 456
           L   +      P    Y TL+DG  +   +E+A+ ++G                      
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFK 778

Query: 457 ------------QMMENGI----SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
                       ++M+        P+D+T+  +I   C+   +E A +L  ++ +  N M
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM-QNANLM 837

Query: 501 RNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +++G  K  +      V +  I++  +PD  ++S I+     +GMT +A  L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897

Query: 560 WQKLIEWKVFEKGTTL 575
             ++      + G  L
Sbjct: 898 VDQMFAKNAVDDGCKL 913



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 100/473 (21%), Positives = 201/473 (42%), Gaps = 56/473 (11%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR---- 204
           +P    C  L+  L+R +R++    V + MV    V D  TY+M++   C+ G ++    
Sbjct: 183 VPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVVFDVKTYHMLIIAHCRAGNVQLGKD 242

Query: 205 -----------------SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
                             A+ L + M   G  P   TY+ ++  +    + + A     +
Sbjct: 243 VLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKYTYDVLIDGLCKIKRLEDAKSLLVE 302

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
               G      TY++LI+ + K      A  ++ +M   G +     Y+  +    K+G 
Sbjct: 303 MDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVHEMVSHGINIKPYMYDCCICVMSKEGV 362

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            + A  + + +++ G+ P +  Y +L+             ++L  M + +   + +TY  
Sbjct: 363 MEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYTYGT 422

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           ++ G+C  G +D A N   +M++  C+P++V Y T++    +     +A+++L  +    
Sbjct: 423 VVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMKEQG 482

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA- 486
            +P +  YN+LI GL+K   M++A     +M+ENG+ P+  T+   I G+  A +   A 
Sbjct: 483 IAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFASAD 542

Query: 487 ------------------VDLLKEIGKRGNKMRN-SAYR---------------LVIHGL 512
                               L+ E  K+G  +   SAYR               ++++GL
Sbjct: 543 KYVKEMRECGVLPNKVLCTGLINEYCKKGKVIEACSAYRSMVDQGILGDAKTYTVLMNGL 602

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            K+ KVD A ++   M      PD   +  ++   +  G  ++A  ++ +++E
Sbjct: 603 FKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVE 655



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 5/162 (3%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F + ++ T N ++   C  G L  A +L   M   N +P      +L+ G  ++ R  + 
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-----GCEPDVITYN 226
             V    + +G  PD I Y++++    K G    A+ L+D+M        GC+  + T  
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
            +L      G+ + A    ++ +R    P   T   LI + C
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 46/221 (20%), Positives = 87/221 (39%), Gaps = 40/221 (18%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKN------------CQPDIV-------TYNTVL 404
           +++ L   LC +G  ++A++   +M+ +N            C  + V        +  + 
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
                +  + EA+ +     G    P L     L+D L +   ++    +Y  M+E  + 
Sbjct: 159 DGYIAKEYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN----------KMRNS----------- 503
            D  T+  LI   CRA  V+   D+L +  K             K++ S           
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY 278

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            Y ++I GLCK K+++ A  +L  M S     D+  +S ++
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319


>gi|297801450|ref|XP_002868609.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297314445|gb|EFH44868.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 526

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 231/485 (47%), Gaps = 44/485 (9%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIM 178
           +IL+N     +  +A  L   M     +P   DF   +N+I  + + D +    K LQIM
Sbjct: 41  EILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQIM 100

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +S    D  T N+++   C+  Q   A + L ++   G EPD+ T+ +++       + 
Sbjct: 101 GVSN---DLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRI 157

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+      +  G  P ++ YT +I+ +CK   +  A+ + + M   G  PD+V Y SL
Sbjct: 158 EEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSL 217

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  C  G++ DA L++  ++ R ++P+ IT+N L+ +    G      ++ + M + S 
Sbjct: 218 VNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSI 277

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P +FTY  LINGLC  G +D A   F  M +K C PD+V Y +++   CK   + +A++
Sbjct: 278 APNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMK 337

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           + + ++    +   ITY TLI G    G    A  ++G M+  G+ P+  T+  L+   C
Sbjct: 338 IFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLC 397

Query: 479 RADQVEEAVDLLKEIGKR---GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM------- 528
              +V +A+ + +++ KR   G       Y +++HGLC + K++ A+ V   M       
Sbjct: 398 YNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDI 457

Query: 529 ----------------------------ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
                                        S   KP+   ++T++  +  +G+  EA+ L+
Sbjct: 458 GIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFREGLMLEAHVLF 517

Query: 561 QKLIE 565
           +K+ E
Sbjct: 518 RKMKE 522



 Score =  184 bits (468), Expect = 8e-44,   Method: Compositional matrix adjust.
 Identities = 116/405 (28%), Positives = 206/405 (50%), Gaps = 3/405 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V ND  T N ++  FC   +   AS  +  + +    PD     +LI G    +RIE+A 
Sbjct: 102 VSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNRIEEAM 161

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  MV  G  PD + Y  ++  LCK G + +A++L ++M   G  PDV+ Y +++  +
Sbjct: 162 SMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTSLVNGL 221

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            ++G+++ A    +  +++   P +IT+  LI+   K+  +  A E+ ++M     +P+I
Sbjct: 222 CNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMSIAPNI 281

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY SL+N  C +G+ D+A  +   + ++G  P+ + Y +L++        +   KI   
Sbjct: 282 FTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAMKIFYE 341

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M++   +    TY  LI G    G  + A   F  MVS+   P+I TYN +L  LC  G 
Sbjct: 342 MSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGVPPNIRTYNVLLHCLCYNGK 401

Query: 413 LNEALQLLHLLNG---SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +N+AL +   +         P + TYN L+ GL   G +EKA++++G M +  +    IT
Sbjct: 402 VNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYNGKLEKALMVFGDMQKRDMDIGIIT 461

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +  +I G C+A +V++A++L   +  +G K     Y  +I GL +
Sbjct: 462 YTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTYTTMISGLFR 506



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 113/387 (29%), Positives = 188/387 (48%), Gaps = 3/387 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T   ++  FC   ++ +A  +++ M      PD      +I  L +   ++ A  
Sbjct: 138 EPDIFTFTSLINGFCLGNRIEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALS 197

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G  PD + Y  +V GLC  G+ R A  LL  M     +PDVIT+N ++    
Sbjct: 198 LFNQMENYGIRPDVVMYTSLVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFV 257

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK   A   + + ++    P + TYT LI  +C +  +  A ++   M  +GC PD+V
Sbjct: 258 KEGKLLDAKELYNEMIQMSIAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVV 317

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y SL+N  CK  K +DA+ +   +  +G+  N+ITY TL+   G  G  +   ++   M
Sbjct: 318 AYTSLINGFCKCKKVEDAMKIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHM 377

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ---PDIVTYNTVLGALCKE 410
                 P + TYN+L++ LC  G V++A+  F  M  +      P+I TYN +L  LC  
Sbjct: 378 VSRGVPPNIRTYNVLLHCLCYNGKVNKALMIFEDMQKREIDGVPPNIRTYNVLLHGLCYN 437

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G L +AL +   +        +ITY  +I G+ K G ++ A+ L+  +   G+ P+ +T+
Sbjct: 438 GKLEKALMVFGDMQKRDMDIGIITYTIIIQGMCKAGKVKDALNLFCSLPSKGVKPNVVTY 497

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRG 497
            T+I G  R   + EA  L +++ + G
Sbjct: 498 TTMISGLFREGLMLEAHVLFRKMKEDG 524



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 96/346 (27%), Positives = 170/346 (49%), Gaps = 4/346 (1%)

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  ILR    + +F +A+  +   +     P +I +T L+  + K       I +   + 
Sbjct: 39  YREILRNGLHSLQFNEALDLFSHMVESRPLPSIIDFTRLLNVIAKMKKFDVVINLCKHLQ 98

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS--LGSRGC 342
           I G S D+ T N L+N  C+  +   A   +  L+  G EP+  T+ +L++   LG+R  
Sbjct: 99  IMGVSNDLYTCNLLMNCFCQSSQPCLASSFLGKLMKLGFEPDIFTFTSLINGFCLGNR-- 156

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            +    +++ M E    P V  Y  +I+ LCK G VD A++ FNQM +   +PD+V Y +
Sbjct: 157 IEEAMSMVNQMVEMGIKPDVVIYTTIIDSLCKNGHVDNALSLFNQMENYGIRPDVVMYTS 216

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  LC  G   +A  LL  +      P +IT+N LID   K+G +  A  LY +M++  
Sbjct: 217 LVNGLCNSGRWRDADLLLRGMMKRKIKPDVITFNALIDAFVKEGKLLDAKELYNEMIQMS 276

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           I+P+  T+ +LI G C   +++EA  +   +  +G      AY  +I+G CK KKV+ A+
Sbjct: 277 IAPNIFTYTSLINGLCMEGRLDEARQMFYLMETKGCFPDVVAYTSLINGFCKCKKVEDAM 336

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++   M       +   ++T+++     G    A +++  ++   V
Sbjct: 337 KIFYEMSQKGLTGNTITYTTLIQGFGLVGKPNVAQEVFGHMVSRGV 382


>gi|15235288|ref|NP_193742.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75098720|sp|O49436.1|PP327_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g20090; AltName: Full=Protein EMBRYO DEFECTIVE 1025
 gi|2827663|emb|CAA16617.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|7268804|emb|CAB79009.1| membrane-associated salt-inducible-like protein [Arabidopsis
           thaliana]
 gi|58013024|gb|AAW62965.1| embryo-defective 1025 [Arabidopsis thaliana]
 gi|332658871|gb|AEE84271.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 660

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/482 (26%), Positives = 231/482 (47%), Gaps = 53/482 (10%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +++  C    +  A ++   M  R  +PD +    L+ GL + +RI++A  +L  M  
Sbjct: 191 NLVIKALCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQS 250

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  + YN+++ GLCK+G +     L+D M + GC P+ +TYNT++  +   GK  +
Sbjct: 251 EGCSPSPVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDK 310

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM----------------- 283
           A+   +  +   C P  +TY  LI  + KQ     A+ +L  M                 
Sbjct: 311 AVSLLERMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLIS 370

Query: 284 ------------------AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
                             A +GC P+IV Y+ LV+  C++GK ++A  ++N +++ G  P
Sbjct: 371 GLFKEGKAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLP 430

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           N+ TY++L+      G  +   ++   M++   S   F Y++LI+GLC  G V  A+  +
Sbjct: 431 NAYTYSSLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVW 490

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL---NGSSCSPCLITYNTLIDGL 442
           ++M++   +PD V Y++++  LC  G ++ AL+L H +         P ++TYN L+DGL
Sbjct: 491 SKMLTIGIKPDTVAYSSIIKGLCGIGSMDAALKLYHEMLCQEEPKSQPDVVTYNILLDGL 550

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
             +  + +A+ L   M++ G  PD IT  T +             + L E     +K R+
Sbjct: 551 CMQKDISRAVDLLNSMLDRGCDPDVITCNTFL-------------NTLSEKSNSCDKGRS 597

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY-KLWQ 561
               LV+  L K ++V  A  ++E+M+     P  + ++ IV+++        A  K W+
Sbjct: 598 FLEELVVR-LLKRQRVSGACTIVEVMLGKYLAPKTSTWAMIVREICKPKKINAAIDKCWR 656

Query: 562 KL 563
            L
Sbjct: 657 NL 658



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 120/453 (26%), Positives = 220/453 (48%), Gaps = 5/453 (1%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           + T + +++++ + G      KL+  +   N++      I + R   +    +KA  +  
Sbjct: 77  DSTLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFH 136

Query: 177 IMVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSG----CEPDVITYNTILRT 231
            MV       ++ ++N ++  +   G     +   D +  S       P+ +++N +++ 
Sbjct: 137 RMVDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKA 196

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +       +AI  ++    + C P   TY  L++ +CK+  I  A+ +LD+M  EGCSP 
Sbjct: 197 LCKLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPS 256

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            V YN L++  CK+G       +++N+  +G  PN +TYNTL+H L  +G  D    +L+
Sbjct: 257 PVIYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLE 316

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M  +   P   TY  LINGL K      A+   + M  +    +   Y+ ++  L KEG
Sbjct: 317 RMVSSKCIPNDVTYGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEG 376

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
              EA+ L   +    C P ++ Y+ L+DGL ++G   +A  +  +M+ +G  P+  T+ 
Sbjct: 377 KAEEAMSLWRKMAEKGCKPNIVVYSVLVDGLCREGKPNEAKEILNRMIASGCLPNAYTYS 436

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +L+ GF +    EEAV + KE+ K G       Y ++I GLC   +V  A+ V   M++ 
Sbjct: 437 SLMKGFFKTGLCEEAVQVWKEMDKTGCSRNKFCYSVLIDGLCGVGRVKEAMMVWSKMLTI 496

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             KPD   +S+I+K +   G  + A KL+ +++
Sbjct: 497 GIKPDTVAYSSIIKGLCGIGSMDAALKLYHEML 529



 Score =  141 bits (356), Expect = 9e-31,   Method: Compositional matrix adjust.
 Identities = 77/241 (31%), Positives = 131/241 (54%), Gaps = 4/241 (1%)

Query: 329 TYNTLLHSLGSRGCW----DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           ++N++L+ + + G +    +  D +++     + SP   ++N++I  LCK   VDRAI  
Sbjct: 150 SFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALCKLRFVDRAIEV 209

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F  M  + C PD  TY T++  LCKE  ++EA+ LL  +    CSP  + YN LIDGL K
Sbjct: 210 FRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPVIYNVLIDGLCK 269

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           KG + +   L   M   G  P+++T+ TLI G C   ++++AV LL+ +        +  
Sbjct: 270 KGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERMVSSKCIPNDVT 329

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I+GL K ++   A+++L  M    Y  +  ++S ++  +  +G  EEA  LW+K+ 
Sbjct: 330 YGTLINGLVKQRRATDAVRLLSSMEERGYHLNQHIYSVLISGLFKEGKAEEAMSLWRKMA 389

Query: 565 E 565
           E
Sbjct: 390 E 390



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 129/251 (51%), Gaps = 5/251 (1%)

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           T ++++ S  + G +D+V+K+L  +   +      ++ ++     K  L D+A++ F++M
Sbjct: 79  TLSSMIESYANSGDFDSVEKLLSRIRLENRVIIERSFIVVFRAYGKAHLPDKAVDLFHRM 138

Query: 389 VSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS----CSPCLITYNTLIDGLA 443
           V +  C+  + ++N+VL  +  EG+ +  L+    +  S+     SP  +++N +I  L 
Sbjct: 139 VDEFRCKRSVKSFNSVLNVIINEGLYHRGLEFYDYVVNSNMNMNISPNGLSFNLVIKALC 198

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K   +++A+ ++  M E    PD  T+ TL+ G C+ ++++EAV LL E+   G      
Sbjct: 199 KLRFVDRAIEVFRGMPERKCLPDGYTYCTLMDGLCKEERIDEAVLLLDEMQSEGCSPSPV 258

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y ++I GLCK   +    ++++ M      P++  ++T++  +   G  ++A  L +++
Sbjct: 259 IYNVLIDGLCKKGDLTRVTKLVDNMFLKGCVPNEVTYNTLIHGLCLKGKLDKAVSLLERM 318

Query: 564 IEWKVFEKGTT 574
           +  K      T
Sbjct: 319 VSSKCIPNDVT 329


>gi|357449161|ref|XP_003594857.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355483905|gb|AES65108.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 647

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 118/433 (27%), Positives = 219/433 (50%), Gaps = 4/433 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINL-IRGLIRIDRIEKASKVLQIMV 179
           N ++Q  C    L   + +ID  +  N  P+     NL I+ L R+  +++A +V + M 
Sbjct: 144 NVVIQEGCFDLALEFYNHVIDSNSFSNIQPN-GLSFNLVIKALCRVGNVDQAVEVFRGMS 202

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
               V D  TY+ ++ GLC  G+I  A++LLDEM V G  P+ + +N ++  +   G   
Sbjct: 203 DRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNVLISALCKKGDLS 262

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A     +   KGC P  +TY  L+  +C +  + +A+ +L+ M    C P+ +T+ +LV
Sbjct: 263 RASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLV 322

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +   K G+  D V V+ +L  +G   N  +Y++L+  L   G  +   ++   M E    
Sbjct: 323 DGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCK 382

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P    Y+ LI+GLC+ G  D A     +M +K   P+  TY++++    + G +++A+ +
Sbjct: 383 PNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILV 442

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +  + C+   + Y+ LI+GL K G +++A++++ QM+  GI  D + + ++I GFC 
Sbjct: 443 WKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCN 502

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           A  VE+ + L  ++     K++     Y ++++  C    V  AI +L  M+     PD 
Sbjct: 503 AQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDF 562

Query: 538 TVFSTIVKKVADD 550
                 +K + D+
Sbjct: 563 ITCDIFLKTLRDN 575



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/450 (25%), Positives = 224/450 (49%), Gaps = 11/450 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++NF +    T   +L+  M   N++      I + +   +    +KA  +   M    
Sbjct: 71  LIENFSNSLDFTSLEQLLHQMKCENRVFIEKSFIIMFKAYGKAHLPQKALDLFHRMGAEF 130

Query: 183 GVPDTI-TYNMMVGGLCKRGQIRSAIAL----LDEMSVSGCEPDVITYNTILRTMFDNGK 237
               T+ ++N ++  + + G    A+      +D  S S  +P+ +++N +++ +   G 
Sbjct: 131 HCKQTVKSFNTVLNVVIQEGCFDLALEFYNHVIDSNSFSNIQPNGLSFNLVIKALCRVGN 190

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             QA+  ++    + C     TY+ L+  +C +  I  A+ +LD+M +EG  P+ V +N 
Sbjct: 191 VDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNV 250

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  CK+G    A  +++N+  +G  PN +TYN+L+H L  +G  D    +L+ M    
Sbjct: 251 LISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANK 310

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVS---KNCQPDIVTYNTVLGALCKEGMLN 414
             P   T+  L++G  K+G   RA++    +VS   K  + +  +Y++++  L KEG   
Sbjct: 311 CVPNDITFGTLVDGFVKHG---RALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGE 367

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
             +QL   +    C P  I Y+ LIDGL ++G  ++A     +M   G +P+  T+ +L+
Sbjct: 368 HGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLM 427

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
           WG+  A  + +A+ + KE+           Y ++I+GLCK+ K+  A+ V + M+S   K
Sbjct: 428 WGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIK 487

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            D   +S+++    +  + E+  KL+ +++
Sbjct: 488 LDVVAYSSMIHGFCNAQLVEQGMKLFNQML 517



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/378 (25%), Positives = 173/378 (45%), Gaps = 32/378 (8%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           ++ +M     K    + A+ L   M     C+  V ++NT+L  +   G F  A+ F+  
Sbjct: 102 SFIIMFKAYGKAHLPQKALDLFHRMGAEFHCKQTVKSFNTVLNVVIQEGCFDLALEFYN- 160

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
                                          V+D  +     P+ +++N ++   C+ G 
Sbjct: 161 ------------------------------HVIDSNSFSNIQPNGLSFNLVIKALCRVGN 190

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D AV V   +  R    +  TY+TL+H L + G  D    +LD M      P    +N+
Sbjct: 191 VDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAFNV 250

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LI+ LCK G + RA    + M  K C P+ VTYN+++  LC +G L++A+ LL+ +  + 
Sbjct: 251 LISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVANK 310

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C P  IT+ TL+DG  K G     + +   + E G   ++ ++ +LI G  +  + E  +
Sbjct: 311 CVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEHGM 370

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L KE+ ++G K     Y  +I GLC+  K D A + L  M +  + P+   +S+++   
Sbjct: 371 QLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGY 430

Query: 548 ADDGMTEEAYKLWQKLIE 565
            + G   +A  +W+++ +
Sbjct: 431 FEAGDIHKAILVWKEMTD 448



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 2/294 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++   C +GKL  A  L++ M     +P+      L+ G ++  R     +VL
Sbjct: 279 NEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVL 338

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +   G   +  +Y+ ++ GL K G+    + L  EM   GC+P+ I Y+ ++  +   
Sbjct: 339 VSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCRE 398

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A  +  +   KG  P   TY+ L+    +   I +AI V  +M    C+   V Y
Sbjct: 399 GKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCY 458

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM-- 353
           + L+N  CK GK  +A++V   +LSRG++ + + Y++++H   +    +   K+ + M  
Sbjct: 459 SILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLC 518

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +     P V TYNIL+N  C    V RAI+  N M+ + C PD +T +  L  L
Sbjct: 519 HNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 572



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 21/119 (17%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF------------------ 152
           P ++ D  T N +L  FC++  ++ A  +++ M  +   PDF                  
Sbjct: 521 PKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQ 580

Query: 153 ---HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
               F   L+  LI+  R   AS ++++M+    +P   T+ + V  LCK  ++R  I+
Sbjct: 581 DGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKTIS 639


>gi|125562731|gb|EAZ08111.1| hypothetical protein OsI_30376 [Oryza sativa Indica Group]
          Length = 794

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/458 (28%), Positives = 223/458 (48%), Gaps = 19/458 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +  T N ++   C +G   DA K+ D M  R  +P+      L+  L    +I++A ++L
Sbjct: 206 NRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLL 265

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G +PD +TYN  + GLCK G++  A   L  +   G    +  Y+ ++  +F  
Sbjct: 266 GSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQA 325

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +F +  G++K  L +   P ++ YTI+I    +   I  A+  LD M  +G  PD   Y
Sbjct: 326 RRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCY 385

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++   C  G  + A  + + +L   +  +S T   ++  L  RG  D   +I D M E
Sbjct: 386 NTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGE 445

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQM-------------VSKNCQPDIVTYNT 402
               PTV TYN LI+G  + G ++ A   F++M             +  N   D  +   
Sbjct: 446 HGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGNNPSLFLRLTLGANQVRDSESLRK 505

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  +C+ G + +A +LL  +  S   P ++TYNTLI+GL K   ++ A+ L+ ++   G
Sbjct: 506 LVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQLKG 565

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           ISPD+IT+ TLI G  RA +  +A+ L + I + G+    S Y  ++  LC+ KK+  AI
Sbjct: 566 ISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQAI 625

Query: 523 QVLELMISSRYK--PDDTVFSTIVKKVA----DDGMTE 554
            +    +  +Y    +  V +   K++     DDG+ E
Sbjct: 626 NLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRE 663



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 222/475 (46%), Gaps = 23/475 (4%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           LP+S   F          ++    S G+  DA +    M      P       +++ L+ 
Sbjct: 133 LPASSSAFA--------ALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
              I  A  +   MV +G  P+  TYN+++ GLCK+G    A+ + DEM   G  P+V  
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKI 244

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  +L ++ + GK  +A+        KGC P  +TY   +  +CK   +  A + L  + 
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             G +  +  Y+ L++   +  ++D+       +L R + P+ + Y  ++      G  +
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
                LD+M +    P  F YN ++  LC +G ++RA    ++M+  N   D  T   ++
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LCK G+++EA+Q+   +    C P ++TYN LIDG  ++G +E+A +L+ + ME G +
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK-MEMGNN 483

Query: 465 P--------------DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           P              D  + R L+   C++ QV +A  LL+ I   G       Y  +I+
Sbjct: 484 PSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLIN 543

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           GLCK++ +D A+++ + +      PD+  + T++  +       +A  L+Q +++
Sbjct: 544 GLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 142/298 (47%)

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            + L D    G       + +LV      G++ DAV   + +      P +  YNT+L +
Sbjct: 122 FDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA 181

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G       + + M  A  +P   TYN+L++GLCK G+   A+  F++M+ +   P+
Sbjct: 182 LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPN 241

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +  Y  +L +LC  G ++EA+QLL  +    C P  +TYN  + GL K G + +A     
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            + + G +     +  LI G  +A + +E     K + +R        Y ++I G  ++ 
Sbjct: 302 MLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +++ A+  L++M    + PD   ++T++K + D G  E A+ L  ++++  +    TT
Sbjct: 362 RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT 419



 Score = 82.4 bits (202), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 79/325 (24%), Positives = 136/325 (41%), Gaps = 26/325 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C RG + +A ++ D M      P       LI G  R  R+E+A  + 
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475

Query: 176 QIMVM-------------SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
             M M             +  V D+ +   +V  +C+ GQ+  A  LL  +  SG  PDV
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVRDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           +TYNT++  +        A+  +K+   KG  P  ITY  LI+ + +      A+ +  +
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +   G SP +  YNS++   C+  K   A+ L ++ L  +   P         H     G
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDG 655

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM------VSKNCQP 395
             D   + L  +++   S +   Y I + GLC+    D A+  F+ +      ++  C  
Sbjct: 656 SLDDGVRELIKIDQEYGSISSNPYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACCA 715

Query: 396 DIVTYNTVLGALCKEGMLNEALQLL 420
            ++ Y      LC +  LN A+ ++
Sbjct: 716 LLINY------LCWDRNLNAAVDIM 734



 Score = 71.2 bits (173), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 19/268 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D ++  K++ + C  G++  A KL+  +     +PD      LI GL +   ++ A ++ 
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + + + G  PD ITY  ++ GL +  +   A+ L   +  SG  P +  YN+++R++   
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRM 618

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTIL------IEQVCKQCGIARAIEVLDDMAIEGCS 289
            K  QAI  W D L K    + +   +L      IE      G+   I++  +      +
Sbjct: 619 KKLSQAINLWLDYLPKKY-NFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGSISSN 677

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDK 348
           P  +    L    C+  + DDA+ + + L   G++        L++ L    CWD  ++ 
Sbjct: 678 PYTIWLIGL----CQVRRTDDALRIFHTLQEFGIDITPACCALLINYL----CWDRNLNA 729

Query: 349 ILDIMNEASHSPTVFTY---NILINGLC 373
            +DIM  A     + +    N L+  LC
Sbjct: 730 AVDIMLYALSKSIILSQPVGNRLLRWLC 757


>gi|224713520|gb|ACN62067.1| PPR-816 [Zea mays]
          Length = 816

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 229/485 (47%), Gaps = 37/485 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASK 173
           D  + N +L++ C++GK   A  L+ +MA    +  PD      +I G  +   + KA  
Sbjct: 183 DVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACD 242

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + MV  G  PD +TY+ +V  LCK   +  A A L +M   G  PD  TYN ++    
Sbjct: 243 LFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYS 302

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G++K+A+  +K+  R+   P ++    L+  +CK   I  A +V D MA++G +PD+ 
Sbjct: 303 STGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 362

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +Y  ++N    +G   D   + + +L  G+ P   T+N L+ +  + G  D    I + M
Sbjct: 363 SYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEM 422

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP------------------ 395
            +    P V TY  +I  LC+ G +D A+  FNQM+ +   P                  
Sbjct: 423 RDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSL 482

Query: 396 -----------------DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
                            DIV + +++  LCK G + +A  +  L       P  + YN L
Sbjct: 483 LKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNML 542

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +DG    G MEKA+ ++  M+  GI P+ + + TL+ G+C+  +++E + L +E+ ++G 
Sbjct: 543 MDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGI 602

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           K     Y ++I GL ++ +   A      M  S    +   +S +++ +  +   +EA  
Sbjct: 603 KPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIF 662

Query: 559 LWQKL 563
           L+++L
Sbjct: 663 LFKEL 667



 Score =  192 bits (489), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 218/448 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  + S G+  +A ++   M R++ +PD      L+  L +  +I++A  V 
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M M G  PD  +Y +M+ G   +G +     L D M   G  P + T+N +++   + 
Sbjct: 350 DTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANC 409

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+  + +    G  P+++TY  +I  +C+   +  A+E  + M  +G  PD   Y
Sbjct: 410 GMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAY 469

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L+   C  G    A  +I+ +++ GM  + + + +++++L   G       I D+   
Sbjct: 470 HCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIFDLTVN 529

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    YN+L++G C  G +++A+  F+ MVS   +P++V Y T++   CK G ++E
Sbjct: 530 VGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDE 589

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            L L   +      P  I YN +IDGL + G    A V + +M E+GI+ +  T+  ++ 
Sbjct: 590 GLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLR 649

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G  +    +EA+ L KE+     K+       +I G+ ++++V+ A  +   +  S   P
Sbjct: 650 GLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVP 709

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
               +S ++  +  +G+ EEA  ++  +
Sbjct: 710 CAVTYSIMITNLIKEGLVEEAEDMFSSM 737



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 108/400 (27%), Positives = 200/400 (50%), Gaps = 3/400 (0%)

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-ALLDEMSVSGCEPDV 222
           R  R E A      ++ +G   D I  + ++ G C+  +   A+  LL      GC PDV
Sbjct: 125 RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 184

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVL 280
            +YN +L+++ + GK  QA    +     G  C P ++ Y  +I+   K+  + +A ++ 
Sbjct: 185 FSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLF 244

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
            +M   G  PD+VTY+S+V+  CK    D A   +  ++++G+ P++ TYN L++   S 
Sbjct: 245 KEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLPDNWTYNNLIYGYSST 304

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G W    ++   M   S  P V   N L+  LCKYG +  A + F+ M  K   PD+ +Y
Sbjct: 305 GQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 364

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             +L     +G L +   L  L+ G   +P + T+N LI   A  G ++KAM+++ +M +
Sbjct: 365 TIMLNGYATKGCLVDMTDLFDLMLGDGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRD 424

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
           +G+ P  +T+ T+I   CR  ++++A++   ++  +G      AY  +I G C    +  
Sbjct: 425 HGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLK 484

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           A +++  ++++  + D   F +I+  +   G   +A  ++
Sbjct: 485 AKELISEIMNNGMRLDIVFFGSIINNLCKLGRVMDAQNIF 524



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 111/427 (25%), Positives = 205/427 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++ + C  GK+ +A  + D MA + Q PD      ++ G      +   + +  +M+ 
Sbjct: 330 NTLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSYTIMLNGYATKGCLVDMTDLFDLMLG 389

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P   T+N+++      G +  A+ + +EM   G +P V+TY T++  +   GK   
Sbjct: 390 DGIAPVICTFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDD 449

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +   + +G  P    Y  LI+  C    + +A E++ ++   G   DIV + S++N
Sbjct: 450 AMEKFNQMIDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIIN 509

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+  DA  + +  ++ G+ P+++ YN L+      G  +   ++ D M  A   P
Sbjct: 510 NLCKLGRVMDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEP 569

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V  Y  L+NG CK G +D  ++ F +M+ K  +P  + YN ++  L + G    A    
Sbjct: 570 NVVGYGTLVNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKF 629

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           H +  S  +    TY+ ++ GL K  C ++A+ L+ ++    +  D IT  T+I G  + 
Sbjct: 630 HEMTESGIAMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQT 689

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +VEEA DL   I + G       Y ++I  L K   V+ A  +   M ++  +PD  + 
Sbjct: 690 RRVEEAKDLFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLL 749

Query: 541 STIVKKV 547
           + +V+++
Sbjct: 750 NHVVREL 756



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 100/403 (24%), Positives = 191/403 (47%), Gaps = 5/403 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++ + + G L  A  + + M      P     + +I  L RI +++ A +    M
Sbjct: 398 TFNVLIKAYANCGMLDKAMIIFNEMRDHGVKPHVVTYMTVIAALCRIGKMDDAMEKFNQM 457

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G VPD   Y+ ++ G C  G +  A  L+ E+  +G   D++ + +I+  +   G+ 
Sbjct: 458 IDQGVVPDKYAYHCLIQGFCTHGSLLKAKELISEIMNNGMRLDIVFFGSIINNLCKLGRV 517

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   +   +  G  P  + Y +L++  C    + +A+ V D M   G  P++V Y +L
Sbjct: 518 MDAQNIFDLTVNVGLHPDAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTL 577

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           VN  CK G+ D+ + +   +L +G++P++I YN ++  L   G           M E+  
Sbjct: 578 VNGYCKIGRIDEGLSLFREMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGI 637

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +    TY+I++ GL K    D AI  F ++ + N + DI+T NT++  + +   + EA  
Sbjct: 638 AMNKCTYSIVLRGLFKNRCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKD 697

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   ++ S   PC +TY+ +I  L K+G +E+A  ++  M   G  PD      ++    
Sbjct: 698 LFASISRSGLVPCAVTYSIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVRELL 757

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVI-----HGLCKSK 516
           + +++  A   L +I +R   + +    L++      G C+ +
Sbjct: 758 KKNEIVRAGAYLSKIDERNFSLEHLTAMLLVDLFSSKGTCREQ 800



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 62/243 (25%), Positives = 116/243 (47%), Gaps = 38/243 (15%)

Query: 359 SPTVFTYNILIN-----------------------------------GLCKYGLVDRAIN 383
           SPT +TY IL++                                   G C+    D A++
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 384 S-FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLID 440
              ++     C PD+ +YN +L +LC +G   +A  LL ++   G+ CSP ++ YNT+ID
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  K+G + KA  L+ +M++ GI PD +T+ +++   C+A  +++A   L+++  +G   
Sbjct: 230 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYSSVVHALCKARAMDKAEAFLRQMVNKGVLP 289

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            N  Y  +I+G   + +   A++V + M      PD    +T++  +   G  +EA  ++
Sbjct: 290 DNWTYNNLIYGYSSTGQWKEAVRVFKEMRRQSILPDVVALNTLMGSLCKYGKIKEARDVF 349

Query: 561 QKL 563
             +
Sbjct: 350 DTM 352



 Score = 85.5 bits (210), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 57/222 (25%), Positives = 107/222 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N ++  +C  GK+  A ++ D M      P+      L+ G  +I RI++   + 
Sbjct: 535 DAVVYNMLMDGYCLVGKMEKALRVFDAMVSAGIEPNVVGYGTLVNGYCKIGRIDEGLSLF 594

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  P TI YN+++ GL + G+   A     EM+ SG   +  TY+ +LR +F N
Sbjct: 595 REMLQKGIKPSTILYNIIIDGLFEAGRTVPAKVKFHEMTESGIAMNKCTYSIVLRGLFKN 654

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
             F +AI  +K+         +IT   +I  + +   +  A ++   ++  G  P  VTY
Sbjct: 655 RCFDEAIFLFKELRAMNVKIDIITLNTMIAGMFQTRRVEEAKDLFASISRSGLVPCAVTY 714

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           + ++    K+G  ++A  + +++ + G EP+S   N ++  L
Sbjct: 715 SIMITNLIKEGLVEEAEDMFSSMQNAGCEPDSRLLNHVVREL 756



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 3/140 (2%)

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           SP   TY  L+D   +    E A+  +GQ++  G+  D I    L+ GFC A + +EA+D
Sbjct: 110 SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 169

Query: 489 -LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS--SRYKPDDTVFSTIVK 545
            LL    + G      +Y +++  LC   K   A  +L +M    +   PD   ++T++ 
Sbjct: 170 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADDLLRMMAEGGTVCSPDVVAYNTVID 229

Query: 546 KVADDGMTEEAYKLWQKLIE 565
               +G   +A  L++++++
Sbjct: 230 GFFKEGDVNKACDLFKEMVQ 249


>gi|125604707|gb|EAZ43743.1| hypothetical protein OsJ_28367 [Oryza sativa Japonica Group]
          Length = 812

 Score =  196 bits (497), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 224/460 (48%), Gaps = 23/460 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +  T N ++   C +G   DA K+ D M  R  +P+      L+  L    +I++A ++L
Sbjct: 206 NRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLL 265

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G +PD +TYN  + GLCK G++  A   L  +   G    +  Y+ ++  +F  
Sbjct: 266 GSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQA 325

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +F +  G++K  L +   P ++ YTI+I    +   I  A+  LD M  +G  PD   Y
Sbjct: 326 RRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCY 385

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++   C  G  + A  + + +L   +  +S T   ++  L  RG  D   +I D M E
Sbjct: 386 NTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGE 445

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA--------- 406
               PTV TYN LI+G  + G ++ A   F++M   N  P +    T LGA         
Sbjct: 446 HGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN-NPSLFLRLT-LGANQVCDSESL 503

Query: 407 ------LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
                 +C+ G + +A +LL  +  S   P ++TYNTLI+GL K   ++ A+ L+ ++  
Sbjct: 504 RKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQL 563

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            GISPD+IT+ TLI G  RA +  +A+ L + I + G+    S Y  ++  LC+ KK+  
Sbjct: 564 KGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQ 623

Query: 521 AIQVLELMISSRYK--PDDTVFSTIVKKVA----DDGMTE 554
           AI +    +  +Y    +  V +   K++     DDG+ E
Sbjct: 624 AINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRE 663



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 222/475 (46%), Gaps = 23/475 (4%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           LP+S   F          ++    S G+  DA +    M      P       +++ L+ 
Sbjct: 133 LPASSSAFA--------ALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
              I  A  +   MV +G  P+  TYN+++ GLCK+G    A+ + DEM   G  P+V  
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKI 244

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  +L ++ + GK  +A+        KGC P  +TY   +  +CK   +  A + L  + 
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             G +  +  Y+ L++   +  ++D+       +L R + P+ + Y  ++      G  +
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
                LD+M +    P  F YN ++  LC +G ++RA    ++M+  N   D  T   ++
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LCK G+++EA+Q+   +    C P ++TYN LIDG  ++G +E+A +L+ + ME G +
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK-MEMGNN 483

Query: 465 P--------------DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           P              D  + R L+   C++ QV +A  LL+ I   G       Y  +I+
Sbjct: 484 PSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLIN 543

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           GLCK++ +D A+++ + +      PD+  + T++  +       +A  L+Q +++
Sbjct: 544 GLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 141/298 (47%)

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            + L D    G       + +LV      G+  DAV   + +      P +  YNT+L +
Sbjct: 122 FDALADARAAGLPASSSAFAALVAAHSSAGRNADAVQAFSRMDEFQSRPTAFVYNTILKA 181

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G       + + M  A  +P   TYN+L++GLCK G+   A+  F++M+ +   P+
Sbjct: 182 LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPN 241

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +  Y  +L +LC  G ++EA+QLL  +    C P  +TYN  + GL K G + +A     
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            + + G +     +  LI G  +A + +E     K + +R        Y ++I G  ++ 
Sbjct: 302 MLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +++ A+  L++M    + PD   ++T++K + D G  E A+ L  ++++  +    TT
Sbjct: 362 RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT 419



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 137/326 (42%), Gaps = 28/326 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C RG + +A ++ D M      P       LI G  R  R+E+A  + 
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475

Query: 176 QIMVM-------------SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
             M M             +  V D+ +   +V  +C+ GQ+  A  LL  +  SG  PDV
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           +TYNT++  +        A+  +K+   KG  P  ITY  LI+ + +      A+ +  +
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +   G SP +  YNS++   C+  K   A+ L ++ L  +   P         H     G
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDG 655

Query: 342 CW-DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM------VSKNCQ 394
              D V +++ I  E  +  +   Y I + GLC+    D A+  F+ +      ++  C 
Sbjct: 656 SLDDGVRELIKIDQEYGYISSN-PYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACC 714

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLL 420
             ++ Y      LC +  LN A+ ++
Sbjct: 715 ALLINY------LCWDRNLNAAVDIM 734



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 19/268 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D ++  K++ + C  G++  A KL+  +     +PD      LI GL +   ++ A ++ 
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + + + G  PD ITY  ++ GL +  +   A+ L   +  SG  P +  YN+++R++   
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRM 618

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTIL------IEQVCKQCGIARAIEVLDDMAIEGCS 289
            K  QAI  W D L K    + +   +L      IE      G+   I++  +      +
Sbjct: 619 KKLSQAINLWLDYLPKKY-NFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSN 677

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDK 348
           P  +    L    C+  + DDA+ + + L   G++        L++ L    CWD  ++ 
Sbjct: 678 PYTIWLIGL----CQVRRTDDALRIFHTLQEFGIDITPACCALLINYL----CWDRNLNA 729

Query: 349 ILDIMNEASHSPTVFTY---NILINGLC 373
            +DIM  A     + +    N L+  LC
Sbjct: 730 AVDIMLYALSKSIILSQPVGNRLLRWLC 757


>gi|115477950|ref|NP_001062570.1| Os09g0110200 [Oryza sativa Japonica Group]
 gi|46806362|dbj|BAD17538.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|46806431|dbj|BAD17588.1| PPR protein-like protein [Oryza sativa Japonica Group]
 gi|113630803|dbj|BAF24484.1| Os09g0110200 [Oryza sativa Japonica Group]
          Length = 794

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 135/460 (29%), Positives = 224/460 (48%), Gaps = 23/460 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +  T N ++   C +G   DA K+ D M  R  +P+      L+  L    +I++A ++L
Sbjct: 206 NRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKIYTVLLSSLCNAGKIDEAVQLL 265

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G +PD +TYN  + GLCK G++  A   L  +   G    +  Y+ ++  +F  
Sbjct: 266 GSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQDGGFALGLKGYSCLIDGLFQA 325

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +F +  G++K  L +   P ++ YTI+I    +   I  A+  LD M  +G  PD   Y
Sbjct: 326 RRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIEDALSFLDVMKKKGFVPDTFCY 385

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+++   C  G  + A  + + +L   +  +S T   ++  L  RG  D   +I D M E
Sbjct: 386 NTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMICGLCKRGLVDEAMQIFDEMGE 445

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA--------- 406
               PTV TYN LI+G  + G ++ A   F++M   N  P +    T LGA         
Sbjct: 446 HGCDPTVMTYNALIDGFYREGRLEEARMLFHKMEMGN-NPSLFLRLT-LGANQVCDSESL 503

Query: 407 ------LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
                 +C+ G + +A +LL  +  S   P ++TYNTLI+GL K   ++ A+ L+ ++  
Sbjct: 504 RKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLFKELQL 563

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            GISPD+IT+ TLI G  RA +  +A+ L + I + G+    S Y  ++  LC+ KK+  
Sbjct: 564 KGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRMKKLSQ 623

Query: 521 AIQVLELMISSRYK--PDDTVFSTIVKKVA----DDGMTE 554
           AI +    +  +Y    +  V +   K++     DDG+ E
Sbjct: 624 AINLWLDYLPKKYNFPVESEVLANAHKEIEDGSLDDGVRE 663



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/475 (25%), Positives = 222/475 (46%), Gaps = 23/475 (4%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           LP+S   F          ++    S G+  DA +    M      P       +++ L+ 
Sbjct: 133 LPASSSAFA--------ALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKALVD 184

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
              I  A  +   MV +G  P+  TYN+++ GLCK+G    A+ + DEM   G  P+V  
Sbjct: 185 SGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPNVKI 244

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  +L ++ + GK  +A+        KGC P  +TY   +  +CK   +  A + L  + 
Sbjct: 245 YTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLVMLQ 304

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             G +  +  Y+ L++   +  ++D+       +L R + P+ + Y  ++      G  +
Sbjct: 305 DGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAGRIE 364

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
                LD+M +    P  F YN ++  LC +G ++RA    ++M+  N   D  T   ++
Sbjct: 365 DALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTTQTIMI 424

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LCK G+++EA+Q+   +    C P ++TYN LIDG  ++G +E+A +L+ + ME G +
Sbjct: 425 CGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLFHK-MEMGNN 483

Query: 465 P--------------DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           P              D  + R L+   C++ QV +A  LL+ I   G       Y  +I+
Sbjct: 484 PSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLIN 543

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           GLCK++ +D A+++ + +      PD+  + T++  +       +A  L+Q +++
Sbjct: 544 GLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQ 598



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/298 (25%), Positives = 142/298 (47%)

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            + L D    G       + +LV      G++ DAV   + +      P +  YNT+L +
Sbjct: 122 FDALADARAAGLPASSSAFAALVAAHSSAGRHADAVQAFSRMDEFQSRPTAFVYNTILKA 181

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G       + + M  A  +P   TYN+L++GLCK G+   A+  F++M+ +   P+
Sbjct: 182 LVDSGVILLALALYNRMVAAGCAPNRATYNVLMDGLCKQGMAGDALKMFDEMLDRGIMPN 241

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +  Y  +L +LC  G ++EA+QLL  +    C P  +TYN  + GL K G + +A     
Sbjct: 242 VKIYTVLLSSLCNAGKIDEAVQLLGSMKDKGCLPDEVTYNAFLSGLCKVGRVNEAFQRLV 301

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            + + G +     +  LI G  +A + +E     K + +R        Y ++I G  ++ 
Sbjct: 302 MLQDGGFALGLKGYSCLIDGLFQARRFDEGFGYYKTMLERNISPDVVLYTIMIRGCAEAG 361

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +++ A+  L++M    + PD   ++T++K + D G  E A+ L  ++++  +    TT
Sbjct: 362 RIEDALSFLDVMKKKGFVPDTFCYNTVLKVLCDHGDLERAHTLRSEMLQNNLVLDSTT 419



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 80/326 (24%), Positives = 137/326 (42%), Gaps = 28/326 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C RG + +A ++ D M      P       LI G  R  R+E+A  + 
Sbjct: 416 DSTTQTIMICGLCKRGLVDEAMQIFDEMGEHGCDPTVMTYNALIDGFYREGRLEEARMLF 475

Query: 176 QIMVM-------------SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
             M M             +  V D+ +   +V  +C+ GQ+  A  LL  +  SG  PDV
Sbjct: 476 HKMEMGNNPSLFLRLTLGANQVCDSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDV 535

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
           +TYNT++  +        A+  +K+   KG  P  ITY  LI+ + +      A+ +  +
Sbjct: 536 VTYNTLINGLCKARNLDGAVRLFKELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQN 595

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +   G SP +  YNS++   C+  K   A+ L ++ L  +   P         H     G
Sbjct: 596 ILQSGSSPSLSIYNSMMRSLCRMKKLSQAINLWLDYLPKKYNFPVESEVLANAHKEIEDG 655

Query: 342 CW-DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM------VSKNCQ 394
              D V +++ I  E  +  +   Y I + GLC+    D A+  F+ +      ++  C 
Sbjct: 656 SLDDGVRELIKIDQEYGYISSN-PYTIWLIGLCQVRRTDDALRIFHTLQEFGIDITPACC 714

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLL 420
             ++ Y      LC +  LN A+ ++
Sbjct: 715 ALLINY------LCWDRNLNAAVDIM 734



 Score = 72.0 bits (175), Expect = 9e-10,   Method: Compositional matrix adjust.
 Identities = 64/268 (23%), Positives = 118/268 (44%), Gaps = 19/268 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D ++  K++ + C  G++  A KL+  +     +PD      LI GL +   ++ A ++ 
Sbjct: 499 DSESLRKLVHDMCQSGQVLKAYKLLRSIIDSGVVPDVVTYNTLINGLCKARNLDGAVRLF 558

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + + + G  PD ITY  ++ GL +  +   A+ L   +  SG  P +  YN+++R++   
Sbjct: 559 KELQLKGISPDEITYGTLIDGLLRAHRENDAMMLFQNILQSGSSPSLSIYNSMMRSLCRM 618

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTIL------IEQVCKQCGIARAIEVLDDMAIEGCS 289
            K  QAI  W D L K    + +   +L      IE      G+   I++  +      +
Sbjct: 619 KKLSQAINLWLDYLPKKY-NFPVESEVLANAHKEIEDGSLDDGVRELIKIDQEYGYISSN 677

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDK 348
           P  +    L    C+  + DDA+ + + L   G++        L++ L    CWD  ++ 
Sbjct: 678 PYTIWLIGL----CQVRRTDDALRIFHTLQEFGIDITPACCALLINYL----CWDRNLNA 729

Query: 349 ILDIMNEASHSPTVFTY---NILINGLC 373
            +DIM  A     + +    N L+  LC
Sbjct: 730 AVDIMLYALSKSIILSQPVGNRLLRWLC 757


>gi|302792250|ref|XP_002977891.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
 gi|300154594|gb|EFJ21229.1| hypothetical protein SELMODRAFT_107819 [Selaginella moellendorffii]
          Length = 385

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 106/342 (30%), Positives = 188/342 (54%), Gaps = 16/342 (4%)

Query: 235 NGKFKQAIGFWKDQLRKGCP---------PYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           +G  ++A+  W    R+GC          P  +TY  LI  +CK    + A ++L++M  
Sbjct: 25  HGSHRRALQRWPG--RRGCGAAVQDAEEVPTAVTYNSLISGLCKAERASEAYDLLEEMVY 82

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWD 344
            GC PDI TY +L+   CK  K DDA+ V   L++RG  P+ +TY+ L+  L   G   +
Sbjct: 83  SGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVARGFRPDVVTYSCLIDGLCKEGRLKE 142

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
           A+D    ++   S  P   TYN LI+G C+ G +D A+N   +M      PD+VTY T++
Sbjct: 143 AIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDEAMNLLERMAETGSSPDVVTYTTLM 202

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
              CK   L++A  LL+ +     +P ++T+ +L+DGL ++  +  A+ + G+M     S
Sbjct: 203 NGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHILGEMRRKSCS 262

Query: 465 PDDITHRTLIWGFCRADQVEEAVD-LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           P   T+ T++ G+CR +Q+EEA   +L+E+    N +   ++ ++I GLCK  +   A++
Sbjct: 263 PTVYTYNTILDGYCRVNQLEEARKFMLEEMDCPPNVV---SFNIMIRGLCKVNRSSEAME 319

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++E     R  PD  +++T++  +  +   +EA ++++K++E
Sbjct: 320 LVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLE 361



 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 102/321 (31%), Positives = 180/321 (56%), Gaps = 4/321 (1%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +LI GL + +R  +A  +L+ MV SG +PD  TY  ++ G CK  +   A+ + +++   
Sbjct: 59  SLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQLVAR 118

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIAR 275
           G  PDV+TY+ ++  +   G+ K+AI  +   ++ G C P  +TY  LI   C+   +  
Sbjct: 119 GFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGKMDE 178

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ +L+ MA  G SPD+VTY +L+N  CK  + DDA  ++N +  +G+ PN +T+ +L+ 
Sbjct: 179 AMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMD 238

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L           IL  M   S SPTV+TYN +++G C+   ++ A      +   +C P
Sbjct: 239 GLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMDCPP 296

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           ++V++N ++  LCK    +EA++L+       C+P ++ Y T+ID L ++  +++A  +Y
Sbjct: 297 NVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVY 356

Query: 456 GQMMEN-GISPDDITHRTLIW 475
            +M+E  G  P+ IT+ T  +
Sbjct: 357 RKMLEEPGCLPNSITYSTFDY 377



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 101/321 (31%), Positives = 173/321 (53%), Gaps = 3/321 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           VP  +TYN ++ GLCK  +   A  LL+EM  SGC PD+ TY T++     + K   A+ 
Sbjct: 51  VPTAVTYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALR 110

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFS 302
            ++  + +G  P ++TY+ LI+ +CK+  +  AI++   M   G C P+ VTYNSL++  
Sbjct: 111 VFEQLVARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGF 170

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ GK D+A+ ++  +   G  P+ +TY TL++        D    +L+ M     +P V
Sbjct: 171 CRMGKMDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNV 230

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+  L++GLC+   +  A++   +M  K+C P + TYNT+L   C+   L EA +   +
Sbjct: 231 VTFTSLMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKF--M 288

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L    C P ++++N +I GL K     +AM L  +      +PD + + T+I   CR  +
Sbjct: 289 LEEMDCPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKK 348

Query: 483 VEEAVDLLKEIGKRGNKMRNS 503
           V+EA  + +++ +    + NS
Sbjct: 349 VDEACRVYRKMLEEPGCLPNS 369



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 97/322 (30%), Positives = 165/322 (51%), Gaps = 4/322 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   + ++A  L++ M     IPD      LI G  +  + + A +V + +
Sbjct: 56  TYNSLISGLCKAERASEAYDLLEEMVYSGCIPDIFTYTTLITGFCKSKKSDDALRVFEQL 115

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNGK 237
           V  G  PD +TY+ ++ GLCK G+++ AI L   M  SG C P+ +TYN+++      GK
Sbjct: 116 VARGFRPDVVTYSCLIDGLCKEGRLKEAIDLFGRMIKSGSCMPNTVTYNSLISGFCRMGK 175

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+   +     G  P ++TYT L+   CK   +  A ++L+ M  +G +P++VT+ S
Sbjct: 176 MDEAMNLLERMAETGSSPDVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTS 235

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C++ +  DAV ++  +  +   P   TYNT+L         +   K +  + E  
Sbjct: 236 LMDGLCRENRLSDAVHILGEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFM--LEEMD 293

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V ++NI+I GLCK      A+    +   + C PD+V Y TV+  LC+E  ++EA 
Sbjct: 294 CPPNVVSFNIMIRGLCKVNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEAC 353

Query: 418 QLLH-LLNGSSCSPCLITYNTL 438
           ++   +L    C P  ITY+T 
Sbjct: 354 RVYRKMLEEPGCLPNSITYSTF 375



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 52/185 (28%), Positives = 95/185 (51%), Gaps = 5/185 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  FC   +L DA  L++ M R+   P+     +L+ GL R +R+  A  +L
Sbjct: 194 DVVTYTTLMNGFCKLARLDDAYDLLNQMTRKGLTPNVVTFTSLMDGLCRENRLSDAVHIL 253

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA-LLDEMSVSGCEPDVITYNTILRTMFD 234
             M      P   TYN ++ G C+  Q+  A   +L+EM    C P+V+++N ++R +  
Sbjct: 254 GEMRRKSCSPTVYTYNTILDGYCRVNQLEEARKFMLEEMD---CPPNVVSFNIMIRGLCK 310

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIV 293
             +  +A+   ++  R+ C P ++ YT +I+ +C++  +  A  V   M  E GC P+ +
Sbjct: 311 VNRSSEAMELVEEARRRRCNPDVVMYTTVIDVLCREKKVDEACRVYRKMLEEPGCLPNSI 370

Query: 294 TYNSL 298
           TY++ 
Sbjct: 371 TYSTF 375


>gi|222636130|gb|EEE66262.1| hypothetical protein OsJ_22447 [Oryza sativa Japonica Group]
          Length = 876

 Score =  195 bits (496), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 131/455 (28%), Positives = 222/455 (48%), Gaps = 12/455 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKA 171
           +E +  T N ++  +C  G+L  A  L  +M     Q  ++ + I LI+GL     + KA
Sbjct: 99  LEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQRNEYSYTI-LIQGLCDAKCVRKA 157

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +  +M   G  P+   +  ++ GLCK G++  A  L D M  +G  P V+TYN ++  
Sbjct: 158 LVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVG 217

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G+   A+   +   + GC P   TY  LI  +C Q     A E+L++   EG +P 
Sbjct: 218 YSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCDQ-KTEEAEELLNNAVKEGFTPT 276

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +VT+ +L+N  C   K+DDA+ + N ++S   + +   +  L++SL  +   D + +  +
Sbjct: 277 VVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKK---DRLKEAKE 333

Query: 352 IMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           ++NE S +   P V TY  +I+G CK G VD A+     M    CQP+  TYN+++  L 
Sbjct: 334 LLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLV 393

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K+  L++A+ LL  +      P +ITY TL+ G   +   + A  L+  M +NG+ PD+ 
Sbjct: 394 KDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEH 453

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            +  L    C+A + EEA      I ++G  +    Y  +I G  K+   D A  ++E M
Sbjct: 454 AYAVLTDALCKAGRAEEAYSF---IVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERM 510

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           I     PD   +S ++  +       EA  +  ++
Sbjct: 511 IDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQM 545



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 133/485 (27%), Positives = 224/485 (46%), Gaps = 39/485 (8%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + +E +   ++Q  C    +  A  L  +M R    P+      LI GL +  R+  A  
Sbjct: 135 QRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARL 194

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M  +G VP  +TYN M+ G  K G++  A+ + + M  +GC PD  TYNT++  + 
Sbjct: 195 LFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLC 254

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC------------------------- 268
           D  K ++A     + +++G  P ++T+T LI   C                         
Sbjct: 255 DQ-KTEEAEELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQ 313

Query: 269 ----------KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
                     K+  +  A E+L++++  G  P+++TY S+++  CK GK D A+ V+  +
Sbjct: 314 VFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMM 373

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              G +PN+ TYN+L++ L           +L  M +    P V TY  L+ G C     
Sbjct: 374 ERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDF 433

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A   F  M     +PD   Y  +  ALCK G   EA   + +  G + +   + Y TL
Sbjct: 434 DNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSFI-VRKGVALTK--VYYTTL 490

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           IDG +K G  + A  L  +M++ G +PD  T+  L+   C+  ++ EA+ +L ++  RG 
Sbjct: 491 IDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGI 550

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           K    AY ++I  + +  K D A ++   M SS +KP  T ++  +     +G  E+A  
Sbjct: 551 KCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAED 610

Query: 559 LWQKL 563
           L  K+
Sbjct: 611 LILKM 615



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 212/411 (51%), Gaps = 1/411 (0%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +PD      +I+   +   +  A +  ++++  G  P+T T N +V G C+ G++R A  
Sbjct: 65  LPDTVTYNTMIKSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACW 124

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           L   M + GC+ +  +Y  +++ + D    ++A+  +    R GC P +  +T LI  +C
Sbjct: 125 LFLMMPLMGCQRNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLC 184

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   +  A  + D M   G  P ++TYN+++    K G+ +DA+ +   +   G  P+  
Sbjct: 185 KSGRVGDARLLFDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDW 244

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TYNTL++ L  +   +A +++L+   +   +PTV T+  LING C     D A+   N+M
Sbjct: 245 TYNTLIYGLCDQKTEEA-EELLNNAVKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKM 303

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           +S  C+ D+  +  ++ +L K+  L EA +LL+ ++ +   P +ITY ++IDG  K G +
Sbjct: 304 MSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEISANGLVPNVITYTSIIDGYCKSGKV 363

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           + A+ +   M  +G  P+  T+ +L++G  +  ++ +A+ LL ++ K G       Y  +
Sbjct: 364 DIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTL 423

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           + G C     D A ++ E+M  +  KPD+  ++ +   +   G  EEAY  
Sbjct: 424 LQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRAEEAYSF 474



 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 135/546 (24%), Positives = 233/546 (42%), Gaps = 92/546 (16%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C   K  DA ++ + M       D      LI  LI+ DR+++A ++L  +
Sbjct: 279 TFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRLKEAKELLNEI 338

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G VP+ ITY  ++ G CK G++  A+ +L  M   GC+P+  TYN+++  +  + K 
Sbjct: 339 SANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKL 398

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A+       + G  P +ITYT L++  C +     A  + + M   G  PD   Y  L
Sbjct: 399 HKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVL 458

Query: 299 VNFSCKQGKYDDA--------------------------------VLVINNLLSRGMEPN 326
            +  CK G+ ++A                                  +I  ++  G  P+
Sbjct: 459 TDALCKAGRAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPD 518

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           S TY+ LLH+L  +   +    ILD M+      T+F Y ILI+ + + G  D A   +N
Sbjct: 519 SYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYN 578

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +M S   +P   TY   + + CKEG L +A  L+  +     +P ++TYN LIDG    G
Sbjct: 579 EMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMG 638

Query: 447 CMEKAMV---------------------------------------------------LY 455
            +++A                                                     L 
Sbjct: 639 YIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLL 698

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M+++G++P   T+ +LI GFC+A ++EEA  LL  +  +G       Y L+I   C +
Sbjct: 699 ERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDT 758

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE---------W 566
           K  + A+  + +M    ++P    +  +V  + ++G  E+   L+  L+E         W
Sbjct: 759 KFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW 818

Query: 567 KVFEKG 572
           K+   G
Sbjct: 819 KILNDG 824



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 124/487 (25%), Positives = 223/487 (45%), Gaps = 53/487 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I+  +C  GK+  A +++ +M R    P+     +L+ GL++  ++ KA  +L  M
Sbjct: 349 TYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSLMYGLVKDKKLHKAMALLTKM 408

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +P+ ITY  ++ G C      +A  L + M  +G +PD   Y  +   +   G+ 
Sbjct: 409 QKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGLKPDEHAYAVLTDALCKAGRA 468

Query: 239 KQAIGFW--------------------------------KDQLRKGCPPYLITYTILIEQ 266
           ++A  F                                 +  + +GC P   TY++L+  
Sbjct: 469 EEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAATLIERMIDEGCTPDSYTYSVLLHA 528

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           +CKQ  +  A+ +LD M++ G    I  Y  L++   ++GK+D A  + N + S G +P+
Sbjct: 529 LCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLREGKHDHAKRMYNEMTSSGHKPS 588

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           + TY   ++S    G  +  + ++  M     +P V TYNILI+G    G +DRA ++  
Sbjct: 589 ATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTYNILIDGCGHMGYIDRAFSTLK 648

Query: 387 QMVSKNCQPDIVTYNTVLGALCK-----------EGM-----LNEALQLLHLLNGSSCSP 430
           +MV  +C+P+  TY  +L  L K            GM     L+   QLL  +     +P
Sbjct: 649 RMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWNLIELDITWQLLERMVKHGLNP 708

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            + TY++LI G  K G +E+A +L   M   G+SP++  +  LI   C     E+A+  +
Sbjct: 709 TVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDIYTLLIKCCCDTKFFEKALSFV 768

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
             + + G + +  +YRL++ GLC     +    +   ++   Y  D+  +     K+ +D
Sbjct: 769 SIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLLELGYNHDEVAW-----KILND 823

Query: 551 GMTEEAY 557
           G+ +  Y
Sbjct: 824 GLLKAGY 830



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 112/446 (25%), Positives = 206/446 (46%), Gaps = 4/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +   G++ DA K+ ++M +    PD      LI GL    + E+A ++L   
Sbjct: 210 TYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD-QKTEEAEELLNNA 268

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P  +T+  ++ G C   +   A+ + ++M  S C+ D+  +  ++ ++    + 
Sbjct: 269 VKEGFTPTVVTFTNLINGYCMAEKFDDALRMKNKMMSSKCKLDLQVFGKLINSLIKKDRL 328

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A     +    G  P +ITYT +I+  CK   +  A+EVL  M  +GC P+  TYNSL
Sbjct: 329 KEAKELLNEISANGLVPNVITYTSIIDGYCKSGKVDIALEVLKMMERDGCQPNAWTYNSL 388

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    K  K   A+ ++  +   G+ PN ITY TLL        +D   ++ ++M +   
Sbjct: 389 MYGLVKDKKLHKAMALLTKMQKDGIIPNVITYTTLLQGQCDEHDFDNAFRLFEMMEQNGL 448

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P    Y +L + LCK G   RA  +++ +V K      V Y T++    K G  + A  
Sbjct: 449 KPDEHAYAVLTDALCKAG---RAEEAYSFIVRKGVALTKVYYTTLIDGFSKAGNTDFAAT 505

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L+  +    C+P   TY+ L+  L K+  + +A+ +  QM   GI      +  LI    
Sbjct: 506 LIERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEML 565

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  + + A  +  E+   G+K   + Y + I+  CK  +++ A  ++  M      PD  
Sbjct: 566 REGKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVV 625

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++ ++      G  + A+   ++++
Sbjct: 626 TYNILIDGCGHMGYIDRAFSTLKRMV 651



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 107/413 (25%), Positives = 190/413 (46%), Gaps = 19/413 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE     +    C  G+  +A   I    R+       +   LI G  +    + A+ ++
Sbjct: 451 DEHAYAVLTDALCKAGRAEEAYSFI---VRKGVALTKVYYTTLIDGFSKAGNTDFAATLI 507

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  PD+ TY++++  LCK+ ++  A+ +LD+MS+ G +  +  Y  ++  M   
Sbjct: 508 ERMIDEGCTPDSYTYSVLLHALCKQKRLNEALPILDQMSLRGIKCTIFAYTILIDEMLRE 567

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A   + +    G  P   TYT+ I   CK+  +  A +++  M  EG +PD+VTY
Sbjct: 568 GKHDHAKRMYNEMTSSGHKPSATTYTVFINSYCKEGRLEDAEDLILKMEREGVAPDVVTY 627

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL-----------HSLGSRGCWD 344
           N L++     G  D A   +  ++    EPN  TY  LL            S+ + G W+
Sbjct: 628 NILIDGCGHMGYIDRAFSTLKRMVGASCEPNYWTYCLLLKHLLKGNLAYVRSVDTSGMWN 687

Query: 345 AVD-----KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            ++     ++L+ M +   +PTV TY+ LI G CK G ++ A    + M  K   P+   
Sbjct: 688 LIELDITWQLLERMVKHGLNPTVTTYSSLIAGFCKAGRLEEACLLLDHMCGKGLSPNEDI 747

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y  ++   C      +AL  + +++     P L +Y  L+ GL  +G  EK   L+  ++
Sbjct: 748 YTLLIKCCCDTKFFEKALSFVSIMSECGFQPQLESYRLLVVGLCNEGDFEKVKSLFCDLL 807

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           E G + D++  + L  G  +A  V+    +L  + KR   + +  Y LV + +
Sbjct: 808 ELGYNHDEVAWKILNDGLLKAGYVDICFQMLSIMEKRYCCISSQTYALVTNKM 860



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 115/250 (46%), Gaps = 1/250 (0%)

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           DA+  I    S  +  +   YN  L SL      + + ++   + +    P   TYN +I
Sbjct: 16  DAIQAIRRTGSARLALSPKCYNFALRSLARFDMTEYMGRVYSQLVQDGLLPDTVTYNTMI 75

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
              CK G +  A   F  ++    +P+  T N ++   C+ G L +A  L  ++    C 
Sbjct: 76  KSYCKEGDLTTAHRYFRLLLEGGLEPETFTCNALVLGYCRTGELRKACWLFLMMPLMGCQ 135

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
               +Y  LI GL    C+ KA+VL+  M  +G SP+      LI G C++ +V +A  L
Sbjct: 136 RNEYSYTILIQGLCDAKCVRKALVLFLMMKRDGCSPNVRAFTFLISGLCKSGRVGDARLL 195

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
              + + G       Y  +I G  K  +++ A+++ ELM  +   PDD  ++T++  + D
Sbjct: 196 FDAMPQNGVVPSVMTYNAMIVGYSKLGRMNDALKIKELMEKNGCHPDDWTYNTLIYGLCD 255

Query: 550 DGMTEEAYKL 559
              TEEA +L
Sbjct: 256 QK-TEEAEEL 264


>gi|125548803|gb|EAY94625.1| hypothetical protein OsI_16402 [Oryza sativa Indica Group]
          Length = 769

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/472 (24%), Positives = 219/472 (46%), Gaps = 25/472 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T        C  G+  DA   +D++ R +   D   C ++I GL+     ++A   L
Sbjct: 243 DRFTVGCFAHALCKEGRWADA---LDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFL 299

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +  +P+ +TY  ++ G  K+ Q+     +++ M   GC P+   +N+++ +  + 
Sbjct: 300 HRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNE 359

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR------AIEVLDDMAIEGCS 289
             +  A          GCPP  + Y I I  +C Q  +        A ++  +M    C 
Sbjct: 360 KDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCV 419

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
            + V   +     C  GK+D A  +I  ++ +G  P++ TY+ ++  L      +    +
Sbjct: 420 LNKVNVANFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLL 479

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M     +P V+TY ILI+  CK GL+++A   F +M S  C P +VTY  ++ A  K
Sbjct: 480 FQEMKMVGVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLK 539

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM---------- 459
              + +A  + H +  + C P  +TY  L+DGL K G + KA  +Y +++          
Sbjct: 540 AKQVPQANDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDF 599

Query: 460 ------ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
                  + ++P+ +T+  L+ G C+A +V+ A +LL  +   G +  +  Y  +I G C
Sbjct: 600 YFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFC 659

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K+ K+D A +V   M    Y P    +++++ ++  DG  + A K+  ++++
Sbjct: 660 KAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLK 711



 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 111/334 (33%), Positives = 169/334 (50%), Gaps = 16/334 (4%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C  GK   A +LI  M R+  +PD      +I  L    ++EKA  + Q M M G  PD
Sbjct: 432 LCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPD 491

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY +++   CK G I  A  L +EM   GC P V+TY  ++       +  QA   + 
Sbjct: 492 VYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFH 551

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL----------DDMAIEGC------SP 290
             +  GC P  +TY  L++ +CK   I++A EV           D      C      +P
Sbjct: 552 RMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAP 611

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           ++VTY +LV+  CK  K D A  +++ +LS G EPN I Y+ L+      G  D+  ++ 
Sbjct: 612 NVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVF 671

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M +  + P+V TY  LI+ + K G +D A+   +QM+  +C P++VTY  ++  LC+ 
Sbjct: 672 LQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRI 731

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           G   +AL+LL L+    CSP ++TY  LIDGL +
Sbjct: 732 GESEKALKLLSLMEEKGCSPNVVTYTALIDGLGQ 765



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 107/337 (31%), Positives = 167/337 (49%), Gaps = 16/337 (4%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           N  R L  + + +KA ++++ M+  G VPDT TY+ ++  LC   ++  A  L  EM + 
Sbjct: 427 NFARCLCGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMV 486

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  PDV TY  ++ +    G  +QA   +++    GC P ++TYT LI    K   + +A
Sbjct: 487 GVTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQA 546

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG-------------- 322
            ++   M   GC P+ VTY +LV+  CK G    A  V   L+                 
Sbjct: 547 NDIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDR 606

Query: 323 --MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
             + PN +TY  L+  L      D   ++LD M  +   P    Y+ LI+G CK G +D 
Sbjct: 607 HTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDS 666

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A   F QM      P + TY +++  + K+G L+ A+++L  +   SC+P ++TY  +ID
Sbjct: 667 AQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMID 726

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           GL + G  EKA+ L   M E G SP+ +T+  LI G 
Sbjct: 727 GLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 210/465 (45%), Gaps = 31/465 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +L  F  + +L    ++I++M      P+     +L+           A K+L  M
Sbjct: 313 TYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRM 372

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRS------AIALLDEMSVSGCEPDVITYNTILRTM 232
              G  P  + YN+ +G +C + ++ S      A  +  EM  + C  + +      R +
Sbjct: 373 TTCGCPPGYVVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCL 432

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GKF +A    K+ +RKG  P   TY+ +I  +C    + +A  +  +M + G +PD+
Sbjct: 433 CGVGKFDKAFQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDV 492

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY  L++  CK G  + A  +   + S G  P  +TY  L+H+          + I   
Sbjct: 493 YTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHR 552

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN----------CQ------PD 396
           M +A   P   TY  L++GLCK G + +A   + +++  +          C+      P+
Sbjct: 553 MVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFYFPCEDRHTLAPN 612

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +VTY  ++  LCK   ++ A +LL  +  S C P  I Y+ LIDG  K G ++ A  ++ 
Sbjct: 613 VVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFL 672

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           QM + G  P   T+ +LI    +  +++ A+ +L ++ K         Y  +I GLC+  
Sbjct: 673 QMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIG 732

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           + + A+++L LM      P+   ++ ++     DG+ +     WQ
Sbjct: 733 ESEKALKLLSLMEEKGCSPNVVTYTALI-----DGLGQS----WQ 768



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 111/440 (25%), Positives = 195/440 (44%), Gaps = 9/440 (2%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G+  DA +L+  +   ++         L+R   R     +A + L  +   G  P  +TY
Sbjct: 153 GRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLKDFGYRPSKVTY 212

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N +V  L   GQ+     +  EMS SG   D  T       +   G++  A+   +   R
Sbjct: 213 NALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIE---R 269

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           +      +  T +I  + +      A+  L  M    C P++VTY +L++   K+ +   
Sbjct: 270 EDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGW 329

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
              +IN +++ G  PN   +N+L+HS  +   +    K+L+ M      P    YNI I 
Sbjct: 330 CKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIG 389

Query: 371 GLCKY------GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
            +C         L+D A   + +M++ NC  + V        LC  G  ++A QL+  + 
Sbjct: 390 SICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMM 449

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P   TY+ +I  L     +EKA +L+ +M   G++PD  T+  LI  FC+A  +E
Sbjct: 450 RKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIE 509

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +A  L +E+   G       Y  +IH   K+K+V  A  +   M+ +  +P+D  +  +V
Sbjct: 510 QAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALV 569

Query: 545 KKVADDGMTEEAYKLWQKLI 564
             +   G   +A++++ KLI
Sbjct: 570 DGLCKAGNISKAFEVYAKLI 589



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 97/389 (24%), Positives = 169/389 (43%), Gaps = 9/389 (2%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L++ L    +++   +V + M  SG   D  T       LCK G+   A+ +++      
Sbjct: 215 LVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWADALDMIEREDF-- 272

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            + D +    ++  + +   F +A+ F        C P ++TY  L+    K+  +    
Sbjct: 273 -KLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGFLKKKQLGWCK 331

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS- 336
            +++ M  EGC+P+   +NSLV+  C +  Y  A  ++N + + G  P  + YN  + S 
Sbjct: 332 RIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGYVVYNIFIGSI 391

Query: 337 -----LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
                L S    D  +KI   M  A+              LC  G  D+A     +M+ K
Sbjct: 392 CGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKAFQLIKEMMRK 451

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              PD  TY+ V+  LC    + +A  L   +     +P + TY  LID   K G +E+A
Sbjct: 452 GFVPDTSTYSKVITFLCHATKVEKAFLLFQEMKMVGVTPDVYTYTILIDSFCKAGLIEQA 511

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             L+ +M   G SP  +T+  LI  + +A QV +A D+   +   G +  +  Y  ++ G
Sbjct: 512 QWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQANDIFHRMVDAGCRPNDVTYGALVDG 571

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           LCK+  +  A +V   +I +    D   +
Sbjct: 572 LCKAGNISKAFEVYAKLIGTSDSADSDFY 600



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 82/295 (27%), Positives = 136/295 (46%), Gaps = 19/295 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T   ++ +FC  G +  A  L + M      P       LI   ++  ++ +A+
Sbjct: 488 VTPDVYTYTILIDSFCKAGLIEQAQWLFEEMRSVGCSPTVVTYTALIHAYLKAKQVPQAN 547

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   MV +G  P+ +TY  +V GLCK G I  A  +  ++  +    D   Y       
Sbjct: 548 DIFHRMVDAGCRPNDVTYGALVDGLCKAGNISKAFEVYAKLIGTSDSADSDFY------- 600

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                       +  + R    P ++TY  L++ +CK   +  A E+LD M   GC P+ 
Sbjct: 601 ------------FPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLDAMLSSGCEPNH 648

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + Y++L++  CK GK D A  V   +   G  P+  TY +L+  +   G  D   K+L  
Sbjct: 649 IVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDGRLDLAMKVLSQ 708

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           M + S +P V TY  +I+GLC+ G  ++A+   + M  K C P++VTY  ++  L
Sbjct: 709 MLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYTALIDGL 763



 Score = 73.6 bits (179), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/184 (26%), Positives = 84/184 (45%), Gaps = 1/184 (0%)

Query: 82  SHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLID 141
           S    V  KL G + +  S D   P  D   +  +  T   ++   C   K+  A +L+D
Sbjct: 579 SKAFEVYAKLIGTSDSADS-DFYFPCEDRHTLAPNVVTYGALVDGLCKAHKVDHAHELLD 637

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            M      P+      LI G  +  +I+ A +V   M   G +P   TY  ++  + K G
Sbjct: 638 AMLSSGCEPNHIVYDALIDGFCKAGKIDSAQEVFLQMTKCGYLPSVHTYTSLIDRMFKDG 697

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
           ++  A+ +L +M    C P+V+TY  ++  +   G+ ++A+        KGC P ++TYT
Sbjct: 698 RLDLAMKVLSQMLKDSCTPNVVTYTAMIDGLCRIGESEKALKLLSLMEEKGCSPNVVTYT 757

Query: 262 ILIE 265
            LI+
Sbjct: 758 ALID 761



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 68/342 (19%), Positives = 118/342 (34%), Gaps = 73/342 (21%)

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y++L +     G+  DA  ++  +     E      N L+      G W+   + L  + 
Sbjct: 142 YDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEALEELGRLK 201

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG--- 411
           +  + P+  TYN L+  L   G VD       +M       D  T      ALCKEG   
Sbjct: 202 DFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHALCKEGRWA 261

Query: 412 -----------------------------MLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                                          +EA+  LH +  +SC P ++TY TL+ G 
Sbjct: 262 DALDMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIPNVVTYRTLLSGF 321

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            KK  +     +   MM  G +P+     +L+  +C       A  LL  +   G     
Sbjct: 322 LKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLLNRMTTCGCPPGY 381

Query: 503 SAYRLVIHGLCKSKKV-----------------------------------------DMA 521
             Y + I  +C  +K+                                         D A
Sbjct: 382 VVYNIFIGSICGQEKLPSPDLLDLAEKIYGEMLAANCVLNKVNVANFARCLCGVGKFDKA 441

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Q+++ M+   + PD + +S ++  +      E+A+ L+Q++
Sbjct: 442 FQLIKEMMRKGFVPDTSTYSKVITFLCHATKVEKAFLLFQEM 483



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 48/243 (19%), Positives = 99/243 (40%), Gaps = 5/243 (2%)

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G       Y+ L  +LG  G     +++L  + E          N+L+   C+ G+ + A
Sbjct: 134 GYSHTGACYDALADALGFDGRARDAERLLREIGEEDREVLGRLLNVLVRRCCRGGMWNEA 193

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +    ++     +P  VTYN ++  L   G ++   ++   ++ S       T       
Sbjct: 194 LEELGRLKDFGYRPSKVTYNALVQVLSSAGQVDLGFRVQKEMSESGFCMDRFTVGCFAHA 253

Query: 442 LAKKGCMEKAMVLYGQMME-NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           L K+G    A+     M+E      D +    +I G   A   +EA+  L  +       
Sbjct: 254 LCKEGRWADAL----DMIEREDFKLDTVLCTHMISGLMEASYFDEAMSFLHRMRCNSCIP 309

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               YR ++ G  K K++    +++ +M++    P+ ++F+++V    ++     AYKL 
Sbjct: 310 NVVTYRTLLSGFLKKKQLGWCKRIINMMMTEGCNPNPSLFNSLVHSYCNEKDYAYAYKLL 369

Query: 561 QKL 563
            ++
Sbjct: 370 NRM 372


>gi|297809453|ref|XP_002872610.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297318447|gb|EFH48869.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 575

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 115/397 (28%), Positives = 197/397 (49%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+G      IEK+  +L  +   G  P+ + Y  ++ G CK+G+I  A  L  EM   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              +  TY  ++  +F NG  KQ    ++     G  P L TY  ++ Q+CK      A 
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAF 288

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +V D+M   G S +IVTYN+L+   C++ K ++A  V++ + S  + PN ITYNTL+   
Sbjct: 289 KVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGF 348

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
            S G       +   +     SP++ TYN+L++G C+ G    A     +M  +  +P  
Sbjct: 349 CSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTY  ++    +   +  A+QL   +      P + TY+ LI G   KG M +A  L+  
Sbjct: 409 VTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+E  + P+++ + T+I G+C+      A+ L +++ ++      ++Y  +I  LCK +K
Sbjct: 469 MVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERK 528

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           +  A  ++E MI S   P DT+ + I +   D  + +
Sbjct: 529 LKEAEDLVEKMIDSGIDPSDTICNLISRAKTDSPVAQ 565



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 109/382 (28%), Positives = 191/382 (50%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           V D  ++ +++ G C+ G+I  +  LL E+   G  P+V+ Y T++      G+ ++A  
Sbjct: 160 VLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKD 219

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            + +  + G      TYT+LI  + K     +  E+ + M   G  P++ TYN ++N  C
Sbjct: 220 LFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLC 279

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K G+  DA  V + +  RG+  N +TYNTL+  L      +  +K++D M     +P + 
Sbjct: 280 KDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLI 339

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TYN LI+G C  G + +A++    + S+   P +VTYN ++   C++G  + A +++  +
Sbjct: 340 TYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEM 399

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P  +TY  LID  A+   ME A+ L   M E G+ PD  T+  LI GFC   Q+
Sbjct: 400 EERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQM 459

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            EA  L K + ++  +     Y  +I G CK      A+++   M      P+   +S +
Sbjct: 460 NEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYL 519

Query: 544 VKKVADDGMTEEAYKLWQKLIE 565
           ++ +  +   +EA  L +K+I+
Sbjct: 520 IRVLCKERKLKEAEDLVEKMID 541



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 189/376 (50%), Gaps = 1/376 (0%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++    +   + S+I   +EM   G  P    +N +L  +  +  F Q   F+ +  
Sbjct: 97  YEVIINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWCFFNESK 156

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            K     + ++ I+I+  C+   I ++ ++L ++   G SP++V Y +L++  CK+G+ +
Sbjct: 157 IKVVLD-VYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIE 215

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A  +   +   G+  N  TY  L+H L   G      ++ + M E    P ++TYN ++
Sbjct: 216 KAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVM 275

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           N LCK G    A   F++M  +    +IVTYNT++G LC+E   NEA +++  +     +
Sbjct: 276 NQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVIN 335

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P LITYNTLIDG    G + KA+ L   +   G+SP  +T+  L+ GFCR      A  +
Sbjct: 336 PNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKM 395

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           +KE+ +RG K     Y ++I    +S  ++ AIQ+   M      PD   +S ++     
Sbjct: 396 VKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCI 455

Query: 550 DGMTEEAYKLWQKLIE 565
            G   EA +L++ ++E
Sbjct: 456 KGQMNEASRLFKSMVE 471



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 101/375 (26%), Positives = 187/375 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C  G++  +  L+  +      P+      LI G  +   IEKA  +   M   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEKAKDLFFEMGKFG 228

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V +  TY +++ GL K G  +    + ++M   G  P++ TYN ++  +  +G+ K A 
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAF 288

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   +G    ++TY  LI  +C++     A +V+D M     +P+++TYN+L++  
Sbjct: 289 KVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGF 348

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  GK   A+ +  +L SRG+ P+ +TYN L+     +G      K++  M E    P+ 
Sbjct: 349 CSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSK 408

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY ILI+   +   ++ AI   + M      PD+ TY+ ++   C +G +NEA +L   
Sbjct: 409 VTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKS 468

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  + YNT+I G  K+G   +A+ L+  M E  ++P+  ++  LI   C+  +
Sbjct: 469 MVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERK 528

Query: 483 VEEAVDLLKEIGKRG 497
           ++EA DL++++   G
Sbjct: 529 LKEAEDLVEKMIDSG 543



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 99/340 (29%), Positives = 169/340 (49%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C +G++  A  L   M +   + +      LI GL +    ++  ++ + M   G  P+ 
Sbjct: 209 CKKGEIEKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNL 268

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            TYN ++  LCK G+ + A  + DEM   G   +++TYNT++  +    K  +A      
Sbjct: 269 YTYNCVMNQLCKDGRTKDAFKVFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQ 328

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
                  P LITY  LI+  C    + +A+ +  D+   G SP +VTYN LV+  C++G 
Sbjct: 329 MKSYVINPNLITYNTLIDGFCSVGKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGD 388

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
              A  ++  +  RG++P+ +TY  L+ +       +   ++   M E    P V TY++
Sbjct: 389 TSGAAKMVKEMEERGIKPSKVTYTILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSV 448

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LI+G C  G ++ A   F  MV K  +P+ V YNT++   CKEG    AL+L   +    
Sbjct: 449 LIHGFCIKGQMNEASRLFKSMVEKMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKE 508

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            +P + +Y+ LI  L K+  +++A  L  +M+++GI P D
Sbjct: 509 LAPNVASYSYLIRVLCKERKLKEAEDLVEKMIDSGIDPSD 548



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 82/315 (26%), Positives = 148/315 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T   ++      G      ++ + M      P+ +    ++  L +  R + A KV 
Sbjct: 232 NEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMNQLCKDGRTKDAFKVF 291

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G   + +TYN ++GGLC+  +   A  ++D+M      P++ITYNT++      
Sbjct: 292 DEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSYVINPNLITYNTLIDGFCSV 351

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A+   +D   +G  P L+TY +L+   C++   + A +++ +M   G  P  VTY
Sbjct: 352 GKLGKALSLCRDLKSRGLSPSLVTYNVLVSGFCRKGDTSGAAKMVKEMEERGIKPSKVTY 411

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L++   +    + A+ + +++   G+ P+  TY+ L+H    +G  +   ++   M E
Sbjct: 412 TILIDTFARSDNMETAIQLRSSMEELGLVPDVHTYSVLIHGFCIKGQMNEASRLFKSMVE 471

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P    YN +I G CK G   RA+  F  M  K   P++ +Y+ ++  LCKE  L E
Sbjct: 472 KMLEPNEVIYNTMILGYCKEGSSYRALRLFRDMEEKELAPNVASYSYLIRVLCKERKLKE 531

Query: 416 ALQLLHLLNGSSCSP 430
           A  L+  +  S   P
Sbjct: 532 AEDLVEKMIDSGIDP 546



 Score = 86.3 bits (212), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 68/263 (25%), Positives = 122/263 (46%), Gaps = 20/263 (7%)

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           Y  A  ++  ++S  ++    T ++LLH L                +E S + +   Y +
Sbjct: 55  YSHAQSLLLQVISGKIQSQFFTSSSLLHYLTE--------------SETSKTKSRL-YEV 99

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +IN   +   +D +I  FN+MV K   P    +N +L  +      N   Q     N S 
Sbjct: 100 IINAYVQSQSLDSSIYYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFN---QWWCFFNESK 156

Query: 428 CSPCLITYN--TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               L  Y+   +I G  + G +EK+  L  ++ E G SP+ + + TLI G C+  ++E+
Sbjct: 157 IKVVLDVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKKGEIEK 216

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A DL  E+GK G       Y ++IHGL K+       ++ E M      P+   ++ ++ 
Sbjct: 217 AKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEHGVFPNLYTYNCVMN 276

Query: 546 KVADDGMTEEAYKLWQKLIEWKV 568
           ++  DG T++A+K++ ++ E  V
Sbjct: 277 QLCKDGRTKDAFKVFDEMRERGV 299


>gi|359491317|ref|XP_003634263.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Vitis vinifera]
          Length = 665

 Score =  195 bits (496), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 119/435 (27%), Positives = 207/435 (47%), Gaps = 13/435 (2%)

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           +  + + +P    C  ++ GL++  R +   KV   MV  G  P+ +TY  ++ G C++G
Sbjct: 148 VYYKMDVLPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQG 207

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
               A  L DEM      P V+ Y  ++R +    +  +A   ++     G  P L TY 
Sbjct: 208 DFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYN 267

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
            +++  CK   + +A+E+  +M  +G  P++VT+  L++  CK  +   A   + ++ S 
Sbjct: 268 TMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASF 327

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G+ PN   YN L+      G       +   + +    P VFTY+ILI GLC    ++ A
Sbjct: 328 GVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEA 387

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
                +M  K   P+ VTYNT++   CKEG + +A+++   +      P +IT++TLIDG
Sbjct: 388 DGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDG 447

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K G ME AM LY +M+  G+ PD + +  LI G  +    +EA  L KE+ + G    
Sbjct: 448 YCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPN 507

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVL-------------ELMISSRYKPDDTVFSTIVKKVA 548
                 +I GLCK  ++  AI++                +  S   P+  +++ +++ + 
Sbjct: 508 VFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLC 567

Query: 549 DDGMTEEAYKLWQKL 563
            DG   +A K +  +
Sbjct: 568 TDGRIFKASKFFSDM 582



 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 125/437 (28%), Positives = 208/437 (47%), Gaps = 15/437 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L     +G+     K+   M  R   P+      LI G  R     KA ++   M+ 
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P  + Y +++ GLC   +I  A ++   M  SG  P++ TYNT++         K+
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +++ L  G  P ++T+ ILI+ +CK   +  A + L DMA  G  P+I  YN L++
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G   +A+ + + +    + P+  TY+ L+  L      +  D +L  M +    P
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN LI+G CK G +++AI   +QM  K  +P+I+T++T++   CK G +  A+ L 
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++ Y  LIDG  K G  ++A  L+ +M E G+ P+  T   LI G C+ 
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 481 DQVEEAVDLL------KEIGKRGNKMRNS-------AYRLVIHGLCKSKKVDMAIQVLEL 527
            ++ +A+ L          G + N++  S        Y  +I GLC   ++  A +    
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLCSPNHVMYTALIQGLCTDGRIFKASKFFSD 581

Query: 528 MISSRYKPDDTVFSTIV 544
           M  S  +PD  VF+ IV
Sbjct: 582 MRCSGLRPD--VFTCIV 596



 Score =  174 bits (442), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 113/460 (24%), Positives = 210/460 (45%), Gaps = 17/460 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C +G    A +L D M  +   P       LIRGL    RI +A  + + M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG +P+  TYN M+ G CK   ++ A+ L  EM   G  P+V+T+  ++  +    + 
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F  D    G  P +  Y  LI+  CK   ++ A+ +  ++      PD+ TY+ L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C   + ++A  ++  +  +G  PN++TYNTL+      G  +   ++   M E   
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + T++ LI+G CK G ++ A+  + +MV K   PD+V Y  ++    K+G   EA +
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY-------------GQMMENGISP 465
           L   +  +   P + T + LIDGL K G +  A+ L+              ++  +  SP
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLFLAKTGTDTTGSKTNELDRSLCSP 554

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR--LVIHGLCKSKKVDMAIQ 523
           + + +  LI G C   ++ +A     ++  R + +R   +   ++I G  ++  +   + 
Sbjct: 555 NHVMYTALIQGLCTDGRIFKASKFFSDM--RCSGLRPDVFTCIVIIQGHFRAMHLRDVMM 612

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +   ++     P+ +V+  + K   + G  + A +  + L
Sbjct: 613 LQADILKMGIIPNSSVYRVLAKGYEESGYLKSALRCSEDL 652



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/381 (27%), Positives = 187/381 (49%), Gaps = 11/381 (2%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
            + +++    + G +  A+ +  +M V    P +   N +L  +   G+F      + D 
Sbjct: 128 VFGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDM 184

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           + +G  P ++TY  LI+  C+Q    +A  + D+M  +   P +V Y  L+   C + + 
Sbjct: 185 VARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRI 244

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDKILDIMNEASHS---PTVFT 364
            +A  +   + + GM PN  TYNT++       C  A V K L++  E       P V T
Sbjct: 245 SEAESMFRTMRNSGMLPNLYTYNTMMDGY----CKIAHVKKALELYQEMLGDGLLPNVVT 300

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           + ILI+GLCK   +  A      M S    P+I  YN ++   CK G L+EAL L   + 
Sbjct: 301 FGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIE 360

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P + TY+ LI GL     ME+A  L  +M + G  P+ +T+ TLI G+C+   +E
Sbjct: 361 KHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNME 420

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +A+++  ++ ++G +     +  +I G CK+ K++ A+ +   M+     PD   ++ ++
Sbjct: 421 KAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALI 480

Query: 545 KKVADDGMTEEAYKLWQKLIE 565
                DG T+EA++L +++ E
Sbjct: 481 DGHFKDGNTKEAFRLHKEMQE 501



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 53/221 (23%), Positives = 96/221 (43%), Gaps = 22/221 (9%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T + ++  +C  GK+  A  L   M  +  +PD      LI G  +    ++A 
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + M  +G  P+  T + ++ GLCK G+I  AI L   ++ +G +      N + R++
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF--LAKTGTDTTGSKTNELDRSL 551

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                               C P  + YT LI+ +C    I +A +   DM   G  PD+
Sbjct: 552 --------------------CSPNHVMYTALIQGLCTDGRIFKASKFFSDMRCSGLRPDV 591

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            T   ++    +     D +++  ++L  G+ PNS  Y  L
Sbjct: 592 FTCIVIIQGHFRAMHLRDVMMLQADILKMGIIPNSSVYRVL 632



 Score = 40.8 bits (94), Expect = 2.2,   Method: Compositional matrix adjust.
 Identities = 23/95 (24%), Positives = 46/95 (48%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++Q  C+ G++  ASK    M      PD   CI +I+G  R   +     +   ++  G
Sbjct: 562 LIQGLCTDGRIFKASKFFSDMRCSGLRPDVFTCIVIIQGHFRAMHLRDVMMLQADILKMG 621

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
            +P++  Y ++  G  + G ++SA+   +++S  G
Sbjct: 622 IIPNSSVYRVLAKGYEESGYLKSALRCSEDLSGIG 656


>gi|297793055|ref|XP_002864412.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297310247|gb|EFH40671.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1245

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 130/482 (26%), Positives = 215/482 (44%), Gaps = 36/482 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++    S G   +A K+  +M  +  I        L+ GL +    + A      M
Sbjct: 335 TFNALIDGHISEGNFKEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRM 394

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G     ITY  M+ GLCK G +  A+ +L+EMS  G +PD++TY+ ++      G+ 
Sbjct: 395 KRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRL 454

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K A        R G  P  I Y+ LI   C+   +   I + + M +EG +PD  T+N L
Sbjct: 455 KTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVL 514

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V   CK GK  +A   +  + S G+ PN+++++ L++  GS G       + D M +  H
Sbjct: 515 VTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGH 574

Query: 359 SPTVFTY-----------------------------------NILINGLCKYGLVDRAIN 383
            PT FTY                                   N LI  +CK G +D+A++
Sbjct: 575 HPTFFTYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVS 634

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG-SSCSPCLITYNTLIDGL 442
            F +MV ++  PD  TY +++  LC++G    A+          +  P  + Y   +DG+
Sbjct: 635 LFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGM 694

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K G  +       QM + G++ D +T   +I G+ R  ++E+  DLL E+G +      
Sbjct: 695 FKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNL 754

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           + Y +++HG  K K V  +  +   MI S   PD     +I+  + +  M E   K+ + 
Sbjct: 755 TTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSIILGICESNMLEIGLKILKA 814

Query: 563 LI 564
            I
Sbjct: 815 FI 816



 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/443 (25%), Positives = 217/443 (48%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +   G + D+ ++  +M      P  + C  ++  +++          L+ M+   
Sbjct: 129 LIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEMLKRK 188

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  T+N+++  LC  G  + +  L+ +M  SG  P ++TYNT+L      G+FK AI
Sbjct: 189 ICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFKAAI 248

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG    + TY +LI  +C+    A+   +L DM      P+ VTYN+L+N  
Sbjct: 249 ELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLLNGF 308

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
             +GK   A  ++N +L+ G+ PN +T+N L+    S G +    K+  +M       T 
Sbjct: 309 SNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLIGTE 368

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            +Y +L++GLCK    D A   + +M         +TY  ++  LCK G L+EA+ +L+ 
Sbjct: 369 VSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVMLNE 428

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++     P ++TY+ LI+G  + G ++ A  +  ++   G+SP+ I + TLI+  CR   
Sbjct: 429 MSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCRMGC 488

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++E + + + +   GN   +  + +++  LCK+ KV  A + +  M S    P+   F  
Sbjct: 489 LKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNAVSFDC 548

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++      G   +A+ ++ ++ +
Sbjct: 549 LINGYGSSGEGLKAFSVFDEMTK 571



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 129/468 (27%), Positives = 209/468 (44%), Gaps = 71/468 (15%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L  +C +G+   A +L+D M  +    D      LI  L R +R  K   +L+ M
Sbjct: 230 TYNTVLHWYCKKGRFKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDM 289

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+ +TYN ++ G    G++  A  LL+EM   G  P+ +T+N ++      G F
Sbjct: 290 RKRMIHPNEVTYNTLLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNF 349

Query: 239 KQAI-----------------------------------GFWKDQLRKGCPPYLITYTIL 263
           K+A+                                   GF+    R G     ITYT +
Sbjct: 350 KEALKMFHMMEAKGLIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGM 409

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+ +CK   +  A+ +L++M+ +G  PDIVTY++L+N  C+ G+   A  ++  +   G+
Sbjct: 410 IDGLCKNGFLDEAVVMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGL 469

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD---- 379
            PN I Y+TL+++    GC     +I + M    ++P  FT+N+L+  LCK G V     
Sbjct: 470 SPNGIIYSTLIYNCCRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEE 529

Query: 380 -------------------------------RAINSFNQMVSKNCQPDIVTYNTVLGALC 408
                                          +A + F++M      P   TY ++L  LC
Sbjct: 530 FMRCMTSDGILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLC 589

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G L  A + L  L     +   +  NTLI  + K G ++KA+ L+G+M++  I PD  
Sbjct: 590 KGGHLIAAEKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSF 649

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKS 515
           T+ +LI G CR  +   A+   KE   RGN + N   Y   + G+ K+
Sbjct: 650 TYTSLISGLCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKA 697



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 203/421 (48%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M +R   PD      LI  L      +K+S ++Q M  SG  P  +TYN ++   CK+G+
Sbjct: 184 MLKRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGR 243

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
            ++AI LLD M++ G   DV TYN ++  +  + +  +     +D  ++   P  +TY  
Sbjct: 244 FKAAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNT 303

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L+     +  +  A ++L++M   G SP+ VT+N+L++    +G + +A+ + + + ++G
Sbjct: 304 LLNGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKG 363

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +    ++Y  LL  L     +D        M          TY  +I+GLCK G +D A+
Sbjct: 364 LIGTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAV 423

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
              N+M      PDIVTY+ ++   C+ G L  A +++  +     SP  I Y+TLI   
Sbjct: 424 VMLNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNC 483

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            + GC+++ + +Y  M+  G +PD  T   L+   C+A +V EA + ++ +   G     
Sbjct: 484 CRMGCLKETIRIYEAMILEGNTPDHFTFNVLVTSLCKAGKVAEAEEFMRCMTSDGILPNA 543

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            ++  +I+G   S +   A  V + M    + P    + +++K +   G    A K  + 
Sbjct: 544 VSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAAEKFLKS 603

Query: 563 L 563
           L
Sbjct: 604 L 604



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/375 (25%), Positives = 188/375 (50%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           +++++    + G I+ ++ +   M + G  P V T N IL ++  + +      F K+ L
Sbjct: 126 FDILIRVYLREGMIQDSLEIFRLMGLYGFNPSVYTCNAILGSIVKSCEDVSVWSFLKEML 185

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           ++   P + T+ ILI  +C +    ++  ++  M   G +P IVTYN+++++ CK+G++ 
Sbjct: 186 KRKICPDVATFNILINVLCAEGSFKKSSYLMQKMEKSGYAPTIVTYNTVLHWYCKKGRFK 245

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A+ +++++  +G+  +  TYN L+H L           +L  M +    P   TYN L+
Sbjct: 246 AAIELLDHMNLKGVNADVCTYNMLIHDLCRSNRSAKGYLLLRDMRKRMIHPNEVTYNTLL 305

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           NG    G V  A    N+M++    P+ VT+N ++     EG   EAL++ H++      
Sbjct: 306 NGFSNEGKVLIARQLLNEMLTFGLSPNHVTFNALIDGHISEGNFKEALKMFHMMEAKGLI 365

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
              ++Y  L+DGL K    + A   Y +M  NG+    IT+  +I G C+   ++EAV +
Sbjct: 366 GTEVSYGVLLDGLCKNAEFDLARGFYMRMKRNGVCVGRITYTGMIDGLCKNGFLDEAVVM 425

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L E+ K G       Y  +I+G C+  ++  A +++  +      P+  ++ST++     
Sbjct: 426 LNEMSKDGIDPDIVTYSALINGFCRVGRLKTAKEIVCRIYRVGLSPNGIIYSTLIYNCCR 485

Query: 550 DGMTEEAYKLWQKLI 564
            G  +E  ++++ +I
Sbjct: 486 MGCLKETIRIYEAMI 500



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 110/483 (22%), Positives = 211/483 (43%), Gaps = 38/483 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMS 181
           ++ N C  G L +  ++ + M      PD HF  N L+  L +  ++ +A + ++ M   
Sbjct: 479 LIYNCCRMGCLKETIRIYEAMILEGNTPD-HFTFNVLVTSLCKAGKVAEAEEFMRCMTSD 537

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G +P+ ++++ ++ G    G+   A ++ DEM+  G  P   TY ++L+ +   G    A
Sbjct: 538 GILPNAVSFDCLINGYGSSGEGLKAFSVFDEMTKVGHHPTFFTYGSLLKGLCKGGHLIAA 597

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
             F K           +    LI  +CK   + +A+ +  +M      PD  TY SL++ 
Sbjct: 598 EKFLKSLQNVPAAVDTVMCNTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISG 657

Query: 302 SCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
            C++GK   A+L      +RG + PN + Y   +  +   G W A       M++   + 
Sbjct: 658 LCRKGKTVIAILFAKEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTR 717

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V T N +I+G  + G +++  +   +M ++N  P++ TYN +L    K   ++ +  L 
Sbjct: 718 DVVTTNAMIDGYSRMGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLY 777

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI------ 474
             +  S   P  +T  ++I G+ +   +E  + +    +  G+  D  T   LI      
Sbjct: 778 RSMILSGILPDKLTCYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCAN 837

Query: 475 ----WGF-----------------C--------RADQVEEAVDLLKEIGKRGNKMRNSAY 505
               W F                 C        R  + +E+  +L E+ K+G    +  Y
Sbjct: 838 GEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKY 897

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +++GLC+   +  A  V E MI+ +  P +   S +V+ +A  G  +EA  L + +++
Sbjct: 898 IGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLK 957

Query: 566 WKV 568
            K+
Sbjct: 958 MKL 960



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 100/469 (21%), Positives = 208/469 (44%), Gaps = 13/469 (2%)

Query: 96   ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
            +TK  H P+              T   +L+  C  G L  A K +  +       D   C
Sbjct: 569  MTKVGHHPTFF------------TYGSLLKGLCKGGHLIAAEKFLKSLQNVPAAVDTVMC 616

Query: 156  INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
              LI  + +   ++KA  +   MV    +PD+ TY  ++ GLC++G+   AI    E   
Sbjct: 617  NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCRKGKTVIAILFAKEAEA 676

Query: 216  SG-CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G   P+ + Y   +  MF  G++K    F +   + G    ++T   +I+   +   I 
Sbjct: 677  RGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSRMGKIE 736

Query: 275  RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            +  ++L +M  +   P++ TYN L++   K+     + ++  +++  G+ P+ +T  +++
Sbjct: 737  KTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLTCYSII 796

Query: 335  HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
              +      +   KIL             T+N+LI+  C  G ++ A +  N M S    
Sbjct: 797  LGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGIS 856

Query: 395  PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
             D  T + ++  L +     E+  +LH ++    SP    Y  L++GL + G ++ A V+
Sbjct: 857  LDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVV 916

Query: 455  YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              +M+ + I P ++    ++    +  + +EA  LL+ + K       +++  ++H  CK
Sbjct: 917  KEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCK 976

Query: 515  SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +  V  A+++  +M +   K D   ++ ++  +   G    A++L++++
Sbjct: 977  NGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEM 1025



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 97/437 (22%), Positives = 188/437 (43%), Gaps = 11/437 (2%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++   C  G L  A  L   M +R+ +PD     +LI GL R     K   V+ I+  
Sbjct: 617  NTLITAMCKSGNLDKAVSLFGEMVQRSILPDSFTYTSLISGLCR-----KGKTVIAILFA 671

Query: 181  SGG------VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
                     VP+ + Y   V G+ K GQ ++      +M   G   DV+T N ++     
Sbjct: 672  KEAEARGNLVPNKVMYTCFVDGMFKAGQWKAGFYFRQQMDKLGLTRDVVTTNAMIDGYSR 731

Query: 235  NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             GK ++      +   +   P L TY IL+    K+  ++ +  +   M + G  PD +T
Sbjct: 732  MGKIEKTHDLLFEMGNQNQGPNLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLT 791

Query: 295  YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
              S++   C+    +  + ++   + RG+E +  T+N L+    + G  +    ++++M 
Sbjct: 792  CYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMT 851

Query: 355  EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                S    T + +++ L +      +    ++M  +   P+   Y  +L  LC+ G + 
Sbjct: 852  SLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIK 911

Query: 415  EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
             A  +   +      P  +  + ++  LAK G  ++A +L   M++  + P   +  TL+
Sbjct: 912  TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLM 971

Query: 475  WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              FC+   V EA++L   +   G K+   +Y ++I GLC    + +A ++ E M    + 
Sbjct: 972  HLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFL 1031

Query: 535  PDDTVFSTIVKKVADDG 551
             + T +  +V  +   G
Sbjct: 1032 ANVTTYKALVGGILSQG 1048



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/317 (23%), Positives = 143/317 (45%), Gaps = 7/317 (2%)

Query: 98   KKSHDPSLP---SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHF 154
            +K+HD        + GP    +  T N +L  +  R  ++ +  L   M     +PD   
Sbjct: 736  EKTHDLLFEMGNQNQGP----NLTTYNILLHGYSKRKHVSTSFMLYRSMILSGILPDKLT 791

Query: 155  CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
            C ++I G+   + +E   K+L+  +  G   D  T+NM++   C  G+I  A  +++ M+
Sbjct: 792  CYSIILGICESNMLEIGLKILKAFICRGVEVDRHTFNMLISKCCANGEINWAFDMVNVMT 851

Query: 215  VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
              G   D  T + I+  +  N +F+++     +  ++G  P    Y  L+  +C+   I 
Sbjct: 852  SLGISLDKNTCDAIVSVLNRNHRFQESRMVLHEMSKQGISPESRKYIGLLNGLCRVGDIK 911

Query: 275  RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
             A  V ++M      P  V  +++V    K GK D+A L++ ++L   + P   ++ TL+
Sbjct: 912  TAFVVKEEMIAHKICPPNVAESAMVRALAKCGKADEASLLLRSMLKMKLVPTIASFTTLM 971

Query: 335  HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            H     G      ++  +M+       + +YN+LI GLC  G +  A   F +M      
Sbjct: 972  HLFCKNGNVTEALELRVVMSNCGLKLDLVSYNVLITGLCAKGDMAIAFELFEEMKRDGFL 1031

Query: 395  PDIVTYNTVLGALCKEG 411
             ++ TY  ++G +  +G
Sbjct: 1032 ANVTTYKALVGGILSQG 1048



 Score = 90.1 bits (222), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 67/260 (25%), Positives = 122/260 (46%), Gaps = 4/260 (1%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            VE D  T N ++   C+ G++  A  ++++M       D + C  ++  L R  R +++ 
Sbjct: 820  VEVDRHTFNMLISKCCANGEINWAFDMVNVMTSLGISLDKNTCDAIVSVLNRNHRFQESR 879

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             VL  M   G  P++  Y  ++ GLC+ G I++A  + +EM      P  +  + ++R +
Sbjct: 880  MVLHEMSKQGISPESRKYIGLLNGLCRVGDIKTAFVVKEEMIAHKICPPNVAESAMVRAL 939

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               GK  +A    +  L+    P + ++T L+   CK   +  A+E+   M+  G   D+
Sbjct: 940  AKCGKADEASLLLRSMLKMKLVPTIASFTTLMHLFCKNGNVTEALELRVVMSNCGLKLDL 999

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC-WDAVDKIL- 350
            V+YN L+   C +G    A  +   +   G   N  TY  L+  + S+G  +   D IL 
Sbjct: 1000 VSYNVLITGLCAKGDMAIAFELFEEMKRDGFLANVTTYKALVGGILSQGTEFSGTDIILK 1059

Query: 351  DIMNEASHSPTVFTYNILIN 370
            D++  A    T  ++N +IN
Sbjct: 1060 DLL--ARGFITAMSFNHMIN 1077


>gi|414882130|tpg|DAA59261.1| TPA: hypothetical protein ZEAMMB73_845952 [Zea mays]
          Length = 1603

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 129/430 (30%), Positives = 213/430 (49%), Gaps = 7/430 (1%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N ++     +G L +A++L++ M    +   F +   LI GL+    ++K   +   M
Sbjct: 1158 TYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYN-PLITGLLARGCVKKVYDLQLEM 1216

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
               G +P  +TYN M+ GL + G + +A     EM   G  PDVITYN++L      G  
Sbjct: 1217 ENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNL 1276

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            K+A+  + D  R G  P ++TY ILI+  C+   +  A  + ++M  +GC P++ TY  L
Sbjct: 1277 KEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTIL 1336

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS---LGSRGCWDAVDKILDIMNE 355
            +  S        A    + +LS+G++P+   YNT + +   LG       + ++L  M E
Sbjct: 1337 MKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVL--MLE 1394

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               S TV TYNILI+GLCK G +  A     +MVS   QPD +TY  ++ A C+ G+L E
Sbjct: 1395 GISSDTV-TYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLRE 1453

Query: 416  ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            A ++ + +      P  +T+  +I    ++G +  A   + +M+E G+ P++IT+  LI 
Sbjct: 1454 ARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIH 1513

Query: 476  GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
              CR  + + A     E+ +RG       Y L+I G CK    + A++    M  +   P
Sbjct: 1514 ALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHP 1573

Query: 536  DDTVFSTIVK 545
            D      ++K
Sbjct: 1574 DYLTHKALLK 1583



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 173/359 (48%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N ++      G +  A      M     +PD     +L+ G  +   +++A  +   +
Sbjct: 1227 TYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDL 1286

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              +G  P  +TYN+++ G C+ G +  A  L +EM   GC P+V TY  +++   +    
Sbjct: 1287 RRAGLAPTVLTYNILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSL 1346

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
              A  F+ + L KG  P    Y   I        IARA E+ + + +EG S D VTYN L
Sbjct: 1347 AMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNIL 1406

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            ++  CK G   DA  +   ++S G++P+ ITY  L+H+   RG      KI + M     
Sbjct: 1407 IHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGL 1466

Query: 359  SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
             P+  T+ ++I+  C+ G +  A   F +M+ +  +P+ +TYN ++ ALC+ G    A  
Sbjct: 1467 LPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASH 1526

Query: 419  LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
              H +          TY  LIDG  K G  E AM  Y +M +NGI PD +TH+ L+ GF
Sbjct: 1527 HFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALLKGF 1585



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 218/462 (47%), Gaps = 17/462 (3%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI------PDFHFCINLIRGLIRID 166
            V  D K  N++L+       L DA++  DI A   ++      P       L+   ++  
Sbjct: 1080 VAPDVKDCNRVLR------VLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDSFLKEG 1133

Query: 167  RIEKASKVLQIMVM--SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
            R +K + +L+ M    SG +P+ +TYN+++ GL ++G +  A  L++ M +S  +    T
Sbjct: 1134 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSFT 1192

Query: 225  YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV-LDDM 283
            YN ++  +   G  K+      +   +G  P ++TY  +I  +  Q G+  A +V   +M
Sbjct: 1193 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLL-QSGLVEAAQVKFAEM 1251

Query: 284  AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
               G  PD++TYNSL+N  CK G   +A+L+  +L   G+ P  +TYN L+      G  
Sbjct: 1252 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 1311

Query: 344  DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
            +    + + M E    P V TY IL+ G      +  A   F++M+SK  QPD   YNT 
Sbjct: 1312 EEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQPDCFAYNTR 1371

Query: 404  LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
            + A    G +  A +L  +L     S   +TYN LI GL K G ++ A  L  +M+ NG+
Sbjct: 1372 ICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGL 1431

Query: 464  SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
             PD IT+  LI   C    + EA  +   +   G       + ++IH  C+   +  A  
Sbjct: 1432 QPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYG 1491

Query: 524  VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                M+    +P++  ++ ++  +   G T+ A   + +++E
Sbjct: 1492 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLE 1533



 Score =  165 bits (417), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 111/399 (27%), Positives = 191/399 (47%), Gaps = 46/399 (11%)

Query: 207  IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
            ++   EM+  G  PDV   N +LR + D  ++       ++ L  G  P ++TY  L++ 
Sbjct: 1069 LSAFREMASHGVAPDVKDCNRVLRVLRDAARWDDICAVHEEMLELGIEPSIVTYNTLLDS 1128

Query: 267  VCKQCGIARAIEVLDDMAIE--GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL-LSRGM 323
              K+    +   +L +M     GC P+ VTYN ++    ++G  ++A  ++  + LS+  
Sbjct: 1129 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-- 1186

Query: 324  EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDR 380
            + +S TYN L+  L +RGC   V K+ D+  E  +    PTV TYN +I+GL + GLV+ 
Sbjct: 1187 KASSFTYNPLITGLLARGC---VKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEA 1243

Query: 381  AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
            A   F +M +    PD++TYN++L   CK G L EAL L   L  +  +P ++TYN LID
Sbjct: 1244 AQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNILID 1303

Query: 441  GLAKKGCMEKAMVL-----------------------------------YGQMMENGISP 465
            G  + G +E+A +L                                   + +M+  G+ P
Sbjct: 1304 GYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMAREFFDEMLSKGLQP 1363

Query: 466  DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
            D   + T I        +  A +L + +   G       Y ++IHGLCK+  +  A ++ 
Sbjct: 1364 DCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQ 1423

Query: 526  ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              M+S+  +PD   ++ ++    + G+  EA K++  +I
Sbjct: 1424 MKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMI 1462



 Score =  162 bits (410), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 206/448 (45%), Gaps = 5/448 (1%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQ--IPDFHFCINLIRGLIRIDRIEKASKVLQ 176
            T N +L +F   G+    + L+  M  R    +P+      +I GL R   +E+A+++++
Sbjct: 1121 TYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVE 1180

Query: 177  IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
             M +S     + TYN ++ GL  RG ++    L  EM   G  P V+TYN ++  +  +G
Sbjct: 1181 GMRLSKKA-SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSG 1239

Query: 237  KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
              + A   + +    G  P +ITY  L+   CK   +  A+ +  D+   G +P ++TYN
Sbjct: 1240 LVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYN 1299

Query: 297  SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH-SLGSRGCWDAVDKILDIMNE 355
             L++  C+ G  ++A ++   +  +G  PN  TY  L+  SL  R    A +   D M  
Sbjct: 1300 ILIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVRSLAMARE-FFDEMLS 1358

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                P  F YN  I      G + RA      ++ +    D VTYN ++  LCK G L +
Sbjct: 1359 KGLQPDCFAYNTRICAELILGDIARAFELREVLMLEGISSDTVTYNILIHGLCKTGNLKD 1418

Query: 416  ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            A +L   +  +   P  ITY  LI    ++G + +A  ++  M+ +G+ P  +T   +I 
Sbjct: 1419 AKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIH 1478

Query: 476  GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
             +CR   +  A    +++ + G +     Y ++IH LC+  +  +A      M+      
Sbjct: 1479 AYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLERGLVA 1538

Query: 536  DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +   ++ ++      G  E+A + + ++
Sbjct: 1539 NKYTYTLLIDGNCKVGNWEDAMRFYFEM 1566



 Score = 85.9 bits (211), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/195 (28%), Positives = 90/195 (46%), Gaps = 16/195 (8%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI--------RGLIR 164
            + +D  T N ++   C  G L DA +L   M      PD   CI           RGL+R
Sbjct: 1396 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD---CITYTCLIHAHCERGLLR 1452

Query: 165  IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
                 +A K+   M+  G +P  +T+ +++   C+RG + SA     +M   G EP+ IT
Sbjct: 1453 -----EARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 1507

Query: 225  YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
            YN ++  +   G+ + A   + + L +G      TYT+LI+  CK      A+    +M 
Sbjct: 1508 YNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMH 1567

Query: 285  IEGCSPDIVTYNSLV 299
              G  PD +T+ +L+
Sbjct: 1568 QNGIHPDYLTHKALL 1582


>gi|357115831|ref|XP_003559689.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Brachypodium distachyon]
          Length = 968

 Score =  195 bits (495), Expect = 6e-47,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 226/453 (49%), Gaps = 13/453 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L + C  G L  A  +I  M +   +P+      ++   ++  R + A  VL
Sbjct: 224 DVTTCNIVLNSMCIEGNLKGAKHMIHKM-KSCSLPNVITYNTILHWYVKKGRFKAAMCVL 282

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +G   D  TYN+M+  LCK  +   A  LL  M      PD  TYNT+++  FD 
Sbjct: 283 EDMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDE 342

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K   AI  + + LR+G  P L TYT LI+  C+   I  A+ VL +M + G  P  VTY
Sbjct: 343 SKMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTY 402

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++++N     G   +A  V +N+   G  P+  TY  LL  L   G    + +  + M+ 
Sbjct: 403 SAMLN-----GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGG---HLVQAKEFMSC 454

Query: 356 ASHSPTVF---TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
             H P+     T N L+ G+C +G +D A++   +MV+ N  PDI TY  +L   C++G 
Sbjct: 455 IVHIPSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGK 514

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM-ENGISPDDITHR 471
           +  A+ LL ++      P ++TY  L+ GL K+G ++ A  L+ +++ + G+  D I + 
Sbjct: 515 IVPAVILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYN 574

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +++ G+ +A ++ +    + ++ +       ++Y +++HG  K   +  +I + + M+  
Sbjct: 575 SMMNGYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRK 634

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             KP +  +  ++  ++  GM E A K   K++
Sbjct: 635 GIKPTNVTYRLLILGLSKHGMIEIAVKFLDKMV 667



 Score =  194 bits (493), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 222/445 (49%), Gaps = 1/445 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+KT N +L   C+ G L +A  L + M   N IPD H    L+ G  R  +I  A  +L
Sbjct: 463 DQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILL 522

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV-SGCEPDVITYNTILRTMFD 234
           Q+M+  G VPD +TY  ++ GL K GQ+++A  L  E+    G   D I YN+++     
Sbjct: 523 QMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLK 582

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK  +      D  +    P   +Y IL+    K+  ++R+I +  DM  +G  P  VT
Sbjct: 583 AGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVT 642

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y  L+    K G  + AV  ++ ++  G+ P+ ++++ L+++   +       ++ + M 
Sbjct: 643 YRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMK 702

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               SP+  TY+ +INGL +   +  + +    MV    +P    Y  ++ A C+ G +N
Sbjct: 703 WLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDIN 762

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A +L   +      P  +  ++++ GL+K G +E+ ++++  ++  G+ P   T  TL+
Sbjct: 763 GAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLM 822

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+  ++ +A+ L   +   G K+    Y ++I GLCK + V  A+++ E M S   +
Sbjct: 823 HGLCKEAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEMKSKGLR 882

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKL 559
           P+ T ++T+ + +   G T E  KL
Sbjct: 883 PNVTTYTTLTEAIYGTGRTLEGEKL 907



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 137/530 (25%), Positives = 240/530 (45%), Gaps = 43/530 (8%)

Query: 74  DQDEWSSESHVLAVNKKLRGLTITKKSHDPSL--PSSDGPFVENDEKTNNKILQNFCSRG 131
           D ++   E+ V   N  +  L   K+S    L      G  +  DE T N +++ F    
Sbjct: 284 DMEKNGVEADVYTYNIMIDKLCKMKRSTHAYLLLKRMRGDNLAPDECTYNTLIKGFFDES 343

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           K+  A  + + M R+   P       LI G  R   I++A +VL  M ++G  P  +TY+
Sbjct: 344 KMMLAIHIFNEMLRQGLKPSLATYTTLIDGYCRNGTIDEALRVLYEMQVAGVKPSEVTYS 403

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK----- 246
            M+ G      +  A ++ D M   GC PDV TY  +LR +   G   QA  F       
Sbjct: 404 AMLNG-----SVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHI 458

Query: 247 ----------------------DQLRKGCP--------PYLITYTILIEQVCKQCGIARA 276
                                 D+    C         P + TYTIL+   C++  I  A
Sbjct: 459 PSAIDQKTLNALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPA 518

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLH 335
           + +L  M  +G  PDIVTY  L+    K+G+   A  +   ++ + GM  + I YN++++
Sbjct: 519 VILLQMMLEKGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMN 578

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                G    V+  +  MN+    P   +YNIL++G  K G + R+I  +  MV K  +P
Sbjct: 579 GYLKAGKLHKVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKP 638

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
             VTY  ++  L K GM+  A++ L  +      P  ++++ LI+  ++K  M  A+ L+
Sbjct: 639 TNVTYRLLILGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLF 698

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M    +SP   T+  +I G  R + ++ + D+L+++ + G + +++ Y  +I+  C+ 
Sbjct: 699 NCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRF 758

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             ++ A ++ E M +    P +   S+IV+ ++  G  EE   ++  +I 
Sbjct: 759 GDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIR 808



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/469 (24%), Positives = 214/469 (45%), Gaps = 36/469 (7%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G + +A  + D M +    PD +   NL+RGL +   + +A + +  +V      D  T 
Sbjct: 408 GSVHEAFSVYDNMEKYGCSPDVYTYRNLLRGLCKGGHLVQAKEFMSCIVHIPSAIDQKTL 467

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N ++ G+C  G +  A+ L ++M      PD+ TY  +L      GK   A+   +  L 
Sbjct: 468 NALLLGICNHGSLDEALDLCEKMVTINFIPDIHTYTILLSGFCRKGKIVPAVILLQMMLE 527

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-EGCSPDIVTYNSLVNFSCKQGKYD 309
           KG  P ++TYT L++ + K+  +  A  +  ++   EG   D + YNS++N   K GK  
Sbjct: 528 KGLVPDIVTYTCLLKGLIKEGQVKAASYLFQEIICKEGMYADCIAYNSMMNGYLKAGKLH 587

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
              + I ++    + PN  +YN L+H    +G       +   M      PT  TY +LI
Sbjct: 588 KVEMTIYDMNQNKVYPNPASYNILMHGHIKKGHLSRSIYLYKDMVRKGIKPTNVTYRLLI 647

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
            GL K+G+++ A+   ++MV +   PD ++++ ++ A  ++  +++ALQL + +     S
Sbjct: 648 LGLSKHGMIEIAVKFLDKMVLEGIYPDRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMS 707

Query: 430 PCLITYNTLIDGLAKK-----------------------------------GCMEKAMVL 454
           P   TY+ +I+GL +K                                   G +  A  L
Sbjct: 708 PSSKTYSAMINGLIRKNWLQHSCDVLRDMVESGLEPKHTHYIALINAKCRFGDINGAFRL 767

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             +M   GI P ++   +++ G  +  +VEE + +   I + G     + +  ++HGLCK
Sbjct: 768 KEEMTALGIVPAEVADSSIVRGLSKCGKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCK 827

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             K+  A+ +  LM S   K D   ++ ++  +       +A +L++++
Sbjct: 828 EAKISDALHLKSLMESCGLKIDVVTYNVLITGLCKIQCVSDALELYEEM 876



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 68/246 (27%), Positives = 121/246 (49%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + + ++  F  + +++DA +L + M      P       +I GLIR + ++ +  VL
Sbjct: 674 DRLSFDVLINAFSEKSRMSDALQLFNCMKWLYMSPSSKTYSAMINGLIRKNWLQHSCDVL 733

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV SG  P    Y  ++   C+ G I  A  L +EM+  G  P  +  ++I+R +   
Sbjct: 734 RDMVESGLEPKHTHYIALINAKCRFGDINGAFRLKEEMTALGIVPAEVADSSIVRGLSKC 793

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK ++ I  +   +R G  P + T+T L+  +CK+  I+ A+ +   M   G   D+VTY
Sbjct: 794 GKVEEGIIVFCSIIRAGMVPTIATFTTLMHGLCKEAKISDALHLKSLMESCGLKIDVVTY 853

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+   CK     DA+ +   + S+G+ PN  TY TL  ++   G     +K+L+ + +
Sbjct: 854 NVLITGLCKIQCVSDALELYEEMKSKGLRPNVTTYTTLTEAIYGTGRTLEGEKLLNDIED 913

Query: 356 ASHSPT 361
               P+
Sbjct: 914 RGLVPS 919


>gi|297739257|emb|CBI28908.3| unnamed protein product [Vitis vinifera]
          Length = 658

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 118/446 (26%), Positives = 214/446 (47%), Gaps = 5/446 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++++F + G + +   +   M      P  +    L+ GL+    IE A +V ++M  
Sbjct: 194 NSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMEC 253

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PD ++YN M+ G CK G  + A+    +M     EPD ITY T+++  +  G F  
Sbjct: 254 GKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDS 313

Query: 241 AIGFWKDQLRKGC--PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +  +++   +G   PP+   Y+++I  +CK         V ++M  +GC  ++  Y +L
Sbjct: 314 CLHLYQEMEERGLEIPPH--AYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTAL 371

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K G  ++A+ +   +   G EP+ +TY  +++ L   G  D   +  +   +   
Sbjct: 372 IDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEV 431

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +     Y+ LI+GL K G VD A   F +MV + C  D   YN ++ AL K G + EAL 
Sbjct: 432 AVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALV 491

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +    C   + TY  LI GL K+   E+A+ L+  M++ GI+P   + R L  G C
Sbjct: 492 LFKRMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLC 551

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
            + +V  A  +L E+   G  +  +A+  +I+ LCK+ + + A ++ + ++    +    
Sbjct: 552 LSGKVARACKILDELAPMG-VIPETAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGR 610

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
           V + ++  +   G  + A KL    I
Sbjct: 611 VRTILINALRKAGNADLAMKLMHSKI 636



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 110/409 (26%), Positives = 190/409 (46%), Gaps = 1/409 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +LIR    +  +E+   V + M  SG  P   T+N ++ GL     I SA  + + M   
Sbjct: 195 SLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECG 254

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
              PDV++YNT+++     G  K+A+  + D  ++   P  ITY  LI+    +      
Sbjct: 255 KIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSC 314

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + +  +M   G       Y+ ++   CK G+  +   V  N+  +G + N   Y  L+ +
Sbjct: 315 LHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDA 374

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
            G  G  +    + + M      P   TY +++NGLCK G +D A+  F          +
Sbjct: 375 YGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVN 434

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            + Y++++  L K G ++EA +    +    C      YN LID LAK G ME+A+VL+ 
Sbjct: 435 AMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFK 494

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M + G      T+  LI G  +  + EEA+ L   +  +G     +++R +  GLC S 
Sbjct: 495 RMEKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSG 554

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           KV  A ++L+ +      P+ T F  ++  +   G TE+A KL   +++
Sbjct: 555 KVARACKILDELAPMGVIPE-TAFEDMINVLCKAGRTEQACKLADGIVD 602



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 95/359 (26%), Positives = 173/359 (48%), Gaps = 4/359 (1%)

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           +  E    G    V   N+++R+    G  ++ +  W+     G  P L T+  L+  + 
Sbjct: 177 IFGEFKEKGFLMTVFAANSLIRSFGALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLV 236

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
               I  A  V + M      PD+V+YN+++   CK G    A+    ++  R +EP+ I
Sbjct: 237 NSMFIESAERVFEVMECGKIGPDVVSYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKI 296

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TY TL+ +  S G +D+   +   M E         Y+++I GLCK G      + F  M
Sbjct: 297 TYLTLIQACYSEGNFDSCLHLYQEMEERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENM 356

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             K C+ ++  Y  ++ A  K G +NEA+ L   + G    P  +TY  +++GL K G +
Sbjct: 357 NKKGCKANVAIYTALIDAYGKNGNVNEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRL 416

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           ++A+  +    +N ++ + + + +LI G  +A +V+EA    +E+ +RG    +  Y  +
Sbjct: 417 DEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNAL 476

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTV--FSTIVKKVADDGMTEEAYKLWQKLIE 565
           I  L KS K++ A+ + + M   +   D TV  ++ ++  +  +   EEA KLW  +I+
Sbjct: 477 IDALAKSGKMEEALVLFKRM--EKEGCDQTVYTYTILISGLFKEHRNEEALKLWDLMID 533



 Score =  129 bits (324), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 85/355 (23%), Positives = 153/355 (43%), Gaps = 35/355 (9%)

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
           FW    +K     +  Y  LI+ +       R   +  +   +G    +   NSL+    
Sbjct: 142 FWWAGKQKNYIHKIECYVSLIDVLSLSSDFDRVRCIFGEFKEKGFLMTVFAANSLIRSFG 201

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
             G  ++ + V   +   G+EP+  T+N LL+ L +    ++ +++ ++M      P V 
Sbjct: 202 ALGMVEELLWVWRRMKESGIEPSLYTFNFLLNGLVNSMFIESAERVFEVMECGKIGPDVV 261

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT--------------------- 402
           +YN +I G CK G   +A+  F  M  +N +PD +TY T                     
Sbjct: 262 SYNTMIKGYCKAGNTKKAMEKFTDMEKRNLEPDKITYLTLIQACYSEGNFDSCLHLYQEM 321

Query: 403 --------------VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
                         V+G LCK+G   E   +   +N   C   +  Y  LID   K G +
Sbjct: 322 EERGLEIPPHAYSLVIGGLCKDGRTVEGSSVFENMNKKGCKANVAIYTALIDAYGKNGNV 381

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +A+ L+ +M   G  PDD+T+  ++ G C++ +++EAV+  +        +    Y  +
Sbjct: 382 NEAINLFERMKGEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSL 441

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           I GL K+ +VD A +  E M+      D   ++ ++  +A  G  EEA  L++++
Sbjct: 442 IDGLGKAGRVDEAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRM 496



 Score =  107 bits (268), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 63/241 (26%), Positives = 114/241 (47%), Gaps = 1/241 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G   E D+ T   I+   C  G+L +A +  +         +  F  +LI GL +  R++
Sbjct: 393 GEGFEPDDVTYGVIVNGLCKSGRLDEAVEYFEFCKDNEVAVNAMFYSSLIDGLGKAGRVD 452

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +A K  + MV  G   D+  YN ++  L K G++  A+ L   M   GC+  V TY  ++
Sbjct: 453 EAEKFFEEMVERGCPQDSYCYNALIDALAKSGKMEEALVLFKRMEKEGCDQTVYTYTILI 512

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +F   + ++A+  W   + KG  P   ++  L   +C    +ARA ++LD++A  G  
Sbjct: 513 SGLFKEHRNEEALKLWDLMIDKGITPTTASFRALSVGLCLSGKVARACKILDELAPMGVI 572

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P+   +  ++N  CK G+ + A  + + ++ RG E        L+++L   G  D   K+
Sbjct: 573 PE-TAFEDMINVLCKAGRTEQACKLADGIVDRGREVPGRVRTILINALRKAGNADLAMKL 631

Query: 350 L 350
           +
Sbjct: 632 M 632


>gi|449513353|ref|XP_004164304.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g06920-like [Cucumis sativus]
          Length = 904

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 128/453 (28%), Positives = 219/453 (48%), Gaps = 1/453 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D    N  +  F   GK+  A K    M     + D     ++I  L + DR+ +A 
Sbjct: 266 LEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAV 325

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + M  +  VP    YN M+ G    G+   A +LL+     GC P V++YN IL  +
Sbjct: 326 ELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCL 385

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  +A+  + ++++K   P L TY I+I+ +CK   +  A+ V D M   G  P++
Sbjct: 386 GRKGQVDEALKKF-EEMKKDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNV 444

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +T N +V+  CK  + DDA  +   L  +   P+++TY +L+  LG  G  D   K+ + 
Sbjct: 445 ITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQ 504

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +A+  P    Y  LI    K G  +     +N+M+   C PD++  NT +  + K G 
Sbjct: 505 MLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGE 564

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +   L   +      P   +Y  LI GL K G   +A  L+  M E G   D   + T
Sbjct: 565 IEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNT 624

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I GFC++ +V +A  LL+E+  +G++     Y  VI GL K  ++D A  + E   S  
Sbjct: 625 VIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKG 684

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            + +  ++S+++      G  +EAY + ++L++
Sbjct: 685 IELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 717



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 201/411 (48%), Gaps = 6/411 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   +L DA  + + +  +   PD     +LI GL R  R+++A K+ + M
Sbjct: 446 TVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQM 505

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + +  +P+ + Y  ++    K G+      + +EM   GC PD++  NT +  +F  G+ 
Sbjct: 506 LDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEI 565

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++    +++    G  P   +YTILI  + K      A E+   M  +GC  D   YN++
Sbjct: 566 EKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTV 625

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK GK + A  ++  + ++G EP  +TY +++  L      D +D+   +  EA  
Sbjct: 626 IDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAK---IDRLDEAYMLFEEAKS 682

Query: 359 SP---TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 V  Y+ LI+G  K G +D A     +++ K   P++ T+N +L AL K   ++E
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL     +    C+P  ITY+ LI GL K     KA V + +M + G  P+  T+ T+I 
Sbjct: 743 ALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMIS 802

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           G  +A  + EA  L ++  ++G    ++ Y  +I GL  + +   A ++ E
Sbjct: 803 GLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFE 853



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 126/480 (26%), Positives = 223/480 (46%), Gaps = 36/480 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +   GK  DA  L++   R+  IP       ++  L R  ++++A K  + M  
Sbjct: 344 NTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEM-K 402

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
              +P+  TYN+M+  LCK G++ +A+ + D M  +G  P+VIT N ++  +    +   
Sbjct: 403 KDAIPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLDD 462

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   ++    K C P  +TY  LIE + +   +  A ++ + M      P+ V Y SL+ 
Sbjct: 463 ACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIR 522

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G+ +D   + N +L  G  P+ +  NT +  +   G  +    +   +      P
Sbjct: 523 NFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIP 582

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              +Y ILI+GL K G    A   F  M  + C  D   YNTV+   CK G +N+A QLL
Sbjct: 583 DARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLL 642

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++TY ++IDGLAK   +++A +L+ +    GI  + + + +LI GF + 
Sbjct: 643 EEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKV 702

Query: 481 DQVEEAVDLLKEIGKRG----------------------------NKMRN-------SAY 505
            +++EA  +++E+ ++G                              M++         Y
Sbjct: 703 GRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITY 762

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++IHGLCK +K + A    + M    +KP+   ++T++  +A  G   EA  L++K  E
Sbjct: 763 SILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKE 822



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/406 (26%), Positives = 192/406 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +++     G++ +A KL + M   NQIP+     +LIR   +  R E   K+ 
Sbjct: 478 DAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIY 537

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PD +  N  +  + K G+I    AL  E+   G  PD  +Y  ++  +   
Sbjct: 538 NEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKA 597

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   +     +GC      Y  +I+  CK   + +A ++L++M  +G  P +VTY
Sbjct: 598 GFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTY 657

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            S+++   K  + D+A ++     S+G+E N + Y++L+   G  G  D    I++ + +
Sbjct: 658 GSVIDGLAKIDRLDEAYMLFEEAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 717

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P V+T+N L++ L K   +  A+  F  M    C P+ +TY+ ++  LCK    N+
Sbjct: 718 KGLTPNVYTWNCLLDALVKAEEISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNK 777

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A      +      P + TY T+I GLAK G + +A  L+ +  E G   D   +  +I 
Sbjct: 778 AFVFWQEMQKQGFKPNVFTYTTMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIE 837

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G   A++  +A  L +E   +G  +      +++  L K++ ++ A
Sbjct: 838 GLSNANRASDAYRLFEEARLKGCSIYTKTCVVLLDSLHKAECIEQA 883



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 114/476 (23%), Positives = 220/476 (46%), Gaps = 12/476 (2%)

Query: 87  VNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARR 146
           V++ L+     KK   P+L             T N ++   C  GKL  A  + D M   
Sbjct: 391 VDEALKKFEEMKKDAIPNLS------------TYNIMIDMLCKAGKLETALVVRDAMKDA 438

Query: 147 NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
              P+      ++  L +  R++ A  + + +      PD +TY  ++ GL + G++  A
Sbjct: 439 GLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEA 498

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
             L ++M  +   P+ + Y +++R  F  G+ +     + + LR GC P L+     ++ 
Sbjct: 499 YKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDC 558

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           V K   I +   +  ++   G  PD  +Y  L++   K G   +A  +   +  +G   +
Sbjct: 559 VFKAGEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLD 618

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           +  YNT++      G  +   ++L+ M    H PTV TY  +I+GL K   +D A   F 
Sbjct: 619 TRAYNTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFE 678

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +  SK  + ++V Y++++    K G ++EA  ++  L     +P + T+N L+D L K  
Sbjct: 679 EAKSKGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 738

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            + +A+V +  M +   +P+ IT+  LI G C+  +  +A    +E+ K+G K     Y 
Sbjct: 739 EISEALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYT 798

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            +I GL K+  +  A  + E         D  +++ I++ +++     +AY+L+++
Sbjct: 799 TMISGLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEE 854



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 114/518 (22%), Positives = 207/518 (39%), Gaps = 106/518 (20%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P  + CI ++   I+  ++ +A   +Q M      P    Y  ++G L         + L
Sbjct: 163 PSNNTCIEIVLSFIKSRKLREAFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTL 222

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
             +M   G   +V  + T++R     G+   A+    +       P ++ Y + I+   K
Sbjct: 223 FQQMQELGYAVNVHLFTTLIRVFAREGRVDAALSLLDEMKSNSLEPDVVLYNVCIDCFGK 282

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK------------------------- 304
              +  A +   +M   G   D VTY S++   CK                         
Sbjct: 283 AGKVDMAWKXFHEMKANGLVLDDVTYTSMIGVLCKADRLNEAVELFEHMDQNKQVPCAYA 342

Query: 305 ----------QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
                      GK++DA  ++     +G  P+ ++YN +L  LG +G  D   K  + M 
Sbjct: 343 YNTMIMGYGMAGKFEDAYSLLERQRRKGCIPSVVSYNCILSCLGRKGQVDEALKKFEEMK 402

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           + +  P + TYNI+I+ LCK G ++ A+   + M      P+++T N ++  LCK   L+
Sbjct: 403 KDA-IPNLSTYNIMIDMLCKAGKLETALVVRDAMKDAGLFPNVITVNIMVDRLCKAQRLD 461

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A  +   L+  +C P  +TY +LI+GL + G +++A  LY QM++    P+ + + +LI
Sbjct: 462 DACSIFEGLDHKTCRPDAVTYCSLIEGLGRHGRVDEAYKLYEQMLDANQIPNAVVYTSLI 521

Query: 475 WGF-----------------------------------CRADQVEEAVDLLKEIGKRGNK 499
             F                                    +A ++E+   L +EI   G  
Sbjct: 522 RNFFKCGRKEDGHKIYNEMLRLGCSPDLLLLNTYMDCVFKAGEIEKGRALFQEIKNLGFI 581

Query: 500 MRNSAYRLVIHGL-----------------------------------CKSKKVDMAIQV 524
               +Y ++IHGL                                   CKS KV+ A Q+
Sbjct: 582 PDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAYNTVIDGFCKSGKVNKAYQL 641

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
           LE M +  ++P    + +++  +A     +EAY L+++
Sbjct: 642 LEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEE 679



 Score =  136 bits (342), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 87/332 (26%), Positives = 152/332 (45%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G++     L   +     IPD      LI GL++     +A ++   M   G V DT  Y
Sbjct: 563 GEIEKGRALFQEIKNLGFIPDARSYTILIHGLVKAGFAHEAYELFYTMKEQGCVLDTRAY 622

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N ++ G CK G++  A  LL+EM   G EP V+TY +++  +    +  +A   +++   
Sbjct: 623 NTVIDGFCKSGKVNKAYQLLEEMKTKGHEPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 682

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           KG    ++ Y+ LI+   K   I  A  +++++  +G +P++ T+N L++   K  +  +
Sbjct: 683 KGIELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEISE 742

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A++   ++      PN ITY+ L+H L     ++        M +    P VFTY  +I+
Sbjct: 743 ALVCFQSMKDLKCTPNYITYSILIHGLCKIRKFNKAFVFWQEMQKQGFKPNVFTYTTMIS 802

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GL K G +  A   F +   K    D   YN ++  L      ++A +L        CS 
Sbjct: 803 GLAKAGNIVEADTLFEKFKEKGGVADSAIYNAIIEGLSNANRASDAYRLFEEARLKGCSI 862

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
              T   L+D L K  C+E+A ++   + E  
Sbjct: 863 YTKTCVVLLDSLHKAECIEQAAIVGAVLRETA 894



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 91/411 (22%), Positives = 186/411 (45%), Gaps = 36/411 (8%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
            YN ++  + +  +      +L+EMS++G  P   T   I+ +   + K ++A  F +  
Sbjct: 132 AYNSLLMVMARTRKFNCLEQILEEMSIAGFGPSNNTCIEIVLSFIKSRKLREAFTFIQTM 191

Query: 249 LRKGCPPYLITY-----------------------------------TILIEQVCKQCGI 273
            +    P    Y                                   T LI    ++  +
Sbjct: 192 RKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIRVFAREGRV 251

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A+ +LD+M      PD+V YN  ++   K GK D A    + + + G+  + +TY ++
Sbjct: 252 DAALSLLDEMKSNSLEPDVVLYNVCIDCFGKAGKVDMAWKXFHEMKANGLVLDDVTYTSM 311

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L      +   ++ + M++    P  + YN +I G    G  + A +   +   K C
Sbjct: 312 IGVLCKADRLNEAVELFEHMDQNKQVPCAYAYNTMIMGYGMAGKFEDAYSLLERQRRKGC 371

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P +V+YN +L  L ++G ++EAL+    +   +  P L TYN +ID L K G +E A+V
Sbjct: 372 IPSVVSYNCILSCLGRKGQVDEALKKFEEMKKDAI-PNLSTYNIMIDMLCKAGKLETALV 430

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +   M + G+ P+ IT   ++   C+A ++++A  + + +  +  +     Y  +I GL 
Sbjct: 431 VRDAMKDAGLFPNVITVNIMVDRLCKAQRLDDACSIFEGLDHKTCRPDAVTYCSLIEGLG 490

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +  +VD A ++ E M+ +   P+  V++++++     G  E+ +K++ +++
Sbjct: 491 RHGRVDEAYKLYEQMLDANQIPNAVVYTSLIRNFFKCGRKEDGHKIYNEML 541



 Score = 41.2 bits (95), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 31/138 (22%), Positives = 65/138 (47%), Gaps = 6/138 (4%)

Query: 429 SPCLITYNTLIDGLA---KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
           + C   YN+L+  +A   K  C+E+ +    +M   G  P + T   ++  F ++ ++ E
Sbjct: 127 AHCREAYNSLLMVMARTRKFNCLEQIL---EEMSIAGFGPSNNTCIEIVLSFIKSRKLRE 183

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A   ++ + K   +   SAY  +I  L  S+  D  + + + M    Y  +  +F+T+++
Sbjct: 184 AFTFIQTMRKLKFRPAFSAYTNLIGALSTSRDSDCMLTLFQQMQELGYAVNVHLFTTLIR 243

Query: 546 KVADDGMTEEAYKLWQKL 563
             A +G  + A  L  ++
Sbjct: 244 VFAREGRVDAALSLLDEM 261


>gi|356532720|ref|XP_003534919.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At3g22470, mitochondrial-like [Glycine max]
          Length = 468

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 107/383 (27%), Positives = 205/383 (53%), Gaps = 2/383 (0%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P+TIT+  ++ GLC +G+++  +   D++     + + ++Y T+L  +   G+ + A
Sbjct: 75  GYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCA 134

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           I   +    +   P ++ Y+ +I+ +CK   +  A ++  +M      P+++TYN+L+  
Sbjct: 135 IKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICA 194

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G+   A  +++ ++ + + P+  T++ L+ +L   G      +I   M +   +P 
Sbjct: 195 FCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQMGVNPN 252

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V++YNI+INGLCK   VD A+N   +M+ KN  PD VTYN+++  LCK G +  AL L++
Sbjct: 253 VYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMN 312

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++       ++TY +L+D L K   ++KA  L+ +M E GI P   T+  LI G C+  
Sbjct: 313 EMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGG 372

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +++ A +L + +  +G  +    Y ++I GLCK    D A+ +   M  +   P+   F 
Sbjct: 373 RLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFE 432

Query: 542 TIVKKVADDGMTEEAYKLWQKLI 564
            I++ + +    ++A KL  ++I
Sbjct: 433 IIIRSLFEKDENDKAEKLLHEMI 455



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 112/421 (26%), Positives = 207/421 (49%), Gaps = 8/421 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T + ++  FC  G++  +  L+  + +    P+      L++GL     ++K  
Sbjct: 41  IEQNLVTLSILINCFCHLGQMAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLL 100

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                +V      + ++Y  ++ GLCK G+ R AI LL  +      P+V+ Y+ I+  +
Sbjct: 101 HFHDKVVAQAFQTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGL 160

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +    +A   + +   +   P +ITY  LI   C    +  A  +L +M ++  +PD+
Sbjct: 161 CKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDV 220

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T++ L++  CK+GK  +A  + + ++  G+ PN  +YN +++ L        VD+ +++
Sbjct: 221 YTFSILIDALCKEGK--NAKQIFHAMVQMGVNPNVYSYNIMINGLCK---CKRVDEAMNL 275

Query: 353 MNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           + E  H    P   TYN LI+GLCK G +  A+N  N+M  +    D+VTY ++L ALCK
Sbjct: 276 LREMLHKNMVPDTVTYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCK 335

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              L++A  L   +      P + TY  LIDGL K G ++ A  L+  ++  G   D  T
Sbjct: 336 NQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWT 395

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           +  +I G C+    +EA+ +  ++   G       + ++I  L +  + D A ++L  MI
Sbjct: 396 YTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMI 455

Query: 530 S 530
           +
Sbjct: 456 A 456



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 104/350 (29%), Positives = 177/350 (50%), Gaps = 2/350 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           + ++ +   +L   C  G+   A KL+ ++  R+  P+      +I GL +   + +A  
Sbjct: 112 QTNQVSYGTLLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYD 171

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M      P+ ITYN ++   C  GQ+  A +LL EM +    PDV T++ ++  + 
Sbjct: 172 LYSEMDAREIFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALC 231

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK  + I  +   ++ G  P + +Y I+I  +CK   +  A+ +L +M  +   PD V
Sbjct: 232 KEGKNAKQI--FHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTV 289

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYNSL++  CK G+   A+ ++N +  RG   + +TY +LL +L      D    +   M
Sbjct: 290 TYNSLIDGLCKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKM 349

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E    PT++TY  LI+GLCK G +  A   F  ++ K C  D+ TY  ++  LCKEGM 
Sbjct: 350 KERGIQPTMYTYTALIDGLCKGGRLKNAQELFQHLLVKGCCIDVWTYTVMISGLCKEGMF 409

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +EAL +   +  + C P  +T+  +I  L +K   +KA  L  +M+  G+
Sbjct: 410 DEALAIKSKMEDNGCIPNAVTFEIIIRSLFEKDENDKAEKLLHEMIAKGL 459



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 107/379 (28%), Positives = 192/379 (50%), Gaps = 10/379 (2%)

Query: 123 ILQNFCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +++  C +G++       D ++A+  Q     +   L+ GL +      A K+L+++   
Sbjct: 86  LMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYG-TLLNGLCKTGETRCAIKLLRMIEDR 144

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
              P+ + Y+ ++ GLCK   +  A  L  EM      P+VITYNT++      G+   A
Sbjct: 145 STRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYNTLICAFCLAGQLMGA 204

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
                + + K   P + T++ILI+ +CK+   A+  ++   M   G +P++ +YN ++N 
Sbjct: 205 FSLLHEMILKNINPDVYTFSILIDALCKEGKNAK--QIFHAMVQMGVNPNVYSYNIMING 262

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS-- 359
            CK  + D+A+ ++  +L + M P+++TYN+L+  L   G    +   L++MNE  H   
Sbjct: 263 LCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSG---RITSALNLMNEMHHRGQ 319

Query: 360 -PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
              V TY  L++ LCK   +D+A   F +M  +  QP + TY  ++  LCK G L  A +
Sbjct: 320 PADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTMYTYTALIDGLCKGGRLKNAQE 379

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   L    C   + TY  +I GL K+G  ++A+ +  +M +NG  P+ +T   +I    
Sbjct: 380 LFQHLLVKGCCIDVWTYTVMISGLCKEGMFDEALAIKSKMEDNGCIPNAVTFEIIIRSLF 439

Query: 479 RADQVEEAVDLLKEIGKRG 497
             D+ ++A  LL E+  +G
Sbjct: 440 EKDENDKAEKLLHEMIAKG 458



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 98/387 (25%), Positives = 191/387 (49%), Gaps = 2/387 (0%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M++       I +N ++G L K     + I+L  +M V G E +++T + ++      G+
Sbjct: 1   MLLVRHTSPIIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQ 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              +       L+ G  P  IT+T L++ +C +  + + +   D +  +    + V+Y +
Sbjct: 61  MAFSFSLLGKILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGT 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK G+   A+ ++  +  R   PN + Y+ ++  L      +    +   M+   
Sbjct: 121 LLNGLCKTGETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDARE 180

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V TYN LI   C  G +  A +  ++M+ KN  PD+ T++ ++ ALCKEG    A 
Sbjct: 181 IFPNVITYNTLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAK 238

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           Q+ H +     +P + +YN +I+GL K   +++AM L  +M+   + PD +T+ +LI G 
Sbjct: 239 QIFHAMVQMGVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGL 298

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C++ ++  A++L+ E+  RG       Y  ++  LCK++ +D A  +   M     +P  
Sbjct: 299 CKSGRITSALNLMNEMHHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKERGIQPTM 358

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLI 564
             ++ ++  +   G  + A +L+Q L+
Sbjct: 359 YTYTALIDGLCKGGRLKNAQELFQHLL 385



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 95/345 (27%), Positives = 186/345 (53%), Gaps = 4/345 (1%)

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
           +I +N IL ++     +   I   K    KG    L+T +ILI   C    +A +  +L 
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
            +   G  P+ +T+ +L+   C +G+    +   + ++++  + N ++Y TLL+ L   G
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
                 K+L ++ + S  P V  Y+ +I+GLCK  LV+ A + +++M ++   P+++TYN
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIFPNVITYN 189

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           T++ A C  G L  A  LLH +   + +P + T++ LID L K+G  + A  ++  M++ 
Sbjct: 190 TLICAFCLAGQLMGAFSLLHEMILKNINPDVYTFSILIDALCKEG--KNAKQIFHAMVQM 247

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G++P+  ++  +I G C+  +V+EA++LL+E+  +        Y  +I GLCKS ++  A
Sbjct: 248 GVNPNVYSYNIMINGLCKCKRVDEAMNLLREMLHKNMVPDTVTYNSLIDGLCKSGRITSA 307

Query: 522 IQVLELMISSRYKPDDTV-FSTIVKKVADDGMTEEAYKLWQKLIE 565
           + ++  M   R +P D V +++++  +  +   ++A  L+ K+ E
Sbjct: 308 LNLMNEM-HHRGQPADVVTYTSLLDALCKNQNLDKATALFMKMKE 351



 Score = 72.0 bits (175), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 41/173 (23%), Positives = 88/173 (50%)

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           I+ +N +LG+L K       + L   ++       L+T + LI+     G M  +  L G
Sbjct: 10  IIEFNKILGSLVKLKYYLTVISLSKQMDVKGIEQNLVTLSILINCFCHLGQMAFSFSLLG 69

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           ++++ G  P+ IT  TL+ G C   +V++ +    ++  +  +    +Y  +++GLCK+ 
Sbjct: 70  KILKLGYXPNTITWTTLMKGLCLKGEVKKLLHFHDKVVAQAFQTNQVSYGTLLNGLCKTG 129

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           +   AI++L ++     +P+  ++S I+  +  D +  EAY L+ ++   ++F
Sbjct: 130 ETRCAIKLLRMIEDRSTRPNVVMYSAIIDGLCKDKLVNEAYDLYSEMDAREIF 182


>gi|255584017|ref|XP_002532754.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223527505|gb|EEF29631.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 721

 Score =  195 bits (495), Expect = 7e-47,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 212/448 (47%), Gaps = 9/448 (2%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T + +L       +  D   L D +   N  PD +    ++R L  +    KA +++  
Sbjct: 97  RTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEMIHW 156

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  +      + YN+++ GLCK  +I  A+ + + +   G E +V+TY          GK
Sbjct: 157 MEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYY---------GK 207

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A   +K+   KG     ITY+ILI+  C++  +  AI  LD M        +  YNS
Sbjct: 208 FNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNS 267

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N  CK G    A    + ++ +G+ P  +TY +L+    + G W    K+ + M    
Sbjct: 268 LINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKG 327

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP  +T+  +I+GLC+  ++  AI  F +M  +   P  VTYN ++   C+ G ++EA 
Sbjct: 328 ISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAF 387

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            LL  + G    P   TY  LI GL   G + +A      + ++    +++ +  L+ G+
Sbjct: 388 HLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGY 447

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  + ++AV   + + +RG  M    Y ++I G  +         +L+ M +   +PD 
Sbjct: 448 CKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDA 507

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +++ ++ + +  G  +EA+ LW  +++
Sbjct: 508 VIYTNMIDRHSKAGNLKEAFGLWDIMVD 535



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/447 (25%), Positives = 210/447 (46%), Gaps = 1/447 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++ +FC RG++ +A   +D M + +     +   +LI G  ++     A      M
Sbjct: 229 TYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYCKLGNASAAKYYFDEM 288

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P  +TY  ++ G C  G+   A  + +EM+  G  P+  T+  I+  +      
Sbjct: 289 IDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMM 348

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +AI  + +   +   P  +TY ++IE  C+   I+ A  +LD+M  +G  PD  TY  L
Sbjct: 349 AEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPL 408

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  G+  +A   +++L     + N++ Y+ L+H     G +        +M E   
Sbjct: 409 ISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGV 468

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +  +  Y ILI+G  +            +M +   +PD V Y  ++    K G L EA  
Sbjct: 469 AMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFG 528

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L  ++    C P ++TY  LI+GL K G M+KA +L  + + + ++P+ IT+   +    
Sbjct: 529 LWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLT 588

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R   +E+AV L   + K G      +Y ++I G C+  K++ A ++L  M  +   PD  
Sbjct: 589 RGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYI 647

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +STI+ +       +EA KLW  +++
Sbjct: 648 TYSTIIYEQCKRSNLQEAIKLWHTMLD 674



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 123/444 (27%), Positives = 205/444 (46%), Gaps = 1/444 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G  + A    D M  +   P      +LI G        KA KV   M  
Sbjct: 266 NSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTA 325

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+T T+  ++ GLC+   +  AI L  EM      P  +TYN ++     +G   +
Sbjct: 326 KGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISE 385

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     + + KG  P   TY  LI  +C    ++ A E +DD+  +    + + Y++LV+
Sbjct: 386 AFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVH 445

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK+G++ DAV     ++ RG+  + + Y  L+          A+  +L  M+     P
Sbjct: 446 GYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREHDTRALFGLLKEMHNHGLRP 505

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
               Y  +I+   K G +  A   ++ MV + C P++VTY  ++  LCK G++++A  L 
Sbjct: 506 DAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYTALINGLCKAGLMDKAELLS 565

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
                S  +P  ITY   +D L + G MEKA+ L+  M++ G     +++  LI GFCR 
Sbjct: 566 KETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLK-GFLATTVSYNILIRGFCRL 624

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++EEA  LL  +           Y  +I+  CK   +  AI++   M+    KPD   +
Sbjct: 625 GKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEAIKLWHTMLDKGLKPDTLAY 684

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           S +V      G  E+A++L  ++I
Sbjct: 685 SFLVHGCCIAGELEKAFELRDEMI 708



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/412 (27%), Positives = 202/412 (49%), Gaps = 3/412 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C+ G+   A K+ + M  +   P+ +    +I GL R + + +A ++   M
Sbjct: 299 TYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTYTFTAIISGLCRANMMAEAIRLFGEM 358

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                +P  +TYN+M+ G C+ G I  A  LLDEM   G  PD  TY  ++  +   G+ 
Sbjct: 359 KERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRV 418

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A  F  D  +       + Y+ L+   CK+     A+     M   G + D+V Y  L
Sbjct: 419 SEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAIL 478

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++ + ++        ++  + + G+ P+++ Y  ++      G       + DIM +   
Sbjct: 479 IDGTAREHDTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGC 538

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V TY  LINGLCK GL+D+A     + +  +  P+ +TY   L  L + G + +A+Q
Sbjct: 539 LPNVVTYTALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQ 598

Query: 419 LLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           L H +L G   +   ++YN LI G  + G +E+A  L   M +N I PD IT+ T+I+  
Sbjct: 599 LHHAMLKGFLATT--VSYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQ 656

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           C+   ++EA+ L   +  +G K    AY  ++HG C + +++ A ++ + MI
Sbjct: 657 CKRSNLQEAIKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMI 708



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 102/375 (27%), Positives = 177/375 (47%), Gaps = 26/375 (6%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P+V T + +L  +    +F   +  + D +     P +  Y+ ++  +C+     +A E+
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP-------------- 325
           +  M    C   IV YN L++  CK  +  +A+ + N L+ +G+E               
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNEAEL 213

Query: 326 ------------NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
                       N ITY+ L+ S   RG  D     LD M +AS   TV+ YN LING C
Sbjct: 214 LFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLINGYC 273

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K G    A   F++M+ K   P +VTY +++   C EG  ++A ++ + +     SP   
Sbjct: 274 KLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMTAKGISPNTY 333

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           T+  +I GL +   M +A+ L+G+M E  I P ++T+  +I G CR+  + EA  LL E+
Sbjct: 334 TFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVTYNVMIEGHCRSGNISEAFHLLDEM 393

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
             +G       YR +I GLC   +V  A + ++ +    +K ++  +S +V     +G  
Sbjct: 394 VGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVDDLHKDHHKLNNMCYSALVHGYCKEGRF 453

Query: 554 EEAYKLWQKLIEWKV 568
           ++A    + ++E  V
Sbjct: 454 KDAVSACRVMVERGV 468



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 100/356 (28%), Positives = 171/356 (48%), Gaps = 1/356 (0%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E T N +++  C  G +++A  L+D M  +  +PD +    LI GL  + R+ +A + + 
Sbjct: 367 EVTYNVMIEGHCRSGNISEAFHLLDEMVGKGFVPDTYTYRPLISGLCSVGRVSEAKEFVD 426

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            +       + + Y+ +V G CK G+ + A++    M   G   D++ Y  ++       
Sbjct: 427 DLHKDHHKLNNMCYSALVHGYCKEGRFKDAVSACRVMVERGVAMDLVCYAILIDGTAREH 486

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
             +   G  K+    G  P  + YT +I++  K   +  A  + D M  EGC P++VTY 
Sbjct: 487 DTRALFGLLKEMHNHGLRPDAVIYTNMIDRHSKAGNLKEAFGLWDIMVDEGCLPNVVTYT 546

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L+N  CK G  D A L+    L   + PN ITY   L  L   G  +   ++   M + 
Sbjct: 547 ALINGLCKAGLMDKAELLSKETLVSDVTPNHITYGCFLDHLTRGGNMEKAVQLHHAMLKG 606

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             + TV +YNILI G C+ G ++ A    + M   +  PD +TY+T++   CK   L EA
Sbjct: 607 FLATTV-SYNILIRGFCRLGKIEEATKLLHGMTDNDILPDYITYSTIIYEQCKRSNLQEA 665

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           ++L H +      P  + Y+ L+ G    G +EKA  L  +M+  G+  + +T ++
Sbjct: 666 IKLWHTMLDKGLKPDTLAYSFLVHGCCIAGELEKAFELRDEMIRRGMRSNHVTPKS 721



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 73/293 (24%), Positives = 133/293 (45%), Gaps = 36/293 (12%)

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL--------DIMNEA 356
           Q K D   + I   + RG +   I +N    S   +     VDK+L         +M + 
Sbjct: 33  QDKEDFQFISILTSILRGKQSWRIAFNDPFISRNLKP--SHVDKVLMMLSLNDSRLMKDC 90

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
           +  P V T + L+NGL ++   +  +  F+ +VS N QPDI  Y+ V+ +LC+    N+A
Sbjct: 91  NLMPEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKA 150

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAK----------KGCM----------------EK 450
            +++H +  + C   ++ YN LI GL K          K C+                 +
Sbjct: 151 KEMIHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTYYGKFNE 210

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A +L+ +M E G+  + IT+  LI  FCR  +++ A+  L ++ K   +     Y  +I+
Sbjct: 211 AELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYPYNSLIN 270

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           G CK      A    + MI     P    +++++    ++G   +A+K++ ++
Sbjct: 271 GYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEM 323



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 66/285 (23%), Positives = 130/285 (45%), Gaps = 9/285 (3%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++ T ++L+N   +  +++D +L+ ++++S  ++P+   Y+ ++ SL     ++   ++
Sbjct: 94  PEVRTLSALLNGLLRFRRFNDVLLLFDDIVSANVQPDIYIYSAVVRSLCELKDFNKAKEM 153

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           +  M       ++  YN+LI+GLCK   +  A+   N ++ K  + ++VTY         
Sbjct: 154 IHWMEFNQCKLSIVVYNVLIHGLCKSRRIWEALEIKNCLMQKGLEANVVTY--------- 204

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G  NEA  L   +         ITY+ LID   ++G M+ A+    +M +  I      
Sbjct: 205 YGKFNEAELLFKEMGEKGLCANHITYSILIDSFCRRGEMDNAIGFLDKMTKASIEFTVYP 264

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +LI G+C+      A     E+  +G       Y  +I G C   +   A +V   M 
Sbjct: 265 YNSLINGYCKLGNASAAKYYFDEMIDKGLTPTVVTYTSLISGYCNEGEWHKAFKVYNEMT 324

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +    P+   F+ I+  +    M  EA +L+ ++ E K+     T
Sbjct: 325 AKGISPNTYTFTAIISGLCRANMMAEAIRLFGEMKERKIMPSEVT 369


>gi|224058846|ref|XP_002299640.1| predicted protein [Populus trichocarpa]
 gi|222846898|gb|EEE84445.1| predicted protein [Populus trichocarpa]
          Length = 609

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 117/380 (30%), Positives = 198/380 (52%), Gaps = 2/380 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           PDT+TY+++V    K G+   AI L DEM  +G  P    Y T+L   F +G  ++A+G 
Sbjct: 200 PDTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGL 258

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            ++   KGC P + TYT LI+ + K   +  A  V  +M  +GC PD+V  N+L+N   K
Sbjct: 259 VQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGK 318

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVF 363
            G+ +DA+ + + + S    PN +TYNT++ +L  S+          + M     +P+ F
Sbjct: 319 AGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSF 378

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TY+ILI+G CK   V++A+    +M  K   P    Y +++ AL K      A +L   L
Sbjct: 379 TYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLEL 438

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
             +        Y  +I  L K G   +A+ L+ +M + G +PD   +  L+ G  RA  +
Sbjct: 439 KENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMI 498

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           EEA   L+ + + G     +++ ++++GL ++ + + A ++   M  S  KPD   ++TI
Sbjct: 499 EEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTI 558

Query: 544 VKKVADDGMTEEAYKLWQKL 563
           +  ++  GM EEA KL +++
Sbjct: 559 LGSLSRSGMFEEAAKLMREM 578



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 107/406 (26%), Positives = 202/406 (49%), Gaps = 4/406 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  F   G+   A +L D M      P       L+    +    EKA  ++
Sbjct: 201 DTMTYSVLVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLV 259

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M   G  P   TY  ++ GL K G++  A ++   M   GC+PDV+  N ++      
Sbjct: 260 QEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFGKA 319

Query: 236 GKFKQAIGFWKDQLRK-GCPPYLITYTILIEQVCK-QCGIARAIEVLDDMAIEGCSPDIV 293
           G+ + A+  + DQ+R   C P ++TY  +I+ + + +   + A    + M   G +P   
Sbjct: 320 GRLEDALKLF-DQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSF 378

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY+ L++  CK  + + A+L++  +  +G  P    Y +L+++LG    ++A +++   +
Sbjct: 379 TYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLEL 438

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E     +   Y ++I  L K G    A++ FN+M    C PD+  YN ++  L + GM+
Sbjct: 439 KENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMI 498

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            EA   L  +  + C+P L ++N +++GLA+ G  E+A  ++ +M ++ I PD +++ T+
Sbjct: 499 EEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNTI 558

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           +    R+   EEA  L++E+G RG +  +  Y  ++  + K  + D
Sbjct: 559 LGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDD 604



 Score =  166 bits (421), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 93/348 (26%), Positives = 173/348 (49%), Gaps = 1/348 (0%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           L+  M  +   P       LI+GL +  R+E A  V   M+  G  PD +  N ++    
Sbjct: 258 LVQEMKDKGCAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGCKPDVVLINNLINIFG 317

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGCPPYL 257
           K G++  A+ L D+M    C P+V+TYNT+++ +F++         W ++++  G  P  
Sbjct: 318 KAGRLEDALKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSS 377

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            TY+ILI+  CK   + +A+ +L++M  +G  P    Y SL+N   K  +Y+ A  +   
Sbjct: 378 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLE 437

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           L       ++  Y  ++ +LG  G       + + M +   +P V+ YN L++GL + G+
Sbjct: 438 LKENCGRSSARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGM 497

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           ++ A ++   M    C PD+ ++N +L  L + G   +A ++   +  S   P  ++YNT
Sbjct: 498 IEEAFSALRTMEENGCTPDLNSHNIILNGLARTGRPEQATEMFMKMKDSLIKPDAVSYNT 557

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
           ++  L++ G  E+A  L  +M   G   D IT+ +++    + D+ +E
Sbjct: 558 ILGSLSRSGMFEEAAKLMREMGSRGFEYDHITYSSILEAVGKVDEDDE 605



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 115/425 (27%), Positives = 195/425 (45%), Gaps = 6/425 (1%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG-VPDTITYNMMVGGLCKRGQI 203
           RRN   D    + LIR L       +  K++Q MV S   V      + +V  L K   +
Sbjct: 88  RRNFEHDLTTYMPLIRCLDDCGLFGEMWKMIQEMVRSPTCVIGPADLSEVVKILGKAKMV 147

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG-CPPYLITYTI 262
             A+++  ++    C+P   TYN+++  +   G  ++    + +   +G C P  +TY++
Sbjct: 148 NKALSVFYQIKSRKCKPTASTYNSMILMLMQEGHHEKIHELYHEMCNEGDCFPDTMTYSV 207

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           L+    K      AI + D+M   G  P    Y +L+    K G  + A+ ++  +  +G
Sbjct: 208 LVSAFVKLGRDDYAIRLFDEMKANGLHPTAKIYTTLLAIYFKSGD-EKALGLVQEMKDKG 266

Query: 323 MEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
             P   TY  L+  LG  G   DA    L+++ +    P V   N LIN   K G ++ A
Sbjct: 267 CAPTVFTYTELIKGLGKSGRVEDAYSVFLNMLKDGC-KPDVVLINNLINIFGKAGRLEDA 325

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           +  F+QM S  C P++VTYNTV+ AL + +   +EA      +  +  +P   TY+ LID
Sbjct: 326 LKLFDQMRSLKCAPNVVTYNTVIKALFESKAPASEAASWFEKMKANGVTPSSFTYSILID 385

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  K   +EKA++L  +M E G  P    + +LI    +A + E A +L  E+ +   + 
Sbjct: 386 GFCKTNRVEKALLLLEEMDEKGFPPCPAAYCSLINALGKAKRYEAANELFLELKENCGRS 445

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y ++I  L K  +   A+ +   M      PD   ++ ++  +   GM EEA+   
Sbjct: 446 SARIYAVMIKNLGKCGRPSEAVDLFNEMKKIGCNPDVYAYNALMSGLVRAGMIEEAFSAL 505

Query: 561 QKLIE 565
           + + E
Sbjct: 506 RTMEE 510


>gi|414881815|tpg|DAA58946.1| TPA: hypothetical protein ZEAMMB73_360564 [Zea mays]
          Length = 792

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/453 (26%), Positives = 218/453 (48%), Gaps = 2/453 (0%)

Query: 123 ILQNFCSRGKLTDAS-KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +L   C    +TD + KL   M  +  +P  +    +I+GL+R  R + A  +L+ +V+ 
Sbjct: 331 VLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLK-LVVD 389

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
            GVPD  TY  ++  LCK  ++  A+ L D+M  +G +P ++TY+++L    + G+  +A
Sbjct: 390 TGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEA 449

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +  + +   KG PP  +TYT L++   K+     A  +L++M   G S    TYN L+N 
Sbjct: 450 LKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILING 509

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
                +  +   ++   LS G  P ++TYN++++     G   +   +   M +   +P 
Sbjct: 510 LYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPN 569

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + TY   I+G C+    D A+     +     QPDI  YN  +   CK+G ++ AL  L 
Sbjct: 570 IVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFLV 629

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           LL     +P +  YN+ + G      M +A   Y  M++  +  D   + TLI GF +  
Sbjct: 630 LLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKVG 689

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            V  A++L  E+        +  +  + HGLC+S  +D A ++L+ M      P+   ++
Sbjct: 690 NVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAKRLLDDMRRLDVSPNIVTYN 749

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            ++     DG  +EA++L  +++   V    TT
Sbjct: 750 MLINACVRDGKLQEAFQLHDEMLSSGVVPDDTT 782



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 124/507 (24%), Positives = 225/507 (44%), Gaps = 43/507 (8%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI---PDFHFCINLIRGLIRID 166
           G  V+ DE+     +   C   KL DA + + ++ +  +    P      +++  L+++ 
Sbjct: 213 GAGVKPDERVYAITISGLC---KLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVR 269

Query: 167 RIEKASKVL-QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           R+++A ++  Q+++ +G   D +   M++ G C  G++  A+ L DE+   G  P  +TY
Sbjct: 270 RMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTPTNVTY 329

Query: 226 NTIL----------------RTMFDNG-------------------KFKQAIGFWKDQLR 250
             ++                R M + G                   ++K AIG  K  + 
Sbjct: 330 GVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLLKLVVD 389

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G P  + TY  LI  +CK   +  A+ + D M   G  P IVTY+SL+   C++G+ D+
Sbjct: 390 TGVPD-VFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDE 448

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ + + +  +G  PN +TY TL+     +  +D    +L+ M +   S   +TYNILIN
Sbjct: 449 ALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILIN 508

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GL     V        + +S+   P  +TYN+++    K GM+  A  +   +     +P
Sbjct: 509 GLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITP 568

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            ++TY + IDG  +  C + A+ L   +  +GI PD   +   I  FC+   +  A+  L
Sbjct: 569 NIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFL 628

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
             + K G     + Y   + G    K +  A +    MI  R   D  +++T++   +  
Sbjct: 629 VLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKV 688

Query: 551 GMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           G    A +L+ +++   V     T  A
Sbjct: 689 GNVAFALELYSEMMANHVIPDDKTFTA 715



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 112/434 (25%), Positives = 204/434 (47%), Gaps = 4/434 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D K+   +L          DA  L D M  +    D      +IR  +R      A 
Sbjct: 146 VVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCDAV 205

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M  +G  PD   Y + + GLCK      A+ +L +M  +G EP  +TY++++  +
Sbjct: 206 RLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVDVL 265

Query: 233 FDNGKFKQAIGFWKDQ--LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
               +  +A+   KDQ  L  G    ++  T+L+   C    + +A+++ D++  +G +P
Sbjct: 266 VKVRRMDEALRL-KDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSDGVTP 324

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
             VTY  L+     +G  D+   +   ++ +G+ P++  +N ++  L     W     +L
Sbjct: 325 TNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDAIGLL 384

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
            ++ + +  P VFTY  LI+ LCK+  +  A+N +++M     +P IVTY+++L   C++
Sbjct: 385 KLVVD-TGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEK 443

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G ++EAL+L   +      P  +TY TL+ G  KK   + A  L  +M +NG+S  D T+
Sbjct: 444 GRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTY 503

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             LI G    ++V E  ++LK     G       Y  +I+G  K+  +  A  +   M  
Sbjct: 504 NILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRK 563

Query: 531 SRYKPDDTVFSTIV 544
               P+   +++ +
Sbjct: 564 KGITPNIVTYTSFI 577



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 105/422 (24%), Positives = 189/422 (44%), Gaps = 37/422 (8%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           MV  G VPD  +   ++           A+ L DEM   GC  D   Y+ ++R     G 
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A+  + +    G  P    Y I I  +CK     RA++VL  M   G  P  +TY+S
Sbjct: 201 HCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSS 260

Query: 298 LVNFSCKQGKYDDAVLVINNLL------------------------------------SR 321
           +V+   K  + D+A+ + + +L                                    S 
Sbjct: 261 VVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVVSD 320

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
           G+ P ++TY  L+    + G  D   K+   M E    P+ + +N++I GL +      A
Sbjct: 321 GVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWKDA 380

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           I     +V     PD+ TY  ++  LCK   L+EA+ L   +  +   P ++TY++L+ G
Sbjct: 381 IGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLG 439

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             +KG M++A+ LY +M + G  P+++T+ TL+ G+ +    + A  LL E+ + G    
Sbjct: 440 YCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCG 499

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           +  Y ++I+GL    +V    ++L+  +S  + P    +++I+      GM   A+ +++
Sbjct: 500 DYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYR 559

Query: 562 KL 563
           ++
Sbjct: 560 QM 561



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 181/423 (42%), Gaps = 35/423 (8%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C   KL +A  L D M      P      +L+ G     R+++A K+   M   G
Sbjct: 401 LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TY  ++ G  K+    +A ALL+EM  +G      TYN ++  ++   +  +  
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              K  L +G  P  +TY  +I    K   +  A  +   M  +G +P+IVTY S ++  
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY 580

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+    D AV ++  +   G++P+                                   +
Sbjct: 581 CRTNCCDLAVKLLIYVRRDGIQPD-----------------------------------I 605

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             YN  I+  CK G + RA++    ++     PD+  YN+ +       M+ EA +  + 
Sbjct: 606 AAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYS 665

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +           Y TLIDG +K G +  A+ LY +MM N + PDD T   L  G CR+  
Sbjct: 666 MIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGD 725

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++ A  LL ++ +         Y ++I+   +  K+  A Q+ + M+SS   PDDT +  
Sbjct: 726 IDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDI 785

Query: 543 IVK 545
           + +
Sbjct: 786 LPR 788



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 163/354 (46%), Gaps = 4/354 (1%)

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
            M   G  PD  +   +L T         A+  + +   KGC      Y ++I + C + 
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVI-RACVRG 198

Query: 272 GI-ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           G+   A+ + D+MA  G  PD   Y   ++  CK    D A+ V+  +   G EP  +TY
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPT-VFTYNILINGLCKYGLVDRAINSFNQMV 389
           ++++  L      D   ++ D M  A+     V    +L++G C  G V +A++ F+++V
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEVV 318

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           S    P  VTY  ++     EGM +E  +L   +      P    +N +I GL +    +
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRWK 378

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A+ L   +++ G+ PD  T+  LI   C+  ++ EAV+L  ++ + G K     Y  ++
Sbjct: 379 DAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            G C+  ++D A+++   M    + P++  ++T++K        + AY L  ++
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM 491



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 78/320 (24%), Positives = 146/320 (45%), Gaps = 2/320 (0%)

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           +   + +G  P   + T L+         A A+ + D+M  +GC  D   Y+ ++    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            G + DAV + + +   G++P+   Y   +  L      D   ++L  M EA   P   T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 365 YNILINGLCKYGLVDRAINSFNQM-VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           Y+ +++ L K   +D A+   +QM ++   + D+V    ++   C  G + +AL L   +
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                +P  +TY  LI G   +G  ++   L  QM+E G+ P       +I G  R  + 
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKRW 377

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           ++A+ LLK +   G       Y  +IH LCK +K+  A+ + + M  +  KP    + ++
Sbjct: 378 KDAIGLLKLVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 544 VKKVADDGMTEEAYKLWQKL 563
           +    + G  +EA KL+ ++
Sbjct: 437 LLGYCEKGRMDEALKLYSEM 456



 Score = 92.8 bits (229), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 77/291 (26%), Positives = 137/291 (47%), Gaps = 10/291 (3%)

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSR 340
           M   G  PD  +   L+  +       DA+ + + +  +G   ++  Y+ ++ +   G  
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
            C DAV ++ D M  A   P    Y I I+GLCK    DRA+    +M     +P  +TY
Sbjct: 201 HC-DAV-RLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 401 NTVLGALCKEGMLNEALQL---LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           ++V+  L K   ++EAL+L   + L  G      L T   L+ G    G + KA+ L+ +
Sbjct: 259 SSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLAT--MLMHGYCLNGEVGKALDLFDE 316

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           ++ +G++P ++T+  LI G       +E   L +++ ++G       + LVI GL + K+
Sbjct: 317 VVSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIEQGLLPSTYEFNLVIKGLLRDKR 376

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              AI +L+L++ +   PD   +  ++  +       EA  LW K+ E  V
Sbjct: 377 WKDAIGLLKLVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGV 426



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 79/186 (42%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    N  +  FC +G ++ A   + ++ +    PD     + + G   +  + +AS
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEAS 660

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K    M+    V DT  Y  ++ G  K G +  A+ L  EM  +   PD  T+  +   +
Sbjct: 661 KFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGL 720

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G    A     D  R    P ++TY +LI    +   +  A ++ D+M   G  PD 
Sbjct: 721 CRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDD 780

Query: 293 VTYNSL 298
            TY+ L
Sbjct: 781 TTYDIL 786



 Score = 63.9 bits (154), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 46/217 (21%), Positives = 89/217 (41%), Gaps = 36/217 (16%)

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           +++MV++   PD  +   +L          +AL L   + G  C      Y+ +I    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTALGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR---ADQVEEAVDLLKEIG------- 494
            G    A+ L+ +M   G+ PD+  +   I G C+   AD+  + +  ++E G       
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 495 --------------------------KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
                                       G KM      +++HG C + +V  A+ + + +
Sbjct: 258 YSSVVDVLVKVRRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLNGEVGKALDLFDEV 317

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +S    P +  +  ++K    +GMT+E YKL +++IE
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMTDETYKLCRQMIE 354



 Score = 58.5 bits (140), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 56/119 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D +    ++  F   G +  A +L   M   + IPD      L  GL R   I+ A 
Sbjct: 671 VVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAK 730

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           ++L  M      P+ +TYNM++    + G+++ A  L DEM  SG  PD  TY+ + RT
Sbjct: 731 RLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRT 789


>gi|449521772|ref|XP_004167903.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g61400-like [Cucumis sativus]
          Length = 645

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 116/402 (28%), Positives = 205/402 (50%), Gaps = 13/402 (3%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
            LI G  R   + +A ++   M + G VP  I Y +++ GLC   +I  A ++   M   
Sbjct: 187 TLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREV 246

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P+V TYNT++         KQA+  ++D L +G  P ++T+ ILI+ +CK   +  A
Sbjct: 247 GVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAA 306

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +  +M     +P+I  YNSL++  CK G   +A+ +   L    + P+  TY+ L+  
Sbjct: 307 RNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRG 366

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L S    +    I + M +        TYN LI+G CK G +D+A+   +QM     +P+
Sbjct: 367 LCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPN 426

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           ++T++T++   CK   L  A+ +   +   S SP ++TY  +IDG  K G M++A+ LY 
Sbjct: 427 VITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYS 486

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI-------------GKRGNKMRNS 503
            M++NGI+P+  T   L+ G C+  ++ +A++L  E              G + +   + 
Sbjct: 487 DMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLTNHV 546

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           AY  +IHGLC+  +   A+++   M     +PD+ ++  +++
Sbjct: 547 AYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLR 588



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 114/418 (27%), Positives = 202/418 (48%), Gaps = 13/418 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C +G L  A ++ D M  +  +P       LIRGL   ++IE+A  + + M
Sbjct: 184 TFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAM 243

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+  TYN ++ G CK    + A+ L  +M   G  PDV+T+  ++  +   G+ 
Sbjct: 244 REVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEM 303

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K A   + + ++    P +  Y  LI+  CK   ++ A+ +  ++     SPD+ TY+ L
Sbjct: 304 KAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSIL 363

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C   + ++A  +   +   G+  NS+TYN+L+      G  D   +I   M E   
Sbjct: 364 IRGLCSVSRTEEAGNIFEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGV 423

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V T++ LI+G CK   +  A+  +++MV K+  PD+VTY  ++   CK G + EAL+
Sbjct: 424 EPNVITFSTLIDGYCKIRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALK 483

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME----------NGISP--- 465
           L   +  +  +P   T + L+DGL K G +  A+ L+ + +E           G  P   
Sbjct: 484 LYSDMLDNGITPNCYTISCLLDGLCKDGKISDALELFTEKIEFQTPRCNVDAGGSKPSLT 543

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           + + +  LI G C+  Q  +AV L  ++ + G +     Y +++ GL + K + M + 
Sbjct: 544 NHVAYTALIHGLCQDGQFSKAVKLFSDMRRYGLQPDEVIYVVMLRGLFQVKYILMMLH 601



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 210/448 (46%), Gaps = 3/448 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID-RIEKASKVLQIMV 179
           N ++QN     K   A +L    +  +++    F  N+   LI +  ++E   + L +  
Sbjct: 82  NDLVQNLVKSHKPYHACQLA--FSELSRLKSSKFTPNVYGELIIVLCKMELVEEALSMYH 139

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G        N+++  L K G+      + +EM  +G  P VIT+ T++      G   
Sbjct: 140 KVGAALTIQACNVLLYVLVKTGRFELLWRIYEEMISNGLSPSVITFGTLIDGCCRQGDLL 199

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A   + +   KG  P +I YTILI  +C    I  A  +   M   G  P++ TYN+L+
Sbjct: 200 RAQEMFDEMRVKGIVPTVIVYTILIRGLCSDNKIEEAESMHRAMREVGVYPNVYTYNTLM 259

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK      A+ +  ++L  G+ P+ +T+  L+  L   G   A   +   M + S +
Sbjct: 260 DGYCKLANAKQALRLYQDMLGEGLVPDVVTFGILIDGLCKFGEMKAARNLFVNMIKFSVT 319

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P +  YN LI+  CK G V  A+  F ++      PD+ TY+ ++  LC      EA  +
Sbjct: 320 PNIAVYNSLIDAYCKVGDVSEAMALFLELERFEVSPDVFTYSILIRGLCSVSRTEEAGNI 379

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +         +TYN+LIDG  K+G M+KA+ +  QM ENG+ P+ IT  TLI G+C+
Sbjct: 380 FEKMTKEGILANSVTYNSLIDGCCKEGKMDKALEICSQMTENGVEPNVITFSTLIDGYCK 439

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              ++ A+ +  E+  +        Y  +I G CK   +  A+++   M+ +   P+   
Sbjct: 440 IRNLQAAMGIYSEMVIKSLSPDVVTYTAMIDGHCKYGSMKEALKLYSDMLDNGITPNCYT 499

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWK 567
            S ++  +  DG   +A +L+ + IE++
Sbjct: 500 ISCLLDGLCKDGKISDALELFTEKIEFQ 527



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 73/286 (25%), Positives = 134/286 (46%), Gaps = 5/286 (1%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P++  Y  L+   CK    ++A+ + + +   G        N LL+ L   G ++ + +
Sbjct: 114 TPNV--YGELIIVLCKMELVEEALSMYHKV---GAALTIQACNVLLYVLVKTGRFELLWR 168

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           I + M     SP+V T+  LI+G C+ G + RA   F++M  K   P ++ Y  ++  LC
Sbjct: 169 IYEEMISNGLSPSVITFGTLIDGCCRQGDLLRAQEMFDEMRVKGIVPTVIVYTILIRGLC 228

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
            +  + EA  +   +      P + TYNTL+DG  K    ++A+ LY  M+  G+ PD +
Sbjct: 229 SDNKIEEAESMHRAMREVGVYPNVYTYNTLMDGYCKLANAKQALRLYQDMLGEGLVPDVV 288

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T   LI G C+  +++ A +L   + K       + Y  +I   CK   V  A+ +   +
Sbjct: 289 TFGILIDGLCKFGEMKAARNLFVNMIKFSVTPNIAVYNSLIDAYCKVGDVSEAMALFLEL 348

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
                 PD   +S +++ +     TEEA  +++K+ +  +     T
Sbjct: 349 ERFEVSPDVFTYSILIRGLCSVSRTEEAGNIFEKMTKEGILANSVT 394


>gi|18415314|ref|NP_567587.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|334186696|ref|NP_001190771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|15810161|gb|AAL07224.1| unknown protein [Arabidopsis thaliana]
 gi|332658782|gb|AEE84182.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|332658783|gb|AEE84183.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 825

 Score =  194 bits (494), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 235/488 (48%), Gaps = 39/488 (7%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDI---MARRNQIPDFHFCINLIRGLIRIDRIEK 170
           E   K ++ +++ +C++ K       +D+   +A +   P    C  L+  L+R +  +K
Sbjct: 185 EIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQK 244

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
             +   + V  G  PD   +   +   CK G++  A+ L  +M  +G  P+V+T+NT++ 
Sbjct: 245 CCEAFDV-VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID 303

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +   G++ +A  F +  + +G  P LITY+IL++ + +   I  A  VL +M  +G  P
Sbjct: 304 GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 363

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           +++ YN+L++   + G  + A+ + + ++S+G+   S TYNTL+      G  D  +++L
Sbjct: 364 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 423

Query: 351 DIM-------NEASH----------------------------SPTVFTYNILINGLCKY 375
             M       N+ S                             SP       LI+GLCK+
Sbjct: 424 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 483

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G   +A+  + Q ++K    D  T N +L  LC+ G L+EA ++   + G  C    ++Y
Sbjct: 484 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 543

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           NTLI G   K  +++A +   +M++ G+ PD+ T+  LI G    ++VEEA+    +  +
Sbjct: 544 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 603

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G       Y ++I G CK+++ +   +  + M+S   +P+  V++ +++     G    
Sbjct: 604 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 663

Query: 556 AYKLWQKL 563
           A +L + +
Sbjct: 664 ALELREDM 671



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 211/462 (45%), Gaps = 35/462 (7%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           ++ DA  ++  M ++   P+     NLI   I    + KA ++  +MV  G    + TYN
Sbjct: 345 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 404

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL-----RTMFD------------ 234
            ++ G CK GQ  +A  LL EM   G   +  ++ +++       MFD            
Sbjct: 405 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 464

Query: 235 ------------------NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
                             +GK  +A+  W   L KG      T   L+  +C+   +  A
Sbjct: 465 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 524

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +  ++   GC  D V+YN+L++  C + K D+A + ++ ++ RG++P++ TY+ L+  
Sbjct: 525 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 584

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L +    +   +  D        P V+TY+++I+G CK    +     F++M+SKN QP+
Sbjct: 585 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 644

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            V YN ++ A C+ G L+ AL+L   +     SP   TY +LI G++    +E+A +L+ 
Sbjct: 645 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 704

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M   G+ P+   +  LI G+ +  Q+ +   LL+E+  +        Y ++I G  +  
Sbjct: 705 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 764

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
            V  A ++L  M      PD   +   +      G   EA+K
Sbjct: 765 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 806



 Score =  161 bits (408), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 163/330 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  GK + A +L      +  + D      L+ GL    ++++A ++ + ++  G
Sbjct: 476 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 535

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V D ++YN ++ G C + ++  A   LDEM   G +PD  TY+ ++  +F+  K ++AI
Sbjct: 536 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 595

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            FW D  R G  P + TY+++I+  CK        E  D+M  +   P+ V YN L+   
Sbjct: 596 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 655

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G+   A+ +  ++  +G+ PNS TY +L+  +      +    + + M      P V
Sbjct: 656 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 715

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           F Y  LI+G  K G + +      +M SKN  P+ +TY  ++G   ++G + EA +LL+ 
Sbjct: 716 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 775

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           +      P  ITY   I G  K+G + +A 
Sbjct: 776 MREKGIVPDSITYKEFIYGYLKQGGVLEAF 805



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 172/360 (47%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            CS      A + +  M  RN  P       LI GL +  +  KA ++    +  G V D
Sbjct: 445 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 504

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T N ++ GLC+ G++  A  +  E+   GC  D ++YNT++       K  +A  F  
Sbjct: 505 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 564

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           + +++G  P   TY+ILI  +     +  AI+  DD    G  PD+ TY+ +++  CK  
Sbjct: 565 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 624

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           + ++     + ++S+ ++PN++ YN L+ +    G      ++ + M     SP   TY 
Sbjct: 625 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 684

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI G+     V+ A   F +M  +  +P++  Y  ++    K G + +   LL  ++  
Sbjct: 685 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 744

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           +  P  ITY  +I G A+ G + +A  L  +M E GI PD IT++  I+G+ +   V EA
Sbjct: 745 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 804



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 199/480 (41%), Gaps = 89/480 (18%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVS 216
           L+ GL+    +  A++V+ I +++G VP           +   G   S +A+ D M S+S
Sbjct: 131 LLIGLLLDANLLSAARVVLIRLINGNVP-----------VLPCGLRDSRVAIADAMASLS 179

Query: 217 GCEPDVITYNT------ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
            C  + I          +  T F       A+  +     KG  P   T  IL+  + + 
Sbjct: 180 LCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRA 239

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
               +  E  D +  +G SPD+  + + +N  CK GK ++AV + + +   G+ PN +T+
Sbjct: 240 NEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTF 298

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           NT++  LG  G +D      + M E    PT+ TY+IL+ GL +   +  A     +M  
Sbjct: 299 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 358

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG---- 446
           K   P+++ YN ++ +  + G LN+A+++  L+     S    TYNTLI G  K G    
Sbjct: 359 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 418

Query: 447 ------------------------CM-------EKAMVLYGQMMENGISPDDITHRTLIW 475
                                   C+       + A+   G+M+   +SP      TLI 
Sbjct: 419 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 478

Query: 476 GFCR-----------------------------------ADQVEEAVDLLKEIGKRGNKM 500
           G C+                                   A +++EA  + KEI  RG  M
Sbjct: 479 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 538

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              +Y  +I G C  KK+D A   L+ M+    KPD+  +S ++  + +    EEA + W
Sbjct: 539 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 598



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 143/303 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +T+N +L   C  GKL +A ++   +  R  + D      LI G     ++++A   L
Sbjct: 504 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 563

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  PD  TY++++ GL    ++  AI   D+   +G  PDV TY+ ++      
Sbjct: 564 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 623

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + ++   F+ + + K   P  + Y  LI   C+   ++ A+E+ +DM  +G SP+  TY
Sbjct: 624 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 683

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            SL+       + ++A L+   +   G+EPN   Y  L+   G  G    V+ +L  M+ 
Sbjct: 684 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 743

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P   TY ++I G  + G V  A    N+M  K   PD +TY   +    K+G + E
Sbjct: 744 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 803

Query: 416 ALQ 418
           A +
Sbjct: 804 AFK 806


>gi|115486223|ref|NP_001068255.1| Os11g0607100 [Oryza sativa Japonica Group]
 gi|77551887|gb|ABA94684.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
 gi|113645477|dbj|BAF28618.1| Os11g0607100 [Oryza sativa Japonica Group]
          Length = 671

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 124/451 (27%), Positives = 216/451 (47%), Gaps = 9/451 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID----RIEKASKVLQIM 178
           ++  F   G+L +A+ ++  M R + +P    C+     ++R+         A KV   M
Sbjct: 117 MVAAFGEAGRLPEAADMVLEM-RSHGLP---LCVETANWVLRVGLETGSFVYARKVFDGM 172

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  PD  ++  +V   C+ G++    ALL  M   G   D  T   ++R++ + G+F
Sbjct: 173 TRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRF 232

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K    F++  L  G PP ++ YT  I+ +CK+  + +A  VL++M   G  P++ T+ +L
Sbjct: 233 KDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 292

Query: 299 VNFSCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++  CK G  + A  +   L+ S   +PN  TY  ++      G     + +L  M E  
Sbjct: 293 IDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG 352

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TY  LI G CK G  DRA    N+M  +   P+I TYN V+   CK+G + EA 
Sbjct: 353 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 412

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++L +          ITY  LI    K+G +  A+ L+ +M+ENG  PD   + +LI  +
Sbjct: 413 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 472

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  Q+EE+     +    G       Y  +I G CK  +  +A++V E M+ +    D 
Sbjct: 473 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADS 532

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +  ++  +  +   EEA  L++ +++ ++
Sbjct: 533 ITYGALISGLCKESRLEEAKALYEGMLDKRL 563



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 133/514 (25%), Positives = 239/514 (46%), Gaps = 23/514 (4%)

Query: 54  VSLKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFV 113
           + ++  GLP  +C++  N      W     VL V  +       +K  D    +   P  
Sbjct: 135 LEMRSHGLP--LCVETAN------W-----VLRVGLETGSFVYARKVFDGMTRAGVCP-- 179

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
             DE++   ++   C  GK+ +   L+  M R     D   C  ++R L    R +  S+
Sbjct: 180 --DERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE 237

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
             + M+ +G  P+ + Y   + GLCKR  ++ A  +L+EM   G +P+V T+ T++  + 
Sbjct: 238 FFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLC 297

Query: 234 DNGKFKQAIGFWKDQLRKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             G  ++A   +   ++     P + TYT++I   C++  +ARA  +L  M  +G  P+ 
Sbjct: 298 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 357

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY +L+   CK G +D A  ++N +   G  PN  TYN ++     +G      K+L +
Sbjct: 358 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 417

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
                      TY ILI   CK G +  A++ F++MV   C PDI  Y +++   C++  
Sbjct: 418 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQ 477

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + E+ +           P   TY ++I G  K G    A+ ++ +M++NG   D IT+  
Sbjct: 478 MEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADSITYGA 537

Query: 473 LIWGFCRADQVEEAVDLLKE-IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           LI G C+  ++EEA  L +  + KR      +   L     C+ +K  +A+ VL+ +   
Sbjct: 538 LISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLTFE-YCRREKTSIAVSVLDRL--D 594

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + +   TV   +V+K++  G  + A    +K+++
Sbjct: 595 KRQQVHTV-DVVVRKLSALGDVDAASLFLKKVLD 627



 Score =  171 bits (433), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 207/449 (46%), Gaps = 4/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++++ C +G+  D S+    M      P+       I GL +   +++A  VL
Sbjct: 215 DNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVL 274

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL-LDEMSVSGCEPDVITYNTILRTMFD 234
           + MV  G  P+  T+  ++ GLCK G    A  L L  +  S  +P+V TY  ++     
Sbjct: 275 EEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCR 334

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK  +A       + +G  P   TYT LI   CK     RA E+++ M  EG  P+I T
Sbjct: 335 EGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYT 394

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN++++  CK+GK  +A  V+    S+G++ + ITY  L+     +G       + D M 
Sbjct: 395 YNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMV 454

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E    P +  Y  LI+  C+   ++ +   F++ +     P   TY +++   CK G   
Sbjct: 455 ENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 514

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            AL++   +  + C    ITY  LI GL K+  +E+A  LY  M++  + P ++T  TL 
Sbjct: 515 LALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLT 574

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
           + +CR ++   AV +L  + KR    +     +V+  L     VD A   L+ ++   Y 
Sbjct: 575 FEYCRREKTSIAVSVLDRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYA 631

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            D   ++  +    ++     A ++ +K 
Sbjct: 632 VDHATYTGFINSCYENNRYALASEMSEKF 660


>gi|145336957|ref|NP_176459.2| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75206054|sp|Q9SI78.1|PPR93_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g62720
 gi|6630449|gb|AAF19537.1|AC007190_5 F23N19.8 [Arabidopsis thaliana]
 gi|62320514|dbj|BAD95075.1| PPR-repeat protein [Arabidopsis thaliana]
 gi|332195876|gb|AEE33997.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 485

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 180/352 (51%), Gaps = 3/352 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + ++  FC   ++ DA  L+  M      PD      +I G  +I  +  A +
Sbjct: 136 EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 195

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G   D +TYN +V GLC  G+   A  L+ +M +    P+VIT+  ++    
Sbjct: 196 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 255

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GKF +A+  +++  R+   P + TY  LI  +C    +  A ++LD M  +GC PD+V
Sbjct: 256 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 315

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L+N  CK  + D+   +   +  RG+  ++ITYNT++      G  DA  +I   M
Sbjct: 316 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 375

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +     P + TY+IL+ GLC    V++A+  F  M     + DI TYN V+  +CK G +
Sbjct: 376 DS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 432

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            +A  L   L+     P +++Y T+I G  +K   +K+ +LY +M E+G+ P
Sbjct: 433 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 484



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 195/380 (51%), Gaps = 3/380 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D  +YN+++  LC+  +   A++++ +M   G EPDV+T ++++       +   AI   
Sbjct: 103 DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 162

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
                 G  P ++ Y  +I+  CK   +  A+E+ D M  +G   D VTYNSLV   C  
Sbjct: 163 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 222

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G++ DA  ++ +++ R + PN IT+  ++      G +    K+ + M      P VFTY
Sbjct: 223 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 282

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N LINGLC +G VD A    + MV+K C PD+VTYNT++   CK   ++E  +L   +  
Sbjct: 283 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
                  ITYNT+I G  + G  + A  ++ +M      P+  T+  L++G C   +VE+
Sbjct: 343 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEK 399

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+ L + + K   ++  + Y +VIHG+CK   V+ A  +   +     KPD   ++T++ 
Sbjct: 400 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 459

Query: 546 KVADDGMTEEAYKLWQKLIE 565
                   +++  L++K+ E
Sbjct: 460 GFCRKRQWDKSDLLYRKMQE 479



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 202/386 (52%), Gaps = 3/386 (0%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+ S  +P  + ++ ++  + K       I+L   M V G   D+ +YN ++  +    +
Sbjct: 60  MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 119

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F  A+      ++ G  P ++T + LI   C+   +  AI+++  M   G  PD+V YN+
Sbjct: 120 FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 179

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++ SCK G  +DAV + + +   G+  +++TYN+L+  L   G W    +++  M    
Sbjct: 180 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 239

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V T+  +I+   K G    A+  + +M  +   PD+ TYN+++  LC  G ++EA 
Sbjct: 240 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 299

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           Q+L L+    C P ++TYNTLI+G  K   +++   L+ +M + G+  D IT+ T+I G+
Sbjct: 300 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 359

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +A + + A ++   +  R N      Y ++++GLC + +V+ A+ + E M  S  + D 
Sbjct: 360 FQAGRPDAAQEIFSRMDSRPNI---RTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 416

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
           T ++ ++  +   G  E+A+ L++ L
Sbjct: 417 TTYNIVIHGMCKIGNVEDAWDLFRSL 442



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 183/362 (50%), Gaps = 3/362 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I  L R  R   A  V+  M+  G  PD +T + ++ G C+  ++  AI L+ +M   G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PDV+ YNTI+      G    A+  +    R G     +TY  L+  +C     + A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            ++ DM +    P+++T+ ++++   K+GK+ +A+ +   +  R ++P+  TYN+L++ L
Sbjct: 230 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 289

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D   ++LD+M      P V TYN LING CK   VD     F +M  +    D 
Sbjct: 290 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 349

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +TYNT++    + G  + A ++   ++     P + TY+ L+ GL     +EKA+VL+  
Sbjct: 350 ITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFEN 406

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M ++ I  D  T+  +I G C+   VE+A DL + +  +G K    +Y  +I G C+ ++
Sbjct: 407 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 466

Query: 518 VD 519
            D
Sbjct: 467 WD 468



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 196/385 (50%), Gaps = 3/385 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  + N ++   C   +   A  ++  M +    PD     +LI G  + +R+  A 
Sbjct: 100 IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 159

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M   G  PD + YN ++ G CK G +  A+ L D M   G   D +TYN+++  +
Sbjct: 160 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 219

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G++  A    +D + +   P +IT+T +I+   K+   + A+++ ++M      PD+
Sbjct: 220 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 279

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYNSL+N  C  G+ D+A  +++ ++++G  P+ +TYNTL++        D   K+   
Sbjct: 280 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 339

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +        TYN +I G  + G  D A   F++M S+   P+I TY+ +L  LC    
Sbjct: 340 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWR 396

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +AL L   +  S     + TYN +I G+ K G +E A  L+  +   G+ PD +++ T
Sbjct: 397 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 456

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           +I GFCR  Q +++  L +++ + G
Sbjct: 457 MISGFCRKRQWDKSDLLYRKMQEDG 481



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 127/276 (46%), Gaps = 35/276 (12%)

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P+ + ++ +L  +     +D V  +   M        +++YNI+IN LC+      A++ 
Sbjct: 67  PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 126

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M+    +PD+VT ++++   C+   + +A+ L+  +      P ++ YNT+IDG  K
Sbjct: 127 VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 186

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC-------------------------- 478
            G +  A+ L+ +M  +G+  D +T+ +L+ G C                          
Sbjct: 187 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 246

Query: 479 ---------RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
                    +  +  EA+ L +E+ +R        Y  +I+GLC   +VD A Q+L+LM+
Sbjct: 247 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 306

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +    PD   ++T++         +E  KL++++ +
Sbjct: 307 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 342



 Score = 79.0 bits (193), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 49/200 (24%), Positives = 98/200 (49%)

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           ++  I+ F +M+     P IV ++ VL  + K    +  + L H +        L +YN 
Sbjct: 50  LEEEIDLFCKMIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNI 109

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +I+ L +      A+ + G+MM+ G  PD +T  +LI GFC+ ++V +A+DL+ ++ + G
Sbjct: 110 VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 169

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            +     Y  +I G CK   V+ A+++ + M     + D   ++++V  +   G   +A 
Sbjct: 170 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 229

Query: 558 KLWQKLIEWKVFEKGTTLLA 577
           +L + ++   +     T  A
Sbjct: 230 RLMRDMVMRDIVPNVITFTA 249


>gi|224111844|ref|XP_002316000.1| predicted protein [Populus trichocarpa]
 gi|222865040|gb|EEF02171.1| predicted protein [Populus trichocarpa]
          Length = 745

 Score =  194 bits (494), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 133/502 (26%), Positives = 239/502 (47%), Gaps = 37/502 (7%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L  +DG        + N I+  +C  G    A     +M +   +PD +    LI GLI 
Sbjct: 173 LRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIV 232

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVI 223
              +E+A ++   M   G  PD +TY ++  G    G +  A  ++ +M +  G +PD++
Sbjct: 233 AGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLV 292

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           TY  ++      G  ++A+   +D L  G    +I Y++L+  +CK+  +  A+++L +M
Sbjct: 293 TYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEM 352

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
                 PD+VTY+ L++  CKQGK   A+ +   +    + PNS  ++ +L  L  +G  
Sbjct: 353 EANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGML 412

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN---------------SFNQM 388
                  D +  ++  P V  YNI+I+G  K G V+ A+                +FN +
Sbjct: 413 SDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSL 472

Query: 389 VSKNC--------------------QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           +   C                    +P  VTY T++ A C+EG +N+  +LL  +N    
Sbjct: 473 IYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDI 532

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P ++TY  +I GL K+  +E+++ L   M   G++PD IT+ T+I  FC+A  + +A +
Sbjct: 533 EPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFE 592

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           LL ++     +   + Y ++I GLC+   V+ A +VL  +           ++T++K   
Sbjct: 593 LLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHC 652

Query: 549 DDGMTEEAYKLWQKLIEWKVFE 570
             G  + A K++ +++E K FE
Sbjct: 653 VKGDAQRAVKVFHQMVE-KGFE 673



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 224/440 (50%), Gaps = 2/440 (0%)

Query: 128 CSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           C  G + +A +L  D+++   Q+    + + L+  L +  ++++A ++L  M  +   PD
Sbjct: 302 CQMGNIEEALRLRRDLLSSGFQLNVILYSV-LLSSLCKRGQVDEALQLLYEMEANNLQPD 360

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            +TY++++ GLCK+G+++ AI L  EM  +   P+   ++ IL+ + + G    A  ++ 
Sbjct: 361 LVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFD 420

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             +     P +  Y I+I+   K   +  A+ +   +  +  +P IVT+NSL+   CK  
Sbjct: 421 SLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNR 480

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K  +A  ++ ++   G+EP+++TY TL+++    G  + + ++L  MN     PTV TY 
Sbjct: 481 KVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYT 540

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           ++I GLCK   ++ ++     M +K   PD +TYNT++   CK   + +A +LL  +   
Sbjct: 541 VVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDDMLIH 600

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           +  P   TYN LIDGL + G +E A  +   + +  I+   + + T+I   C     + A
Sbjct: 601 NLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGDAQRA 660

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           V +  ++ ++G ++    Y  VI+ LCK   ++ A     +M+S    PD  +F  ++  
Sbjct: 661 VKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEMMLNA 720

Query: 547 VADDGMTEEAYKLWQKLIEW 566
               G     ++L   +I++
Sbjct: 721 FHRAGHVHSVFELLAVMIKF 740



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/452 (25%), Positives = 230/452 (50%), Gaps = 9/452 (1%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCI----NLIRGLIRIDRIEKASK 173
           +T++ I+   C + +  DA     +  R+N   +F   +     ++    ++   + A  
Sbjct: 151 RTSSIIVDGLCGQSRFRDAV----LFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKS 206

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
              +M+  G +PDT +YN+++ GL   G +  A+ L ++M   G +PD++TY  + +   
Sbjct: 207 FFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFH 266

Query: 234 DNGKFKQAIGFWKDQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             G    A    +  L  +G  P L+TYT+LI   C+   I  A+ +  D+   G   ++
Sbjct: 267 LLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNV 326

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + Y+ L++  CK+G+ D+A+ ++  + +  ++P+ +TY+ L+H L  +G      ++   
Sbjct: 327 ILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKE 386

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P  F ++ ++ GLC+ G++  A   F+ ++  N +PD+  YN ++    K G 
Sbjct: 387 MCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGD 446

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + EA++L   L   + +P ++T+N+LI G  K   + +A  L   +  +G+ P  +T+ T
Sbjct: 447 VEEAVRLYKRLRDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTT 506

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+  +C    + +  +LL E+  +  +     Y +VI GLCK +K++ ++Q+LE M +  
Sbjct: 507 LMNAYCEEGNINKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKG 566

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             PD   ++TI++         +A++L   ++
Sbjct: 567 LAPDQITYNTIIQCFCKAKDMRKAFELLDDML 598



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/385 (26%), Positives = 185/385 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T + ++   C +GK+  A +L   M      P+      +++GL     +  A 
Sbjct: 357 LQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDAR 416

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
                ++MS   PD   YN+M+ G  K G +  A+ L   +      P ++T+N+++   
Sbjct: 417 MYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRLRDKAITPSIVTFNSLIYGF 476

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N K  +A    +     G  P  +TYT L+   C++  I +  E+L +M ++   P +
Sbjct: 477 CKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNINKLHELLLEMNLKDIEPTV 536

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY  ++   CKQ K +++V ++ ++ ++G+ P+ ITYNT++             ++LD 
Sbjct: 537 VTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTIIQCFCKAKDMRKAFELLDD 596

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M   +  PT  TYN+LI+GLC+YG V+ A      +  +N     V Y T++ A C +G 
Sbjct: 597 MLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNINLTKVAYTTMIKAHCVKGD 656

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
              A+++ H +        +  Y+ +I+ L K+  + +A   +  M+ +G+SPD      
Sbjct: 657 AQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKYYFCIMLSDGVSPDQEIFEM 716

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           ++  F RA  V    +LL  + K G
Sbjct: 717 MLNAFHRAGHVHSVFELLAVMIKFG 741



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 91/348 (26%), Positives = 173/348 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            ++ IL+  C +G L+DA    D +   N  PD      +I G +++  +E+A ++ + +
Sbjct: 398 AHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYKRL 457

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P  +T+N ++ G CK  ++  A  LL+ + + G EP  +TY T++    + G  
Sbjct: 458 RDKAITPSIVTFNSLIYGFCKNRKVVEARRLLESIKLHGLEPSAVTYTTLMNAYCEEGNI 517

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +      +   K   P ++TYT++I+ +CKQ  +  ++++L+DM  +G +PD +TYN++
Sbjct: 518 NKLHELLLEMNLKDIEPTVVTYTVVIKGLCKQRKLEESVQLLEDMRAKGLAPDQITYNTI 577

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK      A  +++++L   +EP   TYN L+  L   G  +  D++L  + + + 
Sbjct: 578 IQCFCKAKDMRKAFELLDDMLIHNLEPTPATYNVLIDGLCRYGDVEDADRVLVSLQDRNI 637

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           + T   Y  +I   C  G   RA+  F+QMV K  +  I  Y+ V+  LCK  ++NEA  
Sbjct: 638 NLTKVAYTTMIKAHCVKGDAQRAVKVFHQMVEKGFEVSIKDYSAVINRLCKRCLINEAKY 697

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
              ++     SP    +  +++   + G +     L   M++ G+  D
Sbjct: 698 YFCIMLSDGVSPDQEIFEMMLNAFHRAGHVHSVFELLAVMIKFGLLHD 745



 Score =  145 bits (366), Expect = 6e-32,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 180/362 (49%), Gaps = 4/362 (1%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           +  A+ +L +M      P + TYN++L  +             KD    G P    T +I
Sbjct: 99  VHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKD---SGTPQSARTSSI 155

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           +++ +C Q     A+  L     +  +P +V++N++++  CK G  D A      +L  G
Sbjct: 156 IVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYG 215

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + P++ +YN L+H L   G  +   ++ + M +    P + TY I+  G    GL+  A 
Sbjct: 216 ILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAR 275

Query: 383 NSFNQMVS-KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
               +M++ +  +PD+VTY  ++   C+ G + EAL+L   L  S     +I Y+ L+  
Sbjct: 276 EIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLLSSGFQLNVILYSVLLSS 335

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
           L K+G +++A+ L  +M  N + PD +T+  LI G C+  +V++A+ L KE+        
Sbjct: 336 LCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQGKVQQAIQLYKEMCFNRIFPN 395

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           + A+  ++ GLC+   +  A    + +I S  +PD T+++ ++      G  EEA +L++
Sbjct: 396 SFAHSGILKGLCEKGMLSDARMYFDSLIMSNLRPDVTLYNIMIDGYVKLGDVEEAVRLYK 455

Query: 562 KL 563
           +L
Sbjct: 456 RL 457



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 84/288 (29%), Positives = 144/288 (50%), Gaps = 1/288 (0%)

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +V +D+   G      T + +V+  C Q ++ DAVL +     +   P+ +++NT++   
Sbjct: 136 DVYNDIKDSGTPQSARTSSIIVDGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRY 195

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D       +M +    P  ++YNILI+GL   G ++ A+   N M  +  QPD+
Sbjct: 196 CKLGLADVAKSFFCMMLKYGILPDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDM 255

Query: 398 VTYNTVLGALCKEGMLNEALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           VTY  V       G+++ A +++  +L      P L+TY  LI G  + G +E+A+ L  
Sbjct: 256 VTYKIVAKGFHLLGLMSGAREIIQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRR 315

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            ++ +G   + I +  L+   C+  QV+EA+ LL E+     +     Y ++IHGLCK  
Sbjct: 316 DLLSSGFQLNVILYSVLLSSLCKRGQVDEALQLLYEMEANNLQPDLVTYSILIHGLCKQG 375

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           KV  AIQ+ + M  +R  P+    S I+K + + GM  +A   +  LI
Sbjct: 376 KVQQAIQLYKEMCFNRIFPNSFAHSGILKGLCEKGMLSDARMYFDSLI 423



 Score = 65.9 bits (159), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 50/221 (22%), Positives = 97/221 (43%), Gaps = 33/221 (14%)

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVL-------------------------------- 404
           +V  A+    +M  +N +P I TYN++L                                
Sbjct: 98  MVHDALFVLVKMKEQNLRPSIQTYNSLLYNLRHTDIMWDVYNDIKDSGTPQSARTSSIIV 157

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LC +    +A+  L   +G   +P ++++NT++    K G  + A   +  M++ GI 
Sbjct: 158 DGLCGQSRFRDAVLFLRQNDGKEFAPSVVSFNTIMSRYCKLGLADVAKSFFCMMLKYGIL 217

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD  ++  LI G   A  +EEA++L  ++ K+G +     Y++V  G      +  A ++
Sbjct: 218 PDTYSYNILIHGLIVAGSMEEALELTNDMEKQGLQPDMVTYKIVAKGFHLLGLMSGAREI 277

Query: 525 LELMISSR-YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           ++ M++    KPD   ++ ++      G  EEA +L + L+
Sbjct: 278 IQKMLTDEGLKPDLVTYTVLICGHCQMGNIEEALRLRRDLL 318


>gi|297738285|emb|CBI27486.3| unnamed protein product [Vitis vinifera]
          Length = 509

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 127/445 (28%), Positives = 213/445 (47%), Gaps = 12/445 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G L  A  L   M      PD     +LI G  ++  +++   + + M
Sbjct: 58  TYNIMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQM 117

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +   PD ITYN ++   CK  ++  A   L EM  +G +P+V+TY+T +      G  
Sbjct: 118 KDADCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGML 177

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++AI F+ D  R    P   TYT LI+  CK   +A A+++++++   G   ++VTY +L
Sbjct: 178 QEAIKFFVDMRRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTAL 237

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C++G+  +A  V   +L+ G+ PN  TY  L+H        +    IL  M E   
Sbjct: 238 LDGLCEEGRMKEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCI 297

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +  Y  ++ GLC    ++ A     ++       + V Y T++ A  K G   EAL 
Sbjct: 298 KPDLLLYGTILWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALT 357

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +              L+DGL K  C E A  L+ +M++ G+ PD I +  LI G  
Sbjct: 358 LLEEM------------LDLVDGLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNM 405

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +   ++EA++L   + + G ++   AY  +I GL  S +V  A  +L+ MI     PD+ 
Sbjct: 406 KHGNLQEALNLRDRMIEIGMELDLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEV 465

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
           V+  ++KK    G  +EA +L  ++
Sbjct: 466 VYMCLIKKYYALGKVDEALELQNEM 490



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 83/368 (22%), Positives = 161/368 (43%), Gaps = 23/368 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC   ++  A + +  M      P+       I    +   +++A K    M
Sbjct: 128 TYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEAIKFFVDM 187

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+  TY  ++   CK G +  A+ L++E+  +G + +V+TY  +L  + + G+ 
Sbjct: 188 RRVALTPNEFTYTSLIDANCKAGNLAEALKLVEEILQAGIKLNVVTYTALLDGLCEEGRM 247

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A   ++  L  G  P   TYT L+    K   +  A ++L +M  +   PD++ Y ++
Sbjct: 248 KEAEEVFRAMLNAGVAPNQETYTALVHGFIKAKEMEYAKDILKEMKEKCIKPDLLLYGTI 307

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG----------------- 341
           +   C + + ++A L+I  +   G+  N++ Y TL+ +    G                 
Sbjct: 308 LWGLCNESRLEEAKLLIGEIKESGINTNAVIYTTLMDAYFKSGQATEALTLLEEMLDLVD 367

Query: 342 ------CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                 C++   K+ D M +    P    Y  LI+G  K+G +  A+N  ++M+    + 
Sbjct: 368 GLCKNNCFEVAKKLFDEMLDKGMMPDKIAYTALIDGNMKHGNLQEALNLRDRMIEIGMEL 427

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D+  Y  ++  L   G + +A  LL  + G    P  + Y  LI      G +++A+ L 
Sbjct: 428 DLHAYTALIWGLSHSGQVQKARNLLDEMIGKGVLPDEVVYMCLIKKYYALGKVDEALELQ 487

Query: 456 GQMMENGI 463
            +M + G+
Sbjct: 488 NEMAKRGM 495



 Score = 73.6 bits (179), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 47/184 (25%), Positives = 89/184 (48%)

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
           +++ A   F +M      P   + N +L  L K G  + + +    +  +     + TYN
Sbjct: 1   MLEEASECFLKMRKFRVFPKPRSCNALLHRLSKVGRGDLSRKFFKDMGAAGIKRSVFTYN 60

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            +ID L K+G +E A  L+ QM E G +PD +T+ +LI G  +   ++E + + +++   
Sbjct: 61  IMIDYLCKEGDLEMARSLFTQMKEAGFTPDIVTYNSLIDGHGKLGLLDECICIFEQMKDA 120

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                   Y  +I+  CK +++  A + L  M ++  KP+   +ST +     +GM +EA
Sbjct: 121 DCDPDVITYNALINCFCKFERMPKAFEFLHEMKANGLKPNVVTYSTFIDAFCKEGMLQEA 180

Query: 557 YKLW 560
            K +
Sbjct: 181 IKFF 184


>gi|223635621|sp|Q940A6.2|PP325_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g19440, chloroplastic; Flags: Precursor
          Length = 838

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 235/488 (48%), Gaps = 39/488 (7%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDI---MARRNQIPDFHFCINLIRGLIRIDRIEK 170
           E   K ++ +++ +C++ K       +D+   +A +   P    C  L+  L+R +  +K
Sbjct: 198 EIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQK 257

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
             +   + V  G  PD   +   +   CK G++  A+ L  +M  +G  P+V+T+NT++ 
Sbjct: 258 CCEAFDV-VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID 316

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +   G++ +A  F +  + +G  P LITY+IL++ + +   I  A  VL +M  +G  P
Sbjct: 317 GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 376

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           +++ YN+L++   + G  + A+ + + ++S+G+   S TYNTL+      G  D  +++L
Sbjct: 377 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 436

Query: 351 DIM-------NEASH----------------------------SPTVFTYNILINGLCKY 375
             M       N+ S                             SP       LI+GLCK+
Sbjct: 437 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 496

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G   +A+  + Q ++K    D  T N +L  LC+ G L+EA ++   + G  C    ++Y
Sbjct: 497 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 556

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           NTLI G   K  +++A +   +M++ G+ PD+ T+  LI G    ++VEEA+    +  +
Sbjct: 557 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 616

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G       Y ++I G CK+++ +   +  + M+S   +P+  V++ +++     G    
Sbjct: 617 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 676

Query: 556 AYKLWQKL 563
           A +L + +
Sbjct: 677 ALELREDM 684



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 211/462 (45%), Gaps = 35/462 (7%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           ++ DA  ++  M ++   P+     NLI   I    + KA ++  +MV  G    + TYN
Sbjct: 358 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 417

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL-----RTMFD------------ 234
            ++ G CK GQ  +A  LL EM   G   +  ++ +++       MFD            
Sbjct: 418 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 477

Query: 235 ------------------NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
                             +GK  +A+  W   L KG      T   L+  +C+   +  A
Sbjct: 478 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 537

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +  ++   GC  D V+YN+L++  C + K D+A + ++ ++ RG++P++ TY+ L+  
Sbjct: 538 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 597

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L +    +   +  D        P V+TY+++I+G CK    +     F++M+SKN QP+
Sbjct: 598 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 657

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            V YN ++ A C+ G L+ AL+L   +     SP   TY +LI G++    +E+A +L+ 
Sbjct: 658 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 717

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M   G+ P+   +  LI G+ +  Q+ +   LL+E+  +        Y ++I G  +  
Sbjct: 718 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 777

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
            V  A ++L  M      PD   +   +      G   EA+K
Sbjct: 778 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 819



 Score =  161 bits (408), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 163/330 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  GK + A +L      +  + D      L+ GL    ++++A ++ + ++  G
Sbjct: 489 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 548

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V D ++YN ++ G C + ++  A   LDEM   G +PD  TY+ ++  +F+  K ++AI
Sbjct: 549 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 608

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            FW D  R G  P + TY+++I+  CK        E  D+M  +   P+ V YN L+   
Sbjct: 609 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 668

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G+   A+ +  ++  +G+ PNS TY +L+  +      +    + + M      P V
Sbjct: 669 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 728

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           F Y  LI+G  K G + +      +M SKN  P+ +TY  ++G   ++G + EA +LL+ 
Sbjct: 729 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 788

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           +      P  ITY   I G  K+G + +A 
Sbjct: 789 MREKGIVPDSITYKEFIYGYLKQGGVLEAF 818



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 172/360 (47%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            CS      A + +  M  RN  P       LI GL +  +  KA ++    +  G V D
Sbjct: 458 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 517

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T N ++ GLC+ G++  A  +  E+   GC  D ++YNT++       K  +A  F  
Sbjct: 518 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 577

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           + +++G  P   TY+ILI  +     +  AI+  DD    G  PD+ TY+ +++  CK  
Sbjct: 578 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 637

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           + ++     + ++S+ ++PN++ YN L+ +    G      ++ + M     SP   TY 
Sbjct: 638 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 697

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI G+     V+ A   F +M  +  +P++  Y  ++    K G + +   LL  ++  
Sbjct: 698 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 757

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           +  P  ITY  +I G A+ G + +A  L  +M E GI PD IT++  I+G+ +   V EA
Sbjct: 758 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 817



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 199/480 (41%), Gaps = 89/480 (18%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVS 216
           L+ GL+    +  A++V+ I +++G VP           +   G   S +A+ D M S+S
Sbjct: 144 LLIGLLLDANLLSAARVVLIRLINGNVP-----------VLPCGLRDSRVAIADAMASLS 192

Query: 217 GCEPDVITYNT------ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
            C  + I          +  T F       A+  +     KG  P   T  IL+  + + 
Sbjct: 193 LCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRA 252

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
               +  E  D +  +G SPD+  + + +N  CK GK ++AV + + +   G+ PN +T+
Sbjct: 253 NEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTF 311

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           NT++  LG  G +D      + M E    PT+ TY+IL+ GL +   +  A     +M  
Sbjct: 312 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 371

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG---- 446
           K   P+++ YN ++ +  + G LN+A+++  L+     S    TYNTLI G  K G    
Sbjct: 372 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 431

Query: 447 ------------------------CM-------EKAMVLYGQMMENGISPDDITHRTLIW 475
                                   C+       + A+   G+M+   +SP      TLI 
Sbjct: 432 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 491

Query: 476 GFCR-----------------------------------ADQVEEAVDLLKEIGKRGNKM 500
           G C+                                   A +++EA  + KEI  RG  M
Sbjct: 492 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 551

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              +Y  +I G C  KK+D A   L+ M+    KPD+  +S ++  + +    EEA + W
Sbjct: 552 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 611



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 143/303 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +T+N +L   C  GKL +A ++   +  R  + D      LI G     ++++A   L
Sbjct: 517 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 576

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  PD  TY++++ GL    ++  AI   D+   +G  PDV TY+ ++      
Sbjct: 577 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 636

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + ++   F+ + + K   P  + Y  LI   C+   ++ A+E+ +DM  +G SP+  TY
Sbjct: 637 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 696

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            SL+       + ++A L+   +   G+EPN   Y  L+   G  G    V+ +L  M+ 
Sbjct: 697 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 756

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P   TY ++I G  + G V  A    N+M  K   PD +TY   +    K+G + E
Sbjct: 757 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 816

Query: 416 ALQ 418
           A +
Sbjct: 817 AFK 819


>gi|326514834|dbj|BAJ99778.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 609

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 222/448 (49%), Gaps = 5/448 (1%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP--DFHFCINLIRGLIRIDRI 168
           PF   D  T N  L   C  G++  A+ L ++M R  +I   D      L+ G  +   +
Sbjct: 161 PF---DAVTVNTALVALCRDGQVEGAAALAEMMVRGREIHRLDVVGWNALLDGYCKSGDM 217

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E A    Q M   G   D + YN +V GLC+ G+  +A  +L+ M   G EP+V+TY T 
Sbjct: 218 EAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTF 277

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +           A   +++ +R G  P ++T + L++ +C+    + A  +  +M   G 
Sbjct: 278 IAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSEAYALFREMEKIGA 337

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P+ VTY +L++   K  +  ++  ++  ++SRG+  + + Y +L+  LG +G  D V  
Sbjct: 338 APNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKD 397

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +       +H+P   TY +LI+ LC+ G VD A     +M  K+  P++VT+++++  L 
Sbjct: 398 MFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLT 457

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K+G+L +A   +  +      P ++TY T++DG  K    E A+ LY +M+  G+  +  
Sbjct: 458 KQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKF 517

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
               L+ G  +  ++EEA  L +++ KRG  + +  Y  +I GL K   +  A +V + +
Sbjct: 518 IVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQEL 577

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                 PD  V++  V  +   G ++EA
Sbjct: 578 TERNLSPDAVVYNVFVNCLCMLGKSKEA 605



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 123/458 (26%), Positives = 224/458 (48%), Gaps = 13/458 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTD-ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           D  + N ++     +G+    A  L+  M +R    D       +  L R  ++E A+ +
Sbjct: 127 DTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTALVALCRDGQVEGAAAL 186

Query: 175 LQIMVMSGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++MV    +   D + +N ++ G CK G + +A+     M   G   DV+ YNT++  +
Sbjct: 187 AEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGL 246

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A G  +     G  P ++TYT  I + C+   +  A  + ++M   G  PD+
Sbjct: 247 CRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDV 306

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV--DKIL 350
           VT ++LV+  C+ G++ +A  +   +   G  PN +TY TL+ SL     W A    +  
Sbjct: 307 VTLSALVDGLCRAGRFSEAYALFREMEKIGAAPNHVTYCTLIDSL-----WKARRGSESH 361

Query: 351 DIMNEASHSPTVF---TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            ++ E      V     Y  L++ L K G +D   + F+  +S N  P+ VTY  ++ AL
Sbjct: 362 GLLGEVVSRGVVMDLVMYTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDAL 421

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C+ G ++ A Q+L  +   S  P ++T++++I+GL K+G + KA     +M E GI P+ 
Sbjct: 422 CRAGNVDGAEQMLLEMEDKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNV 481

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+ T++ GF +  + E A+DL  E+   G ++      L+++GL K+ K++ A  +   
Sbjct: 482 VTYGTVMDGFFKCQEQESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRD 541

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           M       D   ++T++  +   G    A+K+ Q+L E
Sbjct: 542 MNKRGMLLDHVNYTTLIDGLFKMGNMPAAFKVGQELTE 579



 Score =  154 bits (390), Expect = 9e-35,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 180/405 (44%), Gaps = 35/405 (8%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L  +C  G +  A      M  +    D      L+ GL R    + A  +L+ M  
Sbjct: 205 NALLDGYCKSGDMEAALTAAQRMRTQGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKG 264

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +TY   +   C+   +  A +L +EM   G  PDV+T + ++  +   G+F +
Sbjct: 265 DGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCRAGRFSE 324

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   +++  + G  P  +TY  LI+ + K    + +  +L ++   G   D+V Y SL++
Sbjct: 325 AYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVMYTSLMD 384

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
           +  KQGK D+   + +  LS    PN +TY  L+ +L   G  D  +++L  M + S  P
Sbjct: 385 WLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEMEDKSVHP 444

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA-------------- 406
            V T++ +INGL K GL+ +A +   +M  +   P++VTY TV+                
Sbjct: 445 NVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMDGFFKCQEQESALDLY 504

Query: 407 ---LC------------------KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
              LC                  K G + EA  L   +N        + Y TLIDGL K 
Sbjct: 505 HEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYTTLIDGLFKM 564

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
           G M  A  +  ++ E  +SPD + +   +   C   + +EA  +L
Sbjct: 565 GNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEAESIL 609



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 92/350 (26%), Positives = 161/350 (46%), Gaps = 6/350 (1%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L +  G  VE +  T    +   C    + DA  L + M R   +PD      L+ GL R
Sbjct: 259 LETMKGDGVEPNVVTYTTFIAECCRTNAVDDAFSLYEEMVRMGVLPDVVTLSALVDGLCR 318

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
             R  +A  + + M   G  P+ +TY  ++  L K  +   +  LL E+   G   D++ 
Sbjct: 319 AGRFSEAYALFREMEKIGAAPNHVTYCTLIDSLWKARRGSESHGLLGEVVSRGVVMDLVM 378

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y +++  +   GK  +    +   L     P  +TYT+LI+ +C+   +  A ++L +M 
Sbjct: 379 YTSLMDWLGKQGKIDEVKDMFHCALSDNHTPNGVTYTVLIDALCRAGNVDGAEQMLLEME 438

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +   P++VT++S++N   KQG    A   +  +  RG++PN +TY T++   G   C +
Sbjct: 439 DKSVHPNVVTFSSIINGLTKQGLLGKAADYMRKMKERGIDPNVVTYGTVMD--GFFKCQE 496

Query: 345 AVDKILDIMNE---ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             +  LD+ +E          F  ++L+NGL K G ++ A   F  M  +    D V Y 
Sbjct: 497 Q-ESALDLYHEMLCEGVEVNKFIVDLLVNGLRKNGKMEEAEALFRDMNKRGMLLDHVNYT 555

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
           T++  L K G +  A ++   L   + SP  + YN  ++ L   G  ++A
Sbjct: 556 TLIDGLFKMGNMPAAFKVGQELTERNLSPDAVVYNVFVNCLCMLGKSKEA 605



 Score = 59.7 bits (143), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/202 (22%), Positives = 92/202 (45%), Gaps = 5/202 (2%)

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE-ALQLLHLLNGSSCSPCLITYNTL 438
           R++     ++  +   D V+YN V+  L ++G     A  LL  +         +T NT 
Sbjct: 111 RSLRPALALLRASESADTVSYNVVISGLTEQGRHGGLAPALLAEMCKRGVPFDAVTVNTA 170

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISP---DDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           +  L + G +E A  L  +MM  G      D +    L+ G+C++  +E A+   + +  
Sbjct: 171 LVALCRDGQVEGAAAL-AEMMVRGREIHRLDVVGWNALLDGYCKSGDMEAALTAAQRMRT 229

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           +G  +    Y  ++ GLC++ + D A  +LE M     +P+   ++T + +       ++
Sbjct: 230 QGVGVDVVGYNTLVAGLCRAGEADAARGMLETMKGDGVEPNVVTYTTFIAECCRTNAVDD 289

Query: 556 AYKLWQKLIEWKVFEKGTTLLA 577
           A+ L+++++   V     TL A
Sbjct: 290 AFSLYEEMVRMGVLPDVVTLSA 311


>gi|3080374|emb|CAA18631.1| putative protein [Arabidopsis thaliana]
 gi|7268739|emb|CAB78946.1| putative protein [Arabidopsis thaliana]
          Length = 814

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/488 (25%), Positives = 235/488 (48%), Gaps = 39/488 (7%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDI---MARRNQIPDFHFCINLIRGLIRIDRIEK 170
           E   K ++ +++ +C++ K       +D+   +A +   P    C  L+  L+R +  +K
Sbjct: 174 EIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRANEFQK 233

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
             +   + V  G  PD   +   +   CK G++  A+ L  +M  +G  P+V+T+NT++ 
Sbjct: 234 CCEAFDV-VCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTFNTVID 292

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +   G++ +A  F +  + +G  P LITY+IL++ + +   I  A  VL +M  +G  P
Sbjct: 293 GLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTKKGFPP 352

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           +++ YN+L++   + G  + A+ + + ++S+G+   S TYNTL+      G  D  +++L
Sbjct: 353 NVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADNAERLL 412

Query: 351 DIM-------NEASH----------------------------SPTVFTYNILINGLCKY 375
             M       N+ S                             SP       LI+GLCK+
Sbjct: 413 KEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKH 472

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G   +A+  + Q ++K    D  T N +L  LC+ G L+EA ++   + G  C    ++Y
Sbjct: 473 GKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSY 532

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           NTLI G   K  +++A +   +M++ G+ PD+ T+  LI G    ++VEEA+    +  +
Sbjct: 533 NTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKR 592

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G       Y ++I G CK+++ +   +  + M+S   +P+  V++ +++     G    
Sbjct: 593 NGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSM 652

Query: 556 AYKLWQKL 563
           A +L + +
Sbjct: 653 ALELREDM 660



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 118/462 (25%), Positives = 211/462 (45%), Gaps = 35/462 (7%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           ++ DA  ++  M ++   P+     NLI   I    + KA ++  +MV  G    + TYN
Sbjct: 334 RIGDAYFVLKEMTKKGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYN 393

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL-----RTMFD------------ 234
            ++ G CK GQ  +A  LL EM   G   +  ++ +++       MFD            
Sbjct: 394 TLIKGYCKNGQADNAERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLR 453

Query: 235 ------------------NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
                             +GK  +A+  W   L KG      T   L+  +C+   +  A
Sbjct: 454 NMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEA 513

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +  ++   GC  D V+YN+L++  C + K D+A + ++ ++ RG++P++ TY+ L+  
Sbjct: 514 FRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICG 573

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L +    +   +  D        P V+TY+++I+G CK    +     F++M+SKN QP+
Sbjct: 574 LFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPN 633

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            V YN ++ A C+ G L+ AL+L   +     SP   TY +LI G++    +E+A +L+ 
Sbjct: 634 TVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFE 693

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M   G+ P+   +  LI G+ +  Q+ +   LL+E+  +        Y ++I G  +  
Sbjct: 694 EMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDG 753

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
            V  A ++L  M      PD   +   +      G   EA+K
Sbjct: 754 NVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEAFK 795



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 163/330 (49%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  GK + A +L      +  + D      L+ GL    ++++A ++ + ++  G
Sbjct: 465 LISGLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRG 524

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V D ++YN ++ G C + ++  A   LDEM   G +PD  TY+ ++  +F+  K ++AI
Sbjct: 525 CVMDRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAI 584

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            FW D  R G  P + TY+++I+  CK        E  D+M  +   P+ V YN L+   
Sbjct: 585 QFWDDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAY 644

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G+   A+ +  ++  +G+ PNS TY +L+  +      +    + + M      P V
Sbjct: 645 CRSGRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNV 704

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           F Y  LI+G  K G + +      +M SKN  P+ +TY  ++G   ++G + EA +LL+ 
Sbjct: 705 FHYTALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNE 764

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           +      P  ITY   I G  K+G + +A 
Sbjct: 765 MREKGIVPDSITYKEFIYGYLKQGGVLEAF 794



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 100/360 (27%), Positives = 172/360 (47%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            CS      A + +  M  RN  P       LI GL +  +  KA ++    +  G V D
Sbjct: 434 LCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLISGLCKHGKHSKALELWFQFLNKGFVVD 493

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T N ++ GLC+ G++  A  +  E+   GC  D ++YNT++       K  +A  F  
Sbjct: 494 TRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFLD 553

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           + +++G  P   TY+ILI  +     +  AI+  DD    G  PD+ TY+ +++  CK  
Sbjct: 554 EMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKAE 613

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           + ++     + ++S+ ++PN++ YN L+ +    G      ++ + M     SP   TY 
Sbjct: 614 RTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATYT 673

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI G+     V+ A   F +M  +  +P++  Y  ++    K G + +   LL  ++  
Sbjct: 674 SLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHSK 733

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           +  P  ITY  +I G A+ G + +A  L  +M E GI PD IT++  I+G+ +   V EA
Sbjct: 734 NVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLEA 793



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 199/480 (41%), Gaps = 89/480 (18%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM-SVS 216
           L+ GL+    +  A++V+ I +++G VP           +   G   S +A+ D M S+S
Sbjct: 120 LLIGLLLDANLLSAARVVLIRLINGNVP-----------VLPCGLRDSRVAIADAMASLS 168

Query: 217 GCEPDVITYNT------ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
            C  + I          +  T F       A+  +     KG  P   T  IL+  + + 
Sbjct: 169 LCFDEEIRRKMSDLLIEVYCTQFKRDGCYLALDVFPVLANKGMFPSKTTCNILLTSLVRA 228

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
               +  E  D +  +G SPD+  + + +N  CK GK ++AV + + +   G+ PN +T+
Sbjct: 229 NEFQKCCEAFD-VVCKGVSPDVYLFTTAINAFCKGGKVEEAVKLFSKMEEAGVAPNVVTF 287

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           NT++  LG  G +D      + M E    PT+ TY+IL+ GL +   +  A     +M  
Sbjct: 288 NTVIDGLGMCGRYDEAFMFKEKMVERGMEPTLITYSILVKGLTRAKRIGDAYFVLKEMTK 347

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG---- 446
           K   P+++ YN ++ +  + G LN+A+++  L+     S    TYNTLI G  K G    
Sbjct: 348 KGFPPNVIVYNNLIDSFIEAGSLNKAIEIKDLMVSKGLSLTSSTYNTLIKGYCKNGQADN 407

Query: 447 ------------------------CM-------EKAMVLYGQMMENGISPDDITHRTLIW 475
                                   C+       + A+   G+M+   +SP      TLI 
Sbjct: 408 AERLLKEMLSIGFNVNQGSFTSVICLLCSHLMFDSALRFVGEMLLRNMSPGGGLLTTLIS 467

Query: 476 GFCR-----------------------------------ADQVEEAVDLLKEIGKRGNKM 500
           G C+                                   A +++EA  + KEI  RG  M
Sbjct: 468 GLCKHGKHSKALELWFQFLNKGFVVDTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVM 527

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              +Y  +I G C  KK+D A   L+ M+    KPD+  +S ++  + +    EEA + W
Sbjct: 528 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 587



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/303 (27%), Positives = 143/303 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +T+N +L   C  GKL +A ++   +  R  + D      LI G     ++++A   L
Sbjct: 493 DTRTSNALLHGLCEAGKLDEAFRIQKEILGRGCVMDRVSYNTLISGCCGKKKLDEAFMFL 552

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  PD  TY++++ GL    ++  AI   D+   +G  PDV TY+ ++      
Sbjct: 553 DEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFWDDCKRNGMLPDVYTYSVMIDGCCKA 612

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + ++   F+ + + K   P  + Y  LI   C+   ++ A+E+ +DM  +G SP+  TY
Sbjct: 613 ERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRSGRLSMALELREDMKHKGISPNSATY 672

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            SL+       + ++A L+   +   G+EPN   Y  L+   G  G    V+ +L  M+ 
Sbjct: 673 TSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHYTALIDGYGKLGQMVKVECLLREMHS 732

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P   TY ++I G  + G V  A    N+M  K   PD +TY   +    K+G + E
Sbjct: 733 KNVHPNKITYTVMIGGYARDGNVTEASRLLNEMREKGIVPDSITYKEFIYGYLKQGGVLE 792

Query: 416 ALQ 418
           A +
Sbjct: 793 AFK 795



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 72/272 (26%), Positives = 126/272 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N ++   C + KL +A   +D M +R   PD +    LI GL  ++++E+A +  
Sbjct: 528 DRVSYNTLISGCCGKKKLDEAFMFLDEMVKRGLKPDNYTYSILICGLFNMNKVEEAIQFW 587

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
                +G +PD  TY++M+ G CK  +        DEM     +P+ + YN ++R    +
Sbjct: 588 DDCKRNGMLPDVYTYSVMIDGCCKAERTEEGQEFFDEMMSKNVQPNTVVYNHLIRAYCRS 647

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   A+   +D   KG  P   TYT LI+ +     +  A  + ++M +EG  P++  Y
Sbjct: 648 GRLSMALELREDMKHKGISPNSATYTSLIKGMSIISRVEEAKLLFEEMRMEGLEPNVFHY 707

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++   K G+      ++  + S+ + PN ITY  ++      G      ++L+ M E
Sbjct: 708 TALIDGYGKLGQMVKVECLLREMHSKNVHPNKITYTVMIGGYARDGNVTEASRLLNEMRE 767

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
               P   TY   I G  K G V  A    ++
Sbjct: 768 KGIVPDSITYKEFIYGYLKQGGVLEAFKGSDE 799


>gi|46518447|gb|AAS99705.1| At1g62720 [Arabidopsis thaliana]
          Length = 426

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 110/352 (31%), Positives = 180/352 (51%), Gaps = 3/352 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T + ++  FC   ++ DA  L+  M      PD      +I G  +I  +  A +
Sbjct: 77  EPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVE 136

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M   G   D +TYN +V GLC  G+   A  L+ +M +    P+VIT+  ++    
Sbjct: 137 LFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFV 196

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GKF +A+  +++  R+   P + TY  LI  +C    +  A ++LD M  +GC PD+V
Sbjct: 197 KEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVV 256

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN+L+N  CK  + D+   +   +  RG+  ++ITYNT++      G  DA  +I   M
Sbjct: 257 TYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRM 316

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           +     P + TY+IL+ GLC    V++A+  F  M     + DI TYN V+  +CK G +
Sbjct: 317 DS---RPNIRTYSILLYGLCMNWRVEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNV 373

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            +A  L   L+     P +++Y T+I G  +K   +K+ +LY +M E+G+ P
Sbjct: 374 EDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQWDKSDLLYRKMQEDGLLP 425



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 113/380 (29%), Positives = 195/380 (51%), Gaps = 3/380 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D  +YN+++  LC+  +   A++++ +M   G EPDV+T ++++       +   AI   
Sbjct: 44  DLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLV 103

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
                 G  P ++ Y  +I+  CK   +  A+E+ D M  +G   D VTYNSLV   C  
Sbjct: 104 SKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCS 163

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G++ DA  ++ +++ R + PN IT+  ++      G +    K+ + M      P VFTY
Sbjct: 164 GRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTY 223

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N LINGLC +G VD A    + MV+K C PD+VTYNT++   CK   ++E  +L   +  
Sbjct: 224 NSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 283

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
                  ITYNT+I G  + G  + A  ++ +M      P+  T+  L++G C   +VE+
Sbjct: 284 RGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWRVEK 340

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+ L + + K   ++  + Y +VIHG+CK   V+ A  +   +     KPD   ++T++ 
Sbjct: 341 ALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMIS 400

Query: 546 KVADDGMTEEAYKLWQKLIE 565
                   +++  L++K+ E
Sbjct: 401 GFCRKRQWDKSDLLYRKMQE 420



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 105/386 (27%), Positives = 202/386 (52%), Gaps = 3/386 (0%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+ S  +P  + ++ ++  + K       I+L   M V G   D+ +YN ++  +    +
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F  A+      ++ G  P ++T + LI   C+   +  AI+++  M   G  PD+V YN+
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++ SCK G  +DAV + + +   G+  +++TYN+L+  L   G W    +++  M    
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P V T+  +I+   K G    A+  + +M  +   PD+ TYN+++  LC  G ++EA 
Sbjct: 181 IVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAK 240

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           Q+L L+    C P ++TYNTLI+G  K   +++   L+ +M + G+  D IT+ T+I G+
Sbjct: 241 QMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDTITYNTIIQGY 300

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +A + + A ++   +  R N      Y ++++GLC + +V+ A+ + E M  S  + D 
Sbjct: 301 FQAGRPDAAQEIFSRMDSRPNI---RTYSILLYGLCMNWRVEKALVLFENMQKSEIELDI 357

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKL 563
           T ++ ++  +   G  E+A+ L++ L
Sbjct: 358 TTYNIVIHGMCKIGNVEDAWDLFRSL 383



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 106/362 (29%), Positives = 183/362 (50%), Gaps = 3/362 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I  L R  R   A  V+  M+  G  PD +T + ++ G C+  ++  AI L+ +M   G
Sbjct: 51  VINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMG 110

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PDV+ YNTI+      G    A+  +    R G     +TY  L+  +C     + A 
Sbjct: 111 FRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAA 170

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            ++ DM +    P+++T+ ++++   K+GK+ +A+ +   +  R ++P+  TYN+L++ L
Sbjct: 171 RLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGL 230

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D   ++LD+M      P V TYN LING CK   VD     F +M  +    D 
Sbjct: 231 CMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQRGLVGDT 290

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +TYNT++    + G  + A ++   ++     P + TY+ L+ GL     +EKA+VL+  
Sbjct: 291 ITYNTIIQGYFQAGRPDAAQEIFSRMDS---RPNIRTYSILLYGLCMNWRVEKALVLFEN 347

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M ++ I  D  T+  +I G C+   VE+A DL + +  +G K    +Y  +I G C+ ++
Sbjct: 348 MQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTTMISGFCRKRQ 407

Query: 518 VD 519
            D
Sbjct: 408 WD 409



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 108/385 (28%), Positives = 196/385 (50%), Gaps = 3/385 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           + +D  + N ++   C   +   A  ++  M +    PD     +LI G  + +R+  A 
Sbjct: 41  IGHDLYSYNIVINCLCRCSRFVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAI 100

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M   G  PD + YN ++ G CK G +  A+ L D M   G   D +TYN+++  +
Sbjct: 101 DLVSKMEEMGFRPDVVIYNTIIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGL 160

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G++  A    +D + +   P +IT+T +I+   K+   + A+++ ++M      PD+
Sbjct: 161 CCSGRWSDAARLMRDMVMRDIVPNVITFTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDV 220

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TYNSL+N  C  G+ D+A  +++ ++++G  P+ +TYNTL++        D   K+   
Sbjct: 221 FTYNSLINGLCMHGRVDEAKQMLDLMVTKGCLPDVVTYNTLINGFCKSKRVDEGTKLFRE 280

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +        TYN +I G  + G  D A   F++M S+   P+I TY+ +L  LC    
Sbjct: 281 MAQRGLVGDTITYNTIIQGYFQAGRPDAAQEIFSRMDSR---PNIRTYSILLYGLCMNWR 337

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +AL L   +  S     + TYN +I G+ K G +E A  L+  +   G+ PD +++ T
Sbjct: 338 VEKALVLFENMQKSEIELDITTYNIVIHGMCKIGNVEDAWDLFRSLSCKGLKPDVVSYTT 397

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRG 497
           +I GFCR  Q +++  L +++ + G
Sbjct: 398 MISGFCRKRQWDKSDLLYRKMQEDG 422



 Score = 99.4 bits (246), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 62/276 (22%), Positives = 127/276 (46%), Gaps = 35/276 (12%)

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P+ + ++ +L  +     +D V  +   M        +++YNI+IN LC+      A++ 
Sbjct: 8   PSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSRFVIALSV 67

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M+    +PD+VT ++++   C+   + +A+ L+  +      P ++ YNT+IDG  K
Sbjct: 68  VGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNTIIDGSCK 127

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC-------------------------- 478
            G +  A+ L+ +M  +G+  D +T+ +L+ G C                          
Sbjct: 128 IGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRDIVPNVIT 187

Query: 479 ---------RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
                    +  +  EA+ L +E+ +R        Y  +I+GLC   +VD A Q+L+LM+
Sbjct: 188 FTAVIDVFVKEGKFSEAMKLYEEMTRRCVDPDVFTYNSLINGLCMHGRVDEAKQMLDLMV 247

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +    PD   ++T++         +E  KL++++ +
Sbjct: 248 TKGCLPDVVTYNTLINGFCKSKRVDEGTKLFREMAQ 283



 Score = 75.1 bits (183), Expect = 9e-11,   Method: Compositional matrix adjust.
 Identities = 47/190 (24%), Positives = 92/190 (48%)

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M+     P IV ++ VL  + K    +  + L H +        L +YN +I+ L +   
Sbjct: 1   MIQSRPLPSIVDFSKVLSKIAKSKNYDLVISLFHHMEVCGIGHDLYSYNIVINCLCRCSR 60

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
              A+ + G+MM+ G  PD +T  +LI GFC+ ++V +A+DL+ ++ + G +     Y  
Sbjct: 61  FVIALSVVGKMMKFGYEPDVVTVSSLINGFCQGNRVFDAIDLVSKMEEMGFRPDVVIYNT 120

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +I G CK   V+ A+++ + M     + D   ++++V  +   G   +A +L + ++   
Sbjct: 121 IIDGSCKIGLVNDAVELFDRMERDGVRADAVTYNSLVAGLCCSGRWSDAARLMRDMVMRD 180

Query: 568 VFEKGTTLLA 577
           +     T  A
Sbjct: 181 IVPNVITFTA 190


>gi|358347154|ref|XP_003637626.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355503561|gb|AES84764.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 989

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 128/478 (26%), Positives = 232/478 (48%), Gaps = 31/478 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N ++  FC +G +     L+  M +R    D   C  L++G  RI  ++ A 
Sbjct: 158 VDIDNVTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAE 217

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V+  +V  G   D I  N ++ G C+   +  A  L++    S  + D++TYNT+L+  
Sbjct: 218 WVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAF 277

Query: 233 FDNGK-------FKQAIGFWKDQLR------------KGCPPYLITYTILIEQVCKQCGI 273
              G        F + +GFWKD+ R            K   P L+TYT LI   CK  G+
Sbjct: 278 CKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGV 337

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             +  +   M + G  PD+VT +S++   C+ GK  +A ++   +   G++PN ++Y T+
Sbjct: 338 EESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATI 397

Query: 334 LHSLGSRGCWDAVDKILDIMNEASH------SPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           ++SL   G      ++++  N  S       S  + T   +++GL K G    A   F  
Sbjct: 398 INSLFKSG------RVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKTKEAEEVFET 451

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           ++  N  P+ VTY+ +L   CK G +  A  +L  +      P +IT++++I+G AKKG 
Sbjct: 452 ILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGM 511

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           + KA+ +  +M++  + P+ I +  LI G+ +A + + A D  KE+  R  +  N  + +
Sbjct: 512 LSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDI 571

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +++ L +  ++D A  ++  M S    PD   +++++     +G    A  + Q++ E
Sbjct: 572 LLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKE 629



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 150/588 (25%), Positives = 253/588 (43%), Gaps = 89/588 (15%)

Query: 55  SLKCRGLPGNVCIDRVNEVDQDEWSSESHV-LAVNKKLRGL-TITKKSHDPSLPSSDGPF 112
           S+ C  L    C  R+  V   EW   + V   V K + GL T+     +  L S     
Sbjct: 197 SITCNILVKGYC--RIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGYCEAVLMSQATEL 254

Query: 113 VEN--------DEKTNNKILQNFCSRGKLTDASKLI----------------DIMAR--- 145
           +EN        D  T N +L+ FC  G LT A  L                 D++ +   
Sbjct: 255 IENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDRLKNNDVVTQNEI 314

Query: 146 RNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRS 205
           +N  P       LI    +   +E++  + + M+M+G +PD +T + ++ G C+ G++  
Sbjct: 315 KNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTE 374

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG------------- 252
           A  L  EM   G +P+ ++Y TI+ ++F +G+  +A       + +G             
Sbjct: 375 AAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMD 434

Query: 253 ----------------------CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                                   P  +TY+ L++  CK   +  A  VL  M  E   P
Sbjct: 435 GLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPP 494

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           +++T++S++N   K+G    AV V+  ++ R + PN+I Y  L+      G  D  D   
Sbjct: 495 NVITFSSIINGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFC 554

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M       +   ++IL+N L + G +D A +    M SK   PDIV Y +++    KE
Sbjct: 555 KEMKSRRLEESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKE 614

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G    AL ++  +   +    ++ YN LI GL + G  +   V   +M+E G++PD IT+
Sbjct: 615 GNQLAALSIVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVC-SRMIELGLAPDCITY 673

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK---------------- 514
            T+I  +C   + E+A+D+L E+   G       Y ++I GLCK                
Sbjct: 674 NTIINTYCIKGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKA 733

Query: 515 ---SKKVDMAIQVLELMISS--RYKPDDTVFSTIVKK-VADDGMTEEA 556
              S+K D  +Q+ E +++S    K    V   +VK+ ++ D +T  A
Sbjct: 734 YSRSEKADKILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNA 781



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 127/516 (24%), Positives = 223/516 (43%), Gaps = 70/516 (13%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C    + ++  L   M     +PD   C +++ G  R  ++ +A+ + + M
Sbjct: 323 TYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREM 382

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ ++Y  ++  L K G++  A  L  +M V G   D++T  T++  +F  GK 
Sbjct: 383 YEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGISFDIVTCTTVMDGLFKVGKT 442

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A   ++  L+    P  +TY+ L++  CK   +  A  VL  M  E   P+++T++S+
Sbjct: 443 KEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSI 502

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   K+G    AV V+  ++ R + PN+I Y  L+      G  D  D     M     
Sbjct: 503 INGYAKKGMLSKAVDVLREMVQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRL 562

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
             +   ++IL+N L + G +D A +    M SK   PDIV Y +++    KEG    AL 
Sbjct: 563 EESNVIFDILLNNLKRVGRMDEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALS 622

Query: 419 LLH----------------LLNG----------SSCS--------PCLITYNTLIDGLAK 444
           ++                 L+ G            CS        P  ITYNT+I+    
Sbjct: 623 IVQEMKEKNIRFDVVAYNALIKGLLRLGKYDPRYVCSRMIELGLAPDCITYNTIINTYCI 682

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR----------------------ADQ 482
           KG  E A+ +  +M   GI P+ +T+  LI G C+                      AD+
Sbjct: 683 KGKTEDALDILNEMKSYGIMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADK 742

Query: 483 VEEAVD--------------LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           + +  +              +L E+ KRG       Y  +I G C    V+ A++    M
Sbjct: 743 ILQIHEKLVASGLELKRQKVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQM 802

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                 P+ T ++T++  +++ G+ EE  +  +KL+
Sbjct: 803 FVDGIAPNITTYNTLLGGLSNAGLMEEMMEETEKLV 838



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 116/465 (24%), Positives = 212/465 (45%), Gaps = 21/465 (4%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ + +  + + AS     M     +P   F   L+        + +   +   M+  G
Sbjct: 65  LIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLVSQVKLMYSDMLFCG 124

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD  + N++V  LCK G +  A+  L    V   + D +TYNT++      G   Q  
Sbjct: 125 VVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDV--VDIDNVTYNTVIWGFCQKGLVDQGF 182

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G   + +++G     IT  IL++  C+   +  A  V+ ++   G + D++  N+L++  
Sbjct: 183 GLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYNLVDGGVTKDVIGLNTLIDGY 242

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR--------------GCWDAVDK 348
           C+      A  +I N     ++ + +TYNTLL +                  G W   D+
Sbjct: 243 CEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGDLTRAESLFNEILGFWKDEDR 302

Query: 349 ILD----IMNEASH-SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           + +      NE  +  PT+ TY  LI   CK+  V+ + + + +M+     PD+VT +++
Sbjct: 303 LKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHSLYKKMIMNGIMPDVVTCSSI 362

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           L   C+ G L EA  L   +      P  ++Y T+I+ L K G + +A  L  QM+  GI
Sbjct: 363 LYGFCRHGKLTEAAVLFREMYEMGLDPNHVSYATIINSLFKSGRVMEAFNLQSQMVVRGI 422

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           S D +T  T++ G  +  + +EA ++ + I K         Y  ++ G CK  K+++A  
Sbjct: 423 SFDIVTCTTVMDGLFKVGKTKEAEEVFETILKLNLAPNCVTYSALLDGYCKLGKMELAEL 482

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           VL+ M      P+   FS+I+   A  GM  +A  + +++++  V
Sbjct: 483 VLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREMVQRNV 527



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 120/466 (25%), Positives = 209/466 (44%), Gaps = 43/466 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + +L  +C  GK+  A  ++  M + +  P+     ++I G  +   + KA  VL+ M
Sbjct: 463 TYSALLDGYCKLGKMELAELVLQKMEKEHVPPNVITFSSIINGYAKKGMLSKAVDVLREM 522

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V    +P+TI Y +++ G  K G+   A     EM     E   + ++ +L  +   G+ 
Sbjct: 523 VQRNVMPNTIVYAILIDGYFKAGEQDVADDFCKEMKSRRLEESNVIFDILLNNLKRVGRM 582

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A     D   KG  P ++ Y  LI+   K+     A+ ++ +M  +    D+V YN+L
Sbjct: 583 DEARSLIIDMYSKGIDPDIVNYASLIDGYFKEGNQLAALSIVQEMKEKNIRFDVVAYNAL 642

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEAS 357
           +    + GKYD    V + ++  G+ P+ ITYNT++++   +G   DA+D IL+ M    
Sbjct: 643 IKGLLRLGKYDPR-YVCSRMIELGLAPDCITYNTIINTYCIKGKTEDALD-ILNEMKSYG 700

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINS--------------------------------- 384
             P   TYNILI GLCK G V   I                                   
Sbjct: 701 IMPNAVTYNILIGGLCKTGFVPTPITHKFLVKAYSRSEKADKILQIHEKLVASGLELKRQ 760

Query: 385 ---FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
               ++MV +    D+VTYN ++   C    + +AL+    +     +P + TYNTL+ G
Sbjct: 761 KVVLDEMVKRGISADLVTYNALIRGYCTGSHVEKALKTYSQMFVDGIAPNITTYNTLLGG 820

Query: 442 LAKKGCMEKAMV----LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           L+  G ME+ M     L  +M E G+ P+  T+  L+ G+ R    ++ + L  E+  +G
Sbjct: 821 LSNAGLMEEMMEETEKLVSEMNERGLVPNAATYDILVSGYGRVGNRKKTIILHIEMITKG 880

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
                  Y ++I    KS K+  A ++L  +++    P+   +  +
Sbjct: 881 FVPTLKTYNVLISDYAKSGKMIEARELLNDLLTKGRIPNSFTYDIL 926



 Score = 88.2 bits (217), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 83/342 (24%), Positives = 144/342 (42%), Gaps = 38/342 (11%)

Query: 254 PP-----YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           PP     Y+  +  LI         + A      M   G  P +  +N+L+      G  
Sbjct: 51  PPTKTHLYVSFFCTLIRLYLTHDRFSTASATFSHMRALGLVPTLPFWNTLLYQFNASGLV 110

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV------DKILDIMNEASHSPTV 362
               L+ +++L  G+ P+  + N L+HSL   G  D        + ++DI N        
Sbjct: 111 SQVKLMYSDMLFCGVVPDVFSVNVLVHSLCKVGDLDLALGYLRNNDVVDIDN-------- 162

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN +I G C+ GLVD+     ++MV +    D +T N ++   C+ G++  A  +++ 
Sbjct: 163 VTYNTVIWGFCQKGLVDQGFGLLSEMVKRGLCFDSITCNILVKGYCRIGLVQYAEWVMYN 222

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L     +  +I  NTLIDG  +   M +A  L      + +  D +T+ TL+  FC+   
Sbjct: 223 LVDGGVTKDVIGLNTLIDGYCEAVLMSQATELIENSWRSDVKIDIVTYNTLLKAFCKTGD 282

Query: 483 VEEAVDLLKEI---GKRGNKMRNS----------------AYRLVIHGLCKSKKVDMAIQ 523
           +  A  L  EI    K  ++++N+                 Y  +I   CK   V+ +  
Sbjct: 283 LTRAESLFNEILGFWKDEDRLKNNDVVTQNEIKNLQPTLVTYTTLIAAYCKFVGVEESHS 342

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + + MI +   PD    S+I+      G   EA  L++++ E
Sbjct: 343 LYKKMIMNGIMPDVVTCSSILYGFCRHGKLTEAAVLFREMYE 384


>gi|302765176|ref|XP_002966009.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
 gi|300166823|gb|EFJ33429.1| hypothetical protein SELMODRAFT_84672 [Selaginella moellendorffii]
          Length = 413

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/395 (29%), Positives = 198/395 (50%), Gaps = 1/395 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIA 208
           PD      LI G  +    ++A  + + +   G   P+ ++++ +V  LCK  +   A+A
Sbjct: 9   PDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDALA 68

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           +  EM  +G + DV   NT++      G  +QA               + TY+ L++ + 
Sbjct: 69  VFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALG 128

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K    A+A+EV  +M   GC PD V YN L++   KQGK D+A+ ++ ++  +G+ P+  
Sbjct: 129 KAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCR 188

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TYN ++  L S G ++       +M    HSP V TYN L+NGL K    D A + F++M
Sbjct: 189 TYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEM 248

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
            +  C PD+ T+ T++  L K G + +AL+    L      P    YN LI G  + G +
Sbjct: 249 QANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQV 308

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           +K   L+  M+E    PD IT+  L+ GF R      A++LL+E+ + G+    + Y ++
Sbjct: 309 DKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVL 368

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           I  L  + +V+ A  + + MI+  + PD   +S +
Sbjct: 369 IRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 105/349 (30%), Positives = 171/349 (48%), Gaps = 4/349 (1%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            C   + TDA  +   M       D + C  LI    R+  + +A ++L  M     V D
Sbjct: 57  LCKMSRATDALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLD 116

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY+ ++  L K G+   A+ +   M  +GC PD + YN ++  +   GK  +A+   +
Sbjct: 117 VFTYSYLMDALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLE 176

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCG-IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           D  RKG  P   TY I+I+ V   CG   +A      M     SPD+VTYN+L+N   K 
Sbjct: 177 DMNRKGIMPDCRTYNIVID-VLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKL 235

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFT 364
            + D+A  + + + +    P+  T+ TL+ +L   G   DA+++   ++ +  H P  + 
Sbjct: 236 RRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLV-KMGHVPNSYI 294

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN LI+G C+ G VD+    F  M+  +C PD +TY  ++    + G  + A++LL  + 
Sbjct: 295 YNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMV 354

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
               +P L TYN LI  L+  G +E A  L+ +M+  G +PD  T+  L
Sbjct: 355 REGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 162/323 (50%), Gaps = 1/323 (0%)

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDA 311
           C P ++ Y  LI   CK     RA+++   +  EG C P+ V++++LV F CK  +  DA
Sbjct: 7   CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + V   +L  G++ +    NTL+H     G      ++L  M   +    VFTY+ L++ 
Sbjct: 67  LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           L K G   +A+  F+ M    C PD V YN ++  L K+G ++EAL+LL  +N     P 
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 186

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
             TYN +ID L+  G  EKA   +G M     SPD +T+ TL+ G  +  + +EA DL  
Sbjct: 187 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFD 246

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           E+         + +  +I  L K+ +++ A++    ++   + P+  +++ ++      G
Sbjct: 247 EMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSG 306

Query: 552 MTEEAYKLWQKLIEWKVFEKGTT 574
             ++ Y+L+Q +IE   F    T
Sbjct: 307 QVDKGYELFQDMIECSCFPDSIT 329



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 97/349 (27%), Positives = 170/349 (48%), Gaps = 1/349 (0%)

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARA 276
           C PDV+ YNT++      G   +A+  ++   ++G C P  +++  L+  +CK      A
Sbjct: 7   CAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATDA 66

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + V  +M   G   D+   N+L++ +C+ G    A  +++++ +     +  TY+ L+ +
Sbjct: 67  LAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDA 126

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           LG  G      ++   M +A   P    YN+LI+ L K G VD A+     M  K   PD
Sbjct: 127 LGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPD 186

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
             TYN V+  L   G   +A     ++     SP ++TYNTL++GL K    ++A  L+ 
Sbjct: 187 CRTYNIVIDVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFD 246

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M  N   PD  T  TLI    +A ++E+A++    + K G+   +  Y  +I G C+S 
Sbjct: 247 EMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSG 306

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +VD   ++ + MI     PD   ++ +V   +  G T  A +L Q+++ 
Sbjct: 307 QVDKGYELFQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVR 355



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 158/329 (48%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  ++ D    N ++   C  G L  A +L+  M     + D      L+  L +  R  
Sbjct: 75  GAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMDALGKAGRAA 134

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           KA +V   M  +G +PDT+ YN+++  L K+G++  A+ LL++M+  G  PD  TYN ++
Sbjct: 135 KALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVI 194

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +   G++++A  F+    R+   P ++TY  L+  + K      A ++ D+M    C 
Sbjct: 195 DVLSSCGRYEKAYSFFGMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCM 254

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD+ T+ +L++   K G+ +DA+     L+  G  PNS  YN L+      G  D   ++
Sbjct: 255 PDLTTFGTLIDTLAKAGRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYEL 314

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M E S  P   TY IL+ G  + G    A+    +MV +   P + TYN ++ +L  
Sbjct: 315 FQDMIECSCFPDSITYTILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSM 374

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTL 438
            G + +A  L   +     +P + TY+ L
Sbjct: 375 AGQVEDAYTLFKEMIAKGFNPDMQTYSAL 403



 Score =  105 bits (263), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 71/255 (27%), Positives = 116/255 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N ++     +GK+ +A +L++ M R+  +PD      +I  L    R EKA    
Sbjct: 151 DTVVYNVLISCLGKQGKVDEALELLEDMNRKGIMPDCRTYNIVIDVLSSCGRYEKAYSFF 210

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            +M      PD +TYN ++ GL K  +   A  L DEM  + C PD+ T+ T++ T+   
Sbjct: 211 GMMKRRKHSPDVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKA 270

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+ + A+      ++ G  P    Y  LI   C+   + +  E+  DM    C PD +TY
Sbjct: 271 GRMEDALEQSARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITY 330

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             LV    ++G    A+ ++  ++  G  P   TYN L+ SL   G  +    +   M  
Sbjct: 331 TILVLGFSRRGHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIA 390

Query: 356 ASHSPTVFTYNILIN 370
              +P + TY+ L N
Sbjct: 391 KGFNPDMQTYSALPN 405



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 54/187 (28%), Positives = 86/187 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L       +  +A  L D M     +PD      LI  L +  R+E A +  
Sbjct: 221 DVVTYNTLLNGLKKLRRTDEACDLFDEMQANKCMPDLTTFGTLIDTLAKAGRMEDALEQS 280

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +V  G VP++  YN ++ G C+ GQ+     L  +M    C PD ITY  ++      
Sbjct: 281 ARLVKMGHVPNSYIYNALISGFCRSGQVDKGYELFQDMIECSCFPDSITYTILVLGFSRR 340

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A+   ++ +R+G  P L TY +LI  +     +  A  +  +M  +G +PD+ TY
Sbjct: 341 GHTSMAMELLQEMVREGHTPALATYNVLIRSLSMAGQVEDAYTLFKEMIAKGFNPDMQTY 400

Query: 296 NSLVNFS 302
           ++L N S
Sbjct: 401 SALPNLS 407



 Score = 75.5 bits (184), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 45/173 (26%), Positives = 82/173 (47%), Gaps = 1/173 (0%)

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS-SCSPCLITYNTLIDGLAKKGCMEK 450
           +C PD+V YNT++   CK G  + AL +   L    SC P  ++++TL+  L K      
Sbjct: 6   DCAPDVVAYNTLIAGYCKAGDGDRALDMFRRLKQEGSCKPNAVSFDTLVIFLCKMSRATD 65

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+ ++ +M+  G+  D     TLI   CR   + +A  LL  +      +    Y  ++ 
Sbjct: 66  ALAVFQEMLGAGLQADVNVCNTLIHCTCRLGMLRQARRLLHHMTAHAFVLDVFTYSYLMD 125

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            L K+ +   A++V   M  +   PD  V++ ++  +   G  +EA +L + +
Sbjct: 126 ALGKAGRAAKALEVFSNMQKAGCMPDTVVYNVLISCLGKQGKVDEALELLEDM 178


>gi|15237384|ref|NP_197167.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171647|sp|Q9FMD3.1|PP389_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g16640, mitochondrial; Flags: Precursor
 gi|10176973|dbj|BAB10191.1| unnamed protein product [Arabidopsis thaliana]
 gi|110737318|dbj|BAF00605.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004938|gb|AED92321.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 504

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 116/444 (26%), Positives = 223/444 (50%)

Query: 122 KILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           ++L+N     KL D+  L   M +   +P       L+  + ++ + +    + + M M 
Sbjct: 51  EMLRNGIRFMKLDDSLDLFFHMVQCRPLPSIADFSRLLSAISKMKKYDVVIYLWEQMQML 110

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   +  T N+++   C+  Q+  A++ L +M   G EP ++T+ ++L       +   A
Sbjct: 111 GIPHNLCTCNILLNCFCRCSQLSLALSFLGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDA 170

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +  +   +  G  P ++ Y  +I+ +CK   +  A+++L+ M  +G  PD+VTYNSL++ 
Sbjct: 171 LYMFDQMVGMGYKPNVVIYNTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISG 230

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G++ DA  +++ +  R + P+  T+N L+ +    G     ++  + M   S  P 
Sbjct: 231 LCSSGRWSDATRMVSCMTKREIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPD 290

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + TY++LI GLC Y  +D A   F  MVSK C PD+VTY+ ++   CK   +   ++L  
Sbjct: 291 IVTYSLLIYGLCMYSRLDEAEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFC 350

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            ++        +TY  LI G  + G +  A  ++ +M+  G+ P+ IT+  L+ G C   
Sbjct: 351 EMSQRGVVRNTVTYTILIQGYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNG 410

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++E+A+ +L ++ K G       Y ++I G+CK+ +V  A  +   +      PD   ++
Sbjct: 411 KIEKALVILADMQKNGMDADIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYT 470

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
           T++  +   G+  EA  L++K+ E
Sbjct: 471 TMMLGLYKKGLRREADALFRKMKE 494



 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 109/372 (29%), Positives = 185/372 (49%), Gaps = 12/372 (3%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           + K  H+PS+             T   +L  FC   ++ DA  + D M      P+    
Sbjct: 142 MIKLGHEPSIV------------TFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIY 189

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
             +I GL +  +++ A  +L  M   G  PD +TYN ++ GLC  G+   A  ++  M+ 
Sbjct: 190 NTIIDGLCKSKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTK 249

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
               PDV T+N ++      G+  +A  F+++ +R+   P ++TY++LI  +C    +  
Sbjct: 250 REIYPDVFTFNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDE 309

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A E+   M  +GC PD+VTY+ L+N  CK  K +  + +   +  RG+  N++TY  L+ 
Sbjct: 310 AEEMFGFMVSKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVTYTILIQ 369

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                G  +  ++I   M      P + TYN+L++GLC  G +++A+     M       
Sbjct: 370 GYCRAGKLNVAEEIFRRMVFCGVHPNIITYNVLLHGLCDNGKIEKALVILADMQKNGMDA 429

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           DIVTYN ++  +CK G + +A  +   LN     P + TY T++ GL KKG   +A  L+
Sbjct: 430 DIVTYNIIIRGMCKAGEVADAWDIYCSLNCQGLMPDIWTYTTMMLGLYKKGLRREADALF 489

Query: 456 GQMMENGISPDD 467
            +M E+GI P++
Sbjct: 490 RKMKEDGILPNE 501



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/285 (28%), Positives = 131/285 (45%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P I  ++ L++   K  KYD  + +   +   G+  N  T N LL+              
Sbjct: 79  PSIADFSRLLSAISKMKKYDVVIYLWEQMQMLGIPHNLCTCNILLNCFCRCSQLSLALSF 138

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L  M +  H P++ T+  L+NG C+   V  A+  F+QMV    +P++V YNT++  LCK
Sbjct: 139 LGKMIKLGHEPSIVTFGSLLNGFCRGDRVYDALYMFDQMVGMGYKPNVVIYNTIIDGLCK 198

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              ++ AL LL+ +      P ++TYN+LI GL   G    A  +   M +  I PD  T
Sbjct: 199 SKQVDNALDLLNRMEKDGIGPDVVTYNSLISGLCSSGRWSDATRMVSCMTKREIYPDVFT 258

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              LI    +  +V EA +  +E+ +R        Y L+I+GLC   ++D A ++   M+
Sbjct: 259 FNALIDACVKEGRVSEAEEFYEEMIRRSLDPDIVTYSLLIYGLCMYSRLDEAEEMFGFMV 318

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           S    PD   +S ++         E   KL+ ++ +  V     T
Sbjct: 319 SKGCFPDVVTYSILINGYCKSKKVEHGMKLFCEMSQRGVVRNTVT 363


>gi|357438845|ref|XP_003589699.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355478747|gb|AES59950.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 806

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 117/422 (27%), Positives = 204/422 (48%), Gaps = 30/422 (7%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG- 236
           M   G  P+  TYN+++  LC+ G++  A  LL EMS  GC+PD ++Y T++ +M   G 
Sbjct: 170 MKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPDDVSYTTVISSMCKLGD 229

Query: 237 -----------------------------KFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
                                        +FK+A     + + +G  P +I+Y+ +I  +
Sbjct: 230 VDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCL 289

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                +  ++ V   M + GC P++ T+ SL+     +G+  DAV + N ++  G+ PN 
Sbjct: 290 SDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNV 349

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           + YNTL+H L S G  D    + + M + S  P V TY+ +I G  K G +  A  ++N+
Sbjct: 350 VAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNK 409

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M++  C+P++V Y  ++  LC+  M ++A  L+  +    C P +IT+N  I GL + G 
Sbjct: 410 MINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGR 469

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +E AM +  QM +    P+  T+  L+ G  RA+   EA  L++E+ +R  +     Y  
Sbjct: 470 VEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFREACGLIRELEERKVEFDCVTYNT 529

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +++G   +      +Q+L  M+ +  K D    +T V      G  + A K+   +   K
Sbjct: 530 IMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEK 589

Query: 568 VF 569
            F
Sbjct: 590 EF 591



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 114/431 (26%), Positives = 211/431 (48%), Gaps = 6/431 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ +   ++ + C  G +  A +L   M     +P ++    LI G+ +  R ++A  ++
Sbjct: 213 DDVSYTTVISSMCKLGDVDKARELA--MKFEPVVPVYN---ALIHGVCKECRFKEAFDLM 267

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  P+ I+Y+ ++  L   G +  ++A+   M V GC P+V T+ ++++  F  
Sbjct: 268 NEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVR 327

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   A+G W   +R+G  P ++ Y  LI  +C    +  AI V + M  +   P++ TY
Sbjct: 328 GRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTY 387

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++++    K G    A    N +++ G  PN + Y  ++  L     +D    ++D M  
Sbjct: 388 STIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSMFDQAFDLIDNMIS 447

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               PTV T+N  I GLC+ G V+ A+N  +QM    C P+I TYN +L  L +     E
Sbjct: 448 DGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNELLDGLFRANAFRE 507

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L+  L         +TYNT++ G +  G  ++ + L G+M+ NGI  D IT  T + 
Sbjct: 508 ACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNGIKLDTITVNTTVN 567

Query: 476 GFCRADQVEEAVDLLKEI-GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            +C+  +V+ A+ +L  I  ++  +     + +++ G+C     + A+  L  M+     
Sbjct: 568 AYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEAVVYLHEMLKRGIF 627

Query: 535 PDDTVFSTIVK 545
           P+   ++ +V+
Sbjct: 628 PNIATWNVLVR 638



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 102/411 (24%), Positives = 200/411 (48%), Gaps = 7/411 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI-RSAIALLDEMSVS 216
           +I  L R + ++  S +LQ M +   VP +      V    +R  +    + +   +   
Sbjct: 80  MIDKLGRNNEMDGVSYLLQQMKLEN-VPCSQELFQFVIKCYRRSNLGEQGLKMFYRIREF 138

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           GCEP V  YN +L  +     FK     + +   +G  P + TY +L++ +C+   +  A
Sbjct: 139 GCEPSVKIYNLVLDALLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGA 198

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
            ++L +M+ +GC PD V+Y ++++  CK G  D A       L+   EP    YN L+H 
Sbjct: 199 CKLLVEMSNKGCDPDDVSYTTVISSMCKLGDVDKA-----RELAMKFEPVVPVYNALIHG 253

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           +     +     +++ M +    P V +Y+ +I+ L   G V+ ++  F +M  + C+P+
Sbjct: 254 VCKECRFKEAFDLMNEMVDRGVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPN 313

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           + T+ +++      G + +A+ L +L+     SP ++ YNTLI GL   G M++A+ ++ 
Sbjct: 314 VQTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWN 373

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           QM ++ I P+  T+ T+I+GF ++  +  A +   ++   G +     Y  ++  LC+  
Sbjct: 374 QMEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMS 433

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
             D A  +++ MIS    P    F+  +K +   G  E A  +  ++ +++
Sbjct: 434 MFDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYE 484



 Score =  143 bits (360), Expect = 3e-31,   Method: Compositional matrix adjust.
 Identities = 92/329 (27%), Positives = 153/329 (46%), Gaps = 1/329 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           +T   +++ F  RG++ DA  L ++M R    P+      LI GL     +++A  V   
Sbjct: 315 QTFTSLIKGFFVRGRVGDAVGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQ 374

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M      P+  TY+ ++ G  K G + SA    ++M   GC P+V+ Y  ++  +     
Sbjct: 375 MEKDSIRPNVTTYSTIIYGFAKSGDLVSACETWNKMINCGCRPNVVVYTCMVDVLCQMSM 434

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F QA     + +  GCPP +IT+   I+ +C+   +  A+ VLD M    C P+I TYN 
Sbjct: 435 FDQAFDLIDNMISDGCPPTVITFNNFIKGLCRAGRVEWAMNVLDQMEKYECLPNIRTYNE 494

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++   +   + +A  +I  L  R +E + +TYNT+++     G    V ++L  M    
Sbjct: 495 LLDGLFRANAFREACGLIRELEERKVEFDCVTYNTIMYGFSFNGMHQQVLQLLGKMLVNG 554

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQM-VSKNCQPDIVTYNTVLGALCKEGMLNEA 416
                 T N  +N  CK G V  AI   + +   K  + DI+T+  +L  +C      EA
Sbjct: 555 IKLDTITVNTTVNAYCKLGKVKTAIKVLDNISAEKEFRADIITHTIILWGICNWLGTEEA 614

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
           +  LH +      P + T+N L+ G   K
Sbjct: 615 VVYLHEMLKRGIFPNIATWNVLVRGFFSK 643



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 168/378 (44%), Gaps = 49/378 (12%)

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
           E D+++     +++ ++G FK                  +TY  +I+++ +   +     
Sbjct: 51  EHDIVSSLEYFKSLSNSGTFKHT---------------HLTYETMIDKLGRNNEMDGVSY 95

Query: 279 VLDDMAIEG--CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           +L  M +E   CS ++  +  ++    +    +  + +   +   G EP+   YN +L +
Sbjct: 96  LLQQMKLENVPCSQELFQF--VIKCYRRSNLGEQGLKMFYRIREFGCEPSVKIYNLVLDA 153

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L S+  +  ++ + + M      P VFTYN+L+  LC+ G VD A     +M +K C PD
Sbjct: 154 LLSQNLFKMINALYNNMKSEGLEPNVFTYNVLLKALCQNGKVDGACKLLVEMSNKGCDPD 213

Query: 397 IVTYNTVLGALCKEG------------------------------MLNEALQLLHLLNGS 426
            V+Y TV+ ++CK G                                 EA  L++ +   
Sbjct: 214 DVSYTTVISSMCKLGDVDKARELAMKFEPVVPVYNALIHGVCKECRFKEAFDLMNEMVDR 273

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P +I+Y+T+I  L+  G +E ++ ++G+M   G  P+  T  +LI GF    +V +A
Sbjct: 274 GVDPNVISYSTVISCLSDMGNVELSLAVFGRMFVRGCRPNVQTFTSLIKGFFVRGRVGDA 333

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           V L   + + G      AY  +IHGLC    +D AI V   M     +P+ T +STI+  
Sbjct: 334 VGLWNLMIREGVSPNVVAYNTLIHGLCSDGNMDEAISVWNQMEKDSIRPNVTTYSTIIYG 393

Query: 547 VADDGMTEEAYKLWQKLI 564
            A  G    A + W K+I
Sbjct: 394 FAKSGDLVSACETWNKMI 411


>gi|297848948|ref|XP_002892355.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297338197|gb|EFH68614.1| hypothetical protein ARALYDRAFT_311741 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 988

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/489 (25%), Positives = 228/489 (46%), Gaps = 52/489 (10%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
            CS GK   A  +I  M  +  IPD      ++  L    ++E A  + + M   G V D
Sbjct: 458 LCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVAD 517

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TY +MV   CK G I  A    +EM   GC P+V+TY  ++       K   A   ++
Sbjct: 518 VYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFE 577

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI-------------- 292
             L +GC P ++TY+ LI+  CK   + +A ++ + M      PD+              
Sbjct: 578 TMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNSER 637

Query: 293 ---VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
              V Y +L++  CK  + ++A  +++ +   G EPN I Y+ L+  L   G  D   ++
Sbjct: 638 PNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQEV 697

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M+E     T++TY+ LI+   K    D A    ++M+  +C P++V Y  ++  LCK
Sbjct: 698 KAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGLCK 757

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G  +EA +L+ ++    C P ++TY  +IDG  + G +E  + L  +M   G++P+ +T
Sbjct: 758 VGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKGVAPNYVT 817

Query: 470 HRTLIWGFCRADQVE---------------------------------EAVDLLKEIGKR 496
           +R LI   C+   ++                                 E++ LL EIG+ 
Sbjct: 818 YRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYRKVIEGFNKEFIESLGLLDEIGQD 877

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLE--LMISSRYKPDDTVFSTIVKKVADDGMTE 554
                 S YRL++  L K+++++MA+++LE     S+      + ++++++ +      +
Sbjct: 878 DTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATFSATLVDYSSTYNSLIESLCLANKVD 937

Query: 555 EAYKLWQKL 563
           +A++L+ ++
Sbjct: 938 KAFRLFSEM 946



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 128/498 (25%), Positives = 218/498 (43%), Gaps = 61/498 (12%)

Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP 185
           + C  GK  +A   + +M   N +PD  F   LI GL      E+A   L  M  +  +P
Sbjct: 279 SLCKVGKWREA---LTLMETENFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLP 335

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           + +TY+ ++ G   + Q+     +L+ M + GC P    +N+++     +G    A    
Sbjct: 336 NVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLL 395

Query: 246 KDQLRKGCPPYLITYTILIEQVCK-----QCGIARAIE-VLDDMAIEGCSPDIVTYNSLV 299
           K  ++ G  P  + Y ILI  +C       C +    E    +M   G   + +  +S  
Sbjct: 396 KKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFT 455

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              C  GKY+ A  VI  ++ +G  P++ TY+ +L  L +    +    + + M      
Sbjct: 456 RCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLV 515

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             V+TY I+++  CK GL+++A   FN+M    C P++VTY  ++ A  K   ++ A +L
Sbjct: 516 ADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANEL 575

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM-----------------ENG 462
              +    C P ++TY+ LIDG  K G MEKA  ++ +M                  +N 
Sbjct: 576 FETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQYDDDNS 635

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC--------- 513
             P+ + +  L+ GFC+  +VEEA  LL  +   G +     Y  +I GLC         
Sbjct: 636 ERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGKLDEAQ 695

Query: 514 --------------------------KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
                                     K K+ D+A +VL  M+ +   P+  +++ ++  +
Sbjct: 696 EVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTEMIDGL 755

Query: 548 ADDGMTEEAYKLWQKLIE 565
              G T+EAYKL Q + E
Sbjct: 756 CKVGKTDEAYKLMQMMEE 773



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 115/429 (26%), Positives = 201/429 (46%), Gaps = 21/429 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +    K++ A++L + M     +P+      LI G  +  ++EKA ++ + M
Sbjct: 555 TYTALIHAYLKAKKVSYANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERM 614

Query: 179 VMSGGVPDT-----------------ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPD 221
             S  VPD                  + Y  ++ G CK  ++  A  LLD MS+ GCEP+
Sbjct: 615 CGSKDVPDVDMYFKQYDDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPN 674

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
            I Y+ ++  +   GK  +A     +    G P  L TY+ LI++  K      A +VL 
Sbjct: 675 QIVYDALIDGLCKVGKLDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLS 734

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
            M    C+P++V Y  +++  CK GK D+A  ++  +  +G +PN +TY  ++   G  G
Sbjct: 735 KMLENSCAPNVVIYTEMIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIG 794

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             +   ++L+ M     +P   TY +LI+  CK G +D A N   +M   +       Y 
Sbjct: 795 KIETCLELLERMGSKGVAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAGYR 854

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            V+    KE +  E+L LL  +     +P L  Y  L+D L K   +E A+ L  ++   
Sbjct: 855 KVIEGFNKEFI--ESLGLLDEIGQDDTAPFLSLYRLLVDNLIKAQRLEMALRLLEEVATF 912

Query: 462 GISPDDI--THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
             +  D   T+ +LI   C A++V++A  L  E+ K+G       +  +I GL ++ K+ 
Sbjct: 913 SATLVDYSSTYNSLIESLCLANKVDKAFRLFSEMSKKGVIPEMQTFCSLIKGLFRNSKIS 972

Query: 520 MAIQVLELM 528
            A+ +L+ +
Sbjct: 973 EALLLLDFI 981



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 110/462 (23%), Positives = 205/462 (44%), Gaps = 60/462 (12%)

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGG---------------------------------- 196
           A K+L+ MV  G  P  + YN+++G                                   
Sbjct: 391 AYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKIN 450

Query: 197 -------LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
                  LC  G+   A +++ EM   G  PD  TY+ +L  + +  K + A   +++  
Sbjct: 451 VSSFTRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMK 510

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R G    + TYTI+++  CK   I +A +  ++M   GC+P++VTY +L++   K  K  
Sbjct: 511 RGGLVADVYTYTIMVDSFCKAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVS 570

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM---------------- 353
            A  +   +LS G  PN +TY+ L+      G  +   +I + M                
Sbjct: 571 YANELFETMLSEGCLPNIVTYSALIDGHCKAGQMEKACQIFERMCGSKDVPDVDMYFKQY 630

Query: 354 -NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
            ++ S  P V  Y  L++G CK   V+ A    + M  + C+P+ + Y+ ++  LCK G 
Sbjct: 631 DDDNSERPNVVIYGALLDGFCKLHRVEEARKLLDAMSMEGCEPNQIVYDALIDGLCKVGK 690

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EA ++   ++       L TY++LID   K    + A  +  +M+EN  +P+ + +  
Sbjct: 691 LDEAQEVKAEMSEHGFPATLYTYSSLIDRYFKVKRQDLASKVLSKMLENSCAPNVVIYTE 750

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G C+  + +EA  L++ + ++G +     Y  +I G  +  K++  +++LE M S  
Sbjct: 751 MIDGLCKVGKTDEAYKLMQMMEEKGCQPNVVTYTAMIDGFGRIGKIETCLELLERMGSKG 810

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKL--IEWKVFEKG 572
             P+   +  ++     +G  + A+ L +++    W     G
Sbjct: 811 VAPNYVTYRVLIDHCCKNGALDVAHNLLEEMKQTHWPTHAAG 852



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 92/385 (23%), Positives = 179/385 (46%), Gaps = 9/385 (2%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P   TYN ++    K   + SA  +  EMS++    D  T      ++   GK+++A+  
Sbjct: 233 PSRSTYNCLIQAFLKADCLDSASLVHREMSLANLRMDGFTLRCYAYSLCKVGKWREALTL 292

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            + +      P  + YT LI  +C+      A++ L+ M    C P++VTY++L+     
Sbjct: 293 METE---NFVPDTVFYTKLISGLCEASLFEEAMDFLNRMRATSCLPNVVTYSTLLCGCLN 349

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           + +      V+N ++  G  P+   +N+L+H+  + G      K+L  M +  H+P    
Sbjct: 350 KKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHAYCTSGDHSYAYKLLKKMVKCGHTPGYVV 409

Query: 365 YNILINGLC------KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           YNILI  +C         L++ A  ++++M++     + +  ++    LC  G   +A  
Sbjct: 410 YNILIGSICGDKDSLSCHLLELAEKAYSEMLATGVVLNKINVSSFTRCLCSAGKYEKAFS 469

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           ++  + G    P   TY+ ++  L     ME A +L+ +M   G+  D  T+  ++  FC
Sbjct: 470 VIREMIGQGFIPDTSTYSKVLGYLCNASKMELAFLLFEEMKRGGLVADVYTYTIMVDSFC 529

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +A  +E+A     E+ + G       Y  +IH   K+KKV  A ++ E M+S    P+  
Sbjct: 530 KAGLIEQARKWFNEMREVGCTPNVVTYTALIHAYLKAKKVSYANELFETMLSEGCLPNIV 589

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            +S ++      G  E+A ++++++
Sbjct: 590 TYSALIDGHCKAGQMEKACQIFERM 614



 Score = 99.4 bits (246), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 74/311 (23%), Positives = 137/311 (44%), Gaps = 15/311 (4%)

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           +L+ + C+    + A+E L  +      P   TYN L+    K    D A LV   +   
Sbjct: 205 VLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSLA 264

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            +  +  T     +SL   G W    + L +M   +  P    Y  LI+GLC+  L + A
Sbjct: 265 NLRMDGFTLRCYAYSLCKVGKW---REALTLMETENFVPDTVFYTKLISGLCEASLFEEA 321

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           ++  N+M + +C P++VTY+T+L     +  L    ++L+++    C P    +N+L+  
Sbjct: 322 MDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVHA 381

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC---------RADQVEEAVDLLKE 492
               G    A  L  +M++ G +P  + +  LI   C           +  E+A   +  
Sbjct: 382 YCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKDSLSCHLLELAEKAYSEMLA 441

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
            G   NK+  S++      LC + K + A  V+  MI   + PD + +S ++  + +   
Sbjct: 442 TGVVLNKINVSSF---TRCLCSAGKYEKAFSVIREMIGQGFIPDTSTYSKVLGYLCNASK 498

Query: 553 TEEAYKLWQKL 563
            E A+ L++++
Sbjct: 499 MELAFLLFEEM 509



 Score = 91.3 bits (225), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 68/276 (24%), Positives = 123/276 (44%), Gaps = 11/276 (3%)

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N LV   C+ G +  A+  +  L      P+  TYN L+ +     C D+   +   M+ 
Sbjct: 204 NVLVRKYCRSGSFSIALEELGRLKDFRFRPSRSTYNCLIQAFLKADCLDSASLVHREMSL 263

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           A+     FT       LCK G    A+     M ++N  PD V Y  ++  LC+  +  E
Sbjct: 264 ANLRMDGFTLRCYAYSLCKVGKWREAL---TLMETENFVPDTVFYTKLISGLCEASLFEE 320

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+  L+ +  +SC P ++TY+TL+ G   K  + +   +   MM  G  P      +L+ 
Sbjct: 321 AMDFLNRMRATSCLPNVVTYSTLLCGCLNKKQLGRCKRVLNMMMMEGCYPSPKIFNSLVH 380

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL-------M 528
            +C +     A  LLK++ K G+      Y ++I  +C  K   ++  +LEL       M
Sbjct: 381 AYCTSGDHSYAYKLLKKMVKCGHTPGYVVYNILIGSICGDKD-SLSCHLLELAEKAYSEM 439

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +++    +    S+  + +   G  E+A+ + +++I
Sbjct: 440 LATGVVLNKINVSSFTRCLCSAGKYEKAFSVIREMI 475


>gi|449446121|ref|XP_004140820.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 122/445 (27%), Positives = 213/445 (47%), Gaps = 13/445 (2%)

Query: 125 QNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI-RIDRIEKASKVLQIMVMSGG 183
           Q++C+      A ++            F  C ++IR L+ R  +   AS    I+  +G 
Sbjct: 102 QSYCAMANFLSAHQM------------FQECQSIIRFLVSRKGKDSAASVFAAILDTAGT 149

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
                 ++ ++      G +  AI     +  S  +        +L  M ++        
Sbjct: 150 RCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWT 209

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
           F+ + L  G PP +  Y ILI + CK+  I  A  + +++   G  P  V++N+L+N  C
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K    D+   +   +    + P+  TY+ L+H L   G  D  +++ D M +    P   
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           T+  LI+G C+   +D A+N+++QM++   +PD+V YNT+L  LCK G +N+A +L+  +
Sbjct: 330 TFTALIDGQCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P  ITY TLIDG  K+G +E AM +   M E G+  D++    LI GFCR  +V
Sbjct: 390 RMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            +A   L+E+ + G K  ++ Y +VI G CK   V M  ++L+ M  + +KP    ++ +
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVL 509

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKV 568
           +  +   G  + A  L + ++   V
Sbjct: 510 MNGLCKQGQMKNANMLLEAMLNLGV 534



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 169/345 (48%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P   +   LI    +   I  A  +   +   G  P T+++N ++ GLCK   +     L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
              M  +   PDV TY+ ++  +   G+   A   + +  ++G  P  IT+T LI+  C+
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCR 340

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              I  A+     M   G  PD+V YN+L+N  CK G  + A  +++ +   GM+P+ IT
Sbjct: 341 SRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKIT 400

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y TL+      G  ++  +I   MNE         +  LI+G C+ G V  A  +  +MV
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
               +PD  TY  V+   CK+G +    +LL  +  +   P +ITYN L++GL K+G M+
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
            A +L   M+  G++PDDIT+  L+ G C+  + E+ + L  E G
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 565



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 166/343 (48%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P V  YN ++      G  + A   + +  ++G  P  +++  LI  +CK   +   
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +   M      PD+ TY+ L++  CK+G+ D A  + + +  RG+ PN IT+  L+  
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
                  D+       M      P +  YN L+NGLCK G V++A    ++M     +PD
Sbjct: 338 QCRSRRIDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPD 397

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            +TY T++   CKEG L  A+++   +N        + +  LI G  + G +  A     
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M+E G+ PDD T+  +I G+C+   V+    LLKE+   G+K     Y ++++GLCK  
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQG 517

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           ++  A  +LE M++    PDD  ++ +++    +G  E+  KL
Sbjct: 518 QMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  160 bits (406), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 172/354 (48%), Gaps = 3/354 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  G + DA  + + + +R   P       LI GL +   +++  ++ + M  
Sbjct: 227 NILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEE 286

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +   PD  TY++++ GLCK G++  A  L DEM   G  P+ IT+  ++     + +   
Sbjct: 287 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDS 346

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +   L  G  P L+ Y  L+  +CK   + +A +++D+M + G  PD +TY +L++
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLID 406

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK+G  + A+ +   +   G+  +++ +  L+      G     ++ L  M EA   P
Sbjct: 407 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TY ++I+G CK G V        +M     +P ++TYN ++  LCK+G +  A  LL
Sbjct: 467 DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLL 526

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
             +     +P  ITYN L++G  K G  E  + L     E G+  D   + +L+
Sbjct: 527 EAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLIVDYAYYTSLV 577



 Score =  130 bits (328), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 81/261 (31%), Positives = 123/261 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++   C  G+L  A +L D M +R   P+      LI G  R  RI+ A    
Sbjct: 292 DVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQCRSRRIDSAMNTY 351

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PD + YN ++ GLCK G +  A  L+DEM + G +PD ITY T++      
Sbjct: 352 HQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKE 411

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  + A+   K    +G     + +T LI   C+   +  A   L +M   G  PD  TY
Sbjct: 412 GDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             +++  CK+G       ++  +   G +P  ITYN L++ L  +G     + +L+ M  
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531

Query: 356 ASHSPTVFTYNILINGLCKYG 376
              +P   TYNIL+ G CK G
Sbjct: 532 LGVTPDDITYNILLEGHCKNG 552



 Score =  100 bits (250), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 97/204 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D    N +L   C  G +  A KL+D M      PD      LI G  +   +E A 
Sbjct: 359 VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMRMVGMKPDKITYTTLIDGYCKEGDLESAM 418

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + M   G V D + +  ++ G C+ G++R A   L EM  +G +PD  TY  ++   
Sbjct: 419 EIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGY 478

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G  K      K+    G  P +ITY +L+  +CKQ  +  A  +L+ M   G +PD 
Sbjct: 479 CKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDD 538

Query: 293 VTYNSLVNFSCKQGKYDDAVLVIN 316
           +TYN L+   CK GK +D + + N
Sbjct: 539 ITYNILLEGHCKNGKAEDLLKLRN 562



 Score = 68.6 bits (166), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 83/178 (46%)

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           ++ ++ A    G +++A+Q   L+  S+          L+D +            Y +++
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           E G  P    +  LI  FC+   + +A  +  EI KRG +    ++  +I+GLCKS+ +D
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
              ++ + M  +R  PD   +S ++  +  +G  + A +L+ ++ +  +   G T  A
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333


>gi|242073234|ref|XP_002446553.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
 gi|241937736|gb|EES10881.1| hypothetical protein SORBIDRAFT_06g018030 [Sorghum bicolor]
          Length = 381

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 104/376 (27%), Positives = 207/376 (55%), Gaps = 6/376 (1%)

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +++ +M   G  P+ +TYN+++  +C+ G +  A  LL+ +   GC+P+ + YNT+L+ +
Sbjct: 2   ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               ++  A     + +R+ CPP   T  +++  + ++  + +    L+ M+  GC+ ++
Sbjct: 62  CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN++++  C+QG  D A+ +++N+ S G +P+ +TYNTLL  L S   W+  ++++  
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M++    P   T+N +I+ LC+ GL+ +A   F QM  K C P+  TY+T++G L K G 
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGK 241

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +AL+LL+ +  S        Y  L + L K+  +E+ + +  ++ ++GISP  +   T
Sbjct: 242 MEQALELLNEM-ASKGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNT 300

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++   CR  + + A+D+L ++   G       Y ++I GL     +  A +++     SR
Sbjct: 301 VLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELV-----SR 355

Query: 533 YKPDDTVFSTIVKKVA 548
               D + ++++K  A
Sbjct: 356 LCSRDVLSNSLIKNEA 371



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 95/316 (30%), Positives = 183/316 (57%), Gaps = 1/316 (0%)

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           +GC P ++TY ++I+ +C++  + +A E+L+ +   GC P+ V YN+++   C   ++ D
Sbjct: 10  EGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVD 69

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A  +++ ++     PN  T N ++++L  +G    V + L+ M++   +  V TYN +I+
Sbjct: 70  AEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVIS 129

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G+C+ G VD A+   + M S  C+PDIVTYNT+L  LC      +A +L+  ++ + C P
Sbjct: 130 GMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLP 189

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             +T+NT+I  L +KG + +A  ++ QM E G +P+  T+ T+I G  +A ++E+A++LL
Sbjct: 190 DNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGKMEQALELL 249

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+  +G    +  Y+L+   L K  K++  +QV+  +  S   P   +F+T++  +  +
Sbjct: 250 NEMASKGYN-TDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRN 308

Query: 551 GMTEEAYKLWQKLIEW 566
           G T+ A  +   ++ +
Sbjct: 309 GKTDYAIDVLADMVSY 324



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 104/359 (28%), Positives = 186/359 (51%), Gaps = 1/359 (0%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           +LID+M      P+      +I  + R   +++A ++L  +   G  P+T+ YN ++ GL
Sbjct: 2   ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C   +   A  LLDEM    C P+  T N I+ T+   G  ++   + +   + GC   +
Sbjct: 62  CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +TY  +I  +C+Q  +  A+E+L +M   GC PDIVTYN+L+   C   +++DA  ++  
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +      P+++T+NT++  L  +G      ++   M E   +P   TY+ +I GL K G 
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGK 241

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +++A+   N+M SK    D + Y  +  +L KE  + E +Q++H L  S  SP  + +NT
Sbjct: 242 MEQALELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNT 300

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           ++  L + G  + A+ +   M+  G  PD++T+  LI G      ++EA +L+  +  R
Sbjct: 301 VLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRLCSR 359



 Score =  164 bits (416), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 91/303 (30%), Positives = 162/303 (53%), Gaps = 1/303 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L+  CS  +  DA +L+D M R N  P+      ++  L R   ++K ++ L+ M  
Sbjct: 55  NTVLKGLCSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSK 114

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   + +TYN ++ G+C++G + SA+ LL  M   GC+PD++TYNT+L+ +    +++ 
Sbjct: 115 HGCTANVVTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWED 174

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A        +  C P  +T+  +I  +C++  I +A EV   M  +GC+P+  TY++++ 
Sbjct: 175 AEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIG 234

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K GK + A+ ++N + S+G   + + Y  L  SL      + V +++  + ++  SP
Sbjct: 235 GLAKAGKMEQALELLNEMASKGYNTDKM-YQLLTESLNKEDKIEEVVQVVHKLQDSGISP 293

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
               +N ++  LC+ G  D AI+    MVS  C PD +TY  ++  L  EG L EA +L+
Sbjct: 294 QTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELV 353

Query: 421 HLL 423
             L
Sbjct: 354 SRL 356



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 95/342 (27%), Positives = 173/342 (50%), Gaps = 5/342 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+   C  G +  A +L++ +  R   P+      +++GL  I+R   A ++L  M
Sbjct: 18  TYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGLCSIERWVDAEELLDEM 77

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V     P+  T N++V  L ++G ++     L++MS  GC  +V+TYN ++  M + G  
Sbjct: 78  VRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANVVTYNAVISGMCEQGHV 137

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A+    +    GC P ++TY  L++ +C       A E++  M+   C PD VT+N++
Sbjct: 138 DSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTI 197

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++F C++G    A  V   +  +G  PNS TY+T++  L   G    +++ L+++NE + 
Sbjct: 198 ISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAG---KMEQALELLNEMAS 254

Query: 359 SP--TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
               T   Y +L   L K   ++  +   +++      P  V +NTVL  LC+ G  + A
Sbjct: 255 KGYNTDKMYQLLTESLNKEDKIEEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYA 314

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           + +L  +    C P  +TY  LI+GL+ +G +++A  L  ++
Sbjct: 315 IDVLADMVSYGCMPDELTYIILIEGLSYEGYLQEARELVSRL 356



 Score =  122 bits (306), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 69/251 (27%), Positives = 123/251 (49%), Gaps = 35/251 (13%)

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +++D+M      P V TYN++I+ +C+ G VD+A    N + S+ C+P+ V YNTVL  L
Sbjct: 2   ELIDLMRAEGCEPNVVTYNVIIDAMCREGDVDQARELLNSLPSRGCKPNTVNYNTVLKGL 61

Query: 408 C-----------------------------------KEGMLNEALQLLHLLNGSSCSPCL 432
           C                                   ++G+L +  + L  ++   C+  +
Sbjct: 62  CSIERWVDAEELLDEMVRENCPPNEATVNVIVNTLSRKGLLQKVTRYLEKMSKHGCTANV 121

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           +TYN +I G+ ++G ++ A+ L   M   G  PD +T+ TL+ G C ADQ E+A +L+ +
Sbjct: 122 VTYNAVISGMCEQGHVDSALELLSNMQSFGCKPDIVTYNTLLKGLCSADQWEDAEELMIK 181

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + +      N  +  +I  LC+   +  A +V + M      P+ T +STI+  +A  G 
Sbjct: 182 MSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQMPEKGCNPNSTTYSTIIGGLAKAGK 241

Query: 553 TEEAYKLWQKL 563
            E+A +L  ++
Sbjct: 242 MEQALELLNEM 252



 Score = 89.4 bits (220), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 60/216 (27%), Positives = 107/216 (49%), Gaps = 1/216 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+  CS  +  DA +L+  M++ + +PD      +I  L +   I +A +V + M
Sbjct: 158 TYNTLLKGLCSADQWEDAEELMIKMSQNDCLPDNVTFNTIISFLCQKGLILQAFEVFKQM 217

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P++ TY+ ++GGL K G++  A+ LL+EM+  G   D + Y  +  ++    K 
Sbjct: 218 PEKGCNPNSTTYSTIIGGLAKAGKMEQALELLNEMASKGYNTDKM-YQLLTESLNKEDKI 276

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++ +         G  P  + +  ++  +C+      AI+VL DM   GC PD +TY  L
Sbjct: 277 EEVVQVVHKLQDSGISPQTVLFNTVLLVLCRNGKTDYAIDVLADMVSYGCMPDELTYIIL 336

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
           +     +G   +A  +++ L SR +  NS+  N  L
Sbjct: 337 IEGLSYEGYLQEARELVSRLCSRDVLSNSLIKNEAL 372


>gi|302785562|ref|XP_002974552.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
 gi|300157447|gb|EFJ24072.1| hypothetical protein SELMODRAFT_101881 [Selaginella moellendorffii]
          Length = 495

 Score =  194 bits (493), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 124/423 (29%), Positives = 206/423 (48%), Gaps = 9/423 (2%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSV 215
           ++I  L  I   + AS+V +          T+ TYN  +  L K G    A  + D+M  
Sbjct: 6   DVIHVLENIKSPKLASRVFKWAARQEDFQHTVFTYNAYLNALVKGGHGSKARKIFDDMLY 65

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
             C P++ TY  +LR + D+ K   A+   +D   K   P      +L+  +CK   +  
Sbjct: 66  KECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDA 125

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A E+   ++ E CS D ++YN L    CK  + D A+ V   +    + P+ +TYN LL+
Sbjct: 126 AYELYKRLSDE-CSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLY 184

Query: 336 SLGSRGCWDAVDKILDIMNEASHS----PTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
                G  +    +L+ M E        P +++YN +I+G CK   +  A     +M+  
Sbjct: 185 GYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKS 244

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
            C P++VT+NT+L  LC  G L+EA  +   +   +C P  +TY  LI G A+   ++KA
Sbjct: 245 GCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKA 304

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
              +  M+  G+ P+  T+  LI G C A++VE+A+++LK +   G +     Y  VI  
Sbjct: 305 NDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGA 364

Query: 512 LCKSKKVDMAIQVLELMISSRY---KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           LCK  +++ A ++    + SR    KPD   +STIV  +       EAY+ + +++E K+
Sbjct: 365 LCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKL 424

Query: 569 FEK 571
             K
Sbjct: 425 VAK 427



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 196/402 (48%), Gaps = 10/402 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  L      G  + A K+ D M  +  +P+ +    ++RGL    + + A ++LQ M
Sbjct: 39  TYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDM 98

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P T   NM+V  LCK G++ +A  L   +S   C  D I+YN +   +    + 
Sbjct: 99  ESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYNMLTYGLCKADQI 157

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-----CSPDIV 293
            +A+  + +       P L+TY  L+   C+   + +A+ +L++M IEG       PD+ 
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEM-IEGKKGSDVVPDMY 216

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN++++  CK  +   A  V+  ++  G  PN +T+NTLL  L   G  D  + + + M
Sbjct: 217 SYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYM 276

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E +  PT  TY +LI G  +   +D+A + F  M+ +  +P++ TY  ++G LC    +
Sbjct: 277 VERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKV 336

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS---PDDITH 470
            +AL++L  ++ +   P ++TY  +I  L K G +E+A  L+   M +  +   PD   +
Sbjct: 337 EDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAY 396

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            T+++  CR  +  EA +    + +     +   Y+ +  GL
Sbjct: 397 STIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGL 438



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 108/389 (27%), Positives = 190/389 (48%), Gaps = 12/389 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L+  C   K   A +L+  M  +   P       L+  L +  +++ A ++ + +    
Sbjct: 78  VLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDEC 137

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            + D I+YNM+  GLCK  QI  A+A+  EM  +   P ++TYN +L      G+ +QA+
Sbjct: 138 SL-DRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAM 196

Query: 243 GFWKDQL--RKGCP--PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
              ++ +  +KG    P + +Y  +I   CK   +  A  VL  M   GCSP++VT+N+L
Sbjct: 197 TLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTL 256

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL--HSLGSRGCWDAVDKILDIMNEA 356
           ++  C  GK D+A  +   ++ R  EP ++TY  L+  H+   R    A D  +D++   
Sbjct: 257 LDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALR-IDKANDYFVDMLRRG 315

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P V+TY  LI GLC    V+ A+    +M S   +P++VTY  V+GALCK G +  A
Sbjct: 316 VE-PNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERA 374

Query: 417 LQLLHLLNGS---SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +L +   GS    C P    Y+T++  L ++    +A   + +M+E+ +      ++ +
Sbjct: 375 TKLFNDAMGSRTAKCKPDSYAYSTIVYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAM 434

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
             G     + E+   +  E    G +++ 
Sbjct: 435 ADGLELVQETEKVERVCLEASAHGIELQQ 463


>gi|357499119|ref|XP_003619848.1| CCP [Medicago truncatula]
 gi|355494863|gb|AES76066.1| CCP [Medicago truncatula]
          Length = 556

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/402 (28%), Positives = 210/402 (52%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           +C  G++  A  ++ I+ +R   P+      +++GL     ++KA      +   G + D
Sbjct: 129 YCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLD 188

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            + Y  ++ GLCK G+   A  LL EM     +P+++ YN I+ +   +    +A   + 
Sbjct: 189 EVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLYL 248

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             +  G  P ++TYT LI   C+        +++ +M  +  +P++ T+N L++  C++G
Sbjct: 249 KIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKG 308

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K  +A  + N ++ RG +P+ +T+NTL+      G      K+ D + E    P V++Y 
Sbjct: 309 KMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSYT 368

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           ILI G CK   +D A++ FN+M  KN   DIV Y++++  LCK G ++ A +L   +N  
Sbjct: 369 ILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINND 428

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P +ITYN LID   K   ++  + L+  M   G++P  +T+  LI G+C++ ++ EA
Sbjct: 429 GPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREA 488

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           ++LL  +  +     +  Y  +  GLCKS ++  A ++ ++M
Sbjct: 489 MNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVM 530



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 124/485 (25%), Positives = 228/485 (47%), Gaps = 38/485 (7%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F  +  K N KIL +F     + DA  L + +     +P       +I  ++++     A
Sbjct: 47  FFSHCPKQNAKILSSF---NGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVA 103

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +L+ MV  G  P   T ++ +   C  G++  A ++L  +   G +P+ IT  T+++ 
Sbjct: 104 ISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKG 163

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  NG+ ++A+ F  +   +G     + Y  LI  +CK      A ++L +M  +   P+
Sbjct: 164 LCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPN 223

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           IV YN +++  CK      A  +   ++  G++P+ +TY +L+      G W  V +++ 
Sbjct: 224 IVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMC 283

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M   + +P V+T+N+LI+  C+ G +  A   FN MV +  QPDIVT+NT++   C  G
Sbjct: 284 EMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHG 343

Query: 412 MLNEALQLL--------------------------------HLLNGSSCSPC---LITYN 436
            + EA +L                                  L N   C      ++ Y+
Sbjct: 344 NVLEARKLFDTVFERGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYS 403

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           +LIDGL K G +  A  L+  +  +G  P+ IT+  LI  FC+   ++  ++L K +  +
Sbjct: 404 SLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGK 463

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       Y ++I+G CKSK++  A+ +L +M S    PD   ++++   +   G   +A
Sbjct: 464 GLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDA 523

Query: 557 YKLWQ 561
           ++L++
Sbjct: 524 WELFK 528



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 109/403 (27%), Positives = 203/403 (50%), Gaps = 6/403 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++  C  G++  A    D +A +  + D      LI GL +I R   A ++LQ M
Sbjct: 156 TLTTVMKGLCINGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEM 215

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+ + YNM++   CK      A  L  ++   G +PD++TY +++R     G++
Sbjct: 216 EGQVVKPNIVIYNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQW 275

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +      + + K   P + T+ +LI+  C++  +  A  + + M   G  PDIVT+N+L
Sbjct: 276 GEVKQLMCEMVNKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTL 335

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C  G   +A  + + +  RG+ P+  +Y  L+  +G   C   +D+ + + NE   
Sbjct: 336 ISGHCLHGNVLEARKLFDTVFERGILPDVWSYTILI--IGYCKC-KRIDEAVSLFNEMRC 392

Query: 359 SPTVF---TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              V     Y+ LI+GLCK G +  A   F+ + +    P+++TYN ++ A CK   ++ 
Sbjct: 393 KNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDM 452

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            ++L  L+ G   +P ++TYN LI+G  K   + +AM L   M    ++PD IT+ +L  
Sbjct: 453 GIELFKLMCGKGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFD 512

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           G C++ ++ +A +L K +   G  +  + Y +++   CK++ V
Sbjct: 513 GLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLDAFCKAQDV 555



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 105/368 (28%), Positives = 172/368 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE     ++   C  G+  DA +L+  M  +   P+      +I    + +   KA  + 
Sbjct: 188 DEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKARDLY 247

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +V  G  PD +TY  ++ G C+ GQ      L+ EM      P+V T+N ++      
Sbjct: 248 LKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAFCRK 307

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A G +   +++G  P ++T+  LI   C    +  A ++ D +   G  PD+ +Y
Sbjct: 308 GKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDVWSY 367

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+   CK  + D+AV + N +  + M  + + Y++L+  L   G      ++   +N 
Sbjct: 368 TILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFSTINN 427

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V TYNILI+  CK   +D  I  F  M  K   P ++TYN ++   CK   + E
Sbjct: 428 DGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILINGYCKSKRIRE 487

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+ LL ++   + +P  ITYN+L DGL K G +  A  L+  M   G   D  T+  L+ 
Sbjct: 488 AMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPVDVATYNVLLD 547

Query: 476 GFCRADQV 483
            FC+A  V
Sbjct: 548 AFCKAQDV 555



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 97/361 (26%), Positives = 172/361 (47%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           I  A+ L + +      P VI +NTI+ ++        AI   K  + KG  P + T +I
Sbjct: 65  IDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSI 124

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
            I   C    +  A  VL  +   G  P+ +T  +++   C  G+   A+   +N+ ++G
Sbjct: 125 WINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHDNVAAQG 184

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           M  + + Y TL++ L   G      ++L  M      P +  YN++I+  CK  L  +A 
Sbjct: 185 MLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDELTCKAR 244

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           + + ++V     PDI+TY +++   C+ G   E  QL+  +   + +P + T+N LID  
Sbjct: 245 DLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTFNVLIDAF 304

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            +KG M +A  ++  M++ G  PD +T  TLI G C    V EA  L   + +RG     
Sbjct: 305 CRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFERGILPDV 364

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            +Y ++I G CK K++D A+ +   M       D  ++S+++  +   G    A++L+  
Sbjct: 365 WSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISYAWELFST 424

Query: 563 L 563
           +
Sbjct: 425 I 425



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/314 (26%), Positives = 147/314 (46%), Gaps = 1/314 (0%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           +T K+ D  L   D   ++ D  T   +++ FC  G+  +  +L+  M  +N  P+ +  
Sbjct: 239 LTCKARDLYLKIVDMG-IDPDILTYTSLIRGFCRTGQWGEVKQLMCEMVNKNINPNVYTF 297

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
             LI    R  ++ +A  +  +MV  G  PD +T+N ++ G C  G +  A  L D +  
Sbjct: 298 NVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVLEARKLFDTVFE 357

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G  PDV +Y  ++       +  +A+  + +   K     ++ Y+ LI+ +CK   I+ 
Sbjct: 358 RGILPDVWSYTILIIGYCKCKRIDEAVSLFNEMRCKNMVLDIVLYSSLIDGLCKSGRISY 417

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A E+   +  +G  P+++TYN L++  CK    D  + +   +  +G+ P  +TYN L++
Sbjct: 418 AWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCGKGLTPTVLTYNILIN 477

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                        +L +M   + +P   TYN L +GLCK G +  A   F  M       
Sbjct: 478 GYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISDAWELFKVMHVGGPPV 537

Query: 396 DIVTYNTVLGALCK 409
           D+ TYN +L A CK
Sbjct: 538 DVATYNVLLDAFCK 551



 Score =  125 bits (313), Expect = 7e-26,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 141/318 (44%), Gaps = 40/318 (12%)

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P +I +  +I  V K      AI +L  M  +G +P I T +  +N  C  G+   A  V
Sbjct: 82  PSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPSIFTLSIWINCYCHLGEMGFAFSV 141

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +  +L RG +PN+IT  T++                                    GLC 
Sbjct: 142 LGIVLKRGYQPNNITLTTVM-----------------------------------KGLCI 166

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G V +A++  + + ++    D V Y T++  LCK G   +A QLL  + G    P ++ 
Sbjct: 167 NGEVQKAMDFHDNVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVI 226

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           YN +ID   K     KA  LY ++++ GI PD +T+ +LI GFCR  Q  E   L+ E+ 
Sbjct: 227 YNMIIDSFCKDELTCKARDLYLKIVDMGIDPDILTYTSLIRGFCRTGQWGEVKQLMCEMV 286

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
            +        + ++I   C+  K+  A  +  LM+    +PD   F+T++      G   
Sbjct: 287 NKNINPNVYTFNVLIDAFCRKGKMIEAQGMFNLMVKRGQQPDIVTFNTLISGHCLHGNVL 346

Query: 555 EAYKLWQKLIEWKVFEKG 572
           EA KL+       VFE+G
Sbjct: 347 EARKLFD-----TVFERG 359



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 49/194 (25%), Positives = 99/194 (51%)

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           L  +  +D A+  FN +++    P ++ +NT++G++ K      A+ LL  +     +P 
Sbjct: 59  LSSFNGIDDAVTLFNHLINMQPLPSVIQFNTIIGSVVKMKHCPVAISLLKQMVFKGVTPS 118

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           + T +  I+     G M  A  + G +++ G  P++IT  T++ G C   +V++A+D   
Sbjct: 119 IFTLSIWINCYCHLGEMGFAFSVLGIVLKRGYQPNNITLTTVMKGLCINGEVQKAMDFHD 178

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            +  +G  +    Y  +I+GLCK  +   A Q+L+ M     KP+  +++ I+     D 
Sbjct: 179 NVAAQGMLLDEVCYGTLINGLCKIGRSIDAFQLLQEMEGQVVKPNIVIYNMIIDSFCKDE 238

Query: 552 MTEEAYKLWQKLIE 565
           +T +A  L+ K+++
Sbjct: 239 LTCKARDLYLKIVD 252



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/154 (26%), Positives = 73/154 (47%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           + ++   C  G+++ A +L   +      P+      LI    +I  I+   ++ ++M  
Sbjct: 403 SSLIDGLCKSGRISYAWELFSTINNDGPPPNVITYNILIDAFCKIQDIDMGIELFKLMCG 462

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  +TYN+++ G CK  +IR A+ LL  M      PD ITYN++   +  +G+   
Sbjct: 463 KGLTPTVLTYNILINGYCKSKRIREAMNLLSVMQSKNLAPDSITYNSLFDGLCKSGRISD 522

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           A   +K     G P  + TY +L++  CK   +A
Sbjct: 523 AWELFKVMHVGGPPVDVATYNVLLDAFCKAQDVA 556


>gi|297838419|ref|XP_002887091.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297332932|gb|EFH63350.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 568

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 114/392 (29%), Positives = 194/392 (49%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+G      IEK+  +L  +   G  P+ + Y  ++ G CKRG+I  A  L  EM   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFG 228

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              +  TY  ++  +F NG  KQ    ++     G  P L TY  ++ Q CK      A 
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAF 288

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++ D+M   G S +IVTYN+L+   C++ K ++A  V++ + S G+ PN ITYNTL+   
Sbjct: 289 KLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGF 348

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G       +   +     SP++ TYNIL++G CK G    A     +M  +  +P  
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +TY  ++    +   + +A+QL   +     +P + TY+ LI G   KG M +A  L+  
Sbjct: 409 ITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKL 468

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+   + P+ + + T++ G+C+      A+ L +E+ ++      ++YR +I  LCK +K
Sbjct: 469 MVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
              A  ++E MI +   P D++ + I +   D
Sbjct: 529 SKEAEGLVEKMIDTGIDPSDSILNLISRAKND 560



 Score =  184 bits (466), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 108/380 (28%), Positives = 192/380 (50%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D  ++ +++ G C+ G+I  +  LL E+   G  P+V+ Y T++      G+ ++A   +
Sbjct: 162 DVYSFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLF 221

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
            +  + G      TYT+LI  + K     +  E+ + M  +G  P++ TYN ++N  CK 
Sbjct: 222 FEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKD 281

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTY 365
           G+  DA  + + +  RG+  N +TYNTL+  L      +  +K++D M     +P + TY
Sbjct: 282 GRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITY 341

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
           N LI+G C  G + +A++    + S+   P +VTYN ++   CK+G  + A +++  +  
Sbjct: 342 NTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEE 401

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P  ITY  LID  A+   MEKA+ L   M E G++PD  T+  LI GFC   Q+ E
Sbjct: 402 RGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNE 461

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A  L K +  +  +     Y  ++ G CK      A+++   M      P+   +  +++
Sbjct: 462 ASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIE 521

Query: 546 KVADDGMTEEAYKLWQKLIE 565
            +  +  ++EA  L +K+I+
Sbjct: 522 VLCKERKSKEAEGLVEKMID 541



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 188/371 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C  G++  +  L+  +      P+      LI G  +   IEKA  +   M   G
Sbjct: 169 VIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFG 228

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            V +  TY +++ GL K G  +    + ++M   G  P++ TYN ++     +G+ K A 
Sbjct: 229 LVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCVMNQHCKDGRTKDAF 288

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   +G    ++TY  LI  +C++     A +V+D M  +G +P+++TYN+L++  
Sbjct: 289 KLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGF 348

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  GK   A+ +  +L SRG+ P+ +TYN L+     +G      K++  M E    P+ 
Sbjct: 349 CGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSK 408

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY ILI+   +   +++AI   + M      PD+ TY+ ++   C +G +NEA +L  L
Sbjct: 409 ITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQMNEASRLFKL 468

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  + YNT++ G  K+G   +A+ L+ +M E  + P+  ++R +I   C+  +
Sbjct: 469 MVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYMIEVLCKERK 528

Query: 483 VEEAVDLLKEI 493
            +EA  L++++
Sbjct: 529 SKEAEGLVEKM 539



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 106/380 (27%), Positives = 191/380 (50%), Gaps = 3/380 (0%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD-Q 248
           Y +M+    +   + S+I+  +EM   G  P    +N +L  +  +  F Q   F+ + +
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFNQWWRFFNESK 156

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           ++     Y  ++ I+I+  C+   I ++ ++L ++   G SP++V Y +L++  CK+G+ 
Sbjct: 157 IKVDLDVY--SFGIVIKGCCEAGEIEKSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEI 214

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           + A  +   +   G+  N  TY  L+H L   G      ++ + M E    P ++TYN +
Sbjct: 215 EKAKDLFFEMGKFGLVANEWTYTVLIHGLFKNGIKKQGFEMYEKMQEDGVFPNLYTYNCV 274

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           +N  CK G    A   F++M  +    +IVTYNT++G LC+E   NEA +++  +     
Sbjct: 275 MNQHCKDGRTKDAFKLFDEMRERGVSCNIVTYNTLIGGLCREMKANEANKVMDQMKSDGI 334

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P LITYNTLIDG    G + KA+ L   +   G+SP  +T+  L+ GFC+      A  
Sbjct: 335 NPNLITYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGK 394

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           ++KE+ +RG K     Y ++I    +   ++ AIQ+   M      PD   +S ++    
Sbjct: 395 VVKEMEERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFC 454

Query: 549 DDGMTEEAYKLWQKLIEWKV 568
             G   EA +L++ ++  K+
Sbjct: 455 IKGQMNEASRLFKLMVAKKL 474



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 68/273 (24%), Positives = 120/273 (43%), Gaps = 42/273 (15%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C   K  +A+K++D M      P+      LI G   + ++ KA  + + +
Sbjct: 305 TYNTLIGGLCREMKANEANKVMDQMKSDGINPNLITYNTLIDGFCGVGKLGKALSLCRDL 364

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P  +TYN++V G CK+G    A  ++ EM   G +P  IT              
Sbjct: 365 KSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEMEERGIKPSKIT-------------- 410

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
                                YTILI+   +   + +AI++   M   G +PD+ TY+ L
Sbjct: 411 ---------------------YTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVL 449

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C +G+ ++A  +   ++++ +EPN + YNT++      G      ++   M E   
Sbjct: 450 IHGFCIKGQMNEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKEL 509

Query: 359 SPTVFTYNILINGLCK-------YGLVDRAINS 384
            P V +Y  +I  LCK        GLV++ I++
Sbjct: 510 PPNVASYRYMIEVLCKERKSKEAEGLVEKMIDT 542



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/215 (24%), Positives = 94/215 (43%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  FC  GKL  A  L   +  R   P       L+ G  +      A KV++ M
Sbjct: 340 TYNTLIDGFCGVGKLGKALSLCRDLKSRGLSPSLVTYNILVSGFCKKGDTSGAGKVVKEM 399

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P  ITY +++    +   +  AI L   M   G  PDV TY+ ++      G+ 
Sbjct: 400 EERGIKPSKITYTILIDTFARMDNMEKAIQLRSPMEELGLTPDVHTYSVLIHGFCIKGQM 459

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   +K  + K   P  + Y  ++   CK+    RA+ +  +M  +   P++ +Y  +
Sbjct: 460 NEASRLFKLMVAKKLEPNKVIYNTMVLGYCKEGSSYRALRLFREMEEKELPPNVASYRYM 519

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
           +   CK+ K  +A  ++  ++  G++P+    N +
Sbjct: 520 IEVLCKERKSKEAEGLVEKMIDTGIDPSDSILNLI 554



 Score = 50.1 bits (118), Expect = 0.003,   Method: Compositional matrix adjust.
 Identities = 43/205 (20%), Positives = 83/205 (40%), Gaps = 36/205 (17%)

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y ++IN   +   +D +I+ FN+MV K   P    +N +L  +      N   Q     N
Sbjct: 97  YEVMINAYVQSQSLDSSISYFNEMVDKGFVPGSNCFNNLLTFVVGSSSFN---QWWRFFN 153

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
            S     L  Y+    G+  KGC                              C A ++E
Sbjct: 154 ESKIKVDLDVYSF---GIVIKGC------------------------------CEAGEIE 180

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           ++ DLL E+ + G       Y  +I G CK  +++ A  +   M       ++  ++ ++
Sbjct: 181 KSFDLLVELREFGFSPNVVIYTTLIDGCCKRGEIEKAKDLFFEMGKFGLVANEWTYTVLI 240

Query: 545 KKVADDGMTEEAYKLWQKLIEWKVF 569
             +  +G+ ++ +++++K+ E  VF
Sbjct: 241 HGLFKNGIKKQGFEMYEKMQEDGVF 265


>gi|297733951|emb|CBI15198.3| unnamed protein product [Vitis vinifera]
          Length = 948

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 113/377 (29%), Positives = 186/377 (49%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +P    C  ++ GL++  R +   KV   MV  G  P+ +TY  ++ G C++G    A  
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           L DEM      P V+ Y  ++R +    +  +A   ++     G  P L TY  +++  C
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   + +A+E+  +M  +G  P++VT+  L++  CK  +   A   + ++ S G+ PN  
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            YN L+      G       +   + +    P VFTY+ILI GLC    ++ A     +M
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             K   P+ VTYNT++   CKEG + +A+++   +      P +IT++TLIDG  K G M
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E AM LY +M+  G+ PD + +  LI G  +    +EA  L KE+ + G          +
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 509 IHGLCKSKKVDMAIQVL 525
           I GLCK  ++  AI++ 
Sbjct: 515 IDGLCKDGRISDAIKLF 531



 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/377 (30%), Positives = 188/377 (49%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           +P     NM++ GL K+G+  +   +  +M   G  P+V+TY T++      G F +A  
Sbjct: 155 LPAMQACNMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFR 214

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            + + + K   P ++ YTILI  +C +  I+ A  +   M   G  P++ TYN++++  C
Sbjct: 215 LFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYC 274

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K      A+ +   +L  G+ PN +T+  L+  L       +  K L  M      P +F
Sbjct: 275 KIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIF 334

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
            YN LI+G CK G +  A++  +++      PD+ TY+ ++  LC    + EA  LL  +
Sbjct: 335 VYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEM 394

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P  +TYNTLIDG  K+G MEKA+ +  QM E GI P+ IT  TLI G+C+A ++
Sbjct: 395 KKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKM 454

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           E A+ L  E+  +G      AY  +I G  K      A ++ + M  +   P+    S +
Sbjct: 455 EAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCL 514

Query: 544 VKKVADDGMTEEAYKLW 560
           +  +  DG   +A KL+
Sbjct: 515 IDGLCKDGRISDAIKLF 531



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 112/393 (28%), Positives = 191/393 (48%), Gaps = 6/393 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L     +G+     K+   M  R   P+      LI G  R     KA ++   M+ 
Sbjct: 162 NMVLDGLVKKGRFDTMWKVYGDMVARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIE 221

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P  + Y +++ GLC   +I  A ++   M  SG  P++ TYNT++         K+
Sbjct: 222 KKIFPTVVIYTILIRGLCGESRISEAESMFRTMRNSGMLPNLYTYNTMMDGYCKIAHVKK 281

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +++ L  G  P ++T+ ILI+ +CK   +  A + L DMA  G  P+I  YN L++
Sbjct: 282 ALELYQEMLGDGLLPNVVTFGILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLID 341

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G   +A+ + + +    + P+  TY+ L+  L      +  D +L  M +    P
Sbjct: 342 GYCKAGNLSEALSLHSEIEKHEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLP 401

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN LI+G CK G +++AI   +QM  K  +P+I+T++T++   CK G +  A+ L 
Sbjct: 402 NAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLY 461

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++ Y  LIDG  K G  ++A  L+ +M E G+ P+  T   LI G C+ 
Sbjct: 462 TEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKD 521

Query: 481 DQVEEAVDLL------KEIGKRGNKMRNSAYRL 507
            ++ +A+ L          G + N++  S Y++
Sbjct: 522 GRISDAIKLFLAKTGTDTTGSKTNELDRSLYQM 554



 Score =  166 bits (419), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 96/337 (28%), Positives = 162/337 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C +G    A +L D M  +   P       LIRGL    RI +A  + + M
Sbjct: 195 TYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRISEAESMFRTM 254

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG +P+  TYN M+ G CK   ++ A+ L  EM   G  P+V+T+  ++  +    + 
Sbjct: 255 RNSGMLPNLYTYNTMMDGYCKIAHVKKALELYQEMLGDGLLPNVVTFGILIDGLCKTDEM 314

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F  D    G  P +  Y  LI+  CK   ++ A+ +  ++      PD+ TY+ L
Sbjct: 315 VSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEKHEILPDVFTYSIL 374

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C   + ++A  ++  +  +G  PN++TYNTL+      G  +   ++   M E   
Sbjct: 375 IKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEKAIEVCSQMTEKGI 434

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + T++ LI+G CK G ++ A+  + +MV K   PD+V Y  ++    K+G   EA +
Sbjct: 435 EPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAFR 494

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           L   +  +   P + T + LIDGL K G +  A+ L+
Sbjct: 495 LHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 105/380 (27%), Positives = 187/380 (49%), Gaps = 11/380 (2%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           + +++    + G +  A+ +  +M V    P +   N +L  +   G+F      + D +
Sbjct: 129 FGVLIIAFSEMGLVEEALWVYYKMDVL---PAMQACNMVLDGLVKKGRFDTMWKVYGDMV 185

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            +G  P ++TY  LI+  C+Q    +A  + D+M  +   P +V Y  L+   C + +  
Sbjct: 186 ARGASPNVVTYGTLIDGCCRQGDFLKAFRLFDEMIEKKIFPTVVIYTILIRGLCGESRIS 245

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA-VDKILDIMNEASHS---PTVFTY 365
           +A  +   + + GM PN  TYNT++       C  A V K L++  E       P V T+
Sbjct: 246 EAESMFRTMRNSGMLPNLYTYNTMMDGY----CKIAHVKKALELYQEMLGDGLLPNVVTF 301

Query: 366 NILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
            ILI+GLCK   +  A      M S    P+I  YN ++   CK G L+EAL L   +  
Sbjct: 302 GILIDGLCKTDEMVSARKFLIDMASFGVVPNIFVYNCLIDGYCKAGNLSEALSLHSEIEK 361

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
               P + TY+ LI GL     ME+A  L  +M + G  P+ +T+ TLI G+C+   +E+
Sbjct: 362 HEILPDVFTYSILIKGLCGVDRMEEADGLLQEMKKKGFLPNAVTYNTLIDGYCKEGNMEK 421

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+++  ++ ++G +     +  +I G CK+ K++ A+ +   M+     PD   ++ ++ 
Sbjct: 422 AIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALID 481

Query: 546 KVADDGMTEEAYKLWQKLIE 565
               DG T+EA++L +++ E
Sbjct: 482 GHFKDGNTKEAFRLHKEMQE 501



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 99/473 (20%), Positives = 186/473 (39%), Gaps = 47/473 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +C  G +  A ++   M  +   P+      LI G  +  ++E A  +   M
Sbjct: 405 TYNTLIDGYCKEGNMEKAIEVCSQMTEKGIEPNIITFSTLIDGYCKAGKMEAAMGLYTEM 464

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V+ G +PD + Y  ++ G  K G  + A  L  EM  +G  P+V T + ++  +  +G+ 
Sbjct: 465 VIKGLLPDVVAYTALIDGHFKDGNTKEAFRLHKEMQEAGLHPNVFTLSCLIDGLCKDGRI 524

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA------------IEVLDDMAIE 286
             AI  +    + G          L   + + C +A +            I V    A  
Sbjct: 525 SDAIKLF--LAKTGTDTTGSKTNELDRSLYQMCSLALSLFRGISEPCICVIRVTKLFATN 582

Query: 287 GCSPDIVTYNSL----VNFSCK---QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
              P    +  L     N + K   Q      VL+   +L R   P+SI   +L+ +L +
Sbjct: 583 N-QPKAHLHTHLKPPKSNQTLKRYLQSSNTSKVLLFFRILLRK-NPSSIDSFSLMFALKA 640

Query: 340 ---RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +       ++  ++      P +F    LI+     G V  A N F+++ SKN    
Sbjct: 641 CTLKSSLVEGKQMHALVINFGFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKN---- 696

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           ++++ +V+ A       N+ALQL   +      P ++T    +   A  G ++    ++ 
Sbjct: 697 LISWTSVISAYVDNQRPNKALQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHA 756

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEA----VDLLKEIGKRGNKMRNSAYRLVIHG- 511
            +   G+  D   + +LI  + +  ++  A    + L  ++   G  M  S   LV  G 
Sbjct: 757 YIRHRGLDTDLCLNNSLINMYSKCGEIGTARRFSLVLPNDVTFMGVLMACSHAGLVEEGK 816

Query: 512 -LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
              +S K D ++           +P  + F  +V  +   G+  EAY+   K+
Sbjct: 817 QHFRSMKEDYSL-----------RPRISHFGCMVDLLCRAGLLTEAYEFILKM 858



 Score = 43.5 bits (101), Expect = 0.28,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 48/98 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +  T + ++  +C  GK+  A  L   M  +  +PD      LI G  +    ++A 
Sbjct: 434 IEPNIITFSTLIDGYCKAGKMEAAMGLYTEMVIKGLLPDVVAYTALIDGHFKDGNTKEAF 493

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           ++ + M  +G  P+  T + ++ GLCK G+I  AI L 
Sbjct: 494 RLHKEMQEAGLHPNVFTLSCLIDGLCKDGRISDAIKLF 531



 Score = 43.5 bits (101), Expect = 0.31,   Method: Compositional matrix adjust.
 Identities = 46/245 (18%), Positives = 98/245 (40%), Gaps = 14/245 (5%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G EP +    +++      G    A   + +   K     LI++T +I          +A
Sbjct: 661 GFEPIIFLQTSLISMYSATGNVADAHNMFDEIPSKN----LISWTSVISAYVDNQRPNKA 716

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           +++   M ++   PDIVT    ++     G  D    +   +  RG++ +    N+L++ 
Sbjct: 717 LQLFRQMQMDDVQPDIVTVTVALSACADLGALDMGEWIHAYIRHRGLDTDLCLNNSLINM 776

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQP 395
               G      +   ++      P   T+  ++      GLV+     F  M    + +P
Sbjct: 777 YSKCGEIGTARRFSLVL------PNDVTFMGVLMACSHAGLVEEGKQHFRSMKEDYSLRP 830

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
            I  +  ++  LC+ G+L EA + +  +      P  + + TL+   + +G  +K M++ 
Sbjct: 831 RISHFGCMVDLLCRAGLLTEAYEFILKM---PVRPNAVVWRTLLGACSLQGMWDKKMLVR 887

Query: 456 GQMME 460
            Q+ +
Sbjct: 888 NQIKQ 892


>gi|147803305|emb|CAN75473.1| hypothetical protein VITISV_002797 [Vitis vinifera]
          Length = 1356

 Score =  194 bits (492), Expect = 1e-46,   Method: Compositional matrix adjust.
 Identities = 125/439 (28%), Positives = 211/439 (48%), Gaps = 4/439 (0%)

Query: 123 ILQNFCSRGKLTDA--SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           IL++ C  G  + +    L+D     N IP       LIR  ++   I+ A +  +++ +
Sbjct: 134 ILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDL--LIRVYLKEGMIDYAVETFELVGL 191

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P   T NM++  + K  +     +L  EMS  G  P+V T+N ++  +   G  K+
Sbjct: 192 VGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLKK 251

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A    K     G  P ++TY  L+   CK+     AIE++D M  +G   D+ TYN  ++
Sbjct: 252 AGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFID 311

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C   +   A L++  +    + PN +TYNTL++     G      ++ + M++   SP
Sbjct: 312 NLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSP 371

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN LI G C  G  + A+   + M +   + + VTY T+L  LCK      A +LL
Sbjct: 372 NCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLL 431

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  +      I Y  LIDGL K G +++A+ L G M ++G++PD IT+ +LI GFCR 
Sbjct: 432 ERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRV 491

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             ++ A +++  + + G  +    Y  +I+  C+   V  A++V  +M  + +  D    
Sbjct: 492 GNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTC 551

Query: 541 STIVKKVADDGMTEEAYKL 559
           + +V  +  DG   EA K 
Sbjct: 552 NVLVSSLCRDGKLGEAEKF 570



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 215/443 (48%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +   G +  A +  +++      P  + C  ++  +++  R E    + + M   G
Sbjct: 169 LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG 228

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  T+N+++ GLC  G ++ A  LL +M  +G  P ++TYNT+L      G++K AI
Sbjct: 229 ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 288

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 + KG    + TY + I+ +C     A+A  +L  M  E  SP+ VTYN+L+N  
Sbjct: 289 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 348

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+GK   A  V N +    + PN +TYN L+      G ++   ++LD M  A      
Sbjct: 349 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 408

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY  L+NGLCK+   + A     +M   +     + Y  ++  LCK GML+EA+QL+  
Sbjct: 409 VTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 468

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P +ITY++LI+G  + G ++ A  +  +M  +G+  + I + TLI+ FC+   
Sbjct: 469 MYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN 528

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V EA+ +   +   G+   +    +++  LC+  K+  A + L  M      P+   +  
Sbjct: 529 VTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDC 588

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           I+      G    A+  +  +I+
Sbjct: 589 IINGYGSIGDPLNAFSFFDDMIK 611



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 209/460 (45%), Gaps = 1/460 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T + ++  FC  G +  A ++I  M R   + +      LI    +   + +A 
Sbjct: 474 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 533

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           KV  +M  +G   D  T N++V  LC+ G++  A   L  MS  G  P+ ITY+ I+   
Sbjct: 534 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 593

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A  F+ D ++ G  P   TY  L++ +CK   +  A + L+ +     + D 
Sbjct: 594 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 653

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILD 351
           V YN+L+  +CK G   +AV + + ++   + P+S TY++LL  L  +G    AV     
Sbjct: 654 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 713

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M   +  P    Y  L++GL K G    A   F +M+ K   PD V +N ++ +  + G
Sbjct: 714 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 773

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            + +A      +      P L TYN L+ G +KK  + + + LY  MM  GI PD +T  
Sbjct: 774 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 833

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +LI G  ++   +  V LL ++   G       + ++I+   +S K+  A  ++  M + 
Sbjct: 834 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 893

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
              PD   ++ I   +       E+  +  +++E  V  K
Sbjct: 894 GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPK 933



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 134/514 (26%), Positives = 231/514 (44%), Gaps = 22/514 (4%)

Query: 58  CRGLPGNVCIDRV--NEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVEN 115
           C+G+  +VC   V  + +  +  S+++++L   KK+R   I+                  
Sbjct: 296 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLL--KKMRKEMISP----------------- 336

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++  F   GK+  A+++ + M++ +  P+      LI G   +   E+A ++L
Sbjct: 337 NEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLL 396

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +G   + +TY  ++ GLCK  +   A  LL+ M V+      I Y  ++  +  N
Sbjct: 397 DHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKN 456

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A+    +  + G  P +ITY+ LI   C+   I  A E++  M   G   + + Y
Sbjct: 457 GMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIY 516

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L+   C+ G   +A+ V   +   G   +  T N L+ SL   G     +K L  M+ 
Sbjct: 517 STLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 576

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TY+ +ING    G    A + F+ M+     P   TY ++L  LCK G L E
Sbjct: 577 IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVE 636

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A + L+ L+    +   + YNTL+    K G + +A+ L+ +M++N + PD  T+ +L+ 
Sbjct: 637 AKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLT 696

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
           G CR  +   AV L      RG    N   Y  ++ GL K+     A    E M+     
Sbjct: 697 GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 756

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           PD   F+ I+   +  G   +A   +  +  W V
Sbjct: 757 PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGV 790



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 114/452 (25%), Positives = 207/452 (45%), Gaps = 35/452 (7%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL     ++KA  +L+ M  +G VP  +TYN ++   CK+G+ ++AI L+D M   G
Sbjct: 239 LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 298

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            E DV TYN  +  +  N +  +A    K   ++   P  +TY  LI    K+  I  A 
Sbjct: 299 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 358

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +V ++M+    SP+ VTYN+L+   C  G +++A+ +++++ + G+  N +TY TLL+ L
Sbjct: 359 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 418

Query: 338 GSRGCWDAVDKILD-------------------------IMNEASH----------SPTV 362
                ++   ++L+                         +++EA            +P V
Sbjct: 419 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 478

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+ LING C+ G +  A     +M       + + Y+T++   C+ G + EA+++  +
Sbjct: 479 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAV 538

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +N +       T N L+  L + G + +A      M   G+ P+ IT+  +I G+     
Sbjct: 539 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 598

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
              A     ++ K G       Y  ++ GLCK   +  A + L  +       D  +++T
Sbjct: 599 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDSVMYNT 658

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           ++ +    G   EA  L+ K+++  V     T
Sbjct: 659 LLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 690



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 198/451 (43%), Gaps = 1/451 (0%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D    N +L   C  G L +A  L D M + N +PD +   +L+ GL R  +   A  + 
Sbjct: 652  DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 711

Query: 176  QIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
               +  G + P+ + Y  +V GL K G  ++A    +EM   G  PD + +N I+ +   
Sbjct: 712  GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSR 771

Query: 235  NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             G+  +A  F+      G  P L TY IL+    K+  + R + +   M  EG  PD +T
Sbjct: 772  RGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLT 831

Query: 295  YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
            ++SL+    K G  D  V ++  ++  G   +  T+N L++     G       +++ MN
Sbjct: 832  FHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMN 891

Query: 355  EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                 P   TYN + NGL K      +    ++M+     P    Y T++  +C+ G + 
Sbjct: 892  TLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQ 951

Query: 415  EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
             A +L   +         +  + ++ GL   G  E AM++   M+   + P   T  TL+
Sbjct: 952  GAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLM 1011

Query: 475  WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              FCR  ++ EA+ L   +   G K+   AY ++I G+C +     A ++ E M      
Sbjct: 1012 HRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLC 1071

Query: 535  PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            P+ T ++ +V  ++      +  KL   L E
Sbjct: 1072 PNITTYAVLVDAISAANNLIQGEKLLTDLQE 1102



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 111/470 (23%), Positives = 204/470 (43%), Gaps = 36/470 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ NFC  G +T+A K+  +M       D   C  L+  L R  ++ +A K L  M   G
Sbjct: 519 LIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIG 578

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VP++ITY+ ++ G    G   +A +  D+M   G  P   TY ++L+ +   G   +A 
Sbjct: 579 LVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAK 638

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            F             + Y  L+ + CK   +  A+ + D M      PD  TY+SL+   
Sbjct: 639 KFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGL 698

Query: 303 CKQGKYDDAVLVINNLLSRGME------------------------------------PN 326
           C++GK   AV +    + RG                                      P+
Sbjct: 699 CRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPD 758

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           ++ +N ++ S   RG     +     M      P + TYNIL++G  K   + R ++ ++
Sbjct: 759 TVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYS 818

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M+ +   PD +T+++++  L K G+ +  ++LL  +          T+N LI+  ++ G
Sbjct: 819 TMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESG 878

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            M KA  L   M   G+ PD  T+  +  G  +     E+  +L E+ + G   +++ Y 
Sbjct: 879 KMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYI 938

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
            +I+G+C+   +  A ++ + M +  +   +   S +V+ +   G TE+A
Sbjct: 939 TLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDA 988



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/418 (23%), Positives = 171/418 (40%), Gaps = 36/418 (8%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDI-MARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
            D  T + +L   C +GK   A  L    M R    P+      L+ GL +    + A   
Sbjct: 687  DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 746

Query: 175  LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR---- 230
             + M+  G  PDT+ +N ++    +RGQ+  A      M   G  P++ TYN +L     
Sbjct: 747  FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 806

Query: 231  ------------TMFDNGKFKQAIGFWKDQL---RKGCPPYLI----------------T 259
                        TM   G F   + F    L   + G P   +                T
Sbjct: 807  KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFT 866

Query: 260  YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
            + ILI +  +   + +A ++++ M   G  PD  TYN + N   K+  + ++ +V++ +L
Sbjct: 867  FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 926

Query: 320  SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
              G+ P    Y TL++ +   G      K+ D M            + ++ GL   G  +
Sbjct: 927  ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 986

Query: 380  RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
             A+   + M+     P I T+ T++   C++  + EAL+L  ++        ++ YN LI
Sbjct: 987  DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1046

Query: 440  DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
             G+   G    A  LY +M    + P+  T+  L+     A+ + +   LL ++ +RG
Sbjct: 1047 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1104



 Score = 99.8 bits (247), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 141/348 (40%), Gaps = 41/348 (11%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCINLIRGLIRIDRIEKASKVL 175
            T N +L  F  +  L     L   M R    PD   FH   +LI GL +    +   K+L
Sbjct: 796  TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH---SLILGLSKSGIPDLGVKLL 852

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              M+M G + D  T+N+++    + G++R A  L++ M+  G  PD  TYN I   +   
Sbjct: 853  GKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK 912

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              F+++     + L  G  P    Y  LI  +C+   I  A ++ D+M   G     V  
Sbjct: 913  SAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAE 972

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +++V      GK +DA+LV++++L   +                                
Sbjct: 973  SAMVRGLLHCGKTEDAMLVLDHMLRMRL-------------------------------- 1000

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                PT+ T+  L++  C+   +  A+     M     + D+V YN ++  +C  G    
Sbjct: 1001 ---LPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAA 1057

Query: 416  ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
            A +L   +      P + TY  L+D ++    + +   L   + E G+
Sbjct: 1058 AFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1105


>gi|359493281|ref|XP_002272603.2| PREDICTED: pentatricopeptide repeat-containing protein At5g55840-like
            [Vitis vinifera]
          Length = 2037

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 126/440 (28%), Positives = 212/440 (48%), Gaps = 6/440 (1%)

Query: 123  ILQNFCSRGKLTDA--SKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMV 179
            IL++ C  G  + +    L+D     N IP  F     LIR  ++   I+ A +  +++ 
Sbjct: 885  ILRHLCQMGIGSKSIFGALMDTYPLCNSIPSVFDL---LIRVYLKEGMIDYAVETFELVG 941

Query: 180  MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            + G  P   T NM++  + K  +     +L  EMS  G  P+V T+N ++  +   G  K
Sbjct: 942  LVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKGICPNVGTFNILINGLCVEGNLK 1001

Query: 240  QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            +A    K     G  P ++TY  L+   CK+     AIE++D M  +G   D+ TYN  +
Sbjct: 1002 KAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKGIEADVCTYNVFI 1061

Query: 300  NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
            +  C   +   A L++  +    + PN +TYNTL++     G      ++ + M++   S
Sbjct: 1062 DNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLS 1121

Query: 360  PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
            P   TYN LI G C  G  + A+   + M +   + + VTY T+L  LCK      A +L
Sbjct: 1122 PNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRL 1181

Query: 420  LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            L  +  +      I Y  LIDGL K G +++A+ L G M ++G++PD IT+ +LI GFCR
Sbjct: 1182 LERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCR 1241

Query: 480  ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
               ++ A +++  + + G  +    Y  +I+  C+   V  A++V  +M  + +  D   
Sbjct: 1242 VGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFT 1301

Query: 540  FSTIVKKVADDGMTEEAYKL 559
             + +V  +  DG   EA K 
Sbjct: 1302 CNVLVSSLCRDGKLGEAEKF 1321



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 119/443 (26%), Positives = 215/443 (48%)

Query: 123  ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            +++ +   G +  A +  +++      P  + C  ++  +++  R E    + + M   G
Sbjct: 920  LIRVYLKEGMIDYAVETFELVGLVGFKPSVYTCNMILASMVKDKRTELVWSLFREMSDKG 979

Query: 183  GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              P+  T+N+++ GLC  G ++ A  LL +M  +G  P ++TYNT+L      G++K AI
Sbjct: 980  ICPNVGTFNILINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAI 1039

Query: 243  GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                  + KG    + TY + I+ +C     A+A  +L  M  E  SP+ VTYN+L+N  
Sbjct: 1040 ELIDYMICKGIEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGF 1099

Query: 303  CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
             K+GK   A  V N +    + PN +TYN L+      G ++   ++LD M  A      
Sbjct: 1100 VKEGKIGVAAQVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNE 1159

Query: 363  FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             TY  L+NGLCK+   + A     +M   +     + Y  ++  LCK GML+EA+QL+  
Sbjct: 1160 VTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGN 1219

Query: 423  LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
            +     +P +ITY++LI+G  + G ++ A  +  +M  +G+  + I + TLI+ FC+   
Sbjct: 1220 MYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGN 1279

Query: 483  VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
            V EA+ +   +   G+   +    +++  LC+  K+  A + L  M      P+   +  
Sbjct: 1280 VTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDC 1339

Query: 543  IVKKVADDGMTEEAYKLWQKLIE 565
            I+      G    A+  +  +I+
Sbjct: 1340 IINGYGSIGDPLNAFSFFDDMIK 1362



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 138/520 (26%), Positives = 234/520 (45%), Gaps = 34/520 (6%)

Query: 58   CRGLPGNVCIDRV--NEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVEN 115
            C+G+  +VC   V  + +  +  S+++++L   KK+R   I+                  
Sbjct: 1047 CKGIEADVCTYNVFIDNLCTNHRSAKAYLLL--KKMRKEMISP----------------- 1087

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN---LIRGLIRIDRIEKAS 172
            +E T N ++  F   GK+  A+++ + M++ +  P+   C+    LI G   +   E+A 
Sbjct: 1088 NEVTYNTLINGFVKEGKIGVAAQVFNEMSKFDLSPN---CVTYNALIGGHCHVGDFEEAL 1144

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++L  M  +G   + +TY  ++ GLCK  +   A  LL+ M V+      I Y  ++  +
Sbjct: 1145 RLLDHMEAAGLRLNEVTYGTLLNGLCKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGL 1204

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              NG   +A+    +  + G  P +ITY+ LI   C+   I  A E++  M   G   + 
Sbjct: 1205 CKNGMLDEAVQLVGNMYKDGVNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNK 1264

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            + Y++L+   C+ G   +A+ V   +   G   +  T N L+ SL   G     +K L  
Sbjct: 1265 IIYSTLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCH 1324

Query: 353  MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
            M+     P   TY+ +ING    G    A + F+ M+     P   TY ++L  LCK G 
Sbjct: 1325 MSRIGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGN 1384

Query: 413  LNEA---LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            L EA   L  LH + G+  S   + YNTL+    K G + +A+ L+ +M++N + PD  T
Sbjct: 1385 LVEAKKFLNRLHYIPGAVDS---VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 1441

Query: 470  HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLELM 528
            + +L+ G CR  +   AV L      RG    N   Y  ++ GL K+     A    E M
Sbjct: 1442 YSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEM 1501

Query: 529  ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            +     PD   F+ I+   +  G   +A   +  +  W V
Sbjct: 1502 MKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGV 1541



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 122/460 (26%), Positives = 209/460 (45%), Gaps = 1/460 (0%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            V  D  T + ++  FC  G +  A ++I  M R   + +      LI    +   + +A 
Sbjct: 1225 VNPDVITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAM 1284

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            KV  +M  +G   D  T N++V  LC+ G++  A   L  MS  G  P+ ITY+ I+   
Sbjct: 1285 KVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGY 1344

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               G    A  F+ D ++ G  P   TY  L++ +CK   +  A + L+ +     + D 
Sbjct: 1345 GSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRLHYIPGAVDS 1404

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILD 351
            V YN+L+  +CK G   +AV + + ++   + P+S TY++LL  L  +G    AV     
Sbjct: 1405 VMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLFGT 1464

Query: 352  IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
             M   +  P    Y  L++GL K G    A   F +M+ K   PD V +N ++ +  + G
Sbjct: 1465 AMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSRRG 1524

Query: 412  MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             + +A      +      P L TYN L+ G +KK  + + + LY  MM  GI PD +T  
Sbjct: 1525 QMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH 1584

Query: 472  TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            +LI G  ++   +  V LL ++   G       + ++I+   +S K+  A  ++  M + 
Sbjct: 1585 SLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTL 1644

Query: 532  RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
               PD   ++ I   +       E+  +  +++E  V  K
Sbjct: 1645 GVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPK 1684



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 209/455 (45%), Gaps = 41/455 (9%)

Query: 158  LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
            LI GL     ++KA  +L+ M  +G VP  +TYN ++   CK+G+ ++AI L+D M   G
Sbjct: 990  LINGLCVEGNLKKAGNLLKQMEENGFVPTIVTYNTLLNWYCKKGRYKAAIELIDYMICKG 1049

Query: 218  CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             E DV TYN  +  +  N +  +A    K   ++   P  +TY  LI    K+  I  A 
Sbjct: 1050 IEADVCTYNVFIDNLCTNHRSAKAYLLLKKMRKEMISPNEVTYNTLINGFVKEGKIGVAA 1109

Query: 278  EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +V ++M+    SP+ VTYN+L+   C  G +++A+ +++++ + G+  N +TY TLL+ L
Sbjct: 1110 QVFNEMSKFDLSPNCVTYNALIGGHCHVGDFEEALRLLDHMEAAGLRLNEVTYGTLLNGL 1169

Query: 338  GSRGCWDAVDKILD-------------------------IMNEASH----------SPTV 362
                 ++   ++L+                         +++EA            +P V
Sbjct: 1170 CKHEKFELAKRLLERMRVNDMVVGHIAYTVLIDGLCKNGMLDEAVQLVGNMYKDGVNPDV 1229

Query: 363  FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             TY+ LING C+ G +  A     +M       + + Y+T++   C+ G + EA+++  +
Sbjct: 1230 ITYSSLINGFCRVGNIKSAKEIICRMYRSGLVLNKIIYSTLIYNFCQHGNVTEAMKVYAV 1289

Query: 423  LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
            +N +       T N L+  L + G + +A      M   G+ P+ IT+  +I G+     
Sbjct: 1290 MNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSRIGLVPNSITYDCIINGYGSIGD 1349

Query: 483  VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP---DDTV 539
               A     ++ K G       Y  ++ GLCK   +  A + L  +    Y P   D  +
Sbjct: 1350 PLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVEAKKFLNRL---HYIPGAVDSVM 1406

Query: 540  FSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            ++T++ +    G   EA  L+ K+++  V     T
Sbjct: 1407 YNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYT 1441



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 115/451 (25%), Positives = 198/451 (43%), Gaps = 1/451 (0%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D    N +L   C  G L +A  L D M + N +PD +   +L+ GL R  +   A  + 
Sbjct: 1403 DSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLTGLCRKGKAVTAVCLF 1462

Query: 176  QIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
               +  G + P+ + Y  +V GL K G  ++A    +EM   G  PD + +N I+ +   
Sbjct: 1463 GTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTCPDTVAFNAIIDSCSR 1522

Query: 235  NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             G+  +A  F+      G  P L TY IL+    K+  + R + +   M  EG  PD +T
Sbjct: 1523 RGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLT 1582

Query: 295  YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
            ++SL+    K G  D  V ++  ++  G   +  T+N L++     G       +++ MN
Sbjct: 1583 FHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMN 1642

Query: 355  EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                 P   TYN + NGL K      +    ++M+     P    Y T++  +C+ G + 
Sbjct: 1643 TLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQ 1702

Query: 415  EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
             A +L   +         +  + ++ GL   G  E AM++   M+   + P   T  TL+
Sbjct: 1703 GAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHMLRMRLLPTIATFTTLM 1762

Query: 475  WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
              FCR  ++ EA+ L   +   G K+   AY ++I G+C +     A ++ E M      
Sbjct: 1763 HRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAAAFELYEEMRHRDLC 1822

Query: 535  PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            P+ T ++ +V  ++      +  KL   L E
Sbjct: 1823 PNITTYAVLVDAISAANNLIQGEKLLTDLQE 1853



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 112/491 (22%), Positives = 211/491 (42%), Gaps = 36/491 (7%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            + ++ NFC  G +T+A K+  +M       D   C  L+  L R  ++ +A K L  M  
Sbjct: 1268 STLIYNFCQHGNVTEAMKVYAVMNCNGHGADHFTCNVLVSSLCRDGKLGEAEKFLCHMSR 1327

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
             G VP++ITY+ ++ G    G   +A +  D+M   G  P   TY ++L+ +   G   +
Sbjct: 1328 IGLVPNSITYDCIINGYGSIGDPLNAFSFFDDMIKCGQHPSFFTYGSLLKGLCKGGNLVE 1387

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A  F             + Y  L+ + CK   +  A+ + D M      PD  TY+SL+ 
Sbjct: 1388 AKKFLNRLHYIPGAVDSVMYNTLLAETCKSGNLHEAVALFDKMVQNNVLPDSYTYSSLLT 1447

Query: 301  FSCKQGKYDDAVLVINNLLSRGME------------------------------------ 324
              C++GK   AV +    + RG                                      
Sbjct: 1448 GLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYFFEEMMKKGTC 1507

Query: 325  PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            P+++ +N ++ S   RG     +     M      P + TYNIL++G  K   + R ++ 
Sbjct: 1508 PDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSKKQALLRYLSL 1567

Query: 385  FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            ++ M+ +   PD +T+++++  L K G+ +  ++LL  +          T+N LI+  ++
Sbjct: 1568 YSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFTFNILINKYSE 1627

Query: 445  KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
             G M KA  L   M   G+ PD  T+  +  G  +     E+  +L E+ + G   +++ 
Sbjct: 1628 SGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEMLENGVIPKHAQ 1687

Query: 505  YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            Y  +I+G+C+   +  A ++ + M +  +   +   S +V+ +   G TE+A  +   ++
Sbjct: 1688 YITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTEDAMLVLDHML 1747

Query: 565  EWKVFEKGTTL 575
              ++     T 
Sbjct: 1748 RMRLLPTIATF 1758



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 97/418 (23%), Positives = 171/418 (40%), Gaps = 36/418 (8%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDI-MARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
            D  T + +L   C +GK   A  L    M R    P+      L+ GL +    + A   
Sbjct: 1438 DSYTYSSLLTGLCRKGKAVTAVCLFGTAMGRGTLFPNHVMYTCLVDGLSKAGHPKAAFYF 1497

Query: 175  LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR---- 230
             + M+  G  PDT+ +N ++    +RGQ+  A      M   G  P++ TYN +L     
Sbjct: 1498 FEEMMKKGTCPDTVAFNAIIDSCSRRGQMMKANDFFSTMRWWGVCPNLATYNILLHGFSK 1557

Query: 231  ------------TMFDNGKFKQAIGFWKDQL---RKGCPPYLI----------------T 259
                        TM   G F   + F    L   + G P   +                T
Sbjct: 1558 KQALLRYLSLYSTMMREGIFPDKLTFHSLILGLSKSGIPDLGVKLLGKMIMEGTLADQFT 1617

Query: 260  YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
            + ILI +  +   + +A ++++ M   G  PD  TYN + N   K+  + ++ +V++ +L
Sbjct: 1618 FNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKKSAFRESTVVLHEML 1677

Query: 320  SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
              G+ P    Y TL++ +   G      K+ D M            + ++ GL   G  +
Sbjct: 1678 ENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAESAMVRGLLHCGKTE 1737

Query: 380  RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
             A+   + M+     P I T+ T++   C++  + EAL+L  ++        ++ YN LI
Sbjct: 1738 DAMLVLDHMLRMRLLPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLI 1797

Query: 440  DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
             G+   G    A  LY +M    + P+  T+  L+     A+ + +   LL ++ +RG
Sbjct: 1798 MGMCANGDSAAAFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERG 1855



 Score = 99.8 bits (247), Expect = 4e-18,   Method: Compositional matrix adjust.
 Identities = 81/348 (23%), Positives = 141/348 (40%), Gaps = 41/348 (11%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCINLIRGLIRIDRIEKASKVL 175
            T N +L  F  +  L     L   M R    PD   FH   +LI GL +    +   K+L
Sbjct: 1547 TYNILLHGFSKKQALLRYLSLYSTMMREGIFPDKLTFH---SLILGLSKSGIPDLGVKLL 1603

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
              M+M G + D  T+N+++    + G++R A  L++ M+  G  PD  TYN I   +   
Sbjct: 1604 GKMIMEGTLADQFTFNILINKYSESGKMRKAFDLVNFMNTLGVFPDRDTYNHIFNGLNKK 1663

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
              F+++     + L  G  P    Y  LI  +C+   I  A ++ D+M   G     V  
Sbjct: 1664 SAFRESTVVLHEMLENGVIPKHAQYITLINGMCRVGDIQGAFKLKDEMEALGFGSHEVAE 1723

Query: 296  NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +++V      GK +DA+LV++++L   +                                
Sbjct: 1724 SAMVRGLLHCGKTEDAMLVLDHMLRMRL-------------------------------- 1751

Query: 356  ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                PT+ T+  L++  C+   +  A+     M     + D+V YN ++  +C  G    
Sbjct: 1752 ---LPTIATFTTLMHRFCRDAKIAEALKLKGVMELCGLKLDVVAYNVLIMGMCANGDSAA 1808

Query: 416  ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
            A +L   +      P + TY  L+D ++    + +   L   + E G+
Sbjct: 1809 AFELYEEMRHRDLCPNITTYAVLVDAISAANNLIQGEKLLTDLQERGL 1856


>gi|302759663|ref|XP_002963254.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
 gi|300168522|gb|EFJ35125.1| hypothetical protein SELMODRAFT_79771 [Selaginella moellendorffii]
          Length = 495

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 123/423 (29%), Positives = 206/423 (48%), Gaps = 9/423 (2%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSV 215
           ++I  L  I   + AS+V +          T+ TYN  +  L K G    A  + D+M  
Sbjct: 6   DVIHVLENIKSPKLASRVFKWAARQEDFEHTVFTYNAYLNALVKGGHGSKARKIFDDMLY 65

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
             C P++ TY  +LR + D+ K   A+   +D   K   P      +L+  +CK   +  
Sbjct: 66  KECLPNIYTYGIVLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDA 125

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A E+   ++ E CS D ++YN L    CK  + D A+ V   +    + P+ +TYN LL+
Sbjct: 126 AYELYKRLSDE-CSLDRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLY 184

Query: 336 SLGSRGCWDAVDKILDIMNEASHS----PTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
                G  +    +L+ M E        P +++YN +I+G CK   +  A     +M+  
Sbjct: 185 GYCRAGRMEQAMTLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKS 244

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
            C P++VT+NT+L  LC  G L+EA  +   +   +C P  +TY  LI G A+   ++KA
Sbjct: 245 GCSPNVVTFNTLLDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALRIDKA 304

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
              +  M+  G+ P+  T+  LI G C A++VE+A+++LK +   G +     Y  VI  
Sbjct: 305 NDYFVDMLRRGVEPNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGA 364

Query: 512 LCKSKKVDMAIQVLELMISSRY---KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           LCK  +++ A ++    + SR    KPD   +STI+  +       EAY+ + +++E K+
Sbjct: 365 LCKGGQIERATKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKL 424

Query: 569 FEK 571
             K
Sbjct: 425 VAK 427



 Score =  172 bits (437), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 109/402 (27%), Positives = 196/402 (48%), Gaps = 10/402 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  L      G  + A K+ D M  +  +P+ +    ++RGL    + + A ++LQ M
Sbjct: 39  TYNAYLNALVKGGHGSKARKIFDDMLYKECLPNIYTYGIVLRGLCDDAKTDAALELLQDM 98

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P T   NM+V  LCK G++ +A  L   +S   C  D I+YN +   +    + 
Sbjct: 99  ESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLS-DECSLDRISYNMLTYGLCKADQI 157

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-----CSPDIV 293
            +A+  + +       P L+TY  L+   C+   + +A+ +L++M IEG       PD+ 
Sbjct: 158 DRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAMTLLEEM-IEGKKGSDVVPDMY 216

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN++++  CK  +   A  V+  ++  G  PN +T+NTLL  L   G  D  + + + M
Sbjct: 217 SYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTLLDGLCLTGKLDEANAMFEYM 276

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E +  PT  TY +LI G  +   +D+A + F  M+ +  +P++ TY  ++G LC    +
Sbjct: 277 VERNCEPTAVTYTVLITGHARALRIDKANDYFVDMLRRGVEPNVYTYTALIGGLCDANKV 336

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS---PDDITH 470
            +AL++L  ++ +   P ++TY  +I  L K G +E+A  L+   M +  +   PD   +
Sbjct: 337 EDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERATKLFNDAMGSRTAKCKPDSYAY 396

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            T+I+  CR  +  EA +    + +     +   Y+ +  GL
Sbjct: 397 STIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAMADGL 438



 Score =  157 bits (397), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 109/389 (28%), Positives = 190/389 (48%), Gaps = 12/389 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L+  C   K   A +L+  M  +   P       L+  L +  +++ A ++ + +    
Sbjct: 78  VLRGLCDDAKTDAALELLQDMESKMLTPTTFIVNMLVSCLCKNGKVDAAYELYKRLSDEC 137

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            + D I+YNM+  GLCK  QI  A+A+  EM  +   P ++TYN +L      G+ +QA+
Sbjct: 138 SL-DRISYNMLTYGLCKADQIDRALAVFGEMEENAVVPSLLTYNGLLYGYCRAGRMEQAM 196

Query: 243 GFWKDQL--RKGCP--PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
              ++ +  +KG    P + +Y  +I   CK   +  A  VL  M   GCSP++VT+N+L
Sbjct: 197 TLLEEMIEGKKGSDVVPDMYSYNTVISGFCKARQLPTARYVLRRMIKSGCSPNVVTFNTL 256

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL--HSLGSRGCWDAVDKILDIMNEA 356
           ++  C  GK D+A  +   ++ R  EP ++TY  L+  H+   R    A D  +D++   
Sbjct: 257 LDGLCLTGKLDEANAMFEYMVERNCEPTAVTYTVLITGHARALR-IDKANDYFVDMLRRG 315

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P V+TY  LI GLC    V+ A+    +M S   +P++VTY  V+GALCK G +  A
Sbjct: 316 VE-PNVYTYTALIGGLCDANKVEDALEILKRMSSTGREPNVVTYTRVIGALCKGGQIERA 374

Query: 417 LQLLHLLNGS---SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +L +   GS    C P    Y+T+I  L ++    +A   + +M+E+ +      ++ +
Sbjct: 375 TKLFNDAMGSRTAKCKPDSYAYSTIIYWLCRQSKFLEAYEYFLRMVESKLVAKPHIYKAM 434

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
             G     + E+   +  E    G +++ 
Sbjct: 435 ADGLELVQETEKVERVCLEASAHGIELQQ 463


>gi|242076206|ref|XP_002448039.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
 gi|241939222|gb|EES12367.1| hypothetical protein SORBIDRAFT_06g020090 [Sorghum bicolor]
          Length = 481

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/361 (32%), Positives = 189/361 (52%), Gaps = 14/361 (3%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
           T T+N+M+  LC  G+   A+ LL +M      P+ +TYNT++      G+ + A+   +
Sbjct: 116 TTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIAGFCARGRVQAALEVMR 171

Query: 247 D-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCK 304
           + + R G  P   TY  LI   CK   +  A +V D+M  +G  +P  V YN+L+   C 
Sbjct: 172 EMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCD 231

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           +GK D A+    +++ RG+     TYN L+H+L   G       +L+ M     SP VFT
Sbjct: 232 RGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFT 291

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YNILING CK G   +A+  F +M  K  +   VTY +++ A  ++G + E  +L  +  
Sbjct: 292 YNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAV 351

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P ++ YN LI+     G ME+A  +  +M +  I PDD+T+ TLI GFC   +++
Sbjct: 352 KKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLD 411

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA  L+ E+ KRG +           GLCK+ + D A  +++ M+     PDD+ + +++
Sbjct: 412 EARGLIDEMTKRGIQPD--------LGLCKNGQGDDAENLMKEMVGKGITPDDSTYISLI 463

Query: 545 K 545
           +
Sbjct: 464 E 464



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 116/375 (30%), Positives = 184/375 (49%), Gaps = 14/375 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L++ C+ GK   A +L+  M R N +        +I G     R++ A +V++ M
Sbjct: 118 TFNIMLRHLCATGKPVRALELLRQMPRPNAVT----YNTVIAGFCARGRVQAALEVMREM 173

Query: 179 VMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTILRTMFDNG 236
              GG+ PD  TY  ++ G CK G++  A  + DEM   G   P  + YN ++    D G
Sbjct: 174 RERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDRG 233

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           K   A+ + +D +++G    + TY +L+  +      + A  VL++M   G SPD+ TYN
Sbjct: 234 KLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTYN 293

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L+N  CK+G    A+ V   +  +G+   ++TY +L+++   +G     D++  +  + 
Sbjct: 294 ILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVKK 353

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P V  YN LIN  C  G ++RA     +M  K   PD VTYNT++   C  G L+EA
Sbjct: 354 GIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDEA 413

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             L+  +      P L        GL K G  + A  L  +M+  GI+PDD T+ +LI G
Sbjct: 414 RGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIEG 465

Query: 477 FCRADQVEEAVDLLK 491
               D+   A D  K
Sbjct: 466 LTTVDEQMSAADAAK 480



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 107/362 (29%), Positives = 179/362 (49%), Gaps = 22/362 (6%)

Query: 83  HVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDI 142
           H+ A  K +R L + ++   P            +  T N ++  FC+RG++  A +++  
Sbjct: 125 HLCATGKPVRALELLRQMPRP------------NAVTYNTVIAGFCARGRVQAALEVMRE 172

Query: 143 MARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKR 200
           M  R  I PD +    LI G  +I R+E A+KV   M+  G V P  + YN ++GG C R
Sbjct: 173 MRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEVAPSAVMYNALIGGYCDR 232

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G++  A+   ++M   G    V TYN ++  +F +G+   A    ++  R G  P + TY
Sbjct: 233 GKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYAVLEEMQRNGLSPDVFTY 292

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            ILI   CK+    +A+EV ++M+ +G     VTY SL+    ++G+  +   +    + 
Sbjct: 293 NILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFSRKGQVQETDRLFKVAVK 352

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +G+ P+ + YN L++S  + G  +   +I+  M +    P   TYN LI G C  G +D 
Sbjct: 353 KGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDVTYNTLIRGFCLLGRLDE 412

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A    ++M  +  QPD+         LCK G  ++A  L+  + G   +P   TY +LI+
Sbjct: 413 ARGLIDEMTKRGIQPDL--------GLCKNGQGDDAENLMKEMVGKGITPDDSTYISLIE 464

Query: 441 GL 442
           GL
Sbjct: 465 GL 466



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 91/327 (27%), Positives = 161/327 (49%), Gaps = 6/327 (1%)

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + D  R   P    T+ I++  +C      RA+E+L  M      P+ VTYN+++ 
Sbjct: 100 AFALFADIYRLRLPLCTTTFNIMLRHLCATGKPVRALELLRQMP----RPNAVTYNTVIA 155

Query: 301 FSCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILD-IMNEASH 358
             C +G+   A+ V+  +  RG + P+  TY TL+      G  +   K+ D ++ +   
Sbjct: 156 GFCARGRVQAALEVMREMRERGGIAPDKYTYATLISGWCKIGRMEDAAKVFDEMLTQGEV 215

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P+   YN LI G C  G +D A+     MV +     + TYN ++ AL  +G  ++A  
Sbjct: 216 APSAVMYNALIGGYCDRGKLDVALQYREDMVQRGVAMTVATYNLLVHALFMDGRASDAYA 275

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  +  +  SP + TYN LI+G  K+G  +KA+ ++ +M   G+    +T+ +LI+ F 
Sbjct: 276 VLEEMQRNGLSPDVFTYNILINGYCKEGNEKKALEVFEEMSRKGVRATAVTYTSLIYAFS 335

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R  QV+E   L K   K+G +     Y  +I+  C    ++ A +++  M   R  PDD 
Sbjct: 336 RKGQVQETDRLFKVAVKKGIRPDVVMYNALINSHCAGGDMERAFEIMAEMEKKRIPPDDV 395

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++T+++     G  +EA  L  ++ +
Sbjct: 396 TYNTLIRGFCLLGRLDEARGLIDEMTK 422


>gi|414875533|tpg|DAA52664.1| TPA: hypothetical protein ZEAMMB73_493958 [Zea mays]
          Length = 688

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 129/433 (29%), Positives = 214/433 (49%), Gaps = 7/433 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T N ++     +G L +A++L++ M    +   F +   LI GL+    ++K   + 
Sbjct: 240 NDVTYNVVITGLTRKGDLEEAAELVEGMRLSKKASSFTYN-PLITGLLARGCVKKVYDLQ 298

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G +P  +TYN M+ GL + G + +A     EM   G  PDVITYN++L      
Sbjct: 299 LEMENEGIMPTVVTYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKA 358

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  K+A+  + D  R G  P ++TY I I+  C+   +  A  + ++M  +GC P++ TY
Sbjct: 359 GNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTY 418

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS---LGSRGCWDAVDKILDI 352
             L+  S        A    + +LS+G++P+   YNT + +   LG       + ++L  
Sbjct: 419 TILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVL-- 476

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E   S TV TYNILI+GLCK G +  A     +MVS   QPD +TY  ++ A C+ G+
Sbjct: 477 MLEGISSDTV-TYNILIHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGL 535

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L EA ++ + +      P  +T+  +I    ++G +  A   + +M+E G+ P++IT+  
Sbjct: 536 LREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNV 595

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI   CR  + + A     E+ +RG       Y L+I G CK    + A++    M  + 
Sbjct: 596 LIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNG 655

Query: 533 YKPDDTVFSTIVK 545
             PD      +VK
Sbjct: 656 IHPDYLTHKALVK 668



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 109/359 (30%), Positives = 173/359 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++      G +  A      M     +PD     +L+ G  +   +++A  +   +
Sbjct: 312 TYNAMIHGLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDL 371

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  P  +TYN+ + G C+ G +  A  L +EM   GC P+V TY  +++   +    
Sbjct: 372 RRAGLAPTVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSL 431

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F+ + L KG  P    Y   I        IARA+E+ + + +EG S D VTYN L
Sbjct: 432 AMAREFFDEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNIL 491

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G   DA  +   ++S G++P+ ITY  L+H+   RG      KI + M     
Sbjct: 492 IHGLCKTGNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGL 551

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P+  T+ ++I+  C+ G +  A   F +M+ +  +P+ +TYN ++ ALC+ G    A  
Sbjct: 552 LPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASH 611

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
             H +          TY  LIDG  K G  E AM  Y +M +NGI PD +TH+ L+ GF
Sbjct: 612 HFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMHQNGIHPDYLTHKALVKGF 670



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/462 (27%), Positives = 217/462 (46%), Gaps = 17/462 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI------PDFHFCINLIRGLIRID 166
           V  D K  N +L+       L DA++  DI A   ++      P       L+   ++  
Sbjct: 165 VAPDVKDCNHVLR------ALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDSFLKEG 218

Query: 167 RIEKASKVLQIMVM--SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           R +K + +L+ M    SG +P+ +TYN+++ GL ++G +  A  L++ M +S  +    T
Sbjct: 219 RKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-KASSFT 277

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV-LDDM 283
           YN ++  +   G  K+      +   +G  P ++TY  +I  +  Q G+  A +V   +M
Sbjct: 278 YNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIHGLL-QSGLVEAAQVKFAEM 336

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G  PD++TYNSL+N  CK G   +A+L+  +L   G+ P  +TYN  +      G  
Sbjct: 337 RAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRIDGYCRLGDL 396

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           +    + + M E    P V TY IL+ G      +  A   F++M+SK  QPD   YNT 
Sbjct: 397 EEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQPDCFAYNTR 456

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           + A    G +  AL+L  +L     S   +TYN LI GL K G ++ A  L  +M+ NG+
Sbjct: 457 ICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGL 516

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD IT+  LI   C    + EA  +   +   G       + ++IH  C+   +  A  
Sbjct: 517 QPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYG 576

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               M+    +P++  ++ ++  +   G T+ A   + +++E
Sbjct: 577 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLE 618



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/410 (27%), Positives = 194/410 (47%), Gaps = 46/410 (11%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           ++   EM+  G  PDV   N +LR + D  ++       ++ L+ G  P ++TY  L++ 
Sbjct: 154 LSAFREMASHGVAPDVKDCNHVLRALRDAARWDDICAVHEEMLQLGIEPSIVTYNTLLDS 213

Query: 267 VCKQCGIARAIEVLDDMAIE--GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL-LSRGM 323
             K+    +   +L +M     GC P+ VTYN ++    ++G  ++A  ++  + LS+  
Sbjct: 214 FLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEEAAELVEGMRLSK-- 271

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDR 380
           + +S TYN L+  L +RGC   V K+ D+  E  +    PTV TYN +I+GL + GLV+ 
Sbjct: 272 KASSFTYNPLITGLLARGC---VKKVYDLQLEMENEGIMPTVVTYNAMIHGLLQSGLVEA 328

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A   F +M +    PD++TYN++L   CK G L EAL L   L  +  +P ++TYN  ID
Sbjct: 329 AQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAPTVLTYNIRID 388

Query: 441 GLAKKGCMEKAMVL-----------------------------------YGQMMENGISP 465
           G  + G +E+A +L                                   + +M+  G+ P
Sbjct: 389 GYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFFDEMLSKGLQP 448

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D   + T I        +  A++L + +   G       Y ++IHGLCK+  +  A ++ 
Sbjct: 449 DCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKTGNLKDAKELQ 508

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             M+S+  +PD   ++ ++    + G+  EA K++  +I   +     T 
Sbjct: 509 MKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTF 558



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 109/453 (24%), Positives = 205/453 (45%), Gaps = 3/453 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ--IPDFHFCINLIRGLIRIDRIEK 170
           +E    T N +L +F   G+    + L+  M  R    +P+      +I GL R   +E+
Sbjct: 200 IEPSIVTYNTLLDSFLKEGRKDKVAMLLKEMETRGSGCLPNDVTYNVVITGLTRKGDLEE 259

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A+++++ M +S     + TYN ++ GL  RG ++    L  EM   G  P V+TYN ++ 
Sbjct: 260 AAELVEGMRLSKKA-SSFTYNPLITGLLARGCVKKVYDLQLEMENEGIMPTVVTYNAMIH 318

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +  +G  + A   + +    G  P +ITY  L+   CK   +  A+ +  D+   G +P
Sbjct: 319 GLLQSGLVEAAQVKFAEMRAMGLLPDVITYNSLLNGYCKAGNLKEALLLFGDLRRAGLAP 378

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            ++TYN  ++  C+ G  ++A ++   +  +G  PN  TY  L+    +        +  
Sbjct: 379 TVLTYNIRIDGYCRLGDLEEARILKEEMGEQGCLPNVCTYTILMKGSLNVCSLAMAREFF 438

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           D M      P  F YN  I      G + RA+     ++ +    D VTYN ++  LCK 
Sbjct: 439 DEMLSKGLQPDCFAYNTRICAELILGDIARALELREVLMLEGISSDTVTYNILIHGLCKT 498

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G L +A +L   +  +   P  ITY  LI    ++G + +A  ++  M+ +G+ P  +T 
Sbjct: 499 GNLKDAKELQMKMVSNGLQPDCITYTCLIHAHCERGLLREARKIFNNMISDGLLPSAVTF 558

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             +I  +CR   +  A    +++ + G +     Y ++IH LC+  +  +A      M+ 
Sbjct: 559 TVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEITYNVLIHALCRMGRTQLASHHFHEMLE 618

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                +   ++ ++      G  E+A + + ++
Sbjct: 619 RGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEM 651



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 56/195 (28%), Positives = 90/195 (46%), Gaps = 16/195 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI--------RGLIR 164
           + +D  T N ++   C  G L DA +L   M      PD   CI           RGL+R
Sbjct: 481 ISSDTVTYNILIHGLCKTGNLKDAKELQMKMVSNGLQPD---CITYTCLIHAHCERGLLR 537

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
                +A K+   M+  G +P  +T+ +++   C+RG + SA     +M   G EP+ IT
Sbjct: 538 -----EARKIFNNMISDGLLPSAVTFTVIIHAYCRRGNLYSAYGWFRKMLEEGVEPNEIT 592

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN ++  +   G+ + A   + + L +G      TYT+LI+  CK      A+    +M 
Sbjct: 593 YNVLIHALCRMGRTQLASHHFHEMLERGLVANKYTYTLLIDGNCKVGNWEDAMRFYFEMH 652

Query: 285 IEGCSPDIVTYNSLV 299
             G  PD +T+ +LV
Sbjct: 653 QNGIHPDYLTHKALV 667


>gi|224069250|ref|XP_002302937.1| predicted protein [Populus trichocarpa]
 gi|222844663|gb|EEE82210.1| predicted protein [Populus trichocarpa]
          Length = 564

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 116/384 (30%), Positives = 192/384 (50%), Gaps = 2/384 (0%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFW 245
           D  ++ +M+ G C+ G +  +  LL  +   G  P+V+ Y T++     NG  ++A  F+
Sbjct: 161 DVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFF 220

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
                 G      T+T+LI  + K+       ++ + M I G  P++ TYN L+N  C +
Sbjct: 221 DKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGE 280

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFT 364
           GK   A  + + +  RG+E N +TYNTL+  +      W+A +K++D M +A+ SP + T
Sbjct: 281 GKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEA-EKLVDQMKKAAVSPNLIT 339

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN LI G C  G +D+A +  +Q+ S    P +VTYN ++    K G       L   + 
Sbjct: 340 YNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREME 399

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
           G   SP  +T   LID   +   MEKA  +Y  M + G+ PD   +  LI G C    ++
Sbjct: 400 GRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMK 459

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           E+  L + +G+   +  +  Y  +IHG CK      A+++L  M +    P+   +S+I+
Sbjct: 460 ESSKLFRSMGEMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSII 519

Query: 545 KKVADDGMTEEAYKLWQKLIEWKV 568
             +  DG  EEA  L  K+IE ++
Sbjct: 520 GVLCKDGKWEEAEVLLDKMIELQL 543



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 114/425 (26%), Positives = 200/425 (47%), Gaps = 1/425 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L +         A    + +  R +   + F I +I+G      ++K+ ++L ++  
Sbjct: 132 NSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGI-MIKGCCENGNLDKSFQLLGLLQD 190

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ + Y  ++ G CK G I  A    D+M   G   +  T+  ++  +F  G  K 
Sbjct: 191 MGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKD 250

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               ++     G  P L TY  L+ + C +  I RA ++ D+M   G   ++VTYN+L+ 
Sbjct: 251 GFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIG 310

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C++ +  +A  +++ +    + PN ITYNTL+      G  D    +LD +     SP
Sbjct: 311 GMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSP 370

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           ++ TYNILI G  K G      +   +M  +   P  VT   ++ A  +   + +A Q+ 
Sbjct: 371 SLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIY 430

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P +  Y  LI GL  KG M+++  L+  M E  + P D+ + T+I G+C+ 
Sbjct: 431 SSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSDVIYNTMIHGYCKE 490

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           D    A+ LL+E+  +G     ++Y  +I  LCK  K + A  +L+ MI  + KP  ++ 
Sbjct: 491 DNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDKMIELQLKPSASIL 550

Query: 541 STIVK 545
           + I K
Sbjct: 551 NMISK 555



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/382 (26%), Positives = 195/382 (51%), Gaps = 1/382 (0%)

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            + Y  ++    K   +  A+   +EM   G       +N++L ++  +  F++A  F+ 
Sbjct: 93  ALLYESIINAHLKSQLLDKALIFFNEMVDKGLVFRPNIFNSLLGSLVRSNCFEKAWLFF- 151

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           ++L++     + ++ I+I+  C+   + ++ ++L  +   G SP++V Y +L++  CK G
Sbjct: 152 NELKERVKFDVYSFGIMIKGCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNG 211

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             + A L  + +   G+  N  T+  L++ L  +G       + + M      P ++TYN
Sbjct: 212 DIERARLFFDKMGEMGLVANQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYN 271

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L+N  C  G + RA + F++M  +  + ++VTYNT++G +C+E  + EA +L+  +  +
Sbjct: 272 CLMNEYCGEGKICRAFDLFDEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKA 331

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           + SP LITYNTLI G    G ++KA  L  Q+  NG+SP  +T+  LI G+ +A   +  
Sbjct: 332 AVSPNLITYNTLIGGFCDVGNLDKASSLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGV 391

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            DL +E+  RG         ++I    + ++++ A Q+   M      PD  V+  ++  
Sbjct: 392 ADLAREMEGRGISPSKVTCTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHG 451

Query: 547 VADDGMTEEAYKLWQKLIEWKV 568
           +   G  +E+ KL++ + E  V
Sbjct: 452 LCMKGNMKESSKLFRSMGEMHV 473



 Score =  127 bits (319), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 83/306 (27%), Positives = 144/306 (47%), Gaps = 2/306 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           ++ T   ++     +G   D   L + M      P+ +    L+       +I +A  + 
Sbjct: 231 NQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLF 290

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G   + +TYN ++GG+C+  ++  A  L+D+M  +   P++ITYNT++    D 
Sbjct: 291 DEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDV 350

Query: 236 GKFKQAIGFWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           G   +A     DQL+  G  P L+TY ILIE   K        ++  +M   G SP  VT
Sbjct: 351 GNLDKASSLL-DQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVT 409

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
              L++   +  + + A  + +++   G+ P+   Y  L+H L  +G      K+   M 
Sbjct: 410 CTVLIDAYVRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMG 469

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E    P+   YN +I+G CK     RA+    +M +K   P++ +Y++++G LCK+G   
Sbjct: 470 EMHVEPSDVIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWE 529

Query: 415 EALQLL 420
           EA  LL
Sbjct: 530 EAEVLL 535



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 119/256 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +  T N ++   C   ++ +A KL+D M +    P+      LI G   +  ++KAS
Sbjct: 298 VEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDVGNLDKAS 357

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  +  +G  P  +TYN+++ G  K G  +    L  EM   G  P  +T   ++   
Sbjct: 358 SLLDQLKSNGLSPSLVTYNILIEGYSKAGNWKGVADLAREMEGRGISPSKVTCTVLIDAY 417

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               + ++A   +    + G  P +  Y +LI  +C +  +  + ++   M      P  
Sbjct: 418 VRLQEMEKAFQIYSSMEKFGLVPDVYVYGVLIHGLCMKGNMKESSKLFRSMGEMHVEPSD 477

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V YN++++  CK+     A+ ++  + ++G+ PN  +Y++++  L   G W+  + +LD 
Sbjct: 478 VIYNTMIHGYCKEDNSYRALRLLREMEAKGLVPNVASYSSIIGVLCKDGKWEEAEVLLDK 537

Query: 353 MNEASHSPTVFTYNIL 368
           M E    P+    N++
Sbjct: 538 MIELQLKPSASILNMI 553



 Score = 82.0 bits (201), Expect = 9e-13,   Method: Compositional matrix adjust.
 Identities = 85/373 (22%), Positives = 152/373 (40%), Gaps = 88/373 (23%)

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           ILI+++ K   + +A+ + +    +G      + + L+       K   A  +I  +LS 
Sbjct: 8   ILIQKMVKIPPL-QALSLFNSSIQQGFQHTHHSISFLLQHLLDHHKLPHAQSLILQILSN 66

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
            +     T  +LLH L                N+     T   Y  +IN   K  L+D+A
Sbjct: 67  KISSPFFTVPSLLHHL--------------TQNQNPSMTTALLYESIINAHLKSQLLDKA 112

Query: 382 INSFNQMVSKNC--QPDIVTYNTVLGAL-------------------------------- 407
           +  FN+MV K    +P+I  +N++LG+L                                
Sbjct: 113 LIFFNEMVDKGLVFRPNI--FNSLLGSLVRSNCFEKAWLFFNELKERVKFDVYSFGIMIK 170

Query: 408 --CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME----- 460
             C+ G L+++ QLL LL     SP ++ Y TLIDG  K G +E+A + + +M E     
Sbjct: 171 GCCENGNLDKSFQLLGLLQDMGLSPNVVIYTTLIDGCCKNGDIERARLFFDKMGEMGLVA 230

Query: 461 ------------------------------NGISPDDITHRTLIWGFCRADQVEEAVDLL 490
                                         NG+ P+  T+  L+  +C   ++  A DL 
Sbjct: 231 NQYTFTVLINGLFKKGLKKDGFDLFEKMKINGLFPNLYTYNCLMNEYCGEGKICRAFDLF 290

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+ +RG +     Y  +I G+C+ ++V  A ++++ M  +   P+   ++T++    D 
Sbjct: 291 DEMRERGVEANVVTYNTLIGGMCREERVWEAEKLVDQMKKAAVSPNLITYNTLIGGFCDV 350

Query: 551 GMTEEAYKLWQKL 563
           G  ++A  L  +L
Sbjct: 351 GNLDKASSLLDQL 363


>gi|15239874|ref|NP_196771.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75171712|sp|Q9FMQ1.1|PP376_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At5g12100, mitochondrial; Flags: Precursor
 gi|9759377|dbj|BAB10028.1| unnamed protein product [Arabidopsis thaliana]
 gi|28973713|gb|AAO64173.1| unknown protein [Arabidopsis thaliana]
 gi|29824237|gb|AAP04079.1| unknown protein [Arabidopsis thaliana]
 gi|110737169|dbj|BAF00534.1| hypothetical protein [Arabidopsis thaliana]
 gi|332004380|gb|AED91763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 816

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 127/432 (29%), Positives = 206/432 (47%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C   ++ DA +L D M  R  +P       LI G  +    EK+ KV + M  
Sbjct: 218 NVLIDGLCKGKRMNDAEQLFDEMLARRLLPSLITYNTLIDGYCKAGNPEKSFKVRERMKA 277

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P  IT+N ++ GL K G +  A  +L EM   G  PD  T++ +      N K + 
Sbjct: 278 DHIEPSLITFNTLLKGLFKAGMVEDAENVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEA 337

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+G ++  +  G      T +IL+  +CK+  I +A E+L     +G  P+ V YN++++
Sbjct: 338 ALGVYETAVDSGVKMNAYTCSILLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMID 397

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C++G    A + I  +  +GM+P+ + YN L+      G  +  +K ++ M     SP
Sbjct: 398 GYCRKGDLVGARMKIEAMEKQGMKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSP 457

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +V TYNILI G  +    D+  +   +M      P++V+Y T++  LCK   L EA  + 
Sbjct: 458 SVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 517

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +     SP +  YN LIDG   KG +E A     +M++ GI  + +T+ TLI G    
Sbjct: 518 RDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMT 577

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++ EA DLL EI ++G K     Y  +I G   +  V   I + E M  S  KP    +
Sbjct: 578 GKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTY 637

Query: 541 STIVKKVADDGM 552
             ++     +G+
Sbjct: 638 HLLISLCTKEGI 649



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/395 (28%), Positives = 187/395 (47%), Gaps = 6/395 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L   C  GK+  A +++     +  +P+      +I G  R   +  A   ++ M   G
Sbjct: 360 LLNALCKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQG 419

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD + YN ++   C+ G++ +A   +++M + G  P V TYN ++       +F +  
Sbjct: 420 MKPDHLAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 479

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              K+    G  P +++Y  LI  +CK   +  A  V  DM   G SP +  YN L++  
Sbjct: 480 DILKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGC 539

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +GK +DA      +L +G+E N +TYNTL+  L   G     + +L  ++     P V
Sbjct: 540 CSKGKIEDAFRFSKEMLKKGIELNLVTYNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDV 599

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FTYN LI+G    G V R I  + +M     +P + TY+ ++    KEG     ++L   
Sbjct: 600 FTYNSLISGYGFAGNVQRCIALYEEMKRSGIKPTLKTYHLLISLCTKEG-----IELTER 654

Query: 423 LNGS-SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           L G  S  P L+ YN ++   A  G MEKA  L  QM+E  I  D  T+ +LI G  +  
Sbjct: 655 LFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 714

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           ++ E   L+ E+  R  +     Y +++ G C+ K
Sbjct: 715 KLCEVRSLIDEMNAREMEPEADTYNIIVKGHCEVK 749



 Score =  142 bits (357), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 105/413 (25%), Positives = 183/413 (44%), Gaps = 33/413 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKV 174
           +E   N ++  +C +G L  A   I+ M ++   PD H   N LIR    +  +E A K 
Sbjct: 388 NEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPD-HLAYNCLIRRFCELGEMENAEKE 446

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           +  M + G  P   TYN+++GG  ++ +      +L EM  +G  P+V++Y T++  +  
Sbjct: 447 VNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKEMEDNGTMPNVVSYGTLINCLCK 506

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             K  +A    +D   +G  P +  Y +LI+  C +  I  A     +M  +G   ++VT
Sbjct: 507 GSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGKIEDAFRFSKEMLKKGIELNLVT 566

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN+L++     GK  +A  ++  +  +G++P+  TYN+L+   G  G       + + M 
Sbjct: 567 YNTLIDGLSMTGKLSEAEDLLLEISRKGLKPDVFTYNSLISGYGFAGNVQRCIALYEEMK 626

Query: 355 EASHSPTVFTYNILINGLCKYGL-------------------------------VDRAIN 383
            +   PT+ TY++LI+   K G+                               +++A N
Sbjct: 627 RSGIKPTLKTYHLLISLCTKEGIELTERLFGEMSLKPDLLVYNGVLHCYAVHGDMEKAFN 686

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              QM+ K+   D  TYN+++    K G L E   L+  +N     P   TYN ++ G  
Sbjct: 687 LQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMNAREMEPEADTYNIIVKGHC 746

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           +      A V Y +M E G   D      L+ G     + +EA  ++ E+  R
Sbjct: 747 EVKDYMSAYVWYREMQEKGFLLDVCIGNELVSGLKEEWRSKEAEIVISEMNGR 799



 Score =  140 bits (352), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 99/433 (22%), Positives = 188/433 (43%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           +++A+ L   +      P       L+  L++  +      V   ++ S   P    Y  
Sbjct: 125 ISEAADLFFALRNEGIYPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 184

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
            +    K   +   + L + M      P V  YN ++  +    +   A   + + L + 
Sbjct: 185 AIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEMLARR 244

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P LITY  LI+  CK     ++ +V + M  +   P ++T+N+L+    K G  +DA 
Sbjct: 245 LLPSLITYNTLIDGYCKAGNPEKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAE 304

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            V+  +   G  P++ T++ L     S    +A   + +   ++      +T +IL+N L
Sbjct: 305 NVLKEMKDLGFVPDAFTFSILFDGYSSNEKAEAALGVYETAVDSGVKMNAYTCSILLNAL 364

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G +++A     + ++K   P+ V YNT++   C++G L  A   +  +      P  
Sbjct: 365 CKEGKIEKAEEILGREMAKGLVPNEVIYNTMIDGYCRKGDLVGARMKIEAMEKQGMKPDH 424

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           + YN LI    + G ME A     +M   G+SP   T+  LI G+ R  + ++  D+LKE
Sbjct: 425 LAYNCLIRRFCELGEMENAEKEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDILKE 484

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +   G      +Y  +I+ LCK  K+  A  V   M      P   +++ ++      G 
Sbjct: 485 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPKVRIYNMLIDGCCSKGK 544

Query: 553 TEEAYKLWQKLIE 565
            E+A++  +++++
Sbjct: 545 IEDAFRFSKEMLK 557



 Score = 62.8 bits (151), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 51/225 (22%), Positives = 91/225 (40%), Gaps = 36/225 (16%)

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
           S+   +A D    + NE  + P+  +  +L++ L K       IN F  ++  + +P   
Sbjct: 122 SKMISEAADLFFALRNEGIY-PSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKF 180

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
            Y   + A  K   + + L+L + +      P +  YN LIDGL K   M  A  L+ +M
Sbjct: 181 MYGKAIQAAVKLSDVGKGLELFNRMKHDRIYPSVFIYNVLIDGLCKGKRMNDAEQLFDEM 240

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           +   + P  IT+ TL                                   I G CK+   
Sbjct: 241 LARRLLPSLITYNTL-----------------------------------IDGYCKAGNP 265

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + + +V E M +   +P    F+T++K +   GM E+A  + +++
Sbjct: 266 EKSFKVRERMKADHIEPSLITFNTLLKGLFKAGMVEDAENVLKEM 310


>gi|242063942|ref|XP_002453260.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
 gi|241933091|gb|EES06236.1| hypothetical protein SORBIDRAFT_04g002660 [Sorghum bicolor]
          Length = 866

 Score =  193 bits (491), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 130/452 (28%), Positives = 217/452 (48%), Gaps = 27/452 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV- 179
           N ++  FC  G + +A +L++ M  +   P+       I  L +  R+  A ++ Q M  
Sbjct: 211 NTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQE 270

Query: 180 -MSGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
               G+P  D +T+++M+ G C  G +  A  L+D M   G    V +YN  L  +  NG
Sbjct: 271 DWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNG 330

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +  +A    ++   +G  P   TY I++  +CK+     A  V + +     SPD+VTY 
Sbjct: 331 RVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYT 390

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL++  C +G    A  +++ +  +G  PNS TYN LL SL   G     +++L+ MNE 
Sbjct: 391 SLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEK 450

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAI------------------NSF-----NQMVSKNC 393
            +S      NI+I+GLC+   +D A+                  NSF     +  +S+ C
Sbjct: 451 GYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRC 510

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD +TY+ ++ ALCKEG  +EA + L  +     SP  + Y+T I G  K G    A+ 
Sbjct: 511 LPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIK 570

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +   M + G +P   T+  LI GF    + EE + L+ E+ ++G       Y  +I   C
Sbjct: 571 VLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFC 630

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           +   V+ A+ +L+ M+ +   P+ T F  ++K
Sbjct: 631 QQGMVNKAMPLLDEMLQNELVPNITSFDLLIK 662



 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 142/517 (27%), Positives = 236/517 (45%), Gaps = 74/517 (14%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            + D  T N +LQ  C  G++  A ++ D M  RN+   F F I L RG  R  R   A 
Sbjct: 141 AQPDVFTRNLLLQALCDAGRMELAQRVFDAMPARNE---FSFGI-LARGYCRAGRSIDAL 196

Query: 173 KVLQIMVMSGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           KVL       G+P  + +  N +V G CK G +  A  L++ M V G  P+V+T+N  + 
Sbjct: 197 KVLD------GMPSMNLVVCNTVVAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARIS 250

Query: 231 TMFDNGKFKQAIGFWKD---QLRKGCP-PYLITYTILIEQVCK--------------QCG 272
            +   G+   A   ++D     + G P P  +T+ +++   C               +CG
Sbjct: 251 ALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCG 310

Query: 273 ---------------------IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
                                +  A E+L +MA EG  P+  TYN +V+  CK+GK  DA
Sbjct: 311 GFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDA 370

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             V N + S  M P+ +TY +LLH+  S+G   A ++ILD M +   +P  FTYN+L+  
Sbjct: 371 RRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAANRILDEMAQKGCAPNSFTYNVLLQS 430

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL------------ 419
           L + G    A     +M  K    D    N ++  LC+   L+ A+ +            
Sbjct: 431 LWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGLCRNSRLDVAMDIVDGMWEEGSGAL 490

Query: 420 -------LHLLNGSS----CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
                  L +++ SS    C P  ITY+ LI  L K+G  ++A     +M+   ISPD +
Sbjct: 491 GRLGNSFLSVVSDSSISQRCLPDQITYSILISALCKEGRFDEAKKKLLEMIVKDISPDSV 550

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            + T I G+C+  +   A+ +L+++ K+G       Y L+I G  +  K +  ++++  M
Sbjct: 551 IYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIMKLMSEM 610

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                 P+   +++++K     GM  +A  L  ++++
Sbjct: 611 KEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQ 647



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 129/507 (25%), Positives = 223/507 (43%), Gaps = 57/507 (11%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T + +L  FC  G + +A  L+DIM     +         + GL+R  R+ +A ++L
Sbjct: 280 DQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELL 339

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  P++ TYN++V GLCK G+   A  + + +      PDV+TY ++L      
Sbjct: 340 REMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSK 399

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A     +  +KGC P   TY +L++ + +      A  +L+ M  +G S D    
Sbjct: 400 GNIAAANRILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGC 459

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGME-----------------------PNSITYNT 332
           N +++  C+  + D A+ +++ +   G                         P+ ITY+ 
Sbjct: 460 NIIIDGLCRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSI 519

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           L+ +L   G +D   K L  M     SP    Y+  I+G CK+G    AI     M  K 
Sbjct: 520 LISALCKEGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKG 579

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
           C P   TYN ++    ++    E ++L+  +     SP ++TYN+LI    ++G + KAM
Sbjct: 580 CNPSTRTYNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAM 639

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL---------------------- 490
            L  +M++N + P+  +   LI  +C+      A  +                       
Sbjct: 640 PLLDEMLQNELVPNITSFDLLIKAYCKITDFPSAQMVFDAALRTCGQKEVLYCLMCTELT 699

Query: 491 --------KEIGKRGNKMRNS----AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
                   K I +   +MR S     Y+ +I GLC+  +VD A  +L+L+I+ R+  D  
Sbjct: 700 TYGKWIEAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPA 759

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            F  ++  + D G  ++   L  K++E
Sbjct: 760 AFMPVIDALGDRGKKQDVDMLSAKMME 786



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/439 (24%), Positives = 208/439 (47%), Gaps = 40/439 (9%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI   +R  R++    + + +++SG  PD  T N+++  LC  G++  A  + D M    
Sbjct: 116 LILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRMELAQRVFDAMPAR- 174

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY-LITYTILIEQVCKQCGIARA 276
              +  ++  + R     G+   A+     ++  G P   L+    ++   CK+  +  A
Sbjct: 175 ---NEFSFGILARGYCRAGRSIDAL-----KVLDGMPSMNLVVCNTVVAGFCKEGLVEEA 226

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL---LSRGM-EPNSITYNT 332
             +++ M ++G +P++VT+N+ ++  CK G+  DA  +  ++      G+  P+ +T++ 
Sbjct: 227 ERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQHGLPRPDQVTFDV 286

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           +L      G  D    ++DIM        V +YN  ++GL + G V  A     +M  + 
Sbjct: 287 MLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVGEAQELLREMAHEG 346

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
            QP+  TYN ++  LCKEG   +A ++ + +     SP ++TY +L+     KG +  A 
Sbjct: 347 IQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAAN 406

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            +  +M + G +P+  T+  L+    RA +  EA  LL+ + ++G  +  +   ++I GL
Sbjct: 407 RILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGL 466

Query: 513 CKSKKVDMAIQVLELM-----------------------ISSRYKPDDTVFSTIVKKVAD 549
           C++ ++D+A+ +++ M                       IS R  PD   +S ++  +  
Sbjct: 467 CRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCK 526

Query: 550 DGMTEEAYKLWQKLIEWKV 568
           +G  +EA K   KL+E  V
Sbjct: 527 EGRFDEAKK---KLLEMIV 542



 Score =  152 bits (385), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 198/434 (45%), Gaps = 27/434 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ +  T N I+   C  GK  DA ++ + +      PD     +L+        I  A+
Sbjct: 347 IQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLLHAYCSKGNIAAAN 406

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M   G  P++ TYN+++  L + G+   A  LL+ M+  G   D    N I+  +
Sbjct: 407 RILDEMAQKGCAPNSFTYNVLLQSLWRAGRTTEAERLLERMNEKGYSLDTAGCNIIIDGL 466

Query: 233 FDNGKFKQAI----GFWKD-------------------QLRKGCPPYLITYTILIEQVCK 269
             N +   A+    G W++                    + + C P  ITY+ILI  +CK
Sbjct: 467 CRNSRLDVAMDIVDGMWEEGSGALGRLGNSFLSVVSDSSISQRCLPDQITYSILISALCK 526

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
           +     A + L +M ++  SPD V Y++ ++  CK GK   A+ V+ ++  +G  P++ T
Sbjct: 527 EGRFDEAKKKLLEMIVKDISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRT 586

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YN L+     +   + + K++  M E   SP V TYN LI   C+ G+V++A+   ++M+
Sbjct: 587 YNLLIRGFEEKHKSEEIMKLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEML 646

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
                P+I +++ ++ A CK      A Q++      +C    + Y  +   L   G   
Sbjct: 647 QNELVPNITSFDLLIKAYCKITDFPSA-QMVFDAALRTCGQKEVLYCLMCTELTTYGKWI 705

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A  +    +E  +S     ++ +I G C   +V+ A  LLK +  + +    +A+  VI
Sbjct: 706 EAKNILEMALEMRVSIQSFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVI 765

Query: 510 HGL---CKSKKVDM 520
             L    K + VDM
Sbjct: 766 DALGDRGKKQDVDM 779



 Score =  102 bits (253), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 76/321 (23%), Positives = 139/321 (43%), Gaps = 12/321 (3%)

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           L    PP    Y  LI    ++  +     +  D+ + G  PD+ T N L+   C  G+ 
Sbjct: 102 LTSAPPPTTPVYNRLILAALRESRLDLVEALYKDLLLSGAQPDVFTRNLLLQALCDAGRM 161

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           + A  V + + +R    N  ++  L       G      K+LD M     S  +   N +
Sbjct: 162 ELAQRVFDAMPAR----NEFSFGILARGYCRAGRSIDALKVLDGMP----SMNLVVCNTV 213

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL----N 424
           + G CK GLV+ A     +M  +   P++VT+N  + ALCK G + +A ++   +     
Sbjct: 214 VAGFCKEGLVEEAERLVERMRVQGLAPNVVTFNARISALCKAGRVLDAYRIFQDMQEDWQ 273

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
                P  +T++ ++ G    G +++A VL   M   G      ++   + G  R  +V 
Sbjct: 274 HGLPRPDQVTFDVMLSGFCDAGFVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGRVG 333

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           EA +LL+E+   G +  +  Y +++ GLCK  K   A +V   + S    PD   +++++
Sbjct: 334 EAQELLREMAHEGIQPNSYTYNIIVSGLCKEGKAFDARRVENFIRSGVMSPDVVTYTSLL 393

Query: 545 KKVADDGMTEEAYKLWQKLIE 565
                 G    A ++  ++ +
Sbjct: 394 HAYCSKGNIAAANRILDEMAQ 414



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/244 (22%), Positives = 110/244 (45%), Gaps = 3/244 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D    +  +  +C  GK + A K++  M ++   P       LIRG     + E+  
Sbjct: 545 ISPDSVIYDTFIHGYCKHGKTSLAIKVLRDMEKKGCNPSTRTYNLLIRGFEEKHKSEEIM 604

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K++  M   G  P+ +TYN ++   C++G +  A+ LLDEM  +   P++ +++ +++  
Sbjct: 605 KLMSEMKEKGISPNVMTYNSLIKSFCQQGMVNKAMPLLDEMLQNELVPNITSFDLLIKAY 664

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPD 291
                F  A   +   LR  C    + Y ++  ++        A  +L +MA+E   S  
Sbjct: 665 CKITDFPSAQMVFDAALRT-CGQKEVLYCLMCTELTTYGKWIEAKNIL-EMALEMRVSIQ 722

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
              Y  +++  C+ G+ D A  ++  L+++    +   +  ++ +LG RG    VD +  
Sbjct: 723 SFPYKQIISGLCEVGEVDHAHSLLKLLIAKRHLFDPAAFMPVIDALGDRGKKQDVDMLSA 782

Query: 352 IMNE 355
            M E
Sbjct: 783 KMME 786


>gi|449515696|ref|XP_004164884.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 657

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 231/452 (51%), Gaps = 1/452 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D++  +  +   C +     A  L+  M     IP      ++I   ++   + +A 
Sbjct: 71  VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 130

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   MV  G   +      ++ G C +G +RSA+ L++E+S SG  P+ +TY+ ++   
Sbjct: 131 RLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGC 190

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG  ++A  F+ +   KG    + +   ++E   K      A  + +D A+E    ++
Sbjct: 191 CKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND-ALESGLANV 249

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+N+L+++ CK+GK ++A  + + ++++G+ PN ++YN ++     +   +A  K+   
Sbjct: 250 FTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKE 309

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +   +P   T+ IL++G  K G ++ A + F++M   N  P   T   ++  LCK G 
Sbjct: 310 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 369

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             E   L +        P  + YNT+IDG  K+G +  A  +Y +M E GI+P  +T+ +
Sbjct: 370 SFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTS 429

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI GFC+ + ++ A+ LL ++ ++G KM   AY  +I G CK + +  A ++L  +  + 
Sbjct: 430 LIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG 489

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+  ++++++    +    EEA  L++K++
Sbjct: 490 LSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 521



 Score =  179 bits (454), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 216/477 (45%), Gaps = 34/477 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +C +G L  A  L++ ++    +P+      LI G  +   IEKA +    M   G
Sbjct: 151 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 210

Query: 183 ----------------------------------GVPDTITYNMMVGGLCKRGQIRSAIA 208
                                             G+ +  T+N ++  LCK G++  A  
Sbjct: 211 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACN 270

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           L DE+   G  P+V++YN I+           A   +K+ L  G  P  +T+TIL++   
Sbjct: 271 LWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYF 330

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K+  I  A  +   M      P   T   ++   CK G+  +   + N  +S+G  P  +
Sbjct: 331 KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCM 390

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            YNT++      G  +    +   M E   +P+  TY  LI+G CK   +D A+   N M
Sbjct: 391 PYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM 450

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             K  + DI  Y T++   CK   +  A +LL+ L G+  SP    YN++I G      +
Sbjct: 451 KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNV 510

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E+A+ LY +M+  GI  D  T+ +LI G  ++ ++  A D+  E+  +G    + A+ ++
Sbjct: 511 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 570

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           I+GLC   + + A ++LE M      P   +++T++     +G  +EA++L  ++++
Sbjct: 571 INGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLD 627



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 105/444 (23%), Positives = 198/444 (44%), Gaps = 35/444 (7%)

Query: 155 CIN-LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
           C+N L+  ++R +   +A ++   M++ G   D  T ++M+    K G I  A     + 
Sbjct: 7   CMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQHFLQA 66

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
              G E D   Y+  +  +        A+   ++    G  P   T+T +I    K+  +
Sbjct: 67  KARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNV 126

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
           A A+ + DDM   G S ++    SL+   C QG    A++++N +   G+ PN +TY+ L
Sbjct: 127 AEALRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVL 186

Query: 334 -------------------LHSLGSRGCWDAVDKILD-------------IMNEASHS-- 359
                              + + G R    +++ IL+             + N+A  S  
Sbjct: 187 IDGCCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGL 246

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             VFT+N L++ LCK G ++ A N ++++++K   P++V+YN ++   C++  +N A ++
Sbjct: 247 ANVFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKV 306

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +  +  +P  +T+  L+DG  KKG +E A  ++ +M +  I P D T   +I G C+
Sbjct: 307 YKEMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCK 366

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A +  E  DL  +   +G       Y  +I G  K   +++A  V   M      P    
Sbjct: 367 AGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVT 426

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           +++++         + A KL   +
Sbjct: 427 YTSLIDGFCKGNNIDLALKLLNDM 450



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 129/282 (45%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I++  C  G+  +   L +    +  +P       +I G I+   I  AS V + M   G
Sbjct: 360 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 419

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P T+TY  ++ G CK   I  A+ LL++M   G + D+  Y T++         K A 
Sbjct: 420 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 479

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               +    G  P    Y  +I        +  AI++   M  EG   D+ TY SL++  
Sbjct: 480 ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 539

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K G+   A  +   +LS+G+ P+   +  L++ L ++G ++   KIL+ MN  +  P+V
Sbjct: 540 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSV 599

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
             YN LI G  K G +  A    ++M+ +   PD +TY+ ++
Sbjct: 600 LIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 641



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 122/251 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+  F   G +  AS +   M      P      +LI G  + + I+ A K+L  M  
Sbjct: 393 NTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKR 452

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D   Y  ++ G CKR  ++SA  LL+E+  +G  P+   YN+++    +    ++
Sbjct: 453 KGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEE 512

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI  +K  + +G P  L TYT LI+ + K   +  A ++  +M  +G  PD   +  L+N
Sbjct: 513 AIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLIN 572

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C +G++++A  ++ ++  + M P+ + YNTL+      G      ++ D M +    P
Sbjct: 573 GLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVP 632

Query: 361 TVFTYNILING 371
              TY+IL+NG
Sbjct: 633 DNITYDILVNG 643



 Score = 93.2 bits (230), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 72/392 (18%), Positives = 161/392 (41%), Gaps = 36/392 (9%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            P     N+++  + ++     A  L ++M + G   D  T + +LR     G   +A  
Sbjct: 2   TPSIQCMNILLTAMVRKNMTCEARELHNKMLLVGVTGDCFTLHVMLRACLKEGNILEAEQ 61

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +     +G       Y+I +  +C +     A+ +L +M   G  P   T+ S++    
Sbjct: 62  HFLQAKARGVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACV 121

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K+G   +A+ + +++++ G   N     +L+                             
Sbjct: 122 KEGNVAEALRLKDDMVNCGKSMNLAVATSLMK---------------------------- 153

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
                  G C  G +  A+   N++      P+ VTY+ ++   CK G + +A +    +
Sbjct: 154 -------GYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEM 206

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                   + + N++++G  K    + A  ++   +E+G++ +  T  TL+   C+  ++
Sbjct: 207 KTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-NVFTFNTLLSWLCKEGKM 265

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            EA +L  E+  +G      +Y  +I G C+   ++ A +V + M+ + + P+   F+ +
Sbjct: 266 NEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTIL 325

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +      G  E A+ ++ ++ +  +    TTL
Sbjct: 326 MDGYFKKGDIENAFSIFHRMKDANILPTDTTL 357



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 105/217 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  FC    +  A KL++ M R+    D      LI G  +   ++ A ++L  +
Sbjct: 426 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 485

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  P+   YN M+ G      +  AI L  +M   G   D+ TY +++  +  +G+ 
Sbjct: 486 RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL 545

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A     + L KG  P    +T+LI  +C +     A ++L+DM  +   P ++ YN+L
Sbjct: 546 LYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTL 605

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           +    K+G   +A  + + +L RG+ P++ITY+ L++
Sbjct: 606 IAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 642



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 86/185 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D K    ++  FC R  +  A +L++ +      P+     ++I G   ++ +E+A  + 
Sbjct: 458 DIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLY 517

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV  G   D  TY  ++ GL K G++  A  +  EM   G  PD   +  ++  + + 
Sbjct: 518 KKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNK 577

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+F+ A    +D   K   P ++ Y  LI    K+  +  A  + D+M   G  PD +TY
Sbjct: 578 GQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITY 637

Query: 296 NSLVN 300
           + LVN
Sbjct: 638 DILVN 642



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 5/132 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D KT   ++      G+L  AS +   M  +  +PD      LI GL    + E A K+L
Sbjct: 528 DLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKIL 587

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M     +P  + YN ++ G  K G ++ A  L DEM   G  PD ITY+ ++     N
Sbjct: 588 EDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV-----N 642

Query: 236 GKFKQAIGFWKD 247
           GKFK    F +D
Sbjct: 643 GKFKGDGNFSRD 654


>gi|222625337|gb|EEE59469.1| hypothetical protein OsJ_11675 [Oryza sativa Japonica Group]
          Length = 1095

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 227/458 (49%), Gaps = 1/458 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V   E T + +L  +C   KL  A  LI  +  R+   +      LI G  ++  + KA 
Sbjct: 400 VRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAK 459

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L+ M+  G  PD ITY+ ++ G+CK G I     +L  M  SG  P+ + Y T++   
Sbjct: 460 QILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYF 519

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G  K+A+ ++ D  R G     + +  L+    ++  IA A +    M+    S D+
Sbjct: 520 CKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDV 579

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            ++N +++  C++G   +A  V +N++  G  P+  TY +LL  L   G      + +  
Sbjct: 580 ASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVY 639

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + E + +    T N L+ G+CK+G +D A++   +MV++N  PD  TY  +L   CK G 
Sbjct: 640 LLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGK 699

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM-ENGISPDDITHR 471
           +  AL LL ++      P  I Y  L++GL  +G ++ A  ++ +++ + G+  D I + 
Sbjct: 700 VVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYN 759

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +++ G+ +  Q+ E   L++ + +      +++Y +++HG  K  ++   + +   M+  
Sbjct: 760 SMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKE 819

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             KPD+  +  ++  + + G+ E A K  +K++   VF
Sbjct: 820 GIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVF 857



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 133/517 (25%), Positives = 226/517 (43%), Gaps = 44/517 (8%)

Query: 84  VLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIM 143
           ++ +NK        K+S D   P         D  T N +L + C++GKL+ A  ++  M
Sbjct: 205 LVGINKSEYVWLFLKESLDRKFPL--------DVTTCNIVLNSLCTQGKLSKAESMLQKM 256

Query: 144 ARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
            +  ++P+      ++   ++  R + A ++L  M  +G   D  TYN+M+  LCK  + 
Sbjct: 257 -KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRS 315

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A  LL  M      PD  +YNT++   F  GK   AI  +   LR+   P + TYT L
Sbjct: 316 ARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTAL 375

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+  C+      A  VL +M I G  P  +TY++L+N  CK  K   A+ +I  L SR +
Sbjct: 376 IDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSI 435

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             N   Y  L+      G      +IL  M      P V TY+ LING+CK G++     
Sbjct: 436 SINRTMYTILIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKE 495

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCK---------------------------------- 409
             ++M      P+ V Y T++   CK                                  
Sbjct: 496 ILSRMQKSGVLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFY 555

Query: 410 -EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
            EGM+ EA Q    ++    S  + ++N +ID   ++G + +A  +Y  M+ +G  PD  
Sbjct: 556 REGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDIC 615

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ +L+ G C+   + +A + +  + ++   +       ++ G+CK   +D A+ + E M
Sbjct: 616 TYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKM 675

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++    PD   ++ ++      G    A  L Q ++E
Sbjct: 676 VTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLE 712



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 124/460 (26%), Positives = 219/460 (47%), Gaps = 1/460 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE + N ++  F   GK+  A  + + M R++  P       LI G  R  R ++A +VL
Sbjct: 333 DECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL 392

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M ++G  P  +TY+ ++ G CK  ++  A+ L+  +       +   Y  ++      
Sbjct: 393 YEMQITGVRPSELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQL 452

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A    K  L  G  P +ITY+ LI  +CK   I    E+L  M   G  P+ V Y
Sbjct: 453 GEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLY 512

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +LV + CK G   +A+    ++   G+  NS+ +N LL S    G     ++    M+ 
Sbjct: 513 TTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSR 572

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              S  V ++N +I+  C+ G V  A + ++ MV     PDI TY ++L  LC+ G L +
Sbjct: 573 MKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQ 632

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A + +  L   +C+    T NTL+ G+ K G +++A+ L  +M+   I PD  T+  L+ 
Sbjct: 633 AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 692

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL-ELMISSRYK 534
           GFC+  +V  A+ LL+ + ++G      AY  +++GL    +V  A  +  E++      
Sbjct: 693 GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLY 752

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            D   +++++      G   E  +L + + E +V+    +
Sbjct: 753 ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSAS 792



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 123/494 (24%), Positives = 224/494 (45%), Gaps = 52/494 (10%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  FC  G+++ A +++  M      PD      LI G+ ++  I +  ++L  M  SG
Sbjct: 445 LIDGFCQLGEVSKAKQILKCMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSG 504

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG------ 236
            +P+ + Y  +V   CK G  + A+    ++  SG   + + +N +L + +  G      
Sbjct: 505 VLPNNVLYTTLVFYFCKAGHAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAE 564

Query: 237 KFKQ-----------------------------AIGFWKDQLRKGCPPYLITYTILIEQV 267
           +FKQ                             A   + + +R G PP + TY  L+  +
Sbjct: 565 QFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGL 624

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   + +A E +  +  + C+ D  T N+L+   CK G  D+A+ +   +++R + P++
Sbjct: 625 CQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDT 684

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
            TY  LL     RG       +L +M E    P    Y  L+NGL   G V  A   F +
Sbjct: 685 YTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQE 744

Query: 388 MVSKN-CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           ++ K     D + YN+++    K G +NE  +L+  ++ +   P   +YN L+ G  KKG
Sbjct: 745 IICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKG 804

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            + + + LY  M++ GI PD++T+R LI+G C    +E AV  L+++   G    N A+ 
Sbjct: 805 QLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFD 864

Query: 507 LVIHGLCKSKKVDMAIQVLELM-----ISSRYK-----------PDDTVFSTIVKKVADD 550
           ++I    +  K+  A+Q+   M     I   ++           P +   S+IV+ +   
Sbjct: 865 ILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKC 924

Query: 551 GMTEEAYKLWQKLI 564
           G  EEA  ++  ++
Sbjct: 925 GKVEEAIIVFSSIM 938



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 112/399 (28%), Positives = 190/399 (47%), Gaps = 17/399 (4%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            DEKT N +L   C  G L +A  L + M  RN +PD +    L+ G  +  ++  A  +L
Sbjct: 648  DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILL 707

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV-SGCEPDVITYNTILRTMFD 234
            Q+M+  G VPDTI Y  ++ GL   GQ+++A  +  E+    G   D I YN+++     
Sbjct: 708  QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 767

Query: 235  NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             G+  +     ++       P   +Y IL+    K+  ++R + +  DM  EG  PD VT
Sbjct: 768  GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVT 827

Query: 295  YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR-------------- 340
            Y  L+   C+ G  + AV  +  ++  G+ P+++ ++ L+ +   +              
Sbjct: 828  YRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMK 887

Query: 341  --GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
              G  D   ++ + M      P+    + ++ GLCK G V+ AI  F+ ++     P I 
Sbjct: 888  WVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIA 947

Query: 399  TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
            T+ T++  LCKE  +++A  L  L+        ++TYN LI GL  K C+  A+ LY +M
Sbjct: 948  TFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEM 1007

Query: 459  MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
               G+ P+  T+ TL         +++   LLK+I  RG
Sbjct: 1008 KSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRG 1046



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 118/468 (25%), Positives = 220/468 (47%), Gaps = 17/468 (3%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            +  D  + N I+ ++C RG + +A  + D M R    PD     +L+RGL +   + +A 
Sbjct: 575  ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 634

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + +  ++      D  T N ++ G+CK G +  A+ L ++M      PD  TY  +L   
Sbjct: 635  EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGF 694

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-EGCSPD 291
               GK   A+   +  L KG  P  I YT L+  +  +  +  A  +  ++   EG   D
Sbjct: 695  CKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 754

Query: 292  IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
             + YNS++N   K G+ ++   ++ N+    + P+S +YN L+H    +G       +  
Sbjct: 755  CIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 814

Query: 352  IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
             M +    P   TY +LI GLC+YGL++ A+    +MV +   PD + ++ ++ A  ++ 
Sbjct: 815  DMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKS 874

Query: 412  MLNEALQLLHLLN----------------GSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
             ++ ALQL   +                      P  +  ++++ GL K G +E+A++++
Sbjct: 875  KMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVF 934

Query: 456  GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
              +M  G+ P   T  TL+ G C+  ++++A  L + +   G K+    Y ++I GLC  
Sbjct: 935  SSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNK 994

Query: 516  KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            K +  A+ + E M S    P+ T + T+   +   G  ++  KL + +
Sbjct: 995  KCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDI 1042



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 110/443 (24%), Positives = 214/443 (48%), Gaps = 3/443 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +   GK+ DA+  I  M           C N++  L+ I++ E     L+  +   
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE-PDVITYNTILRTMFDNGKFKQA 241
              D  T N+++  LC +G++  A ++L +M    C  P+ +TYNTIL      G+ K A
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCKSA 283

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +    D  + G    L TY I+I+++CK    ARA  +L  M     +PD  +YN+L++ 
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHG 343

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
              +GK + A+ + N +L + ++P+  TY  L+      G  D   ++L  M      P+
Sbjct: 344 FFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPS 403

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TY+ L+NG CK+  +  A++    + S++   +   Y  ++   C+ G +++A Q+L 
Sbjct: 404 ELTYSALLNGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILK 463

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +      P +ITY+ LI+G+ K G + +   +  +M ++G+ P+++ + TL++ FC+A 
Sbjct: 464 CMLADGIDPDVITYSALINGMCKMGMIHETKEILSRMQKSGVLPNNVLYTTLVFYFCKAG 523

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
             +EA+    +I + G    +  +  ++    +   +  A Q  + M   +   D   F+
Sbjct: 524 HAKEALKYFVDIYRSGLVANSVIHNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFN 583

Query: 542 TIVKKVADDGMTEEAYKLWQKLI 564
            I+      G   EA+ ++  ++
Sbjct: 584 CIIDSYCQRGNVLEAFSVYDNMV 606



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 217/461 (47%), Gaps = 17/461 (3%)

Query: 120  NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
            +N +L +F   G + +A +    M+R     D      +I    +   + +A  V   MV
Sbjct: 547  HNALLCSFYREGMIAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMV 606

Query: 180  MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
              G  PD  TY  ++ GLC+ G +  A   +  +    C  D  T NT+L  +  +G   
Sbjct: 607  RHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLD 666

Query: 240  QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            +A+   +  + +   P   TYTIL++  CK+  +  A+ +L  M  +G  PD + Y  L+
Sbjct: 667  EALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLL 726

Query: 300  NFSCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            N    +G+   A  +   ++ + G+  + I YN++++     G  + +++++  M+E   
Sbjct: 727  NGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEV 786

Query: 359  SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
             P+  +YNIL++G  K G + R +  +  MV +  +PD VTY  ++  LC+ G++  A++
Sbjct: 787  YPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVK 846

Query: 419  LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG----------------QMMENG 462
             L  +      P  + ++ LI   ++K  M  A+ L+                  M   G
Sbjct: 847  FLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALG 906

Query: 463  ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
            + P ++   +++ G C+  +VEEA+ +   I + G     + +  ++HGLCK  K+D A 
Sbjct: 907  VVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAF 966

Query: 523  QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             + +LM S   K D   ++ ++  + +     +A  L++++
Sbjct: 967  HLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEM 1007



 Score =  105 bits (261), Expect = 9e-20,   Method: Compositional matrix adjust.
 Identities = 100/449 (22%), Positives = 186/449 (41%), Gaps = 100/449 (22%)

Query: 214 SVSGCEPDVIT------YNTILRTMFDNGKFKQAIGFWKDQL------RKGCPPYLITYT 261
           SV G E  +IT      + T+ +  + +GK  +A G    ++      + G       Y 
Sbjct: 53  SVHGVESSIITVLAMQRWETLSQMAYKSGKLDKAHGKLALRMLDSIVQQSGLDRITHIYC 112

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEG----------------CSP-DIVTYNSLVNFSCK 304
           + +  + +    ++A+ VL  +A+ G                C P ++ + + LVN   K
Sbjct: 113 MAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVK 172

Query: 305 QGKYDDAVLVI---------------NNLLS--------------------RGMEPNSIT 329
           +GK  DA   I               NN+L+                    R    +  T
Sbjct: 173 EGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRKFPLDVTT 232

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN-----GLCKYGL------- 377
            N +L+SL ++G     + +L  M      P   TYN ++N     G CK  L       
Sbjct: 233 CNIVLNSLCTQGKLSKAESMLQKMKNC-RLPNAVTYNTILNWYVKKGRCKSALRILDDME 291

Query: 378 ---VDRAINSFNQMVSKNCQ--------------------PDIVTYNTVLGALCKEGMLN 414
              ++  + ++N M+ K C+                    PD  +YNT++     EG +N
Sbjct: 292 KNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKIN 351

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A+ + + +   S  P + TY  LIDG  + G  ++A  +  +M   G+ P ++T+  L+
Sbjct: 352 LAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPSELTYSALL 411

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C+  ++  A+DL+K +  R   +  + Y ++I G C+  +V  A Q+L+ M++    
Sbjct: 412 NGYCKHSKLGPALDLIKYLRSRSISINRTMYTILIDGFCQLGEVSKAKQILKCMLADGID 471

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           PD   +S ++  +   GM  E  ++  ++
Sbjct: 472 PDVITYSALINGMCKMGMIHETKEILSRM 500



 Score = 92.8 bits (229), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 117/257 (45%), Gaps = 16/257 (6%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++  +  +G+L+    L   M +    PD      LI GL     IE A K L+ MV+
Sbjct: 794  NILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVL 853

Query: 181  SGGVPDTITYNMMVGGLCKR----------------GQIRSAIALLDEMSVSGCEPDVIT 224
             G  PD + +++++    ++                G I  A  L ++M   G  P  + 
Sbjct: 854  EGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMKWVGDIDGAFELKEDMKALGVVPSEVA 913

Query: 225  YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
             ++I+R +   GK ++AI  +   +R G  P + T+T L+  +CK+  I  A  +   M 
Sbjct: 914  ESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQLME 973

Query: 285  IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
              G   D+VTYN L+   C +    DA+ +   + S+G+ PN  TY TL  ++ + G   
Sbjct: 974  SCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATGTMQ 1033

Query: 345  AVDKILDIMNEASHSPT 361
              +K+L  + +    P+
Sbjct: 1034 DGEKLLKDIEDRGIVPS 1050


>gi|125575277|gb|EAZ16561.1| hypothetical protein OsJ_32034 [Oryza sativa Japonica Group]
          Length = 526

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 187/356 (52%), Gaps = 9/356 (2%)

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDNGKFKQ 240
           G+PD  +YN+++ GLC   + + A+ LL  M+  G  C PDV++Y+T++     NG FK+
Sbjct: 47  GIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVI-----NGFFKE 101

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
             G     L +   P ++TY  +I  +CK   + +A+EVL  M   G  PD +TYNS+V+
Sbjct: 102 --GDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVH 159

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G+  +A++ +  + S G+EP+ +TYN+L+  L   G      KI D M +    P
Sbjct: 160 GFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP 219

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TY  L+ G    G +       + MV     P+   ++ ++ A  K+  + EA+ + 
Sbjct: 220 DITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF 279

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +     +P  +TY T+ID L K G +E AM+ + QM++ G+ PD I + +LI   C  
Sbjct: 280 SKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIF 339

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           D+ E+A +L  E+  RG  +    +  +I   CK  +V  + ++ +LM+    KPD
Sbjct: 340 DKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 112/368 (30%), Positives = 185/368 (50%), Gaps = 15/368 (4%)

Query: 135 DASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGG--VPDTITYN 191
           DA  + D + RR  IPD F + I L+ GL   +R ++A ++L IM   GG   PD ++Y+
Sbjct: 35  DARHVFDELLRRG-IPDVFSYNI-LLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            ++ G  K G        LD+M      P+V+TYN+I+  +       +A+      ++ 
Sbjct: 93  TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P  +TY  ++   C       AI  L  M  +G  PD+VTYNSL+++ CK G+  +A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             + +++  RG++P+  TY TLL    ++G    +  +LD+M      P  + ++IL+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
             K   V+ A+  F++M  +   P+ VTY TV+  LCK G + +A+     +      P 
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA---VD 488
            I YN+LI  L      EKA  L+ +M++ GI    I   ++I   C+  +V E+    D
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFD 385

Query: 489 LLKEIGKR 496
           L+  IG +
Sbjct: 386 LMVRIGVK 393



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 171/323 (52%), Gaps = 10/323 (3%)

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFS 302
           + + LR+G P  + +Y IL+  +C +     A+E+L  MA +G  C PD+V+Y++++N  
Sbjct: 40  FDELLRRGIPD-VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF 98

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+G  D        +L + + PN +TYN+++ +L      D   ++L  M ++   P  
Sbjct: 99  FKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDC 151

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN +++G C  G    AI    +M S   +PD+VTYN+++  LCK G   EA ++   
Sbjct: 152 MTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS 211

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P + TY TL+ G A KG + +   L   M+ NGI P+      L+  + + ++
Sbjct: 212 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 271

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEEA+ +  ++ ++G       Y  VI  LCKS +V+ A+   E MI    +PD  V+++
Sbjct: 272 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 331

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++  +      E+A +L+ ++++
Sbjct: 332 LIHSLCIFDKWEKAEELFLEMLD 354



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 124/491 (25%), Positives = 216/491 (43%), Gaps = 63/491 (12%)

Query: 84  VLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKL 139
           V + N  L GL    +S +      + + DG     D  + + ++  F   G L      
Sbjct: 51  VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL------ 104

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK 199
            D M  +   P+     ++I  L +   ++KA +VL  MV SG +PD +TYN +V G C 
Sbjct: 105 -DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
            GQ + AI  L +M   G EPDV+TYN+++  +  NG+  +A   +    ++G  P + T
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223

Query: 260 Y-----------------------------------TILIEQVCKQCGIARAIEVLDDMA 284
           Y                                   +IL+    KQ  +  A+ V   M 
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +G +P+ VTY ++++  CK G+ +DA+L    ++  G+ P+SI YN+L+HSL     W+
Sbjct: 284 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWE 343

Query: 345 AVDKI-LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             +++ L++++      T+F +N +I+  CK G V  +   F+ MV    +PDI+T    
Sbjct: 344 KAEELFLEMLDRGICLSTIF-FNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITL--- 399

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
                  G  +EA  L    + +   P   TY  + + +  +G +E+   L+  M +NG 
Sbjct: 400 -------GRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIGQGLLEELDQLFLSMEDNGC 452

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
           + D      ++    +  ++  A   L  I ++   +  S   L I  L   K      Q
Sbjct: 453 TVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEASTASLFIDLLSGGK-----YQ 507

Query: 524 VLELMISSRYK 534
              + +  +YK
Sbjct: 508 EYHIFLPEKYK 518



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 182/365 (49%), Gaps = 10/365 (2%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTIL 263
           A  + DE+   G  PDV +YN +L  + D  + ++A+         G  CPP +++Y+ +
Sbjct: 36  ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I    K+         LD M  +  SP++VTYNS++   CK    D A+ V+  ++  G+
Sbjct: 95  INGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 147

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ +TYN+++H   S G        L  M      P V TYN L++ LCK G    A  
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F+ M  +  +PDI TY T+L     +G L E   LL L+  +   P    ++ L+   A
Sbjct: 208 IFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 267

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K+  +E+AM+++ +M + G++P+ +T+ T+I   C++ +VE+A+   +++   G +  + 
Sbjct: 268 KQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSI 327

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +IH LC   K + A ++   M+          F++I+     +G   E+ KL+  +
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387

Query: 564 IEWKV 568
           +   V
Sbjct: 388 VRIGV 392


>gi|15218284|ref|NP_172453.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75276860|sp|O04504.1|PPR27_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At1g09820
 gi|2160173|gb|AAB60736.1| Similar to N. tabacum salt-inducible protein (gb|U08285)
           [Arabidopsis thaliana]
 gi|332190378|gb|AEE28499.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 606

 Score =  193 bits (490), Expect = 2e-46,   Method: Compositional matrix adjust.
 Identities = 111/408 (27%), Positives = 214/408 (52%), Gaps = 11/408 (2%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  L+  L++ +R      V + M+     P+  T+N+++  LCK G++  A  ++++M 
Sbjct: 191 CKPLMIALLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMK 250

Query: 215 VSGCEPDVITYNTILR---TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           V GC P+V++YNT++     +  NGK  +A    K+ +     P L T+ ILI+   K  
Sbjct: 251 VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDD 310

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            +  +++V  +M  +   P++++YNSL+N  C  GK  +A+ + + ++S G++PN ITYN
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYN 370

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQM 388
            L++        D + + LD+          PT   YN+LI+  CK G +D       +M
Sbjct: 371 ALINGFCKN---DMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEM 427

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             +   PD+ TYN ++  LC+ G +  A +L   L  S   P L+T++ L++G  +KG  
Sbjct: 428 EREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLT-SKGLPDLVTFHILMEGYCRKGES 486

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK-RGNKMRNSAYRL 507
            KA +L  +M + G+ P  +T+  ++ G+C+   ++ A ++  ++ K R  +M  ++Y +
Sbjct: 487 RKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNV 546

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           ++ G  +  K++ A  +L  M+     P+   +  + +++ D G   +
Sbjct: 547 LLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDQGFVPD 594



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 95/322 (29%), Positives = 161/322 (50%), Gaps = 4/322 (1%)

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           +K+ +R+   P + T+ ++I  +CK   + +A +V++DM + GCSP++V+YN+L++  CK
Sbjct: 211 YKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNTLIDGYCK 270

Query: 305 ---QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
               GK   A  V+  ++   + PN  T+N L+             K+   M +    P 
Sbjct: 271 LGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPN 330

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V +YN LINGLC  G +  AI+  ++MVS   QP+++TYN ++   CK  ML EAL +  
Sbjct: 331 VISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFG 390

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            + G    P    YN LID   K G ++    L  +M   GI PD  T+  LI G CR  
Sbjct: 391 SVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNG 450

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            +E A  L  ++  +G       + +++ G C+  +   A  +L+ M     KP    ++
Sbjct: 451 NIEAAKKLFDQLTSKGLP-DLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYN 509

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
            ++K    +G  + A  +  ++
Sbjct: 510 IVMKGYCKEGNLKAATNMRTQM 531



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 104/369 (28%), Positives = 191/369 (51%), Gaps = 7/369 (1%)

Query: 134 TDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
            D   +   M RR   P+ F F + +I  L +  ++ KA  V++ M + G  P+ ++YN 
Sbjct: 205 ADVEYVYKEMIRRKIQPNVFTFNV-VINALCKTGKMNKARDVMEDMKVYGCSPNVVSYNT 263

Query: 193 MVGGLCK---RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           ++ G CK    G++  A A+L EM  +   P++ T+N ++   + +     ++  +K+ L
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEML 323

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            +   P +I+Y  LI  +C    I+ AI + D M   G  P+++TYN+L+N  CK     
Sbjct: 324 DQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLK 383

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A+ +  ++  +G  P +  YN L+ +    G  D    + + M      P V TYN LI
Sbjct: 384 EALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
            GLC+ G ++ A   F+Q+ SK   PD+VT++ ++   C++G   +A  LL  ++     
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLK 502

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGISPDDITHRTLIWGFCRADQVEEAVD 488
           P  +TYN ++ G  K+G ++ A  +  QM  E  +  +  ++  L+ G+ +  ++E+A  
Sbjct: 503 PRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562

Query: 489 LLKEIGKRG 497
           LL E+ ++G
Sbjct: 563 LLNEMLEKG 571



 Score =  144 bits (362), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 95/367 (25%), Positives = 186/367 (50%), Gaps = 15/367 (4%)

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG--KFKQAIGFWKDQLRK-GCPPYLIT 259
           I  AI++ D + V+    D++       + F+ G   FK++ G++  +L    C P +I 
Sbjct: 139 IFHAISMCDNVCVNSIIADMLVLAYANNSRFELGFEAFKRS-GYYGYKLSALSCKPLMIA 197

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
                  + K+   A    V  +M      P++ T+N ++N  CK GK + A  V+ ++ 
Sbjct: 198 -------LLKENRSADVEYVYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMK 250

Query: 320 SRGMEPNSITYNTLLHS---LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
             G  PN ++YNTL+     LG  G     D +L  M E   SP + T+NILI+G  K  
Sbjct: 251 VYGCSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDD 310

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +  ++  F +M+ ++ +P++++YN+++  LC  G ++EA+ +   +  +   P LITYN
Sbjct: 311 NLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYN 370

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            LI+G  K   +++A+ ++G +   G  P    +  LI  +C+  ++++   L +E+ + 
Sbjct: 371 ALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       Y  +I GLC++  ++ A ++ +  ++S+  PD   F  +++     G + +A
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFD-QLTSKGLPDLVTFHILMEGYCRKGESRKA 489

Query: 557 YKLWQKL 563
             L +++
Sbjct: 490 AMLLKEM 496



 Score =  144 bits (362), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 91/330 (27%), Positives = 162/330 (49%), Gaps = 5/330 (1%)

Query: 121 NKILQNFC---SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           N ++  +C     GK+  A  ++  M   +  P+      LI G  + D +  + KV + 
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKE 321

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+     P+ I+YN ++ GLC  G+I  AI++ D+M  +G +P++ITYN ++     N  
Sbjct: 322 MLDQDVKPNVISYNSLINGLCNGGKISEAISMRDKMVSAGVQPNLITYNALINGFCKNDM 381

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            K+A+  +     +G  P    Y +LI+  CK   I     + ++M  EG  PD+ TYN 
Sbjct: 382 LKEALDMFGSVKGQGAVPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   C+ G  + A  + + L S+G+ P+ +T++ L+     +G       +L  M++  
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTSKGL-PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMG 500

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQM-VSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             P   TYNI++ G CK G +  A N   QM   +  + ++ +YN +L    ++G L +A
Sbjct: 501 LKPRHLTYNIVMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
             LL+ +      P  ITY  + + +  +G
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIVKEEMVDQG 590



 Score =  117 bits (292), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 84/322 (26%), Positives = 148/322 (45%), Gaps = 8/322 (2%)

Query: 113 VENDEKTN----NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           VEND   N    N ++  F     L  + K+   M  ++  P+     +LI GL    +I
Sbjct: 288 VENDVSPNLTTFNILIDGFWKDDNLPGSMKVFKEMLDQDVKPNVISYNSLINGLCNGGKI 347

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A  +   MV +G  P+ ITYN ++ G CK   ++ A+ +   +   G  P    YN +
Sbjct: 348 SEAISMRDKMVSAGVQPNLITYNALINGFCKNDMLKEALDMFGSVKGQGAVPTTRMYNML 407

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      GK        ++  R+G  P + TY  LI  +C+   I  A ++ D +  +G 
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTSKGL 467

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD+VT++ L+   C++G+   A +++  +   G++P  +TYN ++      G   A   
Sbjct: 468 -PDLVTFHILMEGYCRKGESRKAAMLLKEMSKMGLKPRHLTYNIVMKGYCKEGNLKAATN 526

Query: 349 ILDIMN-EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +   M  E      V +YN+L+ G  + G ++ A    N+M+ K   P+ +TY  V   +
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEM 586

Query: 408 CKEGMLNEALQLLHLLNGSSCS 429
             +G + +     HL N S+ S
Sbjct: 587 VDQGFVPDIEG--HLFNVSTKS 606


>gi|449462477|ref|XP_004148967.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 597

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 130/489 (26%), Positives = 236/489 (48%), Gaps = 33/489 (6%)

Query: 100 SHDPSLPSSDGPFVEN-DEKTNNKILQNF----------------CSRGKLT--DASKLI 140
           +H P++PSS+  F      K+ N   QNF                C  G +T   A +  
Sbjct: 25  THSPTIPSSNPHFSSAVHHKSLNVSPQNFNTPISFQQQLSMFLHNCKTGNITAIQAFQFF 84

Query: 141 DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
            +M   N  P      +L+ GL +I    +   +   M +SG  PD  T N+++  LC  
Sbjct: 85  HLMMYSNPTPPLSSFTHLLSGLAKIKHYSQVFYLYNQMRLSGISPDCCTLNILLNCLCNV 144

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
            ++   +A++  +   G  PD++TY T+++ +    +  +A   +    + GC P  ITY
Sbjct: 145 NRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRMQKLGCTPNAITY 204

Query: 261 TILIEQVCKQCGIARAI----EVLDDMAIEGCS--PDIVTYNSLVNFSCKQGKYDDAVLV 314
             L++ +C+   I+ A+    E+L+D ++ G +  P +++Y+ +++  CK  + D+A  +
Sbjct: 205 GTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDALCKDRREDEARDL 264

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
              +  +GM P  I+Y +L+        W+   ++ + M      P V T+N+LI+ LCK
Sbjct: 265 FEEMKVQGMTPTVISYTSLM--------WEEAKRLFNEMVNQGVQPNVVTFNVLIDVLCK 316

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G V  A +    M+ +   P+++TYN+++   C  G LN A +L   +    C P +I 
Sbjct: 317 EGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVSMPSKGCEPDVIC 376

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y  LI+G  K   +E+AM LY  M++ G  PD  T+  L+ G  +  +V +A  L   + 
Sbjct: 377 YTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGKVGDAKKLFGVMK 436

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
             G       Y + ++GLCK+  +  A+++   + S   K D   F+ ++  +   G  E
Sbjct: 437 VYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNCLIDGLCKAGKLE 496

Query: 555 EAYKLWQKL 563
            A++L++KL
Sbjct: 497 TAWELFEKL 505



 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/456 (27%), Positives = 229/456 (50%), Gaps = 14/456 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   C+  ++ +   ++  + RR  IPD      LI+GL    RI KA+ +   M
Sbjct: 133 TLNILLNCLCNVNRVGEGLAVMAGILRRGYIPDIVTYTTLIKGLCMEHRISKAALLFTRM 192

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM----SVSGC--EPDVITYNTILRTM 232
              G  P+ ITY  ++ GLC+ G I  A+ L  EM    S+ G   +P VI+Y+ I+  +
Sbjct: 193 QKLGCTPNAITYGTLMKGLCRTGNISIALKLHQEMLNDSSLYGINFKPVVISYSIIIDAL 252

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             + +  +A   +++   +G  P +I+YT L+ +  K+        + ++M  +G  P++
Sbjct: 253 CKDRREDEARDLFEEMKVQGMTPTVISYTSLMWEEAKR--------LFNEMVNQGVQPNV 304

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VT+N L++  CK+GK  +A  ++  ++ RG+ PN +TYN+L+      G  ++  ++   
Sbjct: 305 VTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSARELFVS 364

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P V  Y +LING CK   V+ A+  +N M+    +PD+ TY  +L  L + G 
Sbjct: 365 MPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGLFQGGK 424

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           + +A +L  ++        L  Y   ++GL K GC+ +AM L+ ++    I  D      
Sbjct: 425 VGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDIECFNC 484

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI G C+A ++E A +L +++ +   +     Y ++IH  C+  +V  A  + + M  + 
Sbjct: 485 LIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQKMEKNG 544

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             PD   ++T+++   +    E+  +L   +++  V
Sbjct: 545 CTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDV 580



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 88/298 (29%), Positives = 151/298 (50%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           E+A ++   MV  G  P+ +T+N+++  LCK G++  A  LL+ M   G  P+++TYN++
Sbjct: 286 EEAKRLFNEMVNQGVQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSL 345

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G    A   +     KGC P +I YT+LI   CK   +  A+++ + M   G 
Sbjct: 346 IEGFCLVGDLNSARELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGK 405

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD+ TY +L+    + GK  DA  +   +   G+  +   Y   L+ L   GC     +
Sbjct: 406 RPDVKTYGALLTGLFQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAME 465

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + + +   +    +  +N LI+GLCK G ++ A   F ++  +  QPD+VTYN ++   C
Sbjct: 466 LFNKLKSYNIKLDIECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFC 525

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           + G + +A  L   +  + C+P  ITY TLI G  +   +EK + L   M++  +S D
Sbjct: 526 RGGQVVKANILFQKMEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLD 583



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 73/285 (25%), Positives = 131/285 (45%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T N ++   C  GK+ +A  L+++M +R  +P+     +LI G   +  +  A 
Sbjct: 300 VQPNVVTFNVLIDVLCKEGKVIEAKDLLEVMIQRGIVPNLLTYNSLIEGFCLVGDLNSAR 359

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M   G  PD I Y +++ G CK  ++  A+ L + M   G  PDV TY  +L  +
Sbjct: 360 ELFVSMPSKGCEPDVICYTVLINGYCKTSKVEEAMKLYNGMLQVGKRPDVKTYGALLTGL 419

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           F  GK   A   +      G P  L  Y I +  +CK   +  A+E+ + +       DI
Sbjct: 420 FQGGKVGDAKKLFGVMKVYGIPGDLYIYGIFLNGLCKNGCLFEAMELFNKLKSYNIKLDI 479

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             +N L++  CK GK + A  +   L    ++P+ +TYN ++H     G     + +   
Sbjct: 480 ECFNCLIDGLCKAGKLETAWELFEKLPQEELQPDVVTYNIMIHEFCRGGQVVKANILFQK 539

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
           M +   +P   TY  LI G  +   +++ +   + MV ++   D+
Sbjct: 540 MEKNGCTPDKITYATLIRGFFESKKLEKVVELLHMMVQRDVSLDV 584


>gi|449461475|ref|XP_004148467.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Cucumis sativus]
          Length = 775

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/452 (25%), Positives = 231/452 (51%), Gaps = 1/452 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D++  +  +   C +     A  L+  M     IP      ++I   ++   + +A 
Sbjct: 189 VELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEAL 248

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   MV  G   +      ++ G C +G +RSA+ L++E+S SG  P+ +TY+ ++   
Sbjct: 249 RLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGC 308

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG  ++A  F+ +   KG    + +   ++E   K      A  + +D A+E    ++
Sbjct: 309 CKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFND-ALESGLANV 367

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T+N+L+++ CK+GK ++A  + + ++++G+ PN ++YN ++     +   +A  K+   
Sbjct: 368 FTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKE 427

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +   +P   T+ IL++G  K G ++ A + F++M   N  P   T   ++  LCK G 
Sbjct: 428 MLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGR 487

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
             E   L +        P  + YNT+IDG  K+G +  A  +Y +M E GI+P  +T+ +
Sbjct: 488 SFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTS 547

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI GFC+ + ++ A+ LL ++ ++G KM   AY  +I G CK + +  A ++L  +  + 
Sbjct: 548 LIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAG 607

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+  ++++++    +    EEA  L++K++
Sbjct: 608 LSPNRFIYNSMITGFKNMNNVEEAIDLYKKMV 639



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 121/477 (25%), Positives = 216/477 (45%), Gaps = 34/477 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ +C +G L  A  L++ ++    +P+      LI G  +   IEKA +    M   G
Sbjct: 269 LMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDGCCKNGNIEKAFEFYSEMKTKG 328

Query: 183 ----------------------------------GVPDTITYNMMVGGLCKRGQIRSAIA 208
                                             G+ +  T+N ++  LCK G++  A  
Sbjct: 329 IRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLANVFTFNTLLSWLCKEGKMNEACN 388

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           L DE+   G  P+V++YN I+           A   +K+ L  G  P  +T+TIL++   
Sbjct: 389 LWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYKEMLDNGFTPNAVTFTILMDGYF 448

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K+  I  A  +   M      P   T   ++   CK G+  +   + N  +S+G  P  +
Sbjct: 449 KKGDIENAFSIFHRMKDANILPTDTTLGIIIKGLCKAGRSFEGRDLFNKFVSQGFVPTCM 508

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            YNT++      G  +    +   M E   +P+  TY  LI+G CK   +D A+   N M
Sbjct: 509 PYNTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDM 568

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             K  + DI  Y T++   CK   +  A +LL+ L G+  SP    YN++I G      +
Sbjct: 569 KRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNV 628

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           E+A+ LY +M+  GI  D  T+ +LI G  ++ ++  A D+  E+  +G    + A+ ++
Sbjct: 629 EEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVL 688

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           I+GLC   + + A ++LE M      P   +++T++     +G  +EA++L  ++++
Sbjct: 689 INGLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLD 745



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 76/282 (26%), Positives = 129/282 (45%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I++  C  G+  +   L +    +  +P       +I G I+   I  AS V + M   G
Sbjct: 478 IIKGLCKAGRSFEGRDLFNKFVSQGFVPTCMPYNTIIDGFIKEGNINLASNVYREMCEVG 537

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P T+TY  ++ G CK   I  A+ LL++M   G + D+  Y T++         K A 
Sbjct: 538 ITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAH 597

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               +    G  P    Y  +I        +  AI++   M  EG   D+ TY SL++  
Sbjct: 598 ELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGL 657

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K G+   A  +   +LS+G+ P+   +  L++ L ++G ++   KIL+ MN  +  P+V
Sbjct: 658 LKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSV 717

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
             YN LI G  K G +  A    ++M+ +   PD +TY+ ++
Sbjct: 718 LIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV 759



 Score =  108 bits (271), Expect = 6e-21,   Method: Compositional matrix adjust.
 Identities = 70/251 (27%), Positives = 122/251 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+  F   G +  AS +   M      P      +LI G  + + I+ A K+L  M  
Sbjct: 511 NTIIDGFIKEGNINLASNVYREMCEVGITPSTVTYTSLIDGFCKGNNIDLALKLLNDMKR 570

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G   D   Y  ++ G CKR  ++SA  LL+E+  +G  P+   YN+++    +    ++
Sbjct: 571 KGLKMDIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEE 630

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI  +K  + +G P  L TYT LI+ + K   +  A ++  +M  +G  PD   +  L+N
Sbjct: 631 AIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLIN 690

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C +G++++A  ++ ++  + M P+ + YNTL+      G      ++ D M +    P
Sbjct: 691 GLCNKGQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVP 750

Query: 361 TVFTYNILING 371
              TY+IL+NG
Sbjct: 751 DNITYDILVNG 761



 Score = 91.7 bits (226), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 57/217 (26%), Positives = 105/217 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  FC    +  A KL++ M R+    D      LI G  +   ++ A ++L  +
Sbjct: 544 TYTSLIDGFCKGNNIDLALKLLNDMKRKGLKMDIKAYGTLIDGFCKRRDMKSAHELLNEL 603

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  P+   YN M+ G      +  AI L  +M   G   D+ TY +++  +  +G+ 
Sbjct: 604 RGAGLSPNRFIYNSMITGFKNMNNVEEAIDLYKKMVNEGIPCDLKTYTSLIDGLLKSGRL 663

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A     + L KG  P    +T+LI  +C +     A ++L+DM  +   P ++ YN+L
Sbjct: 664 LYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKILEDMNGKNMIPSVLIYNTL 723

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           +    K+G   +A  + + +L RG+ P++ITY+ L++
Sbjct: 724 IAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILVN 760



 Score = 84.0 bits (206), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 57/289 (19%), Positives = 128/289 (44%), Gaps = 1/289 (0%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G   D   Y+  V+  C +     A+ ++  + + G  P   T+ +++ +    G     
Sbjct: 188 GVELDQEAYSIFVHLLCLKPNSGYALSLLREMRAAGWIPPEGTFTSVITACVKEGNVAEA 247

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            ++ D M     S  +     L+ G C  G +  A+   N++      P+ VTY+ ++  
Sbjct: 248 LRLKDDMVNCGKSMNLAVATSLMKGYCMQGNLRSALVLVNEISESGLVPNKVTYSVLIDG 307

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK G + +A +    +        + + N++++G  K    + A  ++   +E+G++ +
Sbjct: 308 CCKNGNIEKAFEFYSEMKTKGIRSSVYSLNSILEGYLKCQSWQNAFTMFNDALESGLA-N 366

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             T  TL+   C+  ++ EA +L  E+  +G      +Y  +I G C+   ++ A +V +
Sbjct: 367 VFTFNTLLSWLCKEGKMNEACNLWDEVIAKGISPNVVSYNNIILGHCRKDNINAACKVYK 426

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            M+ + + P+   F+ ++      G  E A+ ++ ++ +  +    TTL
Sbjct: 427 EMLDNGFTPNAVTFTILMDGYFKKGDIENAFSIFHRMKDANILPTDTTL 475



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 49/185 (26%), Positives = 86/185 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D K    ++  FC R  +  A +L++ +      P+     ++I G   ++ +E+A  + 
Sbjct: 576 DIKAYGTLIDGFCKRRDMKSAHELLNELRGAGLSPNRFIYNSMITGFKNMNNVEEAIDLY 635

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV  G   D  TY  ++ GL K G++  A  +  EM   G  PD   +  ++  + + 
Sbjct: 636 KKMVNEGIPCDLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNK 695

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+F+ A    +D   K   P ++ Y  LI    K+  +  A  + D+M   G  PD +TY
Sbjct: 696 GQFENARKILEDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITY 755

Query: 296 NSLVN 300
           + LVN
Sbjct: 756 DILVN 760



 Score = 65.1 bits (157), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 43/132 (32%), Positives = 62/132 (46%), Gaps = 5/132 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D KT   ++      G+L  AS +   M  +  +PD      LI GL    + E A K+L
Sbjct: 646 DLKTYTSLIDGLLKSGRLLYASDIHTEMLSKGILPDDRAHTVLINGLCNKGQFENARKIL 705

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M     +P  + YN ++ G  K G ++ A  L DEM   G  PD ITY+ ++     N
Sbjct: 706 EDMNGKNMIPSVLIYNTLIAGHFKEGNLQEAFRLHDEMLDRGLVPDNITYDILV-----N 760

Query: 236 GKFKQAIGFWKD 247
           GKFK    F +D
Sbjct: 761 GKFKGDGNFSRD 772


>gi|413920478|gb|AFW60410.1| hypothetical protein ZEAMMB73_296337 [Zea mays]
          Length = 676

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/487 (25%), Positives = 216/487 (44%), Gaps = 39/487 (8%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D ++   ++   C  G+  +A  L+  M  +    D   C  ++R   R  R    +
Sbjct: 177 VRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVT 236

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M   G  P+ + Y+  + GLC+RG ++ A  +L+EM   G +P+V T+ +++  +
Sbjct: 237 DLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGL 296

Query: 233 FDNGKFKQAIGFWKDQLRKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
              G  ++A   +   ++     P + TYT++I   CK+  +ARA  +L  M  +G +P+
Sbjct: 297 CKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPN 356

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
             TY +L++  CK G +D A  ++N +   G  PN  TYN ++     +G      K+L 
Sbjct: 357 TNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLR 416

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV-------- 403
           +           TY ILI   CK G +  A++ F QM  K+C PDI TY T+        
Sbjct: 417 MATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYCQQR 476

Query: 404 ---------------------------LGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
                                      +   C+ G L  AL++   +    C P  ITY 
Sbjct: 477 QMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSITYG 536

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            LI  L K+  +E+A  L+  M++  + P D+T  TL + +CR D++  AV  L  + KR
Sbjct: 537 ALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLAYEYCRRDKITIAVSFLDRLDKR 596

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                  A   ++  L     +D A   L+ ++   Y  D   +++ +    +      A
Sbjct: 597 QQAHTADA---LVRKLSTVGNLDAASLFLKNVLDKHYAVDHATYTSFINSCYESNRYALA 653

Query: 557 YKLWQKL 563
            ++ +K+
Sbjct: 654 SEISEKI 660



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 115/417 (27%), Positives = 201/417 (48%), Gaps = 3/417 (0%)

Query: 131 GKLTDASKLIDIMARR--NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           G    A +  D MAR      PD      L+ G  R  R E+A  +L  M   G   D+ 
Sbjct: 158 GCFAHAREAFDGMARAAGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSA 217

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           T  ++V   C++G+ R+   L   MS  G  P+++ Y+  +  + + G  KQA    ++ 
Sbjct: 218 TCTVVVRAFCRQGRFRNVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEM 277

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEV-LDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
           + KG  P + T+T LI+ +CK   + RA  + L  +      P++ TY  ++   CK+GK
Sbjct: 278 VGKGLKPNVYTHTSLIDGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGK 337

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
              A +++  ++ +G+ PN+ TY TL+H     G +D   ++++ M      P ++TYN 
Sbjct: 338 LARAEMLLGRMVEQGLAPNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNA 397

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +I G CK G +  A        S+    D VTY  ++   CK+G +  AL L   +   S
Sbjct: 398 IIGGFCKKGKIQEAYKVLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKS 457

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C P + TY T+I    ++  ME++  L+ + +  G+ P   T+ ++I G+CR  ++  A+
Sbjct: 458 CHPDIHTYTTIIAMYCQQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSAL 517

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            + + + + G    +  Y  +I  LCK  +++ A  + E M+     P D    T+ 
Sbjct: 518 KVFERMVQHGCLPDSITYGALISSLCKESRLEEARALFETMLDKHLVPCDVTRVTLA 574



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 111/387 (28%), Positives = 189/387 (48%), Gaps = 2/387 (0%)

Query: 181 SGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           +GGV PD  ++  +V G C+ G+   A ALL  M   G   D  T   ++R     G+F+
Sbjct: 174 AGGVRPDHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFR 233

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
                ++     G PP ++ Y+  I+ +C++  + +A  VL++M  +G  P++ T+ SL+
Sbjct: 234 NVTDLFRRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLI 293

Query: 300 NFSCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +  CK G  + A  +   L+ S   +PN  TY  ++      G     + +L  M E   
Sbjct: 294 DGLCKIGWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGL 353

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P   TY  LI+G CK G  DRA    N+M  +   P+I TYN ++G  CK+G + EA +
Sbjct: 354 APNTNTYTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYK 413

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L +          +TY  LI    K+G +  A+ L+ QM E    PD  T+ T+I  +C
Sbjct: 414 VLRMATSQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAEKSCHPDIHTYTTIIAMYC 473

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  Q+E++  L  +    G       Y  +I G C+  K+  A++V E M+     PD  
Sbjct: 474 QQRQMEQSQQLFDKCLSIGLVPTKQTYTSMIAGYCRLGKLTSALKVFERMVQHGCLPDSI 533

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +  ++  +  +   EEA  L++ +++
Sbjct: 534 TYGALISSLCKESRLEEARALFETMLD 560



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 89/336 (26%), Positives = 168/336 (50%), Gaps = 4/336 (1%)

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG-IARAIEVLDDMA--IEGCSP 290
           + G+ ++A     +    G P  + T   ++    +  G  A A E  D MA    G  P
Sbjct: 120 EAGRLREAADMLLELRSHGLPLVVETANWVLRVGLRHPGCFAHAREAFDGMARAAGGVRP 179

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D  ++ +LV   C++G++++A  ++  + ++G   +S T   ++ +   +G +  V  + 
Sbjct: 180 DHRSFRALVLGCCREGRFEEADALLAAMWAQGFCLDSATCTVVVRAFCRQGRFRNVTDLF 239

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M+E    P +  Y+  I+GLC+ G V +A +   +MV K  +P++ T+ +++  LCK 
Sbjct: 240 RRMSEMGTPPNMVNYSAWIDGLCERGYVKQAFHVLEEMVGKGLKPNVYTHTSLIDGLCKI 299

Query: 411 GMLNEALQL-LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           G +  A +L L L+  SS  P + TY  +I G  K+G + +A +L G+M+E G++P+  T
Sbjct: 300 GWMERAFRLFLKLVKSSSYKPNVHTYTVMIGGYCKEGKLARAEMLLGRMVEQGLAPNTNT 359

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + TLI G C+    + A +L+ ++   G       Y  +I G CK  K+  A +VL +  
Sbjct: 360 YTTLIHGHCKGGSFDRAFELMNKMKLEGFLPNIYTYNAIIGGFCKKGKIQEAYKVLRMAT 419

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           S     D   ++ ++ +    G    A  L++++ E
Sbjct: 420 SQGLHLDKVTYTILITEHCKQGHITCALDLFKQMAE 455


>gi|225442663|ref|XP_002279821.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Vitis vinifera]
          Length = 725

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 197/381 (51%), Gaps = 1/381 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           +PDT+TY+ ++    K G+  SAI+L DEM  +G  P    Y TIL   F  G+ ++A+G
Sbjct: 227 LPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALG 286

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
             ++   KGC   + TYT LI+ V K   +  A  +  +M  EGC PD+V  N+L+N   
Sbjct: 287 LVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLG 346

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTV 362
           K G+  DA+ +   + S    PN +TYNT++ +L  S+          + M E    P+ 
Sbjct: 347 KAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSS 406

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FTY+ILI+G CK   V++A+    +M  K   P    Y +++ AL K      A +L   
Sbjct: 407 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE 466

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L  +        Y  +I  L K G + +A+ L+ +M + G +PD   +  L+ G  R   
Sbjct: 467 LRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGM 526

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
            +EA  LL+ + + G     +++ ++++G  ++     AI++   M +S+ KPD   ++T
Sbjct: 527 TDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNT 586

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++  ++  GM EEA KL +++
Sbjct: 587 VLGCLSRAGMFEEAAKLMKEM 607



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 197/402 (49%), Gaps = 5/402 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  F   G+   A  L D M      P       ++    ++ R+EKA  ++
Sbjct: 229 DTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLV 288

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M   G      TY  ++ G+ K G++  A ++   M   GC+PDV+  N ++  +   
Sbjct: 289 QEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKA 348

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL---DDMAIEGCSPDI 292
           G+   AI  +++     C P ++TY  +I+ + +    ARA E     + M   G  P  
Sbjct: 349 GRLADAIKLFEEMESLQCTPNVVTYNTVIKALFES--KARASEAFLWYEKMKENGVVPSS 406

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY+ L++  CK  + + A+L++  +  +G  P    Y +L+++LG    ++A +++   
Sbjct: 407 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE 466

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + E     +   Y ++I  L K G +  A++ FN+M    C PD+  YN ++  + + GM
Sbjct: 467 LRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGM 526

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            +EA  LL  +  + C+P L ++N +++G A+ G  + A+ ++ +M  + I PD +++ T
Sbjct: 527 TDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNT 586

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           ++    RA   EEA  L+KE+  +G +     Y  ++  + K
Sbjct: 587 VLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 180/366 (49%), Gaps = 1/366 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           K    IL  +   G++  A  L+  M  +      +    LI+G+ +  ++E+A  +   
Sbjct: 266 KIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMN 325

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G  PD +  N ++  L K G++  AI L +EM    C P+V+TYNT+++ +F++  
Sbjct: 326 MLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKA 385

Query: 238 FKQAIGFWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
                  W +++++ G  P   TY+ILI+  CK   + +A+ +L++M  +G +P    Y 
Sbjct: 386 RASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYC 445

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL+N   K  +Y+ A  +   L       ++  Y  ++  LG  G       + + M + 
Sbjct: 446 SLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKL 505

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             +P V+ YN L++G+ + G+ D A +    M    C PD+ ++N +L    + G    A
Sbjct: 506 GCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGA 565

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           +++   +  S   P +++YNT++  L++ G  E+A  L  +M   G   D IT+ +++  
Sbjct: 566 IEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEA 625

Query: 477 FCRADQ 482
             + D+
Sbjct: 626 VGKIDE 631



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 192/423 (45%), Gaps = 2/423 (0%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
           RRN   D    + LI  L     + +  K +Q MV S  V      + +V  L K   + 
Sbjct: 117 RRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVN 176

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG-CPPYLITYTIL 263
            A+++  ++    C+P   TYN+++  +   G  ++    + +   +G C P  +TY+ L
Sbjct: 177 KALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSAL 236

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I    K      AI + D+M   G  P    Y +++    K G+ + A+ ++  +  +G 
Sbjct: 237 IAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGC 296

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
                TY  L+  +G  G  +    I   M +    P V   N LIN L K G +  AI 
Sbjct: 297 ALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIK 356

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
            F +M S  C P++VTYNTV+ AL + +   +EA      +  +   P   TY+ LIDG 
Sbjct: 357 LFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGF 416

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K   +EKA++L  +M E G +P    + +LI    +A + E A +L +E+ +       
Sbjct: 417 CKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSA 476

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y ++I  L K  ++  A+ +   M      PD   ++ ++  +   GMT+EA+ L + 
Sbjct: 477 RVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRT 536

Query: 563 LIE 565
           + E
Sbjct: 537 MEE 539


>gi|297850744|ref|XP_002893253.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297339095|gb|EFH69512.1| hypothetical protein ARALYDRAFT_313173 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1147

 Score =  193 bits (490), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/442 (27%), Positives = 215/442 (48%), Gaps = 11/442 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           +E  E T N ++  F   GK+ +A +    M +R+  P   +  N LI G  +    ++A
Sbjct: 305 IEFSEVTYNILINGFSKSGKMEEARRFHGDM-QRSGFPVTPYSFNPLIEGYCKQGLFDEA 363

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             V   M+ +G  P T TYN+ +  LC+ G+I  A  LL  M+     PDV++YNT++  
Sbjct: 364 WGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARELLSSMAA----PDVVSYNTLMHG 419

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
                KF +A   + D       P ++TY  LI+ +C+   +  A  + ++M  +   PD
Sbjct: 420 YIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLCESGNLEGAQRLKEEMTSQLIYPD 479

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL- 350
           ++TY +L+    K G    A  + + +L +G++P+   Y T   ++G     D+      
Sbjct: 480 VITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGYAYTT--RTVGELRLGDSEKAFRL 537

Query: 351 --DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
             +++ E  H+P +  YN+ I+GLCK G +++AI    ++      PD VTY TV+    
Sbjct: 538 HEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRKIFRVGLVPDHVTYTTVIRGYL 597

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           ++G    A  L   +     SP +ITY  LI G AK G +E+A     +M + G+ P+ +
Sbjct: 598 EKGRFKMARDLYDEMLSKRLSPSVITYFVLIHGHAKAGRLEQAFQYSTEMKKRGVRPNVM 657

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           TH  L+ G C+A  ++EA   L ++ + G      +Y ++I   C   K +  +++ + M
Sbjct: 658 THNALLHGMCKAGNIDEAYRYLCKMEEEGISPNKYSYTILISKHCDLDKWEEVVKLYKEM 717

Query: 529 ISSRYKPDDTVFSTIVKKVADD 550
           +    +PD      + K +  D
Sbjct: 718 LDKEIEPDGYTHRALFKHLEKD 739



 Score =  185 bits (470), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 127/461 (27%), Positives = 217/461 (47%), Gaps = 7/461 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N +L +    G L    K+   M RRN +  +  + I LI G  +  ++E+A +    
Sbjct: 276 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNI-LINGFSKSGKMEEARRFHGD 334

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  SG      ++N ++ G CK+G    A  + DEM  +G  P   TYN  +R + + G+
Sbjct: 335 MQRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGR 394

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A    ++ L     P +++Y  L+    K      A  + DD+     +P IVTYN+
Sbjct: 395 IDDA----RELLSSMAAPDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNT 450

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++  C+ G  + A  +   + S+ + P+ ITY TLL      G      +I D M    
Sbjct: 451 LIDGLCESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKG 510

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ-PDIVTYNTVLGALCKEGMLNEA 416
             P  + Y     G  + G  ++A     +MV+++   PD+  YN  +  LCK G L +A
Sbjct: 511 IKPDGYAYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKA 570

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           ++    +      P  +TY T+I G  +KG  + A  LY +M+   +SP  IT+  LI G
Sbjct: 571 IEFQRKIFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEMLSKRLSPSVITYFVLIHG 630

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             +A ++E+A     E+ KRG +     +  ++HG+CK+  +D A + L  M      P+
Sbjct: 631 HAKAGRLEQAFQYSTEMKKRGVRPNVMTHNALLHGMCKAGNIDEAYRYLCKMEEEGISPN 690

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
              ++ ++ K  D    EE  KL++++++ ++   G T  A
Sbjct: 691 KYSYTILISKHCDLDKWEEVVKLYKEMLDKEIEPDGYTHRA 731



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 111/397 (27%), Positives = 185/397 (46%), Gaps = 5/397 (1%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           EK     + M+  G +P     N+++  L     +  A  + + M + G  P VIT+NT+
Sbjct: 221 EKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVITFNTM 280

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L + F  G  ++    W +  R+      +TY ILI    K   +  A     DM   G 
Sbjct: 281 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDMQRSGF 340

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
                ++N L+   CKQG +D+A  V + +L+ G+ P + TYN  + +L   G  D   +
Sbjct: 341 PVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRIDDARE 400

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M     +P V +YN L++G  K      A   F+ + + N  P IVTYNT++  LC
Sbjct: 401 LLSSMA----APDVVSYNTLMHGYIKMRKFVEASLLFDDLKAGNINPSIVTYNTLIDGLC 456

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           + G L  A +L   +      P +ITY TL+ G  K G +  A  +Y +M+  GI PD  
Sbjct: 457 ESGNLEGAQRLKEEMTSQLIYPDVITYTTLLKGFVKNGNLSMATEIYDEMLRKGIKPDGY 516

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKSKKVDMAIQVLEL 527
            + T   G  R    E+A  L +E+    +   + + Y + I GLCK   ++ AI+    
Sbjct: 517 AYTTRTVGELRLGDSEKAFRLHEEMVAEDHHAPDLTIYNVRIDGLCKVGNLEKAIEFQRK 576

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +      PD   ++T+++   + G  + A  L+ +++
Sbjct: 577 IFRVGLVPDHVTYTTVIRGYLEKGRFKMARDLYDEML 613



 Score = 78.6 bits (192), Expect = 9e-12,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 94/186 (50%)

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K  + ++ + SF +M+ K   P +   N VL  L    M+N+A ++   +      P +I
Sbjct: 216 KKSMAEKCLLSFEKMIRKGFLPSVRNCNIVLRVLRDSRMMNKAQEVYETMVMHGIMPTVI 275

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           T+NT++D   K G +E+   ++ +M    I   ++T+  LI GF ++ ++EEA     ++
Sbjct: 276 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKSGKMEEARRFHGDM 335

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            + G  +   ++  +I G CK    D A  V + M+++   P  + ++  ++ + + G  
Sbjct: 336 QRSGFPVTPYSFNPLIEGYCKQGLFDEAWGVTDEMLNAGIYPTTSTYNIYIRALCEFGRI 395

Query: 554 EEAYKL 559
           ++A +L
Sbjct: 396 DDAREL 401


>gi|18071401|gb|AAL58260.1|AC068923_2 putative membrane-associated protein [Oryza sativa Japonica Group]
          Length = 627

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 187/356 (52%), Gaps = 9/356 (2%)

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDNGKFKQ 240
           G+PD  +YN+++ GLC   + + A+ LL  M+  G  C PDV++Y+T++     NG FK+
Sbjct: 47  GIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVI-----NGFFKE 101

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
             G     L +   P ++TY  +I  +CK   + +A+EVL  M   G  PD +TYNS+V+
Sbjct: 102 --GDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVH 159

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G+  +A++ +  + S G+EP+ +TYN+L+  L   G      KI D M +    P
Sbjct: 160 GFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP 219

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TY  L+ G    G +       + MV     P+   ++ ++ A  K+  + EA+ + 
Sbjct: 220 DITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF 279

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +     +P  +TY T+ID L K G +E AM+ + QM++ G+ PD I + +LI   C  
Sbjct: 280 SKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIF 339

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           D+ E+A +L  E+  RG  +    +  +I   CK  +V  + ++ +LM+    KPD
Sbjct: 340 DKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 131/485 (27%), Positives = 221/485 (45%), Gaps = 68/485 (14%)

Query: 135 DASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGG--VPDTITYN 191
           DA  + D + RR  IPD F + I L+ GL   +R ++A ++L IM   GG   PD ++Y+
Sbjct: 35  DARHVFDELLRRG-IPDVFSYNI-LLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYS 92

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            ++ G  K G        LD+M      P+V+TYN+I+  +       +A+      ++ 
Sbjct: 93  TVINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKS 145

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P  +TY  ++   C       AI  L  M  +G  PD+VTYNSL+++ CK G+  +A
Sbjct: 146 GVMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEA 205

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             + +++  RG++P+  TY TLL    ++G    +  +LD+M      P  + ++IL+  
Sbjct: 206 RKIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCA 265

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
             K   V+ A+  F++M  +   P+ VTY TV+  LCK G + +A+     +      P 
Sbjct: 266 YAKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPD 325

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA---VD 488
            I YN+LI  L      EKA  L+ +M++ GI    I   ++I   C+  +V E+    D
Sbjct: 326 SIVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFD 385

Query: 489 LLKEIGKR----------------------------------------------GNKMRN 502
           L+  IG +                                              GN   N
Sbjct: 386 LMVRIGVKPDIITLGRFLGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASN 445

Query: 503 SA-------YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           S+       Y +++HGLCK+K  D A+++ + +     K +   F+ ++  +   G  +E
Sbjct: 446 SSGGPFLGTYNIILHGLCKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDE 505

Query: 556 AYKLW 560
           A  L+
Sbjct: 506 AKDLF 510



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 171/323 (52%), Gaps = 10/323 (3%)

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFS 302
           + + LR+G P  + +Y IL+  +C +     A+E+L  MA +G  C PD+V+Y++++N  
Sbjct: 40  FDELLRRGIPD-VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF 98

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+G  D        +L + + PN +TYN+++ +L      D   ++L  M ++   P  
Sbjct: 99  FKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDC 151

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN +++G C  G    AI    +M S   +PD+VTYN+++  LCK G   EA ++   
Sbjct: 152 MTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS 211

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P + TY TL+ G A KG + +   L   M+ NGI P+      L+  + + ++
Sbjct: 212 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 271

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEEA+ +  ++ ++G       Y  VI  LCKS +V+ A+   E MI    +PD  V+++
Sbjct: 272 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 331

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++  +      E+A +L+ ++++
Sbjct: 332 LIHSLCIFDKWEKAEELFLEMLD 354



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 135/547 (24%), Positives = 236/547 (43%), Gaps = 70/547 (12%)

Query: 84  VLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKL 139
           V + N  L GL    +S +      + + DG     D  + + ++  F   G L      
Sbjct: 51  VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL------ 104

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK 199
            D M  +   P+     ++I  L +   ++KA +VL  MV SG +PD +TYN +V G C 
Sbjct: 105 -DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
            GQ + AI  L +M   G EPDV+TYN+++  +  NG+  +A   +    ++G  P + T
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223

Query: 260 Y-----------------------------------TILIEQVCKQCGIARAIEVLDDMA 284
           Y                                   +IL+    KQ  +  A+ V   M 
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +G +P+ VTY ++++  CK G+ +DA+L    ++  G+ P+SI YN+L+HSL     W+
Sbjct: 284 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWE 343

Query: 345 AVDKI-LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
             +++ L++++      T+F +N +I+  CK G V  +   F+ MV    +PDI+T    
Sbjct: 344 KAEELFLEMLDRGICLSTIF-FNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRF 402

Query: 404 LGALCKEGMLNEALQLLHL---------------LNG------SSCSPCLITYNTLIDGL 442
           LG+  ++  L   +  +                  NG      SS  P L TYN ++ GL
Sbjct: 403 LGSARRDYSLFVNIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGL 462

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K    + A+ ++  +    +  +  T   +I    +  + +EA DL       G     
Sbjct: 463 CKNKLTDDALRMFQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNY 522

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             YRL+   +     ++   Q+   M  +    D  + + IV+++   G    A   +  
Sbjct: 523 WTYRLMAENIIGQGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRA-GTYLS 581

Query: 563 LIEWKVF 569
           +I+ K F
Sbjct: 582 MIDEKHF 588



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 182/365 (49%), Gaps = 10/365 (2%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTIL 263
           A  + DE+   G  PDV +YN +L  + D  + ++A+         G  CPP +++Y+ +
Sbjct: 36  ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I    K+         LD M  +  SP++VTYNS++   CK    D A+ V+  ++  G+
Sbjct: 95  INGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 147

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ +TYN+++H   S G        L  M      P V TYN L++ LCK G    A  
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F+ M  +  +PDI TY T+L     +G L E   LL L+  +   P    ++ L+   A
Sbjct: 208 IFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 267

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K+  +E+AM+++ +M + G++P+ +T+ T+I   C++ +VE+A+   +++   G +  + 
Sbjct: 268 KQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSI 327

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +IH LC   K + A ++   M+          F++I+     +G   E+ KL+  +
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387

Query: 564 IEWKV 568
           +   V
Sbjct: 388 VRIGV 392



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 108/450 (24%), Positives = 204/450 (45%), Gaps = 32/450 (7%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           SDG  VE D  T N ++   C  G+ T+A K+ D M +R   PD      L++G      
Sbjct: 179 SDG--VEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITTYGTLLQGYATKGA 236

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + +   +L +MV +G  P+   ++++V    K+ ++  A+ +  +M   G  P+ +TY T
Sbjct: 237 LVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMRQQGLNPNAVTYGT 296

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++  +  +G+ + A+ +++  + +G  P  I Y  LI  +C      +A E+  +M   G
Sbjct: 297 VIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWEKAEELFLEMLDRG 356

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
                + +NS+++  CK+G+  ++  + + ++  G++P+ IT    L S  +R  +    
Sbjct: 357 ICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIITLGRFLGS--ARRDYSLFV 414

Query: 348 KILDIM--------------------NEASHS---PTVFTYNILINGLCKYGLVDRAINS 384
            I  I                     N AS+S   P + TYNI+++GLCK  L D A+  
Sbjct: 415 NIYFIFTNMSNTGDKEKETPVNTNGGNTASNSSGGPFLGTYNIILHGLCKNKLTDDALRM 474

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F  +   + + +  T+N ++ AL K G  +EA  L    + +   P   TY  + + +  
Sbjct: 475 FQNLCLMDLKLEARTFNIMIDALLKVGRNDEAKDLFVAFSSNGLVPNYWTYRLMAENIIG 534

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           +G +E+   L+  M +NG + D      ++    +  ++  A   L  I ++   +  S 
Sbjct: 535 QGLLEELDQLFLSMEDNGCTVDSGMLNFIVRELLQRGEITRAGTYLSMIDEKHFSLEAST 594

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             L I  L   K      Q   + +  +YK
Sbjct: 595 ASLFIDLLSGGK-----YQEYHIFLPEKYK 619


>gi|218200855|gb|EEC83282.1| hypothetical protein OsI_28637 [Oryza sativa Indica Group]
          Length = 662

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/469 (26%), Positives = 220/469 (46%), Gaps = 28/469 (5%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G++ +A +L   M +    P       LI GL R +R  +   VLQ M
Sbjct: 48  TYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEM 107

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ + YN ++G  C++G    A+ L DEM +   +P  +TYN I + +   G+ 
Sbjct: 108 EQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEM 167

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG-IARAIEVLDDMAIEGCSPDIVTYNS 297
           ++A    +D L  G   +   +  ++  + ++   +   + + ++M   G  P+     +
Sbjct: 168 ERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTA 227

Query: 298 LVNFSCKQGKYDDAV-----------------LVINNLLSRGMEPNSITYNTLLHSLGSR 340
            +   CK GK+ +AV                  VI  +L++G+E +SITYN ++     R
Sbjct: 228 CMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIELDSITYNIMI-----R 282

Query: 341 GC-----WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
           GC      +   K+   M      P +FT+N L++  C  G ++   +  +QM ++  QP
Sbjct: 283 GCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQP 342

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           DIV+Y T++   CK   + +A + L  L      P +  YN LI G  + G +  A+   
Sbjct: 343 DIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAV 402

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
             M  NGI P ++T+ +L++  C A  VEEA  +  +  +    +    Y ++I G CK 
Sbjct: 403 ETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKL 462

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            K+  A+   E M S    P+   ++T++   +  G +EEA KL+ +++
Sbjct: 463 GKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMV 511



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 201/428 (46%), Gaps = 22/428 (5%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+ L +  +++   ++L  +  +G  P  +TYN+++  LCK G++  A  L   M   G
Sbjct: 17  MIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGG 76

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P V+T+  ++  +    +F +     ++  + G  P  + Y  LI   C++   ++A+
Sbjct: 77  MTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQAL 136

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + D+M ++   P  VTYN +    CK+G+ + A  ++ ++LS GM  +   +NT++  L
Sbjct: 137 RLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWL 196

Query: 338 GSRGCWDAVDKILDIMNEA---SHSPTVFTYNILINGLCKYG-----------------L 377
             R     ++ ++ I NE       P        +  LCK G                  
Sbjct: 197 LQRT--RRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKY 254

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +  A      M++K  + D +TYN ++   CK+  + EA++L   +      P L T+NT
Sbjct: 255 MKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNT 314

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           L+      G ME+   L  QM   G+ PD +++ T+I G C+A  + +A + L E+  RG
Sbjct: 315 LLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRG 374

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K     Y  +I G  ++  +  AI  +E M S+  +P +  + +++  +   G+ EEA 
Sbjct: 375 LKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAK 434

Query: 558 KLWQKLIE 565
            ++ +  E
Sbjct: 435 TIFSQARE 442



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 166/374 (44%), Gaps = 18/374 (4%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI-RIDRIEKASKVLQI 177
           T N I +  C  G++  A ++++ M              ++  L+ R  R+E    +   
Sbjct: 153 TYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNE 212

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL-----------------LDEMSVSGCEP 220
           MV  G  P+       +  LCK G+ + A+ +                 +  M   G E 
Sbjct: 213 MVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGKYMKEATKVIQTMLNKGIEL 272

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D ITYN ++R    + K ++AI    D  R+G  P L T+  L+   C    +     +L
Sbjct: 273 DSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLL 332

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           D M  EG  PDIV+Y ++++  CK      A   +  L+ RG++PN   YN L+   G  
Sbjct: 333 DQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRN 392

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G        ++ M      PT  TY  L+  +C  GLV+ A   F+Q    N    ++ Y
Sbjct: 393 GDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGY 452

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
             ++   CK G + EA+     +     SP  +TY TL+   +K G  E+A  L+ +M+ 
Sbjct: 453 TIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVG 512

Query: 461 NGISPDDITHRTLI 474
           +G+ PD+IT+ TLI
Sbjct: 513 SGVIPDNITYGTLI 526



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 87/279 (31%), Positives = 147/279 (52%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           +++A+KV+Q M+  G   D+ITYN+M+ G CK  ++  AI L  +M+  G +PD+ T+NT
Sbjct: 255 MKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNT 314

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           +L    + GK ++          +G  P +++Y  +I+  CK   I +A E L ++   G
Sbjct: 315 LLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRG 374

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             P++  YN+L+    + G    A+  +  + S G++P ++TY +L++ +   G  +   
Sbjct: 375 LKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAK 434

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            I     E +    V  Y I+I G CK G +  A+  F +M S+   P+ +TY T++ A 
Sbjct: 435 TIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAY 494

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            K G   EA +L   + GS   P  ITY TLI   ++KG
Sbjct: 495 SKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEKG 533



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 85/323 (26%), Positives = 156/323 (48%), Gaps = 18/323 (5%)

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           +YT +I+ +CK   +    E+L ++   G  P +VTYN L++  CK G+ ++A  +   +
Sbjct: 13  SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 72

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
              GM P+ +T+  L++ L     +  V  +L  M +   SP    YN LI   C+ G  
Sbjct: 73  EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 132

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
            +A+  F++MV K  +P  VTYN +  ALCKEG +  A ++L  +     +     +NT+
Sbjct: 133 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 192

Query: 439 IDGLAKKG-CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +  L ++   +E  + +  +M+  G+ P+D      +   C+  + +EAV +  +   +G
Sbjct: 193 VAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKG 252

Query: 498 NKMRNS-----------------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             M+ +                  Y ++I G CK  K++ AI++   M    +KPD   F
Sbjct: 253 KYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTF 312

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           +T++    + G  EE + L  ++
Sbjct: 313 NTLLHAYCNLGKMEETFHLLDQM 335



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 54/182 (29%), Positives = 95/182 (52%)

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           ++Y  +I  LCK G VD       ++     QP +VTYN ++ ALCK G + EA +L   
Sbjct: 12  YSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGR 71

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +     +P ++T+  LI+GLA+     +  ++  +M + G+SP+++ +  LI   CR   
Sbjct: 72  MEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGH 131

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
             +A+ L  E+  +  K     Y L+   LCK  +++ A ++LE M+S        +F+T
Sbjct: 132 CSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNT 191

Query: 543 IV 544
           +V
Sbjct: 192 VV 193



 Score = 98.2 bits (243), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 60/256 (23%), Positives = 123/256 (48%), Gaps = 1/256 (0%)

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
           SR +  N  +Y  ++ +L   G  DA  ++L  +  A   PTV TYN+L++ LCK G V+
Sbjct: 4   SRNVALNEYSYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVE 63

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A     +M      P +VT+  ++  L +     E   +L  +     SP  + YN LI
Sbjct: 64  EAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELI 123

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
               +KG   +A+ L+ +M+   + P  +T+  +    C+  ++E A  +L+++   G  
Sbjct: 124 GWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMT 183

Query: 500 MRNSAYRLVIHGLC-KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           +    +  V+  L  ++++++  + +   M++   +P+D + +  ++++   G  +EA  
Sbjct: 184 VHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVG 243

Query: 559 LWQKLIEWKVFEKGTT 574
           +W K +    + K  T
Sbjct: 244 IWFKTLNKGKYMKEAT 259



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 34/152 (22%), Positives = 67/152 (44%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +   G ++ A   ++ M      P      +L+  +     +E+A  +      
Sbjct: 383 NALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARE 442

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +      I Y +M+ G CK G++  A+A  +EM   G  P+ +TY T++     +G  ++
Sbjct: 443 NNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEE 502

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           A   + + +  G  P  ITY  LI +  ++ G
Sbjct: 503 ASKLFDEMVGSGVIPDNITYGTLIARCSEKGG 534


>gi|41152692|dbj|BAD08216.1| hypothetical protein [Oryza sativa Japonica Group]
          Length = 401

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 111/356 (31%), Positives = 187/356 (52%), Gaps = 9/356 (2%)

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVITYNTILRTMFDNGKFKQ 240
           G+PD  +YN+++ GLC   + + A+ LL  M+  G  C PDV++Y+T++     NG FK+
Sbjct: 47  GIPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVI-----NGFFKE 101

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
             G     L +   P ++TY  +I  +CK   + +A+EVL  M   G  PD +TYNS+V+
Sbjct: 102 --GDLDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVH 159

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G+  +A++ +  + S G+EP+ +TYN+L+  L   G      KI D M +    P
Sbjct: 160 GFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKP 219

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TY  L+ G    G +       + MV     P+   ++ ++ A  K+  + EA+ + 
Sbjct: 220 DITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVF 279

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +     +P  +TY T+ID L K G +E AM+ + QM++ G+ PD I + +LI   C  
Sbjct: 280 SKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIF 339

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           D+ E+A +L  E+  RG  +    +  +I   CK  +V  + ++ +LM+    KPD
Sbjct: 340 DKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPD 395



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 110/365 (30%), Positives = 181/365 (49%), Gaps = 13/365 (3%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG--VPDTITYNM 192
           DA  + D + RR  IPD      L+ GL   +R ++A ++L IM   GG   PD ++Y+ 
Sbjct: 35  DARHVFDELLRRG-IPDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYST 93

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++ G  K G        LD+M      P+V+TYN+I+  +       +A+      ++ G
Sbjct: 94  VINGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSG 146

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P  +TY  ++   C       AI  L  M  +G  PD+VTYNSL+++ CK G+  +A 
Sbjct: 147 VMPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEAR 206

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            + +++  RG++P+  TY TLL    ++G    +  +LD+M      P  + ++IL+   
Sbjct: 207 KIFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAY 266

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
            K   V+ A+  F++M  +   P+ VTY TV+  LCK G + +A+     +      P  
Sbjct: 267 AKQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDS 326

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA---VDL 489
           I YN+LI  L      EKA  L+ +M++ GI    I   ++I   C+  +V E+    DL
Sbjct: 327 IVYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDL 386

Query: 490 LKEIG 494
           +  IG
Sbjct: 387 MVRIG 391



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 95/323 (29%), Positives = 171/323 (52%), Gaps = 10/323 (3%)

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFS 302
           + + LR+G P  + +Y IL+  +C +     A+E+L  MA +G  C PD+V+Y++++N  
Sbjct: 40  FDELLRRGIPD-VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGF 98

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+G  D        +L + + PN +TYN+++ +L      D   ++L  M ++   P  
Sbjct: 99  FKEGDLD-------KMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDC 151

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYN +++G C  G    AI    +M S   +PD+VTYN+++  LCK G   EA ++   
Sbjct: 152 MTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDS 211

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P + TY TL+ G A KG + +   L   M+ NGI P+      L+  + + ++
Sbjct: 212 MTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEK 271

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           VEEA+ +  ++ ++G       Y  VI  LCKS +V+ A+   E MI    +PD  V+++
Sbjct: 272 VEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNS 331

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++  +      E+A +L+ ++++
Sbjct: 332 LIHSLCIFDKWEKAEELFLEMLD 354



 Score =  158 bits (399), Expect = 9e-36,   Method: Compositional matrix adjust.
 Identities = 103/365 (28%), Positives = 182/365 (49%), Gaps = 10/365 (2%)

Query: 206 AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTIL 263
           A  + DE+   G  PDV +YN +L  + D  + ++A+         G  CPP +++Y+ +
Sbjct: 36  ARHVFDELLRRGI-PDVFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTV 94

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I    K+         LD M  +  SP++VTYNS++   CK    D A+ V+  ++  G+
Sbjct: 95  INGFFKEGD-------LDKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGV 147

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ +TYN+++H   S G        L  M      P V TYN L++ LCK G    A  
Sbjct: 148 MPDCMTYNSIVHGFCSSGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARK 207

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F+ M  +  +PDI TY T+L     +G L E   LL L+  +   P    ++ L+   A
Sbjct: 208 IFDSMTKRGLKPDITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYA 267

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K+  +E+AM+++ +M + G++P+ +T+ T+I   C++ +VE+A+   +++   G +  + 
Sbjct: 268 KQEKVEEAMLVFSKMRQQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSI 327

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            Y  +IH LC   K + A ++   M+          F++I+     +G   E+ KL+  +
Sbjct: 328 VYNSLIHSLCIFDKWEKAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLM 387

Query: 564 IEWKV 568
           +   V
Sbjct: 388 VRIGV 392



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 98/355 (27%), Positives = 171/355 (48%), Gaps = 11/355 (3%)

Query: 84  VLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKL 139
           V + N  L GL    +S +      + + DG     D  + + ++  F   G L      
Sbjct: 51  VFSYNILLNGLCDENRSQEALELLHIMADDGGDCPPDVVSYSTVINGFFKEGDL------ 104

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK 199
            D M  +   P+     ++I  L +   ++KA +VL  MV SG +PD +TYN +V G C 
Sbjct: 105 -DKMLDQRISPNVVTYNSIIAALCKAQTVDKAMEVLTTMVKSGVMPDCMTYNSIVHGFCS 163

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
            GQ + AI  L +M   G EPDV+TYN+++  +  NG+  +A   +    ++G  P + T
Sbjct: 164 SGQPKEAIVFLKKMRSDGVEPDVVTYNSLMDYLCKNGRCTEARKIFDSMTKRGLKPDITT 223

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           Y  L++    +  +     +LD M   G  P+   ++ LV    KQ K ++A+LV + + 
Sbjct: 224 YGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILVCAYAKQEKVEEAMLVFSKMR 283

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            +G+ PN++TY T++  L   G  +      + M +    P    YN LI+ LC +   +
Sbjct: 284 QQGLNPNAVTYGTVIDVLCKSGRVEDAMLYFEQMIDEGLRPDSIVYNSLIHSLCIFDKWE 343

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
           +A   F +M+ +      + +N+++ + CKEG + E+ +L  L+      P +IT
Sbjct: 344 KAEELFLEMLDRGICLSTIFFNSIIDSHCKEGRVIESGKLFDLMVRIGVKPDIIT 398


>gi|297743291|emb|CBI36158.3| unnamed protein product [Vitis vinifera]
          Length = 638

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 117/381 (30%), Positives = 197/381 (51%), Gaps = 1/381 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           +PDT+TY+ ++    K G+  SAI+L DEM  +G  P    Y TIL   F  G+ ++A+G
Sbjct: 227 LPDTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALG 286

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
             ++   KGC   + TYT LI+ V K   +  A  +  +M  EGC PD+V  N+L+N   
Sbjct: 287 LVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLG 346

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTV 362
           K G+  DA+ +   + S    PN +TYNT++ +L  S+          + M E    P+ 
Sbjct: 347 KAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSS 406

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FTY+ILI+G CK   V++A+    +M  K   P    Y +++ AL K      A +L   
Sbjct: 407 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE 466

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L  +        Y  +I  L K G + +A+ L+ +M + G +PD   +  L+ G  R   
Sbjct: 467 LRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGM 526

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
            +EA  LL+ + + G     +++ ++++G  ++     AI++   M +S+ KPD   ++T
Sbjct: 527 TDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNT 586

Query: 543 IVKKVADDGMTEEAYKLWQKL 563
           ++  ++  GM EEA KL +++
Sbjct: 587 VLGCLSRAGMFEEAAKLMKEM 607



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 103/402 (25%), Positives = 197/402 (49%), Gaps = 5/402 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  F   G+   A  L D M      P       ++    ++ R+EKA  ++
Sbjct: 229 DTVTYSALIAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLV 288

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M   G      TY  ++ G+ K G++  A ++   M   GC+PDV+  N ++  +   
Sbjct: 289 QEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKA 348

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL---DDMAIEGCSPDI 292
           G+   AI  +++     C P ++TY  +I+ + +    ARA E     + M   G  P  
Sbjct: 349 GRLADAIKLFEEMESLQCTPNVVTYNTVIKALFES--KARASEAFLWYEKMKENGVVPSS 406

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY+ L++  CK  + + A+L++  +  +G  P    Y +L+++LG    ++A +++   
Sbjct: 407 FTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQE 466

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + E     +   Y ++I  L K G +  A++ FN+M    C PD+  YN ++  + + GM
Sbjct: 467 LRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGM 526

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            +EA  LL  +  + C+P L ++N +++G A+ G  + A+ ++ +M  + I PD +++ T
Sbjct: 527 TDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGAIEMFTRMKNSKIKPDVVSYNT 586

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           ++    RA   EEA  L+KE+  +G +     Y  ++  + K
Sbjct: 587 VLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEAVGK 628



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 94/366 (25%), Positives = 180/366 (49%), Gaps = 1/366 (0%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           K    IL  +   G++  A  L+  M  +      +    LI+G+ +  ++E+A  +   
Sbjct: 266 KIYTTILGIYFKLGRVEKALGLVQEMKEKGCALTVYTYTELIKGVGKAGKVEEAYSIFMN 325

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G  PD +  N ++  L K G++  AI L +EM    C P+V+TYNT+++ +F++  
Sbjct: 326 MLKEGCKPDVVLINNLINLLGKAGRLADAIKLFEEMESLQCTPNVVTYNTVIKALFESKA 385

Query: 238 FKQAIGFWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
                  W +++++ G  P   TY+ILI+  CK   + +A+ +L++M  +G +P    Y 
Sbjct: 386 RASEAFLWYEKMKENGVVPSSFTYSILIDGFCKTNRVEKALLLLEEMDEKGFAPCPAAYC 445

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL+N   K  +Y+ A  +   L       ++  Y  ++  LG  G       + + M + 
Sbjct: 446 SLINALGKAKRYEAANELFQELRENCGYSSARVYAVMIKHLGKCGRLSEAVDLFNEMKKL 505

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             +P V+ YN L++G+ + G+ D A +    M    C PD+ ++N +L    + G    A
Sbjct: 506 GCNPDVYAYNALMSGMVRVGMTDEAHSLLRTMEENGCTPDLNSHNIILNGFARTGGPKGA 565

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           +++   +  S   P +++YNT++  L++ G  E+A  L  +M   G   D IT+ +++  
Sbjct: 566 IEMFTRMKNSKIKPDVVSYNTVLGCLSRAGMFEEAAKLMKEMNSKGFEYDLITYSSILEA 625

Query: 477 FCRADQ 482
             + D+
Sbjct: 626 VGKIDE 631



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 113/423 (26%), Positives = 192/423 (45%), Gaps = 2/423 (0%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
           RRN   D    + LI  L     + +  K +Q MV S  V      + +V  L K   + 
Sbjct: 117 RRNFEHDSTTYMALIHCLDEAGMLGEMWKTIQEMVRSTCVIGPADLSEIVKVLGKAKMVN 176

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG-CPPYLITYTIL 263
            A+++  ++    C+P   TYN+++  +   G  ++    + +   +G C P  +TY+ L
Sbjct: 177 KALSIFYQIKGRKCKPTSNTYNSMILMLMQEGHHEKVHELYNEMCNEGDCLPDTVTYSAL 236

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I    K      AI + D+M   G  P    Y +++    K G+ + A+ ++  +  +G 
Sbjct: 237 IAAFGKLGRDDSAISLFDEMKENGLHPTAKIYTTILGIYFKLGRVEKALGLVQEMKEKGC 296

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
                TY  L+  +G  G  +    I   M +    P V   N LIN L K G +  AI 
Sbjct: 297 ALTVYTYTELIKGVGKAGKVEEAYSIFMNMLKEGCKPDVVLINNLINLLGKAGRLADAIK 356

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
            F +M S  C P++VTYNTV+ AL + +   +EA      +  +   P   TY+ LIDG 
Sbjct: 357 LFEEMESLQCTPNVVTYNTVIKALFESKARASEAFLWYEKMKENGVVPSSFTYSILIDGF 416

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K   +EKA++L  +M E G +P    + +LI    +A + E A +L +E+ +       
Sbjct: 417 CKTNRVEKALLLLEEMDEKGFAPCPAAYCSLINALGKAKRYEAANELFQELRENCGYSSA 476

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y ++I  L K  ++  A+ +   M      PD   ++ ++  +   GMT+EA+ L + 
Sbjct: 477 RVYAVMIKHLGKCGRLSEAVDLFNEMKKLGCNPDVYAYNALMSGMVRVGMTDEAHSLLRT 536

Query: 563 LIE 565
           + E
Sbjct: 537 MEE 539


>gi|357115900|ref|XP_003559723.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like, partial [Brachypodium distachyon]
          Length = 907

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 132/473 (27%), Positives = 225/473 (47%), Gaps = 30/473 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L  FCSRG + DA KL  +M +R  +P+   C  L+ G  +  + E+A  + +  
Sbjct: 377 TYNTLLNGFCSRGAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKET 436

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   + +T N ++ GLCK  ++  A  L   M    C  D +TY T++      G  
Sbjct: 437 LARGLARNVVTINTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLIDGYCKLGDL 496

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQ--VCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
            +A     +    G  P +  +   I    + KQ G    I V  +M+ +G SP+ VTY 
Sbjct: 497 GRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIRV--EMSAKGLSPNTVTYG 554

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL------ 350
           +L+   CK+G   DA ++   ++ +G++PN    + L+      G  D  + +L      
Sbjct: 555 ALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYREGKVDEANLVLQKLADT 614

Query: 351 DIMNEAS--------------------HSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           D++ + S                    H      +NI+I GLCK G V  A N F  +  
Sbjct: 615 DMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCKLGRVADARNLFEDLKV 674

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           K   PD  TY++++      G ++ A  L   +  +  +P ++TYN+LI GL K   + +
Sbjct: 675 KGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVTYNSLIYGLCKSCNVSR 734

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+ L+ ++   GISP+ IT+ TLI G C+     EA  L +++ K G +     Y ++IH
Sbjct: 735 AVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMIKEGIQPTVFTYTILIH 794

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           GLC    ++ AI++L+ MI +   P+   + T+++  A  G  +   KL+ ++
Sbjct: 795 GLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMKAITKLYNEM 847



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 101/399 (25%), Positives = 195/399 (48%), Gaps = 5/399 (1%)

Query: 151 DFHFCIN----LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
           DF F       L+R      +++ A  V   M  +G      + N ++  L + G I +A
Sbjct: 89  DFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTA 148

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           +A+  +M  +G  PD  T   + +    +G+   A  F K+    G    L+ Y  +++ 
Sbjct: 149 VAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDG 208

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL-SRGMEP 325
            C+      A ++L  + ++G SP++VTY  LV   CK+G+ ++A  V+  +  +  +  
Sbjct: 209 YCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVI 268

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           + + Y  L++    RG  +  +++ D M +A     +F YN +ING CK G +       
Sbjct: 269 DEVAYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLL 328

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                +    D  +YNT++   C++G + +A +   ++  +  +   +TYNTL++G   +
Sbjct: 329 QANEYRGVNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSR 388

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
           G ++ A+ L+  M++ G+ P++I+  TL+ GF +A + E+A++L KE   RG        
Sbjct: 389 GAIDDALKLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTI 448

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
             VI+GLCK++++  A ++   M       D   + T++
Sbjct: 449 NTVINGLCKNRRMTEAEELFHRMKEWSCPCDSLTYRTLI 487



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 128/515 (24%), Positives = 216/515 (41%), Gaps = 73/515 (14%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L+     G+L DA  + D M +         C  L+  L++   I  A  V Q M  +G
Sbjct: 100 LLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQMRCAG 159

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD  T  +M    C+ G++  A   L EM   G + +++ Y+ ++      G+ + A 
Sbjct: 160 TLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQTEVAR 219

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-EGCSPDIVTYNSLVNF 301
                   KG  P ++TYT+L++  CK+  +  A +V+ ++   E    D V Y +L+N 
Sbjct: 220 KLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGALING 279

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL----------- 350
            C++G+ +DA  V + ++  G++ N   YNT+++     G    V+K+L           
Sbjct: 280 YCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRGVNLD 339

Query: 351 ------------------------DIMNEASHSPTVFTYNILINGLCKYGLVD------- 379
                                   D+M     + T  TYN L+NG C  G +D       
Sbjct: 340 EYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDALKLWF 399

Query: 380 ----------------------------RAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
                                       +A+N + + +++    ++VT NTV+  LCK  
Sbjct: 400 LMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGLCKNR 459

Query: 412 MLNEALQLLHLLNGSSCSPC-LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
            + EA +L H +   SC PC  +TY TLIDG  K G + +A  +  +M   G  P     
Sbjct: 460 RMTEAEELFHRMKEWSC-PCDSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMF 518

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            + I G   A Q  +  D+  E+  +G       Y  +I G CK   +  A  +   M+ 
Sbjct: 519 NSFITGLFIAKQSGKVNDIRVEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVE 578

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              KP+  + S +V     +G  +EA  + QKL +
Sbjct: 579 KGLKPNLFICSVLVSCFYREGKVDEANLVLQKLAD 613



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 90/379 (23%), Positives = 183/379 (48%), Gaps = 1/379 (0%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           ++++++      GQ++ A+ + DEM  +G    + + N +L  +   G    A+  ++  
Sbjct: 96  SFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVFQQM 155

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
              G  P   T  I+ +  C+   +A A + L +M   G   ++V Y+++++  C+ G+ 
Sbjct: 156 RCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRIGQT 215

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT-VFTYNI 367
           + A  ++++L  +G+ PN +TY  L+      G  +  +K++  + E          Y  
Sbjct: 216 EVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKENEKIVIDEVAYGA 275

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING C+ G ++ A    ++M+    Q ++  YNT++   CK G + E  +LL       
Sbjct: 276 LINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQANEYRG 335

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            +    +YNTL+DG  +KG M KA      M+ NG +   +T+ TL+ GFC    +++A+
Sbjct: 336 VNLDEYSYNTLVDGYCRKGFMTKAFETCDMMVRNGFTGTTLTYNTLLNGFCSRGAIDDAL 395

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L   + KRG      +   ++ G  K+ K + A+ + +  ++     +    +T++  +
Sbjct: 396 KLWFLMLKRGVVPNEISCSTLLDGFFKAGKTEQALNLWKETLARGLARNVVTINTVINGL 455

Query: 548 ADDGMTEEAYKLWQKLIEW 566
             +    EA +L+ ++ EW
Sbjct: 456 CKNRRMTEAEELFHRMKEW 474



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 101/380 (26%), Positives = 169/380 (44%), Gaps = 26/380 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  +C  G L  A+++   M     +P      + I GL    +  K + + 
Sbjct: 479 DSLTYRTLIDGYCKLGDLGRATQIRIEMENLGFVPSVEMFNSFITGLFIAKQSGKVNDIR 538

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+T+TY  ++ G CK G +  A  L  EM   G +P++   + ++   +  
Sbjct: 539 VEMSAKGLSPNTVTYGALIAGWCKEGNLHDACILYFEMVEKGLKPNLFICSVLVSCFYRE 598

Query: 236 GKFKQA-------------------------IGFWKDQLRKG-CPPYLITYTILIEQVCK 269
           GK  +A                         +    + L  G      I + I+I  +CK
Sbjct: 599 GKVDEANLVLQKLADTDMIQDCSASTLNIGKVAHIIESLAGGNHQSAKIMWNIVILGLCK 658

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +A A  + +D+ ++G  PD  TY+SL++     G  D A  + + +LS  + PN +T
Sbjct: 659 LGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSARLTPNIVT 718

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YN+L++ L           + + +     SP   TYN LI+G CK G    A     +M+
Sbjct: 719 YNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAFKLKQKMI 778

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +  QP + TY  ++  LC +G + EA++LL  +  ++  P  ITY TLI G A+ G M+
Sbjct: 779 KEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGYARCGNMK 838

Query: 450 KAMVLYGQMMENGISPDDIT 469
               LY +M   G+ P + T
Sbjct: 839 AITKLYNEMHICGLLPANWT 858



 Score =  108 bits (269), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 58/210 (27%), Positives = 106/210 (50%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I GL ++ R+  A  + + + + G +PD  TY+ ++ G    G I  A  L DEM  + 
Sbjct: 652 VILGLCKLGRVADARNLFEDLKVKGFIPDNFTYSSLIHGCSASGSIDLAFGLRDEMLSAR 711

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P+++TYN+++  +  +    +A+  +     KG  P  ITY  LI+  CK      A 
Sbjct: 712 LTPNIVTYNSLIYGLCKSCNVSRAVSLFNKLQSKGISPNAITYNTLIDGHCKDGNTTEAF 771

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++   M  EG  P + TY  L++  C QG  ++A+ +++ ++   ++PN ITY TL+   
Sbjct: 772 KLKQKMIKEGIQPTVFTYTILIHGLCTQGYMEEAIKLLDQMIENNVDPNFITYWTLIQGY 831

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
              G   A+ K+ + M+     P  +T ++
Sbjct: 832 ARCGNMKAITKLYNEMHICGLLPANWTGHV 861



 Score = 88.6 bits (218), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 63/238 (26%), Positives = 115/238 (48%), Gaps = 3/238 (1%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           ++ +++ LL +    G       + D M +A    T+ + N L+N L + G +  A+  F
Sbjct: 93  SAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDIGTAVAVF 152

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            QM      PD  T   +  A C++G +  A   L  +        L+ Y+ ++DG  + 
Sbjct: 153 QQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAVMDGYCRI 212

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK--MRNS 503
           G  E A  L   +   G+SP+ +T+  L+ G+C+  ++EEA  ++KEI K   K  +   
Sbjct: 213 GQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEI-KENEKIVIDEV 271

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           AY  +I+G C+  +++ A +V + MI +  + +  V++T++      G   E  KL Q
Sbjct: 272 AYGALINGYCQRGRMEDANRVRDEMIDAGVQVNMFVYNTMINGYCKLGRMGEVEKLLQ 329



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 86/177 (48%)

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           V K+      +++ +L A    G L +AL +   +  +     L + N L++ L + G +
Sbjct: 86  VYKDFSFSAASFDLLLRAHADAGQLKDALYVFDEMGKAGSRRTLRSCNRLLNQLVQAGDI 145

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
             A+ ++ QM   G  PDD T   +   +CR  +V  A D LKE+ + G  +   AY  V
Sbjct: 146 GTAVAVFQQMRCAGTLPDDFTVAIMAKAYCRDGRVAHAADFLKEMEEMGLDVNLVAYHAV 205

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + G C+  + ++A ++L  +      P+   ++ +VK    +G  EEA K+ +++ E
Sbjct: 206 MDGYCRIGQTEVARKLLHSLQVKGLSPNVVTYTLLVKGYCKEGRMEEAEKVVKEIKE 262


>gi|297797161|ref|XP_002866465.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297312300|gb|EFH42724.1| hypothetical protein ARALYDRAFT_496372 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 977

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 115/394 (29%), Positives = 189/394 (47%), Gaps = 5/394 (1%)

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D+  C+    G      +EKA  +   M+  G  P    Y  ++ G  +   +R    LL
Sbjct: 354 DYFICVMSKEG-----AMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELL 408

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
            E+          TY T ++ M  +G    A    K+    GC P ++ YT LI+   ++
Sbjct: 409 VEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQK 468

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
                A+ VL +M  +G +PD   YNSL+    K  K D+A   +  ++  G +P++ TY
Sbjct: 469 SRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTY 528

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
              +      G + + DK +  M E    P       LIN  CK G V  A ++F  MV 
Sbjct: 529 GAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVE 588

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +    D  TY  ++  L K G +N+A ++ H + G   +P + +Y TLIDG +K G M+K
Sbjct: 589 QGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQK 648

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A  ++ +M++ G++ + I +  L+ GFCR+ ++E+A +LL E+  +G       Y  +I 
Sbjct: 649 ASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIID 708

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           G CKS  +  A Q+ + M      PD  V++T+V
Sbjct: 709 GYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLV 742



 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/473 (25%), Positives = 213/473 (45%), Gaps = 40/473 (8%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
            G +  A  L D M      P      +LI G  R   + K  ++L  +     V    T
Sbjct: 363 EGAMEKAKALFDGMITFGVTPGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYT 422

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y   V G+C  G +  A  ++ EM  SGC P+V+ Y T+++T     +F  A+   K+  
Sbjct: 423 YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS------------ 297
            +G  P    Y  LI  + K   +  A   L +M   G  PD  TY +            
Sbjct: 483 EQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFA 542

Query: 298 -----------------------LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
                                  L+N  CK+GK  +A     +++ +G+  ++ TY  L+
Sbjct: 543 SADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLM 602

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           + L   G  +  ++I   M     +P VF+Y  LI+G  K G + +A + F++MV     
Sbjct: 603 NGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLT 662

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            +++ YN +LG  C+ G + +A +LL  ++G    P  +TY T+IDG  K G + +A  L
Sbjct: 663 SNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQL 722

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M   G+ PD   + TL+ G CR + VE A+ +  E  ++G    ++ +  +I+ + K
Sbjct: 723 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIF-ETNEKGCASSSAPFNALINWVFK 781

Query: 515 SKKVDMAIQVLELMISSRY----KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             K ++   ++  ++   +    KP+D  ++ ++  +  +G  E A +L+  +
Sbjct: 782 FGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHM 834



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 118/436 (27%), Positives = 219/436 (50%), Gaps = 18/436 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T    +  +   G+   A K +  M     IP+   C  LI    +  ++ +A    
Sbjct: 524 DAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAF 583

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + MV  G + D  TY +++ GL K G++  A  +  EM   G  PDV +Y T++      
Sbjct: 584 RSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKL 643

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++A   + + ++ G    +I Y +L+   C+   I +A E+LD+M+ +G  P+ VTY
Sbjct: 644 GNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTY 703

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC--WDAVDKILDIM 353
            ++++  CK G   +A  + + +  +G+ P+S  Y TL+      GC   + V++ + I 
Sbjct: 704 CTIIDGYCKSGDLAEAFQLFDEMKLKGLVPDSFVYTTLVD-----GCCRLNDVERAITIF 758

Query: 354 --NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV----SKNCQPDIVTYNTVLGAL 407
             NE   + +   +N LIN + K+G  +   +  N+++     K  +P+ VTYN ++  L
Sbjct: 759 ETNEKGCASSSAPFNALINWVFKFGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYL 818

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           CKEG L  A +L H +  ++  P +ITY +L++G  K G   +   ++ +++  GI PD+
Sbjct: 819 CKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDN 878

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKR-----GNKMRNSAYRLVIHGLCKSKKVDMAI 522
           I +  +I  F +     +A+ LL ++  +     G K+  S  R ++ G  K  ++++A 
Sbjct: 879 IMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAE 938

Query: 523 QVLELMISSRYKPDDT 538
           +V+E M+  +Y PD +
Sbjct: 939 KVVENMVRLKYIPDSS 954



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 125/495 (25%), Positives = 212/495 (42%), Gaps = 38/495 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T    ++  CS G L  A  ++  M      P+      LI+  ++  R   A +VL+ M
Sbjct: 422 TYGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEM 481

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PDT  YN ++ GL K  ++  A + L EM  +G +PD  TY   +    + G+F
Sbjct: 482 REQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEF 541

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  + K+ L  G  P  +  T LI + CK+  +  A      M  +G   D  TY  L
Sbjct: 542 ASADKYVKEMLECGVIPNKVLCTGLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVL 601

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   K GK +DA  + + +  +G+ P+  +Y TL+      G       I D M +A  
Sbjct: 602 MNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGL 661

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +  V  YN+L+ G C+ G +++A    ++M  K   P+ VTY T++   CK G L EA Q
Sbjct: 662 TSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQ 721

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY----------------------- 455
           L   +      P    Y TL+DG  +   +E+A+ ++                       
Sbjct: 722 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFETNEKGCASSSAPFNALINWVFK 781

Query: 456 -----------GQMMENGI----SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
                       ++M+        P+D+T+  +I   C+   +E A +L   + K     
Sbjct: 782 FGKTELTTDMINRLMDGSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMP 841

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  +++G  K  +      V + +I++  +PD+ ++S I+     +GMT +A  L 
Sbjct: 842 TVITYTSLLNGYDKMGRRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLL 901

Query: 561 QKLIEWKVFEKGTTL 575
            ++      + G  L
Sbjct: 902 DQMFAKNAVDDGCKL 916



 Score =  148 bits (374), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 111/465 (23%), Positives = 200/465 (43%), Gaps = 37/465 (7%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           +A +L   M+ +  +P       LI GL +  R+E A  +L  M   G   D + Y++++
Sbjct: 263 EALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEMNSVGLFADNVAYSILI 322

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            GL K     +A  L+ EM   G   D + Y+  +  M   G  ++A   +   +  G  
Sbjct: 323 DGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAMEKAKALFDGMITFGVT 382

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P    Y  LIE   ++  + +  E+L ++          TY + V   C  G  D A  +
Sbjct: 383 PGARAYASLIEGFFREKNVRKGYELLVEIKKRNIVISPYTYGTAVKGMCSSGDLDGAYNI 442

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +  + + G  PN + Y TL+ +   +  +    ++L  M E   +P  F YN LI GL K
Sbjct: 443 VKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMREQGIAPDTFCYNSLIIGLSK 502

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA---------------------------L 407
              +D A +   +MV    +PD  TY   +                             L
Sbjct: 503 AKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFASADKYVKEMLECGVIPNKVL 562

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLI---------TYNTLIDGLAKKGCMEKAMVLYGQM 458
           C  G++NE  +   ++   S    ++         TY  L++GL K G +  A  ++ +M
Sbjct: 563 CT-GLINEYCKKGKVIEACSAFRSMVEQGILGDAKTYTVLMNGLVKNGKVNDAEEIFHEM 621

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
              GI+PD  ++ TLI GF +   +++A  +  E+ + G       Y +++ G C+S ++
Sbjct: 622 RGKGIAPDVFSYGTLIDGFSKLGNMQKASSIFDEMVQAGLTSNVIIYNMLLGGFCRSGEI 681

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + A ++L+ M    + P+   + TI+      G   EA++L+ ++
Sbjct: 682 EKAKELLDEMSGKGFPPNAVTYCTIIDGYCKSGDLAEAFQLFDEM 726



 Score =  138 bits (348), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 109/417 (26%), Positives = 171/417 (41%), Gaps = 80/417 (19%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D KT   ++      GK+ DA ++   M  +   PD      LI G  ++  ++KAS + 
Sbjct: 594 DAKTYTVLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLIDGFSKLGNMQKASSIF 653

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS--------------------- 214
             MV +G   + I YNM++GG C+ G+I  A  LLDEMS                     
Sbjct: 654 DEMVQAGLTSNVIIYNMLLGGFCRSGEIEKAKELLDEMSGKGFPPNAVTYCTIIDGYCKS 713

Query: 215 --------------VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
                         + G  PD   Y T++                      GC       
Sbjct: 714 GDLAEAFQLFDEMKLKGLVPDSFVYTTLV---------------------DGC------- 745

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
                  C+   + RAI + +    +GC+     +N+L+N+  K GK +    +IN L+ 
Sbjct: 746 -------CRLNDVERAITIFETNE-KGCASSSAPFNALINWVFKFGKTELTTDMINRLMD 797

Query: 321 RGME----PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
              +    PN +TYN ++  L   G  +A  ++   M +A+  PTV TY  L+NG  K G
Sbjct: 798 GSFDKFGKPNDVTYNIMIDYLCKEGNLEAAKELFHHMQKANLMPTVITYTSLLNGYDKMG 857

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS-----CSPC 431
                 + F+++++   +PD + Y+ ++ A  KEGM  +AL LL  +   +     C   
Sbjct: 858 RRSEMFSVFDEVIAAGIEPDNIMYSVIINAFLKEGMTTKALVLLDQMFAKNAVDDGCKLS 917

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           + T   L+ G AK G ME A  +   M+     PD  T   LI   C +     A D
Sbjct: 918 ISTCRALLSGFAKVGEMEVAEKVVENMVRLKYIPDSSTVIELINESCISSNQRMAAD 974



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 104/458 (22%), Positives = 200/458 (43%), Gaps = 37/458 (8%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR---- 204
           +P    C +L+  L++ +R++    V + MV    V D  +Y M++G  C+ G ++    
Sbjct: 186 VPSLARCNHLLDALLKRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKD 245

Query: 205 -----------------SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
                             A+ L   MS  G  P   +YN ++  +    + + A     +
Sbjct: 246 VLLKTEEELGTATLNVDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVE 305

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
               G     + Y+ILI+ + K      A  ++ +M   G S D + Y+  +    K+G 
Sbjct: 306 MNSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGA 365

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV---FT 364
            + A  + + +++ G+ P +  Y +L+           V K  +++ E      V   +T
Sbjct: 366 MEKAKALFDGMITFGVTPGARAYASLIEGFFRE---KNVRKGYELLVEIKKRNIVISPYT 422

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           Y   + G+C  G +D A N   +M +  C+P++V Y T++    ++    +A+++L  + 
Sbjct: 423 YGTAVKGMCSSGDLDGAYNIVKEMGASGCRPNVVIYTTLIKTFLQKSRFGDAVRVLKEMR 482

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
               +P    YN+LI GL+K   M++A     +M+ENG  PD  T+   I G+  A +  
Sbjct: 483 EQGIAPDTFCYNSLIIGLSKAKKMDEARSFLLEMVENGFKPDAFTYGAFISGYIEAGEFA 542

Query: 485 EAVDLLKEIGKRG---NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            A   +KE+ + G   NK+  +    +I+  CK  KV  A      M+      D   ++
Sbjct: 543 SADKYVKEMLECGVIPNKVLCTG---LINEYCKKGKVIEACSAFRSMVEQGILGDAKTYT 599

Query: 542 TIVKKVADDGMTEEAYKLWQKL----IEWKVFEKGTTL 575
            ++  +  +G   +A +++ ++    I   VF  GT +
Sbjct: 600 VLMNGLVKNGKVNDAEEIFHEMRGKGIAPDVFSYGTLI 637



 Score = 71.6 bits (174), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 80/315 (25%), Positives = 142/315 (45%), Gaps = 33/315 (10%)

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ---GKYDDAVL 313
           L +++ L   +C    I +A  V+  M IE   P    ++S+V   C +   GK DD VL
Sbjct: 97  LDSFSFLALDLCNFGSIEKAHSVVIRM-IERKWPVAEVWSSIVR--CLREFVGKSDDRVL 153

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           +   L+   +E   +     + S          D  LD++      P++   N L++ L 
Sbjct: 154 LFGILIDGYIEKGFLDEAVFVFS-------STKDLDLDLV------PSLARCNHLLDALL 200

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K   +D   + +  MV +N   D+ +Y  ++GA C++G +  A  +L           L 
Sbjct: 201 KRNRLDLFWDVYKGMVERNVVFDVQSYEMLIGAHCRDGNVQLAKDVL-----------LK 249

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           T   L  G A    +++A+ L   M   G+ P   ++  LI G C+  ++E+A  LL E+
Sbjct: 250 TEEEL--GTATLN-VDEALELKKSMSCKGLVPSRQSYNLLIDGLCKQKRLEDAKSLLVEM 306

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
              G    N AY ++I GL K +  D A  ++  M+S  +  D  ++   +  ++ +G  
Sbjct: 307 NSVGLFADNVAYSILIDGLLKGRNADAANGLVHEMVSHGFSIDPMMYDYFICVMSKEGAM 366

Query: 554 EEAYKLWQKLIEWKV 568
           E+A  L+  +I + V
Sbjct: 367 EKAKALFDGMITFGV 381


>gi|255551759|ref|XP_002516925.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223544013|gb|EEF45539.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 901

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 212/439 (48%), Gaps = 1/439 (0%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           F   GK+  A K    +     +PD     ++I  L + +R+++A ++ + M  +  VP 
Sbjct: 278 FGKAGKVDMAWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPC 337

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
              YN M+ G    G+   A +LL+     GC P VI YN IL  +   G+  +A+  + 
Sbjct: 338 AYAYNTMIMGYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTF- 396

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           ++++K   P L TY +LI+ +CK   +  A +V D M   G  P+++T N +++  CK  
Sbjct: 397 EEMKKDAAPNLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAK 456

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K D+A  +   +  +   P+ +T+ +L+  LG +G  D   ++ + M ++   P    Y 
Sbjct: 457 KLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYT 516

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI    K G  +     F +M+ + C PD+   N  +  + K G   +   L   +   
Sbjct: 517 SLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSR 576

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P +++Y+ LI GL K G   +   L+  M E G   D   + T I GFC++ +V +A
Sbjct: 577 GFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKA 636

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             LL+E+  +G +     Y  VI GL K  ++D A  + E   S+  + +  ++S+++  
Sbjct: 637 YQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDG 696

Query: 547 VADDGMTEEAYKLWQKLIE 565
               G  +EAY + ++L++
Sbjct: 697 FGKVGRIDEAYLIMEELMQ 715



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 120/479 (25%), Positives = 217/479 (45%), Gaps = 55/479 (11%)

Query: 87  VNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARR 146
           + + LR     KK   P+L             T N ++   C  G++  A K+ D M   
Sbjct: 389 LGEALRTFEEMKKDAAPNLS------------TYNVLIDMLCKAGEVEAAFKVRDAMKEA 436

Query: 147 NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
              P+      +I  L +  ++++A  + + M      PD +T+  ++ GL K+G++  A
Sbjct: 437 GLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDA 496

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL--------- 257
             L ++M  S   P+ + Y +++++ F  G+ +     +K+ + +GC P L         
Sbjct: 497 YRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFKEMIHRGCSPDLRLLNAYMDC 556

Query: 258 --------------------------ITYTILIEQVCKQCGIAR-AIEVLDDMAIEGCSP 290
                                     ++Y+ILI  + K  G AR   E+   M  +GC  
Sbjct: 557 VFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVK-AGFARETYELFYAMKEQGCVL 615

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D   YN+ ++  CK GK + A  ++  + ++G +P  +TY +++  L      D +D+  
Sbjct: 616 DTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAK---IDRLDEAY 672

Query: 351 DIMNEASHSP---TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
            +  EA  +     V  Y+ LI+G  K G +D A     +++ K   P++ T+N +L AL
Sbjct: 673 MLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDAL 732

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            K   +NEAL     +     +P  ITY+ LI+GL +     KA V + +M + G+ P+ 
Sbjct: 733 VKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNT 792

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           IT+ T+I G  +A  + EA  L +     G    +++Y  +I GL  S++   A ++ E
Sbjct: 793 ITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFE 851



 Score =  172 bits (436), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 99/382 (25%), Positives = 185/382 (48%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T   ++     +G++ DA +L + M   ++IP+     +LI+   +  R E   K+ 
Sbjct: 476 DEVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIF 535

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  PD    N  +  + K G+     AL +E+   G  PDV++Y+ ++  +   
Sbjct: 536 KEMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKA 595

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++    +     +GC      Y   I+  CK   + +A ++L++M  +G  P +VTY
Sbjct: 596 GFARETYELFYAMKEQGCVLDTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTY 655

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            S+++   K  + D+A ++     S G+E N + Y++L+   G  G  D    I++ + +
Sbjct: 656 GSVIDGLAKIDRLDEAYMLFEEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQ 715

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P V+T+N L++ L K   ++ A+  F  M +    P+ +TY+ ++  LC+    N+
Sbjct: 716 KGLTPNVYTWNCLLDALVKAEEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNK 775

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A      +      P  ITY T+I GLAK G + +A  L+ +   NG  PD  ++  +I 
Sbjct: 776 AFVFWQEMQKQGLKPNTITYTTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIE 835

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
           G   + +  EA  + +E   +G
Sbjct: 836 GLSYSRRAMEAYKIFEETRMKG 857



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 114/434 (26%), Positives = 202/434 (46%), Gaps = 1/434 (0%)

Query: 132 KLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           KL +   LI  M +    P F     LI  L  +   +    +   M   G       + 
Sbjct: 178 KLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQELGYEVSVHLFT 237

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
            ++    + G++ +A++LLDEM  +    D++ YN  +      GK   A  F+ +    
Sbjct: 238 TVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDMAWKFFHEIKSH 297

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P  +TYT +I  +CK   +  A+E+ + M      P    YN+++      GK+D+A
Sbjct: 298 GLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIMGYGSAGKFDEA 357

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             ++    +RG  P+ I YN +L  LG +G      +  + M + + +P + TYN+LI+ 
Sbjct: 358 YSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-APNLSTYNVLIDM 416

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           LCK G V+ A    + M      P+++T N ++  LCK   L+EA  +   +N   CSP 
Sbjct: 417 LCKAGEVEAAFKVRDAMKEAGLFPNVMTVNIMIDRLCKAKKLDEACSIFEGMNHKICSPD 476

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
            +T+ +LIDGL K+G ++ A  LY QM+++   P+ + + +LI  F +  + E+   + K
Sbjct: 477 EVTFCSLIDGLGKQGRVDDAYRLYEQMLDSDKIPNAVVYTSLIKSFFKCGRKEDGHKIFK 536

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           E+  RG           +  + K+ +      + E + S  + PD   +S ++  +   G
Sbjct: 537 EMIHRGCSPDLRLLNAYMDCVFKAGETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAG 596

Query: 552 MTEEAYKLWQKLIE 565
              E Y+L+  + E
Sbjct: 597 FARETYELFYAMKE 610



 Score =  128 bits (322), Expect = 8e-27,   Method: Compositional matrix adjust.
 Identities = 82/330 (24%), Positives = 151/330 (45%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G+      L + +  R  IPD      LI GL++     +  ++   M   G V DT  Y
Sbjct: 561 GETGKGRALFEEIKSRGFIPDVMSYSILIHGLVKAGFARETYELFYAMKEQGCVLDTHAY 620

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N  + G CK G++  A  LL+EM   G +P V+TY +++  +    +  +A   +++   
Sbjct: 621 NTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKS 680

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G    ++ Y+ LI+   K   I  A  +++++  +G +P++ T+N L++   K  + ++
Sbjct: 681 NGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINE 740

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A++   N+ +    PN ITY+ L++ L     ++        M +    P   TY  +I 
Sbjct: 741 ALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITYTTMIA 800

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GL K G +  A + F +  +    PD  +YN ++  L       EA ++        C+ 
Sbjct: 801 GLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRMKGCNI 860

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
              T   L+D L K  C+E+A ++   + E
Sbjct: 861 HTKTCIALLDALQKDECLEQAAIVGAVLRE 890



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 93/403 (23%), Positives = 162/403 (40%), Gaps = 84/403 (20%)

Query: 240 QAIGFWKDQLRKG----CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           QAI +++   RK     CP     Y  L+  + K        ++L +M+I G  P   T 
Sbjct: 110 QAISYFRWTERKTDQALCPE---AYDSLLLVMAKNVKFDYFEQILGEMSIAGFGPSTKTC 166

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+    K  K  +   +I  +      P    Y TL+ +L S    D +  +   M E
Sbjct: 167 IELILSCIKSNKLREGFDLIQCMRKFKFRPAFSAYTTLIGALSSVQESDIMLTLFHQMQE 226

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN-------------- 401
             +  +V  +  +I    + G +D A++  ++M S     DIV YN              
Sbjct: 227 LGYEVSVHLFTTVIRVFAREGRLDAALSLLDEMKSNCLHADIVLYNVCIDCFGKAGKVDM 286

Query: 402 ---------------------TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
                                +++G LCK   L+EA+++   +  +   PC   YNT+I 
Sbjct: 287 AWKFFHEIKSHGLLPDDVTYTSMIGVLCKGNRLDEAVEIFEQMEQNRNVPCAYAYNTMIM 346

Query: 441 G-----------------------------------LAKKGCMEKAMVLYGQMMENGISP 465
           G                                   L KKG + +A+  + +M ++  +P
Sbjct: 347 GYGSAGKFDEAYSLLERQKARGCIPSVIAYNCILTCLGKKGRLGEALRTFEEMKKDA-AP 405

Query: 466 DDITHRTLIWGFCRADQVEEAV---DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           +  T+  LI   C+A +VE A    D +KE G   N M      ++I  LCK+KK+D A 
Sbjct: 406 NLSTYNVLIDMLCKAGEVEAAFKVRDAMKEAGLFPNVM---TVNIMIDRLCKAKKLDEAC 462

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            + E M      PD+  F +++  +   G  ++AY+L++++++
Sbjct: 463 SIFEGMNHKICSPDEVTFCSLIDGLGKQGRVDDAYRLYEQMLD 505



 Score = 87.4 bits (215), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 63/279 (22%), Positives = 118/279 (42%), Gaps = 35/279 (12%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N  +  FC  GK+  A +L++ M  + + P      ++I GL +IDR+++A  + 
Sbjct: 616 DTHAYNTFIDGFCKSGKVNKAYQLLEEMKTKGRQPTVVTYGSVIDGLAKIDRLDEAYMLF 675

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM--- 232
           +    +G   + + Y+ ++ G  K G+I  A  +++E+   G  P+V T+N +L  +   
Sbjct: 676 EEAKSNGLELNVVIYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKA 735

Query: 233 ---------FDN-----------------------GKFKQAIGFWKDQLRKGCPPYLITY 260
                    F N                        KF +A  FW++  ++G  P  ITY
Sbjct: 736 EEINEALVCFQNMKNLKGTPNHITYSILINGLCRVRKFNKAFVFWQEMQKQGLKPNTITY 795

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           T +I  + K   IA A  + +     G  PD  +YN+++       +  +A  +      
Sbjct: 796 TTMIAGLAKAGNIAEASSLFERFKANGGVPDSASYNAIIEGLSYSRRAMEAYKIFEETRM 855

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +G   ++ T   LL +L    C +    +  ++ E + S
Sbjct: 856 KGCNIHTKTCIALLDALQKDECLEQAAIVGAVLREIAKS 894


>gi|32489931|emb|CAE05523.1| OSJNBa0038P21.16 [Oryza sativa Japonica Group]
 gi|38347491|emb|CAE05839.2| OSJNBa0091C07.1 [Oryza sativa Japonica Group]
          Length = 844

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 229/451 (50%), Gaps = 3/451 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I++  C   ++  A  ++  M      PD      +I GL +   ++KA +VL+ MV 
Sbjct: 249 NSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 308

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P++ITYN ++ G    G    ++ +  +MS  G  P V   N+ +  +F +G+  +
Sbjct: 309 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 368

Query: 241 AIGFWKDQLRKGCPPYLITYTILIE--QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           A   +   + KG  P +I+Y+ ++          +A    + + M  +G +P+   +N L
Sbjct: 369 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 428

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   + G  D A+L+  ++ ++GM P+++T+ T++ SL   G  D      + M +   
Sbjct: 429 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 488

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY-NTVLGALCKEGMLNEAL 417
            P+   Y  LI G C +G + +A    ++M++K+  P  V Y ++++  LCKEG + E  
Sbjct: 489 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 548

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            ++ ++  +   P ++T+N+L++G    G ME+A  L   M   GI P+   + TL+ G+
Sbjct: 549 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 608

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  ++++A+ + +++  +G K  +  Y +++HGL ++++   A ++   MI S      
Sbjct: 609 CKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSI 668

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +  ++  +  +  T+EA  L +KL    V
Sbjct: 669 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 699



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 224/456 (49%), Gaps = 8/456 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   G++  A  L   M  +  +P    C ++I+ L ++  ++KA  ++Q MV SG
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY++++ GLCK   +  A  +L++M  +G  P+ ITYN+++     +G + +++
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN-- 300
             +K     G  P +      I  + K      A  + D M ++G  PDI++Y+++++  
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 395

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
            +       D   + N +L++G+ PN   +N L+++    G  D    I + M      P
Sbjct: 396 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 455

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+  +I+ LC+ G +D A++ FN MV     P    Y  ++   C  G L +A +L+
Sbjct: 456 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 515

Query: 421 -HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
             ++N     P +  ++++I+ L K+G + +   +   M++ G  P+ +T  +L+ G+C 
Sbjct: 516 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 575

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              +EEA  LL  +   G +     Y  ++ G CK+ ++D A+ V   M+    KP   +
Sbjct: 576 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 635

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +S I+  +     T  A K++ ++I     E GTT+
Sbjct: 636 YSIILHGLFQARRTTAAKKMFHEMI-----ESGTTV 666



 Score =  159 bits (402), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/439 (24%), Positives = 201/439 (45%), Gaps = 3/439 (0%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L D   + ++M  +   P+ H    LI    R   ++KA  + + M   G +PDT+T+  
Sbjct: 403 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 462

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++  LC+ G++  A+   + M   G  P    Y  +++   ++G+  +A     + + K 
Sbjct: 463 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 522

Query: 253 CPPYLITY-TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
            PP  + Y + +I  +CK+  +A   +++D M   G  P++VT+NSL+   C  G  ++A
Sbjct: 523 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 582

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             +++ + S G+EPN   Y TL+      G  D    +   M      PT   Y+I+++G
Sbjct: 583 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 642

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           L +      A   F++M+       I TY  VLG LC+    +EA  LL  L   +    
Sbjct: 643 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 702

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           +IT+N +I  + K G  ++A  L+  +   G+ P+  T+  +I    + +  EEA +L  
Sbjct: 703 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 762

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            + K G+   +     ++  L    +V  A   L ++  +    + +  S +    + +G
Sbjct: 763 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 822

Query: 552 MTEEAYKLWQKLIEWKVFE 570
              E  KL     +++ FE
Sbjct: 823 KYREHIKLLPA--KYQFFE 839



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 193/387 (49%), Gaps = 9/387 (2%)

Query: 185 PDTI-TYNMMVGGLCKRGQIRS--AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           P TI TYN+++   C R   R    +A++  +  +G  PD  +Y+ I   + D G+  +A
Sbjct: 173 PPTIHTYNILID--CYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD-GEVDKA 229

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              + + + +G  P ++    +I+++CK   + +A  ++  M   G +PD+ TY+ +++ 
Sbjct: 230 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 289

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK    D A  V+  ++  G  PNSITYN+L+H     G W+   ++   M+     PT
Sbjct: 290 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 349

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG--ALCKEGMLNEALQL 419
           V   N  I+ L K+G  + A   F+ MV K  +PDI++Y+T+L   A   +  L +   +
Sbjct: 350 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 409

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            +L+     +P    +N LI+  A+ G M+KAM+++  M   G+ PD +T  T+I   CR
Sbjct: 410 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 469

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT- 538
             ++++A+     +   G     + Y  +I G C   ++  A +++  M++    P    
Sbjct: 470 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 529

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            FS+I+  +  +G   E   +   +++
Sbjct: 530 YFSSIINNLCKEGRVAEGKDIMDMMVQ 556



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 190/405 (46%), Gaps = 2/405 (0%)

Query: 123 ILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           IL N  +R  + D + LI + M  +  IPD      +I  L RI R++ A      MV  
Sbjct: 427 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 486

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY-NTILRTMFDNGKFKQ 240
           G  P    Y  ++ G C  G++  A  L+ EM      P  + Y ++I+  +   G+  +
Sbjct: 487 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 546

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                   ++ G  P ++T+  L+E  C    +  A  +LD MA  G  P+   Y +LV+
Sbjct: 547 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 606

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+ DDA+ V  ++L +G++P S+ Y+ +LH L       A  K+   M E+  + 
Sbjct: 607 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 666

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           ++ TY +++ GLC+    D A     ++ + N + DI+T+N V+ A+ K G   EA +L 
Sbjct: 667 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 726

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++     P + TY+ +I  L K+   E+A  L+  + ++G + D      ++      
Sbjct: 727 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 786

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
            +V +A + L  IG+    +  S   L+     +  K    I++L
Sbjct: 787 AEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 831


>gi|30794106|gb|AAP40495.1| unknown protein [Arabidopsis thaliana]
          Length = 974

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 217/473 (45%), Gaps = 40/473 (8%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
            G +  A  L D M     IP      +LI G  R   + +  ++L  M     V    T
Sbjct: 360 EGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREKNVRQGYELLVEMKKRNIVISPYT 419

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y  +V G+C  G +  A  ++ EM  SGC P+V+ Y T+++T   N +F  A+   K+  
Sbjct: 420 YGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEMK 479

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS------------ 297
            +G  P +  Y  LI  + K   +  A   L +M   G  P+  TY +            
Sbjct: 480 EQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEFA 539

Query: 298 -----------------------LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
                                  L+N  CK+ K  +A     +++ +G+  ++ TY  L+
Sbjct: 540 SADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVLM 599

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           + L      D  ++I   M     +P VF+Y +LING  K G + +A + F++MV +   
Sbjct: 600 NGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGLT 659

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+++ YN +LG  C+ G + +A +LL  ++     P  +TY T+IDG  K G + +A  L
Sbjct: 660 PNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFRL 719

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M   G+ PD   + TL+ G CR + VE A+ +     K+G     + +  +I+ + K
Sbjct: 720 FDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFG-TNKKGCASSTAPFNALINWVFK 778

Query: 515 SKKVDMAIQVLELMISSRY----KPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
             K ++  +VL  ++   +    KP+D  ++ ++  +  +G  E A +L+ ++
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM 831



 Score =  180 bits (457), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 115/372 (30%), Positives = 178/372 (47%), Gaps = 10/372 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D KT   ++       K+ DA ++   M  +   PD      LI G  ++  ++KAS + 
Sbjct: 591 DAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIF 650

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  P+ I YNM++GG C+ G+I  A  LLDEMSV G  P+ +TY TI+     +
Sbjct: 651 DEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKS 710

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A   + +   KG  P    YT L++  C+   + RAI +      +GC+     +
Sbjct: 711 GDLAEAFRLFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNK-KGCASSTAPF 769

Query: 296 NSLVNFSCKQGKYDDAVLVINNLL----SRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           N+L+N+  K GK +    V+N L+     R  +PN +TYN ++  L   G  +A  ++  
Sbjct: 770 NALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFH 829

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M  A+  PTV TY  L+NG  K G        F++ ++   +PD + Y+ ++ A  KEG
Sbjct: 830 QMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEG 889

Query: 412 MLNEALQLLHLLNGSS-----CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           M  +AL L+  +   +     C   + T   L+ G AK G ME A  +   M+     PD
Sbjct: 890 MTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKVGEMEVAEKVMENMVRLQYIPD 949

Query: 467 DITHRTLIWGFC 478
             T   LI   C
Sbjct: 950 SATVIELINESC 961



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 115/441 (26%), Positives = 218/441 (49%), Gaps = 22/441 (4%)

Query: 113 VENDEKTN----NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           VEN  K N       +  +    +   A K +  M     +P+   C  LI    + +++
Sbjct: 514 VENGLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKV 573

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A    + MV  G + D  TY +++ GL K  ++  A  +  EM   G  PDV +Y  +
Sbjct: 574 IEACSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVL 633

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      G  ++A   + + + +G  P +I Y +L+   C+   I +A E+LD+M+++G 
Sbjct: 634 INGFSKLGNMQKASSIFDEMVEEGLTPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGL 693

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC--WDAV 346
            P+ VTY ++++  CK G   +A  + + +  +G+ P+S  Y TL+      GC   + V
Sbjct: 694 HPNAVTYCTIIDGYCKSGDLAEAFRLFDEMKLKGLVPDSFVYTTLVD-----GCCRLNDV 748

Query: 347 DKILDIM--NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS----KNCQPDIVTY 400
           ++ + I   N+   + +   +N LIN + K+G  +      N+++     +  +P+ VTY
Sbjct: 749 ERAITIFGTNKKGCASSTAPFNALINWVFKFGKTELKTEVLNRLMDGSFDRFGKPNDVTY 808

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N ++  LCKEG L  A +L H +  ++  P +ITY +L++G  K G   +   ++ + + 
Sbjct: 809 NIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEMFPVFDEAIA 868

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR-----GNKMRNSAYRLVIHGLCKS 515
            GI PD I +  +I  F +     +A+ L+ ++  +     G K+  S  R ++ G  K 
Sbjct: 869 AGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCRALLSGFAKV 928

Query: 516 KKVDMAIQVLELMISSRYKPD 536
            ++++A +V+E M+  +Y PD
Sbjct: 929 GEMEVAEKVMENMVRLQYIPD 949



 Score =  172 bits (435), Expect = 5e-40,   Method: Compositional matrix adjust.
 Identities = 122/496 (24%), Positives = 210/496 (42%), Gaps = 40/496 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++  CS G L  A  ++  M      P+      LI+  ++  R   A +VL+ M
Sbjct: 419 TYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYTTLIKTFLQNSRFGDAMRVLKEM 478

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD   YN ++ GL K  ++  A + L EM  +G +P+  TY   +    +  +F
Sbjct: 479 KEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVENGLKPNAFTYGAFISGYIEASEF 538

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  + K+    G  P  +  T LI + CK+  +  A      M  +G   D  TY  L
Sbjct: 539 ASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEACSAYRSMVDQGILGDAKTYTVL 598

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   K  K DDA  +   +  +G+ P+  +Y  L++     G       I D M E   
Sbjct: 599 MNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLINGFSKLGNMQKASSIFDEMVEEGL 658

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V  YN+L+ G C+ G +++A    ++M  K   P+ VTY T++   CK G L EA +
Sbjct: 659 TPNVIIYNMLLGGFCRSGEIEKAKELLDEMSVKGLHPNAVTYCTIIDGYCKSGDLAEAFR 718

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG---------------------- 456
           L   +      P    Y TL+DG  +   +E+A+ ++G                      
Sbjct: 719 LFDEMKLKGLVPDSFVYTTLVDGCCRLNDVERAITIFGTNKKGCASSTAPFNALINWVFK 778

Query: 457 ------------QMMENGI----SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
                       ++M+        P+D+T+  +I   C+   +E A +L  ++ +  N M
Sbjct: 779 FGKTELKTEVLNRLMDGSFDRFGKPNDVTYNIMIDYLCKEGNLEAAKELFHQM-QNANLM 837

Query: 501 RNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  +++G  K  +      V +  I++  +PD  ++S I+     +GMT +A  L
Sbjct: 838 PTVITYTSLLNGYDKMGRRAEMFPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVL 897

Query: 560 WQKLIEWKVFEKGTTL 575
             ++      + G  L
Sbjct: 898 VDQMFAKNAVDDGCKL 913



 Score =  119 bits (299), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 103/499 (20%), Positives = 212/499 (42%), Gaps = 56/499 (11%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +   + ++G + +A  +         +P    C  L+  L+R +R++    V + MV   
Sbjct: 157 LFDGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERN 216

Query: 183 GVPDTITYNMMVGGLCKRGQIR---------------------SAIALLDEMSVSGCEPD 221
            V D  TY+M++   C+ G ++                      A+ L + M   G  P 
Sbjct: 217 VVFDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPL 276

Query: 222 VITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
             TY+ ++  +    + + A     +    G      TY++LI+ + K      A  ++ 
Sbjct: 277 KYTYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLIDGLLKGRNADAAKGLVH 336

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +M   G +     Y+  +    K+G  + A  + + +++ G+ P +  Y +L+       
Sbjct: 337 EMVSHGINIKPYMYDCCICVMSKEGVMEKAKALFDGMIASGLIPQAQAYASLIEGYCREK 396

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
                 ++L  M + +   + +TY  ++ G+C  G +D A N   +M++  C+P++V Y 
Sbjct: 397 NVRQGYELLVEMKKRNIVISPYTYGTVVKGMCSSGDLDGAYNIVKEMIASGCRPNVVIYT 456

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
           T++    +     +A+++L  +     +P +  YN+LI GL+K   M++A     +M+EN
Sbjct: 457 TLIKTFLQNSRFGDAMRVLKEMKEQGIAPDIFCYNSLIIGLSKAKRMDEARSFLVEMVEN 516

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG---NKM-----------------R 501
           G+ P+  T+   I G+  A +   A   +KE+ + G   NK+                  
Sbjct: 517 GLKPNAFTYGAFISGYIEASEFASADKYVKEMRECGVLPNKVLCTGLINEYCKKEKVIEA 576

Query: 502 NSAYR---------------LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            SAYR               ++++GL K+ KVD A ++   M      PD   +  ++  
Sbjct: 577 CSAYRSMVDQGILGDAKTYTVLMNGLFKNDKVDDAEEIFREMRGKGIAPDVFSYGVLING 636

Query: 547 VADDGMTEEAYKLWQKLIE 565
            +  G  ++A  ++ +++E
Sbjct: 637 FSKLGNMQKASSIFDEMVE 655



 Score = 48.9 bits (115), Expect = 0.007,   Method: Compositional matrix adjust.
 Identities = 38/162 (23%), Positives = 68/162 (41%), Gaps = 5/162 (3%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           F + ++ T N ++   C  G L  A +L   M   N +P      +L+ G  ++ R  + 
Sbjct: 800 FGKPNDVTYNIMIDYLCKEGNLEAAKELFHQMQNANLMPTVITYTSLLNGYDKMGRRAEM 859

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-----GCEPDVITYN 226
             V    + +G  PD I Y++++    K G    A+ L+D+M        GC+  + T  
Sbjct: 860 FPVFDEAIAAGIEPDHIMYSVIINAFLKEGMTTKALVLVDQMFAKNAVDDGCKLSISTCR 919

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
            +L      G+ + A    ++ +R    P   T   LI + C
Sbjct: 920 ALLSGFAKVGEMEVAEKVMENMVRLQYIPDSATVIELINESC 961



 Score = 43.9 bits (102), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 47/221 (21%), Positives = 88/221 (39%), Gaps = 40/221 (18%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKN------------CQPDIV-------TYNTVL 404
           +++ L   LC +G  ++A++   +M+ +N            C  + V        +  + 
Sbjct: 99  SFSFLALDLCNFGSFEKALSVVERMIERNWPVAEVWSSIVRCSQEFVGKSDDGVLFGILF 158

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
                +G + EA+ +     G    P L     L+D L +   ++    +Y  M+E  + 
Sbjct: 159 DGYIAKGYIEEAVFVFSSSMGLELVPRLSRCKVLLDALLRWNRLDLFWDVYKGMVERNVV 218

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN----------KMRNS----------- 503
            D  T+  LI   CRA  V+   D+L +  K             K++ S           
Sbjct: 219 FDVKTYHMLIIAHCRAGNVQLGKDVLFKTEKEFRTATLNVDGALKLKESMICKGLVPLKY 278

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            Y ++I GLCK K+++ A  +L  M S     D+  +S ++
Sbjct: 279 TYDVLIDGLCKIKRLEDAKSLLVEMDSLGVSLDNHTYSLLI 319


>gi|218194637|gb|EEC77064.1| hypothetical protein OsI_15455 [Oryza sativa Indica Group]
          Length = 864

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 229/451 (50%), Gaps = 3/451 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I++  C   ++  A  ++  M      PD      +I GL +   ++KA +VL+ MV 
Sbjct: 229 NSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 288

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P++ITYN ++ G    G    ++ +  +MS  G  P V   N+ +  +F +G+  +
Sbjct: 289 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 348

Query: 241 AIGFWKDQLRKGCPPYLITYTILIE--QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           A   +   + KG  P +I+Y+ ++          +A    + + M  +G +P+   +N L
Sbjct: 349 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 408

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   + G  D A+L+  ++ ++GM P+++T+ T++ SL   G  D      + M +   
Sbjct: 409 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 468

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY-NTVLGALCKEGMLNEAL 417
            P+   Y  LI G C +G + +A    ++M++K+  P  V Y ++++  LCKEG + E  
Sbjct: 469 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 528

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            ++ ++  +   P ++T+N+L++G    G ME+A  L   M   GI P+   + TL+ G+
Sbjct: 529 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 588

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  ++++A+ + +++  +G K  +  Y +++HGL ++++   A ++   MI S      
Sbjct: 589 CKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSI 648

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +  ++  +  +  T+EA  L +KL    V
Sbjct: 649 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 679



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 224/456 (49%), Gaps = 8/456 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   G++  A  L   M  +  +P    C ++I+ L ++  ++KA  ++Q MV SG
Sbjct: 196 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 255

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY++++ GLCK   +  A  +L++M  +G  P+ ITYN+++     +G + +++
Sbjct: 256 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 315

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN-- 300
             +K     G  P +      I  + K      A  + D M ++G  PDI++Y+++++  
Sbjct: 316 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 375

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
            +       D   + N +L++G+ PN   +N L+++    G  D    I + M      P
Sbjct: 376 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 435

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+  +I+ LC+ G +D A++ FN MV     P    Y  ++   C  G L +A +L+
Sbjct: 436 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 495

Query: 421 -HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
             ++N     P +  ++++I+ L K+G + +   +   M++ G  P+ +T  +L+ G+C 
Sbjct: 496 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 555

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              +EEA  LL  +   G +     Y  ++ G CK+ ++D A+ V   M+    KP   +
Sbjct: 556 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 615

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +S I+  +     T  A K++ ++I     E GTT+
Sbjct: 616 YSIILHGLFQARRTTAAKKMFHEMI-----ESGTTV 646



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 193/387 (49%), Gaps = 9/387 (2%)

Query: 185 PDTI-TYNMMVGGLCKRGQIRS--AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           P TI TYN+++   C R   R    +A++  +  +G  PD  +Y+ I   + D G+  +A
Sbjct: 153 PPTIHTYNILID--CYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD-GEVDKA 209

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              + + + +G  P ++    +I+++CK   + +A  ++  M   G +PD+ TY+ +++ 
Sbjct: 210 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 269

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK    D A  V+  ++  G  PNSITYN+L+H     G W+   ++   M+     PT
Sbjct: 270 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 329

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG--ALCKEGMLNEALQL 419
           V   N  I+ L K+G  + A   F+ MV K  +PDI++Y+T+L   A   +  L +   +
Sbjct: 330 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 389

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            +L+     +P    +N LI+  A+ G M+KAM+++  M   G+ PD +T  T+I   CR
Sbjct: 390 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 449

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT- 538
             ++++A+     +   G     + Y  +I G C   ++  A +++  M++    P    
Sbjct: 450 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 509

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            FS+I+  +  +G   E   +   +++
Sbjct: 510 YFSSIINNLCKEGRVAEGKDIMDMMVQ 536



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 194/421 (46%), Gaps = 1/421 (0%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L D   + ++M  +   P+ H    LI    R   ++KA  + + M   G +PDT+T+  
Sbjct: 383 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 442

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++  LC+ G++  A+   + M   G  P    Y  +++   ++G+  +A     + + K 
Sbjct: 443 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 502

Query: 253 CPPYLITY-TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
            PP  + Y + +I  +CK+  +A   +++D M   G  P++VT+NSL+   C  G  ++A
Sbjct: 503 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 562

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             +++ + S G+EPN   Y TL+      G  D    +   M      PT   Y+I+++G
Sbjct: 563 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 622

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           L +      A   F++M+       I TY  VLG LC+    +EA  LL  L   +    
Sbjct: 623 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 682

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           +IT+N +I  + K G  ++A  L+  +   G+ P+  T+  +I    + +  EEA +L  
Sbjct: 683 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 742

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            + K G+   +     ++  L    +V  A   L ++  +    + +  S +    + +G
Sbjct: 743 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 802

Query: 552 M 552
           M
Sbjct: 803 M 803



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 184/388 (47%), Gaps = 2/388 (0%)

Query: 123 ILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           IL N  +R  + D + LI + M  +  IPD      +I  L RI R++ A      MV  
Sbjct: 407 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 466

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY-NTILRTMFDNGKFKQ 240
           G  P    Y  ++ G C  G++  A  L+ EM      P  + Y ++I+  +   G+  +
Sbjct: 467 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 526

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                   ++ G  P ++T+  L+E  C    +  A  +LD MA  G  P+   Y +LV+
Sbjct: 527 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 586

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+ DDA+ V  ++L +G++P S+ Y+ +LH L       A  K+   M E+  + 
Sbjct: 587 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 646

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           ++ TY +++ GLC+    D A     ++ + N + DI+T+N V+ A+ K G   EA +L 
Sbjct: 647 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 706

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++     P + TY+ +I  L K+   E+A  L+  + ++G + D      ++      
Sbjct: 707 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 766

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +V +A + L  IG+    +  S   L+
Sbjct: 767 AEVAKASNYLSIIGENNLTLEASTISLL 794



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 96/439 (21%), Positives = 194/439 (44%), Gaps = 3/439 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR--IEKASKVLQIM 178
           N  +      G+  +A  + D M  +   PD      ++ G        +     +  +M
Sbjct: 334 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 393

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+   +N+++    + G +  A+ + ++M   G  PD +T+ T++ ++   G+ 
Sbjct: 394 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 453

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY-NS 297
             A+  +   +  G PP    Y  LI+  C    + +A E++ +M  +   P  V Y +S
Sbjct: 454 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 513

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++N  CK+G+  +   +++ ++  G  PN +T+N+L+      G  +    +LD M    
Sbjct: 514 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 573

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P  + Y  L++G CK G +D A+  F  M+ K  +P  V Y+ +L  L +      A 
Sbjct: 574 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 633

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++ H +  S  +  + TY  ++ GL +  C ++A +L  ++    +  D IT   +I   
Sbjct: 634 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 693

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +  + +EA +L   I   G       Y ++I  L K +  + A  +   +  S +  D 
Sbjct: 694 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 753

Query: 538 TVFSTIVKKVADDGMTEEA 556
            + + IV+ + +     +A
Sbjct: 754 RLLNHIVRMLLNKAEVAKA 772



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 68/274 (24%), Positives = 134/274 (48%), Gaps = 1/274 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKA 171
           V   E     ++Q  C+ G+L  A +LI  M  ++   P   +  ++I  L +  R+ + 
Sbjct: 468 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 527

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             ++ +MV +G  P+ +T+N ++ G C  G +  A ALLD M+  G EP+   Y T++  
Sbjct: 528 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 587

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
              NG+   A+  ++D L KG  P  + Y+I++  + +      A ++  +M   G +  
Sbjct: 588 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 647

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           I TY  ++   C+    D+A +++  L +  ++ + IT+N ++ ++   G      ++ D
Sbjct: 648 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFD 707

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
            ++     P + TY+++I  L K    + A N F
Sbjct: 708 AISTYGLVPNIQTYSMMITNLIKEESYEEADNLF 741



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 136/296 (45%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           K  + I+ N C  G++ +   ++D+M +  Q P+     +L+ G   +  +E+A  +L  
Sbjct: 509 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 568

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+   Y  +V G CK G+I  A+ +  +M   G +P  + Y+ IL  +F   +
Sbjct: 569 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 628

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A   + + +  G    + TY +++  +C+      A  +L+ +       DI+T+N 
Sbjct: 629 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 688

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++   K G+  +A  + + + + G+ PN  TY+ ++ +L     ++  D +   + ++ 
Sbjct: 689 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 748

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           H+      N ++  L     V +A N  + +   N   +  T + +     +EGM+
Sbjct: 749 HASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 804


>gi|293333312|ref|NP_001168014.1| uncharacterized protein LOC100381738 [Zea mays]
 gi|223945505|gb|ACN26836.1| unknown [Zea mays]
          Length = 462

 Score =  192 bits (489), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 125/461 (27%), Positives = 227/461 (49%), Gaps = 43/461 (9%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N +L+  C   +   A +L+  M R +  P+       IR   +   +++A 
Sbjct: 3   VAPDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAV 62

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L+ M   G  PD I Y+ +V G  + G++  A+ LL+ M    C P+ + YN  L+ +
Sbjct: 63  ELLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGL 119

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G++++      + +RK CPP   T++ LI  +C+   +  A+EVL+ M   G  PD+
Sbjct: 120 CIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDV 179

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW-DAVDKILD 351
           V+YN++++    Q + DDA+ ++ ++L +   P++I++N +L  L     W DAV+ +  
Sbjct: 180 VSYNTIISCFSDQARADDALKLLKSMLCK---PDTISFNAVLKCLCKAKRWYDAVELVAK 236

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT------------ 399
           ++ +      + T+NILI+ LC+ G V  AI  F  M    C PDIVT            
Sbjct: 237 MLKKDCRINEM-TFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLINGFSEQG 295

Query: 400 --------------------YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
                               YN  L  LC     ++A +L+  +    C P  +T+N LI
Sbjct: 296 LDEMAFDLFRSMPCRADIFSYNATLKGLCMAARWDDAGELIADMVTEDCLPNEVTFNILI 355

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
             L +KG + +A+ +Y QM + GI+PD  T+  LI G+    ++++A+  L  +    + 
Sbjct: 356 SSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFLSTMPCEPDT 415

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
           +   +Y  ++ GLC++++   A +++  M+     P++  F
Sbjct: 416 I---SYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTF 453



 Score =  175 bits (443), Expect = 8e-41,   Method: Compositional matrix adjust.
 Identities = 106/351 (30%), Positives = 181/351 (51%), Gaps = 9/351 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  L+  C  G+  +  +LI  M R++  P+      LI  L +   +E A +VL+ M  
Sbjct: 113 NAALKGLCIAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQK 172

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G +PD ++YN ++     + +   A+ LL  M    C+PD I++N +L+ +    ++  
Sbjct: 173 YGYMPDVVSYNTIISCFSDQARADDALKLLKSML---CKPDTISFNAVLKCLCKAKRWYD 229

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+      L+K C    +T+ ILI+ +C+   +  AIEV + M    C PDIVTY+SL+N
Sbjct: 230 AVELVAKMLKKDCRINEMTFNILIDSLCQNGQVKDAIEVFELMPKYRCMPDIVTYSSLIN 289

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +QG  + A  +  ++  R    +  +YN  L  L     WD   +++  M      P
Sbjct: 290 GFSEQGLDEMAFDLFRSMPCRA---DIFSYNATLKGLCMAARWDDAGELIADMVTEDCLP 346

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+NILI+ LC+ GLV+RAI+ + QM      PDI TYN ++    ++G L++AL+ L
Sbjct: 347 NEVTFNILISSLCQKGLVNRAIDVYEQMPKYGITPDIFTYNALINGYSEQGRLDDALKFL 406

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             +    C P  I+YN+++ GL +    + A  L  +M+    +P+++T +
Sbjct: 407 STM---PCEPDTISYNSILKGLCRAERWKDAEKLVTEMLRKNCTPNEVTFK 454



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 58/206 (28%), Positives = 118/206 (57%), Gaps = 3/206 (1%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P  +TYN ++ GLC     ++A     +M+  +C P+ VT+ T + A C+ G+L+ A++
Sbjct: 4   APDTYTYNTVLKGLCCAKQWEQAEELMREMIRNSCHPNEVTFATQIRAFCQNGLLDRAVE 63

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +    C+P +I Y+TL++G ++ G +++A+ L   M+     P+ + +   + G C
Sbjct: 64  LLEQMPKYGCTPDVIIYSTLVNGFSEHGRVDEALKLLNTML---CRPNTVCYNAALKGLC 120

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
            A + EE  +L+ E+ ++     ++ +  +I+ LC+++ V+ A++VLE M    Y PD  
Sbjct: 121 IAGRWEEVGELIAEMVRKDCPPNDATFSTLINSLCQNRLVEYAVEVLEQMQKYGYMPDVV 180

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++TI+   +D    ++A KL + ++
Sbjct: 181 SYNTIISCFSDQARADDALKLLKSML 206


>gi|225441858|ref|XP_002278530.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g79540-like [Vitis vinifera]
          Length = 798

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 130/462 (28%), Positives = 217/462 (46%), Gaps = 13/462 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N IL     +     A  + + M + N  P+    + L+ GL +  + + A K+ 
Sbjct: 165 DVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGKTDDALKMF 224

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+T+ Y +++ GLC+  +      LL+ M VSGC PD IT N +L      
Sbjct: 225 DEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNALLDGFCKL 284

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A    +   ++G    +  Y+ LI+ + +        E    M   G  PD+V Y
Sbjct: 285 GQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAGIEPDVVLY 344

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L+   C+ G  D A+ ++N++  RG+ P++  YN L+      G  D    +   +++
Sbjct: 345 TILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKARSLQLEISK 404

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               PT  TY ILI G+C+ GL+D A   FNQM +  C P I+T+N ++  LCK G L E
Sbjct: 405 NDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGLCKAGELEE 464

Query: 416 ALQL-------------LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           A  L             L L  G+       +  T+++ L + G + KA  L  Q+ ++G
Sbjct: 465 ARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYKLLMQLADSG 524

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + PD +T+  LI GFC+A  +  A  L +E+  +G+   +  Y  +I G  +  + + A 
Sbjct: 525 VVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFHRVDREEDAF 584

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +VL+ M+ +   P   V+  ++      G    A+ LW K +
Sbjct: 585 RVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYL 626



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 114/463 (24%), Positives = 223/463 (48%), Gaps = 14/463 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L  FC  G++ +A  L+ +  +   +       +LI GL R  R ++  +  
Sbjct: 270 DSITCNALLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWC 329

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +G  PD + Y +++ G C+ G +  A+ +L++M+  G  PD   YN +++   D 
Sbjct: 330 RKMFKAGIEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDV 389

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   +A     +  +  C P   TYTILI  +C+   +  A ++ + M   GCSP I+T+
Sbjct: 390 GLLDKARSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTF 449

Query: 296 NSLVNFSCKQGKYDDAVLVINNL-----------LSRGMEP--NSITYNTLLHSLGSRGC 342
           N+L++  CK G+ ++A  +   +           LS+G +   ++ +  T++  L   G 
Sbjct: 450 NALIDGLCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGL 509

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                K+L  + ++   P + TYN+LING CK   ++ A   F ++  K   PD VTY T
Sbjct: 510 ILKAYKLLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGT 569

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++    +     +A ++L  +  + C+P    Y  L+    +KG +  A  L+ + + + 
Sbjct: 570 LIDGFHRVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSL 629

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
            S +D T +     F +  ++E+AV  L E+  + N    + Y + + GLC++++ + A+
Sbjct: 630 PSQEDETLKLAEEHFEKG-ELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEAL 688

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++  ++   +   +      ++  +  DG  E A  ++   +E
Sbjct: 689 KIFLVLKECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLE 731



 Score =  138 bits (348), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 91/376 (24%), Positives = 176/376 (46%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           +T+N+++  L K     +   +L+E+  S  +    T++ ++     +G  ++A+  +  
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
               GC P + TY  ++  + ++     A+ V + M     +P+  T+  L+N  CK GK
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            DDA+ + + +  +G+ PN++ Y  +L  L      D V ++L+ M  +   P   T N 
Sbjct: 217 TDDALKMFDEMTQKGIPPNTMIYTIILSGLCQAKRTDDVHRLLNTMKVSGCCPDSITCNA 276

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           L++G CK G +D A         +     I  Y++++  L +    +E  +    +  + 
Sbjct: 277 LLDGFCKLGQIDEAFALLQLFEKEGYVLGIKGYSSLIDGLFRAKRYDEVQEWCRKMFKAG 336

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P ++ Y  LI G  + G ++ A+ +   M + G+SPD   +  LI GFC    +++A 
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPDTYCYNALIKGFCDVGLLDKAR 396

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L  EI K      +  Y ++I G+C++  +D A Q+   M +    P    F+ ++  +
Sbjct: 397 SLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDGL 456

Query: 548 ADDGMTEEAYKLWQKL 563
              G  EEA  L+ K+
Sbjct: 457 CKAGELEEARHLFYKM 472



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 101/445 (22%), Positives = 205/445 (46%), Gaps = 16/445 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           +E D      +++ FC  G +  A  +++ M +R   PD  +C N LI+G   +  ++KA
Sbjct: 337 IEPDVVLYTILIRGFCEVGMVDYALNMLNDMTQRGLSPD-TYCYNALIKGFCDVGLLDKA 395

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +   +  +   P + TY +++ G+C+ G +  A  + ++M   GC P ++T+N ++  
Sbjct: 396 RSLQLEISKNDCFPTSCTYTILICGMCRNGLLDEARQIFNQMENLGCSPSIMTFNALIDG 455

Query: 232 MFDNGKFKQAIG-FWKDQLRKGCPPYL------------ITYTILIEQVCKQCGIARAIE 278
           +   G+ ++A   F+K ++ K    +L             +   ++E++C+   I +A +
Sbjct: 456 LCKAGELEEARHLFYKMEIGKNPSLFLRLSQGADRVMDTASLQTMVERLCESGLILKAYK 515

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           +L  +A  G  PDI+TYN L+N  CK    + A  +   L  +G  P+S+TY TL+    
Sbjct: 516 LLMQLADSGVVPDIMTYNVLINGFCKAKNINGAFKLFRELQLKGHSPDSVTYGTLIDGFH 575

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
                +   ++LD M +   +P+   Y  L+   C+ G +  A + + + +      +  
Sbjct: 576 RVDREEDAFRVLDQMVKNGCTPSSAVYKCLMTWSCRKGKLSVAFSLWLKYLRSLPSQEDE 635

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           T         ++G L +A++ L  +N    +  +  Y   + GL +    E+A+ ++  +
Sbjct: 636 TLKLAEEHF-EKGELEKAVRCLLEMNFKLNNFEIAPYTIWLIGLCQARRSEEALKIFLVL 694

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
            E  +  +  +   LI G C+   +E AVD+     ++G  +       ++  L    K+
Sbjct: 695 KECQMDVNPPSCVMLINGLCKDGNLEMAVDIFLYTLEKGFMLMPRICNQLLRSLILQDKM 754

Query: 519 DMAIQVLELMISSRYKPDDTVFSTI 543
             A+ +L  M S+ Y  D+ +   I
Sbjct: 755 KHALDLLNRMNSAGYDLDEYLHHRI 779



 Score = 47.8 bits (112), Expect = 0.014,   Method: Compositional matrix adjust.
 Identities = 28/133 (21%), Positives = 63/133 (47%)

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           +T+N +ID LAK    +    +  ++  + I     T   LI  + ++   E+AV+   +
Sbjct: 97  VTHNLVIDMLAKDDGFDTYWKILEELKNSNIQIPPPTFSVLIAAYAKSGMAEKAVESFGK 156

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +   G K     Y  ++H + + +   +A+ V   M+   Y P+   F  ++  +  +G 
Sbjct: 157 MKDFGCKPDVFTYNSILHVMVQKEVFLLALAVYNQMLKLNYNPNRATFVILLNGLCKNGK 216

Query: 553 TEEAYKLWQKLIE 565
           T++A K++ ++ +
Sbjct: 217 TDDALKMFDEMTQ 229


>gi|414881814|tpg|DAA58945.1| TPA: hypothetical protein ZEAMMB73_003881 [Zea mays]
          Length = 792

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 204/417 (48%), Gaps = 1/417 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I+GL+R  R + A  +L+ +V+  GVPD  TY  ++  LCK  ++  A+ L D+M  +G
Sbjct: 367 VIKGLLRDKRWKDAIGLLE-LVVDTGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAG 425

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +P ++TY+++L    + G+  +A+  + +   KG PP  +TYT L++   K+     A 
Sbjct: 426 VKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAY 485

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +L++M   G S    TYN L+N      +  +   ++   LS G  P ++TYN++++  
Sbjct: 486 ALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGF 545

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G   +   +   M +   +P + TY   I+G C+    D A+     +     QPDI
Sbjct: 546 VKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDI 605

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
             YN  +   CK+G ++ AL  L LL     +P +  YN+ + G      M +A   Y  
Sbjct: 606 AAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYS 665

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M++  +  D   + TLI GF +   V  A++L  E+        +  +  + HGLC+S  
Sbjct: 666 MIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGD 725

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +D A ++L+ M      P+   ++ ++     DG  +EA++L  +++   V    TT
Sbjct: 726 IDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTT 782



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 123/507 (24%), Positives = 225/507 (44%), Gaps = 43/507 (8%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI---PDFHFCINLIRGLIRID 166
           G  V+ DE+     +   C   KL DA + + ++ +  +    P      +++  L+++ 
Sbjct: 213 GAGVKPDERVYAITISGLC---KLRDADRALQVLGKMREAGFEPWELTYSSVVDVLVKVG 269

Query: 167 RIEKASKVL-QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           R+++A ++  Q+++ +G   D +   M++ G C  G++  A+ L DE+   G  P  +TY
Sbjct: 270 RMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGVTPTNVTY 329

Query: 226 NTIL----------------RTMFDNG-------------------KFKQAIGFWKDQLR 250
             ++                R M + G                   ++K AIG  +  + 
Sbjct: 330 GVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIGLLELVVD 389

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G P  + TY  LI  +CK   +  A+ + D M   G  P IVTY+SL+   C++G+ D+
Sbjct: 390 TGVPD-VFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDE 448

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ + + +  +G  PN +TY TL+     +  +D    +L+ M +   S   +TYNILIN
Sbjct: 449 ALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILIN 508

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           GL     V        + +S+   P  +TYN+++    K GM+  A  +   +     +P
Sbjct: 509 GLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITP 568

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            ++TY + IDG  +  C + A+ L   +  +GI PD   +   I  FC+   +  A+  L
Sbjct: 569 NIVTYTSFIDGYCRTNCCDLAVKLLIYVRRDGIQPDIAAYNAFIDTFCKQGNMSRALHFL 628

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
             + K G     + Y   + G    K +  A +    MI  R   D  +++T++   +  
Sbjct: 629 VLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYSMIKQRVVADTEIYTTLIDGFSKV 688

Query: 551 GMTEEAYKLWQKLIEWKVFEKGTTLLA 577
           G    A +L+ +++   V     T  A
Sbjct: 689 GNVAFALELYSEMMANHVIPDDKTFTA 715



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 139/556 (25%), Positives = 249/556 (44%), Gaps = 32/556 (5%)

Query: 7   PPNSIIELHCLP-NLQWCSRQVSLQHGVVNNHRTQFYSQLRDLGAG-----------RNV 54
           PP S ++    P + Q+     +  HGV ++      S LR L A            R+ 
Sbjct: 36  PPQSAVQ----PLSTQFARPSPARGHGVADD----LASSLRALLASSPTVQHAFHLLRSA 87

Query: 55  SLKCRGLPGNVCIDRV-NEVDQDEWSSE---SHVLAVNKKLRGLTITKKSHDPSLPSSDG 110
           +L  R LP N  +D V + VD    ++    SHVL    +         +    + +   
Sbjct: 88  ALDTR-LPPNELVDAVLSTVDAGSPAAVTLLSHVLTCLSRAASDCAAAAAAYSRMVTRG- 145

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
             V  D K+   +L          DA  L D M  +    D      +IR  +R      
Sbjct: 146 --VVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGMHCD 203

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A ++   M  +G  PD   Y + + GLCK      A+ +L +M  +G EP  +TY++++ 
Sbjct: 204 AVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTYSSVVD 263

Query: 231 TMFDNGKFKQAIGFWKDQ--LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
            +   G+  +A+   KDQ  L  G    ++  T+L+   C    + +A+++ D++  +G 
Sbjct: 264 VLVKVGRMDEALRL-KDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVVSDGV 322

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P  VTY  L+     +G  D+   +   ++ +G+  ++  +N ++  L     W     
Sbjct: 323 TPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWKDAIG 382

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L+++ + +  P VFTY  LI+ LCK+  +  A+N +++M     +P IVTY+++L   C
Sbjct: 383 LLELVVD-TGVPDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYC 441

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           ++G ++EAL+L   +      P  +TY TL+ G  KK   + A  L  +M +NG+S  D 
Sbjct: 442 EKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDY 501

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+  LI G    ++V E  ++LK     G       Y  +I+G  K+  +  A  +   M
Sbjct: 502 TYNILINGLYMVNRVCEVDEMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQM 561

Query: 529 ISSRYKPDDTVFSTIV 544
                 P+   +++ +
Sbjct: 562 RKKGITPNIVTYTSFI 577



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 181/423 (42%), Gaps = 35/423 (8%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C   KL +A  L D M      P      +L+ G     R+++A K+   M   G
Sbjct: 401 LIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLLLGYCEKGRMDEALKLYSEMPDKG 460

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TY  ++ G  K+    +A ALL+EM  +G      TYN ++  ++   +  +  
Sbjct: 461 FPPNEVTYTTLMKGYIKKKAFDNAYALLNEMRQNGVSCGDYTYNILINGLYMVNRVCEVD 520

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              K  L +G  P  +TY  +I    K   +  A  +   M  +G +P+IVTY S ++  
Sbjct: 521 EMLKRFLSEGFVPTTMTYNSIINGFVKAGMMGSAFGMYRQMRKKGITPNIVTYTSFIDGY 580

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+    D AV ++  +   G++P+                                   +
Sbjct: 581 CRTNCCDLAVKLLIYVRRDGIQPD-----------------------------------I 605

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             YN  I+  CK G + RA++    ++     PD+  YN+ +       M+ EA +  + 
Sbjct: 606 AAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEASKFYYS 665

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +           Y TLIDG +K G +  A+ LY +MM N + PDD T   L  G CR+  
Sbjct: 666 MIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGD 725

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++ A  LL ++ +         Y ++I+   +  K+  A Q+ + M+SS   PDDT +  
Sbjct: 726 IDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDI 785

Query: 543 IVK 545
           + +
Sbjct: 786 LPR 788



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 88/354 (24%), Positives = 164/354 (46%), Gaps = 4/354 (1%)

Query: 212 EMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
            M   G  PD  +   +L T         A+  + +   KGC      Y ++I + C + 
Sbjct: 140 RMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVI-RACVRG 198

Query: 272 GI-ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           G+   A+ + D+MA  G  PD   Y   ++  CK    D A+ V+  +   G EP  +TY
Sbjct: 199 GMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPT-VFTYNILINGLCKYGLVDRAINSFNQMV 389
           ++++  L   G  D   ++ D M  A+     V    +L++G C +G V +A++ F+++V
Sbjct: 259 SSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEVV 318

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
           S    P  VTY  ++     EGM +E  +L   +           +N +I GL +    +
Sbjct: 319 SDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRWK 378

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A+ L   +++ G+ PD  T+  LI   C+  ++ EAV+L  ++ + G K     Y  ++
Sbjct: 379 DAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSLL 437

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            G C+  ++D A+++   M    + P++  ++T++K        + AY L  ++
Sbjct: 438 LGYCEKGRMDEALKLYSEMPDKGFPPNEVTYTTLMKGYIKKKAFDNAYALLNEM 491



 Score =  106 bits (264), Expect = 4e-20,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 147/320 (45%), Gaps = 2/320 (0%)

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           +   + +G  P   + T L+    +    A A+ + D+M  +GC  D   Y+ ++    +
Sbjct: 138 YSRMVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVR 197

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            G + DAV + + +   G++P+   Y   +  L      D   ++L  M EA   P   T
Sbjct: 198 GGMHCDAVRLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELT 257

Query: 365 YNILINGLCKYGLVDRAINSFNQM-VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           Y+ +++ L K G +D A+   +QM ++   + D+V    ++   C  G + +AL L   +
Sbjct: 258 YSSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLATMLMHGYCLHGEVGKALDLFDEV 317

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                +P  +TY  LI G   +G  ++   L  QM+E G+         +I G  R  + 
Sbjct: 318 VSDGVTPTNVTYGVLIKGCDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDKRW 377

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           ++A+ LL+ +   G       Y  +IH LCK +K+  A+ + + M  +  KP    + ++
Sbjct: 378 KDAIGLLELVVDTGVP-DVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGVKPSIVTYHSL 436

Query: 544 VKKVADDGMTEEAYKLWQKL 563
           +    + G  +EA KL+ ++
Sbjct: 437 LLGYCEKGRMDEALKLYSEM 456



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 81/292 (27%), Positives = 144/292 (49%), Gaps = 12/292 (4%)

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--GSR 340
           M   G  PD  +   L+  + +     DA+ + + +  +G   ++  Y+ ++ +   G  
Sbjct: 141 MVTRGVVPDAKSRTDLLVTTARGASAADALTLFDEMRGKGCYADAKMYDVVIRACVRGGM 200

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
            C DAV ++ D M  A   P    Y I I+GLCK    DRA+    +M     +P  +TY
Sbjct: 201 HC-DAV-RLFDEMAGAGVKPDERVYAITISGLCKLRDADRALQVLGKMREAGFEPWELTY 258

Query: 401 NTVLGALCKEGMLNEALQL---LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           ++V+  L K G ++EAL+L   + L  G      L T   L+ G    G + KA+ L+ +
Sbjct: 259 SSVVDVLVKVGRMDEALRLKDQMLLATGKKMDVVLAT--MLMHGYCLHGEVGKALDLFDE 316

Query: 458 MMENGISPDDITHRTLIWGFCRADQV-EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           ++ +G++P ++T+  LI G C A+ + +E   L +++ ++G  +    + LVI GL + K
Sbjct: 317 VVSDGVTPTNVTYGVLIKG-CDAEGMSDETYKLCRQMIEQGLLLSTYEFNLVIKGLLRDK 375

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +   AI +LEL++ +   PD   +  ++  +       EA  LW K+ E  V
Sbjct: 376 RWKDAIGLLELVVDTGV-PDVFTYGCLIHWLCKHQKLHEAVNLWDKMKEAGV 426



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 45/186 (24%), Positives = 79/186 (42%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D    N  +  FC +G ++ A   + ++ +    PD     + + G   +  + +AS
Sbjct: 601 IQPDIAAYNAFIDTFCKQGNMSRALHFLVLLLKDGLTPDVTVYNSFVTGYKNLKMMAEAS 660

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K    M+    V DT  Y  ++ G  K G +  A+ L  EM  +   PD  T+  +   +
Sbjct: 661 KFYYSMIKQRVVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGL 720

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G    A     D  R    P ++TY +LI    +   +  A ++ D+M   G  PD 
Sbjct: 721 CRSGDIDGAKRLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDD 780

Query: 293 VTYNSL 298
            TY+ L
Sbjct: 781 TTYDIL 786



 Score = 58.5 bits (140), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 37/119 (31%), Positives = 56/119 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D +    ++  F   G +  A +L   M   + IPD      L  GL R   I+ A 
Sbjct: 671 VVADTEIYTTLIDGFSKVGNVAFALELYSEMMANHVIPDDKTFTALTHGLCRSGDIDGAK 730

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           ++L  M      P+ +TYNM++    + G+++ A  L DEM  SG  PD  TY+ + RT
Sbjct: 731 RLLDDMRRLDVSPNIVTYNMLINACVRDGKLQEAFQLHDEMLSSGVVPDDTTYDILPRT 789


>gi|222628664|gb|EEE60796.1| hypothetical protein OsJ_14385 [Oryza sativa Japonica Group]
          Length = 808

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 229/451 (50%), Gaps = 3/451 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I++  C   ++  A  ++  M      PD      +I GL +   ++KA +VL+ MV 
Sbjct: 173 NSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 232

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P++ITYN ++ G    G    ++ +  +MS  G  P V   N+ +  +F +G+  +
Sbjct: 233 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 292

Query: 241 AIGFWKDQLRKGCPPYLITYTILIE--QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           A   +   + KG  P +I+Y+ ++          +A    + + M  +G +P+   +N L
Sbjct: 293 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 352

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   + G  D A+L+  ++ ++GM P+++T+ T++ SL   G  D      + M +   
Sbjct: 353 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 412

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY-NTVLGALCKEGMLNEAL 417
            P+   Y  LI G C +G + +A    ++M++K+  P  V Y ++++  LCKEG + E  
Sbjct: 413 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 472

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            ++ ++  +   P ++T+N+L++G    G ME+A  L   M   GI P+   + TL+ G+
Sbjct: 473 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 532

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  ++++A+ + +++  +G K  +  Y +++HGL ++++   A ++   MI S      
Sbjct: 533 CKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSI 592

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +  ++  +  +  T+EA  L +KL    V
Sbjct: 593 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 623



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 224/456 (49%), Gaps = 8/456 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   G++  A  L   M  +  +P    C ++I+ L ++  ++KA  ++Q MV SG
Sbjct: 140 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 199

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY++++ GLCK   +  A  +L++M  +G  P+ ITYN+++     +G + +++
Sbjct: 200 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 259

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN-- 300
             +K     G  P +      I  + K      A  + D M ++G  PDI++Y+++++  
Sbjct: 260 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 319

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
            +       D   + N +L++G+ PN   +N L+++    G  D    I + M      P
Sbjct: 320 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 379

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+  +I+ LC+ G +D A++ FN MV     P    Y  ++   C  G L +A +L+
Sbjct: 380 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 439

Query: 421 -HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
             ++N     P +  ++++I+ L K+G + +   +   M++ G  P+ +T  +L+ G+C 
Sbjct: 440 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 499

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              +EEA  LL  +   G +     Y  ++ G CK+ ++D A+ V   M+    KP   +
Sbjct: 500 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 559

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +S I+  +     T  A K++ ++I     E GTT+
Sbjct: 560 YSIILHGLFQARRTTAAKKMFHEMI-----ESGTTV 590



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 193/387 (49%), Gaps = 9/387 (2%)

Query: 185 PDTI-TYNMMVGGLCKRGQIRS--AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           P TI TYN+++   C R   R    +A++  +  +G  PD  +Y+ I   + D G+  +A
Sbjct: 97  PPTIHTYNILID--CYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD-GEVDKA 153

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              + + + +G  P ++    +I+++CK   + +A  ++  M   G +PD+ TY+ +++ 
Sbjct: 154 HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 213

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK    D A  V+  ++  G  PNSITYN+L+H     G W+   ++   M+     PT
Sbjct: 214 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 273

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG--ALCKEGMLNEALQL 419
           V   N  I+ L K+G  + A   F+ MV K  +PDI++Y+T+L   A   +  L +   +
Sbjct: 274 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 333

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            +L+     +P    +N LI+  A+ G M+KAM+++  M   G+ PD +T  T+I   CR
Sbjct: 334 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 393

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT- 538
             ++++A+     +   G     + Y  +I G C   ++  A +++  M++    P    
Sbjct: 394 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 453

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            FS+I+  +  +G   E   +   +++
Sbjct: 454 YFSSIINNLCKEGRVAEGKDIMDMMVQ 480



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 104/421 (24%), Positives = 194/421 (46%), Gaps = 1/421 (0%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L D   + ++M  +   P+ H    LI    R   ++KA  + + M   G +PDT+T+  
Sbjct: 327 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 386

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++  LC+ G++  A+   + M   G  P    Y  +++   ++G+  +A     + + K 
Sbjct: 387 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 446

Query: 253 CPPYLITY-TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
            PP  + Y + +I  +CK+  +A   +++D M   G  P++VT+NSL+   C  G  ++A
Sbjct: 447 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 506

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             +++ + S G+EPN   Y TL+      G  D    +   M      PT   Y+I+++G
Sbjct: 507 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 566

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           L +      A   F++M+       I TY  VLG LC+    +EA  LL  L   +    
Sbjct: 567 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 626

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           +IT+N +I  + K G  ++A  L+  +   G+ P+  T+  +I    + +  EEA +L  
Sbjct: 627 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 686

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            + K G+   +     ++  L    +V  A   L ++  +    + +  S +    + +G
Sbjct: 687 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 746

Query: 552 M 552
           M
Sbjct: 747 M 747



 Score =  153 bits (386), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 105/388 (27%), Positives = 184/388 (47%), Gaps = 2/388 (0%)

Query: 123 ILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           IL N  +R  + D + LI + M  +  IPD      +I  L RI R++ A      MV  
Sbjct: 351 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 410

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY-NTILRTMFDNGKFKQ 240
           G  P    Y  ++ G C  G++  A  L+ EM      P  + Y ++I+  +   G+  +
Sbjct: 411 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 470

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                   ++ G  P ++T+  L+E  C    +  A  +LD MA  G  P+   Y +LV+
Sbjct: 471 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 530

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+ DDA+ V  ++L +G++P S+ Y+ +LH L       A  K+   M E+  + 
Sbjct: 531 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 590

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           ++ TY +++ GLC+    D A     ++ + N + DI+T+N V+ A+ K G   EA +L 
Sbjct: 591 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 650

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++     P + TY+ +I  L K+   E+A  L+  + ++G + D      ++      
Sbjct: 651 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 710

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +V +A + L  IG+    +  S   L+
Sbjct: 711 AEVAKASNYLSIIGENNLTLEASTISLL 738



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/439 (21%), Positives = 194/439 (44%), Gaps = 3/439 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR--IEKASKVLQIM 178
           N  +      G+  +A  + D M  +   PD      ++ G        +     +  +M
Sbjct: 278 NSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLM 337

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  P+   +N+++    + G +  A+ + ++M   G  PD +T+ T++ ++   G+ 
Sbjct: 338 LTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRL 397

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY-NS 297
             A+  +   +  G PP    Y  LI+  C    + +A E++ +M  +   P  V Y +S
Sbjct: 398 DDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSS 457

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++N  CK+G+  +   +++ ++  G  PN +T+N+L+      G  +    +LD M    
Sbjct: 458 IINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIG 517

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P  + Y  L++G CK G +D A+  F  M+ K  +P  V Y+ +L  L +      A 
Sbjct: 518 IEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAK 577

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++ H +  S  +  + TY  ++ GL +  C ++A +L  ++    +  D IT   +I   
Sbjct: 578 KMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAM 637

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            +  + +EA +L   I   G       Y ++I  L K +  + A  +   +  S +  D 
Sbjct: 638 FKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDS 697

Query: 538 TVFSTIVKKVADDGMTEEA 556
            + + IV+ + +     +A
Sbjct: 698 RLLNHIVRMLLNKAEVAKA 716



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 74/328 (22%), Positives = 157/328 (47%), Gaps = 1/328 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           ++Q  C+ G+L  A +LI  M  ++   P   +  ++I  L +  R+ +   ++ +MV +
Sbjct: 422 LIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQT 481

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P+ +T+N ++ G C  G +  A ALLD M+  G EP+   Y T++     NG+   A
Sbjct: 482 GQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDA 541

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +  ++D L KG  P  + Y+I++  + +      A ++  +M   G +  I TY  ++  
Sbjct: 542 LTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGG 601

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+    D+A +++  L +  ++ + IT+N ++ ++   G      ++ D ++     P 
Sbjct: 602 LCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELFDAISTYGLVPN 661

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + TY+++I  L K    + A N F  +       D    N ++  L  +  + +A   L 
Sbjct: 662 IQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLS 721

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCME 449
           ++  ++ +    T + L    +++G ++
Sbjct: 722 IIGENNLTLEASTISLLASLFSREGMIK 749



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 64/296 (21%), Positives = 136/296 (45%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           K  + I+ N C  G++ +   ++D+M +  Q P+     +L+ G   +  +E+A  +L  
Sbjct: 453 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 512

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+   Y  +V G CK G+I  A+ +  +M   G +P  + Y+ IL  +F   +
Sbjct: 513 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 572

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A   + + +  G    + TY +++  +C+      A  +L+ +       DI+T+N 
Sbjct: 573 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 632

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           +++   K G+  +A  + + + + G+ PN  TY+ ++ +L     ++  D +   + ++ 
Sbjct: 633 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 692

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           H+      N ++  L     V +A N  + +   N   +  T + +     +EGM+
Sbjct: 693 HASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGMI 748


>gi|225424625|ref|XP_002282301.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial [Vitis vinifera]
 gi|296081374|emb|CBI16807.3| unnamed protein product [Vitis vinifera]
          Length = 519

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 125/425 (29%), Positives = 201/425 (47%), Gaps = 35/425 (8%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
            I GL ++       K+L+ M   G VPD   YN+ +  LC   Q+  A+ ++  M   G
Sbjct: 85  FISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALGVVQTMVEKG 144

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP---------------------Y 256
            EPD++TY  ++  +   G+F  A+  W++ +RKG  P                     Y
Sbjct: 145 REPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLCHDGKVDLAY 204

Query: 257 LIT--------------YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            +T              Y  LI   C+   I +A  ++  M   GC PD+VTYN L+N+ 
Sbjct: 205 ELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEPDLVTYNVLLNYC 264

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +   ++A  ++  +   G+EP+  +YN LL  L      D    ++    EA     V
Sbjct: 265 CDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDV 324

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            +YN +I  LC      RA   F +M  K   PD+VT+  ++ A  +EG  N A +LL  
Sbjct: 325 VSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQ 384

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           + G    P  + Y T++D L K G M  A  ++  M+E+GI+PD +++  LI G CRA +
Sbjct: 385 MTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASR 444

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           V EA+ L +++   G       ++L+I GL   KK+ +A +V + M+   +  D  V  T
Sbjct: 445 VSEAMHLYEDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSET 504

Query: 543 IVKKV 547
           +V  +
Sbjct: 505 LVNAI 509



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 110/410 (26%), Positives = 190/410 (46%), Gaps = 6/410 (1%)

Query: 159 IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
           I   ++   I++A K    M  S     +I YN  +G L ++ +   A    D M   G 
Sbjct: 16  ISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDRMIPQGF 75

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
             +  TY+  +  +     F       +D  R G  P +  Y I +  +C +  +  A+ 
Sbjct: 76  SLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQLDVALG 135

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           V+  M  +G  PDIVTY  ++N  C+ G++D AV +  N++ +G  P+      L+  L 
Sbjct: 136 VVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRALVLGLC 195

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFT---YNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
             G    VD   ++   A      F+   YN LING C+ G +D+A +  + M    C+P
Sbjct: 196 HDG---KVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNGCEP 252

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D+VTYN +L   C E +L EA  L+  +  S   P + +YN L+ GL K   ++KA ++ 
Sbjct: 253 DLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYMMM 312

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
              ME     D +++ T+I   C A   + A  L +E+G +G       + ++I    + 
Sbjct: 313 VNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFLRE 372

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              ++A ++L+ M      PD  +++TIV  +   G    A+ ++  ++E
Sbjct: 373 GSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVE 422



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 86/341 (25%), Positives = 159/341 (46%), Gaps = 35/341 (10%)

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           + Y   I    K   I +A++  D+M    C    + YN  +    +Q ++D A    + 
Sbjct: 10  LAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRFDLAEQYYDR 69

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           ++ +G   NS TY+  +  L     +  ++K+L+ M+   + P ++ YNI +N LC    
Sbjct: 70  MIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIYLNLLCCENQ 129

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP------C 431
           +D A+     MV K  +PDIVTY  V+  LC+ G  + A+++   +     SP       
Sbjct: 130 LDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGFSPDEKACRA 189

Query: 432 LI-----------------------------TYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           L+                              YN+LI+G  + G ++KA  +   M  NG
Sbjct: 190 LVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKAQSIISFMRRNG 249

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             PD +T+  L+   C    +EEA +L+K++ + G +    +Y  ++ GLCK+ ++D A 
Sbjct: 250 CEPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAY 309

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            ++   + ++   D   ++TI+K +     T+ AYKL++++
Sbjct: 310 MMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEM 350



 Score =  102 bits (255), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/224 (26%), Positives = 110/224 (49%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N +L   C    L +A  L+  M R    PD +    L++GL + +R++KA  
Sbjct: 251 EPDLVTYNVLLNYCCDELLLEEAENLMKKMERSGVEPDVYSYNELLKGLCKANRLDKAYM 310

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           ++   + + G+ D ++YN ++  LC     + A  L +EM   G  PDV+T+  +++   
Sbjct: 311 MMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAYKLFEEMGGKGITPDVVTFTILIKAFL 370

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G    A          G  P  + YT +++ +CK   +  A  V  DM   G +PD+V
Sbjct: 371 REGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVV 430

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +YN+L+N  C+  +  +A+ +  ++ + G  P+ +T+  ++  L
Sbjct: 431 SYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLIIGGL 474



 Score = 87.8 bits (216), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 55/227 (24%), Positives = 105/227 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  + N++L+  C   +L  A  ++        + D      +I+ L      ++A 
Sbjct: 285 VEPDVYSYNELLKGLCKANRLDKAYMMMVNKMEAKGLCDVVSYNTIIKALCTASHTKRAY 344

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+ + M   G  PD +T+ +++    + G    A  LLD+M+  G  PD + Y TI+  +
Sbjct: 345 KLFEEMGGKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHL 404

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              GK   A   + D +  G  P +++Y  LI  +C+   ++ A+ + +DM   G  PD 
Sbjct: 405 CKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDE 464

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           VT+  ++     + K   A  V + ++ +G   +     TL++++ S
Sbjct: 465 VTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAIHS 511



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/238 (22%), Positives = 109/238 (45%)

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           + R +  + + Y   + S    G  D   K  D M +++       YN  I  L +    
Sbjct: 1   MYRSLGRHRLAYRAQISSYVKAGLIDQALKTFDEMTKSNCRVFSIDYNRFIGVLVRQSRF 60

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A   +++M+ +    +  TY+  +  LCK        +LL  ++     P +  YN  
Sbjct: 61  DLAEQYYDRMIPQGFSLNSFTYSRFISGLCKVKNFVLIEKLLEDMDRLGYVPDIWAYNIY 120

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           ++ L  +  ++ A+ +   M+E G  PD +T+  +I G CRA + + AV++ + + ++G 
Sbjct: 121 LNLLCCENQLDVALGVVQTMVEKGREPDIVTYTIVINGLCRAGRFDSAVEIWRNMVRKGF 180

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                A R ++ GLC   KVD+A ++    +  R K   +++++++      G  ++A
Sbjct: 181 SPDEKACRALVLGLCHDGKVDLAYELTVGAMRGRIKFSKSIYNSLINGFCQAGWIDKA 238



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/143 (27%), Positives = 65/143 (45%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D  T   +++ F   G    A KL+D M     +PD      ++  L +  ++ 
Sbjct: 352 GKGITPDVVTFTILIKAFLREGSSNIAKKLLDQMTGLGLLPDRVLYTTIVDHLCKTGKMG 411

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A  V   MV SG  PD ++YN ++ GLC+  ++  A+ L ++M   G  PD +T+  I+
Sbjct: 412 MAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLYEDMHTGGPCPDEVTFKLII 471

Query: 230 RTMFDNGKFKQAIGFWKDQLRKG 252
             +    K   A   W   + KG
Sbjct: 472 GGLIWEKKLSVACRVWDQMMEKG 494



 Score = 48.1 bits (113), Expect = 0.012,   Method: Compositional matrix adjust.
 Identities = 31/120 (25%), Positives = 51/120 (42%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D      I+ + C  GK+  A  +   M      PD      LI GL R  R+ +A  + 
Sbjct: 393 DRVLYTTIVDHLCKTGKMGMAHSVFCDMVESGITPDVVSYNALINGLCRASRVSEAMHLY 452

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  PD +T+ +++GGL    ++  A  + D+M   G   D     T++  +  N
Sbjct: 453 EDMHTGGPCPDEVTFKLIIGGLIWEKKLSVACRVWDQMMEKGFTLDGAVSETLVNAIHSN 512


>gi|356524676|ref|XP_003530954.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g12700, mitochondrial-like
           [Glycine max]
          Length = 555

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 219/479 (45%), Gaps = 34/479 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +K+L      G    A  L   +  +   P       LI        +  A  +L  ++ 
Sbjct: 59  DKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSLLGTILK 118

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +T+N ++ G C  G +  A+A   ++   G   D  +Y +++  +  NG+ + 
Sbjct: 119 MGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCKNGQTRD 178

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+   +        P LITY+ +I+ +CK   IA A+ +   +   G   D+V YNSL++
Sbjct: 179 ALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVAYNSLIH 238

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C  G++ +A  ++  ++   + P+  T+N L+ +L   G       +  +M +    P
Sbjct: 239 GCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKP 298

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + TYN L+ G C    V  A   FN+MV +  +PD++ YN ++   CK  M++EA+ L 
Sbjct: 299 DIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLF 358

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +   +  P L TYN+LIDGL K G M     L  +M + G SPD +T+   +  FC++
Sbjct: 359 KEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKS 418

Query: 481 DQVEEAVDLLKEIGK-----------------RGNKMRNS-----------------AYR 506
              E+A+ L ++I +                 +G K++ +                  Y 
Sbjct: 419 KPYEKAISLFRQIVQGIWPDFYMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYT 478

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           ++I+ LCK    D A+ +L  M  +   PD   F TI+  + +   T++A KL  ++IE
Sbjct: 479 IMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIGALQERNETDKAEKLRLEMIE 537



 Score =  186 bits (471), Expect = 4e-44,   Method: Compositional matrix adjust.
 Identities = 114/393 (29%), Positives = 192/393 (48%), Gaps = 3/393 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE +   ++   C  G+  DA +L+  M      P+      +I GL +   I  A ++ 
Sbjct: 159 DEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLF 218

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            ++   G + D + YN ++ G C  GQ R A  LL  M      PD  T+N ++  +   
Sbjct: 219 SLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKE 278

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+  +A G +   +++G  P ++TY  L+E  C    ++ A E+ + M   G  PD++ Y
Sbjct: 279 GRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVKRGLEPDVLNY 338

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+N  CK    D+A+++   +  + + PN  TYN+L+  L   G    V +++D M +
Sbjct: 339 NVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGLCKLGRMSCVQELVDEMCD 398

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              SP + TYNI ++  CK    ++AI+ F Q+V +   PD   Y+ ++   CK   L  
Sbjct: 399 RGQSPDIVTYNIFLDAFCKSKPYEKAISLFRQIV-QGIWPDFYMYDVIVENFCKGEKLKI 457

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A + L  L    C P + TY  +I+ L K    ++AM L  +M +N   PD +T  T+I 
Sbjct: 458 AEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSKMDDNDCPPDAVTFETIIG 517

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
                ++ ++A  L  E+ +RG  + N   RLV
Sbjct: 518 ALQERNETDKAEKLRLEMIERG--LVNDEARLV 548



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 73/276 (26%), Positives = 134/276 (48%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P I  ++ L+    + G Y  A+ + + L S+G+ P+  T   L++    +        +
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           L  + +    P + T+N LING C  G+V +A+     +++K    D  +Y +++  LCK
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK 172

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G   +ALQLL  +      P LITY+T+IDGL K   +  A+ L+  +   GI  D + 
Sbjct: 173 NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVA 232

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +LI G C   Q  EA  LL  + +      +  + +++  LCK  ++  A  V  +M+
Sbjct: 233 YNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALCKEGRIVEAQGVFAVMM 292

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               KPD   ++ +++         EA +L+ ++++
Sbjct: 293 KRGEKPDIVTYNALMEGFCLSNNVSEARELFNRMVK 328



 Score =  114 bits (286), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 67/257 (26%), Positives = 125/257 (48%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           DD +L  N +L +   P    ++ LL ++   G +     +   ++    +P++ T  IL
Sbjct: 37  DDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTIL 96

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           IN  C    +  A +    ++    QP++VT+NT++   C  GM+++A+     L     
Sbjct: 97  INCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGY 156

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
                +Y +LI+GL K G    A+ L  +M E+ + P+ IT+ T+I G C+   + +A+ 
Sbjct: 157 PLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALR 216

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           L   +  RG  +   AY  +IHG C   +   A ++L +M+     PDD  F+ +V  + 
Sbjct: 217 LFSLVTSRGILVDVVAYNSLIHGCCSVGQWREATRLLTMMVRGNINPDDYTFNILVDALC 276

Query: 549 DDGMTEEAYKLWQKLIE 565
            +G   EA  ++  +++
Sbjct: 277 KEGRIVEAQGVFAVMMK 293



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 66/272 (24%), Positives = 125/272 (45%), Gaps = 36/272 (13%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D+ T N ++   C  G++ +A  +  +M +R + PD      L+ G    + + +A 
Sbjct: 261 INPDDYTFNILVDALCKEGRIVEAQGVFAVMMKRGEKPDIVTYNALMEGFCLSNNVSEAR 320

Query: 173 KVLQIMVMSGGVPDTITYNMMVG-----------------------------------GL 197
           ++   MV  G  PD + YN+++                                    GL
Sbjct: 321 ELFNRMVKRGLEPDVLNYNVLINGYCKIDMVDEAMVLFKEIRCKNLVPNLATYNSLIDGL 380

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           CK G++     L+DEM   G  PD++TYN  L     +  +++AI  ++ Q+ +G  P  
Sbjct: 381 CKLGRMSCVQELVDEMCDRGQSPDIVTYNIFLDAFCKSKPYEKAISLFR-QIVQGIWPDF 439

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
             Y +++E  CK   +  A E L  + I GC P++ TY  ++N  CK   +D+A+ +++ 
Sbjct: 440 YMYDVIVENFCKGEKLKIAEEALQHLLIHGCCPNVRTYTIMINALCKDCSFDEAMTLLSK 499

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           +      P+++T+ T++ +L  R   D  +K+
Sbjct: 500 MDDNDCPPDAVTFETIIGALQERNETDKAEKL 531



 Score = 97.4 bits (241), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 102/209 (48%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P +F ++ L+  + + G    AI+ F+Q+ SK   P I T   ++   C +  L+ A  L
Sbjct: 53  PPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIATLTILINCYCHQAHLSFAFSL 112

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +      P ++T+NTLI+G    G + KAM     +M  G   D+ ++ +LI G C+
Sbjct: 113 LGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDLMAKGYPLDEFSYGSLINGLCK 172

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             Q  +A+ LL+++ +   +     Y  VI GLCK + +  A+++  L+ S     D   
Sbjct: 173 NGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLIADALRLFSLVTSRGILVDVVA 232

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +++++      G   EA +L   ++   +
Sbjct: 233 YNSLIHGCCSVGQWREATRLLTMMVRGNI 261



 Score = 95.9 bits (237), Expect = 6e-17,   Method: Compositional matrix adjust.
 Identities = 52/187 (27%), Positives = 98/187 (52%)

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K+  VD  + SFN+M+ K+  P I  ++ +LGA+ + G    A+ L   L+    +P + 
Sbjct: 32  KFHTVDDTLLSFNRMLRKHPPPPIFVFDKLLGAIVRMGHYPTAISLFSQLHSKGITPSIA 91

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           T   LI+    +  +  A  L G +++ G  P+ +T  TLI GFC    V +A+    ++
Sbjct: 92  TLTILINCYCHQAHLSFAFSLLGTILKMGFQPNMVTFNTLINGFCINGMVSKAMAFRLDL 151

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
             +G  +   +Y  +I+GLCK+ +   A+Q+L+ M     +P+   +ST++  +  D + 
Sbjct: 152 MAKGYPLDEFSYGSLINGLCKNGQTRDALQLLQKMEEDLVRPNLITYSTVIDGLCKDRLI 211

Query: 554 EEAYKLW 560
            +A +L+
Sbjct: 212 ADALRLF 218


>gi|357470109|ref|XP_003605339.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355506394|gb|AES87536.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 472

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 108/397 (27%), Positives = 204/397 (51%), Gaps = 2/397 (0%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           I ++  L R+  +++A +V + M     V D  TY+ ++ GLC  G+I  A++LLDEM V
Sbjct: 4   IPIVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQV 63

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G  P+ + +N ++  +   G   +A     +   KGC P  +TY  L+  +C +  + +
Sbjct: 64  EGTFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDK 123

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ +L+ M    C P+ +T+ +LV+   K G+  D V V+ +L  +G   N  +Y++L+ 
Sbjct: 124 AMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLIS 183

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L   G  +   ++   M E    P    Y+ LI+GLC+ G  D A     +M +K   P
Sbjct: 184 GLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTP 243

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +  TY++++    + G +++A+ +   +  + C+   + Y+ LI+GL K G +++A++++
Sbjct: 244 NSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVW 303

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLC 513
            QM+  GI  D + + ++I GFC A  VE+ + L  ++     K++     Y ++++  C
Sbjct: 304 KQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFC 363

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
               V  AI +L  M+     PD       +K + D+
Sbjct: 364 TKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDN 400



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 103/377 (27%), Positives = 190/377 (50%), Gaps = 2/377 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+   C  G +  A ++   M+ RN + D +    L+ GL    RI++A  +L  M + G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ + +N+++  LCK+G +  A  L+D M + GC P+ +TYN+++  +   GK  +A+
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 +   C P  IT+  L++   K       + VL  +  +G   +  +Y+SL++  
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            K+GK +  + +   ++ +G +PN+I Y+ L+  L   G  D   + L  M    H+P  
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           FTY+ L+ G  + G + +AI  + +M   +C    V Y+ ++  LCK G L EAL +   
Sbjct: 246 FTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQ 305

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG--ISPDDITHRTLIWGFCRA 480
           +        ++ Y+++I G      +E+ M L+ QM+ +   + PD +T+  L+  FC  
Sbjct: 306 MLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTK 365

Query: 481 DQVEEAVDLLKEIGKRG 497
           + V  A+D+L  +  +G
Sbjct: 366 NSVSRAIDILNTMLDQG 382



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/332 (28%), Positives = 174/332 (52%), Gaps = 6/332 (1%)

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G   QA+  ++    + C     TY+ L+  +C +  I  A+ +LD+M +EG  P+ V +
Sbjct: 14  GNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNPVAF 73

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L++  CK+G    A  +++N+  +G  PN +TYN+L+H L  +G  D    +L+ M  
Sbjct: 74  NVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVA 133

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS---KNCQPDIVTYNTVLGALCKEGM 412
               P   T+  L++G  K+G   RA++    +VS   K  + +  +Y++++  L KEG 
Sbjct: 134 NKCVPNDITFGTLVDGFVKHG---RALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGK 190

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
               +QL   +    C P  I Y+ LIDGL ++G  ++A     +M   G +P+  T+ +
Sbjct: 191 GEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSS 250

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+WG+  A  + +A+ + KE+           Y ++I+GLCK+ K+  A+ V + M+S  
Sbjct: 251 LMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRG 310

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            K D   +S+++    +  + E+  KL+ +++
Sbjct: 311 IKLDVVAYSSMIHGFCNAQLVEQGMKLFNQML 342



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 92/324 (28%), Positives = 163/324 (50%), Gaps = 2/324 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C +G L+ ASKL+D M  +  +P+     +L+ GL    +++KA  +L  MV 
Sbjct: 74  NVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNRMVA 133

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +  VP+ IT+  +V G  K G+    + +L  +   G   +  +Y++++  +F  GK + 
Sbjct: 134 NKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGKGEH 193

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            +  WK+ + KGC P  I Y+ LI+ +C++     A E L +M  +G +P+  TY+SL+ 
Sbjct: 194 GMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSSLMW 253

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              + G    A+LV   +       + + Y+ L++ L   G       +   M       
Sbjct: 254 GYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQMLSRGIKL 313

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKN--CQPDIVTYNTVLGALCKEGMLNEALQ 418
            V  Y+ +I+G C   LV++ +  FNQM+  N   QPD+VTYN +L A C +  ++ A+ 
Sbjct: 314 DVVAYSSMIHGFCNAQLVEQGMKLFNQMLCHNPKLQPDVVTYNILLNAFCTKNSVSRAID 373

Query: 419 LLHLLNGSSCSPCLITYNTLIDGL 442
           +L+ +    C P  IT +  +  L
Sbjct: 374 ILNTMLDQGCDPDFITCDIFLKTL 397



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 83/302 (27%), Positives = 161/302 (53%)

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           ++  +C+   + +A+EV   M+   C  D  TY++L++  C +G+ D+AV +++ +   G
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             PN + +N L+ +L  +G      K++D M      P   TYN L++GLC  G +D+A+
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           +  N+MV+  C P+ +T+ T++    K G   + +++L  L          +Y++LI GL
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K+G  E  M L+ +M+E G  P+ I +  LI G CR  + +EA + L E+  +G+   +
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNS 245

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y  ++ G  ++  +  AI V + M  +     +  +S ++  +  +G  +EA  +W++
Sbjct: 246 FTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCYSILINGLCKNGKLKEALIVWKQ 305

Query: 563 LI 564
           ++
Sbjct: 306 ML 307



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/263 (30%), Positives = 135/263 (51%)

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G  D AV V   +  R    +  TY+TL+H L + G  D    +LD M      P  
Sbjct: 11  CRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEGTFPNP 70

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             +N+LI+ LCK G + RA    + M  K C P+ VTYN+++  LC +G L++A+ LL+ 
Sbjct: 71  VAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAMSLLNR 130

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  + C P  IT+ TL+DG  K G     + +   + E G   ++ ++ +LI G  +  +
Sbjct: 131 MVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGLFKEGK 190

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
            E  + L KE+ ++G K     Y  +I GLC+  K D A + L  M +  + P+   +S+
Sbjct: 191 GEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAKEYLIEMKNKGHTPNSFTYSS 250

Query: 543 IVKKVADDGMTEEAYKLWQKLIE 565
           ++    + G   +A  +W+++ +
Sbjct: 251 LMWGYFEAGDIHKAILVWKEMTD 273



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 84/294 (28%), Positives = 144/294 (48%), Gaps = 2/294 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T N ++   C +GKL  A  L++ M     +P+      L+ G ++  R     +VL
Sbjct: 104 NEVTYNSLVHGLCLKGKLDKAMSLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVL 163

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +   G   +  +Y+ ++ GL K G+    + L  EM   GC+P+ I Y+ ++  +   
Sbjct: 164 VSLEEKGYRGNEFSYSSLISGLFKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCRE 223

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A  +  +   KG  P   TY+ L+    +   I +AI V  +M    C+   V Y
Sbjct: 224 GKPDEAKEYLIEMKNKGHTPNSFTYSSLMWGYFEAGDIHKAILVWKEMTDNDCNHHEVCY 283

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM-- 353
           + L+N  CK GK  +A++V   +LSRG++ + + Y++++H   +    +   K+ + M  
Sbjct: 284 SILINGLCKNGKLKEALIVWKQMLSRGIKLDVVAYSSMIHGFCNAQLVEQGMKLFNQMLC 343

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +     P V TYNIL+N  C    V RAI+  N M+ + C PD +T +  L  L
Sbjct: 344 HNPKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTL 397



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 71/242 (29%), Positives = 116/242 (47%), Gaps = 40/242 (16%)

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS- 426
           ++  LC+ G VD+A+  F  M  +NC  D  TY+T++  LC EG ++EA+ LL  +    
Sbjct: 6   IVLALCRVGNVDQAVEVFRGMSDRNCVADGYTYSTLMHGLCNEGRIDEAVSLLDEMQVEG 65

Query: 427 ----------------------------------SCSPCLITYNTLIDGLAKKGCMEKAM 452
                                              C P  +TYN+L+ GL  KG ++KAM
Sbjct: 66  TFPNPVAFNVLISALCKKGDLSRASKLVDNMFLKGCVPNEVTYNSLVHGLCLKGKLDKAM 125

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L  +M+ N   P+DIT  TL+ GF +  +  + V +L  + ++G +    +Y  +I GL
Sbjct: 126 SLLNRMVANKCVPNDITFGTLVDGFVKHGRALDGVRVLVSLEEKGYRGNEFSYSSLISGL 185

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
            K  K +  +Q+ + M+    KP+  V+S ++  +  +G  +EA    + LIE K   KG
Sbjct: 186 FKEGKGEHGMQLWKEMVEKGCKPNTIVYSALIDGLCREGKPDEAK---EYLIEMK--NKG 240

Query: 573 TT 574
            T
Sbjct: 241 HT 242



 Score = 40.0 bits (92), Expect = 3.4,   Method: Compositional matrix adjust.
 Identities = 28/119 (23%), Positives = 52/119 (43%), Gaps = 21/119 (17%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF------------------ 152
           P ++ D  T N +L  FC++  ++ A  +++ M  +   PDF                  
Sbjct: 346 PKLQPDVVTYNILLNAFCTKNSVSRAIDILNTMLDQGCDPDFITCDIFLKTLRDNMDPPQ 405

Query: 153 ---HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
               F   L+  LI+  R   AS ++++M+    +P   T+ + V  LCK  ++R  I+
Sbjct: 406 DGREFLDELVVRLIKRQRTVGASNIIEVMLQKFLLPKPSTWALAVQQLCKPMKVRKTIS 464


>gi|449453449|ref|XP_004144470.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g13630-like [Cucumis sativus]
          Length = 830

 Score =  192 bits (488), Expect = 4e-46,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 220/450 (48%), Gaps = 5/450 (1%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASKV 174
           E T + ++   C + KL DA   I  +   N++  P       ++    ++  I+ A   
Sbjct: 237 ECTTSILIHGLCEQSKLEDA---ISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSF 293

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             +MV +G + D+ +YN+++ GLC  G +  A+   D+M   G EPDV+TYNT+ +    
Sbjct: 294 FCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLL 353

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G    A    +  L +G  P L+TYT LI   C+   I  A+++  +    G   +++ 
Sbjct: 354 LGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIF 413

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L++  CK G+ ++A+ + + + +  +EP+ I Y+ L+H L   G      ++ + M 
Sbjct: 414 YNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMR 473

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P  F    ++ GL K G +  A N F+     +   D+V YN ++    +   + 
Sbjct: 474 LKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIA 533

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA+QL + +     +P ++T+NTLI+G  ++G + +A  +   +   G+ P  +T+ TL+
Sbjct: 534 EAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             +C    ++E    L E+        +  Y ++I GLC+  K+  ++Q+LE M +    
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL 653

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           PD   ++TI++         +A +L+  ++
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMML 683



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 233/519 (44%), Gaps = 39/519 (7%)

Query: 85  LAVNKKLRGLTITKKSHDPSLPSSDG---PFVENDEKTNNKILQNFCSRGKLTDASKLID 141
            + N  L GL +   S D +L  +D      VE D  T N + + F   G ++ A K++ 
Sbjct: 307 FSYNILLHGLCVAG-SMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQ 365

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            M  +   PD      LI G  ++  IE+A K+ Q  +  G   + I YNM++  LCK G
Sbjct: 366 KMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVG 425

Query: 202 QIRSAIALLDEMSVSGCEPDVITYN----------------------------------- 226
           +I  A+ L DEM     EPD I Y+                                   
Sbjct: 426 RIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQR 485

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            +L  +F NG   +A  ++    R      ++ Y I+I+   +  GIA A+++   M   
Sbjct: 486 AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIER 545

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G +P +VT+N+L+N  C++G   +A  ++  +  +G+ P+ +TY TL+++    G    +
Sbjct: 546 GITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEM 605

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
              L  M   +  PT  TY +LI GLC+   +  ++     M +K   PD VTYNT++  
Sbjct: 606 FHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQC 665

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK   + +ALQL +++   +C P  +TY  LI+ L   G ++    +   + +  I+  
Sbjct: 666 FCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLK 725

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+ T+I   C   QV +A+    ++  +G  +    Y  VI+ LCK   +  A     
Sbjct: 726 KVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFV 785

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +M+S    PD  +  T++      G     ++    +++
Sbjct: 786 MMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVK 824



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 215/477 (45%), Gaps = 35/477 (7%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           +D  + N +L   C  G + +A    D M +    PD      L +G + +  +  A KV
Sbjct: 304 HDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKV 363

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           +Q M++ G  PD +TY  ++ G C+ G I  A+ L  E    G + +VI YN +L  +  
Sbjct: 364 VQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCK 423

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP---- 290
            G+ ++A+  + +       P  I Y+ILI  +CK+  + RA ++ + M ++   P    
Sbjct: 424 VGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFA 483

Query: 291 -------------------------------DIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
                                          D+V YN +++   +     +A+ +   ++
Sbjct: 484 QRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMI 543

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            RG+ P+ +T+NTL++    RG      K+L+++      P+V TY  L+N  C+ G + 
Sbjct: 544 ERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQ 603

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
              +  ++M +    P  VTY  ++  LC++  ++E+LQLL  +      P  +TYNT+I
Sbjct: 604 EMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTII 663

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
               K   + KA+ LY  M+ +   P  +T++ LI   C    +++   ++  I  R   
Sbjct: 664 QCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNIT 723

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           ++   Y  +I   C   +V  A+     M++  +      +S ++ ++   G+  EA
Sbjct: 724 LKKVTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEA 780



 Score =  176 bits (445), Expect = 4e-41,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 197/425 (46%), Gaps = 2/425 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N I+  FC  G +  A     +M +   + D F + I L+ GL     +++A      M 
Sbjct: 275 NTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSFSYNI-LLHGLCVAGSMDEALGFTDDME 333

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  PD +TYN +  G    G +  A  ++ +M + G  PD++TY T++      G  +
Sbjct: 334 KHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIE 393

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A+   ++ L +G    +I Y +L+  +CK   I  A+ + D+M      PD + Y+ L+
Sbjct: 394 EALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILI 453

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK+G    A  +   +  +   P+      +L  L   G         D        
Sbjct: 454 HGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLM 513

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             V  YNI+I+G  +   +  A+  + +M+ +   P +VT+NT++   C+ G L EA ++
Sbjct: 514 EDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKM 573

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L ++      P ++TY TL++   + G M++      +M  N + P  +T+  LI G CR
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
            +++ E++ LL+ +  +G    +  Y  +I   CK K++  A+Q+  +M+     P    
Sbjct: 634 QNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVT 693

Query: 540 FSTIV 544
           +  ++
Sbjct: 694 YKVLI 698



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 96/389 (24%), Positives = 177/389 (45%), Gaps = 8/389 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           +E D    + ++   C  G +  A +L + M  + + P  HF    ++ GL +   I +A
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH-HFAQRAVLLGLFKNGNISEA 500

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
                       + D + YN+M+ G  +   I  A+ L  +M   G  P V+T+NT++  
Sbjct: 501 RNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLING 560

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G   +A    +    KG  P ++TYT L+   C+   +      L +M      P 
Sbjct: 561 FCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPT 620

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            VTY  L+   C+Q K  +++ ++  + ++G+ P+S+TYNT++             ++ +
Sbjct: 621 HVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYN 680

Query: 352 IMNEASHSPTVFTYNILINGLCKYGL---VDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +M   +  PT  TY +LIN LC +G    VDR + S      +N     VTY T++ A C
Sbjct: 681 MMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIED---RNITLKKVTYMTIIKAHC 737

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
            +G +++AL   + +        +  Y+ +I+ L K+G + +A   +  M+  G++PD  
Sbjct: 738 AKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPE 797

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRG 497
             +T++  F +        + L  + K G
Sbjct: 798 ICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 31/285 (10%)

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC-WDAVDKI------------------- 349
           DA+ VI  +     + +  TYN+LLH++      WD  ++I                   
Sbjct: 188 DALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGL 247

Query: 350 ---------LDIMNEASH--SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
                    +  +++++    P++ + N +++  CK GL+D A + F  MV      D  
Sbjct: 248 CEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSFFCLMVKNGLLHDSF 307

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           +YN +L  LC  G ++EAL     +      P ++TYNTL  G    G M  A  +  +M
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           +  G++PD +T+ TLI G C+   +EEA+ L +E   RG K+    Y +++  LCK  ++
Sbjct: 368 LLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRI 427

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + A+ + + M + R +PD  V+S ++  +  +G  + AY+L++++
Sbjct: 428 EEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472



 Score =  114 bits (285), Expect = 1e-22,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 4/289 (1%)

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +V +++ + G      T + L++  C+Q K +DA+  +++  ++ + P+ ++ NT++   
Sbjct: 223 DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKF 281

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D       +M +       F+YNIL++GLC  G +D A+   + M     +PD+
Sbjct: 282 CKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDV 341

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTYNT+       G+++ A +++  +     +P L+TY TLI G  + G +E+A+ L  +
Sbjct: 342 VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQE 401

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
            +  G   + I +  L+   C+  ++EEA+ L  E+     +     Y ++IHGLCK   
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA---YKLWQKL 563
           V  A Q+ E M   R  P       ++  +  +G   EA   +  W ++
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRM 510



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 41/208 (19%), Positives = 86/208 (41%), Gaps = 37/208 (17%)

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +N   + + ++ +  A  +  M+++AL ++  +   +    + TYN+L+  +     M  
Sbjct: 164 RNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWD 223

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL----KEIG------------ 494
              +Y ++  +G    + T   LI G C   ++E+A+  L    K +G            
Sbjct: 224 ---VYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSK 280

Query: 495 ------------------KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
                             K G    + +Y +++HGLC +  +D A+   + M     +PD
Sbjct: 281 FCKVGLIDVARSFFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPD 340

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              ++T+ K     G+   A K+ QK++
Sbjct: 341 VVTYNTLAKGFLLLGLMSGARKVVQKML 368


>gi|449527621|ref|XP_004170808.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At1g13630-like [Cucumis
           sativus]
          Length = 830

 Score =  192 bits (488), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 220/450 (48%), Gaps = 5/450 (1%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASKV 174
           E T + ++   C + KL DA   I  +   N++  P       ++    ++  I+ A   
Sbjct: 237 ECTTSILIHGLCEQSKLEDA---ISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSX 293

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
             +MV +G + D+ +YN+++ GLC  G +  A+   D+M   G EPDV+TYNT+ +    
Sbjct: 294 FCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLL 353

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G    A    +  L +G  P L+TYT LI   C+   I  A+++  +    G   +++ 
Sbjct: 354 LGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIF 413

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L++  CK G+ ++A+ + + + +  +EP+ I Y+ L+H L   G      ++ + M 
Sbjct: 414 YNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMR 473

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
                P  F    ++ GL K G +  A N F+     +   D+V YN ++    +   + 
Sbjct: 474 LKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIA 533

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA+QL + +     +P ++T+NTLI+G  ++G + +A  +   +   G+ P  +T+ TL+
Sbjct: 534 EAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLM 593

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             +C    ++E    L E+        +  Y ++I GLC+  K+  ++Q+LE M +    
Sbjct: 594 NAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLL 653

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           PD   ++TI++         +A +L+  ++
Sbjct: 654 PDSVTYNTIIQCFCKGKEITKALQLYNMML 683



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 135/519 (26%), Positives = 232/519 (44%), Gaps = 39/519 (7%)

Query: 85  LAVNKKLRGLTITKKSHDPSLPSSDG---PFVENDEKTNNKILQNFCSRGKLTDASKLID 141
            + N  L GL +   S D +L  +D      VE D  T N + + F   G ++ A K++ 
Sbjct: 307 FSYNILLHGLCVAG-SMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQ 365

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
            M  +   PD      LI G  ++  IE+A K+ Q  +  G   + I YNM++  LCK G
Sbjct: 366 KMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVG 425

Query: 202 QIRSAIALLDEMSVSGCEPDVITYN----------------------------------- 226
           +I  A+ L DEM     EPD I Y+                                   
Sbjct: 426 RIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQR 485

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
            +L  +F NG   +A  ++    R      ++ Y I+I+   +  GIA A+++   M   
Sbjct: 486 AVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIER 545

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G +P +VT+N+L+N  C++G   +A  ++  +  +G+ P+ +TY TL+++    G    +
Sbjct: 546 GITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEM 605

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
              L  M   +  PT  TY +LI GLC+   +  ++     M +K   PD VTYNT++  
Sbjct: 606 FHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQC 665

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            CK   + +ALQL +++   +C P  +TY  LI+ L   G ++    +   + +  I+  
Sbjct: 666 FCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNITLK 725

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             T+ T+I   C   QV +A+    ++  +G  +    Y  VI+ LCK   +  A     
Sbjct: 726 KXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFV 785

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +M+S    PD  +  T++      G     ++    +++
Sbjct: 786 MMLSEGVTPDPEICKTVLNAFHQQGNNSSVFEFLAMVVK 824



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 114/477 (23%), Positives = 215/477 (45%), Gaps = 35/477 (7%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           +D  + N +L   C  G + +A    D M +    PD      L +G + +  +  A KV
Sbjct: 304 HDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKV 363

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           +Q M++ G  PD +TY  ++ G C+ G I  A+ L  E    G + +VI YN +L  +  
Sbjct: 364 VQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCK 423

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP---- 290
            G+ ++A+  + +       P  I Y+ILI  +CK+  + RA ++ + M ++   P    
Sbjct: 424 VGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPHHFA 483

Query: 291 -------------------------------DIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
                                          D+V YN +++   +     +A+ +   ++
Sbjct: 484 QRAVLLGLFKNGNISEARNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMI 543

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
            RG+ P+ +T+NTL++    RG      K+L+++      P+V TY  L+N  C+ G + 
Sbjct: 544 ERGITPSVVTFNTLINGFCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQ 603

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
              +  ++M +    P  VTY  ++  LC++  ++E+LQLL  +      P  +TYNT+I
Sbjct: 604 EMFHFLHEMEANAVVPTHVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTII 663

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
               K   + KA+ LY  M+ +   P  +T++ LI   C    +++   ++  I  R   
Sbjct: 664 QCFCKGKEITKALQLYNMMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIEDRNIT 723

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           ++   Y  +I   C   +V  A+     M++  +      +S ++ ++   G+  EA
Sbjct: 724 LKKXTYMTIIKAHCAKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEA 780



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 105/425 (24%), Positives = 197/425 (46%), Gaps = 2/425 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N I+  FC  G +  A     +M +   + D F + I L+ GL     +++A      M 
Sbjct: 275 NTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSFSYNI-LLHGLCVAGSMDEALGFTDDME 333

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  PD +TYN +  G    G +  A  ++ +M + G  PD++TY T++      G  +
Sbjct: 334 KHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIE 393

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A+   ++ L +G    +I Y +L+  +CK   I  A+ + D+M      PD + Y+ L+
Sbjct: 394 EALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILI 453

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK+G    A  +   +  +   P+      +L  L   G         D        
Sbjct: 454 HGLCKEGFVQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRMDLM 513

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             V  YNI+I+G  +   +  A+  + +M+ +   P +VT+NT++   C+ G L EA ++
Sbjct: 514 EDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLINGFCRRGDLMEARKM 573

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L ++      P ++TY TL++   + G M++      +M  N + P  +T+  LI G CR
Sbjct: 574 LEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPTHVTYTVLIKGLCR 633

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
            +++ E++ LL+ +  +G    +  Y  +I   CK K++  A+Q+  +M+     P    
Sbjct: 634 QNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYNMMLLHNCDPTQVT 693

Query: 540 FSTIV 544
           +  ++
Sbjct: 694 YKVLI 698



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 95/389 (24%), Positives = 176/389 (45%), Gaps = 8/389 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           +E D    + ++   C  G +  A +L + M  + + P  HF    ++ GL +   I +A
Sbjct: 442 LEPDFIVYSILIHGLCKEGFVQRAYQLYEQMRLKRKFPH-HFAQRAVLLGLFKNGNISEA 500

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
                       + D + YN+M+ G  +   I  A+ L  +M   G  P V+T+NT++  
Sbjct: 501 RNYFDTWTRMDLMEDVVLYNIMIDGYVRLDGIAEAMQLYYKMIERGITPSVVTFNTLING 560

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
               G   +A    +    KG  P ++TYT L+   C+   +      L +M      P 
Sbjct: 561 FCRRGDLMEARKMLEVIRLKGLVPSVVTYTTLMNAYCEVGNMQEMFHFLHEMEANAVVPT 620

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            VTY  L+   C+Q K  +++ ++  + ++G+ P+S+TYNT++             ++ +
Sbjct: 621 HVTYTVLIKGLCRQNKMHESLQLLEYMYAKGLLPDSVTYNTIIQCFCKGKEITKALQLYN 680

Query: 352 IMNEASHSPTVFTYNILINGLCKYGL---VDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +M   +  PT  TY +LIN LC +G    VDR + S      +N      TY T++ A C
Sbjct: 681 MMLLHNCDPTQVTYKVLINALCIFGDLKDVDRMVVSIED---RNITLKKXTYMTIIKAHC 737

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
            +G +++AL   + +        +  Y+ +I+ L K+G + +A   +  M+  G++PD  
Sbjct: 738 AKGQVSKALGYFNQMLAKGFVISIRDYSAVINRLCKRGLITEAKYFFVMMLSEGVTPDPE 797

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRG 497
             +T++  F +        + L  + K G
Sbjct: 798 ICKTVLNAFHQQGNNSSVFEFLAMVVKSG 826



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 77/285 (27%), Positives = 141/285 (49%), Gaps = 31/285 (10%)

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC-WDAVDKI------------------- 349
           DA+ VI  +     + +  TYN+LLH++      WD  ++I                   
Sbjct: 188 DALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWDVYNEIKVSGAPQSECTTSILIHGL 247

Query: 350 ---------LDIMNEASH--SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
                    +  +++++    P++ + N +++  CK GL+D A + F  MV      D  
Sbjct: 248 CEQSKLEDAISFLHDSNKVVGPSIVSINTIMSKFCKVGLIDVARSXFCLMVKNGLLHDSF 307

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQM 458
           +YN +L  LC  G ++EAL     +      P ++TYNTL  G    G M  A  +  +M
Sbjct: 308 SYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDVVTYNTLAKGFLLLGLMSGARKVVQKM 367

Query: 459 MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKV 518
           +  G++PD +T+ TLI G C+   +EEA+ L +E   RG K+    Y +++  LCK  ++
Sbjct: 368 LLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQETLSRGFKLNVIFYNMLLSCLCKVGRI 427

Query: 519 DMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           + A+ + + M + R +PD  V+S ++  +  +G  + AY+L++++
Sbjct: 428 EEALTLFDEMETLRLEPDFIVYSILIHGLCKEGFVQRAYQLYEQM 472



 Score =  114 bits (284), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 75/289 (25%), Positives = 142/289 (49%), Gaps = 4/289 (1%)

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           +V +++ + G      T + L++  C+Q K +DA+  +++  ++ + P+ ++ NT++   
Sbjct: 223 DVYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHD-SNKVVGPSIVSINTIMSKF 281

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D       +M +       F+YNIL++GLC  G +D A+   + M     +PD+
Sbjct: 282 CKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPDV 341

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTYNT+       G+++ A +++  +     +P L+TY TLI G  + G +E+A+ L  +
Sbjct: 342 VTYNTLAKGFLLLGLMSGARKVVQKMLLQGLNPDLVTYTTLICGHCQMGNIEEALKLRQE 401

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
            +  G   + I +  L+   C+  ++EEA+ L  E+     +     Y ++IHGLCK   
Sbjct: 402 TLSRGFKLNVIFYNMLLSCLCKVGRIEEALTLFDEMETLRLEPDFIVYSILIHGLCKEGF 461

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA---YKLWQKL 563
           V  A Q+ E M   R  P       ++  +  +G   EA   +  W ++
Sbjct: 462 VQRAYQLYEQMRLKRKFPHHFAQRAVLLGLFKNGNISEARNYFDTWTRM 510



 Score = 43.5 bits (101), Expect = 0.33,   Method: Compositional matrix adjust.
 Identities = 41/208 (19%), Positives = 86/208 (41%), Gaps = 37/208 (17%)

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           +N   + + ++ +  A  +  M+++AL ++  +   +    + TYN+L+  +     M  
Sbjct: 164 RNWDSNGLVWDMLAFAYSRHEMIHDALFVIAKMKDLNFQASVPTYNSLLHNMRHTDIMWD 223

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL----KEIG------------ 494
              +Y ++  +G    + T   LI G C   ++E+A+  L    K +G            
Sbjct: 224 ---VYNEIKVSGAPQSECTTSILIHGLCEQSKLEDAISFLHDSNKVVGPSIVSINTIMSK 280

Query: 495 ------------------KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
                             K G    + +Y +++HGLC +  +D A+   + M     +PD
Sbjct: 281 FCKVGLIDVARSXFCLMVKNGLLHDSFSYNILLHGLCVAGSMDEALGFTDDMEKHGVEPD 340

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLI 564
              ++T+ K     G+   A K+ QK++
Sbjct: 341 VVTYNTLAKGFLLLGLMSGARKVVQKML 368


>gi|297723047|ref|NP_001173887.1| Os04g0351333 [Oryza sativa Japonica Group]
 gi|255675359|dbj|BAH92615.1| Os04g0351333 [Oryza sativa Japonica Group]
          Length = 740

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 114/451 (25%), Positives = 229/451 (50%), Gaps = 3/451 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I++  C   ++  A  ++  M      PD      +I GL +   ++KA +VL+ MV 
Sbjct: 87  NSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 146

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P++ITYN ++ G    G    ++ +  +MS  G  P V   N+ +  +F +G+  +
Sbjct: 147 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 206

Query: 241 AIGFWKDQLRKGCPPYLITYTILIE--QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           A   +   + KG  P +I+Y+ ++          +A    + + M  +G +P+   +N L
Sbjct: 207 AKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNIFNLMLTKGIAPNKHVFNIL 266

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   + G  D A+L+  ++ ++GM P+++T+ T++ SL   G  D      + M +   
Sbjct: 267 INAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGV 326

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY-NTVLGALCKEGMLNEAL 417
            P+   Y  LI G C +G + +A    ++M++K+  P  V Y ++++  LCKEG + E  
Sbjct: 327 PPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGK 386

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            ++ ++  +   P ++T+N+L++G    G ME+A  L   M   GI P+   + TL+ G+
Sbjct: 387 DIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGY 446

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  ++++A+ + +++  +G K  +  Y +++HGL ++++   A ++   MI S      
Sbjct: 447 CKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVSI 506

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +  ++  +  +  T+EA  L +KL    V
Sbjct: 507 HTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 537



 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 117/456 (25%), Positives = 224/456 (49%), Gaps = 8/456 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   G++  A  L   M  +  +P    C ++I+ L ++  ++KA  ++Q MV SG
Sbjct: 54  LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 113

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY++++ GLCK   +  A  +L++M  +G  P+ ITYN+++     +G + +++
Sbjct: 114 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 173

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN-- 300
             +K     G  P +      I  + K      A  + D M ++G  PDI++Y+++++  
Sbjct: 174 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGY 233

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
            +       D   + N +L++G+ PN   +N L+++    G  D    I + M      P
Sbjct: 234 ATATDSCLADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIP 293

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+  +I+ LC+ G +D A++ FN MV     P    Y  ++   C  G L +A +L+
Sbjct: 294 DTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELI 353

Query: 421 -HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
             ++N     P +  ++++I+ L K+G + +   +   M++ G  P+ +T  +L+ G+C 
Sbjct: 354 SEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCL 413

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              +EEA  LL  +   G +     Y  ++ G CK+ ++D A+ V   M+    KP   +
Sbjct: 414 VGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVL 473

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +S I+  +     T  A K++ ++I     E GTT+
Sbjct: 474 YSIILHGLFQARRTTAAKKMFHEMI-----ESGTTV 504



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/387 (26%), Positives = 193/387 (49%), Gaps = 9/387 (2%)

Query: 185 PDTI-TYNMMVGGLCKRGQIRS--AIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           P TI TYN+++   C R   R    +A++  +  +G  PD  +Y+ I   + D G+  +A
Sbjct: 11  PPTIHTYNILID--CYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD-GEVDKA 67

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              + + + +G  P ++    +I+++CK   + +A  ++  M   G +PD+ TY+ +++ 
Sbjct: 68  HCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDG 127

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK    D A  V+  ++  G  PNSITYN+L+H     G W+   ++   M+     PT
Sbjct: 128 LCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPT 187

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG--ALCKEGMLNEALQL 419
           V   N  I+ L K+G  + A   F+ MV K  +PDI++Y+T+L   A   +  L +   +
Sbjct: 188 VDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTMLHGYATATDSCLADVHNI 247

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            +L+     +P    +N LI+  A+ G M+KAM+++  M   G+ PD +T  T+I   CR
Sbjct: 248 FNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCR 307

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT- 538
             ++++A+     +   G     + Y  +I G C   ++  A +++  M++    P    
Sbjct: 308 IGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVK 367

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            FS+I+  +  +G   E   +   +++
Sbjct: 368 YFSSIINNLCKEGRVAEGKDIMDMMVQ 394



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 106/428 (24%), Positives = 196/428 (45%), Gaps = 1/428 (0%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L D   + ++M  +   P+ H    LI    R   ++KA  + + M   G +PDT+T+  
Sbjct: 241 LADVHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFAT 300

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++  LC+ G++  A+   + M   G  P    Y  +++   ++G+  +A     + + K 
Sbjct: 301 VISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKD 360

Query: 253 CPPYLITY-TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
            PP  + Y + +I  +CK+  +A   +++D M   G  P++VT+NSL+   C  G  ++A
Sbjct: 361 IPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEA 420

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
             +++ + S G+EPN   Y TL+      G  D    +   M      PT   Y+I+++G
Sbjct: 421 FALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHG 480

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           L +      A   F++M+       I TY  VLG LC+    +EA  LL  L   +    
Sbjct: 481 LFQARRTTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFD 540

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           +IT+N +I  + K G  ++A  L+  +   G+ P+  T+  +I    + +  EEA +L  
Sbjct: 541 IITFNIVISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFI 600

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            + K G+   +     ++  L    +V  A   L ++  +    + +  S +    + +G
Sbjct: 601 SVEKSGHASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREG 660

Query: 552 MTEEAYKL 559
              E  KL
Sbjct: 661 KYREHIKL 668



 Score =  154 bits (388), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 190/405 (46%), Gaps = 2/405 (0%)

Query: 123 ILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           IL N  +R  + D + LI + M  +  IPD      +I  L RI R++ A      MV  
Sbjct: 265 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 324

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY-NTILRTMFDNGKFKQ 240
           G  P    Y  ++ G C  G++  A  L+ EM      P  + Y ++I+  +   G+  +
Sbjct: 325 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 384

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                   ++ G  P ++T+  L+E  C    +  A  +LD MA  G  P+   Y +LV+
Sbjct: 385 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 444

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+ DDA+ V  ++L +G++P S+ Y+ +LH L       A  K+   M E+  + 
Sbjct: 445 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 504

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           ++ TY +++ GLC+    D A     ++ + N + DI+T+N V+ A+ K G   EA +L 
Sbjct: 505 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 564

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++     P + TY+ +I  L K+   E+A  L+  + ++G + D      ++      
Sbjct: 565 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 624

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
            +V +A + L  IG+    +  S   L+     +  K    I++L
Sbjct: 625 AEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 669


>gi|224068454|ref|XP_002326124.1| predicted protein [Populus trichocarpa]
 gi|222833317|gb|EEE71794.1| predicted protein [Populus trichocarpa]
          Length = 512

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 113/424 (26%), Positives = 202/424 (47%), Gaps = 6/424 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+R L ++   +  + V   M   G +PD+     +V  + +         LL E+    
Sbjct: 79  LMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEVQGKE 138

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              +   YN +L  +    +  +AI  +K+ L    PP   T+ ILI  +C+  G+ RA 
Sbjct: 139 VRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGVDRAF 198

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHS 336
           EV  DM   GC PD+VTYN+L+N  CK  +      +   + SR    P+ +TY +++  
Sbjct: 199 EVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTSIISG 258

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
               G       + + M  +   P V T+N+LI+G  K G +  A   + +M   +C  D
Sbjct: 259 FCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFDCSAD 318

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +VT+ +++   C+ G +N  L+  +++   + SP + TY  LI+ L K+  + +A    G
Sbjct: 319 VVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEARDFLG 378

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           Q+  + I P    +  +I GFC+A  V+E   +LKE+ ++        + ++I G C   
Sbjct: 379 QIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTFTILIIGHCVKG 438

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE-----WKVFEK 571
           ++  AI +   M+++R  PD+   ++++  +   GM  EAY++ +  +E        FEK
Sbjct: 439 RMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRIRKMALEDRNLGLSSFEK 498

Query: 572 GTTL 575
              L
Sbjct: 499 AIPL 502



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 82/299 (27%), Positives = 139/299 (46%), Gaps = 36/299 (12%)

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL--- 350
           TYN L+   C+ G +D   +V + + S G  P+S     L+  +     +D V K+L   
Sbjct: 75  TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134

Query: 351 ----------------------DIMNEASH----------SPTVFTYNILINGLCKYGLV 378
                                 + ++EA +           P  +T+NILI GLC+ G V
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNT 437
           DRA   F  M S  C PD+VTYNT++  LCK   +    +L   + + S CSP ++TY +
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +I G  K G M++A  L+ +MM +GI P+ IT   LI GF +   + EA  + +++    
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKMAYFD 314

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                  +  +I G C++ +V+  ++   +M +    P    ++ ++  +  +    EA
Sbjct: 315 CSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKENRLNEA 373



 Score =  107 bits (266), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/236 (28%), Positives = 111/236 (47%), Gaps = 1/236 (0%)

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TYN L+ SL   G  D V+ + D M    H P       L+  + +    D       ++
Sbjct: 75  TYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLLAEV 134

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
             K  + +   YN +L  L K+  ++EA+ L          P   T+N LI GL + G +
Sbjct: 135 QGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRVGGV 194

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRL 507
           ++A  ++  M   G  PD +T+ TLI G C+A++V+   +L KEI  R +   +   Y  
Sbjct: 195 DRAFEVFKDMESFGCLPDVVTYNTLINGLCKANEVQRGCELFKEIQSRSDCSPDIVTYTS 254

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +I G CKS K+  A  + E M+ S  +P+   F+ ++      G   EA  +++K+
Sbjct: 255 IISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMYRKM 310



 Score = 94.4 bits (233), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 59/234 (25%), Positives = 102/234 (43%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+  FC  GK+ +AS L + M R    P+      LI G  +I  I +A  + 
Sbjct: 248 DIVTYTSIISGFCKSGKMKEASNLFEEMMRSGIQPNVITFNVLIDGFGKIGNIAEAEAMY 307

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M       D +T+  ++ G C+ GQ+   +   + M      P V TY  ++  +   
Sbjct: 308 RKMAYFDCSADVVTFTSLIDGYCRAGQVNHGLKFWNVMKTRNVSPTVYTYAVLINALCKE 367

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A  F          P    Y  +I+  CK   +     +L +M  + C PD VT+
Sbjct: 368 NRLNEARDFLGQIKNSSIIPKPFMYNPVIDGFCKAGNVDEGNVILKEMEEKRCDPDKVTF 427

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
             L+   C +G+  +A+ + N +L+    P++IT N+L+  L   G  +   +I
Sbjct: 428 TILIIGHCVKGRMFEAINIFNRMLATRCAPDNITVNSLISCLLKAGMPNEAYRI 481



 Score = 43.1 bits (100), Expect = 0.37,   Method: Compositional matrix adjust.
 Identities = 27/133 (20%), Positives = 61/133 (45%)

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
           C  TYN L+  L + G  +   +++  M  +G  PD      L+    +A   +    LL
Sbjct: 72  CYSTYNLLMRSLCQMGHHDLVNIVFDYMGSDGHLPDSKLLGFLVTWMAQASDFDMVKKLL 131

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            E+  +  ++ +  Y  ++  L K  +V  AI + +  +  +  PD   F+ +++ +   
Sbjct: 132 AEVQGKEVRINSFVYNNLLSVLVKQNQVHEAIYLFKEYLVMQSPPDTWTFNILIRGLCRV 191

Query: 551 GMTEEAYKLWQKL 563
           G  + A+++++ +
Sbjct: 192 GGVDRAFEVFKDM 204


>gi|414872431|tpg|DAA50988.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 1627

 Score =  192 bits (487), Expect = 5e-46,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 209/409 (51%), Gaps = 2/409 (0%)

Query: 157  NLIRGLIRIDRIEKASKVLQIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
            ++I  L+   + EK  ++   M   G   PDT+TY+ ++   CK G+  SAI LL+EM  
Sbjct: 1189 SMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKE 1248

Query: 216  SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
             G +P    Y  ++   F       A+  +++   + C P + TYT LI  + K   I  
Sbjct: 1249 IGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDE 1308

Query: 276  AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
            A     +M  EGC PD V  N+++NF  K G+ DDA+ +   + +    P+ +TYNT++ 
Sbjct: 1309 AYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIK 1368

Query: 336  SL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            +L  S+     V    + M E+  SP+ FTY+ILI+G CK   +++A+    +M  K   
Sbjct: 1369 ALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP 1428

Query: 395  PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            P    Y +++ AL K    + A +L   L  +  S     Y  +I  L K G ++ A+ +
Sbjct: 1429 PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINM 1488

Query: 455  YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            + +M + G +PD   +  L+ G  R   ++EA+  ++ + + G     ++Y ++++GL K
Sbjct: 1489 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAK 1548

Query: 515  SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            +     A+++L  M  S  +PD   ++T++  ++  GM EEA KL +++
Sbjct: 1549 TGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEM 1597



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 182/355 (51%), Gaps = 4/355 (1%)

Query: 132  KLTDASKLIDIMAR-RNQI--PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
            K  DA   + +    R+Q   PD      LIRGL +  RI++A      M   G  PDT+
Sbjct: 1267 KFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTV 1326

Query: 189  TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
              N M+  L K G++  A+ L  EM    C P V+TYNTI++ +F++      +  W ++
Sbjct: 1327 FMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFER 1386

Query: 249  LRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            +++ G  P   TY+ILI+  CK   + +A+ +L++M  +G  P    Y SL++   K  +
Sbjct: 1387 MKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 1446

Query: 308  YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            YD A  +   L       ++  Y  ++  LG  G  D    + D MN+   +P V+ YN 
Sbjct: 1447 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 1506

Query: 368  LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
            L++GL + G++D A+++  +M    C PDI +YN +L  L K G  + A+++L  +  S+
Sbjct: 1507 LMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST 1566

Query: 428  CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
              P +++YNT++  L+  G  E+A  L  +M   G   D IT+ +++    + D 
Sbjct: 1567 VRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 1621



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 191/402 (47%), Gaps = 5/402 (1%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T + ++  FC  G+   A +L++ M      P       LI    + +    A  + 
Sbjct: 1219 DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLF 1278

Query: 176  QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
            + M      PD  TY  ++ GL K G+I  A     EM   GC PD +  N ++  +   
Sbjct: 1279 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKA 1338

Query: 236  GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPDI 292
            G+   A+  +++     C P ++TY  +I+ + +    +RA EV    + M   G SP  
Sbjct: 1339 GRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFES--KSRASEVPSWFERMKESGISPSS 1396

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             TY+ L++  CK  + + A++++  +  +G  P    Y +L+ +LG    +D   ++   
Sbjct: 1397 FTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE 1456

Query: 353  MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
            + E   S +   Y ++I  L K G +D AIN F++M    C PD+  YN ++  L + GM
Sbjct: 1457 LKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGM 1516

Query: 413  LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
            L+EAL  +  +    C P + +YN +++GLAK G   +AM +   M ++ + PD +++ T
Sbjct: 1517 LDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNT 1576

Query: 473  LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            ++     A   EEA  L+KE+   G +     Y  ++  + K
Sbjct: 1577 VLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 1618



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 179/376 (47%), Gaps = 46/376 (12%)

Query: 232  MFDNGKF-KQAIG-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-C 288
            M  N K  +QAI  F++ + RK C P    Y  +I  +  +    +  ++ ++M+ EG C
Sbjct: 1158 MLGNAKMVRQAITIFYQIKTRK-CQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHC 1216

Query: 289  SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             PD VTY++L++  CK G+ D A+ ++N +   GM+P +  Y T+L +L  +  ++    
Sbjct: 1217 FPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIY-TMLIALFFK--FNDAHG 1273

Query: 349  ILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
             L +  E  H    P VFTY  LI GL K G +D A + F +M  + C+PD V  N ++ 
Sbjct: 1274 ALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMIN 1333

Query: 406  ALCKEGMLNEALQLLHLLNGSSCSPCLITYNT---------------------------- 437
             L K G L++A++L   +    C P ++TYNT                            
Sbjct: 1334 FLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 1393

Query: 438  --------LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
                    LIDG  K   MEKAM+L  +M E G  P    + +LI    +A + + A +L
Sbjct: 1394 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 1453

Query: 490  LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             +E+ +         Y ++I  L K+ ++D AI + + M      PD   ++ ++  +A 
Sbjct: 1454 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 1513

Query: 550  DGMTEEAYKLWQKLIE 565
             GM +EA    +++ E
Sbjct: 1514 TGMLDEALSTMRRMQE 1529


>gi|224086982|ref|XP_002308024.1| predicted protein [Populus trichocarpa]
 gi|222854000|gb|EEE91547.1| predicted protein [Populus trichocarpa]
          Length = 789

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 124/435 (28%), Positives = 214/435 (49%), Gaps = 16/435 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N +L  FC   ++ +A  L+ +  +   + D      LIRGL R  R E   
Sbjct: 262 VGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQ 321

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + + M+     PD   Y +M+ GL + G++R A+ LL+EM+ SG  PD + YN +++  
Sbjct: 322 LLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGF 381

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            D G   +A     +  R  C P + TY+ILI  +C+      A E+ ++M   GC P  
Sbjct: 382 CDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSA 441

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNL-----------LSRGMEP--NSITYNTLLHSLGS 339
           VT+NSL++  CK G+ + A L+   +           LS+G     +S +   ++  L  
Sbjct: 442 VTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCD 501

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G      +IL  + ++  +P ++TYNIL+NG CK G  + A   F +M  K   PD VT
Sbjct: 502 SGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVT 561

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           Y T++  L +     +A ++   +  + C+P    Y T++  + ++  + +A  L+ + +
Sbjct: 562 YGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYL 621

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
            N  S +D   +  I G+    +VE+AV  L E+  + N      Y + + GLC++++V 
Sbjct: 622 RNIRSQEDEAIKA-IEGYFEKQEVEKAVRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVG 680

Query: 520 MAIQVLELMISSRYK 534
            A+++   +I   YK
Sbjct: 681 EALKI--FLILEEYK 693



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/436 (26%), Positives = 213/436 (48%), Gaps = 16/436 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQI 177
           T + ++   C  G + DA  L D M +R  +PD F +C+ +I GL R  R++ A ++   
Sbjct: 198 TFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCV-VISGLCRSKRVDDAYRLFDK 256

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  SG  PD +T N ++ G C   ++  A +LL      G   DV  Y+ ++R +F   +
Sbjct: 257 MKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKR 316

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           ++     ++  +     P +  YTI+++ + +   +  A+E+L++M   G  PD V YN 
Sbjct: 317 YEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNV 376

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   C  G   +A  +   +      PN  TY+ L+  +   G      +I + M +  
Sbjct: 377 LIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLG 436

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQM-VSKNCQ------------PDIVTYNTVL 404
             P+  T+N LI+GLCK G +++A   F +M + +N               D  +   ++
Sbjct: 437 CYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMV 496

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LC  G++++A ++L  L  S  +P + TYN L++G  K G    A  L+ +M   G+S
Sbjct: 497 EQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLS 556

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD +T+ TLI G  R  + E+A  +  ++ K G     + YR ++  +C+  ++  A  +
Sbjct: 557 PDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSL 616

Query: 525 -LELMISSRYKPDDTV 539
            L+ + + R + D+ +
Sbjct: 617 WLKYLRNIRSQEDEAI 632



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 116/467 (24%), Positives = 211/467 (45%), Gaps = 16/467 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C   ++ DA +L D M      PDF  C  L+ G   +DR+++A  +L
Sbjct: 230 DAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLL 289

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++    G V D   Y+ ++ GL +  +      L  +M     +PDV  Y  +++ + + 
Sbjct: 290 RLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEA 349

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK + A+    +    G  P  + Y +LI+  C    ++ A  +  +++   C P++ TY
Sbjct: 350 GKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTY 409

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           + L++  C+ G   DA  + N +   G  P+++T+N+L+  L   G  +    +   M E
Sbjct: 410 SILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKM-E 468

Query: 356 ASHSPTVF--------------TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
              +P++F              +   ++  LC  GL+ +A     Q+      P I TYN
Sbjct: 469 IGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYN 528

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            ++   CK G  N A +L   +     SP  +TY TLI+GL +    E A  ++ QM +N
Sbjct: 529 ILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKN 588

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G +PD   +RT++   CR  ++  A  L  +  +      + A +  I G  + ++V+ A
Sbjct: 589 GCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYLRNIRSQEDEAIK-AIEGYFEKQEVEKA 647

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++ L  M       D   ++  +  +       EA K++  L E+KV
Sbjct: 648 VRGLLEMDFKLNDFDLGPYAIWLIGLCQTRRVGEALKIFLILEEYKV 694



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 100/428 (23%), Positives = 201/428 (46%), Gaps = 15/428 (3%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD +    ++  LI+ + +  A  V   M+    +P+  T+++++ GLCK G ++ A+ L
Sbjct: 159 PDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHL 218

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
            DEM+  G  PD  TY  ++  +  + +   A   +      G  P  +T   L+   C 
Sbjct: 219 FDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCM 278

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A  +L     +G   D+  Y+ L+    +  +Y+D  L+   ++   ++P+   
Sbjct: 279 LDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYL 338

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y  ++  L   G      ++L+ M E+   P    YN+LI G C  GL+  A +   ++ 
Sbjct: 339 YTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEIS 398

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
             +C P++ TY+ ++  +C+ G+  +A ++ + +    C P  +T+N+LIDGL K G +E
Sbjct: 399 RHDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLE 458

Query: 450 KAMVLYGQMMENGISP--------------DDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           KA +L+ + ME G +P              D  + + ++   C +  + +A  +L ++  
Sbjct: 459 KAHLLFYK-MEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLAD 517

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G+      Y ++++G CK    + A ++   M      PD   + T++  +      E+
Sbjct: 518 SGDAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREED 577

Query: 556 AYKLWQKL 563
           AYK++ ++
Sbjct: 578 AYKVFDQM 585



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 117/462 (25%), Positives = 203/462 (43%), Gaps = 13/462 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N IL     +  L  A  +   M + N +P+      LI GL +   ++ A  + 
Sbjct: 160 DVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDALHLF 219

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G +PD  TY +++ GLC+  ++  A  L D+M  SG  PD +T N +L      
Sbjct: 220 DEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNGFCML 279

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +  +A    +   + G    +  Y+ LI  + +         +   M  +   PD+  Y
Sbjct: 280 DRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLY 339

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             ++    + GK  DA+ ++N +   G+ P+++ YN L+      G       +   ++ 
Sbjct: 340 TIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSLQLEISR 399

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V TY+ILI+G+C+ GL   A   FN+M    C P  VT+N+++  LCK G L +
Sbjct: 400 HDCFPNVKTYSILISGMCRNGLTRDAQEIFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEK 459

Query: 416 ALQL-------------LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           A  L             L L  G S      +   +++ L   G + KA  +  Q+ ++G
Sbjct: 460 AHLLFYKMEIGRNPSLFLRLSQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSG 519

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
            +P   T+  L+ GFC+      A  L +E+  +G       Y  +I+GL + ++ + A 
Sbjct: 520 DAPGIYTYNILVNGFCKLGNFNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAY 579

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +V + M  +   PD  V+ T++  +        A+ LW K +
Sbjct: 580 KVFDQMEKNGCTPDAAVYRTMMTWMCRRMELPRAFSLWLKYL 621



 Score =  147 bits (371), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 105/423 (24%), Positives = 185/423 (43%), Gaps = 48/423 (11%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
            + +++    K G    A+     M    C PDV TYN IL  +        A+  +   
Sbjct: 128 AFFVLIKVYLKMGLTDKAMETFGSMRDFDCTPDVYTYNMILDVLIQKNFLLLALTVYTRM 187

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           ++  C P + T++ILI+ +CK   +  A+ + D+M   G  PD  TY  +++  C+  + 
Sbjct: 188 MKLNCLPNVATFSILIDGLCKSGNVKDALHLFDEMTQRGILPDAFTYCVVISGLCRSKRV 247

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLL-----------------------HSLGSRGC--- 342
           DDA  + + +   G+ P+ +T N LL                       + L  RG    
Sbjct: 248 DDAYRLFDKMKDSGVGPDFVTCNALLNGFCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCL 307

Query: 343 ---------WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
                    ++ V  +   M E +  P V+ Y I++ GL + G V  A+   N+M     
Sbjct: 308 IRGLFRAKRYEDVQLLYRKMIEDNVKPDVYLYTIMMKGLAEAGKVRDALELLNEMTESGV 367

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD V YN ++   C  G+L+EA  L   ++   C P + TY+ LI G+ + G    A  
Sbjct: 368 VPDTVCYNVLIKGFCDMGLLSEARSLQLEISRHDCFPNVKTYSILISGMCRNGLTRDAQE 427

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK--EIGKR-----------GNKM 500
           ++ +M + G  P  +T  +LI G C+  Q+E+A  L    EIG+             + +
Sbjct: 428 IFNEMEKLGCYPSAVTFNSLIDGLCKTGQLEKAHLLFYKMEIGRNPSLFLRLSQGPSHVL 487

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            +++ + ++  LC S  +  A ++L  +  S   P    ++ +V      G    AYKL+
Sbjct: 488 DSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGNFNGAYKLF 547

Query: 561 QKL 563
           +++
Sbjct: 548 REM 550



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 75/298 (25%), Positives = 137/298 (45%)

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           ++ + +  Q G+    + L+ +   G       +  L+    K G  D A+    ++   
Sbjct: 96  LITDLLINQNGLELYCQTLEALKNGGIKVHNDAFFVLIKVYLKMGLTDKAMETFGSMRDF 155

Query: 322 GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
              P+  TYN +L  L  +        +   M + +  P V T++ILI+GLCK G V  A
Sbjct: 156 DCTPDVYTYNMILDVLIQKNFLLLALTVYTRMMKLNCLPNVATFSILIDGLCKSGNVKDA 215

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           ++ F++M  +   PD  TY  V+  LC+   +++A +L   +  S   P  +T N L++G
Sbjct: 216 LHLFDEMTQRGILPDAFTYCVVISGLCRSKRVDDAYRLFDKMKDSGVGPDFVTCNALLNG 275

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
                 +++A  L     ++G   D   +  LI G  RA + E+   L +++ +   K  
Sbjct: 276 FCMLDRVDEAFSLLRLFEKDGYVLDVRGYSCLIRGLFRAKRYEDVQLLYRKMIEDNVKPD 335

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
              Y +++ GL ++ KV  A+++L  M  S   PD   ++ ++K   D G+  EA  L
Sbjct: 336 VYLYTIMMKGLAEAGKVRDALELLNEMTESGVVPDTVCYNVLIKGFCDMGLLSEARSL 393



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 37/143 (25%), Positives = 64/143 (44%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           S GP    D  +  K+++  C  G +  A +++  +A     P  +    L+ G  ++  
Sbjct: 480 SQGPSHVLDSASLQKMVEQLCDSGLIHKAYRILMQLADSGDAPGIYTYNILVNGFCKLGN 539

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
              A K+ + M   G  PDT+TY  ++ GL +  +   A  + D+M  +GC PD   Y T
Sbjct: 540 FNGAYKLFREMQFKGLSPDTVTYGTLINGLLRFQREEDAYKVFDQMEKNGCTPDAAVYRT 599

Query: 228 ILRTMFDNGKFKQAIGFWKDQLR 250
           ++  M    +  +A   W   LR
Sbjct: 600 MMTWMCRRMELPRAFSLWLKYLR 622


>gi|242069919|ref|XP_002450236.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
 gi|241936079|gb|EES09224.1| hypothetical protein SORBIDRAFT_05g002360 [Sorghum bicolor]
          Length = 833

 Score =  192 bits (487), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 129/494 (26%), Positives = 232/494 (46%), Gaps = 51/494 (10%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQI---PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           N +++ FC+  +  +A +L+ +MA    +   PD      +I G  R  +++KA  +   
Sbjct: 270 NTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLFLQ 329

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G  PD +TYN ++ GLCK   +  A A+  +M   G +P   TYN ++      GK
Sbjct: 330 MIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLSTGK 389

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCK--QCGIAR-------------------A 276
           +K+ +   ++       P    Y +L++ +CK  +C  AR                   A
Sbjct: 390 WKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMIDEA 449

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN------------------- 317
           + + D M  +G SP++V Y +L++  CK G+ DDA+L  N                    
Sbjct: 450 VCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEE 509

Query: 318 ----LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
               +L +G+  + + +NTL+  L   G      +++++M      P V +YN L++G C
Sbjct: 510 LVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHC 569

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH--LLNGSSCSPC 431
             G  D A    + MVS   +P+  TYNT+L   CK   +++A  LL   L+NG   +P 
Sbjct: 570 LTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGP--TPD 627

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
           ++TYNT++ GL + G   +A  LY  M+ +    D  T+  ++ G C+ + V+EA  + +
Sbjct: 628 VVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQ 687

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
            +  +G ++    + ++I  L K  K + A+ +   + +    PD   +  I + +  +G
Sbjct: 688 SLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEG 747

Query: 552 MTEEAYKLWQKLIE 565
             EE   L+  + E
Sbjct: 748 SLEELGVLFSAMEE 761



 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/464 (26%), Positives = 223/464 (48%), Gaps = 52/464 (11%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-ALLDEMSVS 216
           LI    R+ R+E    V  +++ +G   + I +N ++ GLC   ++  A   LL  M   
Sbjct: 201 LIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEF 260

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGF---WKDQLRKGCPPYLITYTILIEQVCKQCGI 273
           GC P+V++YNT+++   +  + ++A+       D     CPP +++Y  +I    ++  +
Sbjct: 261 GCTPNVVSYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQV 320

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
            +A  +   M   G  PD+VTYN++++  CK    D A  V   +L +G++P++ TYN L
Sbjct: 321 DKAYNLFLQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCL 380

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG----------------- 376
           +H   S G W  V ++L+ M+     P  F Y +L++ LCK G                 
Sbjct: 381 IHGYLSTGKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGI 440

Query: 377 ----LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC- 431
               ++D A+  F++M  +   P++V Y  ++ ALCK G +++A+   + +       C 
Sbjct: 441 KPDAMIDEAVCIFDKMRQQGLSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCT 500

Query: 432 ----------------------LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
                                 ++ +NTL+  L ++G + +A  L   M+  G+ PD I+
Sbjct: 501 VEKWEKAEELVFEMLDQGIRLDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVIS 560

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + TL+ G C   + +EA  LL  +   G K     Y  ++HG CK++++D A  +L  M+
Sbjct: 561 YNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREML 620

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI----EWKVF 569
            +   PD   ++TI+  +   G   EA +L+  +I    +W ++
Sbjct: 621 MNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMY 664



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 112/410 (27%), Positives = 188/410 (45%), Gaps = 37/410 (9%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L   C  G+ T+A  + D + R+   PD                I++A  +   M   G
Sbjct: 415 LLDYLCKNGRCTEARNIFDSVIRKGIKPD--------------AMIDEAVCIFDKMRQQG 460

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAI-----------------------ALLDEMSVSGCE 219
             P+ + Y  ++  LCK G++  AI                        L+ EM   G  
Sbjct: 461 LSPNVVNYGALIDALCKLGRVDDAILKFNQMINEVYGLCTVEKWEKAEELVFEMLDQGIR 520

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
            DV+ +NT++  +   G+  +A    +  LR G  P +I+Y  L++  C       A ++
Sbjct: 521 LDVVVFNTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKL 580

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           LD M   G  P+  TYN+L++  CK  + DDA  ++  +L  G  P+ +TYNT+LH L  
Sbjct: 581 LDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQ 640

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G +    ++   M  +     ++TYNI++NGLCK   VD A   F  + SK  Q  I+T
Sbjct: 641 TGRFSEAKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIIT 700

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           +N ++GAL K G   +A+ L   ++     P + TY  + + L K+G +E+  VL+  M 
Sbjct: 701 FNIMIGALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAME 760

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           ENG +P+      L+  F     +  A   L ++ ++   +  S   ++I
Sbjct: 761 ENGTAPNSRMLNALVRRFLHRGDISRAGAYLSKLDEKNFSLEASTASMLI 810



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 77/272 (28%), Positives = 137/272 (50%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++ + C  G++ +A +LI++M R    PD      L+ G     R ++A+K+L +MV 
Sbjct: 527 NTLMCDLCREGRVMEAQRLIELMLRVGVRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVS 586

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+  TYN ++ G CK  +I  A +LL EM ++G  PDV+TYNTIL  +F  G+F +
Sbjct: 587 IGLKPNEFTYNTLLHGYCKARRIDDAYSLLREMLMNGPTPDVVTYNTILHGLFQTGRFSE 646

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   + + +       + TY I++  +CK   +  A ++   +  +G    I+T+N ++ 
Sbjct: 647 AKELYLNMINSRTQWDMYTYNIILNGLCKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIG 706

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K GK +DA+ +   + + G+ P+  TY  +  +L   G  + +  +   M E   +P
Sbjct: 707 ALLKGGKKEDAMDLFATISAYGLVPDVETYCLIAENLIKEGSLEELGVLFSAMEENGTAP 766

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
                N L+      G + RA    +++  KN
Sbjct: 767 NSRMLNALVRRFLHRGDISRAGAYLSKLDEKN 798



 Score =  130 bits (326), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 84/299 (28%), Positives = 144/299 (48%), Gaps = 13/299 (4%)

Query: 254 PPYLITYTILIEQVCKQCGIARAIEV-----LDDMAIEGCS----PDIVTYNSLVNFSCK 304
           P  +  +  L+  V +  G    +E      L D  +  CS    PD  TY+ L+   C+
Sbjct: 148 PASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVAPDRCTYSILIGCFCR 207

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVF 363
            G+ +    V   +L  G   N I +N LL  L  ++   +A + +L  M E   +P V 
Sbjct: 208 MGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNILLWRMPEFGCTPNVV 267

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSK---NCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +YN L+ G C     + A+   + M      +C PD+V+YNTV+    +EG +++A  L 
Sbjct: 268 SYNTLVKGFCNENRAEEALELLHVMADDQGLSCPPDVVSYNTVINGFFREGQVDKAYNLF 327

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++TYNT+IDGL K   +++A  ++ QM++ G+ P + T+  LI G+   
Sbjct: 328 LQMIDRGIPPDVVTYNTVIDGLCKAQVVDRAKAVFQQMLDKGVKPSNGTYNCLIHGYLST 387

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
            + +E V LL+E+     +     Y L++  LCK+ +   A  + + +I    KPD  +
Sbjct: 388 GKWKEVVRLLEEMSTHDLEPDCFIYALLLDYLCKNGRCTEARNIFDSVIRKGIKPDAMI 446



 Score =  101 bits (252), Expect = 9e-19,   Method: Compositional matrix adjust.
 Identities = 69/258 (26%), Positives = 122/258 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  + N ++   C  G+  +A+KL+D+M      P+      L+ G  +  RI+ A 
Sbjct: 554 VRPDVISYNTLVDGHCLTGRTDEAAKLLDVMVSIGLKPNEFTYNTLLHGYCKARRIDDAY 613

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ M+M+G  PD +TYN ++ GL + G+   A  L   M  S  + D+ TYN IL  +
Sbjct: 614 SLLREMLMNGPTPDVVTYNTILHGLFQTGRFSEAKELYLNMINSRTQWDMYTYNIILNGL 673

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N    +A   ++    KG   ++IT+ I+I  + K      A+++   ++  G  PD+
Sbjct: 674 CKNNCVDEAFKMFQSLCSKGLQLHIITFNIMIGALLKGGKKEDAMDLFATISAYGLVPDV 733

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY  +     K+G  ++  ++ + +   G  PNS   N L+     RG        L  
Sbjct: 734 ETYCLIAENLIKEGSLEELGVLFSAMEENGTAPNSRMLNALVRRFLHRGDISRAGAYLSK 793

Query: 353 MNEASHSPTVFTYNILIN 370
           ++E + S    T ++LI+
Sbjct: 794 LDEKNFSLEASTASMLIS 811



 Score = 50.8 bits (120), Expect = 0.002,   Method: Compositional matrix adjust.
 Identities = 37/158 (23%), Positives = 75/158 (47%), Gaps = 10/158 (6%)

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM------VLYGQMME---NGIS 464
           ++AL+L  LL   +    +  +N L+  +++       +       L+ +M+    + ++
Sbjct: 133 HDALKLFDLLLPHARPASVTAFNHLLTAVSRASGRHSTLESQLGISLFDRMVRECSDKVA 192

Query: 465 PDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           PD  T+  LI  FCR  ++E    +   I K G ++ +  +  ++ GLC +K++D A  +
Sbjct: 193 PDRCTYSILIGCFCRMGRLEHGFAVFGLILKTGWRVNHIVFNQLLKGLCDAKRLDEATNI 252

Query: 525 LEL-MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
           L   M      P+   ++T+VK   ++   EEA +L  
Sbjct: 253 LLWRMPEFGCTPNVVSYNTLVKGFCNENRAEEALELLH 290


>gi|2462828|gb|AAB72163.1| hypothetical protein [Arabidopsis thaliana]
          Length = 1152

 Score =  191 bits (486), Expect = 6e-46,   Method: Compositional matrix adjust.
 Identities = 130/444 (29%), Positives = 215/444 (48%), Gaps = 15/444 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           +E  E T N ++  F   GK+ +A +    M RR+      +  N LI G  +    + A
Sbjct: 306 IEFSEVTYNILINGFSKNGKMEEARRFHGDM-RRSGFAVTPYSFNPLIEGYCKQGLFDDA 364

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             V   M+ +G  P T TYN+ +  LC  G+I  A  LL  M+     PDV++YNT++  
Sbjct: 365 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHG 420

Query: 232 MFDNGKFKQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
               GKF +A   + D LR G   P ++TY  LI+ +C+   +  A  + ++M  +   P
Sbjct: 421 YIKMGKFVEASLLF-DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFP 479

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D++TY +LV    K G    A  V + +L +G++P+   Y T   ++G     D+ DK  
Sbjct: 480 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT--RAVGELRLGDS-DKAF 536

Query: 351 DIMNEA----SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            +  E      H+P +  YN+ I+GLCK G + +AI    ++      PD VTY TV+  
Sbjct: 537 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 596

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
             + G    A  L   +      P +ITY  LI G AK G +E+A     +M + G+ P+
Sbjct: 597 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 656

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +TH  L++G C+A  ++EA   L ++ + G      +Y ++I   C  +K +  +++ +
Sbjct: 657 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 716

Query: 527 LMISSRYKPDDTVFSTIVKKVADD 550
            M+    +PD      + K +  D
Sbjct: 717 EMLDKEIEPDGYTHRALFKHLEKD 740



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 128/503 (25%), Positives = 219/503 (43%), Gaps = 69/503 (13%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRI-EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           M R+  +P    C N++  ++R  R+  KAS V + M+  G +P  IT+N M+    K G
Sbjct: 231 MIRKGFLPSVRNC-NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 289

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
            +     +  EM     E   +TYN ++     NGK ++A  F  D  R G      ++ 
Sbjct: 290 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 349

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEG-------------------------------CSP 290
            LIE  CKQ     A  V D+M   G                                +P
Sbjct: 350 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP 409

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+V+YN+L++   K GK+ +A L+ ++L +  + P+ +TYNTL+  L   G  +   ++ 
Sbjct: 410 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 469

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD-------------- 396
           + M      P V TY  L+ G  K G +  A   +++M+ K  +PD              
Sbjct: 470 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 529

Query: 397 ----------------------IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
                                 +  YN  +  LCK G L +A++    +      P  +T
Sbjct: 530 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 589

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y T+I G  + G  + A  LY +M+   + P  IT+  LI+G  +A ++E+A     E+ 
Sbjct: 590 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 649

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           KRG +     +  +++G+CK+  +D A + L  M      P+   ++ ++ K  D    E
Sbjct: 650 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE 709

Query: 555 EAYKLWQKLIEWKVFEKGTTLLA 577
           E  KL++++++ ++   G T  A
Sbjct: 710 EVVKLYKEMLDKEIEPDGYTHRA 732



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 190/402 (47%), Gaps = 5/402 (1%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           EK     + M+  G +P     N+++  L     +  A A+ + M   G  P VIT+NT+
Sbjct: 222 EKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM 281

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L + F  G  ++    W +  R+      +TY ILI    K   +  A     DM   G 
Sbjct: 282 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGF 341

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +    ++N L+   CKQG +DDA  V + +L+ G+ P + TYN  + +L   G  D   +
Sbjct: 342 AVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 401

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M     +P V +YN L++G  K G    A   F+ + + +  P IVTYNT++  LC
Sbjct: 402 LLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 457

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           + G L  A +L   +      P +ITY TL+ G  K G +  A  +Y +M+  GI PD  
Sbjct: 458 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 517

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKSKKVDMAIQVLEL 527
            + T   G  R    ++A  L +E+    +   + + Y + I GLCK   +  AI+    
Sbjct: 518 AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 577

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           +      PD   ++T+++   ++G  + A  L+ +++  +++
Sbjct: 578 IFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 619



 Score = 74.7 bits (182), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 91/186 (48%)

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K  + ++ + SF +M+ K   P +   N VL  L    M+N+A  +   +      P +I
Sbjct: 217 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 276

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           T+NT++D   K G +E+   ++ +M    I   ++T+  LI GF +  ++EEA     ++
Sbjct: 277 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 336

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            + G  +   ++  +I G CK    D A  V + M+++   P  + ++  +  + D G  
Sbjct: 337 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 396

Query: 554 EEAYKL 559
           ++A +L
Sbjct: 397 DDAREL 402


>gi|297817834|ref|XP_002876800.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297322638|gb|EFH53059.1| hypothetical protein ARALYDRAFT_484139 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1010

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 115/440 (26%), Positives = 212/440 (48%), Gaps = 1/440 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G + +A +    M R    P    C  L+    ++ + +   +  + M+ +G  P   TY
Sbjct: 39  GMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKRFFKDMIGAGAKPTVFTY 98

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N+M+  +CK G + +A  L +EM   G  PD +TYN+++      G+    + F+++   
Sbjct: 99  NIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEMKD 158

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
             C P +ITY  LI   CK   + + +E   +M   G  P++V+Y++LV+  CK+G    
Sbjct: 159 MCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQ 218

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+    ++   G+ PN  TY +L+ +    G      ++ + M +      V TY  LI+
Sbjct: 219 AIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALID 278

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCS 429
           GLC +      ++  ++MV  + +  +VT+  ++  LCK  ++++A+     + N     
Sbjct: 279 GLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQ 338

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
                Y  +IDGL K   +E A  L+ QM + G+ PD   + +L+ G  +   V EA+ L
Sbjct: 339 ANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALAL 398

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             ++ + G K+   AY  ++ GL    ++  A   LE MI     PD+ +  +++KK  +
Sbjct: 399 RDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYE 458

Query: 550 DGMTEEAYKLWQKLIEWKVF 569
            G   EA +L   L++ ++ 
Sbjct: 459 LGCINEAVELQSYLMKHQLL 478



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 104/417 (24%), Positives = 193/417 (46%), Gaps = 1/417 (0%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           +P F     L   LI +  +E+A +    M      P T + N ++    K G+      
Sbjct: 22  VPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVKR 81

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
              +M  +G +P V TYN ++  M   G  + A G +++   +G  P  +TY  +I+   
Sbjct: 82  FFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFG 141

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   +   +   ++M    C PD++TYN+L+N  CK GK    +     +   G++PN +
Sbjct: 142 KVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVV 201

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           +Y+TL+ +    G      K    M      P  +TY  LI+  CK G +  A    N+M
Sbjct: 202 SYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEM 261

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           +    + ++VTY  ++  LC      E L LL  +        ++T+  LIDGL K   +
Sbjct: 262 LQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLV 321

Query: 449 EKAMVLYGQMMEN-GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            KA+  +G++  + G+  +   +  +I G C+ +QVE A  L +++ ++G     +AY  
Sbjct: 322 SKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTS 381

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           ++ G  K   V  A+ + + M+ +  K D   ++++V  ++     ++A    +++I
Sbjct: 382 LMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMI 438



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 99/384 (25%), Positives = 168/384 (43%), Gaps = 36/384 (9%)

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C P    ++ +   + D G  ++AI  +    R    P   +   L+ +  K        
Sbjct: 21  CVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTDGVK 80

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
               DM   G  P + TYN +++  CK+G  + A  +   +  RG+ P+++TYN+++   
Sbjct: 81  RFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGF 140

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
           G  G  D      + M +    P V TYN LIN  CK+G + + +  F +M     +P++
Sbjct: 141 GKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNV 200

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V+Y+T++ A CKEGM+ +A++    +      P   TY +LID   K G +  A  L  +
Sbjct: 201 VSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANE 260

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI-----------------GKRGNKM 500
           M++ G+  + +T+  LI G C  +   E + LL E+                 G   NK+
Sbjct: 261 MLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKL 320

Query: 501 RNSA-------------------YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            + A                   Y  +I GLCK  +V+ A  + E M      PD T ++
Sbjct: 321 VSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYT 380

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
           +++      G   EA  L  K++E
Sbjct: 381 SLMDGNFKQGNVLEALALRDKMVE 404



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 75/314 (23%), Positives = 142/314 (45%)

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           R  C P    +  L   +     +  AI+    M      P   + N L++   K GK D
Sbjct: 18  RNVCVPGFGVFDALFSVLIDLGMVEEAIQCFSKMKRFRVFPKTRSCNGLLHKFAKLGKTD 77

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
                  +++  G +P   TYN ++  +   G  +A   + + M      P   TYN +I
Sbjct: 78  GVKRFFKDMIGAGAKPTVFTYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMI 137

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +G  K G +D  +  F +M    C+PD++TYN ++   CK G L + L+    +  +   
Sbjct: 138 DGFGKVGRLDDTVCFFEEMKDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLK 197

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P +++Y+TL+D   K+G M++A+  Y  M   G+ P++ T+ +LI  +C+   + +A  L
Sbjct: 198 PNVVSYSTLVDAFCKEGMMQQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRL 257

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             E+ + G +     Y  +I GLC  +     + +L+ M+    K     F  ++  +  
Sbjct: 258 ANEMLQVGVEWNVVTYTALIDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCK 317

Query: 550 DGMTEEAYKLWQKL 563
           + +  +A   + ++
Sbjct: 318 NKLVSKAIDYFGRI 331



 Score =  118 bits (296), Expect = 8e-24,   Method: Compositional matrix adjust.
 Identities = 98/406 (24%), Positives = 164/406 (40%), Gaps = 69/406 (16%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G +  A  L + M  R  IPD     ++I G  ++ R++      + M
Sbjct: 97  TYNIMIDCMCKEGDVEAARGLFEEMKFRGLIPDTVTYNSMIDGFGKVGRLDDTVCFFEEM 156

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 PD ITYN ++   CK G++   +    EM  +G +P+V++Y+T++      G  
Sbjct: 157 KDMCCEPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMM 216

Query: 239 KQAIGFWKDQLRKGCPPY-----------------------------------LITYTIL 263
           +QAI F+ D  R G  P                                    ++TYT L
Sbjct: 217 QQAIKFYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTAL 276

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+ +C        + +LD+M        +VT+  L++  CK           N L+S+  
Sbjct: 277 IDGLCGWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCK-----------NKLVSK-- 323

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
                                A+D    I N+         Y  +I+GLCK   V+ A  
Sbjct: 324 ---------------------AIDYFGRISNDFGLQANAAIYTAMIDGLCKGNQVEAATT 362

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            F QM  K   PD   Y +++    K+G + EAL L   +  +     L+ Y +L+ GL+
Sbjct: 363 LFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDKMVETGMKLDLLAYTSLVWGLS 422

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
               ++KA     +M+  GI PD++   +++        + EAV+L
Sbjct: 423 HCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGCINEAVEL 468



 Score = 94.0 bits (232), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 70/311 (22%), Positives = 135/311 (43%), Gaps = 1/311 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++  FC  GKL    +    M R    P+      L+    +   +++A K
Sbjct: 162 EPDVITYNALINCFCKFGKLPKGLEFFREMKRNGLKPNVVSYSTLVDAFCKEGMMQQAIK 221

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
               M   G VP+  TY  ++   CK G +  A  L +EM   G E +V+TY  ++  + 
Sbjct: 222 FYVDMRRVGLVPNEYTYTSLIDAYCKIGNLSDAFRLANEMLQVGVEWNVVTYTALIDGLC 281

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDI 292
                 + +    + +       ++T+ +LI+ +CK   +++AI+    ++ + G   + 
Sbjct: 282 GWENPTEGLHLLDEMVELDIKVTVVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANA 341

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y ++++  CK  + + A  +   +  +G+ P+   Y +L+     +G       + D 
Sbjct: 342 AIYTAMIDGLCKGNQVEAATTLFEQMAQKGLVPDRTAYTSLMDGNFKQGNVLEALALRDK 401

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E      +  Y  L+ GL     + +A +   +M+ +   PD V   +VL    + G 
Sbjct: 402 MVETGMKLDLLAYTSLVWGLSHCNQLQKARSFLEEMIGEGIHPDEVLCISVLKKHYELGC 461

Query: 413 LNEALQLLHLL 423
           +NEA++L   L
Sbjct: 462 INEAVELQSYL 472


>gi|115449873|ref|NP_001048572.1| Os02g0824000 [Oryza sativa Japonica Group]
 gi|113538103|dbj|BAF10486.1| Os02g0824000 [Oryza sativa Japonica Group]
          Length = 1013

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 216/444 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  G++  A  ++D+M      P+       I    R   +E+A  + + MV 
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G + D +T + +V GLC+ G+   A AL  EM   G  P+ +TY T++ ++   G+ K+
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            +    + + +G    L+TYT L++ + KQ       + L     +  SP+ VTY  L++
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK    D+A  V+  +  + + PN +T++++++    RG  D   +   +M E   +P
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY  LI+G  K+   D A+  ++ M+ +  + +    ++++  L + G + EA+ L 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              +GS  S   + Y TLIDGL K G M  A     ++M+  + PD + +   I   C  
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            + +EA   L E+   G K   S Y  +I   C+  +   A+++L  M  S  KP+   +
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           +T+V  +   G  E+A  L  +++
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMV 651



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 128/482 (26%), Positives = 229/482 (47%), Gaps = 10/482 (2%)

Query: 79  SSESHVLAVNKKLRGLTITKKSHDPSLPSS----DGPFVENDEKTNNKILQNFCSRGKLT 134
           SS    +A N  L  L+    +H P++ +       PF   D  T N +L   C  G++ 
Sbjct: 98  SSRPTTVAYNILLAALS--DHAHAPAVLAEMCKRGVPF---DGVTVNTLLAGLCRNGQVD 152

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
            A+ L D     + + D      LI G  R+     A  V   M   G   D + YN +V
Sbjct: 153 AAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            G C+ GQ+ +A  +LD M  +G +P+V TY   +         ++A   ++  +R G  
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
             ++T + L+  +C+    + A  +  +M   G +P+ VTY +L++   K G+  + + +
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +  ++SRG+  + +TY  L+  LG +G  D V   L      + SP   TY +LI+ LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
              VD A     +M  K+  P++VT+++V+    K G+L++A +   ++     +P ++T
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y TLIDG  K    + A+ +Y  M+  G+  +     +L+ G  +  ++EEA+ L K+  
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
             G  + +  Y  +I GL K+  +  A +  + ++     PD  V++  +  +   G  +
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFK 571

Query: 555 EA 556
           EA
Sbjct: 572 EA 573



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 208/445 (46%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  F  RG L  A++   +M  R   P+      LI G  +    + A +V   M
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   +    + +V GL + G+I  A+AL  + S SG   D + Y T++  +F  G  
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F ++ + +   P  + Y + I  +C       A   L +M   G  PD  TYN++
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C++G+   A+ +++ +    ++PN ITYNTL+  L   G  +    +L+ M  A  
Sbjct: 596 IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP+  T+  ++    +   +D  ++    M++     DI  YNT+L  LC  GM  +A  
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATV 715

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  + GS  +P  IT+N LI G  K   ++ A   Y QM+   ISP+  T  TL+ G  
Sbjct: 716 VLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLE 775

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              ++ EA  +L E+ K G +  N  Y ++  G  K      A+++   M+   + P  +
Sbjct: 776 SVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVS 835

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++ ++      GM  +A +L++ +
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDM 860



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 208/446 (46%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ +    G+  +   L+  M  R  + D      L+  L +  + ++    L+  +   
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TY +++  LCK   +  A  +L EM      P+V+T+++++      G   +A 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            + +    +G  P ++TY  LI+   K  G   A+EV  DM  EG   +    +SLVN  
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            + GK ++A+ +  +    G+  + + Y TL+  L   G      K    + + +  P  
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             YN+ IN LC  G    A +   +M +   +PD  TYNT++ + C++G   +AL+LLH 
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  SS  P LITYNTL+ GL   G +EKA  L  +M+  G SP  +THR ++    ++ +
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++  +D+ + +   G     + Y  ++  LC       A  VLE M+ S   PD   F+ 
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++         + A+  + +++   +
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNI 760



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 206/411 (50%), Gaps = 5/411 (1%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMS 214
            L+ GL R  +++ A+ +       GG+   D I +N ++ G C+ G   +A+++ D M+
Sbjct: 140 TLLAGLCRNGQVDAAAALAD---RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G   DV+ YNT++      G+   A G        G  P + TYT  I   C+  G+ 
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A ++ + M   G   D+VT ++LV   C+ G++ +A  +   +   G  PN +TY TL+
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLI 316

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            SL   G    +  +L  M        + TY  L++ L K G  D   ++    +S N  
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+ VTY  ++ ALCK   ++EA Q+L  +   S SP ++T++++I+G  K+G ++KA   
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              M E GI+P+ +T+ TLI GF +    + A+++  ++   G K+       +++GL +
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + K++ A+ + +    S    D   ++T++  +   G    A+K  Q+L++
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 115/392 (29%), Positives = 191/392 (48%), Gaps = 6/392 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N + QN    GK+ +A  L    +      D      LI GL +   +  A K  Q ++ 
Sbjct: 492 NGLRQN----GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
              +PD + YN+ +  LC  G+ + A + L EM   G +PD  TYNT++ +    G+  +
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    +       P LITY  L+  +     + +A  +L++M   G SP  +T+  ++ 
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 301 FSCKQGKYDDAVLVINN-LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
            +C Q +  D +L I+  +++ G+  +   YNTLL  L   G       +L+ M  +  +
Sbjct: 668 -ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   T+N LI G CK   +D A  ++ QM+ +N  P+I T+NT+LG L   G + EA  +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +  S   P  +TY+ L  G  K+    +AM LY +M+  G  P   T+  LI  F +
Sbjct: 787 LIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           A  + +A +L K++ KRG    +  Y +++ G
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSG 878



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 96/369 (26%), Positives = 156/369 (42%), Gaps = 35/369 (9%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           + G  +  D      ++      G +  A K    +  RN +PD       I  L  + +
Sbjct: 510 ASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGK 569

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
            ++A   L  M   G  PD  TYN M+   C++G+   A+ LL EM +S  +P++ITYNT
Sbjct: 570 FKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNT 629

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT---------------------------- 259
           ++  +F  G  ++A     + +  G  P  +T                            
Sbjct: 630 LVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAG 689

Query: 260 -------YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
                  Y  L++ +C      +A  VL++M   G +PD +T+N+L+   CK    D+A 
Sbjct: 690 LHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAF 749

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
                +L + + PN  T+NTLL  L S G       +L  M ++   P   TY+IL  G 
Sbjct: 750 ATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGH 809

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
            K      A+  + +MV K   P + TYN ++    K GM+ +A +L   +      P  
Sbjct: 810 GKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTS 869

Query: 433 ITYNTLIDG 441
            TY+ L+ G
Sbjct: 870 CTYDILVSG 878



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 176/399 (44%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI  L +   +++A +VL  M      P+ +T++ ++ G  KRG +  A      M   G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P+V+TY T++   F       A+  + D L +G          L+  + +   I  A+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +  D +  G S D V Y +L++   K G    A      L+ R M P+++ YN  ++ L
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G +      L  M      P   TYN +I   C+ G   +A+   ++M   + +P++
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +TYNT++  L   G + +A  LL+ +  +  SP  +T+  ++   ++   ++  + ++  
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           MM  G+  D   + TL+   C      +A  +L+E+   G       +  +I G CKS  
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           +D A      M+     P+   F+T++  +   G   EA
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 151/350 (43%), Gaps = 39/350 (11%)

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           L +   P  + Y IL+  +      A A  VL +M   G   D VT N+L+   C+ G+ 
Sbjct: 95  LLRSSRPTTVAYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQV 151

Query: 309 DDAVL----------------------------------VINNLLSRGMEPNSITYNTLL 334
           D A                                    V + + ++G+  + + YNTL+
Sbjct: 152 DAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                 G  DA   +LD+M EA   P V TY   I   C+   V+ A + +  MV     
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            D+VT + ++  LC++G  +EA  L   ++    +P  +TY TLID LAK G  ++ + L
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            G+M+  G+  D +T+  L+    +  + +E  D L+             Y ++I  LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA--YKLWQK 562
           +  VD A QVL  M      P+   FS+++      G+ ++A  YK   K
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 11/215 (5%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           + N L+   C+  L+  AI      + ++ +P  V YN +L AL        A  +L  +
Sbjct: 75  SLNALLYSHCRLRLLRPAI-----ALLRSSRPTTVAYNILLAALSDHA---HAPAVLAEM 126

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP-DDITHRTLIWGFCRADQ 482
                    +T NTL+ GL + G ++ A  L  +    GI   D I   TLI G+CR   
Sbjct: 127 CKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRVGD 184

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
              A+ +   +  +G  M    Y  ++ G C++ +VD A  VL++M  +   P+   ++ 
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
            +         EEA+ L++ ++   V     TL A
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279



 Score = 39.7 bits (91), Expect = 3.9,   Method: Compositional matrix adjust.
 Identities = 30/121 (24%), Positives = 53/121 (43%), Gaps = 10/121 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI- 177
           T N +L    S G++ +A  ++  M +    P+     NL   ++     ++++KV  + 
Sbjct: 766 TFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPN-----NLTYDILATGHGKQSNKVEAMR 820

Query: 178 ----MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
               MV  G VP   TYN ++    K G +  A  L  +M   G  P   TY+ ++   +
Sbjct: 821 LYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWY 880

Query: 234 D 234
           D
Sbjct: 881 D 881


>gi|48716316|dbj|BAD22929.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|48717088|dbj|BAD22861.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
          Length = 933

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 216/444 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  G++  A  ++D+M      P+       I    R   +E+A  + + MV 
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G + D +T + +V GLC+ G+   A AL  EM   G  P+ +TY T++ ++   G+ K+
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            +    + + +G    L+TYT L++ + KQ       + L     +  SP+ VTY  L++
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK    D+A  V+  +  + + PN +T++++++    RG  D   +   +M E   +P
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY  LI+G  K+   D A+  ++ M+ +  + +    ++++  L + G + EA+ L 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              +GS  S   + Y TLIDGL K G M  A     ++M+  + PD + +   I   C  
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            + +EA   L E+   G K   S Y  +I   C+  +   A+++L  M  S  KP+   +
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           +T+V  +   G  E+A  L  +++
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMV 651



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 128/489 (26%), Positives = 231/489 (47%), Gaps = 10/489 (2%)

Query: 79  SSESHVLAVNKKLRGLTITKKSHDPSLPSS----DGPFVENDEKTNNKILQNFCSRGKLT 134
           SS    +A N  L  L+    +H P++ +       PF   D  T N +L   C  G++ 
Sbjct: 98  SSRPTTVAYNILLAALS--DHAHAPAVLAEMCKRGVPF---DGVTVNTLLAGLCRNGQVD 152

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
            A+ L D     + + D      LI G  R+     A  V   M   G   D + YN +V
Sbjct: 153 AAAALADRGGGIHAL-DVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            G C+ GQ+ +A  +LD M  +G +P+V TY   +         ++A   ++  +R G  
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
             ++T + L+  +C+    + A  +  +M   G +P+ VTY +L++   K G+  + + +
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +  ++SRG+  + +TY  L+  LG +G  D V   L      + SP   TY +LI+ LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
              VD A     +M  K+  P++VT+++V+    K G+L++A +   ++     +P ++T
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVT 451

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y TLIDG  K    + A+ +Y  M+  G+  +     +L+ G  +  ++EEA+ L K+  
Sbjct: 452 YGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDAS 511

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
             G  + +  Y  +I GL K+  +  A +  + ++     PD  V++  +  +   G  +
Sbjct: 512 GSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFK 571

Query: 555 EAYKLWQKL 563
           EA     ++
Sbjct: 572 EAKSFLTEM 580



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 208/445 (46%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  F  RG L  A++   +M  R   P+      LI G  +    + A +V   M
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   +    + +V GL + G+I  A+AL  + S SG   D + Y T++  +F  G  
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F ++ + +   P  + Y + I  +C       A   L +M   G  PD  TYN++
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C++G+   A+ +++ +    ++PN ITYNTL+  L   G  +    +L+ M  A  
Sbjct: 596 IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP+  T+  ++    +   +D  ++    M++     DI  YNT+L  LC  GM  +A  
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATV 715

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  + GS  +P  IT+N LI G  K   ++ A   Y QM+   ISP+  T  TL+ G  
Sbjct: 716 VLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLE 775

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              ++ EA  +L E+ K G +  N  Y ++  G  K      A+++   M+   + P  +
Sbjct: 776 SVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVS 835

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++ ++      GM  +A +L++ +
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDM 860



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 212/444 (47%), Gaps = 6/444 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N + QN    GK+ +A  L    +      D      LI GL +   +  A K  Q ++ 
Sbjct: 492 NGLRQN----GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
              +PD + YN+ +  LC  G+ + A + L EM   G +PD  TYNT++ +    G+  +
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    +       P LITY  L+  +     + +A  +L++M   G SP  +T+  ++ 
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 301 FSCKQGKYDDAVLVINN-LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
            +C Q +  D +L I+  +++ G+  +   YNTLL  L   G       +L+ M  +  +
Sbjct: 668 -ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   T+N LI G CK   +D A  ++ QM+ +N  P+I T+NT+LG L   G + EA  +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +  S   P  +TY+ L  G  K+    +AM LY +M+  G  P   T+  LI  F +
Sbjct: 787 LIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A  + +A +L K++ KRG    +  Y +++ G  + +      + L+ M    + P    
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
            S I +  +  GMT +A +L + L
Sbjct: 907 LSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 208/446 (46%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ +    G+  +   L+  M  R  + D      L+  L +  + ++    L+  +   
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TY +++  LCK   +  A  +L EM      P+V+T+++++      G   +A 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            + +    +G  P ++TY  LI+   K  G   A+EV  DM  EG   +    +SLVN  
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            + GK ++A+ +  +    G+  + + Y TL+  L   G      K    + + +  P  
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             YN+ IN LC  G    A +   +M +   +PD  TYNT++ + C++G   +AL+LLH 
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  SS  P LITYNTL+ GL   G +EKA  L  +M+  G SP  +THR ++    ++ +
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++  +D+ + +   G     + Y  ++  LC       A  VLE M+ S   PD   F+ 
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++         + A+  + +++   +
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNI 760



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 113/411 (27%), Positives = 206/411 (50%), Gaps = 5/411 (1%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVP--DTITYNMMVGGLCKRGQIRSAIALLDEMS 214
            L+ GL R  +++ A+ +       GG+   D I +N ++ G C+ G   +A+++ D M+
Sbjct: 140 TLLAGLCRNGQVDAAAALAD---RGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMT 196

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             G   DV+ YNT++      G+   A G        G  P + TYT  I   C+  G+ 
Sbjct: 197 AQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVE 256

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A ++ + M   G   D+VT ++LV   C+ G++ +A  +   +   G  PN +TY TL+
Sbjct: 257 EAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLI 316

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
            SL   G    +  +L  M        + TY  L++ L K G  D   ++    +S N  
Sbjct: 317 DSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLS 376

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P+ VTY  ++ ALCK   ++EA Q+L  +   S SP ++T++++I+G  K+G ++KA   
Sbjct: 377 PNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEY 436

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              M E GI+P+ +T+ TLI GF +    + A+++  ++   G K+       +++GL +
Sbjct: 437 KRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQ 496

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + K++ A+ + +    S    D   ++T++  +   G    A+K  Q+L++
Sbjct: 497 NGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 109/428 (25%), Positives = 177/428 (41%), Gaps = 49/428 (11%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           + G  +  D      ++      G +  A K    +  RN +PD       I  L  + +
Sbjct: 510 ASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGK 569

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
            ++A   L  M   G  PD  TYN M+   C++G+   A+ LL EM +S  +P++ITYNT
Sbjct: 570 FKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNT 629

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT---------------------------- 259
           ++  +F  G  ++A     + +  G  P  +T                            
Sbjct: 630 LVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAG 689

Query: 260 -------YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
                  Y  L++ +C      +A  VL++M   G +PD +T+N+L+   CK    D+A 
Sbjct: 690 LHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHLDNAF 749

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
                +L + + PN  T+NTLL  L S G       +L  M ++   P   TY+IL  G 
Sbjct: 750 ATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGH 809

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
            K      A+  + +MV K   P + TYN ++    K GM+ +A +L   +      P  
Sbjct: 810 GKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGVHPTS 869

Query: 433 ITYNTLIDGLAK-------KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
            TY+ L+ G ++       K C++        M E G SP   T   +   F +     +
Sbjct: 870 CTYDILVSGWSRIRNGTEVKKCLK-------DMKEKGFSPSKGTLSFICRAFSKPGMTWQ 922

Query: 486 AVDLLKEI 493
           A  LLK +
Sbjct: 923 AQRLLKNL 930



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 176/399 (44%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI  L +   +++A +VL  M      P+ +T++ ++ G  KRG +  A      M   G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P+V+TY T++   F       A+  + D L +G          L+  + +   I  A+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +  D +  G S D V Y +L++   K G    A      L+ R M P+++ YN  ++ L
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G +      L  M      P   TYN +I   C+ G   +A+   ++M   + +P++
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +TYNT++  L   G + +A  LL+ +  +  SP  +T+  ++   ++   ++  + ++  
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           MM  G+  D   + TL+   C      +A  +L+E+   G       +  +I G CKS  
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           +D A      M+     P+   F+T++  +   G   EA
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 151/350 (43%), Gaps = 39/350 (11%)

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           L +   P  + Y IL+  +      A A  VL +M   G   D VT N+L+   C+ G+ 
Sbjct: 95  LLRSSRPTTVAYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQV 151

Query: 309 DDAVL----------------------------------VINNLLSRGMEPNSITYNTLL 334
           D A                                    V + + ++G+  + + YNTL+
Sbjct: 152 DAAAALADRGGGIHALDVIGWNTLIAGYCRVGDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                 G  DA   +LD+M EA   P V TY   I   C+   V+ A + +  MV     
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            D+VT + ++  LC++G  +EA  L   ++    +P  +TY TLID LAK G  ++ + L
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            G+M+  G+  D +T+  L+    +  + +E  D L+             Y ++I  LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA--YKLWQK 562
           +  VD A QVL  M      P+   FS+++      G+ ++A  YK   K
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441



 Score = 63.5 bits (153), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 94/215 (43%), Gaps = 11/215 (5%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           + N L+   C+  L+  AI      + ++ +P  V YN +L AL        A  +L  +
Sbjct: 75  SLNALLYSHCRLRLLRPAI-----ALLRSSRPTTVAYNILLAALSDHA---HAPAVLAEM 126

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP-DDITHRTLIWGFCRADQ 482
                    +T NTL+ GL + G ++ A  L  +    GI   D I   TLI G+CR   
Sbjct: 127 CKRGVPFDGVTVNTLLAGLCRNGQVDAAAALADR--GGGIHALDVIGWNTLIAGYCRVGD 184

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
              A+ +   +  +G  M    Y  ++ G C++ +VD A  VL++M  +   P+   ++ 
Sbjct: 185 TPAALSVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTP 244

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
            +         EEA+ L++ ++   V     TL A
Sbjct: 245 FIVYYCRTKGVEEAFDLYEGMVRNGVLLDVVTLSA 279


>gi|125582060|gb|EAZ22991.1| hypothetical protein OsJ_06687 [Oryza sativa Japonica Group]
          Length = 466

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/458 (26%), Positives = 226/458 (49%), Gaps = 41/458 (8%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD +    +++GL    + E+A +++  M+ +   P+ +T+   +   C+ G +  A+ L
Sbjct: 5   PDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQL 64

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF------------------------- 244
           LD+M   GC PDV+ Y+T++    + G   QA+                           
Sbjct: 65  LDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAER 124

Query: 245 WKD-------QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           W+D        +RKGC P   T+++LI  +C+   +  A+EVL+ M   GC PD V YN 
Sbjct: 125 WEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYNI 184

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++N   ++G+ DDA+ ++N+++ +   P+++ +N +L        W    +++  M    
Sbjct: 185 IINSLSERGRVDDALRLLNSMVCK---PDALGFNAVLKGFCRAERWHDASELIAQMFRDD 241

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
                 T+NILI+ LC+ GLV+ A   F QM    C PDIVTY+++L    ++G++  A+
Sbjct: 242 CPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVAI 301

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           QL   +    C P + +YN ++ GL +    E A  L  +M+     P+++T   LI   
Sbjct: 302 QLFRSM---PCKPDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPPNEVTFNILINSL 358

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+   V+ A+++L+++   G+      Y  +I+G  +  ++D A+++L  M     KPD 
Sbjct: 359 CQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLLSTM---SCKPDA 415

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             +++ +K +      ++A +L  +++  K      T 
Sbjct: 416 ISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTF 453



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/351 (31%), Positives = 185/351 (52%), Gaps = 9/351 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  L+  C   +  D  +L+  M R+   P+      LI  L + + ++ A +VL+ M  
Sbjct: 113 NAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEK 172

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PDT+ YN+++  L +RG++  A+ LL+ M    C+PD + +N +L+      ++  
Sbjct: 173 YGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHD 229

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A        R  CP   +T+ ILI+ +C+   +  A +V + M    C+PDIVTY+SL+N
Sbjct: 230 ASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLN 289

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              +QG  + A+ +  ++  +   P+  +YN +L  L     W+   +++  M      P
Sbjct: 290 GFSEQGLVEVAIQLFRSMPCK---PDIFSYNAVLKGLCRAARWEDAGELIAEMVGKDCPP 346

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T+NILIN LC+ GLVDRAI    QM +    PDI TYN ++    ++G L++AL+LL
Sbjct: 347 NEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFSEQGRLDDALKLL 406

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             +   SC P  I+YN+ + GL +    + A  L  +M+ N  +P+++T +
Sbjct: 407 STM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNEVTFK 454



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 104/410 (25%), Positives = 202/410 (49%), Gaps = 41/410 (10%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF----------------------- 152
           +E T    +++FC  G L  A +L+D M R    PD                        
Sbjct: 41  NEVTFATQIRSFCQNGLLDRAVQLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLL 100

Query: 153 --------HFCINL-IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
                     C N  ++GL   +R E   +++  MV  G  P+  T++M++  LC+   +
Sbjct: 101 NTMLCKPNTVCYNAALKGLCIAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLV 160

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
            SA+ +L++M   GCEPD + YN I+ ++ + G+   A+      +   C P  + +  +
Sbjct: 161 DSAVEVLEQMEKYGCEPDTVNYNIIINSLSERGRVDDALRLLNSMV---CKPDALGFNAV 217

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           ++  C+      A E++  M  + C    +T+N L++  C+ G  + A  V   +     
Sbjct: 218 LKGFCRAERWHDASELIAQMFRDDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRC 277

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P+ +TY++LL+    +G    V+  + +       P +F+YN ++ GLC+    + A  
Sbjct: 278 TPDIVTYSSLLNGFSEQG---LVEVAIQLFRSMPCKPDIFSYNAVLKGLCRAARWEDAGE 334

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              +MV K+C P+ VT+N ++ +LC++G+++ A+++L  +     +P + TYN LI+G +
Sbjct: 335 LIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALINGFS 394

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           ++G ++ A+ L   M      PD I++ + + G CRA++ ++A +L+ E+
Sbjct: 395 EQGRLDDALKLLSTM---SCKPDAISYNSTLKGLCRAERWQDAEELVAEM 441



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 76/307 (24%), Positives = 152/307 (49%), Gaps = 35/307 (11%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +PD  TYN+++   C   K+++A  ++  ++     PN +T+ T + S    G  D   +
Sbjct: 4   APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 63

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN---------------------- 386
           +LD M     +P V  Y+ LING  + G VD+A++  N                      
Sbjct: 64  LLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTMLCKPNTVCYNAALKGLCIAE 123

Query: 387 ----------QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
                     +MV K C P+  T++ ++ +LC+  +++ A+++L  +    C P  + YN
Sbjct: 124 RWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTVNYN 183

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            +I+ L+++G ++ A+ L   M+     PD +    ++ GFCRA++  +A +L+ ++ + 
Sbjct: 184 IIINSLSERGRVDDALRLLNSMV---CKPDALGFNAVLKGFCRAERWHDASELIAQMFRD 240

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
              +    + ++I  LC++  V+ A QV E M   R  PD   +S+++   ++ G+ E A
Sbjct: 241 DCPLIEMTFNILIDMLCQNGLVNYATQVFEQMPRYRCTPDIVTYSSLLNGFSEQGLVEVA 300

Query: 557 YKLWQKL 563
            +L++ +
Sbjct: 301 IQLFRSM 307



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 117/206 (56%), Gaps = 3/206 (1%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P  +TYN ++ GLC     + A     +M+   C P+ VT+ T + + C+ G+L+ A+Q
Sbjct: 4   APDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAVQ 63

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  +    C+P ++ Y+TLI+G +++G +++A+ L   M+     P+ + +   + G C
Sbjct: 64  LLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML---CKPNTVCYNAALKGLC 120

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
            A++ E+  +L+ E+ ++G     + + ++I  LC++  VD A++VLE M     +PD  
Sbjct: 121 IAERWEDIGELMAEMVRKGCSPNEATFSMLISSLCQNNLVDSAVEVLEQMEKYGCEPDTV 180

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            ++ I+  +++ G  ++A +L   ++
Sbjct: 181 NYNIIINSLSERGRVDDALRLLNSMV 206



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 68/250 (27%), Positives = 114/250 (45%), Gaps = 37/250 (14%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMV 179
           N +L+ FC   +  DAS+LI  M R +  P      N LI  L +   +  A++V + M 
Sbjct: 215 NAVLKGFCRAERWHDASELIAQMFR-DDCPLIEMTFNILIDMLCQNGLVNYATQVFEQMP 273

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
                PD +TY+ ++ G  ++G +  AI L   M    C+PD+ +YN +L+ +    +++
Sbjct: 274 RYRCTPDIVTYSSLLNGFSEQGLVEVAIQLFRSMP---CKPDIFSYNAVLKGLCRAARWE 330

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG------------ 287
            A     + + K CPP  +T+ ILI  +C++  + RAIEVL+ M   G            
Sbjct: 331 DAGELIAEMVGKDCPPNEVTFNILINSLCQKGLVDRAIEVLEQMPNYGSTPDIFTYNALI 390

Query: 288 --------------------CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                               C PD ++YNS +   C+  ++ DA  ++  +L     PN 
Sbjct: 391 NGFSEQGRLDDALKLLSTMSCKPDAISYNSTLKGLCRAERWQDAEELVAEMLRNKCTPNE 450

Query: 328 ITYNTLLHSL 337
           +T+    H L
Sbjct: 451 VTFKYANHLL 460



 Score = 40.4 bits (93), Expect = 2.8,   Method: Compositional matrix adjust.
 Identities = 26/102 (25%), Positives = 53/102 (51%)

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           ++PD  T+ T++ G C A + EEA +L+ E+ +         +   I   C++  +D A+
Sbjct: 3   VAPDTYTYNTVLKGLCIAKKWEEAEELMAEMIRNRCPPNEVTFATQIRSFCQNGLLDRAV 62

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Q+L+ M      PD  ++ST++   ++ G  ++A  L   ++
Sbjct: 63  QLLDQMPRYGCTPDVVIYSTLINGFSEQGHVDQALDLLNTML 104


>gi|125582652|gb|EAZ23583.1| hypothetical protein OsJ_07284 [Oryza sativa Japonica Group]
          Length = 667

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/448 (26%), Positives = 208/448 (46%), Gaps = 5/448 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++  C  G++ +A +L   M +    PD H    L++GL   +R E+   +L+ M   G
Sbjct: 51  LIEGLCEAGRIDEAVELFGEMDQ----PDMHMYAALVKGLCNAERGEEGLLMLRRMKELG 106

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P T  Y  +V   C+  + + A  +L EM   G  P V+T   ++      G+   A+
Sbjct: 107 WRPSTRAYAAVVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDAL 166

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +    +GC P + TY  L++  C +  + +A+ +L+ M   G +PD VTYN L+   
Sbjct: 167 RVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQ 226

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G  + A  ++  +   G+  +  TYN L+++L   G  D    + D +      P  
Sbjct: 227 CIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNA 286

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+N LINGLCK G  D A     +MVS  C PD  TY++ +  LCK     E L  +  
Sbjct: 287 VTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGE 346

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  + Y  +I  L K+         +G+M+ +G +PD +T+ T +  +C   +
Sbjct: 347 MLQKDVKPSTVNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGR 406

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + EA ++L E+ K G  +   AY  ++ G     + D A+ +L+ M S    P+   +  
Sbjct: 407 LNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFI 466

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKVFE 570
           +++ +    + E+   L    + WK  E
Sbjct: 467 LLRHLVRMRLVEDVLPLTPAGV-WKAIE 493



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/414 (27%), Positives = 199/414 (48%), Gaps = 4/414 (0%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           M R    PD +   +LI G  R ++++ A  +   M + G   D ++Y  ++ GLC+ G+
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           I  A+ L  EM     +PD+  Y  +++ + +  + ++ +   +     G  P    Y  
Sbjct: 61  IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWRPSTRAYAA 116

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           +++  C++     A E+L +M  +G +P +VT  +++N  CK+G+  DA+ V+  +  RG
Sbjct: 117 VVDFRCRERKAKEAEEMLQEMFEKGLAPCVVTCTAVINAYCKEGRMSDALRVLELMKLRG 176

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            +PN  TYN L+    + G       +L+ M     +P   TYN+LI G C  G ++ A 
Sbjct: 177 CKPNVWTYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAF 236

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
                M       D  TYN ++ ALCK+G  ++A  L   L      P  +T+N+LI+GL
Sbjct: 237 RLLRLMEGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGL 296

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            K G  + A     +M+  G +PD  T+ + I   C+    +E +  + E+ ++  K   
Sbjct: 297 CKSGKADIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPST 356

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
             Y +VIH L K +   +  +    M+SS   PD   ++T ++    +G   EA
Sbjct: 357 VNYTIVIHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEA 410



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/441 (26%), Positives = 203/441 (46%), Gaps = 53/441 (12%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++  +C  G+++DA +++++M  R   P+      L++G     ++ KA  +L  M
Sbjct: 148 TCTAVINAYCKEGRMSDALRVLELMKLRGCKPNVWTYNALVQGFCNEGKVHKAMTLLNKM 207

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD +TYN+++ G C  G I SA  LL  M   G   D  TYN ++  +  +G+ 
Sbjct: 208 RACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLMEGDGLIADQYTYNALINALCKDGRT 267

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            QA   +     +G  P  +T+  LI  +CK      A + L+ M   GC+PD  TY+S 
Sbjct: 268 DQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKADIAWKFLEKMVSAGCTPDTYTYSSF 327

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   CK     + +  I  +L + ++P+++ Y  ++H            K+L   N    
Sbjct: 328 IEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIVIH------------KLLKERN---- 371

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
                           YGLV R   ++ +MVS  C PD+VTY T + A C EG LNEA  
Sbjct: 372 ----------------YGLVAR---TWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAEN 412

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  ++ +  +   + YNTL+DG A  G  + A+ +  QM      P+  T+  L+    
Sbjct: 413 VLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLV 472

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R   VE+ + L                     G+ K+ ++     + ++M  + + P+  
Sbjct: 473 RMRLVEDVLPLTPA------------------GVWKAIELTDVFGLFDVMKKNEFLPNSG 514

Query: 539 VFSTIVKKVADDGMTEEAYKL 559
            +S+I++  ++DG TEEA  L
Sbjct: 515 TYSSILEGFSEDGRTEEATSL 535



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 215/483 (44%), Gaps = 52/483 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++Q FC+ GK+  A  L++ M      PD      LIRG      IE A ++L++M
Sbjct: 183 TYNALVQGFCNEGKVHKAMTLLNKMRACGVNPDAVTYNLLIRGQCIDGHIESAFRLLRLM 242

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G + D  TYN ++  LCK G+   A +L D +   G +P+ +T+N+++  +  +GK 
Sbjct: 243 EGDGLIADQYTYNALINALCKDGRTDQACSLFDSLETRGIKPNAVTFNSLINGLCKSGKA 302

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCK----QCGIARAIEVLD------------- 281
             A  F +  +  GC P   TY+  IE +CK    Q G++   E+L              
Sbjct: 303 DIAWKFLEKMVSAGCTPDTYTYSSFIEHLCKMKGSQEGLSFIGEMLQKDVKPSTVNYTIV 362

Query: 282 ------------------DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
                             +M   GC+PD+VTY + +   C +G+ ++A  V+  +   G+
Sbjct: 363 IHKLLKERNYGLVARTWGEMVSSGCNPDVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGV 422

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD---- 379
             +++ YNTL+    S G  D    IL  M   +  P  FTY IL+  L +  LV+    
Sbjct: 423 TVDTMAYNTLMDGHASIGQTDHAVSILKQMTSVASVPNQFTYFILLRHLVRMRLVEDVLP 482

Query: 380 -------RAIN------SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
                  +AI        F+ M      P+  TY+++L    ++G   EA  L+ L+   
Sbjct: 483 LTPAGVWKAIELTDVFGLFDVMKKNEFLPNSGTYSSILEGFSEDGRTEEATSLVSLMKED 542

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           S S     Y  L+    K      A VL   M+++G  P  ++++ L+ G     Q ++A
Sbjct: 543 SISLNEDIYTALVTCFCKSKRYLDAWVLVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKA 602

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            ++      +        ++++I GL K    D++ +++ ++     +P    ++ + ++
Sbjct: 603 KEIFMNSRWKDYSPDEIVWKVIIDGLIKKGHSDISREMIIMLERMNCRPSHQTYAMLTEE 662

Query: 547 VAD 549
           + D
Sbjct: 663 LPD 665



 Score = 58.9 bits (141), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/112 (29%), Positives = 62/112 (55%), Gaps = 6/112 (5%)

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M+ +G  PD  T  +LI G+CR +QV+ A DL  ++  RG      +Y  +I GLC++ +
Sbjct: 1   MVRSGWRPDAYTFNSLIVGYCRTNQVDVARDLFDKMPLRGFAQDVVSYATLIEGLCEAGR 60

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE--WK 567
           +D A+++   M     +PD  +++ +VK + +    EE   + +++ E  W+
Sbjct: 61  IDEAVELFGEMD----QPDMHMYAALVKGLCNAERGEEGLLMLRRMKELGWR 108



 Score = 43.5 bits (101), Expect = 0.27,   Method: Compositional matrix adjust.
 Identities = 53/277 (19%), Positives = 104/277 (37%), Gaps = 52/277 (18%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T    ++ +C  G+L +A  ++  M++     D      L+ G   I + + A  +L
Sbjct: 390 DVVTYTTSMRAYCIEGRLNEAENVLMEMSKNGVTVDTMAYNTLMDGHASIGQTDHAVSIL 449

Query: 176 QIMVMSGGVPDTITYNMMV-----------------GGLCKRGQIRSAIALLDEMSVSGC 218
           + M     VP+  TY +++                  G+ K  ++     L D M  +  
Sbjct: 450 KQMTSVASVPNQFTYFILLRHLVRMRLVEDVLPLTPAGVWKAIELTDVFGLFDVMKKNEF 509

Query: 219 EPDVITYNTILRTMFDNGKFKQAIG-----------------------FWKDQ------- 248
            P+  TY++IL    ++G+ ++A                         F K +       
Sbjct: 510 LPNSGTYSSILEGFSEDGRTEEATSLVSLMKEDSISLNEDIYTALVTCFCKSKRYLDAWV 569

Query: 249 -----LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
                ++ G  P L++Y  L+  +  +    +A E+  +   +  SPD + +  +++   
Sbjct: 570 LVCSMIQHGFIPQLMSYQHLLSGLICEGQTDKAKEIFMNSRWKDYSPDEIVWKVIIDGLI 629

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           K+G  D +  +I  L      P+  TY  L   L  R
Sbjct: 630 KKGHSDISREMIIMLERMNCRPSHQTYAMLTEELPDR 666


>gi|297835856|ref|XP_002885810.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297331650|gb|EFH62069.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 536

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 120/377 (31%), Positives = 198/377 (52%), Gaps = 6/377 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMS 181
           ++ +F  +GKL  A+ L   + +  ++      +N L+  L+++DR+E A K+ +  +  
Sbjct: 144 LVSSFAEKGKLHCATAL---LLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRF 200

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
               DT T+N+++ GLC  G+   A+ LL  MS  GC PD++TYNT+++    + + K+A
Sbjct: 201 QSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKA 260

Query: 242 IGFWKD-QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
              + D +   GC P ++TYT +I   CK   +  A  +LDDM   G  P  VT+N LV+
Sbjct: 261 NEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVD 320

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G+   A  +   ++S G  P+ +T+ +L+      G  +   ++ + MN     P
Sbjct: 321 GYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFP 380

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             FTY+ILIN LCK   + +A     Q+ SK+  P    YN V+   CK G +NEA+ ++
Sbjct: 381 NAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIV 440

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +    C P  IT+  LI G   KG M +A+ ++ +M+  G SPD IT  +L+    +A
Sbjct: 441 EEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA 500

Query: 481 DQVEEAVDLLKEIGKRG 497
              +EA   L +I  +G
Sbjct: 501 GMAKEAYH-LNQIAHKG 516



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 112/380 (29%), Positives = 191/380 (50%), Gaps = 6/380 (1%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTN-----NKILQNFCSRGKLTD 135
           +S  ++ N +L G  ++  +    L  +    +++ E        N +L       ++ D
Sbjct: 130 KSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEVEGCCMVVNSLLNTLVKLDRVED 189

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A KL +   R     D      LIRGL  + + EKA ++L  M   G +PD +TYN ++ 
Sbjct: 190 AMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKAVELLGGMSGFGCLPDIVTYNTLIK 249

Query: 196 GLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
           G CK  +++ A  + D++ S SGC PDV+TY +++      GK ++A     D LR G  
Sbjct: 250 GFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMISGYCKAGKMQEASVLLDDMLRLGIY 309

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P  +T+ +L++   K   +  A E+   M   GC PD+VT+ SL++  C+ G+ +    +
Sbjct: 310 PTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFPDVVTFTSLIDGYCRVGQVNQGFRL 369

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
              + +RGM PN+ TY+ L+++L          ++L  +      P  F YN +I+G CK
Sbjct: 370 WEEMNARGMFPNAFTYSILINALCKENRLLKARELLGQLASKDIIPQPFMYNPVIDGFCK 429

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G V+ AI    +M  K C+PD +T+  ++   C +G + EA+ + H +    CSP  IT
Sbjct: 430 AGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMKGRMFEAVSIFHKMVAIGCSPDKIT 489

Query: 435 YNTLIDGLAKKGCMEKAMVL 454
            ++L+  L K G  ++A  L
Sbjct: 490 VSSLLSCLLKAGMAKEAYHL 509



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 114/406 (28%), Positives = 201/406 (49%), Gaps = 5/406 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL-DEMSVS 216
           L R L +    + A ++ + M   G  P++     +V    ++G++  A ALL     V 
Sbjct: 109 LTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALLLQSYEVE 168

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           GC    +  N++L T+    + + A+  +++ LR        T+ ILI  +C      +A
Sbjct: 169 GC---CMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLCGVGKAEKA 225

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL-LSRGMEPNSITYNTLLH 335
           +E+L  M+  GC PDIVTYN+L+   CK  +   A  + +++  S G  P+ +TY +++ 
Sbjct: 226 VELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTYTSMIS 285

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                G       +LD M      PT  T+N+L++G  K G +  A     +M+S  C P
Sbjct: 286 GYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMISFGCFP 345

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D+VT+ +++   C+ G +N+  +L   +N     P   TY+ LI+ L K+  + KA  L 
Sbjct: 346 DVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSILINALCKENRLLKARELL 405

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
           GQ+    I P    +  +I GFC+A +V EA+ +++E+ K+  K     + ++I G C  
Sbjct: 406 GQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCMK 465

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
            ++  A+ +   M++    PD    S+++  +   GM +EAY L Q
Sbjct: 466 GRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKAGMAKEAYHLNQ 511



 Score = 78.6 bits (192), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 67/250 (26%), Positives = 108/250 (43%), Gaps = 36/250 (14%)

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD------------------------ 396
           + +TYN+L   LCK G+ D A   F  M S    P+                        
Sbjct: 102 SFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCATALL 161

Query: 397 ---------IVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKG 446
                     +  N++L  L K   + +A++L    L   SC+    T+N LI GL   G
Sbjct: 162 LQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCND-TKTFNILIRGLCGVG 220

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI-GKRGNKMRNSAY 505
             EKA+ L G M   G  PD +T+ TLI GFC+++++++A ++  ++    G       Y
Sbjct: 221 KAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDVVTY 280

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +I G CK+ K+  A  +L+ M+     P +  F+ +V   A  G    A ++  K+I 
Sbjct: 281 TSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTFNVLVDGYAKAGEMHTAEEIRGKMIS 340

Query: 566 WKVFEKGTTL 575
           +  F    T 
Sbjct: 341 FGCFPDVVTF 350



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 47/173 (27%), Positives = 87/173 (50%), Gaps = 3/173 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKV 174
           D  T   ++  +C  G++    +L + M  R   P+ F + I LI  L + +R+ KA ++
Sbjct: 346 DVVTFTSLIDGYCRVGQVNQGFRLWEEMNARGMFPNAFTYSI-LINALCKENRLLKAREL 404

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L  +     +P    YN ++ G CK G++  AI +++EM    C+PD IT+  ++     
Sbjct: 405 LGQLASKDIIPQPFMYNPVIDGFCKAGKVNEAIVIVEEMEKKKCKPDKITFTILIIGHCM 464

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
            G+  +A+  +   +  GC P  IT + L+  + K  G+A+    L+ +A +G
Sbjct: 465 KGRMFEAVSIFHKMVAIGCSPDKITVSSLLSCLLKA-GMAKEAYHLNQIAHKG 516



 Score = 57.8 bits (138), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 50/218 (22%), Positives = 85/218 (38%), Gaps = 34/218 (15%)

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP--------------------- 430
           N +    TYN +  +LCK GM + A Q+   +     SP                     
Sbjct: 98  NIRHSFWTYNLLTRSLCKAGMHDLAGQMFECMKSDGISPNSRLLGFLVSSFAEKGKLHCA 157

Query: 431 ------------CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
                       C +  N+L++ L K   +E AM L+ + +      D  T   LI G C
Sbjct: 158 TALLLQSYEVEGCCMVVNSLLNTLVKLDRVEDAMKLFEEHLRFQSCNDTKTFNILIRGLC 217

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL-ELMISSRYKPDD 537
              + E+AV+LL  +   G       Y  +I G CKS ++  A ++  ++  SS   PD 
Sbjct: 218 GVGKAEKAVELLGGMSGFGCLPDIVTYNTLIKGFCKSNELKKANEMFDDVKSSSGCSPDV 277

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             +++++      G  +EA  L   ++   ++    T 
Sbjct: 278 VTYTSMISGYCKAGKMQEASVLLDDMLRLGIYPTNVTF 315


>gi|255661036|gb|ACU25687.1| pentatricopeptide repeat-containing protein [Duranta serratifolia]
          Length = 376

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 191/368 (51%), Gaps = 1/368 (0%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I+ A +V   M  S   PD + YN M+ G  + G+I+    L + M   G + +V+++N 
Sbjct: 6   IDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGSQ-NVVSFNI 64

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++R +FDNG+  +AI  W+   + G     ITY I+I+  CK   I +++ VL+    +G
Sbjct: 65  MMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKG 124

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D   Y++++N  CK+ K D AV V+N ++  G +PN+  YNTL++       +D   
Sbjct: 125 GVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAI 184

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M     SPT+ TY+ LINGLCK      A +   +M+ K  +P ++TY+ ++  L
Sbjct: 185 RVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGL 244

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C+   +  ALQL + +      P +  +N LI GL   G  + A++LY  M     +P+ 
Sbjct: 245 CQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNL 304

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +TH TL+ GF +   +  A+ +   I + G +    +Y + + GLC   ++  AI  L  
Sbjct: 305 VTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHD 364

Query: 528 MISSRYKP 535
            ++ +  P
Sbjct: 365 ALTKKIFP 372



 Score =  161 bits (407), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 105/360 (29%), Positives = 172/360 (47%), Gaps = 7/360 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D    N +L  F   G++ D   L ++M R+       F I ++RGL     ++KA 
Sbjct: 21  VSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKGSQNVVSFNI-MMRGLFDNGEVDKAI 79

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + ++M  SG V D+ITY +++ G CK G I  ++ +L+     G   D   Y+ ++  +
Sbjct: 80  SIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGL 139

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K  +A+      ++ GC P    Y  LI           AI V  +M    CSP I
Sbjct: 140 CKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTI 199

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY++L+N  CK  ++ +A  ++  +L +G +P  ITY+ L+  L  +G    V+  L +
Sbjct: 200 VTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGL-CQG--HKVEMALQL 256

Query: 353 MNEA---SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            N+       P V  +NILI+GLC  G    A+  +  M   NC P++VT+NT++    K
Sbjct: 257 WNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYK 316

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +G +  AL +   +  S   P +I+YN  + GL     +  A++     +   I P  IT
Sbjct: 317 DGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRISFAILFLHDALTKKIFPTIIT 376



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 87/299 (29%), Positives = 154/299 (51%), Gaps = 1/299 (0%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   I  A  V  +MA    SPD V YN+++    + G+  D    +  L+ R    N 
Sbjct: 1   CESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDC-FDLWELMGRKGSQNV 59

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +++N ++  L   G  D    I ++M ++       TY I+I+G CK G ++++++    
Sbjct: 60  VSFNIMMRGLFDNGEVDKAISIWELMKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEI 119

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
              K    D   Y+ ++  LCKE  L++A+ +L+ +  S C P    YNTLI+G      
Sbjct: 120 AEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASK 179

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            + A+ ++ +M     SP  +T+ TLI G C+ ++  EA DL+KE+ ++G K     Y L
Sbjct: 180 FDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSL 239

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           ++ GLC+  KV+MA+Q+   ++S  +KPD  + + ++  +   G T+ A  L+  +  W
Sbjct: 240 LMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHW 298



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 92/368 (25%), Positives = 161/368 (43%), Gaps = 36/368 (9%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C+ G I  A  +  EM+ S   PD + YN +L      G+ K     W+   RKG     
Sbjct: 1   CESGDIDGAKRVYMEMAESKVSPDAVVYNAMLIGFLRVGRIKDCFDLWELMGRKG----- 55

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                          S ++V++N ++      G+ D A+ +   
Sbjct: 56  -------------------------------SQNVVSFNIMMRGLFDNGEVDKAISIWEL 84

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G   +SITY  ++      G  +    +L+I          F Y+ +INGLCK   
Sbjct: 85  MKKSGFVEDSITYGIIIDGFCKNGYINKSLHVLEIAEGKGGVLDAFAYSAMINGLCKEAK 144

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +D+A++  N M+   C+P+   YNT++         ++A+++   +    CSP ++TY+T
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNTLINGFVGASKFDDAIRVFREMGSMDCSPTIVTYHT 204

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+GL K     +A  L  +M+E G  P  IT+  L+ G C+  +VE A+ L  ++  +G
Sbjct: 205 LINGLCKGERFSEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVLSKG 264

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K     + ++IHGLC   K   A+ +   M      P+    +T+++    DG    A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKTQHALMLYFDMNHWNCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 558 KLWQKLIE 565
            +W +++ 
Sbjct: 325 VIWARILR 332



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 6/321 (1%)

Query: 83  HVLAVNKKLRGL----TITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +V++ N  +RGL     + K      L    G FVE D  T   I+  FC  G +  +  
Sbjct: 58  NVVSFNIMMRGLFDNGEVDKAISIWELMKKSG-FVE-DSITYGIIIDGFCKNGYINKSLH 115

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           +++I   +  + D      +I GL +  +++KA  VL  M+ SG  P+   YN ++ G  
Sbjct: 116 VLEIAEGKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKSGCKPNAHVYNTLINGFV 175

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
              +   AI +  EM    C P ++TY+T++  +    +F +A    K+ L KG  P +I
Sbjct: 176 GASKFDDAIRVFREMGSMDCSPTIVTYHTLINGLCKGERFSEAYDLVKEMLEKGWKPCVI 235

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY++L++ +C+   +  A+++ + +  +G  PD+  +N L++  C  GK   A+++  ++
Sbjct: 236 TYSLLMKGLCQGHKVEMALQLWNQVLSKGFKPDVQMHNILIHGLCSVGKTQHALMLYFDM 295

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
                 PN +T+NTL+      G       I   +  +   P + +YNI + GLC    +
Sbjct: 296 NHWNCAPNLVTHNTLMEGFYKDGDIRNALVIWARILRSGLQPDIISYNITLKGLCSCNRI 355

Query: 379 DRAINSFNQMVSKNCQPDIVT 399
             AI   +  ++K   P I+T
Sbjct: 356 SFAILFLHDALTKKIFPTIIT 376


>gi|222623943|gb|EEE58075.1| hypothetical protein OsJ_08937 [Oryza sativa Japonica Group]
          Length = 933

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 119/444 (26%), Positives = 216/444 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  G++  A  ++D+M      P+       I    R   +E+A  + + MV 
Sbjct: 208 NTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVR 267

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G + D +T + +V GLC+ G+   A AL  EM   G  P+ +TY T++ ++   G+ K+
Sbjct: 268 NGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKE 327

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            +    + + +G    L+TYT L++ + KQ       + L     +  SP+ VTY  L++
Sbjct: 328 LLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLID 387

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK    D+A  V+  +  + + PN +T++++++    RG  D   +   +M E   +P
Sbjct: 388 ALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERGINP 447

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TY  LI+G  K+   D A+  ++ M+ +  + +    ++++  L + G + EA+ L 
Sbjct: 448 NVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAMALF 507

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              +GS  S   + Y TLIDGL K G M  A     ++M+  + PD + +   I   C  
Sbjct: 508 KDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCML 567

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            + +EA   L E+   G K   S Y  +I   C+  +   A+++L  M  S  KP+   +
Sbjct: 568 GKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITY 627

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           +T+V  +   G  E+A  L  +++
Sbjct: 628 NTLVAGLFGTGAVEKAKYLLNEMV 651



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/445 (26%), Positives = 208/445 (46%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  F  RG L  A++   +M  R   P+      LI G  +    + A +V   M
Sbjct: 416 TFSSVINGFVKRGLLDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDM 475

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   +    + +V GL + G+I  A+AL  + S SG   D + Y T++  +F  G  
Sbjct: 476 LCEGVKVNKFIVDSLVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDM 535

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A  F ++ + +   P  + Y + I  +C       A   L +M   G  PD  TYN++
Sbjct: 536 PTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTM 595

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +   C++G+   A+ +++ +    ++PN ITYNTL+  L   G  +    +L+ M  A  
Sbjct: 596 IVSHCRKGETAKALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGF 655

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SP+  T+  ++    +   +D  ++    M++     DI  YNT+L  LC  GM  +A  
Sbjct: 656 SPSSLTHRRVLQACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATV 715

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +L  + GS  +P  IT+N LI G  K   ++ A   Y QM+   ISP+  T  TL+ G  
Sbjct: 716 VLEEMLGSGIAPDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLE 775

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              ++ EA  +L E+ K G +  N  Y ++  G  K      A+++   M+   + P  +
Sbjct: 776 SVGRIGEAGTVLIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVS 835

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            ++ ++      GM  +A +L++ +
Sbjct: 836 TYNALISDFTKAGMMTQAKELFKDM 860



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 126/444 (28%), Positives = 212/444 (47%), Gaps = 6/444 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N + QN    GK+ +A  L    +      D      LI GL +   +  A K  Q ++ 
Sbjct: 492 NGLRQN----GKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
              +PD + YN+ +  LC  G+ + A + L EM   G +PD  TYNT++ +    G+  +
Sbjct: 548 RNMLPDAVVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAK 607

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    +       P LITY  L+  +     + +A  +L++M   G SP  +T+  ++ 
Sbjct: 608 ALKLLHEMKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQ 667

Query: 301 FSCKQGKYDDAVLVINN-LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
            +C Q +  D +L I+  +++ G+  +   YNTLL  L   G       +L+ M  +  +
Sbjct: 668 -ACSQSRRLDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIA 726

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P   T+N LI G CK   +D A  ++ QM+ +N  P+I T+NT+LG L   G + EA  +
Sbjct: 727 PDTITFNALILGHCKSSHLDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTV 786

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +  S   P  +TY+ L  G  K+    +AM LY +M+  G  P   T+  LI  F +
Sbjct: 787 LIEMEKSGLEPNNLTYDILATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTK 846

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A  + +A +L K++ KRG    +  Y +++ G  + +      + L+ M    + P    
Sbjct: 847 AGMMTQAKELFKDMQKRGVHPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKGFSPSKGT 906

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
            S I +  +  GMT +A +L + L
Sbjct: 907 LSFICRAFSKPGMTWQAQRLLKNL 930



 Score =  178 bits (451), Expect = 9e-42,   Method: Compositional matrix adjust.
 Identities = 114/446 (25%), Positives = 208/446 (46%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ +    G+  +   L+  M  R  + D      L+  L +  + ++    L+  +   
Sbjct: 315 LIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDN 374

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ +TY +++  LCK   +  A  +L EM      P+V+T+++++      G   +A 
Sbjct: 375 LSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKAT 434

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            + +    +G  P ++TY  LI+   K  G   A+EV  DM  EG   +    +SLVN  
Sbjct: 435 EYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGL 494

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            + GK ++A+ +  +    G+  + + Y TL+  L   G      K    + + +  P  
Sbjct: 495 RQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDA 554

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
             YN+ IN LC  G    A +   +M +   +PD  TYNT++ + C++G   +AL+LLH 
Sbjct: 555 VVYNVFINCLCMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHE 614

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  SS  P LITYNTL+ GL   G +EKA  L  +M+  G SP  +THR ++    ++ +
Sbjct: 615 MKMSSIKPNLITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRR 674

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           ++  +D+ + +   G     + Y  ++  LC       A  VLE M+ S   PD   F+ 
Sbjct: 675 LDVILDIHEWMMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNA 734

Query: 543 IVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++         + A+  + +++   +
Sbjct: 735 LILGHCKSSHLDNAFATYAQMLHQNI 760



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/382 (26%), Positives = 193/382 (50%), Gaps = 1/382 (0%)

Query: 183 GVP-DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G+P D + YN +V G C+ GQ+ +A  +LD M  +G +P+V TY   +         ++A
Sbjct: 199 GLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEA 258

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              ++  +R G    ++T + L+  +C+    + A  +  +M   G +P+ VTY +L++ 
Sbjct: 259 FDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDS 318

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             K G+  + + ++  ++SRG+  + +TY  L+  LG +G  D V   L      + SP 
Sbjct: 319 LAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPN 378

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TY +LI+ LCK   VD A     +M  K+  P++VT+++V+    K G+L++A +   
Sbjct: 379 GVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKR 438

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           ++     +P ++TY TLIDG  K    + A+ +Y  M+  G+  +     +L+ G  +  
Sbjct: 439 MMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNG 498

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++EEA+ L K+    G  + +  Y  +I GL K+  +  A +  + ++     PD  V++
Sbjct: 499 KIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYN 558

Query: 542 TIVKKVADDGMTEEAYKLWQKL 563
             +  +   G  +EA     ++
Sbjct: 559 VFINCLCMLGKFKEAKSFLTEM 580



 Score =  165 bits (418), Expect = 5e-38,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 198/418 (47%), Gaps = 35/418 (8%)

Query: 183 GVP-DTITYNMMVGGLCKRGQIR----------------------------------SAI 207
           GVP D +T N ++ GLC+ GQ+                                   +A+
Sbjct: 130 GVPFDGVTVNTLLAGLCRNGQVDAAAALADRAGGITPWMSSAGTLSLLDIAGFGDTPAAL 189

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
           ++ D M+  G   DV+ YNT++      G+   A G        G  P + TYT  I   
Sbjct: 190 SVADRMTAQGLPMDVVGYNTLVAGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYY 249

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+  G+  A ++ + M   G   D+VT ++LV   C+ G++ +A  +   +   G  PN 
Sbjct: 250 CRTKGVEEAFDLYEGMVRNGVLLDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNH 309

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +TY TL+ SL   G    +  +L  M        + TY  L++ L K G  D   ++   
Sbjct: 310 VTYCTLIDSLAKAGRGKELLSLLGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRF 369

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
            +S N  P+ VTY  ++ ALCK   ++EA Q+L  +   S SP ++T++++I+G  K+G 
Sbjct: 370 ALSDNLSPNGVTYTVLIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGL 429

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           ++KA      M E GI+P+ +T+ TLI GF +    + A+++  ++   G K+       
Sbjct: 430 LDKATEYKRMMKERGINPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDS 489

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +++GL ++ K++ A+ + +    S    D   ++T++  +   G    A+K  Q+L++
Sbjct: 490 LVNGLRQNGKIEEAMALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMD 547



 Score =  155 bits (393), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 106/394 (26%), Positives = 178/394 (45%), Gaps = 8/394 (2%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           + G  +  D      ++      G +  A K    +  RN +PD       I  L  + +
Sbjct: 510 ASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCLCMLGK 569

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
            ++A   L  M   G  PD  TYN M+   C++G+   A+ LL EM +S  +P++ITYNT
Sbjct: 570 FKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNLITYNT 629

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD----M 283
           ++  +F  G  ++A     + +  G  P  +T+     +V + C  +R ++V+ D    M
Sbjct: 630 LVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTH----RRVLQACSQSRRLDVILDIHEWM 685

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G   DI  YN+L+   C  G    A +V+  +L  G+ P++IT+N L+         
Sbjct: 686 MNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSHL 745

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           D        M   + SP + T+N L+ GL   G +  A     +M     +P+ +TY+ +
Sbjct: 746 DNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEAGTVLIEMEKSGLEPNNLTYDIL 805

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
                K+    EA++L   + G    P + TYN LI    K G M +A  L+  M + G+
Sbjct: 806 ATGHGKQSNKVEAMRLYCEMVGKGFVPKVSTYNALISDFTKAGMMTQAKELFKDMQKRGV 865

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
            P   T+  L+ G+ R     E    LK++ ++G
Sbjct: 866 HPTSCTYDILVSGWSRIRNGTEVKKCLKDMKEKG 899



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 96/399 (24%), Positives = 176/399 (44%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI  L +   +++A +VL  M      P+ +T++ ++ G  KRG +  A      M   G
Sbjct: 385 LIDALCKAHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMKERG 444

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             P+V+TY T++   F       A+  + D L +G          L+  + +   I  A+
Sbjct: 445 INPNVVTYGTLIDGFFKFQGQDAALEVYHDMLCEGVKVNKFIVDSLVNGLRQNGKIEEAM 504

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            +  D +  G S D V Y +L++   K G    A      L+ R M P+++ YN  ++ L
Sbjct: 505 ALFKDASGSGLSLDHVNYTTLIDGLFKAGDMPTAFKFGQELMDRNMLPDAVVYNVFINCL 564

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G +      L  M      P   TYN +I   C+ G   +A+   ++M   + +P++
Sbjct: 565 CMLGKFKEAKSFLTEMRNMGLKPDQSTYNTMIVSHCRKGETAKALKLLHEMKMSSIKPNL 624

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +TYNT++  L   G + +A  LL+ +  +  SP  +T+  ++   ++   ++  + ++  
Sbjct: 625 ITYNTLVAGLFGTGAVEKAKYLLNEMVSAGFSPSSLTHRRVLQACSQSRRLDVILDIHEW 684

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           MM  G+  D   + TL+   C      +A  +L+E+   G       +  +I G CKS  
Sbjct: 685 MMNAGLHADITVYNTLLQVLCYHGMTRKATVVLEEMLGSGIAPDTITFNALILGHCKSSH 744

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           +D A      M+     P+   F+T++  +   G   EA
Sbjct: 745 LDNAFATYAQMLHQNISPNIATFNTLLGGLESVGRIGEA 783



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 94/350 (26%), Positives = 153/350 (43%), Gaps = 39/350 (11%)

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK- 307
           L +   P  + Y IL+  +      A A  VL +M   G   D VT N+L+   C+ G+ 
Sbjct: 95  LLRSSRPTTVAYNILLAALSDH---AHAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQV 151

Query: 308 ------------------------------YDD---AVLVINNLLSRGMEPNSITYNTLL 334
                                         + D   A+ V + + ++G+  + + YNTL+
Sbjct: 152 DAAAALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLV 211

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                 G  DA   +LD+M EA   P V TY   I   C+   V+ A + +  MV     
Sbjct: 212 AGFCRAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVL 271

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            D+VT + ++  LC++G  +EA  L   ++    +P  +TY TLID LAK G  ++ + L
Sbjct: 272 LDVVTLSALVAGLCRDGRFSEAYALFREMDKVGAAPNHVTYCTLIDSLAKAGRGKELLSL 331

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            G+M+  G+  D +T+  L+    +  + +E  D L+             Y ++I  LCK
Sbjct: 332 LGEMVSRGVVMDLVTYTALMDWLGKQGKTDEVKDTLRFALSDNLSPNGVTYTVLIDALCK 391

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA--YKLWQK 562
           +  VD A QVL  M      P+   FS+++      G+ ++A  YK   K
Sbjct: 392 AHNVDEAEQVLLEMEEKSISPNVVTFSSVINGFVKRGLLDKATEYKRMMK 441



 Score = 53.9 bits (128), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 54/244 (22%), Positives = 91/244 (37%), Gaps = 50/244 (20%)

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LI  L   GL   AI        +    D  + N +L + C+  +L  A+ LL      S
Sbjct: 52  LIPALATSGLAAAAI--------RFRPADPASLNALLYSHCRLRLLRPAIALLR-----S 98

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV---- 483
             P  + YN L+  L+       A  +  +M + G+  D +T  TL+ G CR  QV    
Sbjct: 99  SRPTTVAYNILLAALSDHA---HAPAVLAEMCKRGVPFDGVTVNTLLAGLCRNGQVDAAA 155

Query: 484 ------------------------------EEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
                                           A+ +   +  +G  M    Y  ++ G C
Sbjct: 156 ALADRAGGITPWMSSAGTLSLLDIAGFGDTPAALSVADRMTAQGLPMDVVGYNTLVAGFC 215

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
           ++ +VD A  VL++M  +   P+   ++  +         EEA+ L++ ++   V     
Sbjct: 216 RAGQVDAARGVLDMMKEAGVDPNVATYTPFIVYYCRTKGVEEAFDLYEGMVRNGVLLDVV 275

Query: 574 TLLA 577
           TL A
Sbjct: 276 TLSA 279


>gi|53793262|dbj|BAD54485.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
          Length = 713

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 111/422 (26%), Positives = 216/422 (51%), Gaps = 4/422 (0%)

Query: 147 NQIPD---FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
            Q+P    F F I +I  L +   + +A  +   M   G +PD +T+N ++ G  K G++
Sbjct: 181 EQLPAPNVFTFNI-VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGEL 239

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                L++EM  SGC+ DV+TYN ++      G+ + A G++    R+G    ++T++  
Sbjct: 240 DEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTF 299

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           ++  CK+  +  A+++   M + G + +  TY  L++ +CK G+ DDA+++++ ++ +G+
Sbjct: 300 VDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGV 359

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
             N +TY  L+  L         + +L +M +A        Y  LI+G       ++A+ 
Sbjct: 360 PLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALG 419

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
             ++M +K  + DI  Y  ++  LC    L+EA  LL  ++ S   P  I Y T++D   
Sbjct: 420 LLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACF 479

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G + +A+ +  +++++G  P+ IT+  LI G C+A  ++EA+    ++   G      
Sbjct: 480 KSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQ 539

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           AY  ++ GLCK+  ++ A+Q+   M+      D  V++ ++      G   +A+ L  K+
Sbjct: 540 AYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKM 599

Query: 564 IE 565
           I+
Sbjct: 600 ID 601



 Score =  185 bits (469), Expect = 7e-44,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 211/448 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +   G+L +  +L++ M R     D      LI    +  R+E A    
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYF 281

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G + + +T++  V   CK G +R A+ L  +M V G   +  TY  ++      
Sbjct: 282 AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKA 341

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   AI    + +R+G P  ++TYT+L++ +CK+  +A A +VL  M   G   + + Y
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY 401

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++        + A+ +++ + ++G+E +   Y  L+  L +    D    +L  M+E
Sbjct: 402 TTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE 461

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P    Y  +++   K G V  AI    +++    QP+++TY  ++  LCK G ++E
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDE 521

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+   + +      P +  Y  L+DGL K GC+ +A+ L+ +M+  G+S D + +  L+ 
Sbjct: 522 AISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLD 581

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+ +   + +A  L  ++   G ++    Y   I G C    +  A +V   MI     P
Sbjct: 582 GYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAP 641

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D  V++ ++ K    G  EEA  L  ++
Sbjct: 642 DRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 140/273 (51%), Gaps = 13/273 (4%)

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++    +G  DDAV  +  +    + PN+ T N +L  L      D   +++  + E
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFE 181

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P VFT+NI+I+ LCK G +  A + F++M    C PD+VT+N+++    K G L+E
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
             QL+  +  S C   ++TYN LI+   K G ME A   +  M   G+  + +T  T + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            FC+   V EA+ L  ++  RG  +    Y  +I G CK+ ++D AI +L+ M+      
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 536 DDTVFSTIV------KKVADDGMTEEAYKLWQK 562
           +   ++ +V      +KVA+    E+  ++ +K
Sbjct: 362 NVVTYTVLVDGLCKERKVAE---AEDVLRMMEK 391



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 110/249 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      ++Q  C+  KL +A  L+  M      P++     ++    +  ++ +A 
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +LQ ++ SG  P+ ITY  ++ GLCK G I  AI+  ++M   G +P+V  Y  ++  +
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG   +A+  + + + KG     + YT L++   KQ  +  A  +   M   G   D+
Sbjct: 549 CKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDL 608

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y   ++  C      +A  V + ++  G+ P+   YN L+      G  +    + D 
Sbjct: 609 FCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDE 668

Query: 353 MNEASHSPT 361
           M     S T
Sbjct: 669 MERVLPSCT 677


>gi|449435418|ref|XP_004135492.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
 gi|449494962|ref|XP_004159696.1| PREDICTED: pentatricopeptide repeat-containing protein At1g13040,
           mitochondrial-like [Cucumis sativus]
          Length = 514

 Score =  191 bits (486), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 129/432 (29%), Positives = 210/432 (48%), Gaps = 7/432 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCINLIRGLIRIDRIEKASKVL 175
           T ++ +   C         +L++ M +   +PD   F+  +NL   L R + +E A K  
Sbjct: 81  TYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNL---LFRENLLELALKFF 137

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV  G  PD +TY ++V  LCK  Q   A+     M   G  PD+     ++  + D 
Sbjct: 138 DEMVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDG 197

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A      +++       + +  L+   CK   I++A+ +   M+  GC PD++TY
Sbjct: 198 GKVDLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITY 257

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N L+NF C     + A   +  +   GMEP+  +YN LL  L      D   K+++ M E
Sbjct: 258 NILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWE 317

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                TV +YN +I  LCK     +A   F +M  K+  PD+ T+ T++ A   EG  + 
Sbjct: 318 KGLCDTV-SYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHI 376

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  LL  +  +   P LI Y T++D   K   +E A  ++  M+E GISPD +++  LI 
Sbjct: 377 AKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIEIGISPDVVSYNALIN 436

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+A +V EA+ L +E+  RG       ++L+I GL + K++ +A QV + M+   Y  
Sbjct: 437 GLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIGGLLRKKELSLACQVWDQMMEKGYTL 496

Query: 536 DDTVFSTIVKKV 547
           D  +  T++K +
Sbjct: 497 DKFLSETLIKAI 508



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 167/367 (45%), Gaps = 1/367 (0%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           K G I  AI + DEM+ S C      YN  +  +    +F  A  ++   + +G      
Sbjct: 21  KVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTPF 80

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY+  I  +C+         +L+DM   G  PDI  +N  +N   ++   + A+   + +
Sbjct: 81  TYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDEM 140

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           +++G EP+ +TY  ++  L     +D   +    M     SP +     L+ GLC  G V
Sbjct: 141 VAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGKV 200

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A       +    + + + +N+++   CK G +++AL +   ++   C P LITYN L
Sbjct: 201 DLAYELTVGEMKGEMKFNNLIFNSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITYNIL 260

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           ++       +E A     +M   G+ PD  ++  L+ G C+A+++++A  L+  + ++G 
Sbjct: 261 LNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWEKG- 319

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                +Y  VI  LCKS     A ++ E M      PD   F+T++K    +G    A  
Sbjct: 320 LCDTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHIAKG 379

Query: 559 LWQKLIE 565
           L Q + +
Sbjct: 380 LLQTMTQ 386



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 95/405 (23%), Positives = 183/405 (45%), Gaps = 5/405 (1%)

Query: 163 IRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV 222
           +++  I++A ++   M  S     +  YN  +G L  R +   A +    M   G     
Sbjct: 20  VKVGLIDEAIRIFDEMTQSDCPVTSRDYNRFIGVLISRSRFDLAESYYSRMIPQGFSLTP 79

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
            TY+  +  + +   F       +D  + G  P +  + I +  + ++  +  A++  D+
Sbjct: 80  FTYSRFISALCEIKNFGLIGRLLEDMKQLGYLPDIWAFNIYLNLLFRENLLELALKFFDE 139

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M  +G  PD+VTY  +V+  CK  +YD AV     ++++G+ P+      L+  L   G 
Sbjct: 140 MVAKGREPDVVTYTIIVDRLCKAKQYDKAVEFWRCMVNKGLSPDMKACTALVVGLCDGGK 199

Query: 343 WDAVDKIL--DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
            D   ++   ++  E   +  +F  N L++G CK G + +A+   + M    C+PD++TY
Sbjct: 200 VDLAYELTVGEMKGEMKFNNLIF--NSLMSGFCKSGRISKALAIKSFMSKHGCEPDLITY 257

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N +L   C   ML  A + +  +      P + +YN L+ GL K   ++KA  L   M E
Sbjct: 258 NILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSYNQLLKGLCKANRLDKAYKLMNTMWE 317

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
            G+  D +++ T+I   C++    +A  L +E+G++        +  +I          +
Sbjct: 318 KGLC-DTVSYNTVIGALCKSFATRKAYRLFEEMGQKDVAPDVGTFATLIKAFLIEGSPHI 376

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           A  +L+ M  +   PD   ++T+V         E A  +++ +IE
Sbjct: 377 AKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEMAQGVFRDMIE 421



 Score =  126 bits (317), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 86/277 (31%), Positives = 132/277 (47%), Gaps = 3/277 (1%)

Query: 96  ITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFC 155
           I+K     S  S  G   E D  T N +L  FC    L  A K +  M R    PD +  
Sbjct: 235 ISKALAIKSFMSKHG--CEPDLITYNILLNFFCDGLMLELAGKSMKKMERIGMEPDVYSY 292

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
             L++GL + +R++KA K++  M    G+ DT++YN ++G LCK    R A  L +EM  
Sbjct: 293 NQLLKGLCKANRLDKAYKLMNTM-WEKGLCDTVSYNTVIGALCKSFATRKAYRLFEEMGQ 351

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
               PDV T+ T+++     G    A G  +   +    P LI YT +++  CK   I  
Sbjct: 352 KDVAPDVGTFATLIKAFLIEGSPHIAKGLLQTMTQTVLIPDLIFYTTVVDYFCKTRKIEM 411

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A  V  DM   G SPD+V+YN+L+N  CK  K  +A+L+   +  RG  P+ +T+  ++ 
Sbjct: 412 AQGVFRDMIEIGISPDVVSYNALINGLCKASKVSEAMLLYEEMQIRGCYPDEVTFKLIIG 471

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            L  +       ++ D M E  ++   F    LI  +
Sbjct: 472 GLLRKKELSLACQVWDQMMEKGYTLDKFLSETLIKAI 508


>gi|15219974|ref|NP_173709.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|193806406|sp|P0C7Q9.1|PPR56_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g22960, mitochondrial; Flags: Precursor
 gi|332192194|gb|AEE30315.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 718

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 133/458 (29%), Positives = 221/458 (48%), Gaps = 15/458 (3%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           +E  E T N ++  F   GK+ +A +    M RR+      +  N LI G  +    + A
Sbjct: 269 IEFSEVTYNILINGFSKNGKMEEARRFHGDM-RRSGFAVTPYSFNPLIEGYCKQGLFDDA 327

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             V   M+ +G  P T TYN+ +  LC  G+I  A  LL  M+     PDV++YNT++  
Sbjct: 328 WGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAA----PDVVSYNTLMHG 383

Query: 232 MFDNGKFKQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
               GKF +A   + D LR G   P ++TY  LI+ +C+   +  A  + ++M  +   P
Sbjct: 384 YIKMGKFVEASLLF-DDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLKEEMTTQLIFP 442

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D++TY +LV    K G    A  V + +L +G++P+   Y T   ++G     D+ DK  
Sbjct: 443 DVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTT--RAVGELRLGDS-DKAF 499

Query: 351 DIMNEA----SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            +  E      H+P +  YN+ I+GLCK G + +AI    ++      PD VTY TV+  
Sbjct: 500 RLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVTYTTVIRG 559

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
             + G    A  L   +      P +ITY  LI G AK G +E+A     +M + G+ P+
Sbjct: 560 YLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMKKRGVRPN 619

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +TH  L++G C+A  ++EA   L ++ + G      +Y ++I   C  +K +  +++ +
Sbjct: 620 VMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWEEVVKLYK 679

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
            M+    +PD      + K +  D  + E   L + L+
Sbjct: 680 EMLDKEIEPDGYTHRALFKHLEKDHESREVEFLERLLL 717



 Score =  173 bits (438), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 127/500 (25%), Positives = 218/500 (43%), Gaps = 69/500 (13%)

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRI-EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRG 201
           M R+  +P    C N++  ++R  R+  KAS V + M+  G +P  IT+N M+    K G
Sbjct: 194 MIRKGFLPSVRNC-NIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTMLDSCFKAG 252

Query: 202 QIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYT 261
            +     +  EM     E   +TYN ++     NGK ++A  F  D  R G      ++ 
Sbjct: 253 DLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGFAVTPYSFN 312

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEG-------------------------------CSP 290
            LIE  CKQ     A  V D+M   G                                +P
Sbjct: 313 PLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARELLSSMAAP 372

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+V+YN+L++   K GK+ +A L+ ++L +  + P+ +TYNTL+  L   G  +   ++ 
Sbjct: 373 DVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLCESGNLEGAQRLK 432

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD-------------- 396
           + M      P V TY  L+ G  K G +  A   +++M+ K  +PD              
Sbjct: 433 EEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGYAYTTRAVGELRL 492

Query: 397 ----------------------IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
                                 +  YN  +  LCK G L +A++    +      P  +T
Sbjct: 493 GDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRKIFRVGLVPDHVT 552

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y T+I G  + G  + A  LY +M+   + P  IT+  LI+G  +A ++E+A     E+ 
Sbjct: 553 YTTVIRGYLENGQFKMARNLYDEMLRKRLYPSVITYFVLIYGHAKAGRLEQAFQYSTEMK 612

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
           KRG +     +  +++G+CK+  +D A + L  M      P+   ++ ++ K  D    E
Sbjct: 613 KRGVRPNVMTHNALLYGMCKAGNIDEAYRYLCKMEEEGIPPNKYSYTMLISKNCDFEKWE 672

Query: 555 EAYKLWQKLIEWKVFEKGTT 574
           E  KL++++++ ++   G T
Sbjct: 673 EVVKLYKEMLDKEIEPDGYT 692



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/402 (27%), Positives = 190/402 (47%), Gaps = 5/402 (1%)

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
           EK     + M+  G +P     N+++  L     +  A A+ + M   G  P VIT+NT+
Sbjct: 185 EKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVITFNTM 244

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           L + F  G  ++    W +  R+      +TY ILI    K   +  A     DM   G 
Sbjct: 245 LDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDMRRSGF 304

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +    ++N L+   CKQG +DDA  V + +L+ G+ P + TYN  + +L   G  D   +
Sbjct: 305 AVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRIDDARE 364

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +L  M     +P V +YN L++G  K G    A   F+ + + +  P IVTYNT++  LC
Sbjct: 365 LLSSMA----APDVVSYNTLMHGYIKMGKFVEASLLFDDLRAGDIHPSIVTYNTLIDGLC 420

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           + G L  A +L   +      P +ITY TL+ G  K G +  A  +Y +M+  GI PD  
Sbjct: 421 ESGNLEGAQRLKEEMTTQLIFPDVITYTTLVKGFVKNGNLSMATEVYDEMLRKGIKPDGY 480

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKSKKVDMAIQVLEL 527
            + T   G  R    ++A  L +E+    +   + + Y + I GLCK   +  AI+    
Sbjct: 481 AYTTRAVGELRLGDSDKAFRLHEEMVATDHHAPDLTIYNVRIDGLCKVGNLVKAIEFQRK 540

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           +      PD   ++T+++   ++G  + A  L+ +++  +++
Sbjct: 541 IFRVGLVPDHVTYTTVIRGYLENGQFKMARNLYDEMLRKRLY 582



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/186 (24%), Positives = 91/186 (48%)

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K  + ++ + SF +M+ K   P +   N VL  L    M+N+A  +   +      P +I
Sbjct: 180 KKSMAEKFLLSFEKMIRKGFLPSVRNCNIVLKVLRDSRMMNKASAVYETMIEHGIMPTVI 239

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           T+NT++D   K G +E+   ++ +M    I   ++T+  LI GF +  ++EEA     ++
Sbjct: 240 TFNTMLDSCFKAGDLERVDKIWLEMKRRNIEFSEVTYNILINGFSKNGKMEEARRFHGDM 299

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            + G  +   ++  +I G CK    D A  V + M+++   P  + ++  +  + D G  
Sbjct: 300 RRSGFAVTPYSFNPLIEGYCKQGLFDDAWGVTDEMLNAGIYPTTSTYNIYICALCDFGRI 359

Query: 554 EEAYKL 559
           ++A +L
Sbjct: 360 DDAREL 365


>gi|242047600|ref|XP_002461546.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
 gi|241924923|gb|EER98067.1| hypothetical protein SORBIDRAFT_02g004520 [Sorghum bicolor]
          Length = 532

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 127/449 (28%), Positives = 220/449 (48%), Gaps = 14/449 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQ----IPDFHFCINLIRGLIRIDRIEKA 171
           D      +L+  C++ + +DA   ++I+ RR       PD      L++GL    + E+A
Sbjct: 47  DAVAFTPLLRTLCAKKRTSDA---MNIVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEA 103

Query: 172 SKVLQIMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           ++++ +M   G    PD ++Y+ ++ G  K G +  A  L  +M   G  P+V+T N+++
Sbjct: 104 AELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVI 163

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
             +       +A    +  + +   P   TY  LI           A+ +L +M+ +G  
Sbjct: 164 DGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQR 223

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++VTYN L++  CK G + +A  + N+++  G +P++ TY +LLH   + G    ++ +
Sbjct: 224 PNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNV 283

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            D+M +        T++I I   CK G +D A  +F +M      PDIVTY TV+  LCK
Sbjct: 284 KDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCK 343

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
            G L++A+     +     SP +IT+ TLI G +  G  EKA  L+ +MM+ GI PD   
Sbjct: 344 IGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRGIPPDVTI 403

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              +I    +  +V EA  L   + + G K    +Y  +IHG   + +V   +++L+ M+
Sbjct: 404 FTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVMKLLDDML 463

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
               KP    F+T++     DGM     K
Sbjct: 464 LIGLKPTAVTFNTLL-----DGMVSMGLK 487



 Score =  176 bits (447), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/451 (26%), Positives = 215/451 (47%), Gaps = 18/451 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARR--NQIPDFHFCINLIRGLIRIDRIEKASK 173
           D  + + +L+  C+  K  +A++LI +MA    N  PD      +I G  +   + KA  
Sbjct: 83  DVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGDVGKAYT 142

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           +   M+  G  P+ +T N ++ GLCK   +  A A+L +M      P+  TYN+++    
Sbjct: 143 LFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYL 202

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            +G++ +A+   K+  R G  P ++TY +LI+ +CK    A A E+ + M   G  PD  
Sbjct: 203 SSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDAT 262

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY SL++    +G   +   V + ++  GM  N  T++  +++    G  D        M
Sbjct: 263 TYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKM 322

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P + TY  +I+GLCK G +D A++ F QM+     P+I+T+ T++      G  
Sbjct: 323 QQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKW 382

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +A +L + +      P +  +  +ID L K+G + +A  L+  M   G  P+ +++ T+
Sbjct: 383 EKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTM 442

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G+  A +V E + LL ++   G K     +  ++ G                M+S   
Sbjct: 443 IHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG----------------MVSMGL 486

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           KPD     T++    +DG  E+   L+++++
Sbjct: 487 KPDVDTCKTLIDSCCEDGRIEDILTLFREML 517



 Score =  162 bits (409), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 119/462 (25%), Positives = 201/462 (43%), Gaps = 55/462 (11%)

Query: 77  EWSSESHVLAVNKKLRGLTITKKSHDPS----LPSSDGPFVENDEKTNNKILQNFCSRGK 132
           E      V + +  L+GL   KK  + +    + + DG     D  + + ++  F   G 
Sbjct: 77  ELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIHGFFKEGD 136

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           +  A  L   M      P+   C ++I GL ++  ++KA  VLQ M+    +P+  TYN 
Sbjct: 137 VGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNS 196

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++ G    GQ   A+ +L EMS  G  P+V+TYN ++  +  +G   +A   +   ++ G
Sbjct: 197 LIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSG 256

Query: 253 CPPYLITY-----------------------------------TILIEQVCKQCGIARAI 277
             P   TY                                   +I I   CK   +  A 
Sbjct: 257 PKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEAS 316

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
                M   G  PDIVTY ++++  CK G+ DDA+     ++  G+ PN IT+ TL+H  
Sbjct: 317 LTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGF 376

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G W+  +++   M +    P V  +  +I+ L K G V  A   F+ M     +P++
Sbjct: 377 SMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNV 436

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V+YNT++      G + E ++LL  +      P  +T+NTL+DG                
Sbjct: 437 VSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDG---------------- 480

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           M+  G+ PD  T +TLI   C   ++E+ + L +E+  + +K
Sbjct: 481 MVSMGLKPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADK 522



 Score =  157 bits (396), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 98/385 (25%), Positives = 189/385 (49%), Gaps = 3/385 (0%)

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
            PD  T+ +++   C  G +    A L ++  +G   D + +  +LRT+    +   A+ 
Sbjct: 10  APDIATFGILISCCCDAGCLNLGFAALGQIIKTGLRADAVAFTPLLRTLCAKKRTSDAMN 69

Query: 244 FWKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVN 300
               ++ + GC P + +Y+ L++ +C +     A E++  MA +G  C PD+V+Y+++++
Sbjct: 70  IVLRRMPELGCTPDVFSYSTLLKGLCAEKKCEEAAELIHMMAEDGDNCPPDVVSYSTVIH 129

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K+G    A  +   +L  G+ PN +T N+++  L      D  + +L  M +    P
Sbjct: 130 GFFKEGDVGKAYTLFCKMLDHGIPPNVVTCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMP 189

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TYN LI+G    G    A+    +M     +P++VTYN ++  LCK G   EA ++ 
Sbjct: 190 NCTTYNSLIHGYLSSGQWTEAVRILKEMSRDGQRPNVVTYNMLIDCLCKSGFHAEAREIF 249

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           + +  S   P   TY +L+ G A +G + +   +   M++NG+  +  T    I+ +C+ 
Sbjct: 250 NSMIQSGPKPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKC 309

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +++EA     ++ + G       Y  VI GLCK  ++D A+     MI     P+   F
Sbjct: 310 GRLDEASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITF 369

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           +T++   +  G  E+A +L+ ++++
Sbjct: 370 TTLIHGFSMYGKWEKAEELFYEMMD 394



 Score =  124 bits (312), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 74/295 (25%), Positives = 149/295 (50%), Gaps = 18/295 (6%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           GP  + D  T   +L  + + G L + + + D+M +     + H     I    +  R++
Sbjct: 256 GP--KPDATTYGSLLHGYATEGNLVEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLD 313

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +AS     M   G +PD +TY  ++ GLCK G++  A++   +M   G  P++IT+ T++
Sbjct: 314 EASLTFIKMQQLGFMPDIVTYTTVIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLI 373

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                 GK+++A   + + + +G PP +  +T +I+++ K+  +  A ++ D M   G  
Sbjct: 374 HGFSMYGKWEKAEELFYEMMDRGIPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAK 433

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P++V+YN++++     G+  + + +++++L  G++P ++T+NTLL  + S G        
Sbjct: 434 PNVVSYNTMIHGYFIAGEVGEVMKLLDDMLLIGLKPTAVTFNTLLDGMVSMGL------- 486

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
                     P V T   LI+  C+ G ++  +  F +M+ K  + D +T N  L
Sbjct: 487 ---------KPDVDTCKTLIDSCCEDGRIEDILTLFREMLGKADKTDTITENIKL 532



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 94/388 (24%), Positives = 168/388 (43%), Gaps = 53/388 (13%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C    +  A  ++  M   + +P+     +LI G +   +  +A ++L+ M
Sbjct: 158 TCNSVIDGLCKVQAMDKAEAVLQQMIDEHIMPNCTTYNSLIHGYLSSGQWTEAVRILKEM 217

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ +TYNM++  LCK G    A  + + M  SG +PD  TY ++L      G  
Sbjct: 218 SRDGQRPNVVTYNMLIDCLCKSGFHAEAREIFNSMIQSGPKPDATTYGSLLHGYATEGNL 277

Query: 239 ------------------------------------KQAIGFWKDQLRKGCPPYLITYTI 262
                                               + ++ F K Q + G  P ++TYT 
Sbjct: 278 VEMNNVKDLMVQNGMRSNHHTFSIEIYAYCKCGRLDEASLTFIKMQ-QLGFMPDIVTYTT 336

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           +I+ +CK   +  A+     M  +G SP+I+T+ +L++     GK++ A  +   ++ RG
Sbjct: 337 VIDGLCKIGRLDDAMSRFCQMIDDGLSPNIITFTTLIHGFSMYGKWEKAEELFYEMMDRG 396

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           + P+   +  ++  L   G      K+ D+M  A   P V +YN +I+G    G V   +
Sbjct: 397 IPPDVTIFTAMIDRLFKEGKVTEAQKLFDLMPRAGAKPNVVSYNTMIHGYFIAGEVGEVM 456

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
              + M+    +P  VT+NT+L     +GM++  L+           P + T  TLID  
Sbjct: 457 KLLDDMLLIGLKPTAVTFNTLL-----DGMVSMGLK-----------PDVDTCKTLIDSC 500

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITH 470
            + G +E  + L+ +M+      D IT 
Sbjct: 501 CEDGRIEDILTLFREMLGKADKTDTITE 528


>gi|414872432|tpg|DAA50989.1| TPA: hypothetical protein ZEAMMB73_390723 [Zea mays]
          Length = 604

 Score =  191 bits (486), Expect = 8e-46,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 209/409 (51%), Gaps = 2/409 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           ++I  L+   + EK  ++   M   G   PDT+TY+ ++   CK G+  SAI LL+EM  
Sbjct: 166 SMIIMLMHEGQYEKVHQLYNEMSTEGHCFPDTVTYSALISAFCKLGRRDSAIQLLNEMKE 225

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            G +P    Y  ++   F       A+  +++   + C P + TYT LI  + K   I  
Sbjct: 226 IGMQPTTKIYTMLIALFFKFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDE 285

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A     +M  EGC PD V  N+++NF  K G+ DDA+ +   + +    P+ +TYNT++ 
Sbjct: 286 AYHFFCEMQREGCRPDTVFMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIK 345

Query: 336 SL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           +L  S+     V    + M E+  SP+ FTY+ILI+G CK   +++A+    +M  K   
Sbjct: 346 ALFESKSRASEVPSWFERMKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFP 405

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P    Y +++ AL K    + A +L   L  +  S     Y  +I  L K G ++ A+ +
Sbjct: 406 PCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINM 465

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M + G +PD   +  L+ G  R   ++EA+  ++ + + G     ++Y ++++GL K
Sbjct: 466 FDEMNKLGCAPDVYAYNALMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAK 525

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +     A+++L  M  S  +PD   ++T++  ++  GM EEA KL +++
Sbjct: 526 TGGPHRAMEMLSNMKQSTVRPDVVSYNTVLGALSHAGMFEEASKLMKEM 574



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 191/402 (47%), Gaps = 5/402 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  FC  G+   A +L++ M      P       LI    + +    A  + 
Sbjct: 196 DTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIYTMLIALFFKFNDAHGALSLF 255

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      PD  TY  ++ GL K G+I  A     EM   GC PD +  N ++  +   
Sbjct: 256 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMINFLGKA 315

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPDI 292
           G+   A+  +++     C P ++TY  +I+ + +    +RA EV    + M   G SP  
Sbjct: 316 GRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFE--SKSRASEVPSWFERMKESGISPSS 373

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY+ L++  CK  + + A++++  +  +G  P    Y +L+ +LG    +D   ++   
Sbjct: 374 FTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE 433

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + E   S +   Y ++I  L K G +D AIN F++M    C PD+  YN ++  L + GM
Sbjct: 434 LKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGM 493

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EAL  +  +    C P + +YN +++GLAK G   +AM +   M ++ + PD +++ T
Sbjct: 494 LDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNT 553

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           ++     A   EEA  L+KE+   G +     Y  ++  + K
Sbjct: 554 VLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGK 595



 Score =  182 bits (462), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 108/355 (30%), Positives = 182/355 (51%), Gaps = 4/355 (1%)

Query: 132 KLTDASKLIDIMAR-RNQI--PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
           K  DA   + +    R+Q   PD      LIRGL +  RI++A      M   G  PDT+
Sbjct: 244 KFNDAHGALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTV 303

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
             N M+  L K G++  A+ L  EM    C P V+TYNTI++ +F++      +  W ++
Sbjct: 304 FMNNMINFLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFER 363

Query: 249 LRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
           +++ G  P   TY+ILI+  CK   + +A+ +L++M  +G  P    Y SL++   K  +
Sbjct: 364 MKESGISPSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKR 423

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           YD A  +   L       ++  Y  ++  LG  G  D    + D MN+   +P V+ YN 
Sbjct: 424 YDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNA 483

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           L++GL + G++D A+++  +M    C PDI +YN +L  L K G  + A+++L  +  S+
Sbjct: 484 LMSGLARTGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQST 543

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
             P +++YNT++  L+  G  E+A  L  +M   G   D IT+ +++    + D 
Sbjct: 544 VRPDVVSYNTVLGALSHAGMFEEASKLMKEMNTLGFEYDLITYSSILEAIGKVDH 598



 Score =  148 bits (373), Expect = 9e-33,   Method: Compositional matrix adjust.
 Identities = 108/376 (28%), Positives = 179/376 (47%), Gaps = 46/376 (12%)

Query: 232 MFDNGKF-KQAIG-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-C 288
           M  N K  +QAI  F++ + RK C P    Y  +I  +  +    +  ++ ++M+ EG C
Sbjct: 135 MLGNAKMVRQAITIFYQIKTRK-CQPIAQAYNSMIIMLMHEGQYEKVHQLYNEMSTEGHC 193

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD VTY++L++  CK G+ D A+ ++N +   GM+P +  Y T+L +L  +  ++    
Sbjct: 194 FPDTVTYSALISAFCKLGRRDSAIQLLNEMKEIGMQPTTKIY-TMLIALFFK--FNDAHG 250

Query: 349 ILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
            L +  E  H    P VFTY  LI GL K G +D A + F +M  + C+PD V  N ++ 
Sbjct: 251 ALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFCEMQREGCRPDTVFMNNMIN 310

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNT---------------------------- 437
            L K G L++A++L   +    C P ++TYNT                            
Sbjct: 311 FLGKAGRLDDAMKLFQEMETLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 370

Query: 438 --------LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
                   LIDG  K   MEKAM+L  +M E G  P    + +LI    +A + + A +L
Sbjct: 371 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 430

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            +E+ +         Y ++I  L K+ ++D AI + + M      PD   ++ ++  +A 
Sbjct: 431 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 490

Query: 550 DGMTEEAYKLWQKLIE 565
            GM +EA    +++ E
Sbjct: 491 TGMLDEALSTMRRMQE 506


>gi|115444031|ref|NP_001045795.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|41052573|dbj|BAD07755.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113535326|dbj|BAF07709.1| Os02g0132100 [Oryza sativa Japonica Group]
 gi|125537962|gb|EAY84357.1| hypothetical protein OsI_05732 [Oryza sativa Indica Group]
 gi|125580699|gb|EAZ21630.1| hypothetical protein OsJ_05259 [Oryza sativa Japonica Group]
          Length = 871

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 142/522 (27%), Positives = 236/522 (45%), Gaps = 70/522 (13%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +LQ  C+ G++  A ++ D M  RN+   F F I L RG  R  R   A  VL
Sbjct: 149 DVFTRNILLQALCAAGRMELARRVFDAMPERNE---FSFGI-LARGYCRAGRSMDALGVL 204

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M       + +  N +V G C+ GQ+  A  L++ M   G  P+V+T+N  +  +   
Sbjct: 205 DSM----PTMNLVVCNTVVAGFCREGQVDEAERLVERMRDEGLAPNVVTFNARISALCKA 260

Query: 236 GKFKQAIGFWKD---QLRKGCP-PYLITYTILIEQVCK--------------QCG----- 272
           G+   A   + D   +  +G P P  +T+ +++   C+              +CG     
Sbjct: 261 GRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRR 320

Query: 273 ----------------IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
                           +  A E+L +MA EG  P+  TYN +V+  CK+GK  D   V +
Sbjct: 321 VESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVED 380

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            + S  M P+ +TY +LLH+  S G   A ++ILD M +   +P  FTYN+L+  L K G
Sbjct: 381 FVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAG 440

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK-----------EGMLNEALQLLHLLN- 424
            +  A     +M  K    D  + N ++  LC+           +GM NE    L  L  
Sbjct: 441 RITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGY 500

Query: 425 -----------GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
                         C P  ITY+TL+  L K+G  ++A     +M+   ISPD + + T 
Sbjct: 501 SFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTF 560

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G+C+  +   AV +L+++ K+G K     Y L+I G  +    D  ++++  M     
Sbjct: 561 IHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGI 620

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
            P+   +++++K   + GM  +A  L  ++++ ++    T+ 
Sbjct: 621 CPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSF 662



 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 131/495 (26%), Positives = 229/495 (46%), Gaps = 68/495 (13%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E +E +   + + +C  G+  DA  ++D M   N +     C  ++ G  R  ++++A +
Sbjct: 178 ERNEFSFGILARGYCRAGRSMDALGVLDSMPTMNLV----VCNTVVAGFCREGQVDEAER 233

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS------------------V 215
           +++ M   G  P+ +T+N  +  LCK G++  A  + ++M                   +
Sbjct: 234 LVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVML 293

Query: 216 SG-CEPDVI--------------------TYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
           SG CE  ++                    +YN  L  +  NG   +A    ++   +G  
Sbjct: 294 SGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQ 353

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC-SPDIVTYNSLVNFSCKQGKYDDAVL 313
           P   TY I+++ +CK+ G A  +  ++D    G  +PD+VTY SL++  C +G    A  
Sbjct: 354 PNSYTYNIIVDGLCKE-GKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANR 412

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           +++ +  +G  PNS TYN LL SL   G     +++L+ M+E  +S    + NI+I+GLC
Sbjct: 413 ILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLC 472

Query: 374 KYGLVDRAINSFNQM-----------------------VSKNCQPDIVTYNTVLGALCKE 410
           +   +D A++  + M                        SK C PD +TY+T++ ALCKE
Sbjct: 473 RNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKE 532

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G  +EA + L  + G   SP  + Y+T I G  K G    A+ +   M + G  P   T+
Sbjct: 533 GRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTY 592

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             LIWGF      +E + L+ E+  +G       Y  +I   C+   V+ A+ +L+ M+ 
Sbjct: 593 NLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQ 652

Query: 531 SRYKPDDTVFSTIVK 545
           +   P+ T F  ++K
Sbjct: 653 NEIVPNITSFELLIK 667



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 121/515 (23%), Positives = 237/515 (46%), Gaps = 59/515 (11%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T + +L  FC  G + +A  L+DIM     +         + GL+R   + +A ++L
Sbjct: 285 DQVTFDVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELL 344

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQ----------IRSAIA----------------- 208
           + M   G  P++ TYN++V GLCK G+          ++S +                  
Sbjct: 345 REMAHEGVQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSE 404

Query: 209 --------LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
                   +LDEM+  GC P+  TYN +L++++  G+  +A    +    KG      + 
Sbjct: 405 GNAAAANRILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASC 464

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEG-----------------------CSPDIVTYNS 297
            I+I+ +C+   +  A++++D M  EG                       C PD +TY++
Sbjct: 465 NIIIDGLCRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYST 524

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           LV+  CK+G++D+A   +  ++ + + P+S+ Y+T +H     G      K+L  M +  
Sbjct: 525 LVSALCKEGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKG 584

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P+  TYN+LI G  +    D  +   ++M  K   P+++TYN+++ + C+ GM+N+A+
Sbjct: 585 CKPSTRTYNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAM 644

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            LL  +  +   P + ++  LI    K      A  ++   +       ++ +  +    
Sbjct: 645 PLLDEMLQNEIVPNITSFELLIKAFCKTSDFSAAQRVFDASLST-CGQKEVLYSLMCTQL 703

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
               +  EA+++L+ + +    +    Y+ +I GLCK  +VD   ++L+L++   Y  D 
Sbjct: 704 STYGRWLEAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDP 763

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKG 572
             F  ++  +++ G  +    L QK++E    + G
Sbjct: 764 AAFMPVIDALSERGKKQHVDMLSQKMMEMAERDNG 798



 Score =  169 bits (428), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 124/478 (25%), Positives = 224/478 (46%), Gaps = 30/478 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI----PDFHFCINLIRGLIRIDRIEKASKV 174
           T N  +   C  G++ DA ++ + M  + +     PD      ++ G      +++A  +
Sbjct: 249 TFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCEAGMVDEARVL 308

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           + IM   G +    +YN  + GL + G +  A  LL EM+  G +P+  TYN I+  +  
Sbjct: 309 VDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYTYNIIVDGLCK 368

Query: 235 NGKFKQAIGFWKDQLRKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
            GK    +   +D ++ G   P ++TYT L+   C +   A A  +LD+MA +GC+P+  
Sbjct: 369 EGKAFD-VRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMAQKGCAPNSF 427

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TYN L+    K G+  +A  ++  +  +G   ++ + N ++  L      D    I+D M
Sbjct: 428 TYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLDMAMDIVDGM 487

Query: 354 -NEASHS----------------------PTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
            NE S +                      P   TY+ L++ LCK G  D A     +M+ 
Sbjct: 488 WNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEAKKKLLEMIG 547

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           K+  PD V Y+T +   CK G  + A+++L  +    C P   TYN LI G  +K   ++
Sbjct: 548 KDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSDE 607

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
            + L  +M   GI P+ +T+ +LI  FC    V +A+ LL E+ +       +++ L+I 
Sbjct: 608 ILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLIK 667

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             CK+     A +V +  +S+     + ++S +  +++  G   EA  + + ++E ++
Sbjct: 668 AFCKTSDFSAAQRVFDASLST-CGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRI 724



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 119/437 (27%), Positives = 200/437 (45%), Gaps = 27/437 (6%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ +  T N I+   C  GK  D  K+ D +      PD     +L+           A+
Sbjct: 352 VQPNSYTYNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAAN 411

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M   G  P++ TYN+++  L K G+I  A  LL+ MS  G   D  + N I+  +
Sbjct: 412 RILDEMAQKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGL 471

Query: 233 FDNGKFKQAI----GFWKD-------------------QLRKGCPPYLITYTILIEQVCK 269
             N K   A+    G W +                      K C P  ITY+ L+  +CK
Sbjct: 472 CRNNKLDMAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCK 531

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
           +     A + L +M  +  SPD V Y++ ++  CK GK   AV V+ ++  +G +P++ T
Sbjct: 532 EGRFDEAKKKLLEMIGKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRT 591

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           YN L+     +   D + K++  M      P V TYN LI   C+ G+V++A+   ++M+
Sbjct: 592 YNLLIWGFREKHNSDEILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEML 651

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
                P+I ++  ++ A CK    + A Q +   + S+C    + Y+ +   L+  G   
Sbjct: 652 QNEIVPNITSFELLIKAFCKTSDFSAA-QRVFDASLSTCGQKEVLYSLMCTQLSTYGRWL 710

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +AM +   ++E  IS     ++ +I G C+ D+V+    LLK +  +G     +A+  VI
Sbjct: 711 EAMNILETVLELRISIHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVI 770

Query: 510 HGLC---KSKKVDMAIQ 523
             L    K + VDM  Q
Sbjct: 771 DALSERGKKQHVDMLSQ 787



 Score =  160 bits (404), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 108/429 (25%), Positives = 203/429 (47%), Gaps = 41/429 (9%)

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           R D +E   K L   ++SG  PD  T N+++  LC  G++  A  + D M     E +  
Sbjct: 130 RFDLVESLYKDL---LLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMP----ERNEF 182

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           ++  + R     G+   A+G     L       L+    ++   C++  +  A  +++ M
Sbjct: 183 SFGILARGYCRAGRSMDALGV----LDSMPTMNLVVCNTVVAGFCREGQVDEAERLVERM 238

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL---LSRGM-EPNSITYNTLLHSLGS 339
             EG +P++VT+N+ ++  CK G+  DA  + N++     RG+  P+ +T++ +L     
Sbjct: 239 RDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTFDVMLSGFCE 298

Query: 340 RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVT 399
            G  D    ++DIM        V +YN  ++GL + G+V  A     +M  +  QP+  T
Sbjct: 299 AGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAHEGVQPNSYT 358

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           YN ++  LCKEG   +  ++   +     +P ++TY +L+     +G    A  +  +M 
Sbjct: 359 YNIIVDGLCKEGKAFDVRKVEDFVKSGVMTPDVVTYTSLLHAYCSEGNAAAANRILDEMA 418

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           + G +P+  T+  L+    +A ++ EA  LL+ + ++G  +  ++  ++I GLC++ K+D
Sbjct: 419 QKGCAPNSFTYNVLLQSLWKAGRITEAERLLERMSEKGYSLDTASCNIIIDGLCRNNKLD 478

Query: 520 MAIQVLELM-----------------------ISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           MA+ +++ M                        S R  PD   +ST+V  +  +G  +EA
Sbjct: 479 MAMDIVDGMWNEGSLALGRLGYSFLSLLTDSSSSKRCLPDRITYSTLVSALCKEGRFDEA 538

Query: 557 YKLWQKLIE 565
            K   KL+E
Sbjct: 539 KK---KLLE 544



 Score =  104 bits (260), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 72/269 (26%), Positives = 129/269 (47%), Gaps = 12/269 (4%)

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L+  + ++ ++D    +  +LL  G  P+  T N LL +L + G  +   ++ D M 
Sbjct: 118 YNRLLLAALQEARFDLVESLYKDLLLSGAAPDVFTRNILLQALCAAGRMELARRVFDAMP 177

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E +     F++ IL  G C+ G    A+   + M + N    +V  NTV+   C+EG ++
Sbjct: 178 ERNE----FSFGILARGYCRAGRSMDALGVLDSMPTMN----LVVCNTVVAGFCREGQVD 229

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN---GI-SPDDITH 470
           EA +L+  +     +P ++T+N  I  L K G +  A  ++  M E    G+  PD +T 
Sbjct: 230 EAERLVERMRDEGLAPNVVTFNARISALCKAGRVLDAYRIFNDMQEKWERGLPRPDQVTF 289

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             ++ GFC A  V+EA  L+  +   G   R  +Y   + GL ++  V  A ++L  M  
Sbjct: 290 DVMLSGFCEAGMVDEARVLVDIMRCGGFLRRVESYNRWLSGLVRNGMVGEAQELLREMAH 349

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
              +P+   ++ IV  +  +G   +  K+
Sbjct: 350 EGVQPNSYTYNIIVDGLCKEGKAFDVRKV 378



 Score = 65.5 bits (158), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 51/249 (20%), Positives = 103/249 (41%), Gaps = 1/249 (0%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +  D    +  +  +C  GK + A K++  M ++   P       LI G       +
Sbjct: 547 GKDISPDSVLYDTFIHGYCKHGKTSLAVKVLRDMEKKGCKPSTRTYNLLIWGFREKHNSD 606

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
           +  K++  M   G  P+ +TYN ++   C+RG +  A+ LLDEM  +   P++ ++  ++
Sbjct: 607 EILKLISEMKGKGICPNVMTYNSLIKSFCERGMVNKAMPLLDEMLQNEIVPNITSFELLI 666

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           +       F  A   +   L   C    + Y+++  Q+        A+ +L+ +     S
Sbjct: 667 KAFCKTSDFSAAQRVFDASL-STCGQKEVLYSLMCTQLSTYGRWLEAMNILETVLELRIS 725

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
                Y  ++   CK  + D    ++  L+ +G   +   +  ++ +L  RG    VD +
Sbjct: 726 IHRFPYKQIIEGLCKVDEVDHGHRLLKLLMVKGYSFDPAAFMPVIDALSERGKKQHVDML 785

Query: 350 LDIMNEASH 358
              M E + 
Sbjct: 786 SQKMMEMAE 794


>gi|255661030|gb|ACU25684.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 376

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 191/368 (51%), Gaps = 1/368 (0%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I+ A +V + M  S   PD + YN M+ G  + G+I+  I L + M     + +V+++N 
Sbjct: 6   IDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREXSQ-NVVSFNI 64

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++R +F NG   +AI  W+   + G      TY IL++  CK   I +++ VL+    +G
Sbjct: 65  MMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKG 124

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D   Y++++N  CK+ K D+AV V+N ++  G  PN+  YNTL++       +D   
Sbjct: 125 GVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAI 184

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M   + SPTV TYN LINGLCK      A +   +M+ K  +P ++TY+ ++  L
Sbjct: 185 RVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGL 244

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C+   +  ALQL + +  +   P +   N LI GL   G  + A++LY  M     +P+ 
Sbjct: 245 CQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNL 304

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +TH TL+ GF +   +  A+ +   I + G +    +Y + + GLC   ++  AI  L+ 
Sbjct: 305 VTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQD 364

Query: 528 MISSRYKP 535
            ++ +  P
Sbjct: 365 ALAKKIAP 372



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 102/360 (28%), Positives = 171/360 (47%), Gaps = 7/360 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D    N +L  F   G++ D  +L ++M R        F I ++RGL     ++KA 
Sbjct: 21  VSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREXSQNVVSFNI-MMRGLFGNGDVDKAI 79

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            + ++M  SG V D+ TY ++V G CK G I  ++ +L+     G   D   Y+ ++  +
Sbjct: 80  SIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAYSAMINGL 139

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K  +A+      ++ G  P    Y  LI           AI V  +M    CSP +
Sbjct: 140 CKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTV 199

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTYN+L+N  CK  ++ +A  ++  +L +G +P  ITY+ L+  L  +G    V+  L +
Sbjct: 200 VTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGL-CQG--HKVEMALQL 256

Query: 353 MNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
            N+   +   P V   NILI+GLC  G    A+  +  M   NC P++VT+NT++    K
Sbjct: 257 WNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYK 316

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +G +  AL +   +  +   P +++YN  + GL     +  A++     +   I+P  IT
Sbjct: 317 DGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQDALAKKIAPSIIT 376



 Score =  150 bits (378), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 155/299 (51%), Gaps = 1/299 (0%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   I  A  V  +MA    SPD V YN+++N   + G+  D + +   L+ R    N 
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWE-LMGREXSQNV 59

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +++N ++  L   G  D    I ++M ++       TY IL++G CK G +++++     
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEI 119

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
              K    D   Y+ ++  LCKE  L+EA+ +L+ +  +  +P    YNTLI+G      
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSK 179

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            + A+ ++ +M     SP  +T+ TLI G C+ ++  EA DL+KE+ ++G K     Y L
Sbjct: 180 FDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSL 239

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           ++ GLC+  KV+MA+Q+   +IS+  KPD  + + ++  +   G T+ A  L+  +  W
Sbjct: 240 LMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRW 298



 Score =  145 bits (367), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 160/367 (43%), Gaps = 36/367 (9%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C+ G I  A  +  EM+ S   PD + YN +L   F  G+ K  I  W+   R+      
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGRE------ 54

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                          S ++V++N ++      G  D A+ +   
Sbjct: 55  ------------------------------XSQNVVSFNIMMRGLFGNGDVDKAISIWEL 84

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G   +S TY  L+      G  +   ++L+I  E       F Y+ +INGLCK   
Sbjct: 85  MTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLEIAEEKGGVLDAFAYSAMINGLCKEAK 144

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +D A++  N M+     P+   YNT++         ++A+++   +  ++CSP ++TYNT
Sbjct: 145 LDEAVSVLNGMIKNGGTPNAHVYNTLINGFMGVSKFDDAIRVFREMGSTNCSPTVVTYNT 204

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+GL K     +A  L  +M+E G  P  IT+  L+ G C+  +VE A+ L  ++   G
Sbjct: 205 LINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNG 264

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K       ++IHGLC   K  +A+ +   M      P+    +T+++    DG    A 
Sbjct: 265 LKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 558 KLWQKLI 564
            +W +++
Sbjct: 325 GIWARIL 331



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/321 (26%), Positives = 154/321 (47%), Gaps = 6/321 (1%)

Query: 83  HVLAVNKKLRGL----TITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +V++ N  +RGL     + K      L +  G FVE D  T   ++  FC  G +  + +
Sbjct: 58  NVVSFNIMMRGLFGNGDVDKAISIWELMTQSG-FVE-DSTTYGILVDGFCKNGYINKSLR 115

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           +++I   +  + D      +I GL +  ++++A  VL  M+ +GG P+   YN ++ G  
Sbjct: 116 VLEIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFM 175

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
              +   AI +  EM  + C P V+TYNT++  +    +F +A    K+ L KG  P +I
Sbjct: 176 GVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVI 235

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY++L++ +C+   +  A+++ + +   G  PD+   N L++  C  GK   A+++  ++
Sbjct: 236 TYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDM 295

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
                 PN +T+NTL+      G       I   +      P + +YNI + GLC    +
Sbjct: 296 NRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRI 355

Query: 379 DRAINSFNQMVSKNCQPDIVT 399
             AI      ++K   P I+T
Sbjct: 356 SFAILFLQDALAKKIAPSIIT 376


>gi|356547426|ref|XP_003542113.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g52620-like [Glycine max]
          Length = 825

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 118/464 (25%), Positives = 217/464 (46%)

Query: 101 HDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIR 160
           +D  L + DG     D  T + +++  C+ GK+ +  +LI     +  +P   F   +I 
Sbjct: 189 YDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIID 248

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
           G  +   ++ A++ L  + M G +P   TY  ++ G CK G+  +   LL EM+  G   
Sbjct: 249 GYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNM 308

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           +V  +N ++   +  G   +A    +     GC P + TY I+I   CK   I  A E+L
Sbjct: 309 NVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELL 368

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           +     G  P+  +Y  L++  CK+G Y  A  ++  +   G + + ++Y   +H +   
Sbjct: 369 EKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVA 428

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G  D    + + M E    P    YNIL++GLCK G +       ++M+ +N QPD+  +
Sbjct: 429 GEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVF 488

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
            T++    + G L+EA+++  ++      P ++ YN +I G  K G M  A+    +M  
Sbjct: 489 ATLIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNS 548

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
              +PD+ T+ T+I G+ +   +  A+ +  ++ K   K     Y  +I+G CK   +  
Sbjct: 549 VHHAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIR 608

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           A +V   M S    P+   ++T+V      G  E A  +++ ++
Sbjct: 609 AEKVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELML 652



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 111/461 (24%), Positives = 212/461 (45%), Gaps = 18/461 (3%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           K  N ++      G +T+A++++  MA     PD      +I    +  RIE+A ++L+ 
Sbjct: 311 KVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEK 370

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
               G +P+  +Y  ++   CK+G    A  +L  ++  G + D+++Y   +  +   G+
Sbjct: 371 AKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGE 430

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A+   +  + KG  P    Y IL+  +CK+  I     +L +M      PD+  + +
Sbjct: 431 IDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFAT 490

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L++   + G+ D+A+ +   ++ +G++P  + YN ++      G        L+ MN   
Sbjct: 491 LIDGFIRNGELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVH 550

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
           H+P  +TY+ +I+G  K   +  A+  F QM+    +P+++TY +++   CK+  +  A 
Sbjct: 551 HAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAE 610

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++   +      P ++TY TL+ G  K G  E+A  ++  M+ NG  P+D T   LI G 
Sbjct: 611 KVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGL 670

Query: 478 CRADQ----VEEA----------VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
                    +EE           +D    +   G     +AY  VI  LCK   VD A  
Sbjct: 671 TNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQL 730

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +L  M++  +  D   F+ ++  +   G ++E    W+ +I
Sbjct: 731 LLTKMLTKGFLIDSVCFTALLHGLCHKGKSKE----WRNII 767



 Score =  159 bits (401), Expect = 5e-36,   Method: Compositional matrix adjust.
 Identities = 115/446 (25%), Positives = 201/446 (45%), Gaps = 5/446 (1%)

Query: 127 FCSRGKLTDASKLID-IMARRNQIPDFHFCINLIRGLIRIDRIEKA----SKVLQIMVMS 181
           +   G L  A +L   +    N  P F     L+ GL++  +++ A     K+LQ    +
Sbjct: 140 YAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGT 199

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G V D  T ++MV GLC  G+I     L+       C P V+ YN I+      G  + A
Sbjct: 200 GAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCA 259

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
                +   KG  P + TY  LI   CK        ++L +MA  G + ++  +N++++ 
Sbjct: 260 TRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDA 319

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             K G   +A  ++  +   G  P+  TYN +++     G  +  D++L+   E    P 
Sbjct: 320 EYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPN 379

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            F+Y  L++  CK G   +A     ++     + D+V+Y   +  +   G ++ AL +  
Sbjct: 380 KFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVRE 439

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +      P    YN L+ GL KKG +    +L  +M++  + PD     TLI GF R  
Sbjct: 440 KMMEKGVFPDAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNG 499

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +++EA+ + K I ++G       Y  +I G CK  K+  A+  L  M S  + PD+  +S
Sbjct: 500 ELDEAIKIFKVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYS 559

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWK 567
           T++           A K++ ++++ K
Sbjct: 560 TVIDGYVKQHDMSSALKMFGQMMKHK 585



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 137/568 (24%), Positives = 235/568 (41%), Gaps = 106/568 (18%)

Query: 30  QHGVVNNHRTQFYSQLRDLGAGRNVS-------LKCRGLPGNVCIDRVNEVDQDEWSSES 82
           ++G+V     +   ++ ++G G +++         C+G        R+ E D+       
Sbjct: 322 KYGLVTE-AAEMLRRMAEMGCGPDITTYNIMINFSCKG-------GRIEEADE------- 366

Query: 83  HVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDI 142
             L    K RGL   K S+ P                   ++  +C +G    AS ++  
Sbjct: 367 --LLEKAKERGLLPNKFSYTP-------------------LMHAYCKKGDYVKASGMLFR 405

Query: 143 MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ 202
           +A   +  D       I G++    I+ A  V + M+  G  PD   YN+++ GLCK+G+
Sbjct: 406 IAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKGR 465

Query: 203 IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTI 262
           I +   LL EM     +PDV  + T++     NG+  +AI  +K  +RK           
Sbjct: 466 IPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIFKVIIRK----------- 514

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
                                   G  P IV YN+++   CK GK  DA+  +N + S  
Sbjct: 515 ------------------------GVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVH 550

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             P+  TY+T++     +    +  K+   M +    P V TY  LING CK   + RA 
Sbjct: 551 HAPDEYTYSTVIDGYVKQHDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAE 610

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             F+ M S +  P++VTY T++G   K G    A  +  L+  + C P   T++ LI+GL
Sbjct: 611 KVFSGMKSFDLVPNVVTYTTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGL 670

Query: 443 AKKGCM------------EKAMVL--YGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
                             E++++L  +  M+ +G       + ++I   C+   V+ A  
Sbjct: 671 TNTATSPVLIEEKDSKENERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQL 730

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLC---KSKK----VDMAIQVLELMISSRYKPDDTVFS 541
           LL ++  +G  + +  +  ++HGLC   KSK+    +   +  +EL  + +Y       S
Sbjct: 731 LLTKMLTKGFLIDSVCFTALLHGLCHKGKSKEWRNIISCDLNKIELQTAVKY-------S 783

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVF 569
             + K    G   EA  + Q L+E   F
Sbjct: 784 LTLDKYLYQGRLSEASVILQTLVEDSKF 811



 Score =  139 bits (350), Expect = 5e-30,   Method: Compositional matrix adjust.
 Identities = 100/368 (27%), Positives = 169/368 (45%), Gaps = 16/368 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D +  N ++   C +G++     L+  M  RN  PD +    LI G IR   +++A K+ 
Sbjct: 449 DAQIYNILMSGLCKKGRIPAMKLLLSEMLDRNVQPDVYVFATLIDGFIRNGELDEAIKIF 508

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           ++++  G  P  + YN M+ G CK G++  A++ L+EM+     PD  TY+T++      
Sbjct: 509 KVIIRKGVDPGIVGYNAMIKGFCKFGKMTDALSCLNEMNSVHHAPDEYTYSTVIDGYVKQ 568

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A+  +   ++    P +ITYT LI   CK+  + RA +V   M      P++VTY
Sbjct: 569 HDMSSALKMFGQMMKHKFKPNVITYTSLINGFCKKADMIRAEKVFSGMKSFDLVPNVVTY 628

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM-N 354
            +LV    K GK + A  +   +L  G  PN  T++ L++ L +      + +  D   N
Sbjct: 629 TTLVGGFFKAGKPERATSIFELMLMNGCLPNDATFHYLINGLTNTATSPVLIEEKDSKEN 688

Query: 355 EASHSPTVFT-------------YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
           E S     FT             YN +I  LCK+G VD A     +M++K    D V + 
Sbjct: 689 ERSLILDFFTMMLLDGWDQVIAAYNSVIVCLCKHGTVDTAQLLLTKMLTKGFLIDSVCFT 748

Query: 402 TVLGALCKEGMLNEALQLLHL-LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
            +L  LC +G   E   ++   LN        + Y+  +D    +G + +A V+   ++E
Sbjct: 749 ALLHGLCHKGKSKEWRNIISCDLNKIELQTA-VKYSLTLDKYLYQGRLSEASVILQTLVE 807

Query: 461 NGISPDDI 468
           +    D +
Sbjct: 808 DSKFSDQV 815



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 88/397 (22%), Positives = 174/397 (43%), Gaps = 10/397 (2%)

Query: 165 IDRIEKASKVLQIMVMSGGVP-----DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE 219
           IDR+  A   L+    +   P     D + ++ ++  L           +L+ M     +
Sbjct: 68  IDRVHDAELGLKFFDWASTRPFSCSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLK 127

Query: 220 PDVITYNTILRTMFDNGKFKQAIG-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
           P    ++ ++    ++G   +A+  F   +    C P  +   +L+  + K   +  A++
Sbjct: 128 PTREAFSALILAYAESGSLDRALQLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQ 187

Query: 279 VLDDMAIE----GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
           + D M       G   D  T + +V   C  GK ++   +I +   +   P+ + YN ++
Sbjct: 188 LYDKMLQTDDGTGAVVDNYTTSIMVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMII 247

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                +G      + L+ +      PTV TY  LING CK G  +       +M ++   
Sbjct: 248 DGYCKKGDLQCATRALNELKMKGVLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLN 307

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            ++  +N V+ A  K G++ EA ++L  +    C P + TYN +I+   K G +E+A  L
Sbjct: 308 MNVKVFNNVIDAEYKYGLVTEAAEMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADEL 367

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             +  E G+ P+  ++  L+  +C+     +A  +L  I + G K    +Y   IHG+  
Sbjct: 368 LEKAKERGLLPNKFSYTPLMHAYCKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVV 427

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           + ++D+A+ V E M+     PD  +++ ++  +   G
Sbjct: 428 AGEIDVALMVREKMMEKGVFPDAQIYNILMSGLCKKG 464



 Score =  101 bits (252), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 82/357 (22%), Positives = 157/357 (43%), Gaps = 5/357 (1%)

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
           C  D + ++++L+ +     F +     ++   +   P    ++ LI    +   + RA+
Sbjct: 91  CSLDGVAHSSLLKLLASYRVFPEIELVLENMKAQHLKPTREAFSALILAYAESGSLDRAL 150

Query: 278 EVLDDM-AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR----GMEPNSITYNT 332
           ++   +  +  C P  V  N L+N   K GK D A+ + + +L      G   ++ T + 
Sbjct: 151 QLFHTVREMHNCFPTFVASNLLLNGLVKSGKVDVALQLYDKMLQTDDGTGAVVDNYTTSI 210

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           ++  L + G  +   +++         P V  YN++I+G CK G +  A  + N++  K 
Sbjct: 211 MVKGLCNLGKIEEGRRLIKHRWGKCCVPHVVFYNMIIDGYCKKGDLQCATRALNELKMKG 270

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             P + TY  ++   CK G      QLL  +     +  +  +N +ID   K G + +A 
Sbjct: 271 VLPTVETYGALINGFCKAGEFEAVDQLLTEMAARGLNMNVKVFNNVIDAEYKYGLVTEAA 330

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            +  +M E G  PD  T+  +I   C+  ++EEA +LL++  +RG      +Y  ++H  
Sbjct: 331 EMLRRMAEMGCGPDITTYNIMINFSCKGGRIEEADELLEKAKERGLLPNKFSYTPLMHAY 390

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           CK      A  +L  +     K D   +   +  V   G  + A  + +K++E  VF
Sbjct: 391 CKKGDYVKASGMLFRIAEIGEKSDLVSYGAFIHGVVVAGEIDVALMVREKMMEKGVF 447


>gi|115468576|ref|NP_001057887.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|113595927|dbj|BAF19801.1| Os06g0565000 [Oryza sativa Japonica Group]
 gi|125597608|gb|EAZ37388.1| hypothetical protein OsJ_21726 [Oryza sativa Japonica Group]
          Length = 687

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 111/421 (26%), Positives = 216/421 (51%), Gaps = 4/421 (0%)

Query: 148 QIPD---FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIR 204
           Q+P    F F I +I  L +   + +A  +   M   G +PD +T+N ++ G  K G++ 
Sbjct: 182 QLPAPNVFTFNI-VIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELD 240

Query: 205 SAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
               L++EM  SGC+ DV+TYN ++      G+ + A G++    R+G    ++T++  +
Sbjct: 241 EVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFV 300

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           +  CK+  +  A+++   M + G + +  TY  L++ +CK G+ DDA+++++ ++ +G+ 
Sbjct: 301 DAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVP 360

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            N +TY  L+  L         + +L +M +A        Y  LI+G       ++A+  
Sbjct: 361 LNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLYTTLIHGHFMNKNSEKALGL 420

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            ++M +K  + DI  Y  ++  LC    L+EA  LL  ++ S   P  I Y T++D   K
Sbjct: 421 LSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFK 480

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G + +A+ +  +++++G  P+ IT+  LI G C+A  ++EA+    ++   G      A
Sbjct: 481 SGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQA 540

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  ++ GLCK+  ++ A+Q+   M+      D  V++ ++      G   +A+ L  K+I
Sbjct: 541 YTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMI 600

Query: 565 E 565
           +
Sbjct: 601 D 601



 Score =  184 bits (468), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 113/448 (25%), Positives = 211/448 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +   G+L +  +L++ M R     D      LI    +  R+E A    
Sbjct: 222 DVVTFNSLIDGYGKCGELDEVEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYF 281

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G + + +T++  V   CK G +R A+ L  +M V G   +  TY  ++      
Sbjct: 282 AAMKREGVMANVVTFSTFVDAFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKA 341

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G+   AI    + +R+G P  ++TYT+L++ +CK+  +A A +VL  M   G   + + Y
Sbjct: 342 GRLDDAIVLLDEMVRQGVPLNVVTYTVLVDGLCKERKVAEAEDVLRMMEKAGVRANELLY 401

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++        + A+ +++ + ++G+E +   Y  L+  L +    D    +L  M+E
Sbjct: 402 TTLIHGHFMNKNSEKALGLLSEMKNKGLELDISLYGALIQGLCNVHKLDEAKSLLTKMDE 461

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P    Y  +++   K G V  AI    +++    QP+++TY  ++  LCK G ++E
Sbjct: 462 SGLEPNYIIYTTMMDACFKSGKVPEAIAMLQKILDSGFQPNVITYCALIDGLCKAGSIDE 521

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+   + +      P +  Y  L+DGL K GC+ +A+ L+ +M+  G+S D + +  L+ 
Sbjct: 522 AISHFNKMRDLGLDPNVQAYTALVDGLCKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLD 581

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+ +   + +A  L  ++   G ++    Y   I G C    +  A +V   MI     P
Sbjct: 582 GYLKQGNLHDAFALKAKMIDSGLQLDLFCYTCFISGFCNLNMMPEAREVFSEMIGHGIAP 641

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           D  V++ ++ K    G  EEA  L  ++
Sbjct: 642 DRAVYNCLISKYQKLGNLEEAISLQDEM 669



 Score =  126 bits (316), Expect = 3e-26,   Method: Compositional matrix adjust.
 Identities = 80/273 (29%), Positives = 140/273 (51%), Gaps = 13/273 (4%)

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           ++L++    +G  DDAV  +  +    + PN+ T N +L  L      D   +++  + E
Sbjct: 126 DTLLSVLADRGLLDDAVRAVARVRELRVPPNTRTCNHILLRLAR----DRSGRLVRRLFE 181

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P VFT+NI+I+ LCK G +  A + F++M    C PD+VT+N+++    K G L+E
Sbjct: 182 QLPAPNVFTFNIVIDFLCKEGELAEARSLFSRMKEMGCLPDVVTFNSLIDGYGKCGELDE 241

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
             QL+  +  S C   ++TYN LI+   K G ME A   +  M   G+  + +T  T + 
Sbjct: 242 VEQLVEEMRRSGCKADVVTYNALINCFCKFGRMETAYGYFAAMKREGVMANVVTFSTFVD 301

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            FC+   V EA+ L  ++  RG  +    Y  +I G CK+ ++D AI +L+ M+      
Sbjct: 302 AFCKEGLVREAMKLFAQMRVRGMALNEFTYTCLIDGTCKAGRLDDAIVLLDEMVRQGVPL 361

Query: 536 DDTVFSTIV------KKVADDGMTEEAYKLWQK 562
           +   ++ +V      +KVA+    E+  ++ +K
Sbjct: 362 NVVTYTVLVDGLCKERKVAE---AEDVLRMMEK 391



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 60/249 (24%), Positives = 110/249 (44%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      ++Q  C+  KL +A  L+  M      P++     ++    +  ++ +A 
Sbjct: 429 LELDISLYGALIQGLCNVHKLDEAKSLLTKMDESGLEPNYIIYTTMMDACFKSGKVPEAI 488

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +LQ ++ SG  P+ ITY  ++ GLCK G I  AI+  ++M   G +P+V  Y  ++  +
Sbjct: 489 AMLQKILDSGFQPNVITYCALIDGLCKAGSIDEAISHFNKMRDLGLDPNVQAYTALVDGL 548

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG   +A+  + + + KG     + YT L++   KQ  +  A  +   M   G   D+
Sbjct: 549 CKNGCLNEAVQLFNEMVHKGMSLDKVVYTALLDGYLKQGNLHDAFALKAKMIDSGLQLDL 608

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             Y   ++  C      +A  V + ++  G+ P+   YN L+      G  +    + D 
Sbjct: 609 FCYTCFISGFCNLNMMPEAREVFSEMIGHGIAPDRAVYNCLISKYQKLGNLEEAISLQDE 668

Query: 353 MNEASHSPT 361
           M     S T
Sbjct: 669 MERVLPSCT 677


>gi|356510925|ref|XP_003524184.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  191 bits (485), Expect = 9e-46,   Method: Compositional matrix adjust.
 Identities = 122/444 (27%), Positives = 216/444 (48%), Gaps = 4/444 (0%)

Query: 124 LQNFCSRGKLTDASKLIDI---MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           ++N C  GKL +  + +D+   MAR   +P       L+  ++R+     A  +++ M  
Sbjct: 45  MRNLCWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFS 104

Query: 181 SGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           S G+  DTIT N+++  LC+   +    ++L  M   G EP V+T  T++  +   G   
Sbjct: 105 SLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVA 164

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           QA+G      +   P  + TY +LI  +CK      A+  L  M      P++V Y++++
Sbjct: 165 QAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIM 224

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK G   +A+ + + +  +G+ PN +TY  L+  L + G W     +LD M +    
Sbjct: 225 DGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMR 284

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P +   NIL++  CK G V +A +    M+     PD+ TYN+++   C +  +NEA+++
Sbjct: 285 PDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            HL+      P ++ + +LI G  K   + KAM L  +M + G  PD  T  TLI GFC+
Sbjct: 345 FHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQ 404

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A +   A +L   + K G         +++ GLCK   +  A+ + + M  S    +  +
Sbjct: 405 AGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVI 464

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           +S ++  +   G    A++L+  L
Sbjct: 465 YSILLDGMCSAGKLNAAWELFSSL 488



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 117/445 (26%), Positives = 217/445 (48%), Gaps = 1/445 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C +G +  A  L D M +     D +    LI GL +      A   L+ M
Sbjct: 149 TLTTLINGLCVQGNVAQAVGLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKM 208

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+ + Y+ ++ GLCK G +  A+ L  EM+  G  P+++TY  +++ + + G++
Sbjct: 209 EERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRW 268

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+A     + ++ G  P L    IL++  CK+  + +A  V+  M + G  PD+ TYNSL
Sbjct: 269 KEAGSLLDEMMKMGMRPDLQMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSL 328

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C Q K ++A+ V + ++SRG  P+ + + +L+H        +    +L+ M++   
Sbjct: 329 IHIYCLQNKMNEAMRVFHLMVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGF 388

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V T+  LI G C+ G    A   F  M      P++ T   +L  LCKE +L+EA+ 
Sbjct: 389 VPDVATWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVS 448

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +  S+    ++ Y+ L+DG+   G +  A  L+  +   G+  +   +  +I G C
Sbjct: 449 LAKAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLC 508

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +   +++A DLL  + + G    N  Y + + GL   K++  +I+ L +M    +  D  
Sbjct: 509 KQGSLDKAEDLLINMEENGCLPNNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVDAA 568

Query: 539 VFSTIVKKVA-DDGMTEEAYKLWQK 562
               I+  ++ ++G T+    L++K
Sbjct: 569 TTEFIINYLSTNEGDTKIREFLFRK 593



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 202/433 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T N ++   C    +     ++  M +    P       LI GL     + +A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAV 167

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M       D  TY +++ GLCK G   +A+  L +M     +P+V+ Y+TI+  +
Sbjct: 168 GLADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G   +A+    +   KG  P L+TY  LI+ +C       A  +LD+M   G  PD+
Sbjct: 228 CKDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDL 287

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
              N LV+  CK+GK   A  VI  ++  G  P+  TYN+L+H    +   +   ++  +
Sbjct: 288 QMLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHL 347

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P +  +  LI+G CK   +++A++   +M      PD+ T+ T++G  C+ G 
Sbjct: 348 MVSRGRLPDIVVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGR 407

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
              A +L   ++     P L T   ++DGL K+  + +A+ L   M ++ +  + + +  
Sbjct: 408 PLAAKELFLNMHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSI 467

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C A ++  A +L   +  +G ++    Y ++I GLCK   +D A  +L  M  + 
Sbjct: 468 LLDGMCSAGKLNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENG 527

Query: 533 YKPDDTVFSTIVK 545
             P++  ++  V+
Sbjct: 528 CLPNNCTYNVFVQ 540



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 109/400 (27%), Positives = 180/400 (45%), Gaps = 6/400 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G    A   +  M  RN  P+      ++ GL +   + +A  + 
Sbjct: 181 DVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLC 240

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ +TY  ++ GLC  G+ + A +LLDEM   G  PD+   N ++      
Sbjct: 241 SEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMKMGMRPDLQMLNILVDAFCKE 300

Query: 236 GKFKQA---IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           GK  QA   IGF    +  G  P + TY  LI   C Q  +  A+ V   M   G  PDI
Sbjct: 301 GKVMQAKSVIGF---MILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGRLPDI 357

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V + SL++  CK    + A+ ++  +   G  P+  T+ TL+      G   A  ++   
Sbjct: 358 VVFTSLIHGWCKDKNINKAMHLLEEMSKMGFVPDVATWTTLIGGFCQAGRPLAAKELFLN 417

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M++    P + T  ++++GLCK  L+  A++    M   N   +IV Y+ +L  +C  G 
Sbjct: 418 MHKYGQVPNLQTCAVILDGLCKENLLSEAVSLAKAMEKSNLDLNIVIYSILLDGMCSAGK 477

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           LN A +L   L G      +  Y  +I GL K+G ++KA  L   M ENG  P++ T+  
Sbjct: 478 LNAAWELFSSLPGKGLQINVYIYTIMIKGLCKQGSLDKAEDLLINMEENGCLPNNCTYNV 537

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            + G     ++  ++  L  +  +G  +  +    +I+ L
Sbjct: 538 FVQGLLTKKEIARSIKYLTIMRDKGFSVDAATTEFIINYL 577



 Score = 73.2 bits (178), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 55/232 (23%), Positives = 105/232 (45%), Gaps = 8/232 (3%)

Query: 342 CWDA----VDKILDI---MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NC 393
           CW      +D+ LD+   M      P+V  + +L+  + +      AI+    M S    
Sbjct: 49  CWSGKLKNIDEALDLFQGMARMKPLPSVKDFTLLLGAIVRLKHYTTAISLVKHMFSSLGI 108

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
           + D +T N V+  LC+  ++     +L  +      P ++T  TLI+GL  +G + +A+ 
Sbjct: 109 EADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTTLINGLCVQGNVAQAVG 168

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L   M +     D  T+  LI G C+      AV  L+++ +R  K     Y  ++ GLC
Sbjct: 169 LADHMEKMWYPLDVYTYGVLINGLCKTGDTLAAVGWLRKMEERNWKPNVVVYSTIMDGLC 228

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           K   V  A+ +   M     +P+   ++ +++ + + G  +EA  L  ++++
Sbjct: 229 KDGLVSEALNLCSEMNGKGVRPNLVTYACLIQGLCNFGRWKEAGSLLDEMMK 280


>gi|414887654|tpg|DAA63668.1| TPA: hypothetical protein ZEAMMB73_339081 [Zea mays]
          Length = 1098

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 129/471 (27%), Positives = 220/471 (46%), Gaps = 26/471 (5%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G++ +A  ++  M      PD +   +L+ G  +   + KA +    M+ 
Sbjct: 388 NIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLR 447

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G    T+TYN ++ G C  G I  A+ L   M   G  P+ I+ +T+L   F +GK ++
Sbjct: 448 NGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEK 507

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  WK+ L +G      T+  +I  +CK   +  A E++D M    C PDI+TY +L +
Sbjct: 508 ALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFS 567

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G  D A  ++N L + G  P    +N+L+           V+ IL  M+    SP
Sbjct: 568 GYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSP 627

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
               Y  LI G CK G +  A N + +M+ K   P++   ++++    ++G  +EA  +L
Sbjct: 628 NTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVL 687

Query: 421 HLLNGSSCSPCL--------------------------ITYNTLIDGLAKKGCMEKAMVL 454
             L G+   P +                          I +N +I GL K G +E A  L
Sbjct: 688 QNLVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNL 747

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
              + + G   D+ T+ +LI G   +  V+ A DL   +   G       Y  +I+GLCK
Sbjct: 748 LADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCK 807

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           S ++  A+ + + + +    P+   ++T++ K   DG   EA+KL Q++IE
Sbjct: 808 SGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIE 858



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 122/455 (26%), Positives = 217/455 (47%), Gaps = 30/455 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+ FCS G + DA +L  +M ++   P+   C  L+ G  +  + EKA  + +  
Sbjct: 456 TYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKET 515

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G   +T T+N ++ GLCK  ++  A  L+D+M    C PD+ITY T+       G  
Sbjct: 516 LARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDM 575

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILI--EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
            +A     +    G  P +  +  LI    + KQ G  +  ++L +M+  G SP+ V Y 
Sbjct: 576 DRASRILNELENLGFAPTIEFFNSLITGHFIAKQHG--KVNDILFEMSNRGLSPNTVAYG 633

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL------ 350
           +L+   CK+G    A  +   ++ +G+ PN    ++L+     +G +D  + +L      
Sbjct: 634 ALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGT 693

Query: 351 --------------------DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
                               D +   +H      +NI+I GLCK G ++ A N    +  
Sbjct: 694 DMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKD 753

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
           K    D  TY++++      G ++ A  L   +     +P ++TYN+LI GL K G + +
Sbjct: 754 KGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSR 813

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A+ L+ ++   GISP+ IT+ TLI   C+   + EA  L + + + G       Y ++I+
Sbjct: 814 AVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILIN 873

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           GLC    ++ AI++L+ MI +   P+   + T+++
Sbjct: 874 GLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 100/380 (26%), Positives = 187/380 (49%), Gaps = 1/380 (0%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           ++++++  L   GQ+  A+ + DEM   GC   + + N+IL  +   G     +  ++  
Sbjct: 175 SFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQM 234

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
            R G  P   T  I+ +  CK  G+  A+E +++M   G   ++V Y++++N  C+ G+ 
Sbjct: 235 QRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQT 294

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           +DA  ++++L  RG  PN +TY  L+      +   +A   + +I            +  
Sbjct: 295 NDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGA 354

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +ING C+ G ++ A    N+MV    Q ++  YN ++   CK G + EA  +LH + G  
Sbjct: 355 VINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVG 414

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P   +YN+L+DG  KKG M KA   Y  M+ NG +   +T+  L+ GFC    +++A+
Sbjct: 415 VRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDAL 474

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L   + K+G      +   ++ G  KS K + A+ + +  ++     + T F+T++  +
Sbjct: 475 RLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGL 534

Query: 548 ADDGMTEEAYKLWQKLIEWK 567
                  EA +L  K+ +W+
Sbjct: 535 CKIERMPEAEELVDKMKQWR 554



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 102/369 (27%), Positives = 185/369 (50%), Gaps = 9/369 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   +   +C  G +  AS++++ +      P   F  +LI G     +  K + +L
Sbjct: 558 DIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDIL 617

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+T+ Y  ++ G CK G + +A  L  EM   G  P++   ++++   +  
Sbjct: 618 FEMSNRGLSPNTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRK 677

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GKF +A    ++         L+   ++ +    +  I +    +D +A        + +
Sbjct: 678 GKFDEANLVLQN---------LVGTDMIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMW 728

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N ++   CK G+ +DA  ++ +L  +G   ++ TY++L+H   + G  D    + D M  
Sbjct: 729 NIVIFGLCKLGRIEDAKNLLADLKDKGFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLS 788

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P + TYN LI GLCK G + RA++ F ++ +K   P+ +TYNT++   CK+G + E
Sbjct: 789 VGLTPNIVTYNSLIYGLCKSGELSRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITE 848

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   +      P + TY+ LI+GL  +G ME+A+ L  QM+EN + P+ +T+ TLI 
Sbjct: 849 AFKLKQRMIEEGIHPTVFTYSILINGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQ 908

Query: 476 GFCRADQVE 484
           G+ R + V+
Sbjct: 909 GYVRCESVD 917



 Score =  167 bits (423), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 101/423 (23%), Positives = 206/423 (48%), Gaps = 1/423 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L+   + G+L  A ++ D M           C +++  L +   +     V + M  +G
Sbjct: 179 LLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVFEQMQRAG 238

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD  T  +M    CK   +  A+  ++EM+  G E +++ Y+ ++    + G+   A 
Sbjct: 239 ALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEVGQTNDAR 298

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-EGCSPDIVTYNSLVNF 301
                   +G  P ++TYT+L++  C +  +  A  V+ ++   +    D   + +++N 
Sbjct: 299 RMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAVFGAVING 358

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+ G+ +DA  ++N ++   ++ N   YN +++     G       IL  M      P 
Sbjct: 359 YCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEMTGVGVRPD 418

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++YN L++G CK GL+++A  ++N M+        +TYN +L   C  G +++AL+L  
Sbjct: 419 TYSYNSLVDGYCKKGLMNKAFETYNTMLRNGFAATTLTYNALLKGFCSLGSIDDALRLWF 478

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
           L+     +P  I+ +TL+DG  K G  EKA+ L+ + +  G++ +  T  T+I G C+ +
Sbjct: 479 LMLKKGIAPNEISCSTLLDGFFKSGKTEKALNLWKETLARGLAKNTTTFNTVINGLCKIE 538

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++ EA +L+ ++ +         YR +  G CK   +D A ++L  + +  + P    F+
Sbjct: 539 RMPEAEELVDKMKQWRCPPDIITYRTLFSGYCKIGDMDRASRILNELENLGFAPTIEFFN 598

Query: 542 TIV 544
           +++
Sbjct: 599 SLI 601



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 119/484 (24%), Positives = 208/484 (42%), Gaps = 38/484 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N IL      G L     + + M R   +PD      + +   ++  +  A + ++ 
Sbjct: 209 RSCNSILNRLAQTGDLGATVAVFEQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEE 268

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G   + + Y+ ++ G C+ GQ   A  +LD +   G  P+++TY  +++   +   
Sbjct: 269 MTKMGVEVNLVAYHAVMNGYCEVGQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKN 328

Query: 238 FKQAIGFWKDQLRKG-------------------------------------CPPYLITY 260
            ++A G  + ++RK                                          L  Y
Sbjct: 329 MEEAEGVVQ-EIRKNKQLVVDEAVFGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVY 387

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
            I+I   CK   +  A  +L +M   G  PD  +YNSLV+  CK+G  + A    N +L 
Sbjct: 388 NIMINGYCKLGRMVEAHNILHEMTGVGVRPDTYSYNSLVDGYCKKGLMNKAFETYNTMLR 447

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G    ++TYN LL    S G  D   ++  +M +   +P   + + L++G  K G  ++
Sbjct: 448 NGFAATTLTYNALLKGFCSLGSIDDALRLWFLMLKKGIAPNEISCSTLLDGFFKSGKTEK 507

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+N + + +++    +  T+NTV+  LCK   + EA +L+  +    C P +ITY TL  
Sbjct: 508 ALNLWKETLARGLAKNTTTFNTVINGLCKIERMPEAEELVDKMKQWRCPPDIITYRTLFS 567

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G  K G M++A  +  ++   G +P      +LI G   A Q  +  D+L E+  RG   
Sbjct: 568 GYCKIGDMDRASRILNELENLGFAPTIEFFNSLITGHFIAKQHGKVNDILFEMSNRGLSP 627

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
              AY  +I G CK   +  A  +   MI     P+  + S++V      G  +EA  + 
Sbjct: 628 NTVAYGALIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVL 687

Query: 561 QKLI 564
           Q L+
Sbjct: 688 QNLV 691



 Score =  120 bits (301), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/291 (26%), Positives = 134/291 (46%), Gaps = 26/291 (8%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C  G L  A  L   M  +  +P+   C +L+    R  + ++A+ VLQ +V + 
Sbjct: 635 LIAGWCKEGDLHTAYNLYLEMIEKGLVPNLFICSSLVSCFYRKGKFDEANLVLQNLVGTD 694

Query: 183 GVPDT--------------------------ITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
            +PD                           I +N+++ GLCK G+I  A  LL ++   
Sbjct: 695 MIPDISAPRLEIGKVANFIDTVAGGNHHSAKIMWNIVIFGLCKLGRIEDAKNLLADLKDK 754

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G   D  TY++++     +G    A       L  G  P ++TY  LI  +CK   ++RA
Sbjct: 755 GFVADNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGELSRA 814

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + +   +  +G SP+ +TYN+L++  CK G   +A  +   ++  G+ P   TY+ L++ 
Sbjct: 815 VSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSILING 874

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           L ++G  +   K+LD M E +  P   TY  LI G  +   VD  I   +Q
Sbjct: 875 LCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQ 925



 Score = 80.1 bits (196), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 54/239 (22%), Positives = 114/239 (47%), Gaps = 1/239 (0%)

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           ++ +++ LL +L + G  D   ++ D M       ++ + N ++N L + G +   +  F
Sbjct: 172 SAASFDLLLRALANAGQLDGALQVFDEMRTLGCRLSMRSCNSILNRLAQTGDLGATVAVF 231

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            QM      PD  T   +  A CK   +  AL+ +  +        L+ Y+ +++G  + 
Sbjct: 232 EQMQRAGALPDKFTVAIMAKAYCKVKGVVHALEFVEEMTKMGVEVNLVAYHAVMNGYCEV 291

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA- 504
           G    A  +   +   G SP+ +T+  L+ G+C    +EEA  +++EI K    + + A 
Sbjct: 292 GQTNDARRMLDSLPGRGFSPNIVTYTLLVKGYCNEKNMEEAEGVVQEIRKNKQLVVDEAV 351

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +  VI+G C+  +++ A ++L  M+ SR + +  V++ ++      G   EA+ +  ++
Sbjct: 352 FGAVINGYCQMGRMEDAARLLNEMVDSRLQVNLFVYNIMINGYCKLGRMVEAHNILHEM 410



 Score = 60.8 bits (146), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/177 (25%), Positives = 73/177 (41%), Gaps = 1/177 (0%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           D  FV  D  T + ++    + G +  A  L D M      P+     +LI GL +   +
Sbjct: 753 DKGFVA-DNFTYSSLIHGCSASGFVDVAFDLRDTMLSVGLTPNIVTYNSLIYGLCKSGEL 811

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A  + + +   G  P+ ITYN ++   CK G I  A  L   M   G  P V TY+ +
Sbjct: 812 SRAVSLFKKLWTKGISPNAITYNTLIDKHCKDGYITEAFKLKQRMIEEGIHPTVFTYSIL 871

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           +  +   G  ++AI      +     P  +TY  LI+   +   +   I  LD   I
Sbjct: 872 INGLCTQGYMEEAIKLLDQMIENNVDPNYVTYWTLIQGYVRCESVDVPIMPLDQSTI 928


>gi|326491875|dbj|BAJ98162.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 628

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 214/424 (50%), Gaps = 3/424 (0%)

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG-VPDTITYNMMVGGLCKR 200
           I AR+ Q P  H   ++I  L+     EK  ++   M   G   PDT+TY+ ++   CK 
Sbjct: 181 IKARKCQ-PTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSALISAFCKL 239

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G+  SAI LL+EM  +G +P    Y  ++  +F       A+G +++   + C P + TY
Sbjct: 240 GRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQYCRPDVFTY 299

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           T LI  + K   +  A     +M  EGC PD V  N+++NF  K G+ DDA+ +   + +
Sbjct: 300 TELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKLFEEMET 359

Query: 321 RGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
               P+ +TYNT++ +L  S+     +    + M  +  SP+ FTY+ILI+G CK    +
Sbjct: 360 LRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTE 419

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +A+    +M  K   P    Y +++ AL K    + A +L   L  +  S     Y  +I
Sbjct: 420 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSARVYAVMI 479

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
             L K G ++ A+ L+ +M   G +P+   +  L+ G  RA  ++EA+  ++ +   G  
Sbjct: 480 KHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQDHGCI 539

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
              ++Y ++++ L K+   D A+ +L  M  S  KPD   ++T++  ++  GM EEA KL
Sbjct: 540 PDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMFEEAAKL 599

Query: 560 WQKL 563
            +++
Sbjct: 600 MKEM 603



 Score =  183 bits (464), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 106/334 (31%), Positives = 171/334 (51%), Gaps = 1/334 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD      LIRGL +  R+++A      M   G  PDT+  N M+  L K G++  AI L
Sbjct: 294 PDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAIKL 353

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGCPPYLITYTILIEQVC 268
            +EM    C P V+TYNTI++ +F++      I  W ++++  G  P   TY+ILI+  C
Sbjct: 354 FEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDGFC 413

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K     +A+ +L++M  +G  P    Y SL++   K  +YD A  +   L       ++ 
Sbjct: 414 KTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSSAR 473

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            Y  ++  LG  G  D    + D MN    +P V+ YN L++GL + G++D A+ +  +M
Sbjct: 474 VYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMRRM 533

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
               C PDI +YN +L AL K G  + A+ +L  +  S+  P  ++YNT++  L+  G  
Sbjct: 534 QDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVLGALSHAGMF 593

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           E+A  L  +M   G   D IT+ +++    + DQ
Sbjct: 594 EEAAKLMKEMNAIGFDYDLITYSSILEAIGKVDQ 627



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 100/383 (26%), Positives = 186/383 (48%), Gaps = 1/383 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  FC  G+   A  L++ M      P       L+  L ++D +  A  + 
Sbjct: 225 DTVTYSALISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLF 284

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      PD  TY  ++ GL K G++  A     EM   GC PD +  N ++  +   
Sbjct: 285 EEMRHQYCRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKA 344

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK-QCGIARAIEVLDDMAIEGCSPDIVT 294
           G+   AI  +++     C P ++TY  +I+ + + +  ++      + M   G SP   T
Sbjct: 345 GRLDDAIKLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFT 404

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ L++  CK  + + A++++  +  +G  P    Y +L+ +LG    +D  +++   + 
Sbjct: 405 YSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELK 464

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E   S +   Y ++I  L K G +D A++ F++M    C P++  YN ++  L + GML+
Sbjct: 465 ENCGSSSARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLD 524

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EAL  +  +    C P + +YN +++ LAK G  ++AM +   M ++ I PD +++ T++
Sbjct: 525 EALTTMRRMQDHGCIPDINSYNIILNALAKTGGPDRAMGMLCNMKQSAIKPDAVSYNTVL 584

Query: 475 WGFCRADQVEEAVDLLKEIGKRG 497
                A   EEA  L+KE+   G
Sbjct: 585 GALSHAGMFEEAAKLMKEMNAIG 607



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 110/422 (26%), Positives = 193/422 (45%), Gaps = 3/422 (0%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG-VPDTITYNMMVGGLCKRGQI 203
           +RN   D    + LIR L  +++  +  K++Q MV +   V   +  + ++  L     I
Sbjct: 112 KRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMI 171

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG-CPPYLITYTI 262
             A+A+  ++    C+P    YN+++  +   G++++    + +   +G C P  +TY+ 
Sbjct: 172 SKAVAIFYQIKARKCQPTAHAYNSMIIMLMHEGEYEKVHELYNEMSNEGQCFPDTVTYSA 231

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI   CK      AI +L++M   G  P    Y  L+    K      A+ +   +  + 
Sbjct: 232 LISAFCKLGRQDSAIWLLNEMKDNGMQPTAKIYTMLMALLFKLDNVHGALGLFEEMRHQY 291

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             P+  TY  L+  LG  G  D        M      P     N +IN L K G +D AI
Sbjct: 292 CRPDVFTYTELIRGLGKAGRLDEAYNFFHEMRREGCRPDTVLMNNMINFLGKAGRLDDAI 351

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
             F +M +  C P +VTYNT++ AL + +  ++E       + GS  SP   TY+ LIDG
Sbjct: 352 KLFEEMETLRCIPSVVTYNTIIKALFESKSRVSEISSWFERMKGSGISPSPFTYSILIDG 411

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K    EKAM+L  +M E G  P    + +LI    +A + + A +L +E+ +      
Sbjct: 412 FCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLANELFQELKENCGSSS 471

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y ++I  L K+ ++D A+ + + M      P+   ++ ++  +A  GM +EA    +
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVDLFDEMNRLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531

Query: 562 KL 563
           ++
Sbjct: 532 RM 533


>gi|357139229|ref|XP_003571186.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g16010-like [Brachypodium distachyon]
          Length = 628

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 118/409 (28%), Positives = 209/409 (51%), Gaps = 2/409 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
           ++I  L+   + EK  ++   M   G   PDT+TY+ ++   CK G+  SAI LL+EM  
Sbjct: 195 SMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSALISAFCKLGRQDSAIRLLNEMKD 254

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
           +G +P    Y  ++   F       A+G +++   + C P + TYT LI  + K      
Sbjct: 255 NGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQYCRPDVFTYTELIRGLGKAGRFDE 314

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A     +M  EGC PD V  N+++NF  K G+ DDAV +   + +    P+ +TYNT++ 
Sbjct: 315 AYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKLFEEMGTLQCIPSVVTYNTIIK 374

Query: 336 SL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           +L  S+     +    + M  +  SP+ FTY+ILI+G CK    ++A+    +M  K   
Sbjct: 375 ALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFCKTNRTEKAMMLLEEMDEKGFP 434

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P    Y +++ AL K    + A +L   L  +  S     Y  +I  L K G ++ A+ L
Sbjct: 435 PCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAVNL 494

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           + +M + G +P+   +  L+ G  RA  ++EA+  ++ + + G     ++Y ++++GL K
Sbjct: 495 FDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRMQEHGCIPDINSYNIILNGLAK 554

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +     A+++L  M  S  KPD   ++T++  ++  G+ EEA KL +++
Sbjct: 555 TGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLFEEAAKLMKEM 603



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 103/400 (25%), Positives = 190/400 (47%), Gaps = 1/400 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  FC  G+   A +L++ M      P       LI    +++ +  A  + 
Sbjct: 225 DTVTYSALISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLF 284

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      PD  TY  ++ GL K G+   A     EM   GC PD +  N ++  +   
Sbjct: 285 EEMRHQYCRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKA 344

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK-QCGIARAIEVLDDMAIEGCSPDIVT 294
           G+   A+  +++     C P ++TY  +I+ + + +  I+      + M   G SP   T
Sbjct: 345 GRLDDAVKLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFT 404

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ L++  CK  + + A++++  +  +G  P    Y +L+ +LG    +D   ++   + 
Sbjct: 405 YSILIDGFCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELK 464

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E   S +   Y ++I  L K G +D A+N F++M    C P++  YN ++  L + GML+
Sbjct: 465 ENCGSSSARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLD 524

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EAL  +  +    C P + +YN +++GLAK G   +AM +   M ++ I PD +++ T++
Sbjct: 525 EALTTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVL 584

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
                A   EEA  L+KE+   G +     Y  ++  + K
Sbjct: 585 GAMSHAGLFEEAAKLMKEMNVLGFEYDLITYSSILEAIGK 624



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 102/334 (30%), Positives = 170/334 (50%), Gaps = 1/334 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD      LIRGL +  R ++A      M   G  PDT+  N M+  L K G++  A+ L
Sbjct: 294 PDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAVKL 353

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGCPPYLITYTILIEQVC 268
            +EM    C P V+TYNTI++ +F++      I  W ++++  G  P   TY+ILI+  C
Sbjct: 354 FEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDGFC 413

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K     +A+ +L++M  +G  P    Y SL++   K  +YD A  +   L       ++ 
Sbjct: 414 KTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSSAR 473

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            Y  ++  LG  G  D    + D MN+   +P V+ YN L++GL + G++D A+ +  +M
Sbjct: 474 VYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMRRM 533

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
               C PDI +YN +L  L K G  + A+++L  +  S+  P  ++YNT++  ++  G  
Sbjct: 534 QEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSAIKPDAVSYNTVLGAMSHAGLF 593

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           E+A  L  +M   G   D IT+ +++    + D 
Sbjct: 594 EEAAKLMKEMNVLGFEYDLITYSSILEAIGKVDH 627



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 111/424 (26%), Positives = 196/424 (46%), Gaps = 3/424 (0%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGG-VPDTITYNMMVGGLCKRGQI 203
           +RN   D    + LIR L  +++  +  K++Q MV +   V   +  + ++  L     I
Sbjct: 112 KRNYEHDTSTYMALIRCLEVVEQYGEMWKMIQEMVRNPVCVVTPMELSDIIRMLGNAKMI 171

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG-CPPYLITYTI 262
             A+A+  ++ V  C+P    YN+++  +   G++++    + +   +G C P  +TY+ 
Sbjct: 172 SKAVAIFYQIKVRKCQPTAQAYNSMIIMLMHEGQYEKVHELYNEMSNEGHCFPDTVTYSA 231

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI   CK      AI +L++M   G  P    Y  L+    K      A+ +   +  + 
Sbjct: 232 LISAFCKLGRQDSAIRLLNEMKDNGMQPTAKIYTMLIALFFKLNNVHGALGLFEEMRHQY 291

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             P+  TY  L+  LG  G +D        M      P     N +IN L K G +D A+
Sbjct: 292 CRPDVFTYTELIRGLGKAGRFDEAYNFFHEMRREGCRPDTVVINNMINFLGKAGRLDDAV 351

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
             F +M +  C P +VTYNT++ AL + +  ++E       + GS  SP   TY+ LIDG
Sbjct: 352 KLFEEMGTLQCIPSVVTYNTIIKALFESKSRISEISSWFERMKGSGISPSPFTYSILIDG 411

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K    EKAM+L  +M E G  P    + +LI    +A + + A +L +E+ +      
Sbjct: 412 FCKTNRTEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDIAHELFQELKENCGSSS 471

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y ++I  L K+ ++D A+ + + M      P+   ++ ++  +A  GM +EA    +
Sbjct: 472 ARVYAVMIKHLGKAGRLDDAVNLFDEMNKLGCTPNVYAYNALMSGLARAGMLDEALTTMR 531

Query: 562 KLIE 565
           ++ E
Sbjct: 532 RMQE 535


>gi|299471526|emb|CBN80012.1| conserved unknown protein [Ectocarpus siliculosus]
          Length = 732

 Score =  191 bits (484), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 117/429 (27%), Positives = 209/429 (48%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A +L+  MA R   PD     + I    ++ R ++A  +L+ M   G  P+ I Y+  + 
Sbjct: 205 AVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAIS 264

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
              K GQ  +A+ LL EM   G  PDVITY+T++      G+++ A     +   KG   
Sbjct: 265 ACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVA 324

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            +ITY+I+I    K      A+ +L +M   G +PD++TY+S ++   K+G++++AV ++
Sbjct: 325 NIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLL 384

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
             +   G+ PN+I+Y  ++ +   RG W     +L  M      P V  Y+  I+   + 
Sbjct: 385 REMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQA 444

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
              ++A+    +M +    P++++YN+ + A  K G    A++LL  +     +P +ITY
Sbjct: 445 SRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITY 504

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           + +I   A     E+A+ L+ +M   GI+PD ++  T I    +    EEA+D+L E+  
Sbjct: 505 SAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPT 564

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G      +YR  I    K  +    I +L  M +    PD   +   +   + DG+ +E
Sbjct: 565 MGLVPDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKE 624

Query: 556 AYKLWQKLI 564
           A  L + ++
Sbjct: 625 ALVLLRDML 633



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/418 (25%), Positives = 200/418 (47%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G    A  ++D M  +   PD     + I       + E+A ++L  M   G  PD +TY
Sbjct: 165 GDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVLTY 224

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           +  +    K  + + A+ LL  M   G +P+VI Y+  +      G+++ A+   K+   
Sbjct: 225 SSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEMPA 284

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
            G  P +ITY+ +I+   K+     A  +L +M  +G   +I+TY+ ++    K G++++
Sbjct: 285 VGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEE 344

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           AV ++  +   G+ P+ ITY++ + +   +G W+    +L  M     +P   +Y I+I+
Sbjct: 345 AVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVIS 404

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
              K G    AI+   +M +    PD++ Y+  + A  +     +AL LL  +  +  +P
Sbjct: 405 ACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTP 464

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            +I+YN+ ID  AK G  + A+ L  +M  +G++PD IT+  +I       Q EEA+DL 
Sbjct: 465 NVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLF 524

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           +E+ ++G      +    I+   +    + A+ VL  M +    PD   + T +   A
Sbjct: 525 REMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACA 582



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 108/416 (25%), Positives = 194/416 (46%), Gaps = 1/416 (0%)

Query: 141 DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           D   R+  +P  H    L R   +     KA  VL  M   G  PD+  Y+  +      
Sbjct: 141 DKGGRQAGMPMSHLKATL-REAKQYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNA 199

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
            Q   A+ LL  M+  G  PDV+TY++ +       ++K+A+G  +    +G  P +I Y
Sbjct: 200 RQWERAVELLASMAARGTPPDVLTYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVY 259

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           +  I    K      A+++L +M   G +PD++TY+++++   K+G+++ A  ++  + +
Sbjct: 260 SAAISACRKGGQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPT 319

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +G+  N ITY+ ++ +    G W+    +L  M E   +P V TY+  I+   K G  + 
Sbjct: 320 KGVVANIITYSIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEE 379

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A+    +M  +   P+ ++Y  V+ A  K G   EA+ LL  +      P +I Y+  ID
Sbjct: 380 AVGLLREMPMEGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAID 439

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
             A+    E+A+ L  +M   G++P+ I++ + I    +  + + AV+LL+E+   G   
Sbjct: 440 ACAQASRWEQALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAP 499

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
               Y  VI      ++ + A+ +   M      PD    +T +   A  G  EEA
Sbjct: 500 DVITYSAVIASCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEA 555



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 200/415 (48%), Gaps = 2/415 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G+   A  L+  M      PD      +I    +  + E A ++L  M   G V + ITY
Sbjct: 270 GQWETAVDLLKEMPAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITY 329

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           ++++G   K GQ   A+ALL EM  +G  PDVITY++ +      G++++A+G  ++   
Sbjct: 330 SIVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPM 389

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           +G  P  I+Y I+I    K+     AI++L +M   G  PD++ Y++ ++   +  +++ 
Sbjct: 390 EGVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQ 449

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ ++  + + G+ PN I+YN+ + +    G      ++L  M     +P V TY+ +I 
Sbjct: 450 ALWLLREMPATGLTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIA 509

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
                   + A++ F +M  +   PD+V+ NT + A  + G   EAL +L  +      P
Sbjct: 510 SCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVP 569

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV-EEAVDL 489
             I+Y T ID  AK    ++ + L  +M   G++PD I++R  +   C  D + +EA+ L
Sbjct: 570 DAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAM-SACSVDGLWKEALVL 628

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           L+++   G       Y   I+   K  +   A  +L  M +    PD   F+  +
Sbjct: 629 LRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAI 683



 Score =  168 bits (426), Expect = 6e-39,   Method: Compositional matrix adjust.
 Identities = 101/426 (23%), Positives = 202/426 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++     RG+   A +L+  M  +  + +      +I    +  + E+A  +L+ M
Sbjct: 293 TYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQWEEAVALLREM 352

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  PD ITY+  +    K+GQ   A+ LL EM + G  P+ I+Y  ++      G++
Sbjct: 353 QENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPMEGVTPNAISYGIVISACAKRGRW 412

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++AI   ++    G PP +I Y+  I+   +     +A+ +L +M   G +P++++YNS 
Sbjct: 413 REAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATGLTPNVISYNSA 472

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K G+   AV ++  + + G+ P+ ITY+ ++ S      W+    +   M     
Sbjct: 473 IDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEALDLFREMQRQGI 532

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P V + N  IN   + G  + A++   +M +    PD ++Y T + A  K     E + 
Sbjct: 533 TPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDACAKGDRWKEIID 592

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           LL  ++    +P  I+Y   +   +  G  ++A+VL   M+  G+SPD +T+ + I    
Sbjct: 593 LLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPDVVTYNSAINACA 652

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  + +EA  LL+++   G     +++   I       +   A++VL  M +    P++ 
Sbjct: 653 KGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLFEMRALGVSPNEA 712

Query: 539 VFSTIV 544
            + T +
Sbjct: 713 TYLTAM 718



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 99/395 (25%), Positives = 186/395 (47%), Gaps = 40/395 (10%)

Query: 123 ILQNFCSR-GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           I+   C++ G+  +A  L+  M      PD     + I    +  + E+A  +L+ M M 
Sbjct: 331 IVIGACAKWGQWEEAVALLREMQENGVAPDVITYSSTISACAKKGQWEEAVGLLREMPME 390

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P+ I+Y +++    KRG+ R AI LL EM   G  PDVI Y+  +       +++QA
Sbjct: 391 GVTPNAISYGIVISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQA 450

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR-AIEVLDDMAIEGCSPDIVTYNSLVN 300
           +   ++    G  P +I+Y   I+  C + G ++ A+E+L +M   G +PD++TY++++ 
Sbjct: 451 LWLLREMPATGLTPNVISYNSAID-ACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIA 509

Query: 301 FSCKQGK-YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD--------------- 344
            SC  G+ +++A+ +   +  +G+ P+ ++ NT +++    G W+               
Sbjct: 510 -SCAMGRQWEEALDLFREMQRQGITPDVVSCNTAINACAQGGWWEEALDVLGEMPTMGLV 568

Query: 345 --------AVD---------KILDIMNEASH---SPTVFTYNILINGLCKYGLVDRAINS 384
                   A+D         +I+D++ E S    +P   +Y   ++     GL   A+  
Sbjct: 569 PDAISYRTAIDACAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVL 628

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
              M++    PD+VTYN+ + A  K G   EA  LL  +     +P + ++N  ID    
Sbjct: 629 LRDMLAVGLSPDVVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGN 688

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
                 A+ +  +M   G+SP++ T+ T ++   R
Sbjct: 689 GDQWGTAVEVLFEMRALGVSPNEATYLTAMYACKR 723



 Score =  102 bits (254), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 74/332 (22%), Positives = 144/332 (43%), Gaps = 37/332 (11%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++     RG+  +A  L+  M      PD       I    +  R E+A  +L+ M  +G
Sbjct: 402 VISACAKRGRWREAIDLLQEMQAHGVPPDVINYSAAIDACAQASRWEQALWLLREMPATG 461

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ I+YN  +    K G+ + A+ LL EM   G  PDVITY+ ++ +     ++++A+
Sbjct: 462 LTPNVISYNSAIDACAKTGRSKIAVELLREMPAHGLAPDVITYSAVIASCAMGRQWEEAL 521

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGI-ARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
             +++  R+G  P +++    I   C Q G    A++VL +M   G  PD ++Y + ++ 
Sbjct: 522 DLFREMQRQGITPDVVSCNTAI-NACAQGGWWEEALDVLGEMPTMGLVPDAISYRTAIDA 580

Query: 302 SCK-----------------------------------QGKYDDAVLVINNLLSRGMEPN 326
             K                                    G + +A++++ ++L+ G+ P+
Sbjct: 581 CAKGDRWKEIIDLLREMSTVGLTPDAISYRFAMSACSVDGLWKEALVLLRDMLAVGLSPD 640

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
            +TYN+ +++    G W     +L  M     +P V ++N  I+          A+    
Sbjct: 641 VVTYNSAINACAKGGRWKEATVLLRQMPTFGLAPDVNSFNAAIDACGNGDQWGTAVEVLF 700

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +M +    P+  TY T + A  + G  ++ +Q
Sbjct: 701 EMRALGVSPNEATYLTAMYACKRCGEKDDWMQ 732



 Score = 68.2 bits (165), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 49/192 (25%), Positives = 87/192 (45%)

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           +YG   +A++  ++M  +  +PD   Y++ + A         A++LL  +      P ++
Sbjct: 163 QYGDWRKALDVLDRMQEQGVKPDSQNYSSAIAACGNARQWERAVELLASMAARGTPPDVL 222

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TY++ I   AK    ++A+ L   M   G+ P+ I +   I    +  Q E AVDLLKE+
Sbjct: 223 TYSSAIAACAKVSRWKEAVGLLRSMKGQGVKPNVIVYSAAISACRKGGQWETAVDLLKEM 282

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
              G       Y  VI    K  + + A ++L  M +     +   +S ++   A  G  
Sbjct: 283 PAVGLAPDVITYSTVIDACAKRGQWEPAFRLLMEMPTKGVVANIITYSIVIGACAKWGQW 342

Query: 554 EEAYKLWQKLIE 565
           EEA  L +++ E
Sbjct: 343 EEAVALLREMQE 354


>gi|297724097|ref|NP_001174412.1| Os05g0393900 [Oryza sativa Japonica Group]
 gi|255676341|dbj|BAH93140.1| Os05g0393900 [Oryza sativa Japonica Group]
          Length = 553

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 215/448 (47%), Gaps = 10/448 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI--RIDRIEKASK 173
           D      +     S  +   A  ++D MA     PD   C  L+ G+   R+ R + A +
Sbjct: 101 DAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLV-GVYACRLRRFDAAYE 159

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V++ MV +G  PD +TY+ ++ GLC  GQ+  A+ +LD M   GC+P+  TY  I+    
Sbjct: 160 VVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYC 219

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+  +A       +  G  P   TY +L+E +CK         +L++   +G +PD++
Sbjct: 220 TGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVI 279

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY+S ++  CK G+ D +  +++ +LS G++P+ +T N LL  +       A  ++L+  
Sbjct: 280 TYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECS 339

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E      V  YN ++  LC        +  F  M  K   P+  T+N V+ +LCK G L
Sbjct: 340 AELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRL 399

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           ++A   L LL        +ITYNTLI  L+  G   +  +L  QM+E GI+P+DIT+  +
Sbjct: 400 HKA---LFLLRSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLV 456

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I   CR ++   A+    +     +    SA+  +I GL     +     ++  ++   +
Sbjct: 457 IDCLCREEKFLVALCCFYQ--SLEDDFFPSAFLSIIRGLIVGGMLGQLHTLIGCVLGQGF 514

Query: 534 KPDDTVFSTIVKKVADDGMTE--EAYKL 559
             +  ++  ++K +  +G  +  E YK+
Sbjct: 515 IIEVYIYQELIKALCKNGYCQSVEMYKV 542



 Score =  152 bits (383), Expect = 6e-34,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 171/367 (46%), Gaps = 5/367 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T + ++   CS G++ +A  ++D+M      P+ H    ++       RI +A 
Sbjct: 169 VAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAK 228

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+ SG  P T TYN++V  LCK G      ALL+E +  G  PDVITY++ +  +
Sbjct: 229 RLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGL 288

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  ++       L  G  P  +T  IL++ VC+      A  +L+  A  G   ++
Sbjct: 289 CKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANV 348

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V YN+++   C + ++   V +  ++  +G+ PNS T+N ++HSL   G    + K L +
Sbjct: 349 VNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLG---RLHKALFL 405

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +       TV TYN LI  L   G  +       QM+     P+ +TY+ V+  LC+E  
Sbjct: 406 LRSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEK 465

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
              AL   +        P    + ++I GL   G + +   L G ++  G   +   ++ 
Sbjct: 466 FLVALCCFYQSLEDDFFPS--AFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIYQE 523

Query: 473 LIWGFCR 479
           LI   C+
Sbjct: 524 LIKALCK 530



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 174/362 (48%), Gaps = 6/362 (1%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN--GKFKQAI 242
           PD   +  +   L    +  +A+A+LD M+  G  PD     T+L  ++     +F  A 
Sbjct: 100 PDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAA-CTVLVGVYACRLRRFDAAY 158

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +  +  G  P ++TY+ LI  +C    +A A+ VLD M  EGC P+  TY  +V+  
Sbjct: 159 EVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAY 218

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G+  +A  ++N +++ G  P++ TYN L+ +L   G ++ VD +L+       +P V
Sbjct: 219 CTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDV 278

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+  ++GLCK G +D++    ++M+S   QP  VT N +L  +C+      A +LL  
Sbjct: 279 ITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLEC 338

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
                    ++ YNT++  L  +      + L+  M + GI+P+  T   ++   C+  +
Sbjct: 339 SAELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGR 398

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + +A+ LL+        +    Y  +I  L  S + +    +L  MI     P+D  +S 
Sbjct: 399 LHKALFLLRSKEFVATVI---TYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSL 455

Query: 543 IV 544
           ++
Sbjct: 456 VI 457



 Score =  122 bits (305), Expect = 7e-25,   Method: Compositional matrix adjust.
 Identities = 76/297 (25%), Positives = 149/297 (50%), Gaps = 8/297 (2%)

Query: 272 GIARAIEVLDDM-AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           G  RA+ +LD+M A+    PD   + ++        +   A+ V++ + + G+ P++   
Sbjct: 81  GADRALHLLDEMRALLRRRPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAAC 140

Query: 331 NTLLHSLGSRGC----WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
             L+   G   C    +DA  +++  M     +P V TY+ LI+GLC  G V  A+   +
Sbjct: 141 TVLV---GVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLD 197

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M+ + CQP+  TY  ++ A C  G ++EA +LL+ +  S  +P   TYN L++ L K G
Sbjct: 198 LMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVG 257

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
             E+   L  +    G +PD IT+ + + G C+A +++++  L+ ++   G +       
Sbjct: 258 AFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLN 317

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +++ G+C+S     A ++LE      +  +   ++T+++K+ D+       KL+  +
Sbjct: 318 ILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRKLCDEHRWLSVVKLFTDM 374



 Score = 75.1 bits (183), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 48/240 (20%), Positives = 103/240 (42%), Gaps = 5/240 (2%)

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEAS----HSPTVFTYNILINGLCKYGLVDRAINSF 385
           YN L+ +          D+ L +++E        P    +  +   L        A+   
Sbjct: 66  YNRLMSAHAGTRDGAGADRALHLLDEMRALLRRRPDAACFTTVAAALSSASRPGAALAVL 125

Query: 386 NQMVSKNCQPDIVTYNTVLGAL-CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           + M +    PD      ++G   C+    + A +++  +  +  +P ++TY+TLI GL  
Sbjct: 126 DAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCS 185

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G + +A+ +   M+E G  P+  T+  ++  +C   ++ EA  LL  +   G     + 
Sbjct: 186 AGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTAT 245

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y +++  LCK    +    +LE   +  + PD   +S+ +  +   G  ++++ L  K++
Sbjct: 246 YNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKML 305


>gi|125535814|gb|EAY82302.1| hypothetical protein OsI_37513 [Oryza sativa Indica Group]
          Length = 578

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 193/403 (47%), Gaps = 8/403 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+ GL+   R++ A K  +  +     PD  T+N ++ GLC+ GQ+R A  +  ++   G
Sbjct: 162 LLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWG 221

Query: 218 CEPDVITYNTILRTMFDNG---KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             P V TYN+++      G            K+ +  G  P  +T+ +LI   CK    A
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+ V ++M  +G +  +VTYNSL++  C +GK ++ V ++  +   G+ PN IT+  +L
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                +G     +  +D M E +  P V  Y ILI+G  + G ++ A+     M  K   
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKGIS 401

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P++ TYN ++    + G    A  LL  +        ++TYN LI  L  KG + KA+ L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             +M E G+ P+ +T+ T+I GFC    ++ A ++   + K   +     Y + I   C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
             K+D A  +L  M+     P+   + TI      +GM E+ Y
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEKGY 559



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 105/376 (27%), Positives = 185/376 (49%), Gaps = 3/376 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L       ++  A K      RR   PD +    +I GL RI ++ KA  V + +  
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 181 SGGVPDTITYNMMVGGLCKR---GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            G  P   TYN ++ G CK+   G +     LL EM  +G  P  +T+  ++     N  
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A+  +++  ++G    ++TY  LI  +C +  +   ++++++M   G SP+ +T+  
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++   CK+G   DA   I+ +  R +EP+ + Y  L+      G  +    + + M +  
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKEAMAKKG 399

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP V TYN LI G  + G    A    ++M  K  + D+VTYN ++GALC +G + +A+
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL  ++     P  +TYNT+I G   KG ++ A  +  +M +     + +T+   I  F
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519

Query: 478 CRADQVEEAVDLLKEI 493
           C+  +++EA DLL E+
Sbjct: 520 CQIGKMDEANDLLNEM 535



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 106/393 (26%), Positives = 182/393 (46%), Gaps = 3/393 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P T + N ++ GL    ++  A             PD+ T+NT++  +   G+ ++A   
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPDIVTYNSLVNF 301
            KD    G  P + TY  LI+  CK+ G      V   L +M   G SP  VT+  L+N 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK      AV V   +  +G+  + +TYN+L+  L S G  +   K+++ M +   SP 
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             T+  ++ G CK G++  A +  + M  +N +PD+V Y  ++    + G + +A+ +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVKE 393

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +     SP + TYN LI G ++ G    A  L  +M E GI  D +T+  LI   C   
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V +AV LL E+ + G +  +  Y  +I G C    +  A ++   M   R + +   ++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             +K     G  +EA  L  ++++  +   G T
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 82/294 (27%), Positives = 144/294 (48%), Gaps = 5/294 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C       A ++ + M ++          +LI GL    ++E+  K+++ M   G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ IT+  ++ G CK+G +  A   +D M+    EPDV+ Y  ++      GK + A+
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAM 389

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +   +KG  P + TY  LI    +      A  +LD+M  +G   D+VTYN L+   
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +G+   AV +++ +   G+EPN +TYNT++     +G   +  +I   M +      V
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANV 509

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            TYN+ I   C+ G +D A +  N+M+ K   P+ +TY T+     KEGM+ + 
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEKG 558



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 77/228 (33%), Positives = 119/228 (52%), Gaps = 4/228 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T   +L+ FC +G + DA+  ID M  RN  PD      LI G  R+ ++E A  V 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYTILIDGYRRLGKMEDAMAVK 392

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G  P+  TYN ++ G  + G  RSA  LLDEM   G E DV+TYN ++  +   
Sbjct: 393 EAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCK 452

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC--SPDIV 293
           G+ ++A+    +    G  P  +TY  +I+  C +  I  A E+   M  E C    ++V
Sbjct: 453 GEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM--EKCRKRANVV 510

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           TYN  + + C+ GK D+A  ++N +L + + PN ITY T+   +  +G
Sbjct: 511 TYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 3/202 (1%)

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
           H P+  + N L+ GL     VD A  +F   + +   PDI T+NTV+  LC+ G L +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGC---MEKAMVLYGQMMENGISPDDITHRTLI 474
            +   +     +P + TYN+LIDG  KKG    M    +L  +M+E GISP  +T   LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C+      AV + +E+ ++G       Y  +I GLC   KV+  ++++E M      
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 535 PDDTVFSTIVKKVADDGMTEEA 556
           P++  F  ++K     GM  +A
Sbjct: 332 PNEITFGCVLKGFCKKGMMADA 353


>gi|297849294|ref|XP_002892528.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297338370|gb|EFH68787.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 606

 Score =  190 bits (483), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 106/405 (26%), Positives = 211/405 (52%), Gaps = 5/405 (1%)

Query: 155 CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS 214
           C  L+  L++ +R      + + M+     P+  T+N+++  LCK G++  A  ++++M 
Sbjct: 191 CKPLMVALLKQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMK 250

Query: 215 VSGCEPDVITYNTILR---TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQC 271
           V G  P+V++YNT++     +  NGK  +A    K+ +     P L T+ ILI+   K  
Sbjct: 251 VYGYSPNVVSYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDD 310

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            +  +++V  +M  +   P+++TYNSL+N  C  GK ++A+ + + ++S G++PN ITY+
Sbjct: 311 NLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYH 370

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           +L++     G       + D +      PT   YN+LI+  CK G +D       +M  +
Sbjct: 371 SLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMERE 430

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              PD+ TYN ++  LC+ G +  A +L   L      P L+T++ L++G   +G   KA
Sbjct: 431 GIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKA 489

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK-RGNKMRNSAYRLVIH 510
            +L  +M + G+ P  +T+  ++ G+C+   ++ A ++  ++ K R  +M  ++Y +++ 
Sbjct: 490 AMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQ 549

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
           G  +  K++ A  +L  M+     P+   +  + +++ D G   +
Sbjct: 550 GYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEMVDKGFVPD 594



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 94/316 (29%), Positives = 158/316 (50%), Gaps = 4/316 (1%)

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            +K+ +R+   P + T+ ++I  +CK   + +A +V++DM + G SP++V+YN+L++  C
Sbjct: 210 LYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNTLIDGYC 269

Query: 304 K---QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
           K    GK   A  V+  ++   + PN  T+N L+             K+   M +    P
Sbjct: 270 KLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIP 329

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V TYN LINGLC  G ++ AI   ++MVS   QP+++TY++++   CK GM+ EAL + 
Sbjct: 330 NVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMF 389

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             + G    P    YN LID   K G ++    L  +M   GI PD  T+  LI G CR 
Sbjct: 390 DSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRN 449

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             +E A  L  ++  +G       + +++ G C   +   A  +L+ M     KP    +
Sbjct: 450 GNIEAAKKLFDQLTNKGLP-DLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTY 508

Query: 541 STIVKKVADDGMTEEA 556
           + ++K    +G  + A
Sbjct: 509 NIMMKGYCKEGNLKAA 524



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 106/369 (28%), Positives = 190/369 (51%), Gaps = 7/369 (1%)

Query: 134 TDASKLIDIMARRNQIPD-FHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
            D   L   M RR   P+ F F + +I  L +  ++ KA  V++ M + G  P+ ++YN 
Sbjct: 205 ADVEYLYKEMIRRKIQPNVFTFNV-VINALCKTGKMNKARDVMEDMKVYGYSPNVVSYNT 263

Query: 193 MVGGLCK---RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           ++ G CK    G++  A A+L EM  +   P++ T+N ++   + +     ++  +K+ L
Sbjct: 264 LIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEML 323

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            +   P +ITY  LI  +C    I  AI + D M   G  P+++TY+SL+N  CK G   
Sbjct: 324 DQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMK 383

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A+ + +++  +G  P +  YN L+ +    G  D    + + M      P V TYN LI
Sbjct: 384 EALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLI 443

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
            GLC+ G ++ A   F+Q+ +K   PD+VT++ ++   C  G   +A  LL  ++     
Sbjct: 444 AGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLK 502

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQM-MENGISPDDITHRTLIWGFCRADQVEEAVD 488
           P  +TYN ++ G  K+G ++ A  +  QM  E  +  +  ++  L+ G+ +  ++E+A  
Sbjct: 503 PRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANM 562

Query: 489 LLKEIGKRG 497
           LL E+ ++G
Sbjct: 563 LLNEMLEKG 571



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 94/330 (28%), Positives = 164/330 (49%), Gaps = 5/330 (1%)

Query: 121 NKILQNFC---SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           N ++  +C     GK+  A  ++  M      P+      LI G  + D +  + KV + 
Sbjct: 262 NTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKE 321

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+    +P+ ITYN ++ GLC  G+I  AI + D+M  +G +P++ITY++++     NG 
Sbjct: 322 MLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGM 381

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            K+A+  +     +G  P    Y +LI+  CK   I     + ++M  EG  PD+ TYN 
Sbjct: 382 MKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNC 441

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   C+ G  + A  + + L ++G+ P+ +T++ L+    SRG       +L  M++  
Sbjct: 442 LIAGLCRNGNIEAAKKLFDQLTNKGL-PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMG 500

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQM-VSKNCQPDIVTYNTVLGALCKEGMLNEA 416
             P   TYNI++ G CK G +  A N   QM   +  + ++ +YN +L    ++G L +A
Sbjct: 501 LKPRHLTYNIMMKGYCKEGNLKAATNMRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDA 560

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
             LL+ +      P  ITY  + + +  KG
Sbjct: 561 NMLLNEMLEKGLVPNRITYEIVKEEMVDKG 590



 Score =  129 bits (325), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 72/263 (27%), Positives = 136/263 (51%), Gaps = 3/263 (1%)

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           KQ +  D   +   ++ R ++PN  T+N ++++L   G  +    +++ M    +SP V 
Sbjct: 200 KQNRSADVEYLYKEMIRRKIQPNVFTFNVVINALCKTGKMNKARDVMEDMKVYGYSPNVV 259

Query: 364 TYNILINGLCKYG---LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +YN LI+G CK G    + +A     +MV     P++ T+N ++    K+  L  +L++ 
Sbjct: 260 SYNTLIDGYCKLGGNGKMYKADAVLKEMVENEVSPNLTTFNILIDGFWKDDNLPGSLKVF 319

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P +ITYN+LI+GL   G + +A+ +  +M+  G+ P+ IT+ +LI GFC+ 
Sbjct: 320 KEMLDQDVIPNVITYNSLINGLCNGGKINEAIGMRDKMVSAGVQPNLITYHSLINGFCKN 379

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             ++EA+D+   +  +G +     Y ++I   CK  K+D    + E M      PD   +
Sbjct: 380 GMMKEALDMFDSVKGQGTRPTTRMYNMLIDAYCKLGKIDDGFALKEEMEREGIVPDVGTY 439

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++  +  +G  E A KL+ +L
Sbjct: 440 NCLIAGLCRNGNIEAAKKLFDQL 462



 Score =  119 bits (299), Expect = 3e-24,   Method: Compositional matrix adjust.
 Identities = 85/322 (26%), Positives = 150/322 (46%), Gaps = 8/322 (2%)

Query: 113 VENDEKTN----NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI 168
           VEN+   N    N ++  F     L  + K+   M  ++ IP+     +LI GL    +I
Sbjct: 288 VENEVSPNLTTFNILIDGFWKDDNLPGSLKVFKEMLDQDVIPNVITYNSLINGLCNGGKI 347

Query: 169 EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
            +A  +   MV +G  P+ ITY+ ++ G CK G ++ A+ + D +   G  P    YN +
Sbjct: 348 NEAIGMRDKMVSAGVQPNLITYHSLINGFCKNGMMKEALDMFDSVKGQGTRPTTRMYNML 407

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           +      GK        ++  R+G  P + TY  LI  +C+   I  A ++ D +  +G 
Sbjct: 408 IDAYCKLGKIDDGFALKEEMEREGIVPDVGTYNCLIAGLCRNGNIEAAKKLFDQLTNKGL 467

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD+VT++ L+   C +G+   A +++  +   G++P  +TYN ++      G   A   
Sbjct: 468 -PDLVTFHILMEGYCSRGESRKAAMLLKEMSKMGLKPRHLTYNIMMKGYCKEGNLKAATN 526

Query: 349 ILDIM-NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +   M  E      V +YN+L+ G  + G ++ A    N+M+ K   P+ +TY  V   +
Sbjct: 527 MRTQMEKERRLRMNVASYNVLLQGYSQKGKLEDANMLLNEMLEKGLVPNRITYEIVKEEM 586

Query: 408 CKEGMLNEALQLLHLLNGSSCS 429
             +G + +     HL N S+ S
Sbjct: 587 VDKGFVPDIEG--HLFNVSTKS 606


>gi|255661032|gb|ACU25685.1| pentatricopeptide repeat-containing protein [Stachytarpheta
           cayennensis]
          Length = 373

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 111/368 (30%), Positives = 190/368 (51%), Gaps = 1/368 (0%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I+ A +V + M  S   PD + YN M+ G  + G+I+  I L + M     + +V+++N 
Sbjct: 6   IDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGREDSQ-NVVSFNI 64

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++R +F NG   +AI  W+   + G      TY IL++  CK   I +++ VL     +G
Sbjct: 65  MMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEKG 124

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D   Y++++N  CK+ K D+AV V+N ++  G  PN+  YNTL++       +D   
Sbjct: 125 GVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAI 184

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M   + SPTV TYN LINGLCK      A +   +M+ K  +P ++TY+ ++  L
Sbjct: 185 RVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGL 244

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C+   +  ALQL + +  +   P +   N LI GL   G  + A++LY  M     +P+ 
Sbjct: 245 CQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNL 304

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +TH TL+ GF +   +  A+ +   I + G +    +Y + + GLC   ++  AI  L+ 
Sbjct: 305 VTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRISFAILFLQD 364

Query: 528 MISSRYKP 535
            ++ +  P
Sbjct: 365 ALAKKIAP 372



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 88/299 (29%), Positives = 155/299 (51%), Gaps = 1/299 (0%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   I  A  V  +MA    SPD V YN+++N   + G+  D + +   L+ R    N 
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWE-LMGREDSQNV 59

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +++N ++  L   G  D    I ++M ++       TY IL++G CK G +++++     
Sbjct: 60  VSFNIMMRGLFGNGDVDKAISIWELMTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGI 119

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
              K    D   Y+ ++  LCKE  L+EA+ +L+ +  +  +P    YNTLI+G      
Sbjct: 120 AEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSK 179

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            + A+ ++ +M     SP  +T+ TLI G C+ ++  EA DL+KE+ ++G K     Y L
Sbjct: 180 FDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSL 239

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           ++ GLC+  KV+MA+Q+   +IS+  KPD  + + ++  +   G T+ A  L+  +  W
Sbjct: 240 LMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRW 298



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 93/367 (25%), Positives = 159/367 (43%), Gaps = 36/367 (9%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C+ G I  A  +  EM+ S   PD + YN +L   F  G+ K  I  W+   R+      
Sbjct: 1   CESGDIDGAERVYKEMAESKVSPDAVVYNAMLNGFFRAGRIKDCIELWELMGRED----- 55

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                          S ++V++N ++      G  D A+ +   
Sbjct: 56  -------------------------------SQNVVSFNIMMRGLFGNGDVDKAISIWEL 84

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G   +S TY  L+      G  +   ++L I  E       F Y+ +INGLCK   
Sbjct: 85  MTQSGFVEDSTTYGILVDGFCKNGYINKSLRVLGIAEEKGGVLDAFAYSAMINGLCKEAK 144

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +D A++  N M+     P+   YNT++         ++A+++   +  ++CSP ++TYNT
Sbjct: 145 LDEAVSVLNGMIKNGGTPNAHVYNTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNT 204

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+GL K     +A  L  +M+E G  P  IT+  L+ G C+  +VE A+ L  ++   G
Sbjct: 205 LINGLCKGERFAEAYDLVKEMLEKGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNG 264

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K       ++IHGLC   K  +A+ +   M      P+    +T+++    DG    A 
Sbjct: 265 LKPDVQMLNILIHGLCSVGKTQLALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNAL 324

Query: 558 KLWQKLI 564
            +W +++
Sbjct: 325 GIWARIL 331



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 83/317 (26%), Positives = 150/317 (47%), Gaps = 6/317 (1%)

Query: 83  HVLAVNKKLRGL----TITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +V++ N  +RGL     + K      L +  G FVE D  T   ++  FC  G +  + +
Sbjct: 58  NVVSFNIMMRGLFGNGDVDKAISIWELMTQSG-FVE-DSTTYGILVDGFCKNGYINKSLR 115

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           ++ I   +  + D      +I GL +  ++++A  VL  M+ +GG P+   YN ++ G  
Sbjct: 116 VLGIAEEKGGVLDAFAYSAMINGLCKEAKLDEAVSVLNGMIKNGGTPNAHVYNTLINGFV 175

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
              +   AI +  EM  + C P V+TYNT++  +    +F +A    K+ L KG  P +I
Sbjct: 176 GVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLEKGWKPCVI 235

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY++L++ +C+   +  A+++ + +   G  PD+   N L++  C  GK   A+++  ++
Sbjct: 236 TYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQLALMLYFDM 295

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
                 PN +T+NTL+      G       I   +      P + +YNI + GLC    +
Sbjct: 296 NRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLKGLCSCSRI 355

Query: 379 DRAINSFNQMVSKNCQP 395
             AI      ++K   P
Sbjct: 356 SFAILFLQDALAKKIAP 372



 Score = 92.0 bits (227), Expect = 7e-16,   Method: Compositional matrix adjust.
 Identities = 56/206 (27%), Positives = 102/206 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  F    K  DA ++   M   N  P       LI GL + +R  +A  +++ M+ 
Sbjct: 168 NTLINGFVGVSKFDDAIRVFREMGSTNCSPTVVTYNTLINGLCKGERFAEAYDLVKEMLE 227

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  ITY++++ GLC+  ++  A+ L +++  +G +PDV   N ++  +   GK + 
Sbjct: 228 KGWKPCVITYSLLMKGLCQGHKVEMALQLWNQVISNGLKPDVQMLNILIHGLCSVGKTQL 287

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  + D  R  C P L+T+  L+E   K   I  A+ +   +   G  PDIV+YN  + 
Sbjct: 288 ALMLYFDMNRWNCAPNLVTHNTLMEGFYKDGDIRNALGIWARILRNGLQPDIVSYNITLK 347

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPN 326
             C   +   A+L + + L++ + P+
Sbjct: 348 GLCSCSRISFAILFLQDALAKKIAPS 373


>gi|240254191|ref|NP_174467.4| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
 gi|357528959|sp|Q9C6S6.2|PPR67_ARATH RecName: Full=Putative pentatricopeptide repeat-containing protein
           At1g31840
 gi|332193282|gb|AEE31403.1| pentatricopeptide (PPR) repeat-containing protein [Arabidopsis
           thaliana]
          Length = 840

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 133/555 (23%), Positives = 249/555 (44%), Gaps = 75/555 (13%)

Query: 84  VLAVNKKLRGLTITK---KSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLI 140
           +++ NK L+GL++ +    S   SL    GP    +  T   ++  FC RG++  A  L 
Sbjct: 252 IVSCNKVLKGLSVDQIEVASRLLSLVLDCGP--APNVVTFCTLINGFCKRGEMDRAFDLF 309

Query: 141 DIMARRNQIPDFHFCINLIRGLIR-----------------------------IDRIEK- 170
            +M +R   PD      LI G  +                             ID   K 
Sbjct: 310 KVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKS 369

Query: 171 -----ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
                AS V + M+  G  P+ +TY +++ GLC+ G+I  A  +  ++   G EP ++TY
Sbjct: 370 GDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILKRGMEPSIVTY 429

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ--------------- 270
           ++++      G  +     ++D ++ G PP ++ Y +L++ + KQ               
Sbjct: 430 SSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKMLG 489

Query: 271 -----------------CGIAR---AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
                            C + R   A++V   M I G  PD+ T+ +++  S  +G+ ++
Sbjct: 490 QSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEE 549

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ +   +   G+EP+++ Y TL+ +           ++ D+M     S  +   N++I+
Sbjct: 550 ALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIH 609

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
            L K   ++ A   FN ++    +PDIVTYNT++   C    L+EA ++  LL  +   P
Sbjct: 610 LLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGP 669

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             +T   LI  L K   M+ A+ ++  M E G  P+ +T+  L+  F ++  +E +  L 
Sbjct: 670 NTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLF 729

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           +E+ ++G      +Y ++I GLCK  +VD A  +    I ++  PD   ++ +++     
Sbjct: 730 EEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKV 789

Query: 551 GMTEEAYKLWQKLIE 565
           G   EA  L++ ++ 
Sbjct: 790 GRLVEAALLYEHMLR 804



 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 113/437 (25%), Positives = 223/437 (51%), Gaps = 2/437 (0%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           FC +G++T A     ++  R        C  +++GL  +D+IE AS++L +++  G  P+
Sbjct: 228 FC-KGEVTKALDFHRLVMERGFRVGIVSCNKVLKGL-SVDQIEVASRLLSLVLDCGPAPN 285

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
            +T+  ++ G CKRG++  A  L   M   G EPD+I Y+T++   F  G        + 
Sbjct: 286 VVTFCTLINGFCKRGEMDRAFDLFKVMEQRGIEPDLIAYSTLIDGYFKAGMLGMGHKLFS 345

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
             L KG    ++ ++  I+   K   +A A  V   M  +G SP++VTY  L+   C+ G
Sbjct: 346 QALHKGVKLDVVVFSSTIDVYVKSGDLATASVVYKRMLCQGISPNVVTYTILIKGLCQDG 405

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           +  +A  +   +L RGMEP+ +TY++L+      G   +   + + M +  + P V  Y 
Sbjct: 406 RIYEAFGMYGQILKRGMEPSIVTYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYG 465

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           +L++GL K GL+  A+    +M+ ++ + ++V +N+++   C+    +EAL++  L+   
Sbjct: 466 VLVDGLSKQGLMLHAMRFSVKMLGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIY 525

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P + T+ T++     +G +E+A+ L+ +M + G+ PD + + TLI  FC+  +    
Sbjct: 526 GIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIG 585

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + L   + +       +   +VIH L K  +++ A +    +I  + +PD   ++T++  
Sbjct: 586 LQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICG 645

Query: 547 VADDGMTEEAYKLWQKL 563
                  +EA ++++ L
Sbjct: 646 YCSLRRLDEAERIFELL 662



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 99/381 (25%), Positives = 183/381 (48%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++  FC  G L     L + M +    PD      L+ GL +   +  A +    M
Sbjct: 428 TYSSLIDGFCKCGNLRSGFALYEDMIKMGYPPDVVIYGVLVDGLSKQGLMLHAMRFSVKM 487

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +      + + +N ++ G C+  +   A+ +   M + G +PDV T+ T++R     G+ 
Sbjct: 488 LGQSIRLNVVVFNSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRL 547

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A+  +    + G  P  + Y  LI+  CK       +++ D M     S DI   N +
Sbjct: 548 EEALFLFFRMFKMGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVV 607

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K  + +DA    NNL+   MEP+ +TYNT++    S    D  ++I +++     
Sbjct: 608 IHLLFKCHRIEDASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPF 667

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   T  ILI+ LCK   +D AI  F+ M  K  +P+ VTY  ++    K   +  + +
Sbjct: 668 GPNTVTLTILIHVLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFK 727

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +     SP +++Y+ +IDGL K+G +++A  ++ Q ++  + PD + +  LI G+C
Sbjct: 728 LFEEMQEKGISPSIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYC 787

Query: 479 RADQVEEAVDLLKEIGKRGNK 499
           +  ++ EA  L + + + G K
Sbjct: 788 KVGRLVEAALLYEHMLRNGVK 808



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 86/353 (24%), Positives = 151/353 (42%), Gaps = 35/353 (9%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C   +  +A K+  +M      PD      ++R  I   R+E+A  +   M  
Sbjct: 500 NSLIDGWCRLNRFDEALKVFRLMGIYGIKPDVATFTTVMRVSIMEGRLEEALFLFFRMFK 559

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD + Y  ++   CK  +    + L D M  +    D+   N ++  +F   + + 
Sbjct: 560 MGLEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIED 619

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A  F+ + +     P ++TY  +I   C    +  A  + + + +    P+ VT   L++
Sbjct: 620 ASKFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIH 679

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK    D A+ + + +  +G +PN++TY  L+         +   K+ + M E   SP
Sbjct: 680 VLCKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISP 739

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           ++ +Y+I+I+GLCK G VD A N F+Q +     PD+V Y  ++   CK G L E     
Sbjct: 740 SIVSYSIIIDGLCKRGRVDEATNIFHQAIDAKLLPDVVAYAILIRGYCKVGRLVE----- 794

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
                                         A +LY  M+ NG+ PDD+  R L
Sbjct: 795 ------------------------------AALLYEHMLRNGVKPDDLLQRAL 817



 Score =  103 bits (257), Expect = 3e-19,   Method: Compositional matrix adjust.
 Identities = 73/284 (25%), Positives = 119/284 (41%), Gaps = 35/284 (12%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      ++  FC   K T   +L D+M R     D   C  +I  L +  RIE AS
Sbjct: 562 LEPDALAYCTLIDAFCKHMKPTIGLQLFDLMQRNKISADIAVCNVVIHLLFKCHRIEDAS 621

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K    ++     PD +TYN M+ G C   ++  A  + + + V+   P+ +T   ++  +
Sbjct: 622 KFFNNLIEGKMEPDIVTYNTMICGYCSLRRLDEAERIFELLKVTPFGPNTVTLTILIHVL 681

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             N     AI  +     KG  P  +TY  L++   K   I  + ++ ++M  +G SP I
Sbjct: 682 CKNNDMDGAIRMFSIMAEKGSKPNAVTYGCLMDWFSKSVDIEGSFKLFEEMQEKGISPSI 741

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V+Y+ +++  CK+G+ D+A                     + H         A+D     
Sbjct: 742 VSYSIIIDGLCKRGRVDEA-------------------TNIFHQ--------AID----- 769

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              A   P V  Y ILI G CK G +  A   +  M+    +PD
Sbjct: 770 ---AKLLPDVVAYAILIRGYCKVGRLVEAALLYEHMLRNGVKPD 810



 Score = 68.9 bits (167), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 75/344 (21%), Positives = 131/344 (38%), Gaps = 96/344 (27%)

Query: 318 LLSRGMEPNSI--------------TYNTLLHSLGSRGCWDAVDKILD--IMNEAS---- 357
           LLS   EPNS               ++ T+ H L   G +D  DK+ D  I N       
Sbjct: 76  LLSLESEPNSALKYFRWAEISGKDPSFYTIAHVLIRNGMFDVADKVFDEMITNRGKDFNV 135

Query: 358 ------HSPTVFTYNILINGLCKYGLVDRAI----------------------------- 382
                  S        L+   C+YG+VD+A+                             
Sbjct: 136 LGSIRDRSLDADVCKFLMECCCRYGMVDKALEIFVYSTQLGVVIPQDSVYRMLNSLIGSD 195

Query: 383 ------NSFNQMVSKNCQPDIVT-YNTVLGALCKEGMLNEAL------------------ 417
                 + F+++     +P  V+ +  VL AL  +G + +AL                  
Sbjct: 196 RVDLIADHFDKLCRGGIEPSGVSAHGFVLDALFCKGEVTKALDFHRLVMERGFRVGIVSC 255

Query: 418 ----------------QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
                           +LL L+     +P ++T+ TLI+G  K+G M++A  L+  M + 
Sbjct: 256 NKVLKGLSVDQIEVASRLLSLVLDCGPAPNVVTFCTLINGFCKRGEMDRAFDLFKVMEQR 315

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           GI PD I + TLI G+ +A  +     L  +   +G K+    +   I    KS  +  A
Sbjct: 316 GIEPDLIAYSTLIDGYFKAGMLGMGHKLFSQALHKGVKLDVVVFSSTIDVYVKSGDLATA 375

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             V + M+     P+   ++ ++K +  DG   EA+ ++ ++++
Sbjct: 376 SVVYKRMLCQGISPNVVTYTILIKGLCQDGRIYEAFGMYGQILK 419


>gi|414591641|tpg|DAA42212.1| TPA: hypothetical protein ZEAMMB73_141452 [Zea mays]
          Length = 472

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 105/353 (29%), Positives = 181/353 (51%), Gaps = 3/353 (0%)

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAI-ALLDEMSVSGCEPDV 222
           R  R E A      ++ +G   D I  + ++ G C+  +   A+  LL      GC PDV
Sbjct: 89  RAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDILLHRTPELGCVPDV 148

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKG--CPPYLITYTILIEQVCKQCGIARAIEVL 280
            +YN +L+++ + GK  QA    +     G  C P ++ Y  +I+   K+  + +A ++ 
Sbjct: 149 FSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACDLF 208

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
            +M   G  PD+VTYNS+V+  CK    D A   +  ++++ + PN+ TYN L++   S 
Sbjct: 209 KEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYSST 268

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G W    ++   M   S  P V T ++L+  LCKYG +  A + F+ M  K   PD+ +Y
Sbjct: 269 GQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVFSY 328

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N +L     +G L +   L  L+ G   +P   T+N  I   A  G ++KAM+++ +M +
Sbjct: 329 NIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEMRD 388

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +G+ PD +T+RT+I   CR  ++++A++   ++  +G      AY  +I G C
Sbjct: 389 HGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFC 441



 Score =  166 bits (421), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 100/371 (26%), Positives = 184/371 (49%), Gaps = 3/371 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P + TY +++    +  +   A+A   ++  +G   D I  + +L+   +  +  +A+  
Sbjct: 75  PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 134

Query: 245 WKDQLRK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNF 301
              +  + GC P + +Y IL++ +C Q    +A  +L  MA  G  CSPD+V YN++++ 
Sbjct: 135 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDG 194

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
             K+G  + A  +   ++ RG+ P+ +TYN+++H+L      D  +  L  M      P 
Sbjct: 195 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 254

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            +TYN LI G    G    A+  F +M   +  PD+VT + ++G+LCK G + EA  +  
Sbjct: 255 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 314

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +     +P + +YN +++G A KGC+     L+  M+ +GI+PD  T    I  +    
Sbjct: 315 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCG 374

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            +++A+ +  E+   G K     YR VI  LC+  K+D A++    MI     PD   ++
Sbjct: 375 MLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYN 434

Query: 542 TIVKKVADDGM 552
            +++     G+
Sbjct: 435 CLIQGFCTHGI 445



 Score =  162 bits (410), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 101/382 (26%), Positives = 175/382 (45%), Gaps = 39/382 (10%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTD-ASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           + GP V +       IL + C+R    + A      + R     D     +L++G     
Sbjct: 67  AQGPRVLSPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAK 126

Query: 167 RIEKASKVLQIMVMS-GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG--CEPDVI 223
           R ++A  +L       G VPD  +YN+++  LC +G+   A  LL  M+  G  C PDV+
Sbjct: 127 RTDEALDILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVV 186

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA------- 276
            YNT++   F  G   +A   +K+ +++G PP L+TY  ++  +CK   + +A       
Sbjct: 187 AYNTVIDGFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQM 246

Query: 277 ----------------------------IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
                                       + V  +M      PD+VT + L+   CK GK 
Sbjct: 247 VNKRVLPNNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKI 306

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            +A  V + +  +G  P+  +YN +L+   ++GC   +  + D+M     +P  +T+N+ 
Sbjct: 307 KEARDVFDTMAMKGQNPDVFSYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQ 366

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I      G++D+A+  FN+M     +PD+VTY TV+ ALC+ G +++A++  + +     
Sbjct: 367 IKAYANCGMLDKAMIIFNEMRDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGV 426

Query: 429 SPCLITYNTLIDGLAKKGCMEK 450
           +P    YN LI G    G + K
Sbjct: 427 APDKYAYNCLIQGFCTHGILLK 448



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 94/318 (29%), Positives = 157/318 (49%), Gaps = 11/318 (3%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI--PDFHFCINLIRGLIRIDRIEKASK 173
           D  + N +L++ C++GK   A  L+ +MA    +  PD      +I G  +   + KA  
Sbjct: 147 DVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDGFFKEGDVNKACD 206

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + MV  G  PD +TYN +V  LCK   +  A A L +M      P+  TYN ++    
Sbjct: 207 LFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPNNWTYNNLIYGYS 266

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G++K+A+  +K+  R    P ++T ++L+  +CK   I  A +V D MA++G +PD+ 
Sbjct: 267 STGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFDTMAMKGQNPDVF 326

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN ++N    +G   D   + + +L  G+ P+  T+N  + +  + G  D    I + M
Sbjct: 327 SYNIMLNGYATKGCLVDMTDLFDLMLGDGIAPDFYTFNVQIKAYANCGMLDKAMIIFNEM 386

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P V TY  +I  LC+ G +D A+  FNQM+ +   PD   YN ++   C  G+L
Sbjct: 387 RDHGVKPDVVTYRTVIAALCRIGKMDDAMEKFNQMIDQGVAPDKYAYNCLIQGFCTHGIL 446

Query: 414 ---------NEALQLLHL 422
                    N  +  LHL
Sbjct: 447 LKTQGIDFGNNEIMALHL 464



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 89/318 (27%), Positives = 160/318 (50%), Gaps = 5/318 (1%)

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV-L 313
           P   TY IL++   +      A+     +   G   D +  + L+   C+  + D+A+ +
Sbjct: 75  PTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALDI 134

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH--SPTVFTYNILING 371
           +++     G  P+  +YN LL SL ++G     D +L +M E     SP V  YN +I+G
Sbjct: 135 LLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVIDG 194

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
             K G V++A + F +MV +   PD+VTYN+V+ ALCK   +++A   L  +      P 
Sbjct: 195 FFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLPN 254

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
             TYN LI G +  G  ++A+ ++ +M  + I PD +T   L+   C+  +++EA D+  
Sbjct: 255 NWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTLSMLMGSLCKYGKIKEARDVFD 314

Query: 492 EIGKRGNKMRNSAYRLVIHGLC-KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            +  +G      +Y ++++G   K   VDM   + +LM+     PD   F+  +K  A+ 
Sbjct: 315 TMAMKGQNPDVFSYNIMLNGYATKGCLVDMT-DLFDLMLGDGIAPDFYTFNVQIKAYANC 373

Query: 551 GMTEEAYKLWQKLIEWKV 568
           GM ++A  ++ ++ +  V
Sbjct: 374 GMLDKAMIIFNEMRDHGV 391



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 63/220 (28%), Positives = 110/220 (50%), Gaps = 3/220 (1%)

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           SPT +TY IL++   +    + A+  F Q++    + D +  + +L   C+    +EAL 
Sbjct: 74  SPTSYTYAILMDCCTRAHRPELALAFFGQLLRTGLRVDAIIASHLLKGFCEAKRTDEALD 133

Query: 419 -LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI--SPDDITHRTLIW 475
            LLH      C P + +YN L+  L  +G   +A  L   M E G   SPD + + T+I 
Sbjct: 134 ILLHRTPELGCVPDVFSYNILLKSLCNQGKSGQADNLLRMMAEGGTVCSPDVVAYNTVID 193

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GF +   V +A DL KE+ +RG       Y  V+H LCK++ +D A   L  M++ R  P
Sbjct: 194 GFFKEGDVNKACDLFKEMVQRGIPPDLVTYNSVVHALCKARAMDKAEAFLRQMVNKRVLP 253

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           ++  ++ ++   +  G  +EA ++++++    +     TL
Sbjct: 254 NNWTYNNLIYGYSSTGQWKEAVRVFKEMRRHSILPDVVTL 293


>gi|356558657|ref|XP_003547620.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g55840-like [Glycine max]
          Length = 1078

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 129/503 (25%), Positives = 240/503 (47%), Gaps = 17/503 (3%)

Query: 80  SESHVLAVNKKLRGLTITKKSHDPSLP----SSDGPFVENDEKTNNK-----ILQNFCSR 130
           + +H+L V  ++     T   H   LP    S  G  +E     N+      +L   C R
Sbjct: 59  TTTHIL-VRARMYNFAKTTLKHLLQLPIGLNSVFGALMETYPICNSNPAVFDLLIRVCLR 117

Query: 131 GKLT-DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
            ++  DA +   +M  R   P  + C  ++  L++  +++      + M+  G  PD  T
Sbjct: 118 NRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSLVKEQKVDMFWSFFKGMLAKGICPDVAT 177

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           +N+++  LC+RG+ ++A  LL +M  SG  P  +TYNT+L      G++K A        
Sbjct: 178 FNILLNALCERGKFKNAGFLLRKMEESGVYPTAVTYNTLLNWYCKKGRYKAASQLIDCMA 237

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            KG    + TY + I+ +C+    A+   +L  M      P+ +TYN+L++   ++GK +
Sbjct: 238 SKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRMRRNMVYPNEITYNTLISGFVREGKIE 297

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A  V + +    + PNSITYNTL+    + G      +++D+M      P   TY  L+
Sbjct: 298 VATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALL 357

Query: 370 NGLCK---YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           NGL K   +G+V   +    +M     +   ++Y  ++  LCK GML EA+QLL  +   
Sbjct: 358 NGLYKNAEFGMVSSIL---ERMRMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKV 414

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           S +P ++T++ LI+G  + G +  A  +  +M + G+ P+ I + TLI+ +C+   ++EA
Sbjct: 415 SVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEA 474

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           ++    +   G+   +    +++   C+  K++ A   +  M      P+   F  I+  
Sbjct: 475 LNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIING 534

Query: 547 VADDGMTEEAYKLWQKLIEWKVF 569
             + G   +A+ ++ K+  +  F
Sbjct: 535 YGNSGDALKAFSVFDKMNSFGHF 557



 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 125/492 (25%), Positives = 217/492 (44%), Gaps = 48/492 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C+ G + +A +L+D+M      P+      L+ GL +       S +L+ M
Sbjct: 317 TYNTLIAGHCTTGNIGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERM 376

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            M G     I+Y  M+ GLCK G +  A+ LLD+M      PDV+T++ ++   F  GK 
Sbjct: 377 RMGGVRVSHISYTAMIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKI 436

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A        + G  P  I Y+ LI   CK   +  A+     M   G   D  T N L
Sbjct: 437 NNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVL 496

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V   C+ GK ++A   +N++   G++PNS+T++ +++  G+ G       + D MN   H
Sbjct: 497 VATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGH 556

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSF--------------------------------- 385
            P++FTY  L+ GLC  G ++ A+  F                                 
Sbjct: 557 FPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIA 616

Query: 386 --NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS-----CSPCLITYNTL 438
             N+MV+ +  PD  TY  ++  LCK+G +  AL    LL+G +      SP    Y +L
Sbjct: 617 LINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAAL----LLSGKAIEKGLLSPNPAVYTSL 672

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +DGL K G    A+ ++ +M+   + PD +    +I  + R  +  +  D+L  +  +  
Sbjct: 673 VDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTMKSKNL 732

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
               + Y +++HG  K   +     + + MI   + PD   + +++          +++ 
Sbjct: 733 CFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQS----KSFD 788

Query: 559 LWQKLIEWKVFE 570
           +  K++ W   E
Sbjct: 789 VAIKILRWITLE 800



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 130/508 (25%), Positives = 221/508 (43%), Gaps = 71/508 (13%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L  +C +G+   AS+LID MA +    D       I  L R  R  K   +L+ M
Sbjct: 212 TYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKRM 271

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT----------- 227
             +   P+ ITYN ++ G  + G+I  A  + DEMS+    P+ ITYNT           
Sbjct: 272 RRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGNI 331

Query: 228 ------------------------ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                                   +L  ++ N +F       +     G     I+YT +
Sbjct: 332 GEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTAM 391

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+ +CK   +  A+++LDDM     +PD+VT++ L+N   + GK ++A  ++  +   G+
Sbjct: 392 IDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGL 451

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD---- 379
            PN I Y+TL+++    G          +MN + H    FT N+L+   C+YG ++    
Sbjct: 452 VPNGILYSTLIYNYCKMGYLKEALNAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEY 511

Query: 380 -------------------------------RAINSFNQMVSKNCQPDIVTYNTVLGALC 408
                                          +A + F++M S    P + TY  +L  LC
Sbjct: 512 FMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLC 571

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
             G +NEAL+  H L     +   + +NT +    + G +  A+ L  +M+ N   PD+ 
Sbjct: 572 IGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNF 631

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSKKVDMAIQVLEL 527
           T+  LI G C+  ++  A+ L  +  ++G    N A Y  ++ GL K      A+ + E 
Sbjct: 632 TYTNLIAGLCKKGKIVAALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEE 691

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEE 555
           M++   +PD   F+ I+ + +  G T +
Sbjct: 692 MLNKDVEPDTVAFNVIIDQYSRKGKTSK 719



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 107/456 (23%), Positives = 221/456 (48%), Gaps = 5/456 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T + ++  F   GK+ +A +++  M +   +P+      LI    ++  +++A 
Sbjct: 416 VNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTGLVPNGILYSTLIYNYCKMGYLKEAL 475

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
               +M  SG V D  T N++V   C+ G++  A   ++ MS  G +P+ +T++ I+   
Sbjct: 476 NAYAVMNHSGHVADHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGY 535

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            ++G   +A   +      G  P L TY  L++ +C    I  A++    +     + D 
Sbjct: 536 GNSGDALKAFSVFDKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDN 595

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL-- 350
           V +N+ +  +C+ G   DA+ +IN +++    P++ TY  L+  L  +G    V  +L  
Sbjct: 596 VIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKG--KIVAALLLS 653

Query: 351 -DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              + +   SP    Y  L++GL K+G    A+  F +M++K+ +PD V +N ++    +
Sbjct: 654 GKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSR 713

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
           +G  ++   +L  +   +    L TYN L+ G AK+  M +  +LY  M+ +G  PD  +
Sbjct: 714 KGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFS 773

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
             +LI G+C++   + A+ +L+ I   G+ +    + ++I   C+  ++  A ++++ M 
Sbjct: 774 WHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMN 833

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                P+   ++ +   +       +A+++ Q L+E
Sbjct: 834 QFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLE 869



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/462 (24%), Positives = 204/462 (44%), Gaps = 3/462 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  FC  GKL +A   ++ M+R    P+      +I G        KA  V 
Sbjct: 489 DHFTCNVLVATFCRYGKLEEAEYFMNHMSRMGLDPNSVTFDCIINGYGNSGDALKAFSVF 548

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P   TY  ++ GLC  G I  A+     +       D + +NT L +   +
Sbjct: 549 DKMNSFGHFPSLFTYGGLLKGLCIGGHINEALKFFHRLRCIPNAVDNVIFNTKLTSTCRS 608

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIV 293
           G    AI    + +     P   TYT LI  +CK+  I  A+ +L   AIE    SP+  
Sbjct: 609 GNLSDAIALINEMVTNDFLPDNFTYTNLIAGLCKKGKIVAAL-LLSGKAIEKGLLSPNPA 667

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y SLV+   K G    A+ +   +L++ +EP+++ +N ++     +G    V+ IL  M
Sbjct: 668 VYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVIIDQYSRKGKTSKVNDILSTM 727

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
              +    + TYNIL++G  K   + R    +  M+     PD  ++++++   C+    
Sbjct: 728 KSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGFLPDKFSWHSLILGYCQSKSF 787

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           + A+++L  +          T+N LI    ++  M+KA  L  QM +  + P+  T+  L
Sbjct: 788 DVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFELVKQMNQFMVIPNVDTYNAL 847

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
             G  R     +A  +L+ + + G+   N  Y  +I+G+C+   +  A+++ + M +   
Sbjct: 848 FNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMCRVGNIKGAMKLQDEMKTLGI 907

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
              +   S IV+ +A+    E A  +   ++E ++     T 
Sbjct: 908 SSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVATF 949



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 114/455 (25%), Positives = 199/455 (43%), Gaps = 13/455 (2%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D    N  L + C  G L+DA  LI+ M   + +PD     NLI GL       K  K++
Sbjct: 594  DNVIFNTKLTSTCRSGNLSDAIALINEMVTNDFLPDNFTYTNLIAGLC------KKGKIV 647

Query: 176  QIMVMSGGV-------PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTI 228
              +++SG         P+   Y  +V GL K G  R+A+ + +EM     EPD + +N I
Sbjct: 648  AALLLSGKAIEKGLLSPNPAVYTSLVDGLLKHGHARAALYIFEEMLNKDVEPDTVAFNVI 707

Query: 229  LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
            +      GK  +          K     L TY IL+    K+  +AR   +  DM   G 
Sbjct: 708  IDQYSRKGKTSKVNDILSTMKSKNLCFNLATYNILLHGYAKRHAMARCFMLYKDMIRHGF 767

Query: 289  SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             PD  +++SL+   C+   +D A+ ++  +   G   +  T+N L+     R       +
Sbjct: 768  LPDKFSWHSLILGYCQSKSFDVAIKILRWITLEGHVIDRFTFNMLITKFCERNEMKKAFE 827

Query: 349  ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
            ++  MN+    P V TYN L NGL +     +A      ++     P    Y T++  +C
Sbjct: 828  LVKQMNQFMVIPNVDTYNALFNGLIRTSDFHKAHRVLQVLLESGSVPTNKQYITLINGMC 887

Query: 409  KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
            + G +  A++L   +     S   +  + ++ GLA    +E A+ +   M+E  I P   
Sbjct: 888  RVGNIKGAMKLQDEMKTLGISSHNVAMSAIVRGLANSKKIENAIWVLDLMLEMQIIPTVA 947

Query: 469  THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
            T  TL+  +C+   V +A++L   +     K+   AY ++I GLC +  ++ A ++ E M
Sbjct: 948  TFTTLMHVYCKEANVAKALELRSIMEHCHVKLDVVAYNVLISGLCANGDIEAAFKLYEEM 1007

Query: 529  ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
                  P+ +++  ++          E+ KL + +
Sbjct: 1008 KQRDLWPNTSIYIVLIDSFCAGNYQIESEKLLRDI 1042



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 89/365 (24%), Positives = 177/365 (48%), Gaps = 2/365 (0%)

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
           AL++   +    P V  ++ ++R    N     A+  +     +G  P + T  +++  +
Sbjct: 93  ALMETYPICNSNPAV--FDLLIRVCLRNRMVGDAVQTFYLMGFRGLNPSVYTCNMVLGSL 150

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
            K+  +         M  +G  PD+ T+N L+N  C++GK+ +A  ++  +   G+ P +
Sbjct: 151 VKEQKVDMFWSFFKGMLAKGICPDVATFNILLNALCERGKFKNAGFLLRKMEESGVYPTA 210

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           +TYNTLL+    +G + A  +++D M        V TYN+ I+ LC+     +      +
Sbjct: 211 VTYNTLLNWYCKKGRYKAASQLIDCMASKGIGVDVCTYNVFIDNLCRDSRSAKGYLLLKR 270

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M      P+ +TYNT++    +EG +  A ++   ++  +  P  ITYNTLI G    G 
Sbjct: 271 MRRNMVYPNEITYNTLISGFVREGKIEVATKVFDEMSLFNLLPNSITYNTLIAGHCTTGN 330

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           + +A+ L   M+ +G+ P+++T+  L+ G  +  +      +L+ +   G ++ + +Y  
Sbjct: 331 IGEALRLMDVMVSHGLRPNEVTYGALLNGLYKNAEFGMVSSILERMRMGGVRVSHISYTA 390

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +I GLCK+  ++ A+Q+L+ M+     PD   FS ++      G    A ++  K+ +  
Sbjct: 391 MIDGLCKNGMLEEAVQLLDDMLKVSVNPDVVTFSVLINGFFRVGKINNAKEIMCKMYKTG 450

Query: 568 VFEKG 572
           +   G
Sbjct: 451 LVPNG 455


>gi|356528294|ref|XP_003532739.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g12700, mitochondrial-like [Glycine max]
          Length = 594

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 120/444 (27%), Positives = 216/444 (48%), Gaps = 4/444 (0%)

Query: 124 LQNFCSRGKLTDASKLIDI---MARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           ++N C  GK+ +  + +D+   MA    +P       L+  ++R+     A  +++ +  
Sbjct: 45  MRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVKHIFS 104

Query: 181 SGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           S G+  DTIT N+++  LC+   +    ++L  M   G EP V+T   ++  +   G   
Sbjct: 105 SLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVA 164

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           QA+G      +   P  + TY +LI  +CK      A+E L  M      P++V Y++++
Sbjct: 165 QAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIM 224

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK G   +A+ + + +  +G+ PN +TY  L+  L + G W     +LD M +    
Sbjct: 225 DGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMR 284

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             + T NIL++  CK G V +A +    M+     PD+ TYN+++   C +  +NEA+++
Sbjct: 285 LDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRV 344

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
            HL+    C P ++ + +LI G  K   + K M L  +M + G  PD +T  TLI GFC+
Sbjct: 345 FHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQ 404

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A +   A +L   + K G         +++ GLCK   +  A+ + E M  S    +  +
Sbjct: 405 AGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVI 464

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           +S ++  +   G    A++L+  L
Sbjct: 465 YSILLDGMCSAGKLNAAWELFSSL 488



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/418 (27%), Positives = 205/418 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++   C +G +  A  L+D M +     D +    LI GL +      A + L+ M
Sbjct: 149 TLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKM 208

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P+ + Y+ ++ GLCK G +  A+ L  EMS  G  P+++TY  +++ + + G++
Sbjct: 209 EERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRW 268

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+      + ++ G    L T  IL++  CK+  + +A  V+  M + G  PD+ TYNSL
Sbjct: 269 KETGSLLDEMIKMGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSL 328

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C Q K ++A+ V + ++SRG  P+ + + +L+H        + V  +L+ M +   
Sbjct: 329 IHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGF 388

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P V T+  LI G C+ G    A   F  M      P++ T   +L  LCK  +L+EA+ 
Sbjct: 389 VPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVS 448

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +  S+    ++ Y+ L+DG+   G +  A  L+  +   G+  +  T+  +I G C
Sbjct: 449 LAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLC 508

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +   +++A DLL  + + G    N  Y + + GL   K++  +I+ L +M    +  D
Sbjct: 509 KQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSIKYLTIMRDKGFSVD 566



 Score =  161 bits (408), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 111/433 (25%), Positives = 201/433 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T N ++   C    +     ++  M +    P       LI GL     + +A 
Sbjct: 108 IEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQGNVAQAV 167

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M       D  TY +++ GLCK G   +A+  L +M     +P+V+ Y+TI+  +
Sbjct: 168 GLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGL 227

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G   +A+    +   KG  P L+TY  LI+ +C          +LD+M   G   D+
Sbjct: 228 CKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDL 287

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            T N LV+  CK+GK   A  VI  ++  G  P+  TYN+L+H    +   +   ++  +
Sbjct: 288 QTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHL 347

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M      P +  +  LI+G CK   +++ ++   +M      PD+VT+ T++G  C+ G 
Sbjct: 348 MVSRGCLPDIVVFTSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGR 407

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
              A +L   ++     P L T   ++DGL K   + +A+ L   M ++ +  + + +  
Sbjct: 408 PLAAKELFLNMHKYGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSI 467

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C A ++  A +L   +  +G ++    Y ++I GLCK   +D A  +L  M  + 
Sbjct: 468 LLDGMCSAGKLNAAWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENG 527

Query: 533 YKPDDTVFSTIVK 545
             PD+  ++  V+
Sbjct: 528 CLPDNCTYNVFVQ 540



 Score =  158 bits (400), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 107/397 (26%), Positives = 179/397 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C  G    A + +  M  RN  P+      ++ GL +   + +A  + 
Sbjct: 181 DVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVYSTIMDGLCKDGLVSEALNLC 240

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ +TY  ++ GLC  G+ +   +LLDEM   G   D+ T N ++      
Sbjct: 241 SEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIKMGMRLDLQTLNILVDAFCKE 300

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  QA       +  G  P + TY  LI   C Q  +  A+ V   M   GC PDIV +
Sbjct: 301 GKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVF 360

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            SL++  CK    +  + ++  +   G  P+ +T+ TL+      G   A  ++   M++
Sbjct: 361 TSLIHGWCKDKNINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHK 420

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P + T  ++++GLCK  L+  A++    M   N   +IV Y+ +L  +C  G LN 
Sbjct: 421 YGQVPNLQTCAVILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNA 480

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +L   L G      + TY  +I GL K+G ++KA  L   M ENG  PD+ T+   + 
Sbjct: 481 AWELFSSLPGKGLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQ 540

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
           G     ++  ++  L  +  +G  +  +   + I+ L
Sbjct: 541 GLLTKKEIARSIKYLTIMRDKGFSVDAATTEITINYL 577



 Score =  115 bits (289), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 79/310 (25%), Positives = 145/310 (46%), Gaps = 4/310 (1%)

Query: 260 YTILIEQVCKQC---GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           + I +  +CK      I  A+++   MA     P +  +  L+    +   Y  A+ ++ 
Sbjct: 41  FLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVRLKHYTTAISLVK 100

Query: 317 NLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
           ++ S  G+E ++IT N +++ L           +L  M +    PTV T   LINGLC  
Sbjct: 101 HIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVMTLTALINGLCVQ 160

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G V +A+   + M       D+ TY  ++  LCK G    A++ L  +   +  P ++ Y
Sbjct: 161 GNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKMEERNWKPNVVVY 220

Query: 436 NTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
           +T++DGL K G + +A+ L  +M   G+ P+ +T+  LI G C   + +E   LL E+ K
Sbjct: 221 STIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRWKETGSLLDEMIK 280

Query: 496 RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEE 555
            G ++      +++   CK  KV  A  V+  MI +   PD   +++++          E
Sbjct: 281 MGMRLDLQTLNILVDAFCKEGKVMQAKSVIGFMILTGEGPDVFTYNSLIHIYCLQNKMNE 340

Query: 556 AYKLWQKLIE 565
           A +++  ++ 
Sbjct: 341 AMRVFHLMVS 350



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 101/228 (44%), Gaps = 39/228 (17%)

Query: 107 SSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID 166
           + +GP    D  T N ++  +C + K+ +A ++  +M  R  +PD     +LI G  +  
Sbjct: 316 TGEGP----DVFTYNSLIHIYCLQNKMNEAMRVFHLMVSRGCLPDIVVFTSLIHGWCKDK 371

Query: 167 RIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ------------------------ 202
            I K   +L+ M   G VPD +T+  ++GG C+ G+                        
Sbjct: 372 NINKVMHLLEEMAKMGFVPDVVTWTTLIGGFCQAGRPLAAKELFLNMHKYGQVPNLQTCA 431

Query: 203 -----------IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
                      +  A++L + M  S  + +++ Y+ +L  M   GK   A   +     K
Sbjct: 432 VILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGK 491

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           G    + TYTI+I+ +CKQ  + +A ++L +M   GC PD  TYN  V
Sbjct: 492 GLQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFV 539



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 58/252 (23%), Positives = 112/252 (44%), Gaps = 15/252 (5%)

Query: 329 TYNTLLHSLGSR-----------GCWDAVDKILDI---MNEASHSPTVFTYNILINGLCK 374
           TY+T  HS G++           G    +D+ LD+   M      P+V  + +L+  + +
Sbjct: 29  TYDTDSHSNGTQFLISMRNLCKSGKVKNIDEALDLFQGMASMKPLPSVKDFTLLLGVIVR 88

Query: 375 YGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
                 AI+    + S    + D +T N V+  LC+  ++     +L  +      P ++
Sbjct: 89  LKHYTTAISLVKHIFSSLGIEADTITLNIVINCLCRLKLVAFGFSVLGTMFKLGLEPTVM 148

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           T   LI+GL  +G + +A+ L   M +     D  T+  LI G C+      AV+ L+++
Sbjct: 149 TLTALINGLCVQGNVAQAVGLVDHMEKMRYPLDVYTYGVLINGLCKTGDTLAAVEWLRKM 208

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
            +R  K     Y  ++ GLCK   V  A+ +   M     +P+   ++ +++ + + G  
Sbjct: 209 EERNWKPNVVVYSTIMDGLCKDGLVSEALNLCSEMSGKGVRPNLVTYACLIQGLCNFGRW 268

Query: 554 EEAYKLWQKLIE 565
           +E   L  ++I+
Sbjct: 269 KETGSLLDEMIK 280



 Score = 52.4 bits (124), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 40/158 (25%), Positives = 66/158 (41%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           IL   C    L++A  L + M + N   +      L+ G+    ++  A ++   +   G
Sbjct: 433 ILDGLCKGNLLSEAVSLAEAMEKSNLDLNIVIYSILLDGMCSAGKLNAAWELFSSLPGKG 492

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +  TY +M+ GLCK+G +  A  LL  M  +GC PD  TYN  ++ +    +  ++I
Sbjct: 493 LQINVYTYTIMIKGLCKQGSLDKAEDLLINMEENGCLPDNCTYNVFVQGLLTKKEIARSI 552

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
            +      KG      T  I I  +    G  R  E  
Sbjct: 553 KYLTIMRDKGFSVDAATTEITINYLSTNEGDTRIREFF 590


>gi|218185204|gb|EEC67631.1| hypothetical protein OsI_35025 [Oryza sativa Indica Group]
          Length = 800

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 104/367 (28%), Positives = 182/367 (49%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N++L+    + +  DA KL D M   +   D +    L+RGL    R+E+  K+++    
Sbjct: 383 NRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWG 442

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G +P  + YN+++ G C+RG +   + LL EM   G  P ++TY +++  +   G  ++
Sbjct: 443 AGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEK 502

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               + +  ++G  P +  Y  +I+ +CK     +A+ +L  M   GC PDI+T+N+L+ 
Sbjct: 503 IGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLIT 562

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C +G    A   +   + R + PN ++Y  L+H    RG   A   +L  M    H+P
Sbjct: 563 GLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTP 622

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V T+  LI+GL   G V  A+    +M  +   PD+  YN ++  LCK+ ML  A  +L
Sbjct: 623 DVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNIL 682

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +   +  P    Y TLIDG  +   +  A  ++  M   G+ PD ++   +I G+C+ 
Sbjct: 683 EEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQF 742

Query: 481 DQVEEAV 487
             + EA+
Sbjct: 743 GMMSEAI 749



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 97/371 (26%), Positives = 183/371 (49%), Gaps = 1/371 (0%)

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMF 233
           LQ M ++G  P       +V      G +  A  + + +    G  P+V   N +L+ + 
Sbjct: 331 LQSMSLAGAAPTRACLGALVAAYADAGMLGKATDMCERLREQYGSLPEVTHCNRLLKLLV 390

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +  ++  A   + + L +       +  +L+  +C +  +   +++++     GC P +V
Sbjct: 391 EQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVV 450

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            YN L++  C++G     +L++  + ++G  P  +TY +L++ LG +G  + +  +   M
Sbjct: 451 FYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEM 510

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +   SP V  YN +I+ LCK     +A+    QM +  C PDI+T+NT++  LC EG +
Sbjct: 511 RKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPDIITFNTLITGLCHEGHV 570

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
            +A   L        +P  ++Y  LI G   +G +  A  L  +MM  G +PD +T   L
Sbjct: 571 RKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGAL 630

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G   A +V EA+ + +++ +R      + Y ++I GLCK   +  A  +LE M+    
Sbjct: 631 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNV 690

Query: 534 KPDDTVFSTIV 544
           +PD+ V++T++
Sbjct: 691 QPDEFVYATLI 701



 Score =  159 bits (403), Expect = 3e-36,   Method: Compositional matrix adjust.
 Identities = 98/377 (25%), Positives = 183/377 (48%), Gaps = 4/377 (1%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G +P+    N ++  L ++ +   A  L DEM       D  +   ++R +   G+ ++ 
Sbjct: 374 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEG 433

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +   + +   GC P+++ Y +LI+  C++  + R + +L +M  +G  P +VTY SL+N 
Sbjct: 434 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINC 493

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK--ILDIMNEASHS 359
             K+G  +    +   +  RG+ PN   YN+++ +L    CW A     IL  M  +   
Sbjct: 494 LGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCK--CWSATQAMVILKQMFASGCD 551

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P + T+N LI GLC  G V +A +   + + +   P+ ++Y  ++   C  G L  A  L
Sbjct: 552 PDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDL 611

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  + G   +P ++T+  LI GL   G + +A+++  +M E  + PD   +  LI G C+
Sbjct: 612 LMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCK 671

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
              +  A ++L+E+ ++  +     Y  +I G  +S+ +  A ++ E M     +PD   
Sbjct: 672 KHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVS 731

Query: 540 FSTIVKKVADDGMTEEA 556
            + ++K     GM  EA
Sbjct: 732 CNAMIKGYCQFGMMSEA 748



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/392 (25%), Positives = 186/392 (47%), Gaps = 2/392 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           GK TD  +   +  +   +P+   C  L++ L+   R + A K+   M+      D  + 
Sbjct: 360 GKATDMCE--RLREQYGSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYST 417

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
            ++V GLC  G++   + L++    +GC P V+ YN ++      G   + +    +   
Sbjct: 418 CVLVRGLCLEGRVEEGLKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEA 477

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           KG  P L+TY  LI  + K+  + +   +  +M   G SP++  YNS+++  CK      
Sbjct: 478 KGFLPTLVTYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQ 537

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A++++  + + G +P+ IT+NTL+  L   G     +  L        +P   +Y  LI+
Sbjct: 538 AMVILKQMFASGCDPDIITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIH 597

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
           G C  G +  A +   +M+ +   PD+VT+  ++  L   G ++EAL +   +      P
Sbjct: 598 GFCMRGELMAASDLLMEMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVFP 657

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
            +  YN LI GL KK  +  A  +  +M+E  + PD+  + TLI GF R++ + +A  + 
Sbjct: 658 DVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 717

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           + +  +G +    +   +I G C+   +  AI
Sbjct: 718 EFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAI 749



 Score =  125 bits (314), Expect = 6e-26,   Method: Compositional matrix adjust.
 Identities = 81/283 (28%), Positives = 135/283 (47%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G  P++   N L+    +Q ++DDA  + + +L      ++ +   L+  L   G  +  
Sbjct: 374 GSLPEVTHCNRLLKLLVEQRRWDDARKLYDEMLGEDSGADNYSTCVLVRGLCLEGRVEEG 433

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
            K+++    A   P V  YN+LI+G C+ G + R +    +M +K   P +VTY +++  
Sbjct: 434 LKLIEARWGAGCIPHVVFYNVLIDGYCRRGDMGRGLLLLGEMEAKGFLPTLVTYGSLINC 493

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
           L K+G L +   L   +     SP +  YN++ID L K     +AMV+  QM  +G  PD
Sbjct: 494 LGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQMFASGCDPD 553

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            IT  TLI G C    V +A   L+E  +R       +Y  +IHG C   ++  A  +L 
Sbjct: 554 IITFNTLITGLCHEGHVRKAEHFLREAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLM 613

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            M+   + PD   F  ++  +   G   EA  + +K+ E +VF
Sbjct: 614 EMMGRGHTPDVVTFGALIHGLVVAGKVSEALIVREKMTERQVF 656



 Score =  108 bits (271), Expect = 7e-21,   Method: Compositional matrix adjust.
 Identities = 77/299 (25%), Positives = 130/299 (43%), Gaps = 35/299 (11%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   ++     +G L     L   M +R   P+     ++I  L +     +A  +L+ M
Sbjct: 486 TYGSLINCLGKKGDLEKIGSLFLEMRKRGLSPNVQIYNSVIDALCKCWSATQAMVILKQM 545

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             SG  PD IT+N ++ GLC  G +R A   L                            
Sbjct: 546 FASGCDPDIITFNTLITGLCHEGHVRKAEHFL---------------------------- 577

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
                  ++ +R+   P  ++YT LI   C +  +  A ++L +M   G +PD+VT+ +L
Sbjct: 578 -------REAIRRELNPNQLSYTPLIHGFCMRGELMAASDLLMEMMGRGHTPDVVTFGAL 630

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++     GK  +A++V   +  R + P+   YN L+  L  +    A   IL+ M E + 
Sbjct: 631 IHGLVVAGKVSEALIVREKMTERQVFPDVNIYNVLISGLCKKHMLPAAKNILEEMLEKNV 690

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            P  F Y  LI+G  +   +  A   F  M  K  +PDIV+ N ++   C+ GM++EA+
Sbjct: 691 QPDEFVYATLIDGFIRSENLGDARKIFEFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAI 749



 Score = 52.0 bits (123), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 28/98 (28%), Positives = 45/98 (45%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D    N ++   C +  L  A  +++ M  +N  PD      LI G IR + +  A K+ 
Sbjct: 658 DVNIYNVLISGLCKKHMLPAAKNILEEMLEKNVQPDEFVYATLIDGFIRSENLGDARKIF 717

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
           + M   G  PD ++ N M+ G C+ G +  AI  +  M
Sbjct: 718 EFMEHKGVRPDIVSCNAMIKGYCQFGMMSEAILCMSNM 755


>gi|449463537|ref|XP_004149490.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At2g02150-like [Cucumis sativus]
          Length = 786

 Score =  190 bits (483), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 126/447 (28%), Positives = 212/447 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G L ++ +L   M      PD     +LI G  ++  +E+ + +   M
Sbjct: 291 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 350

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VPD ITYN ++   CK  ++  A     EM  +G +P+V+TY+T++      G  
Sbjct: 351 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 410

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + AI  + D  R G  P   TYT LI+  CK   +  A ++L+DM   G   +IVTY +L
Sbjct: 411 QGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 470

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G+  +A  V  ++L  G+ PN   Y  L+H        +   KIL  M E + 
Sbjct: 471 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 530

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +  Y  +I G C    ++       +M S+    + V   T++ A  K G  ++AL 
Sbjct: 531 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALN 590

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               +        ++TY  LIDGL K G +E A+  + +M+  G+ P+   + +LI G C
Sbjct: 591 FFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 650

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           + + +E A  L  E+  RG     +A+  +I G  K   +  A+ ++  M     + D  
Sbjct: 651 KNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 710

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
           V++++V   +  G   +A K + ++IE
Sbjct: 711 VYTSLVSGFSQCGELHQARKFFNEMIE 737



 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 115/437 (26%), Positives = 213/437 (48%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           F   G L +A++    M     +P    C  L+  L +    +   K    M+ +G  P 
Sbjct: 229 FVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPS 288

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TYN+M+  LCK G + ++  L  +M   G  PDV+TYN+++      G  ++    + 
Sbjct: 289 VFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFN 348

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           +    GC P +ITY  LI   CK   + RA E   +M   G  P++VTY++L++  CK+G
Sbjct: 349 EMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEG 408

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
               A+ +  ++   G+ PN  TY +L+ +    G      K+L+ M +A     + TY 
Sbjct: 409 MMQGAIKLFVDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYT 468

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L++GLCK G +  A   F  M+     P+   Y  ++    K   + +A+++L  +   
Sbjct: 469 ALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTEC 528

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           +  P LI Y ++I G   +  +E+  ++  +M   GIS + +   T+I  + +A +  +A
Sbjct: 529 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 588

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           ++  +E+   G +     Y ++I GLCK+  V++A+     M+S   +P+  V+++++  
Sbjct: 589 LNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 648

Query: 547 VADDGMTEEAYKLWQKL 563
           +  +   E A KL+ ++
Sbjct: 649 LCKNNCIESAKKLFDEM 665



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 139/276 (50%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P   + N L++   K G         N+++  G+ P+  TYN ++  L   G  +   ++
Sbjct: 252 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 311

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M E   SP V TYN LI+G  K G ++   + FN+M    C PDI+TYN ++   CK
Sbjct: 312 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 371

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              +  A +    +  +   P ++TY+TLID   K+G M+ A+ L+  M   G+ P++ T
Sbjct: 372 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLFVDMRRTGLLPNEFT 431

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +LI   C+A  + EA  LL ++ + G K+    Y  ++ GLCK+ ++  A +V   M+
Sbjct: 432 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 491

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                P+  V++ +V         E+A K+ +++ E
Sbjct: 492 KDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 527



 Score = 97.8 bits (242), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 76/336 (22%), Positives = 136/336 (40%), Gaps = 70/336 (20%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +L   C  G++ +A ++   M +    P+      L+ G I+ +R+E A K+L+ M
Sbjct: 466 TYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQM 525

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 PD I Y  ++ G C + ++     +L+EM   G   + +   TI+   F  GK 
Sbjct: 526 TECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKS 585

Query: 239 KQAIGFWKDQ-----------------------------------LRKGCPPYLITYTIL 263
             A+ F+++                                    L  G  P +  YT L
Sbjct: 586 SDALNFFQEMQDVGVEATIVTYCVLIDGLCKAGIVELAVDYFCRMLSLGLQPNVAVYTSL 645

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+ +CK   I  A ++ D+M   G +PDI  + +L++ + K G   +A+++I+ +    +
Sbjct: 646 IDGLCKNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAI 705

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
           E +       LH                             Y  L++G  + G + +A  
Sbjct: 706 EFD-------LH----------------------------VYTSLVSGFSQCGELHQARK 730

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
            FN+M+ K   P+ V    +L    K G L+EA++L
Sbjct: 731 FFNEMIEKGILPEEVLCICLLREYYKRGQLDEAIEL 766



 Score = 93.6 bits (231), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 56/197 (28%), Positives = 101/197 (51%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
            +++L +   + GL++ A   F++M +    P   + N +L  L K G      +  + +
Sbjct: 221 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 280

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
            G+  +P + TYN +ID L K+G +E +  L+ QM E G+SPD +T+ +LI G+ +   +
Sbjct: 281 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 340

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           EE   L  E+   G       Y  +I+  CK +K+  A +    M ++  KP+   +ST+
Sbjct: 341 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 400

Query: 544 VKKVADDGMTEEAYKLW 560
           +     +GM + A KL+
Sbjct: 401 IDAFCKEGMMQGAIKLF 417


>gi|125538899|gb|EAY85294.1| hypothetical protein OsI_06665 [Oryza sativa Indica Group]
          Length = 632

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/427 (29%), Positives = 215/427 (50%), Gaps = 3/427 (0%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGL 197
              I AR+ Q P      ++I  LI   + EK  ++   M   G   PDT+TY+ ++   
Sbjct: 182 FYQIKARKCQ-PTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSALISAF 240

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           CK G+  SAI LL+EM  +G +P    Y  I+   F       A+  +++     C P +
Sbjct: 241 CKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDV 300

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            TYT LI  + K   I  A     +M  EGC PD V  N+++NF  K G+ DD + +   
Sbjct: 301 FTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKLFEE 360

Query: 318 LLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
           +      PN +TYNT++ +L  S+     V    + M  +  SP+ FTY+ILI+G CK  
Sbjct: 361 MGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTN 420

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            +++A+    +M  K   P    Y +++ AL K    + A +L   L  +  S     Y 
Sbjct: 421 RIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYA 480

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            +I  L K G ++ A+ L+ +M + G +P+   +  L+ G  RA  ++EA+  ++++ + 
Sbjct: 481 VMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEH 540

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G     ++Y ++++GL K+     A+++L  M +S  KPD   ++T++  ++  GM EEA
Sbjct: 541 GCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEA 600

Query: 557 YKLWQKL 563
            +L +++
Sbjct: 601 AELMKEM 607



 Score =  184 bits (467), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 104/334 (31%), Positives = 174/334 (52%), Gaps = 1/334 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD      LIRGL +  RI++A      M   G  PDT+  N M+  L K G++   + L
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGLKL 357

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGCPPYLITYTILIEQVC 268
            +EM VS C P+V+TYNTI++ +F++      +  W ++++  G  P   TY+ILI+  C
Sbjct: 358 FEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFC 417

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   I +A+ +L++M  +G  P    Y SL++   K  +YD A  +   L       ++ 
Sbjct: 418 KTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSAR 477

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            Y  ++  LG  G  D    + D M++   +P V+ YN L++GL +  ++D A+ +  +M
Sbjct: 478 VYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKM 537

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
               C PDI +YN +L  L K G  + A+++L  +  S+  P  ++YNT++  L+  G  
Sbjct: 538 QEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMF 597

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           E+A  L  +M   G   D IT+ +++    + DQ
Sbjct: 598 EEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631



 Score =  182 bits (461), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 105/418 (25%), Positives = 197/418 (47%), Gaps = 1/418 (0%)

Query: 98  KKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN 157
           +K H+     S+    + D  T + ++  FC  G+   A +L++ M      P       
Sbjct: 211 EKVHELYNEMSNEGHCQPDTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTM 270

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           +I    ++D +  A  + + M      PD  TY  ++ GL K G+I  A     EM   G
Sbjct: 271 IISLFFKLDNVHGALSLFEEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREG 330

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK-QCGIARA 276
           C+PD +  N ++  +   G+    +  +++     C P ++TY  +I+ + + +  ++  
Sbjct: 331 CKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEV 390

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
               + M   G SP   TY+ L++  CK  + + A++++  +  +G  P    Y +L+ +
Sbjct: 391 FSWFERMKGSGISPSPFTYSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDA 450

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           LG    +D   ++   + E   S +   Y ++I  L K G +D AIN F++M    C P+
Sbjct: 451 LGKAKRYDLACELFQELKENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPN 510

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +  YN ++  L +  ML+EAL  +  +    C P + +YN +++GLAK G   +AM +  
Sbjct: 511 VYAYNALMSGLARACMLDEALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLT 570

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            M  + I PD +++ T++     A   EEA +L+KE+   G +     Y  ++  + K
Sbjct: 571 NMKNSTIKPDAVSYNTVLSALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628



 Score =  148 bits (374), Expect = 7e-33,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 192/424 (45%), Gaps = 3/424 (0%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG-GVPDTITYNMMVGGLCKRGQI 203
           +RN   D    + LI  L  +++  +  K++Q MV S   V   +  + ++  L     I
Sbjct: 116 KRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMI 175

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG-CPPYLITYTI 262
             AI +  ++    C+P    YN+++  +   G++++    + +   +G C P  +TY+ 
Sbjct: 176 GKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCQPDTVTYSA 235

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI   CK      AI +L++M   G  P    Y  +++   K      A+ +   +    
Sbjct: 236 LISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMY 295

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             P+  TY  L+  LG  G  D        M      P     N +IN L K G +D  +
Sbjct: 296 CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREGCKPDTVVMNNMINFLGKAGRLDDGL 355

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
             F +M   +C P++VTYNT++ AL + +  ++E       + GS  SP   TY+ LIDG
Sbjct: 356 KLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDG 415

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K   +EKAM+L  +M E G  P    + +LI    +A + + A +L +E+ +      
Sbjct: 416 FCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 475

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y ++I  L K+ ++D AI + + M      P+   ++ ++  +A   M +EA    +
Sbjct: 476 ARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMR 535

Query: 562 KLIE 565
           K+ E
Sbjct: 536 KMQE 539


>gi|449460167|ref|XP_004147817.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g19290-like [Cucumis sativus]
          Length = 942

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 127/478 (26%), Positives = 226/478 (47%), Gaps = 35/478 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           IL+ F  +G    A  + D M +  ++P    C +L+  L++     KA  V + M+  G
Sbjct: 192 ILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALG 251

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PD  +Y +MV   CK G++  A   + EM  S CEP+V+TYN+++      G    A 
Sbjct: 252 ILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAK 311

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                   KG P    TYT+LI+  CK+  + +A +++  M  +    D   Y  L++  
Sbjct: 312 KVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAY 371

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G+ DDA+ + + +L  G++ N++  N+L++     G  +   ++L  M + +  P  
Sbjct: 372 CTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDS 431

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
           + YN L++G CK     +A    ++M +K     +VTYNT+L  L   G +  AL + +L
Sbjct: 432 YGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNL 491

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG-------------------------- 456
           ++    +P  +TY TL+D   K G  ++AM+++                           
Sbjct: 492 MHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEK 551

Query: 457 ---------QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
                    +M E G  PD+IT+RTLI G+C+   + EA+ L     + G       Y  
Sbjct: 552 LVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNS 611

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +I G+ +S+++     +L  M +    P+   + +++    D GM ++AY  + K+I+
Sbjct: 612 LITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMID 669



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 129/522 (24%), Positives = 219/522 (41%), Gaps = 74/522 (14%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE     ++  +C+ G++ DA ++ D M +     +   C +LI G  ++  + KA++VL
Sbjct: 360 DEHVYGVLIHAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVL 419

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M      PD+  YN ++ G CK+     A  L DEM   G    V+TYNT+L+ +F  
Sbjct: 420 VSMKDWNLKPDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHV 479

Query: 236 GK-----------------------------------FKQAIGFWKDQLRKGCPPYLITY 260
           G                                    F +A+  WKD L KG    +  Y
Sbjct: 480 GHVEHALHIWNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLY 539

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
             +I   CK   + +A E+   M   G  PD +TY +L++  CK G   +A+ + +    
Sbjct: 540 NTMICGFCKMEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSER 599

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G+  ++  YN+L+  +        ++ +L  M     SP V TY  LI G C  G++D+
Sbjct: 600 DGISSSTEMYNSLITGVFRSEELQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDK 659

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL-------- 432
           A N++ +M+ K   P+I+  + ++ +L + G ++EA  +LH +  +   P          
Sbjct: 660 AYNAYFKMIDKGIAPNIIIGSKIVSSLYRHGKIDEANLILHQI--ADIDPIAAHAHSVEL 717

Query: 433 -----------------------------ITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
                                        I YN  I GL K   ++    +   ++  G 
Sbjct: 718 PKSDLRHLETQKIVDSFGKKAMSIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGF 777

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD+ T+ +LI       +V EA  L  ++   G       Y  +I+GLCKS  +D A +
Sbjct: 778 CPDNYTYCSLIHACSAVGKVNEAFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARR 837

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +   +      P    ++T++      G T EA +L  K+ E
Sbjct: 838 LFNKLARKGLSPTVVTYNTLIDGYCKGGRTTEALELKDKMRE 879



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 119/487 (24%), Positives = 212/487 (43%), Gaps = 35/487 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  + +T   +++ +C RG++  A KLI  M  +N   D H    LI       R++ A 
Sbjct: 322 IPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDAL 381

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   M+  G   +T+  N ++ G CK G +  A  +L  M     +PD   YNT+L   
Sbjct: 382 RIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGF 441

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                F +A     +   KG    ++TY  L++ +     +  A+ + + M   G +P+ 
Sbjct: 442 CKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNE 501

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY +L++   K G +D A+++  + LS+G   +   YNT++             +I   
Sbjct: 502 VTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLK 561

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E    P   TY  LI+G CK G +  A+   +             YN+++  + +   
Sbjct: 562 MKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEE 621

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L +   LL  +     SP ++TY +LI G   KG M+KA   Y +M++ GI+P+ I    
Sbjct: 622 LQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSK 681

Query: 473 LIWGFCRADQVEEAVDLLKEI--------------------------------GKRGNKM 500
           ++    R  +++EA  +L +I                                GK+   +
Sbjct: 682 IVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSI 741

Query: 501 ---RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
               N  Y + I GLCKSK +D   ++L  ++   + PD+  + +++   +  G   EA+
Sbjct: 742 PISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAF 801

Query: 558 KLWQKLI 564
            L   +I
Sbjct: 802 CLRDDMI 808



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 119/434 (27%), Positives = 195/434 (44%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C  G++ +A   +  M R    P+     +LI G + +  +  A KVL +M   G
Sbjct: 262 MVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVLALMSEKG 321

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              ++ TY +++ G CKRGQ+  A  L+  M       D   Y  ++      G+   A+
Sbjct: 322 IPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIHAYCTAGRVDDAL 381

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                 L+ G     +    LI   CK   + +A EVL  M      PD   YN+L++  
Sbjct: 382 RIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLKPDSYGYNTLLDGF 441

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CKQ  +  A  + + + ++G+    +TYNTLL +L   G  +    I ++M++   +P  
Sbjct: 442 CKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHIWNLMHKRGVAPNE 501

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY  L++   K G  DRA+  +   +SK     I  YNT++   CK   L +A ++   
Sbjct: 502 VTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCKMEKLVQAQEIFLK 561

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +      P  ITY TLIDG  K G + +A+ L      +GIS     + +LI G  R+++
Sbjct: 562 MKELGFPPDEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEE 621

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +++   LL E+  R        Y  +I G C    +D A      MI     P+  + S 
Sbjct: 622 LQKLNGLLAEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSK 681

Query: 543 IVKKVADDGMTEEA 556
           IV  +   G  +EA
Sbjct: 682 IVSSLYRHGKIDEA 695



 Score =  154 bits (390), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/465 (23%), Positives = 208/465 (44%), Gaps = 35/465 (7%)

Query: 130 RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT 189
           R  ++   K++ I++R     +    +N +  L + + I  A     + V          
Sbjct: 129 RPDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTV 188

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           ++M++    ++G  + A+ + D M   G  P + + N++L  +  NG+  +A+  ++  +
Sbjct: 189 FDMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMI 248

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN--------- 300
             G  P + +YTI++   CK+  +  A   + +M    C P++VTYNSL++         
Sbjct: 249 ALGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVC 308

Query: 301 --------------------------FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
                                       CK+G+ + A  +I  ++ + +  +   Y  L+
Sbjct: 309 GAKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLI 368

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
           H+  + G  D   +I D M +          N LING CK G V++A      M   N +
Sbjct: 369 HAYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNLK 428

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           PD   YNT+L   CK+    +A +L   ++    +  ++TYNTL+  L   G +E A+ +
Sbjct: 429 PDSYGYNTLLDGFCKQEDFIKAFKLCDEMHNKGVNFTVVTYNTLLKNLFHVGHVEHALHI 488

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           +  M + G++P+++T+ TL+  F +    + A+ + K+   +G     + Y  +I G CK
Sbjct: 489 WNLMHKRGVAPNEVTYCTLLDAFFKVGTFDRAMMIWKDALSKGFTKSITLYNTMICGFCK 548

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
            +K+  A ++   M    + PD+  + T++      G   EA KL
Sbjct: 549 MEKLVQAQEIFLKMKELGFPPDEITYRTLIDGYCKVGNLVEALKL 593



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 100/348 (28%), Positives = 170/348 (48%), Gaps = 2/348 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T   ++  +C  G L +A KL D+  R           +LI G+ R + ++K + +L
Sbjct: 570 DEITYRTLIDGYCKVGNLVEALKLKDMSERDGISSSTEMYNSLITGVFRSEELQKLNGLL 629

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M      P+ +TY  ++ G C +G +  A     +M   G  P++I  + I+ +++ +
Sbjct: 630 AEMKNRELSPNVVTYGSLIAGWCDKGMMDKAYNAYFKMIDKGIAPNIIIGSKIVSSLYRH 689

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTI-LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           GK  +A      Q+    P     +++ L +   +     + ++     A+     + + 
Sbjct: 690 GKIDEA-NLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAMSIPISNNIV 748

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN  +   CK    DD   ++++LL +G  P++ TY +L+H+  + G  +    + D M 
Sbjct: 749 YNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNEAFCLRDDMI 808

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            A   P +  YN LINGLCK G +DRA   FN++  K   P +VTYNT++   CK G   
Sbjct: 809 NAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLIDGYCKGGRTT 868

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           EAL+L   +      P  ITY+TLI GL  +G  E+++ L  +MM+ G
Sbjct: 869 EALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAG 916



 Score =  109 bits (272), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 68/298 (22%), Positives = 139/298 (46%), Gaps = 19/298 (6%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLL-------------------SRGMEPNSITY 330
           PD+ +Y  +V+   +   Y +  + +N L+                    R    +   +
Sbjct: 130 PDVSSYCKIVHILSRARMYKEVRVYLNELVVLCKNNYIASAVWDELVSVYREFSFSPTVF 189

Query: 331 NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS 390
           + +L     +G       + D M +    P++ + N L++ L + G   +A+  + QM++
Sbjct: 190 DMILKVFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIA 249

Query: 391 KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK 450
               PDI +Y  ++ A CKEG ++EA   +  +  S C P ++TYN+LIDG    G +  
Sbjct: 250 LGILPDIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCG 309

Query: 451 AMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
           A  +   M E GI  +  T+  LI G+C+  Q+E+A  L+  + ++   +    Y ++IH
Sbjct: 310 AKKVLALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLFVDEHVYGVLIH 369

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             C + +VD A+++ + M+    K +  + ++++      G   +A ++   + +W +
Sbjct: 370 AYCTAGRVDDALRIRDAMLKVGLKMNTVICNSLINGYCKLGHVNKAAEVLVSMKDWNL 427



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 67/242 (27%), Positives = 121/242 (50%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           +KI+ +    GK+ +A+ ++  +A  + I      + L +  +R    +K         M
Sbjct: 680 SKIVSSLYRHGKIDEANLILHQIADIDPIAAHAHSVELPKSDLRHLETQKIVDSFGKKAM 739

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           S  + + I YN+ + GLCK   I     +L ++ + G  PD  TY +++      GK  +
Sbjct: 740 SIPISNNIVYNIAITGLCKSKNIDDVRRILSDLLLKGFCPDNYTYCSLIHACSAVGKVNE 799

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     D +  G  P ++ Y  LI  +CK   + RA  + + +A +G SP +VTYN+L++
Sbjct: 800 AFCLRDDMINAGLVPNIVVYNALINGLCKSGNLDRARRLFNKLARKGLSPTVVTYNTLID 859

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+  +A+ + + +   G+ P+SITY+TL+H L   G  +    +L+ M +A    
Sbjct: 860 GYCKGGRTTEALELKDKMREEGICPSSITYSTLIHGLYMEGKSEQSVGLLNEMMKAGKGS 919

Query: 361 TV 362
           +V
Sbjct: 920 SV 921



 Score = 69.3 bits (168), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 55/224 (24%), Positives = 105/224 (46%), Gaps = 4/224 (1%)

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS--KNCQPDIVTYNTVLG 405
           KI+ I++ A     V  Y   +  LCK   +  A+  ++++VS  +        ++ +L 
Sbjct: 137 KIVHILSRARMYKEVRVYLNELVVLCKNNYIASAV--WDELVSVYREFSFSPTVFDMILK 194

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
              ++GM   AL +   +      P L + N+L+  L + G   KA+++Y QM+  GI P
Sbjct: 195 VFAEKGMTKFALCVFDNMGKCGRVPSLRSCNSLLSNLVQNGEAFKALLVYEQMIALGILP 254

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D  ++  ++  +C+  +V+EA + +KE+ +   +     Y  +I G      V  A +VL
Sbjct: 255 DIFSYTIMVNAYCKEGRVDEAFNFVKEMERSCCEPNVVTYNSLIDGYVSLGDVCGAKKVL 314

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            LM       +   ++ ++K     G  E+A KL   ++E  +F
Sbjct: 315 ALMSEKGIPENSRTYTLLIKGYCKRGQMEQAEKLIGCMMEKNLF 358


>gi|125569916|gb|EAZ11431.1| hypothetical protein OsJ_01299 [Oryza sativa Japonica Group]
          Length = 563

 Score =  190 bits (482), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 123/451 (27%), Positives = 214/451 (47%), Gaps = 9/451 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID----RIEKASKVLQIM 178
           ++  F   G+L +A+ ++  M R + +P    C+     ++R+         A KV   M
Sbjct: 9   MVAAFGEAGRLPEAADMVLEM-RSHGLP---LCVETANWVLRVGLETGSFVYARKVFDGM 64

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  P    +  +V   C+ G++    ALL  M   G   D  T   ++R++ + G+F
Sbjct: 65  TRAGVSPMNRGFGALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRF 124

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K    F++  L  G PP ++ YT  I+ +CK+  + +A  VL++M   G  P++ T+ +L
Sbjct: 125 KDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 184

Query: 299 VNFSCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++  CK G  + A  +   L+ S   +PN  TY  ++      G     + +L  M E  
Sbjct: 185 IDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG 244

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TY  LI G CK G  DRA    N+M  +   P+I TYN V+   CK+G + EA 
Sbjct: 245 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 304

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++L +          ITY  LI    K+G +  A+ L+ +M+ENG  PD   + +LI  +
Sbjct: 305 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 364

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+  Q+EE+     +    G       Y  +I G CK  +  +A++V E M+ +    D 
Sbjct: 365 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTLALRVFERMVQNGCFADS 424

Query: 538 TVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +  ++  +  +   EEA  L++ +++ ++
Sbjct: 425 ITYGALISGLCKESRLEEAKALYEGMLDKRL 455



 Score =  171 bits (434), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 120/449 (26%), Positives = 207/449 (46%), Gaps = 4/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++++ C +G+  D S+    M      P+       I GL +   +++A  VL
Sbjct: 107 DNATCTVVVRSLCEKGRFKDVSEFFRRMLETGTPPNVVNYTAWIDGLCKRRYVKQAFHVL 166

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL-LDEMSVSGCEPDVITYNTILRTMFD 234
           + MV  G  P+  T+  ++ GLCK G    A  L L  +  S  +P+V TY  ++     
Sbjct: 167 EEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCR 226

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK  +A       + +G  P   TYT LI   CK     RA E+++ M  EG  P+I T
Sbjct: 227 EGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYT 286

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN++++  CK+GK  +A  V+    S+G++ + ITY  L+     +G       + D M 
Sbjct: 287 YNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMV 346

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E    P +  Y  LI+  C+   ++ +   F++ +     P   TY +++   CK G   
Sbjct: 347 ENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRST 406

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            AL++   +  + C    ITY  LI GL K+  +E+A  LY  M++  + P ++T  TL 
Sbjct: 407 LALRVFERMVQNGCFADSITYGALISGLCKESRLEEAKALYEGMLDKRLVPCEVTRVTLT 466

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
           + +CR ++   AV +L  + KR    +     +V+  L     VD A   L+ ++   Y 
Sbjct: 467 FEYCRREKTSIAVSVLDRLDKR---QQVHTVDVVVRKLSALGDVDAASLFLKKVLDEDYA 523

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            D   ++  +    ++     A ++ +K 
Sbjct: 524 VDHATYTGFINSCYENNRYALASEMSEKF 552


>gi|297802850|ref|XP_002869309.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297315145|gb|EFH45568.1| hypothetical protein ARALYDRAFT_491552 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 1114

 Score =  189 bits (481), Expect = 2e-45,   Method: Compositional matrix adjust.
 Identities = 125/462 (27%), Positives = 216/462 (46%), Gaps = 39/462 (8%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           K ++ +  +  +  F  CI   R L R  +I +A ++L+ M   G  PD +TY +++  L
Sbjct: 249 KEMETLGLKPNVYTFTICI---RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 305

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C   ++  A  +  +M     +PD +TY T+L    DN        FW +  + G  P +
Sbjct: 306 CTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFWSEMEKDGHVPDV 365

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +T+TIL++ +CK      A   LD M  +G  P++ TYN+L+    +  + DDA+ + +N
Sbjct: 366 VTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALEIFDN 425

Query: 318 LLSRGMEPNSITY-----------------------------------NTLLHSLGSRGC 342
           + S G++P + TY                                   N  L+SL   G 
Sbjct: 426 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 485

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                +I   + +    P   TYN+++    K G +D AI   ++MV   C+PD++  N+
Sbjct: 486 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVENCCEPDVIVVNS 545

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  L K   ++EA ++   +      P ++TYNTL+ GL K G +++A+ L+  M++ G
Sbjct: 546 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 605

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             P+ IT  TL    C+ D+V  A+ +L ++   G       Y  +I GL K+ +V  A+
Sbjct: 606 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 665

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                M    Y PD     T++  V   G+ E+AYK+    +
Sbjct: 666 CFFHQMKKLVY-PDFVTLCTLLPGVVKAGLIEDAYKIIANFL 706



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 115/380 (30%), Positives = 178/380 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C+  KL  A ++   M      PD    I L+        ++  ++  
Sbjct: 294 DVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYITLLDRFSDNRDLDSVNQFW 353

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G VPD +T+ ++V  LCK G    A A LD M   G  P++ TYNT++  +   
Sbjct: 354 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQGILPNLHTYNTLICGLLRV 413

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +   A+  + +    G  P   TY + I+   K      A+E  + M  +G +P+IV  
Sbjct: 414 HRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 473

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+ +    K G+  +A  +   L   G+ P+S+TYN ++      G  D   K+L  M E
Sbjct: 474 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMVE 533

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V   N LIN L K   VD A   F +M     +P +VTYNT+L  L K G + E
Sbjct: 534 NCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 593

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A++L   +    C P  IT+NTL D L K   +  A+ +  +MM+ G  PD  T+ T+I+
Sbjct: 594 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 653

Query: 476 GFCRADQVEEAVDLLKEIGK 495
           G  +  QV+EA+    ++ K
Sbjct: 654 GLVKNGQVKEAMCFFHQMKK 673



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 126/463 (27%), Positives = 229/463 (49%), Gaps = 19/463 (4%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D    N ++       ++ +A K+   M      P       L+ GL +  +I++A +
Sbjct: 537 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 596

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + MV  G  P+TIT+N +   LCK  ++  A+ +L +M   GC PDV TYNTI+  + 
Sbjct: 597 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 656

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS--PD 291
            NG+ K+A+ F+  Q++K   P  +T   L+  V K   I  A +++ +  +  C+  P 
Sbjct: 657 KNGQVKEAMCFFH-QMKKLVYPDFVTLCTLLPGVVKAGLIEDAYKIIANF-LYSCADQPA 714

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM--EPNSITYNTLLHSL------GSRGCW 343
            + +  L+     +   D+AV     L++ G+  + +SI    + +S       G+R  +
Sbjct: 715 NLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSFKHNNASGARMLF 774

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           +   K L +       P + TYN+LI GL +  +++ A + F Q+ +  C PD+ TYN +
Sbjct: 775 EKFTKDLGV------QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDVATYNFL 828

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM-ENG 462
           L A  K G ++E  ++   ++   C P  IT+N +I GL K G ++ A+ LY  +M +  
Sbjct: 829 LDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 888

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
            SP   T+  LI G  ++ ++ EA  L + +   G +   + Y ++I+G  K+ + D A 
Sbjct: 889 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAGEADAAC 948

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            + + M+    +PD   +S +V  +   G  +E    +++L E
Sbjct: 949 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKE 991



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 219/476 (46%), Gaps = 11/476 (2%)

Query: 104 SLPSSDGPF-----------VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF 152
           S P +D  F           + +  +T N +L+     GK+ + + + D+M +R    D 
Sbjct: 96  SFPDTDSSFSYFKSVAGNSNLVHTTETCNYMLEALRVDGKIEEMAYVFDLMQKRIIKRDT 155

Query: 153 HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
           +  + + + L     + +A   L+ M   G V +  +YN ++  L K      A+ +   
Sbjct: 156 NTYLTIFKCLSVKGGLRQAPFALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 215

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           M + G  P + TY++++  +      +  +G  K+    G  P + T+TI I  + +   
Sbjct: 216 MILDGFRPSLQTYSSLMVGLGKRRDIESVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 275

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           I  A E+L  M  EGC PD+VTY  L++  C   K D A  V   + +   +P+ +TY T
Sbjct: 276 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFAKMKTGRHKPDRVTYIT 335

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           LL         D+V++    M +  H P V T+ IL++ LCK G    A    + M  + 
Sbjct: 336 LLDRFSDNRDLDSVNQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFAKLDVMRDQG 395

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             P++ TYNT++  L +   L++AL++   +      P   TY   ID   K G    A+
Sbjct: 396 ILPNLHTYNTLICGLLRVHRLDDALEIFDNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 455

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
             + +M   GI+P+ +     ++   +A +  EA  +   +   G    +  Y +++   
Sbjct: 456 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 515

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            K  ++D AI++L  M+ +  +PD  V ++++  +      +EA+K++ ++ E K+
Sbjct: 516 SKVGEIDEAIKLLSEMVENCCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 571



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 121/468 (25%), Positives = 215/468 (45%), Gaps = 41/468 (8%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T N I+      G++ +A      M ++   PDF     L+ G+++   IE A K++
Sbjct: 644  DVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKAGLIEDAYKII 702

Query: 176  QIMVMS--------------------GGVPDTITYN--MMVGGLCKRGQ------IR--- 204
               + S                     G+ + ++++  ++  G+C+ G       IR   
Sbjct: 703  ANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSF 762

Query: 205  ------SAIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
                   A  L ++ +   G +P + TYN ++  + +    + A   +      GC P +
Sbjct: 763  KHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKNTGCIPDV 822

Query: 258  ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
             TY  L++   K   I    E+  +M+   C P+ +T+N +++   K G  DDA+ +  +
Sbjct: 823  ATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDDALDLYYD 882

Query: 318  LLS-RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            L+S R   P + TY  L+  L   G      ++ + M++    P    YNILING  K G
Sbjct: 883  LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILINGFGKAG 942

Query: 377  LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
              D A   F +MV +  +PD+ TY+ ++  LC  G ++E L     L  S  +P ++ YN
Sbjct: 943  EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDVVCYN 1002

Query: 437  TLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
             +I+GL K   +E+A+VL+ +M ++ GI+PD  T+ +LI     A  VEEA  +  EI +
Sbjct: 1003 LIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1062

Query: 496  RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
             G +     +  +I G   S K + A  V + M++  + P+   +  +
Sbjct: 1063 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 127/485 (26%), Positives = 215/485 (44%), Gaps = 41/485 (8%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N +L      GK+ +A +L + M ++   P+      L   L + D +  A K+L  M
Sbjct: 577  TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 636

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +  G VPD  TYN ++ GL K GQ++ A+    +M      PD +T  T+L  +   G  
Sbjct: 637  MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKAGLI 695

Query: 239  KQAIGFWKDQLRKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG---------- 287
            + A     + L      P  + +  L+  +  + GI  A+   + +   G          
Sbjct: 696  EDAYKIIANFLYSCADQPANLFWEDLMGSILAEAGIDNAVSFSERLVANGICRDGDSILV 755

Query: 288  ---------------------------CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
                                         P + TYN L+    +    + A  V   + +
Sbjct: 756  PIIRYSFKHNNASGARMLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKN 815

Query: 321  RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
             G  P+  TYN LL + G  G  D + +I   M+     P   T+NI+I+GL K G VD 
Sbjct: 816  TGCIPDVATYNFLLDAYGKSGKIDELFEIYKEMSAHECEPNTITHNIVISGLVKAGNVDD 875

Query: 381  AINSFNQMVS-KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A++ +  ++S ++  P   TY  ++  L K G L EA QL   ++   C P    YN LI
Sbjct: 876  ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMSDYGCRPNCAIYNILI 935

Query: 440  DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
            +G  K G  + A  L+ +M++ G+ PD  T+  L+   C   +V+E +   +E+ + G  
Sbjct: 936  NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLN 995

Query: 500  MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR-YKPDDTVFSTIVKKVADDGMTEEAYK 558
                 Y L+I+GL K  +++ A+ +   M  SR   PD   +++++  +   GM EEA K
Sbjct: 996  PDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGK 1055

Query: 559  LWQKL 563
            ++ ++
Sbjct: 1056 IYNEI 1060



 Score =  100 bits (249), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 68/259 (26%), Positives = 122/259 (47%), Gaps = 2/259 (0%)

Query: 114  ENDEKTNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            E +  T+N ++      G + DA  L  D+M+ R+  P       LI GL +  R+ +A 
Sbjct: 854  EPNTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 913

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++ + M   G  P+   YN+++ G  K G+  +A AL   M   G  PD+ TY+ ++  +
Sbjct: 914  QLFEGMSDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 973

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA-IEGCSPD 291
               G+  + + ++++    G  P ++ Y ++I  + K   +  A+ + ++M    G +PD
Sbjct: 974  CMVGRVDEGLHYFRELKESGLNPDVVCYNLIINGLGKFHRLEEALVLFNEMKKSRGITPD 1033

Query: 292  IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            + TYNSL+      G  ++A  + N +   G+EPN  T+N L+      G  +    +  
Sbjct: 1034 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1093

Query: 352  IMNEASHSPTVFTYNILIN 370
             M     SP   TY  L N
Sbjct: 1094 TMVTGGFSPNTGTYEQLPN 1112



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 3/153 (1%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI-RGLIRIDRIEKA 171
            V  D KT + ++   C  G++ +       +      PD   C NLI  GL +  R+E+A
Sbjct: 959  VRPDLKTYSVLVDCLCMVGRVDEGLHYFRELKESGLNPDV-VCYNLIINGLGKFHRLEEA 1017

Query: 172  SKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
              +   M  S G+ PD  TYN ++  L   G +  A  + +E+  +G EP+V T+N ++R
Sbjct: 1018 LVLFNEMKKSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1077

Query: 231  TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                +GK + A   ++  +  G  P   TY  L
Sbjct: 1078 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1110


>gi|356520989|ref|XP_003529141.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g09060-like [Glycine max]
          Length = 682

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 124/479 (25%), Positives = 226/479 (47%), Gaps = 33/479 (6%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N +L  F    +   A             P+      L++ + +    EK   +L  
Sbjct: 114 RSFNTLLNAFVESHQWARAENFFKYFEAARVSPNVETYNVLMKVMCKKGEFEKGRGLLTW 173

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M  +G  PD ITY  ++GG+ K G +  A+ + DEM   G EPDV+ YN I+   F  G 
Sbjct: 174 MWGAGMSPDRITYGTLIGGVAKSGDLGFALEVFDEMRERGVEPDVVCYNMIIDGFFKRGD 233

Query: 238 FKQAIGFWKDQLRKGCP-PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           F +A   W+  LR+    P +++Y ++I  +CK    +  +E+ + M       D+ TY+
Sbjct: 234 FVKAGEMWERLLREELVFPSVVSYNVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYS 293

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           +L++   + G    A  V   ++ RG+ P+ +T N +L+ L   G  +   ++ + M + 
Sbjct: 294 ALIHGLSEAGDLGGARKVYEEMVGRGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKC 353

Query: 357 S----HSPTVF--------------------------TYNILINGLCKYGLVDRAINSFN 386
           S     S  +F                          TY ++++GLC  G V+RA+    
Sbjct: 354 SLRNVRSYNIFLKGLFENGKVDDAMMLWDGLLEADSATYGVVVHGLCWNGYVNRALQVLE 413

Query: 387 QMVSKNCQPDI--VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           +   +    D+    Y++++ ALCKEG L+EA  ++ L+N   C       N LIDG  K
Sbjct: 414 EAEHREGGMDVDEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVK 473

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
              ++ A+ ++ +M   G S   +++  LI G  RA++  EA D + E+ ++G K     
Sbjct: 474 HSKLDSAVKVFREMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIIT 533

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           Y  +I GL +S  +D A+++    + + +KPD  +++ ++ ++   G  E+A +L+  L
Sbjct: 534 YSTLIGGLYESNMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTL 592



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 124/429 (28%), Positives = 208/429 (48%), Gaps = 8/429 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G+ ++  ++ + M +  +  D      LI GL     +  A KV + MV 
Sbjct: 258 NVMISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVG 317

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +T N M+ GLCK G +     L +EM       +V +YN  L+ +F+NGK   
Sbjct: 318 RGVRPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLR-NVRSYNIFLKGLFENGKVDD 376

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE--GCSPDIVTYNSL 298
           A+  W   L         TY +++  +C    + RA++VL++      G   D   Y+SL
Sbjct: 377 AMMLWDGLLEADSA----TYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSL 432

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK+G+ D+A  V+  +  RG + NS   N L+         D+  K+   M+    
Sbjct: 433 INALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREMSGKGC 492

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           S TV +YNILINGL +      A +  N+M+ K  +PDI+TY+T++G L +  M++ AL+
Sbjct: 493 SLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYESNMMDAALR 552

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L H    +   P +I YN +I  L   G +E A+ LY  + +     + +TH T++ GF 
Sbjct: 553 LWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTHNTIMEGFY 611

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +    E A  +   I +   +    +Y + + GLC   +V  A+  L+  +   + P   
Sbjct: 612 KVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALVRGFLPTAI 671

Query: 539 VFSTIVKKV 547
            ++ +V+ V
Sbjct: 672 TWNILVRAV 680



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 111/412 (26%), Positives = 195/412 (47%), Gaps = 9/412 (2%)

Query: 156 INLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMS 214
           + L++   +     +A  V Q M    G   TI ++N ++    +  Q   A        
Sbjct: 81  LTLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFE 140

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
            +   P+V TYN +++ M   G+F++  G        G  P  ITY  LI  V K   + 
Sbjct: 141 AARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLG 200

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME-PNSITYNTL 333
            A+EV D+M   G  PD+V YN +++   K+G +  A  +   LL   +  P+ ++YN +
Sbjct: 201 FALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLLREELVFPSVVSYNVM 260

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L   G +    +I + M +      +FTY+ LI+GL + G +  A   + +MV +  
Sbjct: 261 ISGLCKCGRFSEGLEIWERMKKNERKCDLFTYSALIHGLSEAGDLGGARKVYEEMVGRGV 320

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
           +PD+VT N +L  LCK G + E  +L   +   S    + +YN  + GL + G ++ AM+
Sbjct: 321 RPDVVTCNAMLNGLCKAGNVEECFELWEEMGKCSLRN-VRSYNIFLKGLFENGKVDDAMM 379

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR--GNKMRNSAYRLVIHG 511
           L+  ++E     D  T+  ++ G C    V  A+ +L+E   R  G  +   AY  +I+ 
Sbjct: 380 LWDGLLE----ADSATYGVVVHGLCWNGYVNRALQVLEEAEHREGGMDVDEFAYSSLINA 435

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           LCK  ++D A  V+ELM     K +  V + ++         + A K+++++
Sbjct: 436 LCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVFREM 487



 Score =  116 bits (291), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 70/258 (27%), Positives = 135/258 (52%), Gaps = 3/258 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE   + ++   C  G+L +A  ++++M +R    + H C  LI G ++  +++ A KV 
Sbjct: 425 DEFAYSSLINALCKEGRLDEADGVVELMNKRGCKFNSHVCNVLIDGFVKHSKLDSAVKVF 484

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M   G     ++YN+++ GL +  + R A   ++EM   G +PD+ITY+T++  ++++
Sbjct: 485 REMSGKGCSLTVVSYNILINGLLRAERFREAYDCVNEMLEKGWKPDIITYSTLIGGLYES 544

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                A+  W   L  G  P +I Y I+I ++C    +  A+++   +  + C  ++VT+
Sbjct: 545 NMMDAALRLWHQFLDTGHKPDIIMYNIVIHRLCSSGKVEDALQLYSTLRQKKCV-NLVTH 603

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMN 354
           N+++    K G  + A  +  ++L   ++P+ I+YN  L  L S G   DAV  + D + 
Sbjct: 604 NTIMEGFYKVGNCEMASKIWAHILEDELQPDIISYNITLKGLCSCGRVTDAVGFLDDALV 663

Query: 355 EASHSPTVFTYNILINGL 372
                PT  T+NIL+  +
Sbjct: 664 RG-FLPTAITWNILVRAV 680



 Score = 61.2 bits (147), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 40/164 (24%), Positives = 76/164 (46%), Gaps = 1/164 (0%)

Query: 402 TVLGALCKEGMLNEALQLLHLL-NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           T+L A  K  M NEAL +   + +   CSP + ++NTL++   +     +A   +     
Sbjct: 82  TLLKAYAKTRMPNEALHVFQTMPHVFGCSPTIRSFNTLLNAFVESHQWARAENFFKYFEA 141

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
             +SP+  T+  L+   C+  + E+   LL  +   G       Y  +I G+ KS  +  
Sbjct: 142 ARVSPNVETYNVLMKVMCKKGEFEKGRGLLTWMWGAGMSPDRITYGTLIGGVAKSGDLGF 201

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           A++V + M     +PD   ++ I+      G   +A ++W++L+
Sbjct: 202 ALEVFDEMRERGVEPDVVCYNMIIDGFFKRGDFVKAGEMWERLL 245


>gi|116309556|emb|CAH66618.1| OSIGBa0144C23.4 [Oryza sativa Indica Group]
          Length = 845

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 115/452 (25%), Positives = 228/452 (50%), Gaps = 4/452 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I++  C   ++  A  ++  M      PD      +I GL +   ++KA +VL+ MV 
Sbjct: 249 NSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVE 308

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P++ITYN ++ G    G    ++ +  +MS  G  P V   N+ +  +F +G+  +
Sbjct: 309 AGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNE 368

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI---EVLDDMAIEGCSPDIVTYNS 297
           A   +   + KG  P +I+Y+     VC        +    + + M  +G +P+   +N 
Sbjct: 369 AKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIFNLMLTKGIAPNKHVFNI 428

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+N   + G  D A+L+  ++ ++GM P+++T+ T++ SL   G  D      + M +  
Sbjct: 429 LINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIG 488

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY-NTVLGALCKEGMLNEA 416
             P+   Y  LI G C +G + +A    ++M++K+  P  V Y ++++  LCKEG + E 
Sbjct: 489 VPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEG 548

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
             ++ ++  +   P ++T+N+L++G    G ME+A  L   M   GI P+   + TL+ G
Sbjct: 549 KDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDG 608

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +C+  ++++A+ + +++  +G K  +  Y +++HGL ++++   A ++   MI S     
Sbjct: 609 YCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTVS 668

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              +  ++  +  +  T+EA  L +KL    V
Sbjct: 669 IHTYGVVLGGLCRNNCTDEANMLLEKLFAMNV 700



 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 120/459 (26%), Positives = 225/459 (49%), Gaps = 13/459 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F   G++  A  L   M  +  +P    C ++I+ L ++  ++KA  ++Q MV SG
Sbjct: 216 LIYGFVKDGEVDKAHCLFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSG 275

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  TY++++ GLCK   +  A  +L++M  +G  P+ ITYN+++     +G + +++
Sbjct: 276 IAPDLFTYSLIIDGLCKSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESV 335

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +K     G  P +      I  + K      A  + D M ++G  PDI++Y++  ++ 
Sbjct: 336 RVFKQMSSCGVIPTVDNCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWV 395

Query: 303 CKQGKYDDAVLVI-----NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           C    Y   V V+     N +L++G+ PN   +N L+++    G  D    I + M    
Sbjct: 396 CYW--YVTVVWVMWHNIFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKG 453

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   T+  +I+ LC+ G +D A++ FN MV     P    Y  ++   C  G L +A 
Sbjct: 454 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAK 513

Query: 418 QLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           +L+  ++N     P +  ++++I+ L K+G + +   +   M++ G  P+ +T  +L+ G
Sbjct: 514 ELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEG 573

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           +C    +EEA  LL  +   G +     Y  ++ G CK+ ++D A+ V   M+    KP 
Sbjct: 574 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 633

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
             ++S I+  +     T  A K++ ++I     E GTT+
Sbjct: 634 SVLYSIILHGLFQARRTTAAKKMFHEMI-----ESGTTV 667



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 106/433 (24%), Positives = 199/433 (45%), Gaps = 3/433 (0%)

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           + ++M  +   P+ H    LI    R   ++KA  + + M   G +PDT+T+  ++  LC
Sbjct: 410 IFNLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLC 469

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           + G++  A+   + M   G  P    Y  +++   ++G+  +A     + + K  PP  +
Sbjct: 470 RIGRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGV 529

Query: 259 TY-TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            Y + +I  +CK+  +A   +++D M   G  P++VT+NSL+   C  G  ++A  +++ 
Sbjct: 530 KYFSSIINNLCKEGRVAEGKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDA 589

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           + S G+EPN   Y TL+      G  D    +   M      PT   Y+I+++GL +   
Sbjct: 590 MASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARR 649

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
              A   F++M+       I TY  VLG LC+    +EA  LL  L   +    +IT+N 
Sbjct: 650 TTAAKKMFHEMIESGTTVSIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNI 709

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           +I  + K G  ++A  L+  +   G+ P+  T+  +I    + +  EEA +L   + K G
Sbjct: 710 VISAMFKVGRRQEAKELFDAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSG 769

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           +   +     ++  L    +V  A   L ++  +    + +  S +    + +G   E  
Sbjct: 770 HASDSRLLNHIVRMLLNKAEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHI 829

Query: 558 KLWQKLIEWKVFE 570
           KL     +++ FE
Sbjct: 830 KLLPA--KYQFFE 840



 Score =  154 bits (389), Expect = 1e-34,   Method: Compositional matrix adjust.
 Identities = 108/405 (26%), Positives = 190/405 (46%), Gaps = 2/405 (0%)

Query: 123 ILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           IL N  +R  + D + LI + M  +  IPD      +I  L RI R++ A      MV  
Sbjct: 428 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 487

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY-NTILRTMFDNGKFKQ 240
           G  P    Y  ++ G C  G++  A  L+ EM      P  + Y ++I+  +   G+  +
Sbjct: 488 GVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLCKEGRVAE 547

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                   ++ G  P ++T+  L+E  C    +  A  +LD MA  G  P+   Y +LV+
Sbjct: 548 GKDIMDMMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 607

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+ DDA+ V  ++L +G++P S+ Y+ +LH L       A  K+   M E+  + 
Sbjct: 608 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYSIILHGLFQARRTTAAKKMFHEMIESGTTV 667

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           ++ TY +++ GLC+    D A     ++ + N + DI+T+N V+ A+ K G   EA +L 
Sbjct: 668 SIHTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMFKVGRRQEAKELF 727

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++     P + TY+ +I  L K+   E+A  L+  + ++G + D      ++      
Sbjct: 728 DAISTYGLVPNIQTYSMMITNLIKEESYEEADNLFISVEKSGHASDSRLLNHIVRMLLNK 787

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
            +V +A + L  IG+    +  S   L+     +  K    I++L
Sbjct: 788 AEVAKASNYLSIIGENNLTLEASTISLLASLFSREGKYREHIKLL 832



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 98/386 (25%), Positives = 190/386 (49%), Gaps = 6/386 (1%)

Query: 185 PDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
           P TI TYN+++    +  +    +A++  +  +G  PD  +Y+ I   + D G+  +A  
Sbjct: 173 PPTIHTYNILIDCYRRVHRPDLGLAIVGRLLKNGLGPDDFSYSLIYGFVKD-GEVDKAHC 231

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
            + + + +G  P ++    +I+++CK   + +A  ++  M   G +PD+ TY+ +++  C
Sbjct: 232 LFLEMMEQGVLPKILICNSIIKELCKMKEMDKAESIVQKMVDSGIAPDLFTYSLIIDGLC 291

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K    D A  V+  ++  G  PNSITYN+L+H     G W+   ++   M+     PTV 
Sbjct: 292 KSKAMDKAERVLEQMVEAGTRPNSITYNSLIHGYSISGMWNESVRVFKQMSSCGVIPTVD 351

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL---QLL 420
             N  I+ L K+G  + A   F+ MV K  +PDI++Y+T    +C   +    +    + 
Sbjct: 352 NCNSFIHALFKHGRTNEAKCIFDSMVLKGPKPDIISYSTNASWVCYWYVTVVWVMWHNIF 411

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           +L+     +P    +N LI+  A+ G M+KAM+++  M   G+ PD +T  T+I   CR 
Sbjct: 412 NLMLTKGIAPNKHVFNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRI 471

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT-V 539
            ++++A+     +   G     + Y  +I G C   ++  A +++  M++    P     
Sbjct: 472 GRLDDALHKFNHMVDIGVPPSEAVYGCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKY 531

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIE 565
           FS+I+  +  +G   E   +   +++
Sbjct: 532 FSSIINNLCKEGRVAEGKDIMDMMVQ 557


>gi|359477281|ref|XP_003631958.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Vitis vinifera]
          Length = 898

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 118/439 (26%), Positives = 212/439 (48%), Gaps = 1/439 (0%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           F   GK+  + K    M     +PD     ++I  L + +R+++A ++ + +  +  VP 
Sbjct: 275 FGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPC 334

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
              YN M+ G    G+   A  LL+     G  P VI YN IL  +    + ++A+  + 
Sbjct: 335 AYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIF- 393

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           +++++   P + TY ILI+ +C++  +  A+E+ DDM   G  P+++T N +++  CK  
Sbjct: 394 EEMKRDAVPNVPTYNILIDMLCREGKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQ 453

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           K ++A  +   +  +   PN++T+++L+  LG  G  D    + + M +  H P    Y 
Sbjct: 454 KLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYT 513

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI    K G  +     + +MV   C PD+   NT +  + K G   +   L   +N  
Sbjct: 514 SLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDCVFKAGETEKGRALFREINAH 573

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P   +Y+ LI GL K G   +   L+  M E G   D   +  +I GFC++ +V +A
Sbjct: 574 GFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKA 633

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             LL+E+  +G+      Y  VI GL K  ++D A  + E   S+  K +  V+S+++  
Sbjct: 634 YQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDG 693

Query: 547 VADDGMTEEAYKLWQKLIE 565
               G  +EAY + ++L++
Sbjct: 694 FGKVGRIDEAYLIMEELMQ 712



 Score =  185 bits (469), Expect = 6e-44,   Method: Compositional matrix adjust.
 Identities = 121/483 (25%), Positives = 229/483 (47%), Gaps = 36/483 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T   ++   C   +L +A +L + + +  ++P  +    +I G     + ++A  +L
Sbjct: 299 DDVTYTSMIGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLL 358

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           +     G +P  I YN ++  L K+ ++  A+ + +EM      P+V TYN ++  +   
Sbjct: 359 ERQKAKGSIPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCRE 417

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK   A+    D  R G  P ++T  I+I+++CK   +  A  + + M  + C+P+ VT+
Sbjct: 418 GKLNAALEIRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTF 477

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +SL++   K G+ DDA  +   +L  G  P +I Y +L+ S    G  +   KI   M  
Sbjct: 478 SSLIDGLGKCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVH 537

Query: 356 ASHSPT----------VF-------------------------TYNILINGLCKYGLVDR 380
              SP           VF                         +Y+ILI+GL K GL + 
Sbjct: 538 TGCSPDLTLINTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANE 597

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
               F  M  + C  D   YN V+   CK G +N+A QLL  +      P ++TY ++ID
Sbjct: 598 TYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVID 657

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           GLAK   +++A +L+ +   NGI  + + + +LI GF +  +++EA  +++E+ ++G   
Sbjct: 658 GLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTP 717

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               +  ++  L K+++++ A+   + M   +  P+   +S ++  +       +A+  W
Sbjct: 718 NVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFW 777

Query: 561 QKL 563
           Q++
Sbjct: 778 QEM 780



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 101/394 (25%), Positives = 188/394 (47%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G++ DA  L + M     +P      +LIR   +  R E   K+ + MV +G  PD    
Sbjct: 488 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 547

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
           N  +  + K G+     AL  E++  G  PD  +Y+ ++  +   G   +    +     
Sbjct: 548 NTYMDCVFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKE 607

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           +GC      Y  +I+  CK   + +A ++L++M ++G  P +VTY S+++   K  + D+
Sbjct: 608 QGCVLDTHAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDE 667

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A ++     S G++ N + Y++L+   G  G  D    I++ + +   +P V+T+N L++
Sbjct: 668 AYMLFEEAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLD 727

Query: 371 GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSP 430
            L K   ++ A+  F  M    C P+ +TY+ ++  LC+    N+A      +      P
Sbjct: 728 ALVKAEEINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKP 787

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
             ITY T+I GLAK G + +A  L+ +   NG  PD  ++  +I G   A++  +A  L 
Sbjct: 788 NTITYTTMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALF 847

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQV 524
           +E   +G  +      +++  L K++ ++ A  V
Sbjct: 848 EETRLKGCNIHTKTCVVLLDALHKAECLEQAAIV 881



 Score =  165 bits (417), Expect = 7e-38,   Method: Compositional matrix adjust.
 Identities = 112/476 (23%), Positives = 219/476 (46%), Gaps = 12/476 (2%)

Query: 87  VNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARR 146
           V + LR     K+   P++P            T N ++   C  GKL  A ++ D M R 
Sbjct: 386 VEEALRIFEEMKRDAVPNVP------------TYNILIDMLCREGKLNAALEIRDDMERA 433

Query: 147 NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSA 206
              P+      +I  L +  ++E+A  + + M      P+ +T++ ++ GL K G++  A
Sbjct: 434 GLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKCGRVDDA 493

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
            +L ++M   G  P  I Y +++R+ F  G+ +     +K+ +  GC P L      ++ 
Sbjct: 494 YSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLINTYMDC 553

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
           V K     +   +  ++   G  PD  +Y+ L++   K G  ++   +   +  +G   +
Sbjct: 554 VFKAGETEKGRALFREINAHGFIPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLD 613

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
           +  YN ++      G  +   ++L+ M    H PTV TY  +I+GL K   +D A   F 
Sbjct: 614 THAYNAVIDGFCKSGKVNKAYQLLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFE 673

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +  S   + ++V Y++++    K G ++EA  ++  L     +P + T+N L+D L K  
Sbjct: 674 EAKSNGIKLNVVVYSSLIDGFGKVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAE 733

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            + +A++ +  M +    P+ IT+  LI G CR  +  +A    +E+ K G K     Y 
Sbjct: 734 EINEALICFQSMKDLKCPPNQITYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYT 793

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
            +I GL K+  +  A  +     ++   PD   ++ +++ ++      +AY L+++
Sbjct: 794 TMISGLAKAGNILEASGLFSRFKANGGIPDSASYNAMIEGLSSANKAMDAYALFEE 849



 Score =  150 bits (379), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 102/443 (23%), Positives = 204/443 (46%), Gaps = 1/443 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L       +     ++++ M+     P  +  I L+   ++  ++ +A  ++Q M  
Sbjct: 129 NSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTMRK 188

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P    Y +++G L +  +    + L  +M   G E +V  + T++R     G+   
Sbjct: 189 FKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRVDA 248

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+    +         ++ Y + I+   K   +  + +   +M   G  PD VTY S++ 
Sbjct: 249 ALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSMIG 308

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK  + D+AV +   L      P +  YNT++   GS G +D    +L+        P
Sbjct: 309 VLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGSIP 368

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +V  YN ++  L K   V+ A+  F +M  ++  P++ TYN ++  LC+EG LN AL++ 
Sbjct: 369 SVIAYNCILTCLGKKRRVEEALRIFEEM-KRDAVPNVPTYNILIDMLCREGKLNAALEIR 427

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +  +   P ++T N +ID L K   +E+A  ++  M +   +P+ +T  +LI G  + 
Sbjct: 428 DDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLGKC 487

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +V++A  L +++   G+      Y  +I    K  + +   ++ + M+ +   PD T+ 
Sbjct: 488 GRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMVHTGCSPDLTLI 547

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           +T +  V   G TE+   L++++
Sbjct: 548 NTYMDCVFKAGETEKGRALFREI 570



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/411 (22%), Positives = 184/411 (44%), Gaps = 36/411 (8%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDV-----ITYNTI----LRTMFD----- 234
            YN ++  + +  +      +L+EMS+SG  P       +  N +    LR  FD     
Sbjct: 127 AYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDIIQTM 186

Query: 235 -NGKFKQAIGFWK------DQLRKGCPPYLI--------------TYTILIEQVCKQCGI 273
              KF+ A   +        ++R+  P  ++               +T LI    ++  +
Sbjct: 187 RKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFAREGRV 246

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A+ +LD+M       DIV YN  ++   K GK D +    + + S G+ P+ +TY ++
Sbjct: 247 DAALSLLDEMKSNSLDADIVLYNVCIDCFGKAGKVDMSWKFFHEMKSHGLMPDDVTYTSM 306

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +  L      D   ++ + + +    P  + YN +I G    G  D A     +  +K  
Sbjct: 307 IGVLCKANRLDEAVELFEQLEQNRKVPCAYAYNTMIMGYGSAGKFDEAYGLLERQKAKGS 366

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P ++ YN +L  L K+  + EAL++   +   +  P + TYN LID L ++G +  A+ 
Sbjct: 367 IPSVIAYNCILTCLGKKRRVEEALRIFEEMKRDAV-PNVPTYNILIDMLCREGKLNAALE 425

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +   M   G+ P+ +T   +I   C+A ++EEA  + + +  +        +  +I GL 
Sbjct: 426 IRDDMERAGLFPNVLTVNIMIDRLCKAQKLEEACSIFEGMDDKVCTPNAVTFSSLIDGLG 485

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           K  +VD A  + E M+   + P   V++++++     G  E+ +K++++++
Sbjct: 486 KCGRVDDAYSLYEKMLDCGHVPGAIVYTSLIRSFFKCGRKEDGHKIYKEMV 536



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 80/316 (25%), Positives = 146/316 (46%)

Query: 149 IPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIA 208
           IPD      LI GL++     +  ++   M   G V DT  YN ++ G CK G++  A  
Sbjct: 576 IPDARSYSILIHGLVKAGLANETYELFYAMKEQGCVLDTHAYNAVIDGFCKSGKVNKAYQ 635

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           LL+EM V G  P V+TY +++  +    +  +A   +++    G    ++ Y+ LI+   
Sbjct: 636 LLEEMKVKGHPPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSNGIKLNVVVYSSLIDGFG 695

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   I  A  +++++  +G +P++ T+N L++   K  + ++A++   ++      PN I
Sbjct: 696 KVGRIDEAYLIMEELMQKGLTPNVYTWNCLLDALVKAEEINEALICFQSMKDLKCPPNQI 755

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TY+ L++ L     ++        M +    P   TY  +I+GL K G +  A   F++ 
Sbjct: 756 TYSILINGLCRVRKFNKAFVFWQEMQKLGLKPNTITYTTMISGLAKAGNILEASGLFSRF 815

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
            +    PD  +YN ++  L       +A  L        C+    T   L+D L K  C+
Sbjct: 816 KANGGIPDSASYNAMIEGLSSANKAMDAYALFEETRLKGCNIHTKTCVVLLDALHKAECL 875

Query: 449 EKAMVLYGQMMENGIS 464
           E+A ++   + E   S
Sbjct: 876 EQAAIVGAVLKETAKS 891



 Score = 40.4 bits (93), Expect = 2.4,   Method: Compositional matrix adjust.
 Identities = 27/133 (20%), Positives = 63/133 (47%)

Query: 431 CLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL 490
           C   YN+L+  +A+    +    +  +M  +G  P       L+    ++ ++ EA D++
Sbjct: 124 CPEAYNSLLMVMARNTEFDHLERILEEMSLSGFGPSSNISIELVANCVKSRKLREAFDII 183

Query: 491 KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
           + + K   +   SAY ++I  L + ++ D  + +   M    Y+ +  +F+T+++  A +
Sbjct: 184 QTMRKFKFRPAFSAYTILIGALSEVREPDPMLILFHQMQELGYEVNVHLFTTLIRVFARE 243

Query: 551 GMTEEAYKLWQKL 563
           G  + A  L  ++
Sbjct: 244 GRVDAALSLLDEM 256


>gi|224138172|ref|XP_002326536.1| predicted protein [Populus trichocarpa]
 gi|222833858|gb|EEE72335.1| predicted protein [Populus trichocarpa]
          Length = 697

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 122/443 (27%), Positives = 218/443 (49%), Gaps = 5/443 (1%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMSG 182
           +   C  G + DA   I  +   NQ P   +C N LI+G  +  R ++A K+L+ M   G
Sbjct: 232 IHGLCRVGSIEDAWNKIQDLRSSNQ-PLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEG 290

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD  +Y+++V   C  G I S + L+ EM     +P ++   ++L  +   G     +
Sbjct: 291 ISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGLVNDCL 350

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            F+ +   KG    LI+Y+ LI    K   +  A  ++ +M   G  PD + Y SL+   
Sbjct: 351 NFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREY 410

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C++G   +A+     +L  G++P+ IT N ++    SRG ++     ++ M + +  P  
Sbjct: 411 CRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNS 470

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM-LNEALQLLH 421
           +TY+++IN LCKY  V++A      M   N  P ++ Y T++    K+     +A +L  
Sbjct: 471 YTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYR 530

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +    C P  +T   L+D  +K+G M KA+ L+ +M E G+S D+     +I G+CR  
Sbjct: 531 KMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVG 590

Query: 482 QVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            V+ A  + K++ KR N   N   Y  ++ G CK K++DMA  +++ M  +   PD   +
Sbjct: 591 NVKRAWSMYKKM-KRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDVKTY 649

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           + ++         + AY+++ ++
Sbjct: 650 TALIAGYQRIENIDRAYEVFDEM 672



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 105/389 (26%), Positives = 186/389 (47%), Gaps = 43/389 (11%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ-----C 271
           G E ++ + N +L+ + +  K +     + D    G  P + TYTI+I   CK+      
Sbjct: 145 GVELNISSCNFLLKCLAEGDKLEAVRSLFDDLKNSGPSPNVYTYTIMINFYCKERHGQNI 204

Query: 272 GIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYN 331
            + +A  +L++M  +G +P +VTY   ++  C+ G  +DA   I +L S     N   YN
Sbjct: 205 DMEQASLILEEMEEKGENPTVVTYGVYIHGLCRVGSIEDAWNKIQDLRSSNQPLNIYCYN 264

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
            L+     +G  D   K+L+ M +   SP +++Y+IL+N  C  G ++  +N   +M   
Sbjct: 265 ALIQGFCQKGRPDEALKLLEEMKDEGISPDIYSYSILVNAFCTEGDIESGMNLIQEMEHC 324

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK------- 444
           N +P +V   +VL  L  +G++N+ L   H L+       LI+Y+TLI G  K       
Sbjct: 325 NKKPPLVCCTSVLMGLRTKGLVNDCLNFFHELSAKGYKHDLISYSTLIHGFLKGHNVKSA 384

Query: 445 ----------------------------KGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
                                       KGC+++A+  +  M+++G+ PD IT   ++  
Sbjct: 385 NNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDGLQPDIITCNHIVDQ 444

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           +C   Q EEA+  + ++ K  N + NS  Y ++I+ LCK + V+ A +VL +M      P
Sbjct: 445 YCSRGQFEEALIYINQM-KDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFP 503

Query: 536 DDTVFSTIVKKVADDGMTE-EAYKLWQKL 563
               ++TI+   A       +A+KL++K+
Sbjct: 504 SVIHYTTIMDGYAKQFKNPMKAWKLYRKM 532



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 116/455 (25%), Positives = 210/455 (46%), Gaps = 18/455 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIP---DFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           +++ F S   L DA    D+  +  +I    +   C  L++ L   D++E    +   + 
Sbjct: 121 LIKVFASNKMLADAK---DVFMQAKKIGVELNISSCNFLLKCLAEGDKLEAVRSLFDDLK 177

Query: 180 MSGGVPDTITYNMMVGGLCK--RGQ---IRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            SG  P+  TY +M+   CK   GQ   +  A  +L+EM   G  P V+TY   +  +  
Sbjct: 178 NSGPSPNVYTYTIMINFYCKERHGQNIDMEQASLILEEMEEKGENPTVVTYGVYIHGLCR 237

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G  + A    +D      P  +  Y  LI+  C++     A+++L++M  EG SPDI +
Sbjct: 238 VGSIEDAWNKIQDLRSSNQPLNIYCYNALIQGFCQKGRPDEALKLLEEMKDEGISPDIYS 297

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ LVN  C +G  +  + +I  +     +P  +   ++L  L ++G    V+  L+  +
Sbjct: 298 YSILVNAFCTEGDIESGMNLIQEMEHCNKKPPLVCCTSVLMGLRTKGL---VNDCLNFFH 354

Query: 355 EAS---HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           E S   +   + +Y+ LI+G  K   V  A N  ++M      PD + Y +++   C++G
Sbjct: 355 ELSAKGYKHDLISYSTLIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKG 414

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L EAL+  + +      P +IT N ++D    +G  E+A++   QM +  I P+  T+ 
Sbjct: 415 CLKEALKNFYTMLQDGLQPDIITCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYS 474

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM-AIQVLELMIS 530
            +I   C+   VE+A ++L  + K         Y  ++ G  K  K  M A ++   M  
Sbjct: 475 VIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPK 534

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              KPD+   + +V   +  G   +A  L++++ E
Sbjct: 535 LGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAE 569



 Score =  125 bits (313), Expect = 8e-26,   Method: Compositional matrix adjust.
 Identities = 94/364 (25%), Positives = 159/364 (43%), Gaps = 39/364 (10%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  F     +  A+ L+  M +   +PD+   I+LIR   R   +++A K    M+  G
Sbjct: 371 LIHGFLKGHNVKSANNLVHEMRKNGLVPDYIIYISLIREYCRKGCLKEALKNFYTMLQDG 430

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD IT N +V   C RGQ   A+  +++M                             
Sbjct: 431 LQPDIITCNHIVDQYCSRGQFEEALIYINQM----------------------------- 461

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              KDQ      P   TY+++I  +CK   + +A EVL  M  +   P ++ Y ++++  
Sbjct: 462 ---KDQ---NILPNSYTYSVIINWLCKYQAVEKAWEVLPVMFKDNIFPSVIHYTTIMDGY 515

Query: 303 CKQGKYD-DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            KQ K    A  +   +   G +P+++T   L+     RG       +   M E   S  
Sbjct: 516 AKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRD 575

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            F +  +I+G C+ G V RA + + +M   N  P++ TY  ++   CK   L+ A  L+ 
Sbjct: 576 EFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLID 635

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +  +S +P + TY  LI G  +   +++A  ++ +M + G  PD I + TL  G   AD
Sbjct: 636 DMKRNSVTPDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTLGLG---AD 692

Query: 482 QVEE 485
            V E
Sbjct: 693 VVTE 696



 Score =  104 bits (259), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 129/290 (44%), Gaps = 37/290 (12%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N I+  +CSRG+  +A   I+ M  +N +P+ +    +I  L +   +EKA +VL +M
Sbjct: 437 TCNHIVDQYCSRGQFEEALIYINQMKDQNILPNSYTYSVIINWLCKYQAVEKAWEVLPVM 496

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQ-IRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
                 P  I Y  ++ G  K+ +    A  L  +M   GC+PD +T   ++      GK
Sbjct: 497 FKDNIFPSVIHYTTIMDGYAKQFKNPMKAWKLYRKMPKLGCKPDNVTLTVLVDMFSKRGK 556

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+  +K+   +G       +T +I+  C+   + RA  +   M     +P++ TY  
Sbjct: 557 MSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMYKKMKRNNVTPNVKTYTC 616

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           LV+  CK  + D A ++I++     M+ NS+T                            
Sbjct: 617 LVDGFCKLKRLDMATMLIDD-----MKRNSVT---------------------------- 643

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV-LGA 406
             P V TY  LI G  +   +DRA   F++M  K   PD + Y T+ LGA
Sbjct: 644 --PDVKTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAYLTLGLGA 691



 Score = 57.8 bits (138), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 47/183 (25%), Positives = 71/183 (38%), Gaps = 35/183 (19%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  F  RGK++ A  L   MA      D      +I G  R+  +++A  + 
Sbjct: 540 DNVTLTVLVDMFSKRGKMSKALNLFKEMAEEGLSRDEFAFTAIIDGYCRVGNVKRAWSMY 599

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +   P+  TY  +V G CK  ++  A  L+D+M  +   PDV             
Sbjct: 600 KKMKRNNVTPNVKTYTCLVDGFCKLKRLDMATMLIDDMKRNSVTPDV------------- 646

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
                                  TYT LI    +   I RA EV D+M  +G  PD + Y
Sbjct: 647 ----------------------KTYTALIAGYQRIENIDRAYEVFDEMKKKGTLPDHIAY 684

Query: 296 NSL 298
            +L
Sbjct: 685 LTL 687


>gi|242066030|ref|XP_002454304.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
 gi|241934135|gb|EES07280.1| hypothetical protein SORBIDRAFT_04g028250 [Sorghum bicolor]
          Length = 638

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 111/380 (29%), Positives = 197/380 (51%), Gaps = 1/380 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           PDT+TY+ ++   CK G+  SA  LL+EM  +G +P    Y  ++   F       A+  
Sbjct: 228 PDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSL 287

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
           +++   + C P + TYT LI  + K   I  A     +M  EGC PD V  N+++NF  K
Sbjct: 288 FEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGK 347

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVF 363
            G+ DDA+ +   + +    P+ +TYNT++ +L  S+     V    + M E+  SP+ F
Sbjct: 348 AGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGISPSSF 407

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           TY+ILI+G CK   +++A+    +M  K   P    Y +++ AL K    + A +L   L
Sbjct: 408 TYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQEL 467

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
             +  S     Y  +I  L K G ++ A+ ++ +M + G +PD   +  L+ G  R   +
Sbjct: 468 KENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGML 527

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA+  ++ + + G     ++Y ++++GL K+     A+++L  M  S  +PD   ++T+
Sbjct: 528 DEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNTV 587

Query: 544 VKKVADDGMTEEAYKLWQKL 563
           +  ++  GM EEA KL +++
Sbjct: 588 LGALSHAGMFEEAAKLMEEM 607



 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 108/402 (26%), Positives = 194/402 (48%), Gaps = 5/402 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  FC  G+   A++L++ M      P       LI    ++D +  A  + 
Sbjct: 229 DTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIYTMLITLFFKLDDVHGALSLF 288

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      PD  TY  ++ GL K G+I  A     EM   GC PD +  N ++  +   
Sbjct: 289 EEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMINFLGKA 348

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPDI 292
           G+   A+  +++     C P ++TY  +I+ + +    +RA EV    + M   G SP  
Sbjct: 349 GRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFE--SKSRASEVPSWFERMKESGISPSS 406

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY+ L++  CK  + + A++++  +  +G  P    Y +L+ +LG    +D   ++   
Sbjct: 407 FTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQE 466

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           + E   S +   Y ++I  L K G +D AIN F++M    C PD+  YN ++  L + GM
Sbjct: 467 LKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLARTGM 526

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+EAL  +  +    C P + +YN +++GLAK G   +AM +   M ++ + PD +++ T
Sbjct: 527 LDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVSYNT 586

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           ++     A   EEA  L++E+   G +     Y  ++  + K
Sbjct: 587 VLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGK 628



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 106/348 (30%), Positives = 179/348 (51%), Gaps = 1/348 (0%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A  L + M  +   PD      LIRGL +  RI++A      M   G  PDT+  N M+ 
Sbjct: 284 ALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMIN 343

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK-GCP 254
            L K G++  A+ L  EM    C P V+TYNTI++ +F++      +  W +++++ G  
Sbjct: 344 FLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 403

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P   TY+ILI+  CK   + +A+ +L++M  +G  P    Y SL++   K  +YD A  +
Sbjct: 404 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 463

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
              L       ++  Y  ++  LG  G  D    + D MN+   +P V+ YN L++GL +
Sbjct: 464 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 523

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G++D A+++  +M    C PDI +YN +L  L K G  + A+++L  +  S+  P +++
Sbjct: 524 TGMLDEALSTMRRMQEHGCIPDINSYNIILNGLAKTGGPHRAMEMLSNMKQSTVRPDVVS 583

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           YNT++  L+  G  E+A  L  +M   G   D IT+ +++    + D 
Sbjct: 584 YNTVLGALSHAGMFEEAAKLMEEMNTLGFEYDLITYSSILEAIGKVDH 631



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 109/376 (28%), Positives = 177/376 (47%), Gaps = 46/376 (12%)

Query: 232 MFDNGKF-KQAIG-FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG-C 288
           M  N K   +AI  F++ + RK C P    Y  +I  +  +    +  E+ ++M+ EG C
Sbjct: 168 MLGNAKMVSKAIAIFYQIKTRK-CQPTAQAYNSMIIMLMHEGQYGKVHELYNEMSTEGHC 226

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
            PD +TY++L++  CK G+ D A  ++N +   GM+P +  Y T+L +L  +   D V  
Sbjct: 227 FPDTMTYSALISAFCKLGRRDSATQLLNEMKENGMQPTTKIY-TMLITLFFK--LDDVHG 283

Query: 349 ILDIMNEASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
            L +  E  H    P VFTY  LI GL K G +D A + F +M  + C+PD V  N ++ 
Sbjct: 284 ALSLFEEMRHQYCRPDVFTYTELIRGLGKAGRIDEAYHFFYEMQREGCRPDTVVMNNMIN 343

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNT---------------------------- 437
            L K G L++A++L   +    C P ++TYNT                            
Sbjct: 344 FLGKAGRLDDAMKLFQEMGTLRCIPSVVTYNTIIKALFESKSRASEVPSWFERMKESGIS 403

Query: 438 --------LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
                   LIDG  K   MEKAM+L  +M E G  P    + +LI    +A + + A +L
Sbjct: 404 PSSFTYSILIDGFCKTNRMEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACEL 463

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            +E+ +         Y ++I  L K+ ++D AI + + M      PD   ++ ++  +A 
Sbjct: 464 FQELKENCGSSSARVYAVMIKHLGKAGRLDDAINMFDEMNKLGCAPDVYAYNALMSGLAR 523

Query: 550 DGMTEEAYKLWQKLIE 565
            GM +EA    +++ E
Sbjct: 524 TGMLDEALSTMRRMQE 539


>gi|297800058|ref|XP_002867913.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297313749|gb|EFH44172.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 724

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 214/444 (48%), Gaps = 1/444 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L+NF   G+L +A  ++  M  +   P       ++   I    I+ A  V   M + G
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             PD+ ++ +MV G  + G+I+ A   L  M   G  PD  T   IL  + +NG   +AI
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            +++  +  G  P LI +T LI+ +CK+  I +A E+L++M   G  P++ T+ +L++  
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 303 CKQGKYDDAVLVINNLLSRGM-EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
           CK+G  + A  +   L+   + +PN  TY +++         +  + +   M E    P 
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 415

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TY  LING CK G  DRA    N M  +  +P+I TYN V+ +LCK+    EA +LL+
Sbjct: 416 VNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLN 475

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
                      +TY  LI    K+  +++A+  + +M + G   D   +  LI  FCR  
Sbjct: 476 KAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 535

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +++E+  L + +   G       Y  +I G CK    D+A++    M      PD   + 
Sbjct: 536 KMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHGCVPDSFTYG 595

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
           +++  +    M +EA KL++ +I+
Sbjct: 596 SLISGLCKKSMVDEACKLYEAMID 619



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 124/441 (28%), Positives = 209/441 (47%), Gaps = 12/441 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDA----SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           D  T   IL   C  G +  A     K+ID+  + N I +F    +LI GL +   I++A
Sbjct: 274 DNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLI-NF---TSLIDGLCKKGSIKQA 329

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC-EPDVITYNTILR 230
            ++L+ MV +G  P+  T+  ++ GLCKRG    A  L  ++  S   +P+V TY +++ 
Sbjct: 330 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIG 389

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                 K  +A   +     +G  P + TYT LI   CK     RA E+++ M  EG  P
Sbjct: 390 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRP 449

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           +I TYN++++  CK+ +  +A  ++N   S G+E + +TY  L+     +          
Sbjct: 450 NIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFF 509

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             MN+      +   NILI   C+   +  +   F  +VS    P   TY +++   CKE
Sbjct: 510 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKE 569

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G  + AL+  H +    C P   TY +LI GL KK  +++A  LY  M++ G+SP ++T 
Sbjct: 570 GDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTR 629

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            TL + +C+ +    A+ +L+ + K   K+     R ++  LC  KKV +A    + ++ 
Sbjct: 630 VTLAYEYCKRNDSASAMIVLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLE 686

Query: 531 SRYKPDDTVFSTIVKKVADDG 551
                D    +      ++ G
Sbjct: 687 KDSSADRVTLAAFTTACSESG 707



 Score =  176 bits (447), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 206/427 (48%), Gaps = 1/427 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+     G +  A  + D M+ R   PD      ++ G  R  +I++A + L  M
Sbjct: 207 TMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVIGCFRDGKIQEADRWLSGM 266

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G +PD  T  +++  LC+ G +  AI    +M   G +P++I + +++  +   G  
Sbjct: 267 IQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 326

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC-SPDIVTYNS 297
           KQA    ++ +R G  P + T+T LI+ +CK+    +A  +   +       P++ TY S
Sbjct: 327 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTS 386

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++   CK+ K + A ++ + +  +G+ PN  TY TL++     G +D   +++++M++  
Sbjct: 387 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEG 446

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P ++TYN +I+ LCK      A    N+  S   + D VTY  ++   CK+  + +AL
Sbjct: 447 FRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQAL 506

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
                +N +     +   N LI    ++  M+++  L+  ++  G+ P   T+ ++I G+
Sbjct: 507 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGY 566

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+    + A+     + + G    +  Y  +I GLCK   VD A ++ E MI     P +
Sbjct: 567 CKEGDFDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 626

Query: 538 TVFSTIV 544
               T+ 
Sbjct: 627 VTRVTLA 633



 Score =  136 bits (343), Expect = 3e-29,   Method: Compositional matrix adjust.
 Identities = 79/300 (26%), Positives = 157/300 (52%), Gaps = 1/300 (0%)

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ ++ DM  +G SP  +T N ++  + + G  D A  V + +  RG+ P+S ++  ++ 
Sbjct: 189 AVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRGVCPDSSSFKLMVI 248

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                G     D+ L  M +    P   T  ++++ LC+ GLV+RAI  F +M+    +P
Sbjct: 249 GCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAIWYFRKMIDLGFKP 308

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +++ + +++  LCK+G + +A ++L  +  +   P + T+  LIDGL K+G  EKA  L+
Sbjct: 309 NLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLF 368

Query: 456 GQMMENGI-SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
            +++ + I  P+  T+ ++I G+C+ D++  A  L   + ++G     + Y  +I+G CK
Sbjct: 369 LKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCK 428

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           +   D A +++ LM    ++P+   ++ ++  +       EAY+L  K     +   G T
Sbjct: 429 AGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 488



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 163/378 (43%), Gaps = 4/378 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRN-QIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T+  ++   C RG    A +L   + R +   P+ H   ++I G  + D++ +A  +   
Sbjct: 347 THTALIDGLCKRGWTEKAFRLFLKLVRSDIYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 406

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+  TY  ++ G CK G    A  L++ M   G  P++ TYN ++ ++    +
Sbjct: 407 MKEQGLFPNVNTYTTLINGHCKAGNFDRAYELMNLMDDEGFRPNIYTYNAVIDSLCKKSR 466

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A          G     +TYTILI++ CKQ  I +A+     M   G   D+   N 
Sbjct: 467 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEADMRLNNI 526

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   C+Q K  ++  +   ++S G+ P   TY +++      G +D   K    M    
Sbjct: 527 LIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYFHNMKRHG 586

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P  FTY  LI+GLCK  +VD A   +  M+ +   P  VT  T+    CK      A+
Sbjct: 587 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSASAM 646

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L  L+       + T  TL+  L  +  +  A + + +++E   S D +T        
Sbjct: 647 IVLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAFTTAC 703

Query: 478 CRADQVEEAVDLLKEIGK 495
             + +     DL + I +
Sbjct: 704 SESGKNNLVADLTERISR 721



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 59/251 (23%), Positives = 101/251 (40%), Gaps = 7/251 (2%)

Query: 95  TITKKSHDPS----LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           ++ KKS  P     L  +    +E D  T   ++Q  C +  +  A      M +     
Sbjct: 460 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQSDIKQALAFFCRMNKTGFEA 519

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D      LI    R  +++++ ++ Q++V  G VP   TY  M+ G CK G    A+   
Sbjct: 520 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLVPTKETYTSMISGYCKEGDFDLALKYF 579

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
             M   GC PD  TY +++  +       +A   ++  + +G  P  +T   L  + CK+
Sbjct: 580 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 639

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
              A A+ VL+ +  +     I T  +LV   C + K   A L    LL +    + +T 
Sbjct: 640 NDSASAMIVLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTL 696

Query: 331 NTLLHSLGSRG 341
                +    G
Sbjct: 697 AAFTTACSESG 707



 Score = 69.7 bits (169), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 42/203 (20%), Positives = 96/203 (47%)

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           ++    + G ++ A+     M ++   P  +T N VL    + G+++ A  +   ++   
Sbjct: 176 MLRNFSEIGRLNEAVGMVMDMQNQGLSPSSITMNCVLEIAIESGLIDYAENVFDEMSVRG 235

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P   ++  ++ G  + G +++A      M++ G  PD+ T   ++   C    V  A+
Sbjct: 236 VCPDSSSFKLMVIGCFRDGKIQEADRWLSGMIQRGFIPDNATCTLILSALCENGLVNRAI 295

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
              +++   G K     +  +I GLCK   +  A ++LE M+ + +KP+    + ++  +
Sbjct: 296 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 355

Query: 548 ADDGMTEEAYKLWQKLIEWKVFE 570
              G TE+A++L+ KL+   +++
Sbjct: 356 CKRGWTEKAFRLFLKLVRSDIYK 378


>gi|255573471|ref|XP_002527661.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532966|gb|EEF34732.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 766

 Score =  189 bits (481), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/445 (27%), Positives = 214/445 (48%), Gaps = 35/445 (7%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I KA++VL+ M M+G  P  +TY   + GLC+ G +  A+ L+ ++ +     +   YN 
Sbjct: 269 IVKATEVLEEMEMNGESPTVVTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNA 328

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++     NG+  +A    +D    G  P   +Y+ILI+ +CK+  + +A++++++M    
Sbjct: 329 VIHEFCRNGELHEAFELLEDMRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSN 388

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             P +VTY+SL +  CK G  + ++ + +NL + G + + I+YNTL++    +    +  
Sbjct: 389 VKPSLVTYSSLFDGLCKSGLTEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSAC 448

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ------------- 394
           K++  M      P  FT+N LI+G CK   +D+A+  F  M+    Q             
Sbjct: 449 KLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEF 508

Query: 395 ----------------------PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
                                 P+  TYN V+  LCKE    +A ++L ++  ++  PC 
Sbjct: 509 NREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCA 568

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           I YNTLIDG AK+    KA++LY +M++ GI P  +T+  LI  F    +++EA  L KE
Sbjct: 569 IHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKE 628

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + K+G       +  +I G CK   +  A  + E M      P+   ++ ++        
Sbjct: 629 MIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKR 688

Query: 553 TEEAYKLWQKLIEWKVFEKGTTLLA 577
            ++A  L+ K+    V   G T  A
Sbjct: 689 MDKADFLFNKMKRDNVTPDGLTYTA 713



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 118/458 (25%), Positives = 225/458 (49%), Gaps = 4/458 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQI 177
           T    +   C  G +  A +LI  +  RNQ P   +C N +I    R   + +A ++L+ 
Sbjct: 290 TYGAYIHGLCRAGCVEFALRLIRDLRIRNQ-PLNSYCYNAVIHEFCRNGELHEAFELLED 348

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P   +Y++++ GLCK+GQ+  A+ L++EM  S  +P ++TY+++   +  +G 
Sbjct: 349 MRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGL 408

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            + ++  + +   +G    +I+Y  LI     Q  +  A +++ +M + G  P+  T+N 
Sbjct: 409 TEISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNR 468

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEA 356
           L++  CK+ + D A+ V   +L  G++ N  T N +       G  W+A+ K+++ + + 
Sbjct: 469 LIHGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEAL-KLINEVQDL 527

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P  +TYNI+I  LCK    ++A      M+  N  P  + YNT++    K+    +A
Sbjct: 528 GIVPNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKA 587

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           L L   +      P ++TY  LI+  + +  M++A  L+ +M++ G+ PD+I    +I G
Sbjct: 588 LLLYAKMLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAG 647

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           FC+   ++ A  L +E+ + G       Y  +I G  K K++D A  +   M      PD
Sbjct: 648 FCKVGDMKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPD 707

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
              ++ ++      G ++   +++ ++ E  VF   T 
Sbjct: 708 GLTYTALIFGYQSLGYSDRVREMFNEMKENGVFPNYTA 745



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 113/426 (26%), Positives = 200/426 (46%), Gaps = 43/426 (10%)

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           M G +   I  N+++    +   +  A  +  +    G E ++++ N +L    +  + +
Sbjct: 174 MGGSI---IVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQTE 230

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVC-----KQCGIARAIEVLDDMAIEGCSPDIVT 294
                +++    G  P + TYTI++   C     K   I +A EVL++M + G SP +VT
Sbjct: 231 FIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTVVT 290

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y + ++  C+ G  + A+ +I +L  R    NS  YN ++H     G      ++L+ M 
Sbjct: 291 YGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLEDMR 350

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               SPT ++Y+ILI+GLCK G V++A++   +MV  N +P +VTY+++   LCK G+  
Sbjct: 351 SHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNVKPSLVTYSSLFDGLCKSGLTE 410

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            +L + H L        +I+YNTLI+G   +  M  A  L  +M  NG  P+  T   LI
Sbjct: 411 ISLSMFHNLGAEGYKHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLI 470

Query: 475 WGFCRADQVE-----------------------------------EAVDLLKEIGKRGNK 499
            GFC+  +++                                   EA+ L+ E+   G  
Sbjct: 471 HGFCKRQRLDKALEVFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIV 530

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             +  Y +VI  LCK +K + A +VL +M+ +   P    ++T++   A      +A  L
Sbjct: 531 PNSYTYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLL 590

Query: 560 WQKLIE 565
           + K+++
Sbjct: 591 YAKMLK 596



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 81/325 (24%), Positives = 145/325 (44%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           ++D  + N ++  F  +  +  A KL+  M     +P+      LI G  +  R++KA +
Sbjct: 425 KHDVISYNTLINGFVLQRDMGSACKLVHEMRMNGSVPNSFTFNRLIHGFCKRQRLDKALE 484

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V  IM+  G   +  T N+M     + G    A+ L++E+   G  P+  TYN +++ + 
Sbjct: 485 VFTIMLKVGVQLNIFTCNIMADEFNREGHFWEALKLINEVQDLGIVPNSYTYNIVIKWLC 544

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              K ++A       L+    P  I Y  LI+   KQ    +A+ +   M   G  P IV
Sbjct: 545 KEQKTEKAWEVLPVMLKNNVFPCAIHYNTLIDGYAKQSNPTKALLLYAKMLKVGIPPSIV 604

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY  L+N    + K  +A  +   ++ +G+ P+ I +  ++      G   +   + + M
Sbjct: 605 TYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGDMKSAWALYEEM 664

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
           ++   SP V TY  LI+G  K   +D+A   FN+M   N  PD +TY  ++      G  
Sbjct: 665 SQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTALIFGYQSLGYS 724

Query: 414 NEALQLLHLLNGSSCSPCLITYNTL 438
           +   ++ + +  +   P    Y TL
Sbjct: 725 DRVREMFNEMKENGVFPNYTAYATL 749



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 61/222 (27%), Positives = 101/222 (45%), Gaps = 4/222 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIP-DFHFCINLIRGLIRIDRIEKASKVLQI 177
           T N +++  C   K   A +++ +M + N  P   H+   LI G  +     KA  +   
Sbjct: 535 TYNIVIKWLCKEQKTEKAWEVLPVMLKNNVFPCAIHYN-TLIDGYAKQSNPTKALLLYAK 593

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G  P  +TY M++     R +++ A  L  EM   G  PD I +  I+      G 
Sbjct: 594 MLKVGIPPSIVTYTMLINMFSNRSKMQEAYYLFKEMIKKGLVPDEIIFTCIIAGFCKVGD 653

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            K A   +++  + G  P ++TYT LI+   K   + +A  + + M  +  +PD +TY +
Sbjct: 654 MKSAWALYEEMSQWGKSPNVVTYTCLIDGYFKIKRMDKADFLFNKMKRDNVTPDGLTYTA 713

Query: 298 LVNFSCKQGKYDDAVL-VINNLLSRGMEPNSITYNTLLHSLG 338
           L+ F  +   Y D V  + N +   G+ PN   Y TL   LG
Sbjct: 714 LI-FGYQSLGYSDRVREMFNEMKENGVFPNYTAYATLGLHLG 754



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 72/341 (21%), Positives = 146/341 (42%), Gaps = 25/341 (7%)

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLIT-YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
           D+ +F++A        ++G  P+++T +  L  ++       +A+      +  G S  I
Sbjct: 68  DSNRFEKARKPNSCPRKRGLFPFVLTVFKTLNWKLATHTNFFKAV------SFHGFSHSI 121

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             +  +++     G   +  + + +++S   E N +  + L  +L            LD 
Sbjct: 122 YAFKIIIHVLASAGLQMEVQIFLRDIISYYKEVN-LDVSELFSTL------------LDS 168

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
             +A    ++   N+LI    +  ++  A + F Q      + +I++ N +L    +   
Sbjct: 169 PQDAHMGGSIIVANVLIKVFAENNMLVDAADVFVQARRFGLELNILSCNFLLNCFAEANQ 228

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLID-----GLAKKGCMEKAMVLYGQMMENGISPDD 467
                 L   L  S  SP + TY  +++        K   + KA  +  +M  NG SP  
Sbjct: 229 TEFIRSLFEELKDSGPSPNVFTYTIMMNYYCKGSFGKNIDIVKATEVLEEMEMNGESPTV 288

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +T+   I G CRA  VE A+ L++++  R   + +  Y  VIH  C++ ++  A ++LE 
Sbjct: 289 VTYGAYIHGLCRAGCVEFALRLIRDLRIRNQPLNSYCYNAVIHEFCRNGELHEAFELLED 348

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           M S    P    +S ++  +   G  E+A  L +++++  V
Sbjct: 349 MRSHGISPTAYSYSILIDGLCKKGQVEKALDLIEEMVQSNV 389


>gi|5738362|emb|CAB52870.1| putative protein [Arabidopsis thaliana]
 gi|7268785|emb|CAB78991.1| putative protein [Arabidopsis thaliana]
          Length = 1302

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 212/444 (47%), Gaps = 1/444 (0%)

Query: 123  ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            +L+NF   G+L +A  ++  M  +   P       ++   + +  IE A  V   M + G
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 183  GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             VPD+ +Y +MV G  + G+I+ A   L  M   G  PD  T   IL  + +NG   +AI
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 873

Query: 243  GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             +++  +  G  P LI +T LI+ +CK+  I +A E+L++M   G  P++ T+ +L++  
Sbjct: 874  WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 933

Query: 303  CKQGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK+G  + A  L +  + S   +PN  TY +++         +  + +   M E    P 
Sbjct: 934  CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 993

Query: 362  VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            V TY  LING CK G   RA    N M  +   P+I TYN  + +LCK+    EA +LL+
Sbjct: 994  VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 1053

Query: 422  LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
                       +TY  LI    K+  + +A+  + +M + G   D   +  LI  FCR  
Sbjct: 1054 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 1113

Query: 482  QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
            +++E+  L + +   G       Y  +I   CK   +D+A++    M      PD   + 
Sbjct: 1114 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 1173

Query: 542  TIVKKVADDGMTEEAYKLWQKLIE 565
            +++  +    M +EA KL++ +I+
Sbjct: 1174 SLISGLCKKSMVDEACKLYEAMID 1197



 Score =  181 bits (460), Expect = 7e-43,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 210/441 (47%), Gaps = 12/441 (2%)

Query: 116  DEKTNNKILQNFCSRGKLTDA----SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
            D  T   IL   C  G +  A     K+ID+  + N I +F    +LI GL +   I++A
Sbjct: 852  DNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLI-NF---TSLIDGLCKKGSIKQA 907

Query: 172  SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC-EPDVITYNTILR 230
             ++L+ MV +G  P+  T+  ++ GLCKRG    A  L  ++  S   +P+V TY +++ 
Sbjct: 908  FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 967

Query: 231  TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                  K  +A   +     +G  P + TYT LI   CK     RA E+++ M  EG  P
Sbjct: 968  GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMP 1027

Query: 291  DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
            +I TYN+ ++  CK+ +  +A  ++N   S G+E + +TY  L+     +   +      
Sbjct: 1028 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF 1087

Query: 351  DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
              MN+      +   NILI   C+   +  +   F  +VS    P   TY +++   CKE
Sbjct: 1088 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKE 1147

Query: 411  GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
            G ++ AL+  H +    C P   TY +LI GL KK  +++A  LY  M++ G+SP ++T 
Sbjct: 1148 GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTR 1207

Query: 471  RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             TL + +C+ +    A+ LL+ + K   K+     R ++  LC  KKV +A    + ++ 
Sbjct: 1208 VTLAYEYCKRNDSANAMILLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLE 1264

Query: 531  SRYKPDDTVFSTIVKKVADDG 551
                 D    +      ++ G
Sbjct: 1265 KDSSADRVTLAAFTTACSESG 1285



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 207/427 (48%), Gaps = 1/427 (0%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N +L+     G +  A  + D M+ R  +PD      ++ G  R  +I++A + L  M
Sbjct: 785  TMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGM 844

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +  G +PD  T  +++  LC+ G +  AI    +M   G +P++I + +++  +   G  
Sbjct: 845  IQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 904

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV-LDDMAIEGCSPDIVTYNS 297
            KQA    ++ +R G  P + T+T LI+ +CK+    +A  + L  +  +   P++ TY S
Sbjct: 905  KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 964

Query: 298  LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
            ++   CK+ K + A ++ + +  +G+ PN  TY TL++     G +    +++++M +  
Sbjct: 965  MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 1024

Query: 358  HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
              P ++TYN  I+ LCK      A    N+  S   + D VTY  ++   CK+  +N+AL
Sbjct: 1025 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 1084

Query: 418  QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
                 +N +     +   N LI    ++  M+++  L+  ++  G+ P   T+ ++I  +
Sbjct: 1085 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 1144

Query: 478  CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
            C+   ++ A+     + + G    +  Y  +I GLCK   VD A ++ E MI     P +
Sbjct: 1145 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 1204

Query: 538  TVFSTIV 544
                T+ 
Sbjct: 1205 VTRVTLA 1211



 Score =  129 bits (323), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 161/348 (46%), Gaps = 36/348 (10%)

Query: 228  ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
            +LR   + G+  +A+G   D   +G  P  IT   ++E   +   I  A  V D+M++ G
Sbjct: 754  MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 813

Query: 288  CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              PD  +Y  +V    + GK  +A   +  ++ RG  P++ T            C     
Sbjct: 814  VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNAT------------C----- 856

Query: 348  KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
                               +++  LC+ GLV+RAI  F +M+    +P+++ + +++  L
Sbjct: 857  ------------------TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 898

Query: 408  CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NGISPD 466
            CK+G + +A ++L  +  +   P + T+  LIDGL K+G  EKA  L+ +++  +   P+
Sbjct: 899  CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPN 958

Query: 467  DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
              T+ ++I G+C+ D++  A  L   + ++G     + Y  +I+G CK+     A +++ 
Sbjct: 959  VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 1018

Query: 527  LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
            LM    + P+   ++  +  +       EAY+L  K     +   G T
Sbjct: 1019 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 1066



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 51/217 (23%), Positives = 91/217 (41%), Gaps = 3/217 (1%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            +E D  T   ++Q  C +  +  A      M +     D      LI    R  +++++ 
Sbjct: 1060 LEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESE 1119

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++ Q++V  G +P   TY  M+   CK G I  A+     M   GC PD  TY +++  +
Sbjct: 1120 RLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGL 1179

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                   +A   ++  + +G  P  +T   L  + CK+   A A+ +L+ +  +     I
Sbjct: 1180 CKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAMILLEPLDKKLW---I 1236

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
             T  +LV   C + K   A L    LL +    + +T
Sbjct: 1237 RTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVT 1273


>gi|218196744|gb|EEC79171.1| hypothetical protein OsI_19856 [Oryza sativa Indica Group]
          Length = 633

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 123/448 (27%), Positives = 215/448 (47%), Gaps = 10/448 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI--RIDRIEKASK 173
           D      +     S  +   A  ++D MA     PD   C  L+ G+   R+ R + A +
Sbjct: 181 DAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAACTVLV-GVYACRLRRFDAAYE 239

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V++ MV +G  PD +TY+ ++ GLC  GQ+  A+ +LD M   GC+P+  TY  I+    
Sbjct: 240 VVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYC 299

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             G+  +A       +  G  P   TY +L+E +CK         +L++   +G +PD++
Sbjct: 300 TGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVI 359

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY+S ++  CK G+ D +  +++ +LS G++P+ +T N LL  +       A  ++L+  
Sbjct: 360 TYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECS 419

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E      V  YN ++  LC        +  F  M  K   P+  T+N V+ +LCK G L
Sbjct: 420 AELGWDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGRL 479

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           ++AL    LL        +ITYNTLI  L+  G   +  +L  QM+E GI+P+DIT+  +
Sbjct: 480 HKALC---LLRSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLV 536

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I   CR ++   A+    +     +    SA+  +I GL     +     ++  ++   +
Sbjct: 537 IDCLCREEKFLVALCCFYQ--SLEDDFFPSAFLSIIRGLIVGGMLGQLHTLIGCVLGQGF 594

Query: 534 KPDDTVFSTIVKKVADDGMTE--EAYKL 559
             +  ++  ++K +  +G  +  E YK+
Sbjct: 595 IIEVYIYQELIKALCKNGYCQSVEMYKV 622



 Score =  151 bits (381), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 100/367 (27%), Positives = 171/367 (46%), Gaps = 5/367 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T + ++   CS G++ +A  ++D+M      P+ H    ++       RI +A 
Sbjct: 249 VAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAK 308

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M+ SG  P T TYN++V  LCK G      ALL+E +  G  PDVITY++ +  +
Sbjct: 309 RLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGL 368

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+  ++       L  G  P  +T  IL++ VC+      A  +L+  A  G   ++
Sbjct: 369 CKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLECSAELGWDANV 428

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V YN+++   C + ++   V +  ++  +G+ PNS T+N ++HSL   G    + K L +
Sbjct: 429 VNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLG---RLHKALCL 485

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +       TV TYN LI  L   G  +       QM+     P+ +TY+ V+  LC+E  
Sbjct: 486 LRSKEFVATVITYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSLVIDCLCREEK 545

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
              AL   +        P    + ++I GL   G + +   L G ++  G   +   ++ 
Sbjct: 546 FLVALCCFYQSLEDDFFPS--AFLSIIRGLIVGGMLGQLHTLIGCVLGQGFIIEVYIYQE 603

Query: 473 LIWGFCR 479
           LI   C+
Sbjct: 604 LIKALCK 610



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 96/362 (26%), Positives = 174/362 (48%), Gaps = 6/362 (1%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN--GKFKQAI 242
           PD   +  +   L    +  +A+A+LD M+  G  PD     T+L  ++     +F  A 
Sbjct: 180 PDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAA-CTVLVGVYACRLRRFDAAY 238

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +  +  G  P ++TY+ LI  +C    +A A+ VLD M  EGC P+  TY  +V+  
Sbjct: 239 EVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAY 298

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C  G+  +A  ++N +++ G  P++ TYN L+ +L   G ++ VD +L+       +P V
Sbjct: 299 CTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDV 358

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TY+  ++GLCK G +D++    ++M+S   QP  VT N +L  +C+      A +LL  
Sbjct: 359 ITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLNILLDGVCRSSTAWAAKRLLEC 418

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
                    ++ YNT++  L  +      + L+  M + GI+P+  T   ++   C+  +
Sbjct: 419 SAELGWDANVVNYNTVMRRLCDERRWLSVVKLFTDMAKKGIAPNSWTFNIVVHSLCKLGR 478

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           + +A+ LL+        +    Y  +I  L  S + +    +L  MI     P+D  +S 
Sbjct: 479 LHKALCLLRSKEFVATVI---TYNTLIRHLSISGEGNEVCLLLYQMIEGGIAPNDITYSL 535

Query: 543 IV 544
           ++
Sbjct: 536 VI 537



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 75/297 (25%), Positives = 149/297 (50%), Gaps = 8/297 (2%)

Query: 272 GIARAIEVLDDM-AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
           G  RA+ +LD+M A+    PD   + ++        +   A+ V++ + + G+ P++   
Sbjct: 161 GADRALHLLDEMRALLRRRPDAACFTTVAAALSSASRPGAALAVLDAMAADGVAPDAAAC 220

Query: 331 NTLLHSLGSRGC----WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
             L+   G   C    +DA  +++  M     +P V TY+ LI+GLC  G V  A+   +
Sbjct: 221 TVLV---GVYACRLRRFDAAYEVVRWMVANGVAPDVVTYSTLISGLCSAGQVAEALGVLD 277

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
            M+ + CQP+  TY  ++ A C  G ++EA +LL+ +  S  +P   TYN L++ L K G
Sbjct: 278 LMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMIASGFAPSTATYNVLVEALCKVG 337

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
             E+   L  +    G +PD IT+ + + G C+A +++++  L+ ++   G +       
Sbjct: 338 AFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRIDKSFALVDKMLSNGLQPSEVTLN 397

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +++ G+C+S     A ++LE      +  +   ++T+++++ D+       KL+  +
Sbjct: 398 ILLDGVCRSSTAWAAKRLLECSAELGWDANVVNYNTVMRRLCDERRWLSVVKLFTDM 454



 Score = 81.3 bits (199), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 50/250 (20%), Positives = 107/250 (42%), Gaps = 5/250 (2%)

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS----HSPTVFTYNILINGLCKY 375
           +R   P+   YN L+ +          D+ L +++E        P    +  +   L   
Sbjct: 136 TRPRSPHPYDYNRLMSAHAGTRDGAGADRALHLLDEMRALLRRRPDAACFTTVAAALSSA 195

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL-CKEGMLNEALQLLHLLNGSSCSPCLIT 434
                A+   + M +    PD      ++G   C+    + A +++  +  +  +P ++T
Sbjct: 196 SRPGAALAVLDAMAADGVAPDAAACTVLVGVYACRLRRFDAAYEVVRWMVANGVAPDVVT 255

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y+TLI GL   G + +A+ +   M+E G  P+  T+  ++  +C   ++ EA  LL  + 
Sbjct: 256 YSTLISGLCSAGQVAEALGVLDLMLEEGCQPNAHTYTPIVHAYCTGGRIHEAKRLLNTMI 315

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
             G     + Y +++  LCK    +    +LE   +  + PD   +S+ +  +   G  +
Sbjct: 316 ASGFAPSTATYNVLVEALCKVGAFEEVDALLEESTAKGWTPDVITYSSYMDGLCKAGRID 375

Query: 555 EAYKLWQKLI 564
           +++ L  K++
Sbjct: 376 KSFALVDKML 385


>gi|357447159|ref|XP_003593855.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355482903|gb|AES64106.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 790

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 128/448 (28%), Positives = 217/448 (48%), Gaps = 3/448 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  + N +++ +C   ++ DA +LI  M  +   PD      ++  L +  ++E+  
Sbjct: 298 IEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVK 357

Query: 173 KVLQIMVM-SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           ++++ MV  S  +PD +TYN ++  L K G    A+  L E    G   D + Y+ ++ +
Sbjct: 358 RLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHIDKVGYSAVVDS 417

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
              N    +A     D   KGC P ++TYT +I+  C+   I  A ++L  M   GC P+
Sbjct: 418 FCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQQMYKHGCKPN 477

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            VTY  L+N  C  GK  +A  +IN        PN+ITY+ ++H L   G       +  
Sbjct: 478 TVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREGKLSEACDLTR 537

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M E    P     N+LI  LC+   V  A     + + K C  ++V + +V+   C+ G
Sbjct: 538 EMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFTSVIYGFCQIG 597

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L+ AL +L  +  S+  P  ITY TL D L KK  +++A  L  +M+  GI P  +T+R
Sbjct: 598 DLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGKGIDPTPVTYR 657

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
            +I  FC+  +V++ + LL+++  R  +   + Y  VI  LC     + A ++L  ++ +
Sbjct: 658 AVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEAEKLLGKVLRT 715

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKL 559
             K D      +++    DG    AYK+
Sbjct: 716 ASKLDAKTCHILIESYLIDGNALSAYKV 743



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 114/430 (26%), Positives = 205/430 (47%), Gaps = 1/430 (0%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A +++ +M RR           ++    R   +  A ++L +M  +G  PD    N  + 
Sbjct: 216 ARRILRLMTRRGIERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIY 275

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPP 255
            L K  ++  A+  L+ M V+G EPD+++YN +++   D  +   A+    +   KGCPP
Sbjct: 276 VLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPP 335

Query: 256 YLITYTILIEQVCKQCGIARAIEVLDDMAIEG-CSPDIVTYNSLVNFSCKQGKYDDAVLV 314
             ++Y  ++  +CK   +     ++++M       PD VTYN+L+    K G  DDA++ 
Sbjct: 336 DKVSYYTVMAFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVF 395

Query: 315 INNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK 374
           +     +G   + + Y+ ++ S       D    ++  M     +P V TY  +I+G C+
Sbjct: 396 LREAEEKGFHIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCR 455

Query: 375 YGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLIT 434
            G +D A     QM    C+P+ VTY  +L  LC  G   EA +++++      +P  IT
Sbjct: 456 VGKIDEAKKMLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAIT 515

Query: 435 YNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
           Y+ ++ GL ++G + +A  L  +M+E G  P+ +    LI   CR   V  A   L+E  
Sbjct: 516 YSAVMHGLRREGKLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECL 575

Query: 495 KRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
            +G  +    +  VI+G C+   +D A+ +LE M  S   PD   ++T+   +      +
Sbjct: 576 HKGCAVNVVNFTSVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLD 635

Query: 555 EAYKLWQKLI 564
           EA +L  K++
Sbjct: 636 EASELIVKML 645



 Score =  179 bits (455), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 127/488 (26%), Positives = 233/488 (47%), Gaps = 38/488 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E   +  + ++ ++   G L +A +++ +M +    PD   C   I  L++ +++EKA 
Sbjct: 228 IERSPEAFSYVMVSYSRAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKAL 287

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           + L+ M ++G  PD ++YN ++ G C   +I  A+ L+ EM   GC PD ++Y T++  +
Sbjct: 288 RFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFL 347

Query: 233 FDNGKFKQAIGFWKDQLRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
             + K ++     ++ ++     P  +TY  LI  + K      A+  L +   +G   D
Sbjct: 348 CKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGFHID 407

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            V Y+++V+  CK    D A  ++ ++ S+G  P+ +TY  ++      G  D   K+L 
Sbjct: 408 KVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKKMLQ 467

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M +    P   TY +L+NGLC  G    A    N        P+ +TY+ V+  L +EG
Sbjct: 468 QMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREMINVSEEHWWTPNAITYSAVMHGLRREG 527

Query: 412 MLNEALQL---------------LHLLNGSSC------------SPCL--------ITYN 436
            L+EA  L               ++LL  S C              CL        + + 
Sbjct: 528 KLSEACDLTREMIEKGFLPNPVDINLLIQSLCRNQNVVGAKKYLEECLHKGCAVNVVNFT 587

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
           ++I G  + G ++ A+ +   M  +   PD IT+ TL     +  +++EA +L+ ++  +
Sbjct: 588 SVIYGFCQIGDLDAALSMLEDMYLSNKHPDAITYTTLFDALGKKSRLDEASELIVKMLGK 647

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G       YR VIH  C+  +VD  +++LE MI+   +P  TV++ +++K+   G  EEA
Sbjct: 648 GIDPTPVTYRAVIHRFCQWGRVDDMMKLLEKMIAR--QPFKTVYNQVIEKLCYFGNREEA 705

Query: 557 YKLWQKLI 564
            KL  K++
Sbjct: 706 EKLLGKVL 713



 Score =  127 bits (319), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 88/336 (26%), Positives = 168/336 (50%), Gaps = 7/336 (2%)

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL-IEQVCKQC-GIARAIEVLDDMA 284
            +LR+  D+ +      +W D+  +     ++ YT+L I    + C G  R + ++    
Sbjct: 169 AVLRSQ-DDERIALDFFYWADRQWRYRHDAIVYYTMLDILSKTRLCQGARRILRLMTRRG 227

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
           IE  SP+  +Y  +V++S + G   +A+ ++  +   G+EP+    NT ++ L      +
Sbjct: 228 IER-SPEAFSY-VMVSYS-RAGMLRNALRILTLMQKAGVEPDLSICNTAIYVLVKGNKLE 284

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
              + L+ M  A   P + +YN LI G C    +D A+    +M  K C PD V+Y TV+
Sbjct: 285 KALRFLERMKVAGIEPDIVSYNCLIKGYCDVHRIDDALELIAEMPFKGCPPDKVSYYTVM 344

Query: 405 GALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
             LCK+  + E  +L+ +++  S+  P  +TYNTLI  L+K G  + A+V   +  E G 
Sbjct: 345 AFLCKDRKVEEVKRLMENMVQNSNLIPDQVTYNTLIYALSKHGHADDALVFLREAEEKGF 404

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
             D + +  ++  FC+   +++A  L+ ++  +G       Y  +I G C+  K+D A +
Sbjct: 405 HIDKVGYSAVVDSFCKNKNIDKAKSLVIDMYSKGCNPDVVTYTAIIDGFCRVGKIDEAKK 464

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +L+ M     KP+   ++ ++  +  +G + EA ++
Sbjct: 465 MLQQMYKHGCKPNTVTYTVLLNGLCHNGKSLEAREM 500



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 39/172 (22%), Positives = 82/172 (47%), Gaps = 4/172 (2%)

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLN--GSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
           D + Y T+L  L K  +   A ++L L+   G   SP   +Y  ++   ++ G +  A+ 
Sbjct: 196 DAIVYYTMLDILSKTRLCQGARRILRLMTRRGIERSPEAFSY--VMVSYSRAGMLRNALR 253

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           +   M + G+ PD     T I+   + +++E+A+  L+ +   G +    +Y  +I G C
Sbjct: 254 ILTLMQKAGVEPDLSICNTAIYVLVKGNKLEKALRFLERMKVAGIEPDIVSYNCLIKGYC 313

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              ++D A++++  M      PD   + T++  +  D   EE  +L + +++
Sbjct: 314 DVHRIDDALELIAEMPFKGCPPDKVSYYTVMAFLCKDRKVEEVKRLMENMVQ 365


>gi|302763305|ref|XP_002965074.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
 gi|300167307|gb|EFJ33912.1| hypothetical protein SELMODRAFT_83127 [Selaginella moellendorffii]
          Length = 484

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 203/388 (52%), Gaps = 10/388 (2%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR---TMFDNGKFKQAI 242
           D   Y  ++  L +  + R A+        + C P + ++  I++    + + G+  + +
Sbjct: 43  DVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYL 102

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G+ +     G PP +  Y ++++  C    + RA+     M  + C P++ TYN+++N  
Sbjct: 103 GYMRSL---GIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMG-KTCKPNVATYNTVINGL 158

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK GK D AV +   L    ++P+  TY+TL+H L      +A  K+ D+M EA++    
Sbjct: 159 CKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDA 218

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEALQLLH 421
             YN + +G CK   VD A+     M+ + C+P +VTYN ++  +C+ +  + EA +L  
Sbjct: 219 GAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIINGVCQYKNRIEEAYRLFQ 278

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            + GS C P  +TY T+I GL+K   +++ + L+  M + G+SPD   + +LI+ F +  
Sbjct: 279 QMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVR 338

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK--VDMAIQVLELMISSRYKPDDTV 539
           +++EA  +L++  +         Y  +I G C+++K  VD A+ + + M   R  P+   
Sbjct: 339 KLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVIT 398

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           ++ +++ +   G  +EAY+++Q++ + K
Sbjct: 399 YNIVLRGLCKTGRFDEAYQIFQEMFKVK 426



 Score =  162 bits (411), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 112/416 (26%), Positives = 194/416 (46%), Gaps = 7/416 (1%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           L  A K  D  +++       +C   L+  L+R  R  +A +  +  + +   P   ++ 
Sbjct: 24  LALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFT 83

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA-IGFWKDQLR 250
           +++   C       A   L  M   G  PDV  YN +L+   D G+  +A I F K  + 
Sbjct: 84  IIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGK--MG 141

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           K C P + TY  +I  +CK   I  A+ +   +  +   PD  TY++LV+  C+  + + 
Sbjct: 142 KTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEA 201

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ V + +L    + ++  YN +          D   ++L  M +    P+V TYN +IN
Sbjct: 202 AIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRCKPSVVTYNCIIN 261

Query: 371 GLCKY-GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           G+C+Y   ++ A   F QMV  +C P+ VTY T++  L K   +   L+L   ++ +  S
Sbjct: 262 GVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLS 321

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA--DQVEEAV 487
           P    Y++LI    K   +++A  +      N + PD   + TLI G+CRA   +V+EA+
Sbjct: 322 PDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEAL 381

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            L + +  R        Y +V+ GLCK+ + D A Q+ + M   +  P+   F  +
Sbjct: 382 LLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVM 437



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 108/477 (22%), Positives = 220/477 (46%), Gaps = 12/477 (2%)

Query: 84  VLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIM 143
           V +V +++  L + +K  D S   S      +D     ++L +     +  +A +     
Sbjct: 14  VGSVIRRVPSLALARKFFDWS---SKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRE 70

Query: 144 ARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
              +  P  +    +I+    +    +A + L  M   G  PD   YN+++ G C  G++
Sbjct: 71  LCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRV 130

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A+    +M  + C+P+V TYNT++  +   GK   A+  +         P   TY+ L
Sbjct: 131 GRALIKFGKMGKT-CKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTL 189

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           +  +C+   +  AI+V D M       D   YN++ +  CK+ + D+A+ V+  ++ R  
Sbjct: 190 VHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRRC 249

Query: 324 EPNSITYNTLLHSLGS-RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +P+ +TYN +++ +   +   +   ++   M  +   P   TY  +I GL K   V R +
Sbjct: 250 KPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCL 309

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             F  M      PD   Y++++ A  K   L+EA  +L     +   P +  Y TLI G 
Sbjct: 310 ELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGY 369

Query: 443 --AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
             A+K  +++A++L+  M +  + P+ IT+  ++ G C+  + +EA  + +E+ K     
Sbjct: 370 CRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSP 429

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQV-LELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
               ++++  G+   +K D   ++ ++++   R++ +      I+++    G+T+EA
Sbjct: 430 NRMTFKVMTMGMIHCRKTDKFERIFMDMVYKGRWQGE----GPILEQHGLIGVTDEA 482


>gi|302757477|ref|XP_002962162.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
 gi|300170821|gb|EFJ37422.1| hypothetical protein SELMODRAFT_76220 [Selaginella moellendorffii]
          Length = 484

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 104/388 (26%), Positives = 203/388 (52%), Gaps = 10/388 (2%)

Query: 186 DTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR---TMFDNGKFKQAI 242
           D   Y  ++  L +  + R A+        + C P + ++  I++    + + G+  + +
Sbjct: 43  DVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFTIIIQCFCNVRNPGRAWRYL 102

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
           G+ +     G PP +  Y ++++  C    + RA+     M  + C P++ TYN+++N  
Sbjct: 103 GYMRSL---GIPPDVTAYNVVLKGYCDLGRVGRALIKFGKMG-KTCKPNVATYNTVINGL 158

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK GK D AV +   L    ++P+  TY+TL+H L      +A  K+ D+M EA++    
Sbjct: 159 CKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDA 218

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEALQLLH 421
             YN + +G CK   VD A+     M+ + C+P +VTYN ++  +C+ +  + EA +L  
Sbjct: 219 GAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQ 278

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            + GS C P  +TY T+I GL+K   +++ + L+  M + G+SPD   + +LI+ F +  
Sbjct: 279 QMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVR 338

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK--VDMAIQVLELMISSRYKPDDTV 539
           +++EA  +L++  +         Y  +I G C+++K  VD A+ + + M   R  P+   
Sbjct: 339 KLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVIT 398

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           ++ +++ +   G  +EAY+++Q++ + K
Sbjct: 399 YNIVLRGLCKTGRFDEAYQIFQEMFKVK 426



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 204/437 (46%), Gaps = 7/437 (1%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYN 191
           L  A K  D  +++       +C   L+  L+R  R  +A +  +  + +   P   ++ 
Sbjct: 24  LALARKFFDWSSKQEGYRHDVYCYTRLLHHLVRARRTREAVRFFKRELCAHCRPSLYSFT 83

Query: 192 MMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA-IGFWKDQLR 250
           +++   C       A   L  M   G  PDV  YN +L+   D G+  +A I F K  + 
Sbjct: 84  IIIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRALIKFGK--MG 141

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDD 310
           K C P + TY  +I  +CK   I  A+ +   +  +   PD  TY++LV+  C+  + + 
Sbjct: 142 KTCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEA 201

Query: 311 AVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILIN 370
           A+ V + +L    + ++  YN +          D   ++L  M +    P+V TYN +IN
Sbjct: 202 AIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIIN 261

Query: 371 GLCKY-GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           G+C+Y   ++ A   F QMV  +C P+ VTY T++  L K   +   L+L   ++ +  S
Sbjct: 262 GVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLS 321

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA--DQVEEAV 487
           P    Y++LI    K   +++A  +      N + PD   + TLI G+CRA   +V+EA+
Sbjct: 322 PDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDEAL 381

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
            L + +  R        Y +V+ GLCK+ + D A Q+ + M   +  P+   F  +   +
Sbjct: 382 LLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTMGM 441

Query: 548 ADDGMTEEAYKLWQKLI 564
              G T++  +++  ++
Sbjct: 442 IHCGKTDKFERIFMDMV 458



 Score =  135 bits (339), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 94/383 (24%), Positives = 181/383 (47%), Gaps = 12/383 (3%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+Q FC+      A + +  M      PD      +++G   + R+ +A  +++   M  
Sbjct: 85  IIQCFCNVRNPGRAWRYLGYMRSLGIPPDVTAYNVVLKGYCDLGRVGRA--LIKFGKMGK 142

Query: 183 GV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
              P+  TYN ++ GLCK G+I  A+ L   +     +PD  TY+T++  +    + + A
Sbjct: 143 TCKPNVATYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAA 202

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           I  +   L          Y  + +  CK+  +  A+EVL  M   GC P +VTYN ++N 
Sbjct: 203 IKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIING 262

Query: 302 SCK-QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI---MNEAS 357
            C+ + + ++A  +   ++     PN++TY T++  LG    ++ V + L++   M++A 
Sbjct: 263 VCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMI--LGLSKIYE-VQRCLELFKGMSKAG 319

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC--KEGMLNE 415
            SP  + Y+ LI    K   +D A +        +  PD+  Y T++   C  ++  ++E
Sbjct: 320 LSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGYCRARKPRVDE 379

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           AL L   +      P +ITYN ++ GL K G  ++A  ++ +M +   SP+ +T + +  
Sbjct: 380 ALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVMTM 439

Query: 476 GFCRADQVEEAVDLLKEIGKRGN 498
           G     + ++   +  ++  +G 
Sbjct: 440 GMIHCGKTDKFERIFMDMVYKGR 462



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 85/289 (29%), Positives = 136/289 (47%), Gaps = 5/289 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  GK+  A  L   +      PD      L+ GL + +R+E A KV  +M
Sbjct: 150 TYNTVINGLCKFGKIDWAVHLFTRLPHDLVDPDGFTYSTLVHGLCQAERLEAAIKVYDMM 209

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD-NGK 237
           + +    D   YN M  G CK  ++  A+ +L  M   GC+P V+TYN I+  +     +
Sbjct: 210 LEANYDGDAGAYNAMADGFCKERRVDEALEVLKTMIQRGCKPSVVTYNCIINGVCQYKNR 269

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A   ++  +   CPP  +TY  +I  + K   + R +E+   M+  G SPD   Y+S
Sbjct: 270 IEEAYRLFQQMVGSDCPPNAVTYGTMILGLSKIYEVQRCLELFKGMSKAGLSPDGYAYHS 329

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI---MN 354
           L+    K  K D+A  ++ +     + P+   Y TL+     R     VD+ L +   M 
Sbjct: 330 LIYAFVKVRKLDEAKSILQDAARNHVGPDVYMYTTLISGY-CRARKPRVDEALLLFQNMK 388

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           +    P V TYNI++ GLCK G  D A   F +M    C P+ +T+  +
Sbjct: 389 DRRVWPNVITYNIVLRGLCKTGRFDEAYQIFQEMFKVKCSPNRMTFKVM 437



 Score =  120 bits (302), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 78/282 (27%), Positives = 133/282 (47%), Gaps = 3/282 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T + ++   C   +L  A K+ D+M   N   D      +  G  +  R+++A 
Sbjct: 179 VDPDGFTYSTLVHGLCQAERLEAAIKVYDMMLEANYDGDAGAYNAMADGFCKERRVDEAL 238

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCK-RGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
           +VL+ M+  G  P  +TYN ++ G+C+ + +I  A  L  +M  S C P+ +TY T++  
Sbjct: 239 EVLKTMIQRGCKPSVVTYNCIINGVCQYKNRIEEAYRLFQQMVGSDCPPNAVTYGTMILG 298

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +    + ++ +  +K   + G  P    Y  LI    K   +  A  +L D A     PD
Sbjct: 299 LSKIYEVQRCLELFKGMSKAGLSPDGYAYHSLIYAFVKVRKLDEAKSILQDAARNHVGPD 358

Query: 292 IVTYNSLVNFSCKQGK--YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           +  Y +L++  C+  K   D+A+L+  N+  R + PN ITYN +L  L   G +D   +I
Sbjct: 359 VYMYTTLISGYCRARKPRVDEALLLFQNMKDRRVWPNVITYNIVLRGLCKTGRFDEAYQI 418

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
              M +   SP   T+ ++  G+   G  D+    F  MV K
Sbjct: 419 FQEMFKVKCSPNRMTFKVMTMGMIHCGKTDKFERIFMDMVYK 460


>gi|449522636|ref|XP_004168332.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g09680-like [Cucumis sativus]
          Length = 590

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 121/445 (27%), Positives = 212/445 (47%), Gaps = 13/445 (2%)

Query: 125 QNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI-RIDRIEKASKVLQIMVMSGG 183
           Q++C+      A ++            F  C ++IR L+ R  +   AS    I+  +G 
Sbjct: 102 QSYCAMANFLSAHQM------------FQECQSIIRFLVSRKGKDSAASVFAAILDTAGT 149

Query: 184 VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIG 243
                 ++ ++      G +  AI     +  S  +        +L  M ++        
Sbjct: 150 RCSNFVFDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWT 209

Query: 244 FWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSC 303
           F+ + L  G PP +  Y ILI + CK+  I  A  + +++   G  P  V++N+L+N  C
Sbjct: 210 FYSEILEYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLC 269

Query: 304 KQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVF 363
           K    D+   +   +    + P+  TY+ L+H L   G  D  +++ D M +    P   
Sbjct: 270 KSRNLDEGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGI 329

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           T+  LI+G  +   +D A+N+++QM++   +PD+V YNT+L  LCK G +N+A +L+  +
Sbjct: 330 TFTALIDGQYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEM 389

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
                 P  ITY TLIDG  K+G +E AM +   M E G+  D++    LI GFCR  +V
Sbjct: 390 KMVGMKPDKITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRV 449

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
            +A   L+E+ + G K  ++ Y +VI G CK   V M  ++L+ M  + +KP    ++ +
Sbjct: 450 RDAERTLREMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVL 509

Query: 544 VKKVADDGMTEEAYKLWQKLIEWKV 568
           +  +   G  + A  L + ++   V
Sbjct: 510 MNGLCKQGQMKNANMLLEAMLNLGV 534



 Score =  172 bits (435), Expect = 6e-40,   Method: Compositional matrix adjust.
 Identities = 102/345 (29%), Positives = 168/345 (48%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P   +   LI    +   I  A  +   +   G  P T+++N ++ GLCK   +     L
Sbjct: 221 PKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRL 280

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
              M  +   PDV TY+ ++  +   G+   A   + +  ++G  P  IT+T LI+   +
Sbjct: 281 KKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYR 340

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              +  A+     M   G  PD+V YN+L+N  CK G  + A  +++ +   GM+P+ IT
Sbjct: 341 SRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKIT 400

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           Y TL+      G  ++  +I   MNE         +  LI+G C+ G V  A  +  +MV
Sbjct: 401 YTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMV 460

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
               +PD  TY  V+   CK+G +    +LL  +  +   P +ITYN L++GL K+G M+
Sbjct: 461 EAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMK 520

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIG 494
            A +L   M+  G++PDDIT+  L+ G C+  + E+ + L  E G
Sbjct: 521 NANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRNEKG 565



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 96/343 (27%), Positives = 166/343 (48%)

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           G  P V  YN ++      G  + A   + +  ++G  P  +++  LI  +CK   +   
Sbjct: 218 GFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEG 277

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
             +   M      PD+ TY+ L++  CK+G+ D A  + + +  RG+ PN IT+  L+  
Sbjct: 278 FRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDG 337

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
                  D+       M      P +  YN L+NGLCK G V++A    ++M     +PD
Sbjct: 338 QYRSRRMDSAMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPD 397

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            +TY T++   CKEG L  A+++   +N        + +  LI G  + G +  A     
Sbjct: 398 KITYTTLIDGYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLR 457

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           +M+E G+ PDD T+  +I G+C+   V+    LLKE+   G+K     Y ++++GLCK  
Sbjct: 458 EMVEAGMKPDDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQG 517

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           ++  A  +LE M++    PDD  ++ +++    +G  E+  KL
Sbjct: 518 QMKNANMLLEAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKL 560



 Score =  164 bits (414), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 96/354 (27%), Positives = 173/354 (48%), Gaps = 3/354 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  G + DA  + + + +R   P       LI GL +   +++  ++ + M  
Sbjct: 227 NILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLDEGFRLKKTMEE 286

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +   PD  TY++++ GLCK G++  A  L DEM   G  P+ IT+  ++   + + +   
Sbjct: 287 NRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDS 346

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +   L  G  P L+ Y  L+  +CK   + +A +++D+M + G  PD +TY +L++
Sbjct: 347 AMNTYHQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLID 406

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK+G  + A+ +   +   G+  +++ +  L+      G     ++ L  M EA   P
Sbjct: 407 GYCKEGDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKP 466

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              TY ++I+G CK G V        +M     +P ++TYN ++  LCK+G +  A  LL
Sbjct: 467 DDATYTMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLL 526

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
             +     +P  ITYN L++G  K G  E  + L     E G+  D   + +L+
Sbjct: 527 EAMLNLGVTPDDITYNILLEGHCKNGKAEDLLKLRN---EKGLIVDYAYYTSLV 577



 Score =  130 bits (326), Expect = 3e-27,   Method: Compositional matrix adjust.
 Identities = 80/261 (30%), Positives = 123/261 (47%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++   C  G+L  A +L D M +R   P+      LI G  R  R++ A    
Sbjct: 292 DVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTALIDGQYRSRRMDSAMNTY 351

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+  G  PD + YN ++ GLCK G +  A  L+DEM + G +PD ITY T++      
Sbjct: 352 HQMLTMGVKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKE 411

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  + A+   K    +G     + +T LI   C+   +  A   L +M   G  PD  TY
Sbjct: 412 GDLESAMEIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATY 471

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             +++  CK+G       ++  +   G +P  ITYN L++ L  +G     + +L+ M  
Sbjct: 472 TMVIDGYCKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLN 531

Query: 356 ASHSPTVFTYNILINGLCKYG 376
              +P   TYNIL+ G CK G
Sbjct: 532 LGVTPDDITYNILLEGHCKNG 552



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 63/204 (30%), Positives = 97/204 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D    N +L   C  G +  A KL+D M      PD      LI G  +   +E A 
Sbjct: 359 VKPDLVMYNTLLNGLCKVGDVNKARKLVDEMKMVGMKPDKITYTTLIDGYCKEGDLESAM 418

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ + M   G V D + +  ++ G C+ G++R A   L EM  +G +PD  TY  ++   
Sbjct: 419 EIRKGMNEEGVVLDNVAFTALISGFCRDGRVRDAERTLREMVEAGMKPDDATYTMVIDGY 478

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G  K      K+    G  P +ITY +L+  +CKQ  +  A  +L+ M   G +PD 
Sbjct: 479 CKKGNVKMGFKLLKEMQINGHKPGVITYNVLMNGLCKQGQMKNANMLLEAMLNLGVTPDD 538

Query: 293 VTYNSLVNFSCKQGKYDDAVLVIN 316
           +TYN L+   CK GK +D + + N
Sbjct: 539 ITYNILLEGHCKNGKAEDLLKLRN 562



 Score = 68.6 bits (166), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 40/178 (22%), Positives = 83/178 (46%)

Query: 400 YNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM 459
           ++ ++ A    G +++A+Q   L+  S+          L+D +            Y +++
Sbjct: 156 FDALMIAYWDSGFVSDAIQCFRLVRNSNFQIPFHGCGYLLDKMINSNSPVTIWTFYSEIL 215

Query: 460 ENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           E G  P    +  LI  FC+   + +A  +  EI KRG +    ++  +I+GLCKS+ +D
Sbjct: 216 EYGFPPKVQYYNILINKFCKEGSIRDAKLIFNEIRKRGLRPTTVSFNTLINGLCKSRNLD 275

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTLLA 577
              ++ + M  +R  PD   +S ++  +  +G  + A +L+ ++ +  +   G T  A
Sbjct: 276 EGFRLKKTMEENRIYPDVFTYSVLIHGLCKEGRLDVAEQLFDEMQQRGLRPNGITFTA 333


>gi|115482590|ref|NP_001064888.1| Os10g0484300 [Oryza sativa Japonica Group]
 gi|22094354|gb|AAM91881.1| putative membrane-associated salt-inducible protein [Oryza sativa
           Japonica Group]
 gi|31432736|gb|AAP54334.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|78708824|gb|ABB47799.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
 gi|113639497|dbj|BAF26802.1| Os10g0484300 [Oryza sativa Japonica Group]
          Length = 578

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 193/403 (47%), Gaps = 8/403 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+ GL+   R++ A K  +  +     PD  T+N ++ GLC+ GQ+R A  +  ++   G
Sbjct: 162 LLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWG 221

Query: 218 CEPDVITYNTILRTMFDNG---KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             P V TYN+++      G            K+ +  G  P  +T+ +LI   CK    A
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+ V ++M  +G +  +VTYNSL++  C +GK ++ V ++  +   G+ PN IT+  +L
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                +G     +  +D M E +  P V  YNILI+   + G ++ A+     M  K   
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P++ TYN ++    + G    A  LL  +        ++TYN LI  L  KG + KA+ L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             +M E G+ P+ +T+ T+I GFC    ++ A ++   + K   +     Y + I   C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
             K+D A  +L  M+     P+   + TI      +GM E+ Y
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEKGY 559



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 186/376 (49%), Gaps = 3/376 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L       ++  A K      RR   PD +    +I GL RI ++ KA  V + +  
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 181 SGGVPDTITYNMMVGGLCKR---GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            G  P   TYN ++ G CK+   G +     LL EM  +G  P  +T+  ++     N  
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A+  +++  ++G    ++TY  LI  +C +  +   ++++++M   G SP+ +T+  
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++   CK+G   DA   I+ +  R +EP+ + YN L+      G  +    + + M +  
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP V TYN LI G  + G    A    ++M  K  + D+VTYN ++GALC +G + +A+
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL  ++     P  +TYNT+I G   KG ++ A  +  +M +     + +T+   I  F
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519

Query: 478 CRADQVEEAVDLLKEI 493
           C+  +++EA DLL E+
Sbjct: 520 CQIGKMDEANDLLNEM 535



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 183/393 (46%), Gaps = 3/393 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P T + N ++ GL    ++  A             PD+ T+NT++  +   G+ ++A   
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPDIVTYNSLVNF 301
            KD    G  P + TY  LI+  CK+ G      V   L +M   G SP  VT+  L+N 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK      AV V   +  +G+  + +TYN+L+  L S G  +   K+++ M +   SP 
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             T+  ++ G CK G++  A +  + M  +N +PD+V YN ++    + G + +A+ +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +     SP + TYN LI G ++ G    A  L  +M E GI  D +T+  LI   C   
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V +AV LL E+ + G +  +  Y  +I G C    +  A ++   M   R + +   ++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             +K     G  +EA  L  ++++  +   G T
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 145/294 (49%), Gaps = 5/294 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C       A ++ + M ++          +LI GL    ++E+  K+++ M   G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ IT+  ++ G CK+G +  A   +D M+    EPDV+ YN ++      GK + A+
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +   +KG  P + TY  LI    +      A  +LD+M  +G   D+VTYN L+   
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +G+   AV +++ +   G+EPN +TYNT++     +G   +  +I   M +      V
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANV 509

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            TYN+ I   C+ G +D A +  N+M+ K   P+ +TY T+     KEGM+ + 
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEKG 558



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 122/231 (52%), Gaps = 10/231 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCINLIRGLIRIDRIEKAS 172
           +E T   +L+ FC +G + DA+  ID M  RN  PD   ++  I++ R   R+ ++E A 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYR---RLGKMEDAM 389

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V + M   G  P+  TYN ++ G  + G  RSA  LLDEM   G E DV+TYN ++  +
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC--SP 290
              G+ ++A+    +    G  P  +TY  +I+  C +  I  A E+   M  E C    
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM--EKCRKRA 507

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           ++VTYN  + + C+ GK D+A  ++N +L + + PN ITY T+   +  +G
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  115 bits (287), Expect = 8e-23,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 3/202 (1%)

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
           H P+  + N L+ GL     VD A  +F   + +   PDI T+NTV+  LC+ G L +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGC---MEKAMVLYGQMMENGISPDDITHRTLI 474
            +   +     +P + TYN+LIDG  KKG    M    +L  +M+E GISP  +T   LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C+      AV + +E+ ++G       Y  +I GLC   KV+  ++++E M      
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 535 PDDTVFSTIVKKVADDGMTEEA 556
           P++  F  ++K     GM  +A
Sbjct: 332 PNEITFGCVLKGFCKKGMMADA 353



 Score = 94.7 bits (234), Expect = 1e-16,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 4/200 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D    N ++  +   GK+ DA  + + MA++   P+      LI G  R      AS
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  M   G   D +TYN+++G LC +G++R A+ LLDEMS  G EP+ +TYNTI++  
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484

Query: 233 FDNGKFKQA--IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            D G  K A  I    ++ RK     ++TY + I+  C+   +  A ++L++M  +   P
Sbjct: 485 CDKGNIKSAYEIRTRMEKCRKRA--NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542

Query: 291 DIVTYNSLVNFSCKQGKYDD 310
           + +TY ++     ++G   D
Sbjct: 543 NGITYETIKEGMMEKGYTPD 562


>gi|357161570|ref|XP_003579133.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g39710-like [Brachypodium distachyon]
          Length = 721

 Score =  189 bits (480), Expect = 3e-45,   Method: Compositional matrix adjust.
 Identities = 126/454 (27%), Positives = 226/454 (49%), Gaps = 3/454 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N +++  CS  ++ +A ++I +M +    PD      ++  L +  R+ +  
Sbjct: 227 VEPDVVTYNCLIKGLCSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVR 286

Query: 173 KVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +L  M    G+  D +TYNM++  L K G    A+  L E        D + Y+ ++ +
Sbjct: 287 SLLATMRNDAGLLTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHS 346

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
              NG+  +A     + + K C P ++TY+ +++  C+   I +A +++  M   GC P+
Sbjct: 347 FCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPN 406

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           IVT+ +L+N  CK GK  +A  ++N        P+ ITY+ ++H     G       ++ 
Sbjct: 407 IVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVA 466

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M +    PT    N+LI+ LCK G    A     Q  SK C  ++V + TV+    ++G
Sbjct: 467 QMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQG 526

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L  AL LL  L  S+  P ++TY  +++ L +KG +++A  L  +M+  G+ P  +T+R
Sbjct: 527 DLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYR 586

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           T+I  +C    VEE VDLL ++  R  +   S Y  VI  LC   K++ A  +L  ++ +
Sbjct: 587 TVIHRYCEKGTVEELVDLLDKMLAR--QELKSVYNQVIEKLCAFGKLNEAYGLLSKVLRT 644

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             + D      +++   + G+T +AY +  ++ +
Sbjct: 645 ASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQ 678



 Score =  182 bits (461), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 215/438 (49%), Gaps = 2/438 (0%)

Query: 129 SRGKLTD-ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           SR +L D A +++ +M RR          +L+    R  ++  A +VLQ+M   G  PD 
Sbjct: 137 SRTRLHDPARRVVRLMIRRGVRRGPRQFAHLMLSYSRAGKLRSAMRVLQLMQTDGCAPDI 196

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
              N+ V  L   G++  A+   D M   G EPDV+TYN +++ +    +  +A+     
Sbjct: 197 SICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGLCSVRRVVEALEMIGV 256

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQG 306
            L+ GCPP  I+Y  ++  +CK+  ++    +L  M  + G   D VTYN L++   K G
Sbjct: 257 MLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTDQVTYNMLIHVLAKHG 316

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             D+A+  +     +    + + Y+ ++HS    G      +I+  M      P V TY+
Sbjct: 317 HADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYS 376

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +++G C+ G +D+A      M    C+P+IVT+  +L  LCK G  +EA +LL+     
Sbjct: 377 AVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGED 436

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
             +P  ITY+ ++ G  ++G ++++  +  QM++ G  P  +    LI   C+  +  EA
Sbjct: 437 WWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEA 496

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            + +++   +G  +    +  VIHG  +   ++ A+ +L+ +  S   PD   ++ +V  
Sbjct: 497 KEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNA 556

Query: 547 VADDGMTEEAYKLWQKLI 564
           +   G  +EA  L +K++
Sbjct: 557 LGRKGRLKEATGLVEKML 574



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 126/523 (24%), Positives = 243/523 (46%), Gaps = 45/523 (8%)

Query: 83  HVLAVNKKLRGLTITKKSHDPS-----LPSSDGPFVENDEKTNNKILQNFCSRGKLTDAS 137
           H   V  ++ GL    + HDP+     L    G  V    +    ++ ++   GKL  A 
Sbjct: 124 HAPEVFDEMLGLLSRTRLHDPARRVVRLMIRRG--VRRGPRQFAHLMLSYSRAGKLRSAM 181

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           +++ +M      PD   C   +  L+   R++KA      M   G  PD +TYN ++ GL
Sbjct: 182 RVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIKGL 241

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVI---------------------------------- 223
           C   ++  A+ ++  M  +GC PD I                                  
Sbjct: 242 CSVRRVVEALEMIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGLLTD 301

Query: 224 --TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD 281
             TYN ++  +  +G   +A+ F ++   K      + Y+ ++   C    +A A E++ 
Sbjct: 302 QVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVG 361

Query: 282 DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           +M  + C PD+VTY+++V+  C+ G+ D A  ++ ++   G +PN +T+  LL+ L   G
Sbjct: 362 EMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVG 421

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
                 ++L+   E   +P+  TY+++++G  + G +  + +   QM+ K   P  V  N
Sbjct: 422 KSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEIN 481

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            ++ ALCKEG   EA + +       C+  ++ + T+I G +++G +E A+ L   +  +
Sbjct: 482 LLIHALCKEGKPAEAKEFMEQCQSKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLS 541

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
              PD +T+  ++    R  +++EA  L++++  RG       YR VIH  C+   V+  
Sbjct: 542 NRHPDVVTYTVVVNALGRKGRLKEATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEEL 601

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           + +L+ M++   +   +V++ +++K+   G   EAY L  K++
Sbjct: 602 VDLLDKMLAR--QELKSVYNQVIEKLCAFGKLNEAYGLLSKVL 642



 Score =  148 bits (373), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 91/362 (25%), Positives = 182/362 (50%), Gaps = 2/362 (0%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L  S+G     DE   + ++ +FC  G++ +A +++  M  +   PD      ++ G  R
Sbjct: 325 LRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKEIVGEMISKECHPDVVTYSAVVDGFCR 384

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           I  I++A K+++ M  +G  P+ +T+  ++ GLCK G+   A  LL++       P  IT
Sbjct: 385 IGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLCKVGKSSEAWELLNKSGEDWWTPSDIT 444

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y+ ++      GK K++       L+KG  P  +   +LI  +CK+   A A E ++   
Sbjct: 445 YSVVMHGFRREGKLKESCDVVAQMLQKGFFPTTVEINLLIHALCKEGKPAEAKEFMEQCQ 504

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +GC+ ++V + ++++   +QG  + A+ ++++L      P+ +TY  ++++LG +G   
Sbjct: 505 SKGCTINVVNFTTVIHGFSRQGDLESALSLLDDLYLSNRHPDVVTYTVVVNALGRKGRLK 564

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +++ M      PT+ TY  +I+  C+ G V+  ++  ++M+++  Q     YN V+
Sbjct: 565 EATGLVEKMLNRGLVPTLVTYRTVIHRYCEKGTVEELVDLLDKMLAR--QELKSVYNQVI 622

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LC  G LNEA  LL  +  ++      T + L++    +G   +A  +  +M +  + 
Sbjct: 623 EKLCAFGKLNEAYGLLSKVLRTASQRDAQTCHILMESFLNRGLTIQAYNVACRMFQRNLI 682

Query: 465 PD 466
           PD
Sbjct: 683 PD 684



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 78/296 (26%), Positives = 143/296 (48%), Gaps = 3/296 (1%)

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ VL  M  +GC+PDI   N  VN     G+ D A+   + +   G+EP+ +TYN L+ 
Sbjct: 180 AMRVLQLMQTDGCAPDISICNVAVNVLVVAGRVDKALGFADRMRRVGVEPDVVTYNCLIK 239

Query: 336 SLGS-RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS-KNC 393
            L S R   +A++ ++ +M +    P   +Y  +++ LCK   V    +    M +    
Sbjct: 240 GLCSVRRVVEALE-MIGVMLKNGCPPDKISYYTVMSFLCKEKRVSEVRSLLATMRNDAGL 298

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
             D VTYN ++  L K G  +EAL+ L    G       + Y+ ++      G M +A  
Sbjct: 299 LTDQVTYNMLIHVLAKHGHADEALEFLRESEGKRFRVDEVGYSAVVHSFCLNGRMAEAKE 358

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           + G+M+     PD +T+  ++ GFCR  ++++A  ++K + K G K     +  +++GLC
Sbjct: 359 IVGEMISKECHPDVVTYSAVVDGFCRIGEIDQARKMMKHMYKNGCKPNIVTHTALLNGLC 418

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           K  K   A ++L       + P D  +S ++     +G  +E+  +  ++++   F
Sbjct: 419 KVGKSSEAWELLNKSGEDWWTPSDITYSVVMHGFRREGKLKESCDVVAQMLQKGFF 474


>gi|18087893|gb|AAL59047.1|AC087182_30 putative membrane-associated salt-inducible protein,3'-partial
           [Oryza sativa Japonica Group]
          Length = 571

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/403 (28%), Positives = 193/403 (47%), Gaps = 8/403 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+ GL+   R++ A K  +  +     PD  T+N ++ GLC+ GQ+R A  +  ++   G
Sbjct: 162 LLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKAWG 221

Query: 218 CEPDVITYNTILRTMFDNG---KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
             P V TYN+++      G            K+ +  G  P  +T+ +LI   CK    A
Sbjct: 222 LAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSNTA 281

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A+ V ++M  +G +  +VTYNSL++  C +GK ++ V ++  +   G+ PN IT+  +L
Sbjct: 282 AAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGCVL 341

Query: 335 HSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ 394
                +G     +  +D M E +  P V  YNILI+   + G ++ A+     M  K   
Sbjct: 342 KGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGIS 401

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
           P++ TYN ++    + G    A  LL  +        ++TYN LI  L  KG + KA+ L
Sbjct: 402 PNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKL 461

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
             +M E G+ P+ +T+ T+I GFC    ++ A ++   + K   +     Y + I   C+
Sbjct: 462 LDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYFCQ 521

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
             K+D A  +L  M+     P+   + TI      +GM E+ Y
Sbjct: 522 IGKMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEKGY 559



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 106/376 (28%), Positives = 186/376 (49%), Gaps = 3/376 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L       ++  A K      RR   PD +    +I GL RI ++ KA  V + +  
Sbjct: 160 NALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDVAKDIKA 219

Query: 181 SGGVPDTITYNMMVGGLCKR---GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
            G  P   TYN ++ G CK+   G +     LL EM  +G  P  +T+  ++     N  
Sbjct: 220 WGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLINGYCKNSN 279

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
              A+  +++  ++G    ++TY  LI  +C +  +   ++++++M   G SP+ +T+  
Sbjct: 280 TAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPNEITFGC 339

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++   CK+G   DA   I+ +  R +EP+ + YN L+      G  +    + + M +  
Sbjct: 340 VLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKG 399

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            SP V TYN LI G  + G    A    ++M  K  + D+VTYN ++GALC +G + +A+
Sbjct: 400 ISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAV 459

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           +LL  ++     P  +TYNT+I G   KG ++ A  +  +M +     + +T+   I  F
Sbjct: 460 KLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYNVFIKYF 519

Query: 478 CRADQVEEAVDLLKEI 493
           C+  +++EA DLL E+
Sbjct: 520 CQIGKMDEANDLLNEM 535



 Score =  171 bits (433), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 183/393 (46%), Gaps = 3/393 (0%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P T + N ++ GL    ++  A             PD+ T+NT++  +   G+ ++A   
Sbjct: 154 PSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAGDV 213

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV---LDDMAIEGCSPDIVTYNSLVNF 301
            KD    G  P + TY  LI+  CK+ G      V   L +M   G SP  VT+  L+N 
Sbjct: 214 AKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLING 273

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK      AV V   +  +G+  + +TYN+L+  L S G  +   K+++ M +   SP 
Sbjct: 274 YCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLSPN 333

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             T+  ++ G CK G++  A +  + M  +N +PD+V YN ++    + G + +A+ +  
Sbjct: 334 EITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAMAVKE 393

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +     SP + TYN LI G ++ G    A  L  +M E GI  D +T+  LI   C   
Sbjct: 394 AMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGALCCKG 453

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V +AV LL E+ + G +  +  Y  +I G C    +  A ++   M   R + +   ++
Sbjct: 454 EVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANVVTYN 513

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             +K     G  +EA  L  ++++  +   G T
Sbjct: 514 VFIKYFCQIGKMDEANDLLNEMLDKCLVPNGIT 546



 Score =  139 bits (351), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 83/294 (28%), Positives = 145/294 (49%), Gaps = 5/294 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +C       A ++ + M ++          +LI GL    ++E+  K+++ M   G
Sbjct: 270 LINGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLG 329

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ IT+  ++ G CK+G +  A   +D M+    EPDV+ YN ++      GK + A+
Sbjct: 330 LSPNEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYRRLGKMEDAM 389

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              +   +KG  P + TY  LI    +      A  +LD+M  +G   D+VTYN L+   
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C +G+   AV +++ +   G+EPN +TYNT++     +G   +  +I   M +      V
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRMEKCRKRANV 509

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
            TYN+ I   C+ G +D A +  N+M+ K   P+ +TY T+     KEGM+ + 
Sbjct: 510 VTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETI-----KEGMMEKG 558



 Score =  131 bits (329), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 76/231 (32%), Positives = 122/231 (52%), Gaps = 10/231 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPD---FHFCINLIRGLIRIDRIEKAS 172
           +E T   +L+ FC +G + DA+  ID M  RN  PD   ++  I++ R   R+ ++E A 
Sbjct: 333 NEITFGCVLKGFCKKGMMADANDWIDGMTERNVEPDVVIYNILIDVYR---RLGKMEDAM 389

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V + M   G  P+  TYN ++ G  + G  RSA  LLDEM   G E DV+TYN ++  +
Sbjct: 390 AVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSASGLLDEMKEKGIEADVVTYNVLIGAL 449

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC--SP 290
              G+ ++A+    +    G  P  +TY  +I+  C +  I  A E+   M  E C    
Sbjct: 450 CCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGFCDKGNIKSAYEIRTRM--EKCRKRA 507

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           ++VTYN  + + C+ GK D+A  ++N +L + + PN ITY T+   +  +G
Sbjct: 508 NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVPNGITYETIKEGMMEKG 558



 Score =  115 bits (287), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 65/202 (32%), Positives = 102/202 (50%), Gaps = 3/202 (1%)

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
           H P+  + N L+ GL     VD A  +F   + +   PDI T+NTV+  LC+ G L +A 
Sbjct: 152 HRPSTSSVNALLAGLVGAKRVDLAEKAFRSALRRRVSPDIYTFNTVISGLCRIGQLRKAG 211

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGC---MEKAMVLYGQMMENGISPDDITHRTLI 474
            +   +     +P + TYN+LIDG  KKG    M    +L  +M+E GISP  +T   LI
Sbjct: 212 DVAKDIKAWGLAPSVATYNSLIDGYCKKGGAGNMYHVDMLLKEMVEAGISPTAVTFGVLI 271

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G+C+      AV + +E+ ++G       Y  +I GLC   KV+  ++++E M      
Sbjct: 272 NGYCKNSNTAAAVRVFEEMKQQGIAASVVTYNSLISGLCSEGKVEEGVKLMEEMEDLGLS 331

Query: 535 PDDTVFSTIVKKVADDGMTEEA 556
           P++  F  ++K     GM  +A
Sbjct: 332 PNEITFGCVLKGFCKKGMMADA 353



 Score = 94.4 bits (233), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 63/200 (31%), Positives = 104/200 (52%), Gaps = 4/200 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D    N ++  +   GK+ DA  + + MA++   P+      LI G  R      AS
Sbjct: 365 VEPDVVIYNILIDVYRRLGKMEDAMAVKEAMAKKGISPNVTTYNCLITGFSRSGDWRSAS 424

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  M   G   D +TYN+++G LC +G++R A+ LLDEMS  G EP+ +TYNTI++  
Sbjct: 425 GLLDEMKEKGIEADVVTYNVLIGALCCKGEVRKAVKLLDEMSEVGLEPNHLTYNTIIQGF 484

Query: 233 FDNGKFKQA--IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            D G  K A  I    ++ RK     ++TY + I+  C+   +  A ++L++M  +   P
Sbjct: 485 CDKGNIKSAYEIRTRMEKCRKRA--NVVTYNVFIKYFCQIGKMDEANDLLNEMLDKCLVP 542

Query: 291 DIVTYNSLVNFSCKQGKYDD 310
           + +TY ++     ++G   D
Sbjct: 543 NGITYETIKEGMMEKGYTPD 562


>gi|242058841|ref|XP_002458566.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
 gi|241930541|gb|EES03686.1| hypothetical protein SORBIDRAFT_03g035845 [Sorghum bicolor]
          Length = 796

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 124/486 (25%), Positives = 220/486 (45%), Gaps = 36/486 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G++ +A +L   M      P       LI GL R  +  +   VLQ M
Sbjct: 248 TYNVLMDALCKSGRVEEAFRLKGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEM 307

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ + YN M+G  C++G    A+ L DEM   G +  V+TYN I + +   G+ 
Sbjct: 308 QGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEM 367

Query: 239 KQA---------------------IGFW---------------KDQLRKGCPPYLITYTI 262
           + A                     +  W               ++ L +   P     T 
Sbjct: 368 EHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTA 427

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
            I+++CK      A E+   +  +G   ++ T N+L++  C+     +A  V+  +++ G
Sbjct: 428 CIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSG 487

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
           +E + ITYN ++         D   ++ D M +    P +FT+NI ++  C  G V+  +
Sbjct: 488 VELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEIL 547

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
           +  +QM S+  +PDIVTY T++   CK   +++A + L  L  +   P  + YN LI G 
Sbjct: 548 HLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGY 607

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            + G +  A+ +   M  NGI P  +T+ +L++  C A  VEE   +  +   +  ++  
Sbjct: 608 GRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGV 667

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y ++I G CK  K+D A+   + M S    P+   ++T++   +  G  EEA KL+ +
Sbjct: 668 IGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDE 727

Query: 563 LIEWKV 568
           ++   +
Sbjct: 728 MVSLGI 733



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 197/407 (48%), Gaps = 6/407 (1%)

Query: 120 NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV-LQIM 178
           N+ +  +    G+L    +LI  M  R   P+       I+ L +  + E+A+++  Q++
Sbjct: 390 NSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVL 449

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
               GV +  T N ++ GLC+   ++ A  +L  M  SG E D ITYN +++      K 
Sbjct: 450 GKGLGV-NVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM 508

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +AI    D +++G  P L T+ I +   C    +   + +LD M  EG  PDIVTY ++
Sbjct: 509 DEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTI 568

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK      A   +  L+  G+ PN++ YN L+   G  G       ILD M     
Sbjct: 569 IDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNALIGGYGRNGNISDAIGILDTMKYNGI 628

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            PT  TYN L+  +C  GLV+     F Q + K+ +  ++ Y  ++   CK G ++EA+ 
Sbjct: 629 QPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKDIELGVIGYTIIIQGFCKIGKIDEAVM 688

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               ++     P  +TY TL+   +K G  E+A  L+ +M+  GI PD +++ TLI GFC
Sbjct: 689 YFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEASKLFDEMVSLGIVPDSVSYNTLISGFC 748

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL----CKSKKVDMA 521
             D +++ V+   E+  +  K    +Y   + G+    C+ + V  A
Sbjct: 749 EVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGITTPWCQKEAVSNA 795



 Score =  176 bits (446), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 114/421 (27%), Positives = 207/421 (49%), Gaps = 2/421 (0%)

Query: 126 NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV- 184
           N  + G L+ A+     ++ R   P    C  L+  L    +++ A KV   M     V 
Sbjct: 149 NSPAPGSLSRAADAFLELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDGKTVA 208

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           PD  TY  M+  LC+ G+I +A A+L E+  SG +P V+TYN ++  +  +G+ ++A   
Sbjct: 209 PDVHTYTAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRL 268

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
               +     P ++T+ ILI  + +         VL +M   G +P+ V YN ++ + C+
Sbjct: 269 KGRMVEGRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCR 328

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
           +G   +A+ + + ++S+G++   +TYN +  +L   G  +  +KILD M  A        
Sbjct: 329 KGHCSEALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSL 388

Query: 365 YNILIN-GLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
           +N ++   L   G +D  +    +M+++  +P+       +  LCK G   EA ++   +
Sbjct: 389 FNSVVAWHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQV 448

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
            G      + T N LI GL +   M++A  +   M+ +G+  D IT+  +I G C+A ++
Sbjct: 449 LGKGLGVNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKM 508

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           +EA+ L  ++ KRG K     + + +H  C   KV+  + +L+ M S   KPD   + TI
Sbjct: 509 DEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGKVEEILHLLDQMKSEGLKPDIVTYGTI 568

Query: 544 V 544
           +
Sbjct: 569 I 569



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 118/481 (24%), Positives = 227/481 (47%), Gaps = 12/481 (2%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI-RGLI 163
           L    G  +  +E   N+++   C +G  ++A KL D M  +  I       NLI + L 
Sbjct: 304 LQEMQGFGITPNEVIYNEMIGWHCRKGHCSEALKLFDEMVSKG-IKQTVVTYNLIAKALC 362

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVG-GLCKRGQIRSAIALLDEMSVSGCEPDV 222
           +   +E A K+L  M+++G +     +N +V   L   G++   + L+ EM     +P+ 
Sbjct: 363 KEGEMEHAEKILDEMLLAGMMVHCSLFNSVVAWHLRGTGRLDLVLRLIREMLARFLKPND 422

Query: 223 ITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDD 282
                 ++ +  +GK ++A   W   L KG    + T   LI  +C+   +  A +VL  
Sbjct: 423 ALMTACIQELCKSGKHEEAAEIWFQVLGKGLGVNVATSNALIHGLCQGNNMKEATKVLKA 482

Query: 283 MAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGC 342
           M   G   D +TYN ++   CK  K D+A+ + ++++ RG +P+  T+N  LH+  + G 
Sbjct: 483 MVNSGVELDRITYNIMIQGCCKASKMDEAIQLRDDMIKRGFKPDLFTFNIFLHTYCNLGK 542

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
            + +  +LD M      P + TY  +I+G CK   + +A     +++    +P+ V YN 
Sbjct: 543 VEEILHLLDQMKSEGLKPDIVTYGTIIDGYCKAKDMHKANEYLTELMKNGLRPNAVIYNA 602

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++G   + G +++A+ +L  +  +   P  +TYN+L+  +   G +E+   ++ Q +   
Sbjct: 603 LIGGYGRNGNISDAIGILDTMKYNGIQPTPVTYNSLMYWMCHAGLVEEVKAVFAQCIVKD 662

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
           I    I +  +I GFC+  +++EAV   KE+  RG       Y  ++    KS   + A 
Sbjct: 663 IELGVIGYTIIIQGFCKIGKIDEAVMYFKEMHSRGIPPNKMTYTTLMFAYSKSGNKEEAS 722

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVAD----DGMTEEAYKLWQKLIE-----WKVFEKGT 573
           ++ + M+S    PD   ++T++    +    D M E   ++  ++++     +  F  G 
Sbjct: 723 KLFDEMVSLGIVPDSVSYNTLISGFCEVDSLDKMVESPAEMSSQVLKQDGCSYNAFVDGI 782

Query: 574 T 574
           T
Sbjct: 783 T 783



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 93/366 (25%), Positives = 178/366 (48%), Gaps = 7/366 (1%)

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF---KQAIGFWKDQLRKGCPPYLITY 260
           R+A A L E+S  G  P + T + ++  +   G+    ++  G  +D   K   P + TY
Sbjct: 158 RAADAFL-ELSARGASPSIKTCSILVEALGCGGQLDVARKVFGEMRDG--KTVAPDVHTY 214

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           T +I+ +C+   I  A  +L ++   G  P +VTYN L++  CK G+ ++A  +   ++ 
Sbjct: 215 TAMIKALCRAGEIDAAFAMLAELRRSGIQPTVVTYNVLMDALCKSGRVEEAFRLKGRMVE 274

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
             + P+ +T+  L+  L     +  V  +L  M     +P    YN +I   C+ G    
Sbjct: 275 GRVRPSIVTFGILISGLARGQQFGEVGAVLQEMQGFGITPNEVIYNEMIGWHCRKGHCSE 334

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLI 439
           A+  F++MVSK  +  +VTYN +  ALCKEG +  A ++L  +L       C +  + + 
Sbjct: 335 ALKLFDEMVSKGIKQTVVTYNLIAKALCKEGEMEHAEKILDEMLLAGMMVHCSLFNSVVA 394

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
             L   G ++  + L  +M+   + P+D      I   C++ + EEA ++  ++  +G  
Sbjct: 395 WHLRGTGRLDLVLRLIREMLARFLKPNDALMTACIQELCKSGKHEEAAEIWFQVLGKGLG 454

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           +  +    +IHGLC+   +  A +VL+ M++S  + D   ++ +++        +EA +L
Sbjct: 455 VNVATSNALIHGLCQGNNMKEATKVLKAMVNSGVELDRITYNIMIQGCCKASKMDEAIQL 514

Query: 560 WQKLIE 565
              +I+
Sbjct: 515 RDDMIK 520


>gi|224111362|ref|XP_002315826.1| predicted protein [Populus trichocarpa]
 gi|222864866|gb|EEF01997.1| predicted protein [Populus trichocarpa]
          Length = 636

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 123/473 (26%), Positives = 216/473 (45%), Gaps = 35/473 (7%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G L  A +    M +   +P    C   +  L +    + +    + MV +G  P   TY
Sbjct: 76  GMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTY 135

Query: 191 NMMVGGLCKRGQIRSA-----------------------------------IALLDEMSV 215
           N+M+G +CK G + +A                                   + L +EM  
Sbjct: 136 NIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKF 195

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
            GCEPDVITYN ++ +        +A  F+++   K   P +I+Y+ LI+ +CK+  +  
Sbjct: 196 MGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQM 255

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           AI+   DM   G  P+  TY+SL++ +CK G   +A ++ + +L   ++ N +TY TLL 
Sbjct: 256 AIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLD 315

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
            L   G  +  +++   M +A  +P +  Y  LI+G  K   +D+A+  FN+M  K+ +P
Sbjct: 316 GLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKP 375

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           DI+ + T++  LC E  L E   ++  +  S      + Y TL+D   K G   +A+ L 
Sbjct: 376 DILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLL 435

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M + G     +T   LI G C+   V+EA+     +     +   + Y  +I GLCK+
Sbjct: 436 EEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKN 495

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +  A ++ + M      PD   ++ ++      G  +EA  +  K++E  +
Sbjct: 496 NCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGI 548



 Score =  182 bits (462), Expect = 5e-43,   Method: Compositional matrix adjust.
 Identities = 123/482 (25%), Positives = 216/482 (44%), Gaps = 35/482 (7%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++ + C  G +  A  L + M +    PD      LI G  +I  ++++  + + M
Sbjct: 134 TYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEM 193

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  PD ITYN ++   CK   +  A     EM     +P+VI+Y+T++  +   G  
Sbjct: 194 KFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMM 253

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + AI F+ D  R G  P   TY+ LI+  CK   +  A  + D+M  E    +IVTY +L
Sbjct: 254 QMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTL 313

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C++G  ++A  +   +   G+ PN   Y  L+H        D   ++ + M E   
Sbjct: 314 LDGLCEEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDI 373

Query: 359 SPTVFTYNILINGLC-----------------------------------KYGLVDRAIN 383
            P +  +  ++ GLC                                   K G    AIN
Sbjct: 374 KPDILLWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAIN 433

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
              +M     +  +VT+  ++  LCK G++ EA+     +      P +  Y  LIDGL 
Sbjct: 434 LLEEMRDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLC 493

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K  C+  A  L+ +M +  + PD I +  +I G  +    +EA+++  ++ + G ++   
Sbjct: 494 KNNCIGDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLY 553

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           AY  ++ GL +  +V  A + L  MI     PD+T+ + +++K  + G  +EA +L  +L
Sbjct: 554 AYTSLVWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNEL 613

Query: 564 IE 565
           +E
Sbjct: 614 VE 615



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 119/445 (26%), Positives = 204/445 (45%), Gaps = 2/445 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIM--ARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           N IL+       +   S + +I+   R   +P F     L   L+ +  +E A +    M
Sbjct: 29  NNILKELVLSSWVLPGSDVFEILWTTRNVCVPGFGVFDALFSVLVELGMLEAAGQCFLRM 88

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                +P   + N  +  L K G+   +     +M  +G  P V TYN ++  +   G  
Sbjct: 89  TKFRVLPKARSCNAFLHRLSKAGEGDLSRDFFRDMVGAGIAPTVFTYNIMIGHVCKEGDM 148

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             A   ++   + G  P ++TY  LI+   K   +  ++ + ++M   GC PD++TYN+L
Sbjct: 149 LTARSLFEQMKKMGLTPDIVTYNTLIDGYGKIGLLDESVCLFEEMKFMGCEPDVITYNAL 208

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK      A      +  + ++PN I+Y+TL+ +L   G      K    M     
Sbjct: 209 INSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIKFFVDMTRVGL 268

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  FTY+ LI+  CK G +  A    ++M+ ++   +IVTY T+L  LC+EGM+NEA +
Sbjct: 269 LPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEE 328

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +  +  +P L  Y  LI G  K   M+KAM L+ +M E  I PD +   T++WG C
Sbjct: 329 LFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLC 388

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
              ++EE   ++ E+ + G       Y  ++    K+     AI +LE M     +    
Sbjct: 389 SESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVV 448

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKL 563
            F  ++  +   G+ +EA   + ++
Sbjct: 449 TFCALIDGLCKRGLVQEAIYYFGRM 473



 Score =  132 bits (333), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 100/419 (23%), Positives = 180/419 (42%), Gaps = 35/419 (8%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++ +FC    +  A +    M  ++  P+      LI  L +   ++ A K
Sbjct: 199 EPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVISYSTLIDALCKEGMMQMAIK 258

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
               M   G +P+  TY+ ++   CK G +  A  L DEM     + +++TY T+L  + 
Sbjct: 259 FFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLC 318

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           + G   +A   ++   + G  P L  YT LI    K   + +A+E+ ++M  +   PDI+
Sbjct: 319 EEGMMNEAEELFRAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDIL 378

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS----------------- 336
            + ++V   C + K ++  +++  +   G+  N + Y TL+ +                 
Sbjct: 379 LWGTIVWGLCSESKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEM 438

Query: 337 --LGS----------------RGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             LG+                RG           M +    P V  Y  LI+GLCK   +
Sbjct: 439 RDLGTEVTVVTFCALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCI 498

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A   F++M  KN  PD + Y  ++    K G   EAL + + +        L  Y +L
Sbjct: 499 GDAKKLFDEMQDKNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSL 558

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           + GL++ G +++A     +M+  GI PD+     L+        ++EA++L  E+ ++G
Sbjct: 559 VWGLSQCGQVQQARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKG 617



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 78/348 (22%), Positives = 155/348 (44%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T + ++   C  G L +A  L D M + +   +      L+ GL     + +A ++ 
Sbjct: 271 NEFTYSSLIDANCKAGNLGEAFMLADEMLQEHVDLNIVTYTTLLDGLCEEGMMNEAEELF 330

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +G  P+   Y  ++ G  K   +  A+ L +EM     +PD++ + TI+  +   
Sbjct: 331 RAMGKAGVTPNLQAYTALIHGHIKVRSMDKAMELFNEMREKDIKPDILLWGTIVWGLCSE 390

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K ++      +    G     + YT L++   K      AI +L++M   G    +VT+
Sbjct: 391 SKLEECKIIMTEMKESGIGANPVIYTTLMDAYFKAGNRTEAINLLEEMRDLGTEVTVVTF 450

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +L++  CK+G   +A+     +    ++PN   Y  L+  L    C     K+ D M +
Sbjct: 451 CALIDGLCKRGLVQEAIYYFGRMPDHDLQPNVAVYTALIDGLCKNNCIGDAKKLFDEMQD 510

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  P    Y  +I+G  K+G    A+N  N+M+    + D+  Y +++  L + G + +
Sbjct: 511 KNMIPDKIAYTAMIDGNLKHGNFQEALNMRNKMMEMGIELDLYAYTSLVWGLSQCGQVQQ 570

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           A + L  + G    P       L+    + G +++A+ L  +++E G+
Sbjct: 571 ARKFLAEMIGKGIIPDETLCTRLLRKHYELGNIDEAIELQNELVEKGL 618



 Score =  109 bits (272), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 67/244 (27%), Positives = 115/244 (47%)

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P    ++ L   L   G  +A  +    M +    P   + N  ++ L K G  D + + 
Sbjct: 60  PGFGVFDALFSVLVELGMLEAAGQCFLRMTKFRVLPKARSCNAFLHRLSKAGEGDLSRDF 119

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F  MV     P + TYN ++G +CKEG +  A  L   +     +P ++TYNTLIDG  K
Sbjct: 120 FRDMVGAGIAPTVFTYNIMIGHVCKEGDMLTARSLFEQMKKMGLTPDIVTYNTLIDGYGK 179

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G +++++ L+ +M   G  PD IT+  LI  FC+   +  A +  +E+  +  K    +
Sbjct: 180 IGLLDESVCLFEEMKFMGCEPDVITYNALINSFCKFKGMLRAFEFFREMKDKDLKPNVIS 239

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I  LCK   + MAI+    M      P++  +S+++      G   EA+ L  +++
Sbjct: 240 YSTLIDALCKEGMMQMAIKFFVDMTRVGLLPNEFTYSSLIDANCKAGNLGEAFMLADEML 299

Query: 565 EWKV 568
           +  V
Sbjct: 300 QEHV 303


>gi|37572999|dbj|BAC98691.1| putative fertility restorer homologue [Oryza sativa Japonica Group]
 gi|222640519|gb|EEE68651.1| hypothetical protein OsJ_27230 [Oryza sativa Japonica Group]
          Length = 691

 Score =  189 bits (480), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 221/474 (46%), Gaps = 36/474 (7%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP-DTIT 189
           G+  D  +   I+A     PD       ++  +    + +A  +L+ M   G  P +  +
Sbjct: 143 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 202

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           YN+++ G+ + G+   A+ + DEM+     P+ ITYNT++      G  +         +
Sbjct: 203 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMV 262

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
             G  P  ITY +L+  +C+   +     +LD+MA +   PD  TY+ L +   + G   
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
             + +    L  G+     T + LL+ L   G     +++L  +  A   PT   YN LI
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           NG C+ G ++ A ++F QM S++ +PD +TYN ++  LCK   +  A  LL  +  +  +
Sbjct: 383 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 442

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P + T+NTLID   + G +EK  ++  +M ENG+ P+ +++ +++  FC+  ++ EAV +
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 502

Query: 490 LKEIGKRG----------------------------NKMRNSA-------YRLVIHGLCK 514
           L ++  +                              KM+++        Y L+I GLC 
Sbjct: 503 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCN 562

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             ++  A +++  + + R  PD   ++T++      G  ++A  L Q++ ++ +
Sbjct: 563 QSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 616



 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 196/415 (47%), Gaps = 35/415 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHF----------------------- 154
           T N +L   C  G++ + S L+D MA +  +PD F +                       
Sbjct: 272 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 331

Query: 155 -----------CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
                      C  L+ GL +  ++  A +VLQ +V +G VP  + YN ++ G C+ G++
Sbjct: 332 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 391

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A +   +M     +PD ITYN ++  +    +   A     +    G  P + T+  L
Sbjct: 392 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 451

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+   +   + +   VL +M   G  P++V+Y S+VN  CK GK  +AV +++++  + +
Sbjct: 452 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 511

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN+  YN ++ +    G  D    +++ M     SP++ TYN+LI GLC    +  A  
Sbjct: 512 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 571

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
             N + +    PD V+YNT++ A C  G +++AL L   ++       + TY+ LI GL 
Sbjct: 572 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 631

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
             G + +   LY +MM+N + P +  H  ++  + +     +A DL KE+ ++ N
Sbjct: 632 GAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRN 686



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 225/483 (46%), Gaps = 37/483 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMV 179
           N ++      G+  DA ++ D M  R  +P+ H   N +I G I+   +E   ++   MV
Sbjct: 204 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPN-HITYNTMIDGHIKGGDLEAGFRLRDQMV 262

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  P+ ITYN+++ GLC+ G++    ALLDEM+     PD  TY+ +   +  NG  K
Sbjct: 263 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 322

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA--------------- 284
             +  +   L+ G      T +IL+  +CK   ++ A EVL  +                
Sbjct: 323 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 382

Query: 285 --------IEGC------------SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
                   +EG              PD +TYN+L+N  CK  +  +A  ++  +   G+ 
Sbjct: 383 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 442

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P   T+NTL+ + G  G  +    +L  M E    P V +Y  ++N  CK G +  A+  
Sbjct: 443 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 502

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            + M  K+  P+   YN ++ A  + G  ++A  L+  +  +  SP ++TYN LI GL  
Sbjct: 503 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCN 562

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           +  + +A  +   +  + + PD +++ TLI   C    +++A+DL + + K G K     
Sbjct: 563 QSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRT 622

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I GL  + +++    + + M+ +   P + + + +V+  +  G   +A  L ++++
Sbjct: 623 YHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 682

Query: 565 EWK 567
           + +
Sbjct: 683 QKR 685



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 204/484 (42%), Gaps = 36/484 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINL-IRGLIRIDRIEKASKVLQIMV 179
           NK +Q   + G L +A  ++  M R    P   F  N+ I G+ R  R   A +V   M 
Sbjct: 168 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 227

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
               +P+ ITYN M+ G  K G + +   L D+M   G +P+ ITYN +L  +   G+  
Sbjct: 228 ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 287

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +      +   +   P   TY+IL + + +       + +       G +    T + L+
Sbjct: 288 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILL 347

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  CK GK   A  V+ +L++ G+ P  + YNTL++     G  +        M      
Sbjct: 348 NGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 407

Query: 360 PTVFTYNILINGLCKYGLVDRA---------------INSFN------------------ 386
           P   TYN LINGLCK   +  A               + +FN                  
Sbjct: 408 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 467

Query: 387 --QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M     +P++V+Y +++ A CK G + EA+ +L  +      P    YN +ID   +
Sbjct: 468 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 527

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G  ++A +L  +M  NGISP  +T+  LI G C   Q+ EA +++  +          +
Sbjct: 528 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 587

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I   C    +D A+ + + M     K     +  ++  +   G   E   L+QK++
Sbjct: 588 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 647

Query: 565 EWKV 568
           +  V
Sbjct: 648 QNNV 651



 Score =  168 bits (425), Expect = 9e-39,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 174/372 (46%), Gaps = 4/372 (1%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC-PPYL 257
           +   +R A  +L   + +G  PD   +N  ++     G   +A+G  +   R G  PP  
Sbjct: 144 RHADVRRAFGIL---ASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNA 200

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            +Y ++I  + +      A+EV D+M      P+ +TYN++++   K G  +    + + 
Sbjct: 201 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 260

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           ++  G++PN+ITYN LL  L   G       +LD M      P  FTY+IL +GL + G 
Sbjct: 261 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 320

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
               ++ F + +         T + +L  LCK+G ++ A ++L  L  +   P  + YNT
Sbjct: 321 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 380

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+G  + G +E A   +GQM    I PD IT+  LI G C+A+++  A DLL E+   G
Sbjct: 381 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 440

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  +  +I    ++ +++    VL  M  +  KP+   + +IV     +G   EA 
Sbjct: 441 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 500

Query: 558 KLWQKLIEWKVF 569
            +   +    V 
Sbjct: 501 AILDDMFHKDVL 512



 Score =  123 bits (309), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 137/284 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++   C   ++T+A  L+  M      P       LI    R  ++EK  
Sbjct: 406 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 465

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL  M  +G  P+ ++Y  +V   CK G+I  A+A+LD+M      P+   YN I+   
Sbjct: 466 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 525

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            ++G   QA    +     G  P ++TY +LI+ +C Q  I+ A E+++ ++     PD 
Sbjct: 526 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 585

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V+YN+L++  C +G  D A+ +   +   G++    TY+ L+  LG  G  + ++ +   
Sbjct: 586 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 645

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           M + +  P+   +NI++    KYG   +A +   +M+ K    D
Sbjct: 646 MMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 689



 Score = 72.8 bits (177), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 2/220 (0%)

Query: 351 DIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           D+ +EA    P++ + N+L+  L   G       +F  + S   +PD   +N  + A   
Sbjct: 117 DLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVA 176

Query: 410 EGMLNEALQLLHLLNGSSCSPC-LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
            G L EA+ +L  +      P    +YN +I G+ + G    A+ ++ +M E  + P+ I
Sbjct: 177 AGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHI 236

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ T+I G  +   +E    L  ++   G K     Y +++ GLC++ ++     +L+ M
Sbjct: 237 TYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM 296

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            S +  PD   +S +   ++ +G ++    L+ K ++  V
Sbjct: 297 ASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGV 336


>gi|357518651|ref|XP_003629614.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355523636|gb|AET04090.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 592

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/428 (26%), Positives = 215/428 (50%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C +G +  A +L+D + +     D      LI GL ++ +  +A   L+ M    
Sbjct: 152 LINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERN 211

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+ + Y+ ++ GLCK G +  A+ L  EMS  G +P+++TY  +++ + + G++K+A 
Sbjct: 212 WNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAG 271

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               + ++ G  P L +  IL++ +CK+  I +A  V+  M + G  PD+ TYNSL++  
Sbjct: 272 SLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRY 331

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C Q + D+A  V   ++SRG  P+ + Y +L+H        +    +LD M +   +P V
Sbjct: 332 CLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDV 391

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            T+  LI G C+ G    A   F  M      P++ T   +L  LCK  +L+EAL L H 
Sbjct: 392 VTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHA 451

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           +  S+    ++ Y+ ++DG+   G +  A+ L+  +   G+  +   +  +I GF +   
Sbjct: 452 MEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGL 511

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +++A DLL  + + G    +  Y + + GL   +++  +I+ L +M    +  D T    
Sbjct: 512 LDKAEDLLSNMEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEM 571

Query: 543 IVKKVADD 550
           I+  ++ +
Sbjct: 572 IINYLSTN 579



 Score =  181 bits (459), Expect = 9e-43,   Method: Compositional matrix adjust.
 Identities = 113/398 (28%), Positives = 193/398 (48%)

Query: 115 NDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           +D KT   ++   C  GK ++A   +  M  RN  P+      ++ GL +   + +A  +
Sbjct: 179 SDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSEALGL 238

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              M   G  P+ +TY  ++ GLC  G+ + A +LLDEM   G  PD+ + N ++  +  
Sbjct: 239 CLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVDVLCK 298

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK  QA       +  G  P + TY  LI++ C Q  +  A  V + M   GC PDIV 
Sbjct: 299 EGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLPDIVA 358

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y SL++  CK    + A+ +++ ++  G  P+ +T+ TL+      G   A  ++   M+
Sbjct: 359 YTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELFLNMH 418

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P + T  I+++GLCK  L+  A++ F+ M   N   +IV Y+ +L  +C  G LN
Sbjct: 419 KYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSAGKLN 478

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            AL+L   L        +  Y  +I+G AK+G ++KA  L   M ENG  PD  T+   +
Sbjct: 479 TALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTYNVFV 538

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            G     ++  ++  L  +  +G  +  +   ++I+ L
Sbjct: 539 QGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYL 576



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 109/433 (25%), Positives = 213/433 (49%), Gaps = 1/433 (0%)

Query: 134 TDASKLIDIMARRNQIPDFHFCINL-IRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           T A  L+  M     I    F +N+ I  L  +  +     VL  M+  G  P  +T+ +
Sbjct: 92  TTAISLVKEMHSSLGIKPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTI 151

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++ GLC +G +  A+ L+D +  +G   DV TY  ++  +   GK  +A+G+ +    + 
Sbjct: 152 LINGLCVKGDVGRAVELVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERN 211

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P ++ Y+ +++ +CK   ++ A+ +  +M+ +G  P++VTY  L+   C  G++ +A 
Sbjct: 212 WNPNVVVYSTVMDGLCKDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAG 271

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            +++ ++  G+ P+  + N L+  L   G       ++  M      P VFTYN LI+  
Sbjct: 272 SLLDEMMKMGVMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRY 331

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           C    +D A   F  MVS+ C PDIV Y +++   CK   +N+A+ LL  +     +P +
Sbjct: 332 CLQNQMDEATRVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDV 391

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           +T+ TLI G  + G    A  L+  M + G  P+  T   ++ G C++  + EA+ L   
Sbjct: 392 VTWTTLIGGFCQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHA 451

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           + K    +    Y +++ G+C + K++ A+++   + +   + +   ++ ++   A  G+
Sbjct: 452 MEKSNLDLNIVIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGL 511

Query: 553 TEEAYKLWQKLIE 565
            ++A  L   + E
Sbjct: 512 LDKAEDLLSNMEE 524



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 130/550 (23%), Positives = 257/550 (46%), Gaps = 11/550 (2%)

Query: 4   TVVPPNSIIELHCLPNLQWCSRQVSLQHGV-VNNHRTQFYSQLRDLGAGRNVSLKCRGLP 62
           T   P     LH +P    C++  ++ H +  ++++TQF + +R+      +      L 
Sbjct: 3   TTTSPFPSPALH-IPLHSHCTKSTNINHEIQSHSNKTQFLNFMRNQCKSGKLKSIDEALN 61

Query: 63  GNVCIDRVNEVDQ--DEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTN 120
               + ++N +    D       ++ +      +++ K+ H     SS G  ++ D    
Sbjct: 62  FFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMH-----SSLG--IKPDTFIL 114

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++ + C    +     ++  M +    P       LI GL     + +A +++  +  
Sbjct: 115 NVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVDHVEK 174

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G   D  TY +++ GLCK G+   A+  L +M      P+V+ Y+T++  +  +G   +
Sbjct: 175 TGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDGLVSE 234

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+G   +   KG  P L+TYT LI+ +C       A  +LD+M   G  PD+ + N LV+
Sbjct: 235 ALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQSLNILVD 294

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK+GK   A  VI  ++  G  P+  TYN+L+     +   D   ++ ++M      P
Sbjct: 295 VLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELMVSRGCLP 354

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +  Y  LI+G CK   +++A++  ++M+     PD+VT+ T++G  C+ G    A +L 
Sbjct: 355 DIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGFCQVGRPLAAKELF 414

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++     P L T   ++DGL K   + +A+ L+  M ++ +  + + +  ++ G C A
Sbjct: 415 LNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNIVIYSIILDGMCSA 474

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++  A++L   +  +G ++   AY ++I+G  K   +D A  +L  M  +   PD   +
Sbjct: 475 GKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSNMEENGCMPDSCTY 534

Query: 541 STIVKKVADD 550
           +  V+ +  +
Sbjct: 535 NVFVQGLVAE 544



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 80/308 (25%), Positives = 145/308 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D ++ N ++   C  GK+  A  +I  M    ++PD     +LI      +++++A+
Sbjct: 282 VMPDLQSLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEAT 341

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V ++MV  G +PD + Y  ++ G CK   I  A+ LLDEM   G  PDV+T+ T++   
Sbjct: 342 RVFELMVSRGCLPDIVAYTSLIHGWCKIKNINKAMHLLDEMIKVGFTPDVVTWTTLIGGF 401

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+   A   + +  + G  P L T  I+++ +CK   ++ A+ +   M       +I
Sbjct: 402 CQVGRPLAAKELFLNMHKYGQVPNLQTCAIILDGLCKSQLLSEALSLFHAMEKSNLDLNI 461

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V Y+ +++  C  GK + A+ + + L ++G++ N   Y  +++    +G  D  + +L  
Sbjct: 462 VIYSIILDGMCSAGKLNTALELFSCLPAKGLQINVYAYTIMINGFAKQGLLDKAEDLLSN 521

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E    P   TYN+ + GL     + R+I     M  K    D  T   ++  L     
Sbjct: 522 MEENGCMPDSCTYNVFVQGLVAEREIARSIKYLTMMRDKGFSVDATTTEMIINYLSTNQG 581

Query: 413 LNEALQLL 420
            NE  + L
Sbjct: 582 DNELREFL 589



 Score = 90.5 bits (223), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/301 (23%), Positives = 134/301 (44%), Gaps = 39/301 (12%)

Query: 303 CKQGKY---DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD-AVDKILDIMNEASH 358
           CK GK    D+A+   + +      P+ I +  LL  +     +  A+  + ++ +    
Sbjct: 48  CKSGKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGI 107

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P  F  N++IN LC   LV    +    M+    +P +VT+  ++  LC +G +  A++
Sbjct: 108 KPDTFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVE 167

Query: 419 LLH----------------LLNG-------------------SSCSPCLITYNTLIDGLA 443
           L+                 L+NG                    + +P ++ Y+T++DGL 
Sbjct: 168 LVDHVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLC 227

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K G + +A+ L  +M   GI P+ +T+  LI G C   + +EA  LL E+ K G      
Sbjct: 228 KDGLVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGVMPDLQ 287

Query: 504 AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           +  +++  LCK  K+  A  V+  MI     PD   +++++ +       +EA ++++ +
Sbjct: 288 SLNILVDVLCKEGKIMQAKSVIGFMILVGEVPDVFTYNSLIDRYCLQNQMDEATRVFELM 347

Query: 564 I 564
           +
Sbjct: 348 V 348



 Score = 76.3 bits (186), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 57/232 (24%), Positives = 109/232 (46%), Gaps = 4/232 (1%)

Query: 341 GCWDAVDKILDI---MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPD 396
           G   ++D+ L+    M + +  P+V  + +L+  + K      AI+   +M S    +PD
Sbjct: 51  GKLKSIDEALNFFHTMAKMNPLPSVIDFTLLLGFIVKMKHYTTAISLVKEMHSSLGIKPD 110

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
               N V+ +LC   ++     +L  +      P ++T+  LI+GL  KG + +A+ L  
Sbjct: 111 TFILNVVINSLCHLKLVAFGFSVLGTMLKLGLEPSVVTFTILINGLCVKGDVGRAVELVD 170

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            + + G   D  T+  LI G C+  +  EAV  L+++ +R        Y  V+ GLCK  
Sbjct: 171 HVEKTGYRSDVKTYGVLINGLCKMGKTSEAVGWLRKMEERNWNPNVVVYSTVMDGLCKDG 230

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            V  A+ +   M     KP+   ++ +++ + + G  +EA  L  ++++  V
Sbjct: 231 LVSEALGLCLEMSGKGIKPNLVTYTCLIQGLCNFGRWKEAGSLLDEMMKMGV 282


>gi|255547043|ref|XP_002514579.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223546183|gb|EEF47685.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 840

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 115/448 (25%), Positives = 217/448 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+  +C  G +  A     +M +   +PD +    LI GL     + +A  +   M  
Sbjct: 285 NTIMSRYCKLGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMEN 344

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD +TYN++  G    G I  A  ++ +M + G  P+++TY  ++      G  ++
Sbjct: 345 HGLEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEE 404

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  +K+ +  G    +I+ T+L+  +CK   +  A ++  +M   G  PD++TY++L++
Sbjct: 405 ALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIH 464

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CKQG+   A+L+   + S  + PNS+ +  +L  L  +G         D +  ++ S 
Sbjct: 465 GLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSL 524

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +  YNI+I+G  K G    A+  + Q+  K   P IVT+N+++   C    L++A +LL
Sbjct: 525 DIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLL 584

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P  +TY TL++   ++G M+  + L  +M    I P  IT+  +I G C+ 
Sbjct: 585 DTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQ 644

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +++E+  LL+++   G      +Y  +I   CK++ +  A Q+ + M+    +P    +
Sbjct: 645 WKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTY 704

Query: 541 STIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + ++      G  ++A  L   L   KV
Sbjct: 705 NILINGFCVYGDLKDADNLLVSLQNRKV 732



 Score =  186 bits (471), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 117/444 (26%), Positives = 212/444 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T N + + F   G +  A  +I  M  +   P+      LI G  +I  +E+A 
Sbjct: 347 LEPDMVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEAL 406

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K+ + M+  G     I+  +++G LCK  Q+  A  L  EM  +G  PD+ITY+T++  +
Sbjct: 407 KLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGL 466

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G+ +QAI  ++        P  + +  ++  +C++  I++A    D +     S DI
Sbjct: 467 CKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDI 526

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + YN +++   K+G   +AV +   L  +G+ P  +T+N+L++            ++LD 
Sbjct: 527 ILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDT 586

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +      P   TY  L+N  C+ G +   +   ++M +K   P  +TY  V+  LCK+  
Sbjct: 587 IKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWK 646

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L E+ QLL  ++    +P  ++YNT+I    K   M KA  LY +M+ + + P  +T+  
Sbjct: 647 LQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNI 706

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           LI GFC    +++A +LL  +  R   +   AY  +I   C    VD A+     M+   
Sbjct: 707 LINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKG 766

Query: 533 YKPDDTVFSTIVKKVADDGMTEEA 556
           ++     +S ++ ++    +  EA
Sbjct: 767 FEVSIRDYSAVIGRLCKRCLVTEA 790



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 117/438 (26%), Positives = 210/438 (47%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  G + +A KL   M              L+  L +  +++ A K+   M  +G  PD 
Sbjct: 397 CQIGNVEEALKLYKEMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDL 456

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           ITY+ ++ GLCK+G+++ AI L ++M  +   P+ + +  IL  + + GK  QA  ++  
Sbjct: 457 ITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDY 516

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            +       +I Y I+I+   K+     A+++   +  +G SP IVT+NSL+   C   K
Sbjct: 517 LITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRK 576

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
              A  +++ +   G+EPN++TY TL++     G   ++ ++L  M   +  PT  TY +
Sbjct: 577 LSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTV 636

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +I GLCK   +  +      M +    PD V+YNT++ A CK   + +A QL   +   +
Sbjct: 637 VIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN 696

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P  +TYN LI+G    G ++ A  L   +    ++ +   + T+I   C    V++AV
Sbjct: 697 LEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDKAV 756

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
              +++ ++G ++    Y  VI  LCK   V  A     +M+S    PD  +F  ++   
Sbjct: 757 VYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLNAF 816

Query: 548 ADDGMTEEAYKLWQKLIE 565
              G     ++L  ++I+
Sbjct: 817 HQCGHLNSEFELLAEMIK 834



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 121/455 (26%), Positives = 207/455 (45%), Gaps = 70/455 (15%)

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           +SG      T +++V GLC++ + + A+    +      +P V+++NTI+      G   
Sbjct: 239 VSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCKLGFVD 298

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN--- 296
            A  F+   L+ G  P   +Y ILI  +C    +  A+++ +DM   G  PD+VTYN   
Sbjct: 299 VAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMGEALDLKNDMENHGLEPDMVTYNILA 358

Query: 297 --------------------------SLVNFS------CKQGKYDDAVLVINNLLSRGME 324
                                     +LV ++      C+ G  ++A+ +   ++S G +
Sbjct: 359 KGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYKEMISHGFQ 418

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            + I+   LL SL      D   K+   M      P + TY+ LI+GLCK G V +AI  
Sbjct: 419 LSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQGEVQQAILL 478

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           + +M S    P+ + +  +L  LC++G +++A      L  S+ S  +I YN +IDG  K
Sbjct: 479 YEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIK 538

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG------- 497
           +G   +A+ LY Q+ E GISP  +T  +L++GFC   ++ +A  LL  I   G       
Sbjct: 539 RGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVT 598

Query: 498 ---------------------NKMRNSA-------YRLVIHGLCKSKKVDMAIQVLELMI 529
                                ++M+  A       Y +VI GLCK  K+  + Q+LE M 
Sbjct: 599 YTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMD 658

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +    PD   ++TI++         +A++L+ K++
Sbjct: 659 AVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKML 693



 Score =  156 bits (394), Expect = 4e-35,   Method: Compositional matrix adjust.
 Identities = 91/343 (26%), Positives = 162/343 (47%)

Query: 120 NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           +  IL   C +GK++ A    D +   N   D      +I G I+     +A K+ + + 
Sbjct: 494 HGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLG 553

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  P  +T+N ++ G C   ++  A  LLD + + G EP+ +TY T++    + G  +
Sbjct: 554 EKGISPTIVTFNSLMYGFCINRKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQ 613

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
             +    +   K   P  ITYT++I+ +CKQ  +  + ++L+DM   G +PD V+YN+++
Sbjct: 614 SLLELLSEMKAKAIGPTHITYTVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTII 673

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
              CK      A  + + +L   +EP S+TYN L++     G     D +L  +     +
Sbjct: 674 QAFCKARDMRKAFQLYDKMLLHNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVN 733

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
              + Y  +I   C  G VD+A+  F QMV K  +  I  Y+ V+G LCK  ++ EA   
Sbjct: 734 LNKYAYTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYF 793

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
             ++      P    +  L++   + G +     L  +M+++G
Sbjct: 794 FCMMLSDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 95/382 (24%), Positives = 177/382 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++   C +G++  A  L + M     IP+      ++ GL    +I +A    
Sbjct: 455 DLITYSTLIHGLCKQGEVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYF 514

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             ++ S    D I YN+M+ G  KRG  R A+ L  ++   G  P ++T+N+++     N
Sbjct: 515 DYLITSNLSLDIILYNIMIDGYIKRGNTREAVKLYKQLGEKGISPTIVTFNSLMYGFCIN 574

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  QA          G  P  +TYT L+   C++  +   +E+L +M  +   P  +TY
Sbjct: 575 RKLSQARRLLDTIKLHGLEPNAVTYTTLMNVYCEEGNMQSLLELLSEMKAKAIGPTHITY 634

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             ++   CKQ K  ++  ++ ++ + G+ P+ ++YNT++ +           ++ D M  
Sbjct: 635 TVVIKGLCKQWKLQESCQLLEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLL 694

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            +  PT  TYNILING C YG +  A N    + ++    +   Y T++ A C +G +++
Sbjct: 695 HNLEPTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYAYTTIIKAHCAKGDVDK 754

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A+     +        +  Y+ +I  L K+  + +A   +  M+ +G+ PD      L+ 
Sbjct: 755 AVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMMLSDGVCPDQDLFEVLLN 814

Query: 476 GFCRADQVEEAVDLLKEIGKRG 497
            F +   +    +LL E+ K G
Sbjct: 815 AFHQCGHLNSEFELLAEMIKSG 836



 Score =  142 bits (358), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 100/384 (26%), Positives = 190/384 (49%), Gaps = 15/384 (3%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK- 246
           + ++M+     +   +  A+ +L +M        + TYN++L  +      + +   W  
Sbjct: 180 VVWDMLACAYSRSAMVHDALFVLVKMKDLNFIVSIQTYNSLLYNL------RHSNIMWDV 233

Query: 247 -DQLR-KGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            ++++  G P    T +I+++ +C+Q     A+    D   +   P +V++N++++  CK
Sbjct: 234 YNEIKVSGTPQSEYTSSIVVDGLCRQSRFQDAVLFFQDTEGKEFQPSVVSFNTIMSRYCK 293

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL---GSRGCWDAVDKILDIMNEASHSPT 361
            G  D A      +L  G+ P++ +YN L+H L   GS G  +A+D   D+ N     P 
Sbjct: 294 LGFVDVAKSFFCMMLKHGLLPDAYSYNILIHGLCIAGSMG--EALDLKNDMENHGL-EPD 350

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           + TYNIL  G    GL++ A N   +M+ K   P++VTY  ++   C+ G + EAL+L  
Sbjct: 351 MVTYNILAKGFRLLGLINGAWNIIQKMLIKGPNPNLVTYTVLICGHCQIGNVEEALKLYK 410

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +        +I+   L+  L K   ++ A  L+ +M  NG+ PD IT+ TLI G C+  
Sbjct: 411 EMISHGFQLSIISSTVLLGSLCKSRQVDVAFKLFCEMEANGLRPDLITYSTLIHGLCKQG 470

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +V++A+ L +++        +  +  ++ GLC+  K+  A    + +I+S    D  +++
Sbjct: 471 EVQQAILLYEKMCSNRIIPNSLIHGAILMGLCEKGKISQARMYFDYLITSNLSLDIILYN 530

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++      G T EA KL+++L E
Sbjct: 531 IMIDGYIKRGNTREAVKLYKQLGE 554



 Score = 55.8 bits (133), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 45/218 (20%), Positives = 85/218 (38%), Gaps = 35/218 (16%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L   D   +  D+ + N I+Q FC    +  A +L D M   N                 
Sbjct: 654 LEDMDAVGLTPDQVSYNTIIQAFCKARDMRKAFQLYDKMLLHN----------------- 696

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
              +E               P ++TYN+++ G C  G ++ A  LL  +       +   
Sbjct: 697 ---LE---------------PTSVTYNILINGFCVYGDLKDADNLLVSLQNRKVNLNKYA 738

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y TI++     G   +A+ +++  + KG    +  Y+ +I ++CK+C +  A      M 
Sbjct: 739 YTTIIKAHCAKGDVDKAVVYFRQMVEKGFEVSIRDYSAVIGRLCKRCLVTEAKYFFCMML 798

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
            +G  PD   +  L+N   + G  +    ++  ++  G
Sbjct: 799 SDGVCPDQDLFEVLLNAFHQCGHLNSEFELLAEMIKSG 836


>gi|357463605|ref|XP_003602084.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355491132|gb|AES72335.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 579

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 121/440 (27%), Positives = 223/440 (50%), Gaps = 32/440 (7%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +++  L++I+    A  + + +  +G  P  +T  +++   C  G I    ++L ++   
Sbjct: 15  HILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSILTKILKM 74

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAI---------GFWKDQ------------------- 248
           G EP+ IT+ T+++ M  NG+  +A+         GF  DQ                   
Sbjct: 75  GYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCKMGETRAA 134

Query: 249 ---LRKG-CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
              LRK      ++ Y+ +I+ +CK   +  A  +  +M  +G  P++ T++ LV+  CK
Sbjct: 135 MQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCK 194

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
             K   A+ ++  ++ +G++PN +TY  ++         +    I ++M +    P V+ 
Sbjct: 195 DRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWC 254

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YNI+INGLCK   VD A+N F +M  K   PD+VTYN ++  LCK G ++ +L+L+  + 
Sbjct: 255 YNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMR 314

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
               +  +ITYN+L+  L K   +++A+ L  ++ + GI P+  T+ TLI G C+  ++E
Sbjct: 315 SIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLE 374

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           +A  + +EI   G  +    Y ++I+GLCK    D A+ +L  M  +   PD   + TI+
Sbjct: 375 DAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETII 434

Query: 545 KKVADDGMTEEAYKLWQKLI 564
             +++ G T +  KL   +I
Sbjct: 435 YALSEKGETVKTNKLLCAMI 454



 Score =  178 bits (452), Expect = 6e-42,   Method: Compositional matrix adjust.
 Identities = 112/391 (28%), Positives = 203/391 (51%), Gaps = 4/391 (1%)

Query: 123 ILQN-FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           IL N +C  G +T    ++  + +    P+      LI+G+    +  +A      +V  
Sbjct: 50  ILMNCYCHTGGITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAH 109

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G   D ++Y +++ GLCK G+ R+A+ +L +  V+    DV+ Y+TI+ ++        A
Sbjct: 110 GFKLDQVSYAILMNGLCKMGETRAAMQMLRKTWVNA---DVVMYSTIIDSLCKGKFVTDA 166

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              + + + KG  P + T++IL++ +CK     +A+ +L  M  +G  P++VTY ++++ 
Sbjct: 167 YRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDG 226

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C   + + A+ + N ++  G+EPN   YN +++ L  +   D    +   M+    +P 
Sbjct: 227 YCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPD 286

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TYNILI+GLCK G +  ++   ++M S     DI+TYN++L ALCK   L++A+ L+ 
Sbjct: 287 VVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVK 346

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +      P + TY TLIDGL K G +E A V++ +++  G      T+  +I G C+  
Sbjct: 347 EIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKG 406

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
             +EA+ LL  +          +Y  +I+ L
Sbjct: 407 LFDEALALLSRMEDNACIPDAVSYETIIYAL 437



 Score =  167 bits (424), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 97/301 (32%), Positives = 165/301 (54%), Gaps = 2/301 (0%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           +V  D    + I+ + C    +TDA +L   M  +   P+ +    L+  L +  + ++A
Sbjct: 142 WVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSILVDALCKDRKGKQA 201

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             +L +M+  G  P+ +TY  ++ G C   Q+  A+ + + M   G EP+V  YN I+  
Sbjct: 202 MNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEGVEPNVWCYNIIING 261

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +    +  +A+  +K+   K   P ++TY ILI+ +CK   I+ ++E++D+M   G + D
Sbjct: 262 LCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVD 321

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKIL 350
           I+TYNSL++  CK    D A+ ++  +  +G++PN  TY TL+  L   G   DA     
Sbjct: 322 IITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQ 381

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           +I+ E  H  TV+TYN++INGLCK GL D A+   ++M    C PD V+Y T++ AL ++
Sbjct: 382 EILTEGYHI-TVWTYNVMINGLCKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEK 440

Query: 411 G 411
           G
Sbjct: 441 G 441



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 98/350 (28%), Positives = 181/350 (51%), Gaps = 5/350 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKV 174
           D+ +   ++   C  G+   A +    M R+  +  D      +I  L +   +  A ++
Sbjct: 114 DQVSYAILMNGLCKMGETRAAMQ----MLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRL 169

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              M+  G  P+  T++++V  LCK  + + A+ LL  M   G +P+V+TY  I+     
Sbjct: 170 YSEMIAKGIFPNVYTFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCL 229

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             +  +A+  +   +++G  P +  Y I+I  +CK+  +  A+ +  +M  +  +PD+VT
Sbjct: 230 VNQVNKALNIFNVMVQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVT 289

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN L++  CK GK   ++ +++ + S G   + ITYN+LLH+L      D    ++  + 
Sbjct: 290 YNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIK 349

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P V TY  LI+GLCK G ++ A   F +++++     + TYN ++  LCK+G+ +
Sbjct: 350 DQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGLCKKGLFD 409

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
           EAL LL  +  ++C P  ++Y T+I  L++KG   K   L   M+  G+S
Sbjct: 410 EALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLS 459



 Score =  155 bits (391), Expect = 8e-35,   Method: Compositional matrix adjust.
 Identities = 92/377 (24%), Positives = 187/377 (49%), Gaps = 32/377 (8%)

Query: 220 PDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV 279
           P ++ +N IL ++     +  AI  ++     G  P ++T TIL+   C   GI     +
Sbjct: 8   PPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFSI 67

Query: 280 LDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
           L  +   G  P+ +T+ +L+   C  G+  +A+L  +++++ G + + ++Y  L++ L  
Sbjct: 68  LTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLCK 127

Query: 340 RG-----------CWDAVD-----KILDIMNEASHS----------------PTVFTYNI 367
            G            W   D      I+D + +                    P V+T++I
Sbjct: 128 MGETRAAMQMLRKTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVYTFSI 187

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           L++ LCK     +A+N    M+ K  +P++VTY  ++   C    +N+AL + +++    
Sbjct: 188 LVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVMVQEG 247

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
             P +  YN +I+GL KK  +++AM L+ +M    I+PD +T+  LI G C+  ++  ++
Sbjct: 248 VEPNVWCYNIIINGLCKKKRVDEAMNLFKEMHWKKINPDVVTYNILIDGLCKLGKISTSL 307

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +L+ E+   G  +    Y  ++H LCK+  +D AI +++ +     +P+   ++T++  +
Sbjct: 308 ELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAITLVKEIKDQGIQPNVCTYTTLIDGL 367

Query: 548 ADDGMTEEAYKLWQKLI 564
             DG  E+AY ++Q+++
Sbjct: 368 CKDGRLEDAYVIFQEIL 384



 Score =  105 bits (261), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 68/279 (24%), Positives = 135/279 (48%), Gaps = 4/279 (1%)

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P I+ +N ++    K   Y  A+ +   L   G++P+ +T   L++     G    +  
Sbjct: 7   TPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGGITFLFS 66

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           IL  + +  + P   T+  LI G+C  G    A+   + +V+   + D V+Y  ++  LC
Sbjct: 67  ILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAILMNGLC 126

Query: 409 KEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           K G    A+Q+L     +  +  ++ Y+T+ID L K   +  A  LY +M+  GI P+  
Sbjct: 127 KMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKGIFPNVY 183

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T   L+   C+  + ++A++LL  + K+G K     Y  ++ G C   +V+ A+ +  +M
Sbjct: 184 TFSILVDALCKDRKGKQAMNLLAMMMKKGVKPNVVTYGAIMDGYCLVNQVNKALNIFNVM 243

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +    +P+   ++ I+  +      +EA  L++++  WK
Sbjct: 244 VQEGVEPNVWCYNIIINGLCKKKRVDEAMNLFKEM-HWK 281



 Score = 76.3 bits (186), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 50/213 (23%), Positives = 97/213 (45%), Gaps = 3/213 (1%)

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M + S +P +  +N ++  L K      AI+ F Q+     +P IVT   ++   C  G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +     +L  +      P  IT+ TLI G+   G   +A++ +  ++ +G   D +++  
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           L+ G C+  +   A+ +L++     + +    Y  +I  LCK K V  A ++   MI+  
Sbjct: 121 LMNGLCKMGETRAAMQMLRKTWVNADVV---MYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             P+   FS +V  +  D   ++A  L   +++
Sbjct: 178 IFPNVYTFSILVDALCKDRKGKQAMNLLAMMMK 210



 Score = 73.9 bits (180), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 46/188 (24%), Positives = 87/188 (46%), Gaps = 3/188 (1%)

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M+  +  P I+ +N +L +L K      A+ L   L  +   P ++T   L++     G 
Sbjct: 1   MLQISPTPPILQFNHILASLVKINHYPTAISLFRQLEFNGIKPSIVTLTILMNCYCHTGG 60

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
           +     +  ++++ G  P+ IT  TLI G C   Q  EA+     +   G K+   +Y +
Sbjct: 61  ITFLFSILTKILKMGYEPNSITFTTLIKGMCLNGQAYEALLFHDHVVAHGFKLDQVSYAI 120

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +++GLCK  +   A+Q+L     +    D  ++STI+  +       +AY+L+ ++I   
Sbjct: 121 LMNGLCKMGETRAAMQMLR---KTWVNADVVMYSTIIDSLCKGKFVTDAYRLYSEMIAKG 177

Query: 568 VFEKGTTL 575
           +F    T 
Sbjct: 178 IFPNVYTF 185



 Score = 65.1 bits (157), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 40/177 (22%), Positives = 81/177 (45%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  T N ++   C  GK++ + +L+D M    +  D     +L+  L +   +++A 
Sbjct: 283 INPDVVTYNILIDGLCKLGKISTSLELVDEMRSIGKTVDIITYNSLLHALCKNHHLDQAI 342

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +++ +   G  P+  TY  ++ GLCK G++  A  +  E+   G    V TYN ++  +
Sbjct: 343 TLVKEIKDQGIQPNVCTYTTLIDGLCKDGRLEDAYVIFQEILTEGYHITVWTYNVMINGL 402

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
              G F +A+          C P  ++Y  +I  + ++    +  ++L  M + G S
Sbjct: 403 CKKGLFDEALALLSRMEDNACIPDAVSYETIIYALSEKGETVKTNKLLCAMIVRGLS 459


>gi|359497434|ref|XP_003635514.1| PREDICTED: pentatricopeptide repeat-containing protein At5g64320,
           mitochondrial-like [Vitis vinifera]
          Length = 347

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 107/346 (30%), Positives = 182/346 (52%), Gaps = 4/346 (1%)

Query: 101 HDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIR 160
           H+  L    GP    D  T N ++   C +G L  A +L++ M  +   P+      LI 
Sbjct: 2   HESMLSVGCGP----DIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILID 57

Query: 161 GLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP 220
              +  R+E+A  VL  M   G   + + YN ++  LCK  +++ A+ +  +MS  GC+P
Sbjct: 58  RFCKEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKP 117

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D+ T+N+++  +    KF++A+G ++D L +G     ITY  LI    ++  +  A++++
Sbjct: 118 DIFTFNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLV 177

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           +DM   GC  D +TYN L+   C+ G  +  + +  +++S+G+ PN+I+ N L++ L   
Sbjct: 178 NDMLFRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRT 237

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G      + L  M     +P + TYN LINGLCK G    A+N F+++  +   PD +TY
Sbjct: 238 GNIQHALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITY 297

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           NT++   CKEGM ++A  LL     S   P  +T+  L+    K+G
Sbjct: 298 NTLISWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEG 343



 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 111/343 (32%), Positives = 173/343 (50%), Gaps = 37/343 (10%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+  G  PD  TYN ++ GLCK+G + SA  L++EM + GCEP+VITY  ++      G+
Sbjct: 5   MLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKEGR 64

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
            ++A     +   KG     + Y  LI  +CK   +  A+ +  DM+ +GC PDI T+NS
Sbjct: 65  LEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTFNS 124

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL------- 350
           L+   CK  K+++A+ +  ++L  G+  N+ITYNTL+H+   RG      K++       
Sbjct: 125 LIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDMLFRG 184

Query: 351 -----------------------------DIMNEASHSPTVFTYNILINGLCKYGLVDRA 381
                                        D+M++  + P   + NILINGLC+ G +  A
Sbjct: 185 CPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLN-PNNISCNILINGLCRTGNIQHA 243

Query: 382 INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
           +     M+ +   PDIVTYN+++  LCK G   EAL L   L      P  ITYNTLI  
Sbjct: 244 LEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLISW 303

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
             K+G  + A +L  + +++G  P+++T   L+  F +    E
Sbjct: 304 HCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 97/321 (30%), Positives = 180/321 (56%), Gaps = 2/321 (0%)

Query: 246 KDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQ 305
           +  L  GC P + TY  LI  +CK+  +  A E++++M I+GC P+++TY  L++  CK+
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 306 GKYDDAVLVINNLLSRGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFT 364
           G+ ++A  V++ +  +G+  N++ YN L+ +L       DA++   D M+     P +FT
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGD-MSSKGCKPDIFT 121

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           +N LI GLCK    + A+  +  M+ +    + +TYNT++ A  + G + EAL+L++ + 
Sbjct: 122 FNSLIFGLCKVNKFEEALGLYQDMLLEGVIANTITYNTLIHAFLRRGAMQEALKLVNDML 181

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
              C    ITYN LI  L + G +EK + L+  MM  G++P++I+   LI G CR   ++
Sbjct: 182 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 241

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            A++ L+++  RG       Y  +I+GLCK+ +   A+ + + +      PD   ++T++
Sbjct: 242 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 301

Query: 545 KKVADDGMTEEAYKLWQKLIE 565
                +GM ++A+ L  + ++
Sbjct: 302 SWHCKEGMFDDAHLLLSRGVD 322



 Score =  174 bits (440), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 104/345 (30%), Positives = 181/345 (52%), Gaps = 2/345 (0%)

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
           + M   GC PD+ TYNT++  +   G    A     +   KGC P +ITYTILI++ CK+
Sbjct: 3   ESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFCKE 62

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
             +  A  VLD+M+ +G + + V YN L++  CK  K  DA+ +  ++ S+G +P+  T+
Sbjct: 63  GRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIFTF 122

Query: 331 NTLLHSLGSRGCWD-AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           N+L+  L     ++ A+    D++ E   + T+ TYN LI+   + G +  A+   N M+
Sbjct: 123 NSLIFGLCKVNKFEEALGLYQDMLLEGVIANTI-TYNTLIHAFLRRGAMQEALKLVNDML 181

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            + C  D +TYN ++ ALC+ G + + L L   +     +P  I+ N LI+GL + G ++
Sbjct: 182 FRGCPLDDITYNGLIKALCRAGNIEKGLALFEDMMSKGLNPNNISCNILINGLCRTGNIQ 241

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A+     M+  G++PD +T+ +LI G C+  + +EA++L  ++   G       Y  +I
Sbjct: 242 HALEFLRDMIHRGLTPDIVTYNSLINGLCKTGRAQEALNLFDKLQVEGICPDAITYNTLI 301

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTE 554
              CK    D A  +L   + S + P++  +  +V     +G  E
Sbjct: 302 SWHCKEGMFDDAHLLLSRGVDSGFIPNEVTWYILVSNFIKEGDQE 346



 Score = 52.0 bits (123), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 36/146 (24%), Positives = 60/146 (41%), Gaps = 35/146 (23%)

Query: 454 LYGQMMENGISPDDITHRTLIWG-----------------------------------FC 478
           ++  M+  G  PD  T+ TLI G                                   FC
Sbjct: 1   MHESMLSVGCGPDIFTYNTLILGLCKKGYLVSARELMNEMQIKGCEPNVITYTILIDRFC 60

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           +  ++EEA ++L E+  +G  +    Y  +I  LCK +KV  A+ +   M S   KPD  
Sbjct: 61  KEGRLEEARNVLDEMSGKGLALNAVGYNCLISALCKDEKVQDALNMFGDMSSKGCKPDIF 120

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            F++++  +      EEA  L+Q ++
Sbjct: 121 TFNSLIFGLCKVNKFEEALGLYQDML 146


>gi|297741630|emb|CBI32762.3| unnamed protein product [Vitis vinifera]
          Length = 648

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 195/387 (50%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           ++ GL +   +E   K++  +   G   + +TYN  + G  KR  +     +L  M   G
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              +V+TY  ++    + GK ++A   +++   KG    +  YT +I   C+   + RA+
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + D+M  +G  P   TY +L++  CK G+ + A +++N +  +G++ N + +NTL+   
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D   ++  +M +      VF YN + +GLCK    D A      MV +   P+ 
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 474

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +++ T++   CKEG   EA ++   +      P +ITYN LIDG +K+G M++A  L  +
Sbjct: 475 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 534

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           +   G+ PD  T  +LI G C   +V+ A+ L  E+ +RG       Y  +I GL K  +
Sbjct: 535 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 594

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIV 544
            + A ++ + M  +   PDDTV+S++V
Sbjct: 595 SEEAFKLYDEMKETGLTPDDTVYSSLV 621



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 93/364 (25%), Positives = 179/364 (49%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N  ++ +  R  L   ++++ +M +     +      LI G   I +IE+A ++ + M
Sbjct: 266 TYNAFIEGYFKRLDLGGVAEILTLMEKEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEM 325

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G   D   Y  ++   C+ G ++ A+ L DEM+  G  P   TY  ++  +   G+ 
Sbjct: 326 REKGIEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQM 385

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A     +   KG     + +  LI+  C+   +  A+ +   M  +G   D+  YNS+
Sbjct: 386 EAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSI 445

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            +  CK  + D+A  ++ +++ RG+ PN++++ TL+      G +    ++   M E  +
Sbjct: 446 ASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGN 505

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TYN+LI+G  K G +  A    +++ ++   PD+ T  +++   C +G ++ AL+
Sbjct: 506 VPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALK 565

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +      P ++TY  +I GL+K G  E+A  LY +M E G++PDD  + +L+    
Sbjct: 566 LFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLH 625

Query: 479 RADQ 482
            AD+
Sbjct: 626 SADE 629



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/402 (26%), Positives = 189/402 (47%), Gaps = 1/402 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L   C RG +    KL+D +A +    +       I G  +   +   +++L +M   G
Sbjct: 235 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 294

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              + +TY +++ G    G+I  A  L +EM   G E DV  Y +I+     +G  K+A+
Sbjct: 295 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 354

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   KG  P   TY  LI  VCK   +  A  ++++M  +G   + V +N+L++  
Sbjct: 355 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 414

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G  D+A+ +   +  +G+E +   YN++   L      D    +L  M E   SP  
Sbjct: 415 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 474

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            ++  LI+  CK G    A   F +M  K   P+I+TYN ++    K G + EA +L   
Sbjct: 475 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 534

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L      P + T  +LI G    G ++ A+ L+ +M + G+ P+ +T+  +I G  +  +
Sbjct: 535 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 594

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS-KKVDMAIQ 523
            EEA  L  E+ + G    ++ Y  ++  L  + + + M IQ
Sbjct: 595 SEEAFKLYDEMKETGLTPDDTVYSSLVGSLHSADESISMQIQ 636



 Score =  149 bits (377), Expect = 3e-33,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 216/487 (44%), Gaps = 76/487 (15%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           EK  + + + +       +A +  + M ++    D   C+  +  L R  +++   +  +
Sbjct: 159 EKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFR 218

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF--- 233
            MV         +  +++ GLCKRG +     L+DE++  G + +V+TYN  +   F   
Sbjct: 219 RMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRL 278

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           D G   + +   +   ++G    ++TYT+LI        I  A  + ++M  +G   D+ 
Sbjct: 279 DLGGVAEILTLME---KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 335

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y S+++ +C+ G    A+++ + +  +G+                              
Sbjct: 336 VYTSIISCNCRSGNVKRALVLFDEMTDKGL------------------------------ 365

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P+  TY  LI+G+CK G ++ A    N+M  K    + V +NT++   C+ GM+
Sbjct: 366 -----IPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 420

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +EAL+L  ++        +  YN++  GL K    ++A  L   M+E G+SP+ ++  TL
Sbjct: 421 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 480

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGN---------------KMRN--SAYRL--------- 507
           I  +C+     EA  + +E+ ++GN               K  N   A++L         
Sbjct: 481 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 540

Query: 508 ---------VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                    +IHG C   KVDMA+++ + M      P+   ++ ++  ++ DG +EEA+K
Sbjct: 541 IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFK 600

Query: 559 LWQKLIE 565
           L+ ++ E
Sbjct: 601 LYDEMKE 607



 Score =  132 bits (331), Expect = 6e-28,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 140/295 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      I+   C  G +  A  L D M  +  IP  H    LI G+ +  ++E A 
Sbjct: 330 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 389

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M   G   + + +N ++ G C+ G +  A+ L   M   G E DV  YN+I   +
Sbjct: 390 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 449

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +  +A G     + +G  P  +++T LI+  CK+     A  V  +M  +G  P+I
Sbjct: 450 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 509

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TYN L++   K+G   +A  + + L +RG+ P+  T  +L+H     G  D   K+ D 
Sbjct: 510 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 569

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           M +    P V TY  +I+GL K G  + A   +++M      PD   Y++++G+L
Sbjct: 570 MPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 624


>gi|115476328|ref|NP_001061760.1| Os08g0402600 [Oryza sativa Japonica Group]
 gi|113623729|dbj|BAF23674.1| Os08g0402600, partial [Oryza sativa Japonica Group]
          Length = 554

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 117/476 (24%), Positives = 222/476 (46%), Gaps = 36/476 (7%)

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP-DT 187
           S G+  D  +   I+A     PD       ++  +    + +A  +L+ M   G  P + 
Sbjct: 4   SLGRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNA 63

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            +YN+++ G+ + G+   A+ + DEM+     P+ ITYNT++      G  +        
Sbjct: 64  FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQ 123

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            +  G  P  ITY +L+  +C+   +     +LD+MA +   PD  TY+ L +   + G 
Sbjct: 124 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 183

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
               + +    L  G+     T + LL+ L   G     +++L  +  A   PT   YN 
Sbjct: 184 SKAMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 243

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           LING C+ G ++ A ++F QM S++ +PD +TYN ++  LCK   +  A  LL  +  + 
Sbjct: 244 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 303

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            +P + T+NTLID   + G +EK  ++  +M ENG+ P+ +++ +++  FC+  ++ EAV
Sbjct: 304 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 363

Query: 488 DLLKEIGKRG----------------------------NKMRNSA-------YRLVIHGL 512
            +L ++  +                              KM+++        Y L+I GL
Sbjct: 364 AILDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGL 423

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           C   ++  A +++  + + R  PD   ++T++      G  ++A  L Q++ ++ +
Sbjct: 424 CNQSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 479



 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 196/415 (47%), Gaps = 35/415 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHF----------------------- 154
           T N +L   C  G++ + S L+D MA +  +PD F +                       
Sbjct: 135 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKY 194

Query: 155 -----------CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
                      C  L+ GL +  ++  A +VLQ +V +G VP  + YN ++ G C+ G++
Sbjct: 195 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 254

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A +   +M     +PD ITYN ++  +    +   A     +    G  P + T+  L
Sbjct: 255 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 314

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+   +   + +   VL +M   G  P++V+Y S+VN  CK GK  +AV +++++  + +
Sbjct: 315 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 374

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN+  YN ++ +    G  D    +++ M     SP++ TYN+LI GLC    +  A  
Sbjct: 375 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 434

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
             N + +    PD V+YNT++ A C  G +++AL L   ++       + TY+ LI GL 
Sbjct: 435 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 494

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
             G + +   LY +MM+N + P +  H  ++  + +     +A DL KE+ ++ N
Sbjct: 495 GAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRN 549



 Score =  179 bits (454), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 225/483 (46%), Gaps = 37/483 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMV 179
           N ++      G+  DA ++ D M  R  +P+ H   N +I G I+   +E   ++   MV
Sbjct: 67  NVVIAGMWRAGRGGDAVEVFDEMTERAVLPN-HITYNTMIDGHIKGGDLEAGFRLRDQMV 125

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  P+ ITYN+++ GLC+ G++    ALLDEM+     PD  TY+ +   +  NG  K
Sbjct: 126 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 185

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA--------------- 284
             +  +   L+ G      T +IL+  +CK   ++ A EVL  +                
Sbjct: 186 AMLSLFGKYLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 245

Query: 285 --------IEGC------------SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
                   +EG              PD +TYN+L+N  CK  +  +A  ++  +   G+ 
Sbjct: 246 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 305

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P   T+NTL+ + G  G  +    +L  M E    P V +Y  ++N  CK G +  A+  
Sbjct: 306 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 365

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            + M  K+  P+   YN ++ A  + G  ++A  L+  +  +  SP ++TYN LI GL  
Sbjct: 366 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCN 425

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           +  + +A  +   +  + + PD +++ TLI   C    +++A+DL + + K G K     
Sbjct: 426 QSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRT 485

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I GL  + +++    + + M+ +   P + + + +V+  +  G   +A  L ++++
Sbjct: 486 YHQLISGLGGAGRLNEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 545

Query: 565 EWK 567
           + +
Sbjct: 546 QKR 548



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 204/484 (42%), Gaps = 36/484 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINL-IRGLIRIDRIEKASKVLQIMV 179
           NK +Q   + G L +A  ++  M R    P   F  N+ I G+ R  R   A +V   M 
Sbjct: 31  NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 90

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
               +P+ ITYN M+ G  K G + +   L D+M   G +P+ ITYN +L  +   G+  
Sbjct: 91  ERAVLPNHITYNTMIDGHIKGGDLEAGFRLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 150

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +      +   +   P   TY+IL + + +       + +       G +    T + L+
Sbjct: 151 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKYLKNGVTIGDYTCSILL 210

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  CK GK   A  V+ +L++ G+ P  + YNTL++     G  +        M      
Sbjct: 211 NGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 270

Query: 360 PTVFTYNILINGLCKYGLVDRA---------------INSFN------------------ 386
           P   TYN LINGLCK   +  A               + +FN                  
Sbjct: 271 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 330

Query: 387 --QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M     +P++V+Y +++ A CK G + EA+ +L  +      P    YN +ID   +
Sbjct: 331 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 390

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G  ++A +L  +M  NGISP  +T+  LI G C   Q+ EA +++  +          +
Sbjct: 391 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 450

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I   C    +D A+ + + M     K     +  ++  +   G   E   L+QK++
Sbjct: 451 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQKMM 510

Query: 565 EWKV 568
           +  V
Sbjct: 511 QNNV 514



 Score =  122 bits (307), Expect = 4e-25,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 137/284 (48%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++   C   ++T+A  L+  M      P       LI    R  ++EK  
Sbjct: 269 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 328

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL  M  +G  P+ ++Y  +V   CK G+I  A+A+LD+M      P+   YN I+   
Sbjct: 329 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 388

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            ++G   QA    +     G  P ++TY +LI+ +C Q  I+ A E+++ ++     PD 
Sbjct: 389 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 448

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V+YN+L++  C +G  D A+ +   +   G++    TY+ L+  LG  G  + ++ +   
Sbjct: 449 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLNEMEYLYQK 508

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           M + +  P+   +NI++    KYG   +A +   +M+ K    D
Sbjct: 509 MMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 552


>gi|125561476|gb|EAZ06924.1| hypothetical protein OsI_29163 [Oryza sativa Indica Group]
          Length = 687

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 221/474 (46%), Gaps = 36/474 (7%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP-DTIT 189
           G+  D  +   I+A     PD       ++  +    + +A  +L+ M   G  P +  +
Sbjct: 139 GRHADVRRAFGILASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFS 198

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           YN+++ G+ + G+   A+ + DEM+     P+ ITYNT++      G  +         +
Sbjct: 199 YNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMV 258

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
             G  P  ITY +L+  +C+   +     +LD+MA +   PD  TY+ L +   + G   
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
             + +    L  G+     T + LL+ L   G     +++L  +  A   PT   YN LI
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 378

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           NG C+ G ++ A ++F QM S++ +PD +TYN ++  LCK   +  A  LL  +  +  +
Sbjct: 379 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 438

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P + T+NTLID   + G +EK  ++  +M ENG+ P+ +++ +++  FC+  ++ EAV +
Sbjct: 439 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 498

Query: 490 LKEIGKRG----------------------------NKMRNSA-------YRLVIHGLCK 514
           L ++  +                              KM+++        Y L+I GLC 
Sbjct: 499 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCN 558

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             ++  A +++  + + R  PD   ++T++      G  ++A  L Q++ ++ +
Sbjct: 559 QSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGI 612



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 111/415 (26%), Positives = 196/415 (47%), Gaps = 35/415 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPD-FHF----------------------- 154
           T N +L   C  G++ + S L+D MA +  +PD F +                       
Sbjct: 268 TYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKS 327

Query: 155 -----------CINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
                      C  L+ GL +  ++  A +VLQ +V +G VP  + YN ++ G C+ G++
Sbjct: 328 LKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGEL 387

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A +   +M     +PD ITYN ++  +    +   A     +    G  P + T+  L
Sbjct: 388 EGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTL 447

Query: 264 IEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM 323
           I+   +   + +   VL +M   G  P++V+Y S+VN  CK GK  +AV +++++  + +
Sbjct: 448 IDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDV 507

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            PN+  YN ++ +    G  D    +++ M     SP++ TYN+LI GLC    +  A  
Sbjct: 508 LPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEE 567

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
             N + +    PD V+YNT++ A C  G +++AL L   ++       + TY+ LI GL 
Sbjct: 568 IINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLG 627

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
             G + +   LY +MM+N + P +  H  ++  + +     +A DL KE+ ++ N
Sbjct: 628 GAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRN 682



 Score =  177 bits (449), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 223/483 (46%), Gaps = 37/483 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMV 179
           N ++      G+  DA ++ D M  R  +P+ H   N +I G I+   +E    +   MV
Sbjct: 200 NVVIAGMWRAGRGGDAVEVFDEMTERAVLPN-HITYNTMIDGHIKGGDLEAGFSLRDQMV 258

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G  P+ ITYN+++ GLC+ G++    ALLDEM+     PD  TY+ +   +  NG  K
Sbjct: 259 CHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSK 318

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA--------------- 284
             +  +   L+ G      T +IL+  +CK   ++ A EVL  +                
Sbjct: 319 AMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLI 378

Query: 285 --------IEGC------------SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
                   +EG              PD +TYN+L+N  CK  +  +A  ++  +   G+ 
Sbjct: 379 NGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVN 438

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
           P   T+NTL+ + G  G  +    +L  M E    P V +Y  ++N  CK G +  A+  
Sbjct: 439 PTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAI 498

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            + M  K+  P+   YN ++ A  + G  ++A  L+  +  +  SP ++TYN LI GL  
Sbjct: 499 LDDMFHKDVLPNAQVYNAIIDAYVEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCN 558

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           +  + +A  +   +  + + PD +++ TLI   C    +++A+DL + + K G K     
Sbjct: 559 QSQISEAEEIINSLSNHRLIPDAVSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRT 618

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I GL  + ++     + + M+ +   P + + + +V+  +  G   +A  L ++++
Sbjct: 619 YHQLISGLGGAGRLIEMEYLYQKMMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEML 678

Query: 565 EWK 567
           + +
Sbjct: 679 QKR 681



 Score =  170 bits (430), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 122/484 (25%), Positives = 205/484 (42%), Gaps = 36/484 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINL-IRGLIRIDRIEKASKVLQIMV 179
           NK +Q   + G L +A  ++  M R    P   F  N+ I G+ R  R   A +V   M 
Sbjct: 164 NKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMT 223

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
               +P+ ITYN M+ G  K G + +  +L D+M   G +P+ ITYN +L  +   G+  
Sbjct: 224 ERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMG 283

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +      +   +   P   TY+IL + + +       + +       G +    T + L+
Sbjct: 284 ETSALLDEMASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGVTIGDYTCSILL 343

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           N  CK GK   A  V+ +L++ G+ P  + YNTL++     G  +        M      
Sbjct: 344 NGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNTLINGYCQTGELEGAFSTFGQMKSRHIK 403

Query: 360 PTVFTYNILINGLCKYGLVDRA---------------INSFN------------------ 386
           P   TYN LINGLCK   +  A               + +FN                  
Sbjct: 404 PDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCFIV 463

Query: 387 --QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             +M     +P++V+Y +++ A CK G + EA+ +L  +      P    YN +ID   +
Sbjct: 464 LSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAYVE 523

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G  ++A +L  +M  NGISP  +T+  LI G C   Q+ EA +++  +          +
Sbjct: 524 HGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDAVS 583

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y  +I   C    +D A+ + + M     K     +  ++  +   G   E   L+QK++
Sbjct: 584 YNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQKMM 643

Query: 565 EWKV 568
           +  V
Sbjct: 644 QNNV 647



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 101/372 (27%), Positives = 174/372 (46%), Gaps = 4/372 (1%)

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC-PPYL 257
           +   +R A  +L   + +G  PD   +N  ++     G   +A+G  +   R G  PP  
Sbjct: 140 RHADVRRAFGIL---ASAGARPDTFAWNKAVQACVAAGDLGEAVGMLRRMGRDGAPPPNA 196

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
            +Y ++I  + +      A+EV D+M      P+ +TYN++++   K G  +    + + 
Sbjct: 197 FSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHITYNTMIDGHIKGGDLEAGFSLRDQ 256

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           ++  G++PN+ITYN LL  L   G       +LD M      P  FTY+IL +GL + G 
Sbjct: 257 MVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEMASQKMVPDGFTYSILFDGLSRNGD 316

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
               ++ F + +         T + +L  LCK+G ++ A ++L  L  +   P  + YNT
Sbjct: 317 SKAMLSLFGKSLKNGVTIGDYTCSILLNGLCKDGKVSIAEEVLQSLVNAGLVPTRVIYNT 376

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+G  + G +E A   +GQM    I PD IT+  LI G C+A+++  A DLL E+   G
Sbjct: 377 LINGYCQTGELEGAFSTFGQMKSRHIKPDHITYNALINGLCKAERITNAQDLLMEMQDNG 436

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                  +  +I    ++ +++    VL  M  +  KP+   + +IV     +G   EA 
Sbjct: 437 VNPTVETFNTLIDAYGRTGQLEKCFIVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAV 496

Query: 558 KLWQKLIEWKVF 569
            +   +    V 
Sbjct: 497 AILDDMFHKDVL 508



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 76/284 (26%), Positives = 136/284 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++   C   ++T+A  L+  M      P       LI    R  ++EK  
Sbjct: 402 IKPDHITYNALINGLCKAERITNAQDLLMEMQDNGVNPTVETFNTLIDAYGRTGQLEKCF 461

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            VL  M  +G  P+ ++Y  +V   CK G+I  A+A+LD+M      P+   YN I+   
Sbjct: 462 IVLSEMQENGLKPNVVSYGSIVNAFCKNGKIPEAVAILDDMFHKDVLPNAQVYNAIIDAY 521

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            ++G   QA    +     G  P ++TY +LI+ +C Q  I+ A E+++ ++     PD 
Sbjct: 522 VEHGPNDQAFILVEKMKSNGISPSIVTYNLLIKGLCNQSQISEAEEIINSLSNHRLIPDA 581

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V+YN+L++  C +G  D A+ +   +   G++    TY+ L+  LG  G    ++ +   
Sbjct: 582 VSYNTLISACCYRGNIDKALDLQQRMHKYGIKSTVRTYHQLISGLGGAGRLIEMEYLYQK 641

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           M + +  P+   +NI++    KYG   +A +   +M+ K    D
Sbjct: 642 MMQNNVVPSNAIHNIMVEAYSKYGNEIKAEDLRKEMLQKRNNHD 685



 Score = 72.4 bits (176), Expect = 6e-10,   Method: Compositional matrix adjust.
 Identities = 52/220 (23%), Positives = 103/220 (46%), Gaps = 2/220 (0%)

Query: 351 DIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           D+ +EA    P++ + N+L+  L   G       +F  + S   +PD   +N  + A   
Sbjct: 113 DLADEARAPLPSLSSCNLLLEALLSLGRHADVRRAFGILASAGARPDTFAWNKAVQACVA 172

Query: 410 EGMLNEALQLLHLLNGSSCSPC-LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
            G L EA+ +L  +      P    +YN +I G+ + G    A+ ++ +M E  + P+ I
Sbjct: 173 AGDLGEAVGMLRRMGRDGAPPPNAFSYNVVIAGMWRAGRGGDAVEVFDEMTERAVLPNHI 232

Query: 469 THRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           T+ T+I G  +   +E    L  ++   G K     Y +++ GLC++ ++     +L+ M
Sbjct: 233 TYNTMIDGHIKGGDLEAGFSLRDQMVCHGLKPNAITYNVLLSGLCRAGRMGETSALLDEM 292

Query: 529 ISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            S +  PD   +S +   ++ +G ++    L+ K ++  V
Sbjct: 293 ASQKMVPDGFTYSILFDGLSRNGDSKAMLSLFGKSLKNGV 332


>gi|449481246|ref|XP_004156125.1| PREDICTED: LOW QUALITY PROTEIN: putative pentatricopeptide
           repeat-containing protein At2g02150-like [Cucumis
           sativus]
          Length = 822

 Score =  189 bits (479), Expect = 4e-45,   Method: Compositional matrix adjust.
 Identities = 114/437 (26%), Positives = 214/437 (48%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           F   G L +A++    M     +P    C  L+  L +    +   K    M+ +G  P 
Sbjct: 170 FVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPS 229

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
             TYN+M+  LCK G + ++  L  +M   G  PDV+TYN+++      G  ++    + 
Sbjct: 230 VFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFN 289

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           +    GC P +ITY  LI   CK   + RA E   +M   G  P++VTY++L++  CK+G
Sbjct: 290 EMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEG 349

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
               A+ ++ ++   G+ PN  TY +L+ +    G      K+L+ M +A     + TY 
Sbjct: 350 MMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYT 409

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            L++GLCK G +  A   F  M+     P+   Y  ++    K   + +A+++L  +   
Sbjct: 410 ALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTEC 469

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
           +  P LI Y ++I G   +  +E+  ++  +M   GIS + +   T+I  + +A +  +A
Sbjct: 470 NIKPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDA 529

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           ++  +E+   G +     Y ++I GLC++  V++A+     M+S   +P+  V+++++  
Sbjct: 530 LNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDG 589

Query: 547 VADDGMTEEAYKLWQKL 563
           +  +   E A KL+ ++
Sbjct: 590 LCXNNCIESAKKLFDEM 606



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 125/447 (27%), Positives = 210/447 (46%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G L ++ +L   M      PD     +LI G  ++  +E+ + +   M
Sbjct: 232 TYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEM 291

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VPD ITYN ++   CK  ++  A     EM  +G +P+V+TY+T++      G  
Sbjct: 292 KDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMM 351

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + AI    D  R G  P   TYT LI+  CK   +  A ++L+DM   G   +IVTY +L
Sbjct: 352 QGAIKLLXDMRRTGLLPNEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTAL 411

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  CK G+  +A  V  ++L  G+ PN   Y  L+H        +   KIL  M E + 
Sbjct: 412 LDGLCKAGRMIEAEEVFRSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNI 471

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +  Y  +I G C    ++       +M S+    + V   T++ A  K G  ++AL 
Sbjct: 472 KPDLILYGSIIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALN 531

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               +        ++TY  LIDGL + G +E A+  + +M+  G+ P+   + +LI G C
Sbjct: 532 FFQEMQDVGVEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLC 591

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
             + +E A  L  E+  RG     +A+  +I G  K   +  A+ ++  M     + D  
Sbjct: 592 XNNCIESAKKLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLH 651

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
           V++++V   +  G   +A K + ++IE
Sbjct: 652 VYTSLVSGFSQCGELHQARKFFNEMIE 678



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 102/417 (24%), Positives = 189/417 (45%), Gaps = 35/417 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N ++  +   G L + + L + M     +PD      LI    + +++ +A +  
Sbjct: 264 DVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYF 323

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  +G  P+ +TY+ ++   CK G ++ AI LL +M  +G  P+  TY +++      
Sbjct: 324 SEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFTYTSLIDANCKA 383

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS------ 289
           G   +A     D L+ G    ++TYT L++ +CK   +  A EV   M  +G S      
Sbjct: 384 GNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSMLKDGISPNQQVY 443

Query: 290 -----------------------------PDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
                                        PD++ Y S++   C Q K ++  L++  + S
Sbjct: 444 TALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQRKLEETKLILEEMKS 503

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           RG+  N +   T++ +    G           M +     T+ TY +LI+GLC+ G+V+ 
Sbjct: 504 RGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTYCVLIDGLCEAGIVEL 563

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A++ F +M+S   QP++  Y +++  LC    +  A +L   +     +P +  +  LID
Sbjct: 564 AVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQCRGMTPDITAFTALID 623

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           G  K G +++A+VL  +M E  I  D   + +L+ GF +  ++ +A     E+ ++G
Sbjct: 624 GNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGFSQCGELHQARKFFNEMIEKG 680



 Score =  138 bits (347), Expect = 9e-30,   Method: Compositional matrix adjust.
 Identities = 80/276 (28%), Positives = 138/276 (50%)

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           P   + N L++   K G         N+++  G+ P+  TYN ++  L   G  +   ++
Sbjct: 193 PKARSCNFLLHRLSKSGNGQLVRKFFNDMIGAGIAPSVFTYNVMIDYLCKEGDLENSRRL 252

Query: 350 LDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              M E   SP V TYN LI+G  K G ++   + FN+M    C PDI+TYN ++   CK
Sbjct: 253 FVQMREMGLSPDVVTYNSLIDGYGKVGSLEEVASLFNEMKDVGCVPDIITYNGLINCYCK 312

Query: 410 EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
              +  A +    +  +   P ++TY+TLID   K+G M+ A+ L   M   G+ P++ T
Sbjct: 313 FEKMPRAFEYFSEMKNNGLKPNVVTYSTLIDAFCKEGMMQGAIKLLXDMRRTGLLPNEFT 372

Query: 470 HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           + +LI   C+A  + EA  LL ++ + G K+    Y  ++ GLCK+ ++  A +V   M+
Sbjct: 373 YTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVFRSML 432

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
                P+  V++ +V         E+A K+ +++ E
Sbjct: 433 KDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTE 468



 Score =  112 bits (281), Expect = 4e-22,   Method: Compositional matrix adjust.
 Identities = 85/380 (22%), Positives = 167/380 (43%), Gaps = 35/380 (9%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E T   ++   C  G LT+A KL++ M +     +      L+ GL +  R+ +A +V 
Sbjct: 369 NEFTYTSLIDANCKAGNLTEAWKLLNDMLQAGVKLNIVTYTALLDGLCKAGRMIEAEEVF 428

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+  G  P+   Y  +V G  K  ++  A+ +L +M+    +PD+I Y +I+      
Sbjct: 429 RSMLKDGISPNQQVYTALVHGYIKAERMEDAMKILKQMTECNIKPDLILYGSIIWGHCSQ 488

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K ++     ++   +G     +  T +I+   K    + A+    +M   G    IVTY
Sbjct: 489 RKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVGVEATIVTY 548

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
             L++  C+ G  + AV     +LS G++PN   Y +L+  L    C ++  K+ D M  
Sbjct: 549 CVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAKKLFDEMQC 608

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
              +P +  +  LI+G  K+G +  A+   ++M     + D+  Y               
Sbjct: 609 RGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVY--------------- 653

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
                                +L+ G ++ G + +A   + +M+E GI P+++    L+ 
Sbjct: 654 --------------------TSLVSGFSQCGELHQARKFFNEMIEKGILPEEVLCICLLR 693

Query: 476 GFCRADQVEEAVDLLKEIGK 495
            + +  Q++EA++L  E+ +
Sbjct: 694 EYYKRGQLDEAIELKNEMER 713



 Score = 92.4 bits (228), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 56/196 (28%), Positives = 100/196 (51%)

Query: 364 TYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL 423
            +++L +   + GL++ A   F++M +    P   + N +L  L K G      +  + +
Sbjct: 162 VFDVLFSVFVELGLLEEANECFSRMRNFRTLPKARSCNFLLHRLSKSGNGQLVRKFFNDM 221

Query: 424 NGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQV 483
            G+  +P + TYN +ID L K+G +E +  L+ QM E G+SPD +T+ +LI G+ +   +
Sbjct: 222 IGAGIAPSVFTYNVMIDYLCKEGDLENSRRLFVQMREMGLSPDVVTYNSLIDGYGKVGSL 281

Query: 484 EEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
           EE   L  E+   G       Y  +I+  CK +K+  A +    M ++  KP+   +ST+
Sbjct: 282 EEVASLFNEMKDVGCVPDIITYNGLINCYCKFEKMPRAFEYFSEMKNNGLKPNVVTYSTL 341

Query: 544 VKKVADDGMTEEAYKL 559
           +     +GM + A KL
Sbjct: 342 IDAFCKEGMMQGAIKL 357



 Score = 67.8 bits (164), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/244 (21%), Positives = 102/244 (41%), Gaps = 3/244 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+   CS+ KL +   +++ M  R    +      +I    +  +   A    Q M   G
Sbjct: 481 IIWGHCSQRKLEETKLILEEMKSRGISANPVISTTIIDAYFKAGKSSDALNFFQEMQDVG 540

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
                +TY +++ GLC+ G +  A+     M   G +P+V  Y +++  +  N   + A 
Sbjct: 541 VEATIVTYCVLIDGLCEAGIVELAVDYFCRMLSLGLQPNVAVYTSLIDGLCXNNCIESAK 600

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   +G  P +  +T LI+   K   +  A+ ++  M       D+  Y SLV+  
Sbjct: 601 KLFDEMQCRGMTPDITAFTALIDGNLKHGNLQEALVLISRMTELAIEFDLHVYTSLVSGF 660

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            + G+   A    N ++ +G+ P  +    LL     RG    +D+ +++ NE       
Sbjct: 661 SQCGELHQARKFFNEMIEKGILPEEVLCICLLREYYKRG---QLDEAIELKNEMERMAYS 717

Query: 363 FTYN 366
           F ++
Sbjct: 718 FEFD 721


>gi|15236546|ref|NP_194913.1| proton gradient regulation 3 [Arabidopsis thaliana]
 gi|75213543|sp|Q9SZ52.1|PP344_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At4g31850, chloroplastic; AltName: Full=Protein PROTON
           GRADIENT REGULATION 3; Flags: Precursor
 gi|4584524|emb|CAB40755.1| putative protein [Arabidopsis thaliana]
 gi|7270088|emb|CAB79903.1| putative protein [Arabidopsis thaliana]
 gi|332660567|gb|AEE85967.1| proton gradient regulation 3 [Arabidopsis thaliana]
          Length = 1112

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 123/462 (26%), Positives = 216/462 (46%), Gaps = 39/462 (8%)

Query: 138 KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGL 197
           K ++ +  +  +  F  CI   R L R  +I +A ++L+ M   G  PD +TY +++  L
Sbjct: 247 KEMETLGLKPNVYTFTICI---RVLGRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDAL 303

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C   ++  A  + ++M     +PD +TY T+L    DN        FW +  + G  P +
Sbjct: 304 CTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDV 363

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
           +T+TIL++ +CK      A + LD M  +G  P++ TYN+L+    +  + DDA+ +  N
Sbjct: 364 VTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRVHRLDDALELFGN 423

Query: 318 LLSRGMEPNSITY-----------------------------------NTLLHSLGSRGC 342
           + S G++P + TY                                   N  L+SL   G 
Sbjct: 424 MESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVACNASLYSLAKAGR 483

Query: 343 WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT 402
                +I   + +    P   TYN+++    K G +D AI   ++M+   C+PD++  N+
Sbjct: 484 DREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNS 543

Query: 403 VLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG 462
           ++  L K   ++EA ++   +      P ++TYNTL+ GL K G +++A+ L+  M++ G
Sbjct: 544 LINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKG 603

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
             P+ IT  TL    C+ D+V  A+ +L ++   G       Y  +I GL K+ +V  A+
Sbjct: 604 CPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLVKNGQVKEAM 663

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
                M    Y PD     T++  V    + E+AYK+    +
Sbjct: 664 CFFHQMKKLVY-PDFVTLCTLLPGVVKASLIEDAYKIITNFL 704



 Score =  180 bits (456), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 133/488 (27%), Positives = 225/488 (46%), Gaps = 35/488 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T   I ++   +G L  A   +  M     + + +    LI  L++     +A 
Sbjct: 149 IKRDTNTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAM 208

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V + M++ G  P   TY+ ++ GL KR  I S + LL EM   G +P+V T+   +R +
Sbjct: 209 EVYRRMILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVL 268

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLD----------- 281
              GK  +A    K    +GC P ++TYT+LI+ +C    +  A EV +           
Sbjct: 269 GRAGKINEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDR 328

Query: 282 ------------------------DMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                   +M  +G  PD+VT+  LV+  CK G + +A   ++ 
Sbjct: 329 VTYITLLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDV 388

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +  +G+ PN  TYNTL+  L      D   ++   M      PT +TY + I+   K G 
Sbjct: 389 MRDQGILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGD 448

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
              A+ +F +M +K   P+IV  N  L +L K G   EA Q+ + L      P  +TYN 
Sbjct: 449 SVSALETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNM 508

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           ++   +K G +++A+ L  +MMENG  PD I   +LI    +AD+V+EA  +   + +  
Sbjct: 509 MMKCYSKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMK 568

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K     Y  ++ GL K+ K+  AI++ E M+     P+   F+T+   +  +     A 
Sbjct: 569 LKPTVVTYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLAL 628

Query: 558 KLWQKLIE 565
           K+  K+++
Sbjct: 629 KMLFKMMD 636



 Score =  174 bits (440), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 114/380 (30%), Positives = 177/380 (46%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++   C+  KL  A ++ + M      PD    I L+        ++   +  
Sbjct: 292 DVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYITLLDRFSDNRDLDSVKQFW 351

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G VPD +T+ ++V  LCK G    A   LD M   G  P++ TYNT++  +   
Sbjct: 352 SEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQGILPNLHTYNTLICGLLRV 411

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            +   A+  + +    G  P   TY + I+   K      A+E  + M  +G +P+IV  
Sbjct: 412 HRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSALETFEKMKTKGIAPNIVAC 471

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+ +    K G+  +A  +   L   G+ P+S+TYN ++      G  D   K+L  M E
Sbjct: 472 NASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCYSKVGEIDEAIKLLSEMME 531

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P V   N LIN L K   VD A   F +M     +P +VTYNT+L  L K G + E
Sbjct: 532 NGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQE 591

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A++L   +    C P  IT+NTL D L K   +  A+ +  +MM+ G  PD  T+ T+I+
Sbjct: 592 AIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIF 651

Query: 476 GFCRADQVEEAVDLLKEIGK 495
           G  +  QV+EA+    ++ K
Sbjct: 652 GLVKNGQVKEAMCFFHQMKK 671



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 127/463 (27%), Positives = 228/463 (49%), Gaps = 19/463 (4%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D    N ++       ++ +A K+   M      P       L+ GL +  +I++A +
Sbjct: 535 EPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKLKPTVVTYNTLLAGLGKNGKIQEAIE 594

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           + + MV  G  P+TIT+N +   LCK  ++  A+ +L +M   GC PDV TYNTI+  + 
Sbjct: 595 LFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKMMDMGCVPDVFTYNTIIFGLV 654

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS--PD 291
            NG+ K+A+ F+  Q++K   P  +T   L+  V K   I  A +++ +  +  C+  P 
Sbjct: 655 KNGQVKEAMCFFH-QMKKLVYPDFVTLCTLLPGVVKASLIEDAYKIITNF-LYNCADQPA 712

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM--EPNSITYNTLLHSL------GSRGCW 343
            + +  L+     +   D+AV     L++ G+  + +SI    + +S       G+R  +
Sbjct: 713 NLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSCKHNNVSGARTLF 772

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           +   K L +       P + TYN+LI GL +  +++ A + F Q+ S  C PD+ TYN +
Sbjct: 773 EKFTKDLGV------QPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDVATYNFL 826

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMM-ENG 462
           L A  K G ++E  +L   ++   C    IT+N +I GL K G ++ A+ LY  +M +  
Sbjct: 827 LDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYDLMSDRD 886

Query: 463 ISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI 522
            SP   T+  LI G  ++ ++ EA  L + +   G +   + Y ++I+G  K+ + D A 
Sbjct: 887 FSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAGEADAAC 946

Query: 523 QVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            + + M+    +PD   +S +V  +   G  +E    +++L E
Sbjct: 947 ALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKE 989



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/476 (25%), Positives = 220/476 (46%), Gaps = 11/476 (2%)

Query: 104 SLPSSDGPF-----------VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDF 152
           S P +D  F           + +  +T N +L+     GKL + + + D+M +R    D 
Sbjct: 94  SFPDTDSSFSYFKSVAGNLNLVHTTETCNYMLEALRVDGKLEEMAYVFDLMQKRIIKRDT 153

Query: 153 HFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDE 212
           +  + + + L     +++A   L+ M   G V +  +YN ++  L K      A+ +   
Sbjct: 154 NTYLTIFKSLSVKGGLKQAPYALRKMREFGFVLNAYSYNGLIHLLLKSRFCTEAMEVYRR 213

Query: 213 MSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCG 272
           M + G  P + TY++++  +         +G  K+    G  P + T+TI I  + +   
Sbjct: 214 MILEGFRPSLQTYSSLMVGLGKRRDIDSVMGLLKEMETLGLKPNVYTFTICIRVLGRAGK 273

Query: 273 IARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
           I  A E+L  M  EGC PD+VTY  L++  C   K D A  V   + +   +P+ +TY T
Sbjct: 274 INEAYEILKRMDDEGCGPDVVTYTVLIDALCTARKLDCAKEVFEKMKTGRHKPDRVTYIT 333

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           LL         D+V +    M +  H P V T+ IL++ LCK G    A ++ + M  + 
Sbjct: 334 LLDRFSDNRDLDSVKQFWSEMEKDGHVPDVVTFTILVDALCKAGNFGEAFDTLDVMRDQG 393

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             P++ TYNT++  L +   L++AL+L   +      P   TY   ID   K G    A+
Sbjct: 394 ILPNLHTYNTLICGLLRVHRLDDALELFGNMESLGVKPTAYTYIVFIDYYGKSGDSVSAL 453

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
             + +M   GI+P+ +     ++   +A +  EA  +   +   G    +  Y +++   
Sbjct: 454 ETFEKMKTKGIAPNIVACNASLYSLAKAGRDREAKQIFYGLKDIGLVPDSVTYNMMMKCY 513

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            K  ++D AI++L  M+ +  +PD  V ++++  +      +EA+K++ ++ E K+
Sbjct: 514 SKVGEIDEAIKLLSEMMENGCEPDVIVVNSLINTLYKADRVDEAWKMFMRMKEMKL 569



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 129/485 (26%), Positives = 216/485 (44%), Gaps = 41/485 (8%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N +L      GK+ +A +L + M ++   P+      L   L + D +  A K+L  M
Sbjct: 575  TYNTLLAGLGKNGKIQEAIELFEGMVQKGCPPNTITFNTLFDCLCKNDEVTLALKMLFKM 634

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            +  G VPD  TYN ++ GL K GQ++ A+    +M      PD +T  T+L  +      
Sbjct: 635  MDMGCVPDVFTYNTIIFGLVKNGQVKEAMCFFHQMK-KLVYPDFVTLCTLLPGVVKASLI 693

Query: 239  KQAIG----------------FWKDQLRKGCPPYLITYTI-------------------- 262
            + A                  FW+D +        I   +                    
Sbjct: 694  EDAYKIITNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILV 753

Query: 263  -LIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
             +I   CK   ++ A  + +    + G  P + TYN L+    +    + A  V   + S
Sbjct: 754  PIIRYSCKHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKS 813

Query: 321  RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
             G  P+  TYN LL + G  G  D + ++   M+         T+NI+I+GL K G VD 
Sbjct: 814  TGCIPDVATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDD 873

Query: 381  AINSFNQMVS-KNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A++ +  ++S ++  P   TY  ++  L K G L EA QL   +    C P    YN LI
Sbjct: 874  ALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILI 933

Query: 440  DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
            +G  K G  + A  L+ +M++ G+ PD  T+  L+   C   +V+E +   KE+ + G  
Sbjct: 934  NGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLN 993

Query: 500  MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR-YKPDDTVFSTIVKKVADDGMTEEAYK 558
                 Y L+I+GL KS +++ A+ +   M +SR   PD   +++++  +   GM EEA K
Sbjct: 994  PDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGK 1053

Query: 559  LWQKL 563
            ++ ++
Sbjct: 1054 IYNEI 1058



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 210/468 (44%), Gaps = 41/468 (8%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T N I+      G++ +A      M ++   PDF     L+ G+++   IE A K++
Sbjct: 642  DVFTYNTIIFGLVKNGQVKEAMCFFHQM-KKLVYPDFVTLCTLLPGVVKASLIEDAYKII 700

Query: 176  Q--------------------IMVMSGGVPDTITYN--MMVGGLCKRG------------ 201
                                  ++   G+ + ++++  ++  G+C+ G            
Sbjct: 701  TNFLYNCADQPANLFWEDLIGSILAEAGIDNAVSFSERLVANGICRDGDSILVPIIRYSC 760

Query: 202  ---QIRSAIALLDEMSVS-GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
                +  A  L ++ +   G +P + TYN ++  + +    + A   +      GC P +
Sbjct: 761  KHNNVSGARTLFEKFTKDLGVQPKLPTYNLLIGGLLEADMIEIAQDVFLQVKSTGCIPDV 820

Query: 258  ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
             TY  L++   K   I    E+  +M+   C  + +T+N +++   K G  DDA+ +  +
Sbjct: 821  ATYNFLLDAYGKSGKIDELFELYKEMSTHECEANTITHNIVISGLVKAGNVDDALDLYYD 880

Query: 318  LLS-RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            L+S R   P + TY  L+  L   G      ++ + M +    P    YNILING  K G
Sbjct: 881  LMSDRDFSPTACTYGPLIDGLSKSGRLYEAKQLFEGMLDYGCRPNCAIYNILINGFGKAG 940

Query: 377  LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
              D A   F +MV +  +PD+ TY+ ++  LC  G ++E L     L  S  +P ++ YN
Sbjct: 941  EADAACALFKRMVKEGVRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDVVCYN 1000

Query: 437  TLIDGLAKKGCMEKAMVLYGQM-MENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGK 495
             +I+GL K   +E+A+VL+ +M    GI+PD  T+ +LI     A  VEEA  +  EI +
Sbjct: 1001 LIINGLGKSHRLEEALVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQR 1060

Query: 496  RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTI 543
             G +     +  +I G   S K + A  V + M++  + P+   +  +
Sbjct: 1061 AGLEPNVFTFNALIRGYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108



 Score =  103 bits (258), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 69/259 (26%), Positives = 123/259 (47%), Gaps = 2/259 (0%)

Query: 114  ENDEKTNNKILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            E +  T+N ++      G + DA  L  D+M+ R+  P       LI GL +  R+ +A 
Sbjct: 852  EANTITHNIVISGLVKAGNVDDALDLYYDLMSDRDFSPTACTYGPLIDGLSKSGRLYEAK 911

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++ + M+  G  P+   YN+++ G  K G+  +A AL   M   G  PD+ TY+ ++  +
Sbjct: 912  QLFEGMLDYGCRPNCAIYNILINGFGKAGEADAACALFKRMVKEGVRPDLKTYSVLVDCL 971

Query: 233  FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-EGCSPD 291
               G+  + + ++K+    G  P ++ Y ++I  + K   +  A+ + ++M    G +PD
Sbjct: 972  CMVGRVDEGLHYFKELKESGLNPDVVCYNLIINGLGKSHRLEEALVLFNEMKTSRGITPD 1031

Query: 292  IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            + TYNSL+      G  ++A  + N +   G+EPN  T+N L+      G  +    +  
Sbjct: 1032 LYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIRGYSLSGKPEHAYAVYQ 1091

Query: 352  IMNEASHSPTVFTYNILIN 370
             M     SP   TY  L N
Sbjct: 1092 TMVTGGFSPNTGTYEQLPN 1110



 Score = 59.3 bits (142), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 44/153 (28%), Positives = 72/153 (47%), Gaps = 3/153 (1%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI-RGLIRIDRIEKA 171
            V  D KT + ++   C  G++ +       +      PD   C NLI  GL +  R+E+A
Sbjct: 957  VRPDLKTYSVLVDCLCMVGRVDEGLHYFKELKESGLNPDV-VCYNLIINGLGKSHRLEEA 1015

Query: 172  SKVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
              +   M  S G+ PD  TYN ++  L   G +  A  + +E+  +G EP+V T+N ++R
Sbjct: 1016 LVLFNEMKTSRGITPDLYTYNSLILNLGIAGMVEEAGKIYNEIQRAGLEPNVFTFNALIR 1075

Query: 231  TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
                +GK + A   ++  +  G  P   TY  L
Sbjct: 1076 GYSLSGKPEHAYAVYQTMVTGGFSPNTGTYEQL 1108


>gi|229914885|gb|ACQ90610.1| putative PPR repeat protein [Eutrema halophilum]
          Length = 1023

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 122/472 (25%), Positives = 203/472 (43%), Gaps = 36/472 (7%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
             +A +    M R    P    C  L+    R+ + +   +  + M+ +G  P   TYN+
Sbjct: 79  FEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNI 138

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           M+  +CK G I +A  L +EM   G  PD +TYN+++      G+    + F+++     
Sbjct: 139 MIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMS 198

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
           C P +ITY  LI   CK   + + +E   +M   G  P++V+Y++LV+  CK+     A+
Sbjct: 199 CEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQAL 258

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
               ++   G+ PN  TY +L+ +    G      ++ D M++      V TY  LI+GL
Sbjct: 259 KFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGL 318

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           C    +  A   F +MV+    P++ +Y  ++    K   ++ AL+LL  + G    P L
Sbjct: 319 CDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDL 378

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL------------------- 473
           + Y T I  L     +E A V+  +M E GI  +   + TL                   
Sbjct: 379 LLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEE 438

Query: 474 ----------------IWGFCRADQVEEAVDLLKEIGKRGNKMRNSA-YRLVIHGLCKSK 516
                           I G C+   V +A+D    I        N+A Y  +I GLCK  
Sbjct: 439 MLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKED 498

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +V+ A  + E M      PD T +++++      G   +A  L  K+ E  V
Sbjct: 499 QVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550



 Score =  167 bits (422), Expect = 2e-38,   Method: Compositional matrix adjust.
 Identities = 112/411 (27%), Positives = 194/411 (47%), Gaps = 1/411 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G +  AS L + M  R  IPD     ++I G  ++ R++      + M
Sbjct: 135 TYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEM 194

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 PD ITYN ++   CK G++   +    EM  SG +P+V++Y+T++         
Sbjct: 195 KSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMM 254

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           +QA+ F+ D  R G  P   TYT L++  CK   ++ A  + D+M+  G   ++VTY +L
Sbjct: 255 QQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTAL 314

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++  C   +  +A  +   +++ G+ PN  +Y  L+H        D   ++LD M     
Sbjct: 315 IDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGI 374

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P +  Y   I  LC    ++ A    N+M  K  + +   Y T++ A  K    +E L 
Sbjct: 375 KPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLH 434

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN-GISPDDITHRTLIWGF 477
           LL  +         +T+  LIDGL K   + KA+  +G++  + G+  +   +  +I G 
Sbjct: 435 LLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGL 494

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
           C+ DQVE A  L +++ ++G     +AY  +I G  K   V  A+ + + M
Sbjct: 495 CKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKM 545



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 179/398 (44%), Gaps = 2/398 (0%)

Query: 121 NKILQNFC-SRGKLTDASKLIDIMARRNQ-IPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           N+IL+    S+ +L D      + + RN  +P F     L   LI  D  E+A +    M
Sbjct: 30  NRILREMVLSKAELKDCDVFDVLWSTRNVCVPGFGVFDALFSVLIEEDMFEEALQCFSKM 89

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                 P T + N ++    + G+         +M  +G +P V TYN ++  M   G  
Sbjct: 90  KRCRVFPKTRSCNGLLHKFARLGKTDGMKRFFKDMIGAGSKPTVFTYNIMIDCMCKEGDI 149

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           + A G +++   +G  P  +TY  +I+   K   +   +   ++M    C PD++TYN+L
Sbjct: 150 EAASGLFEEMKFRGLIPDTVTYNSMIDGYGKVGRLDDTVYFFEEMKSMSCEPDVITYNTL 209

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK GK    +     +   G++PN ++Y+TL+ +           K    M     
Sbjct: 210 INCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALKFYVDMRRLGL 269

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  L++  CK G +  A    ++M     + ++VTY  ++  LC    + EA +
Sbjct: 270 VPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLCDVERIKEAEE 329

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +  +   P L +Y  LI G  K   M++A+ L  +M   GI PD + + T IW  C
Sbjct: 330 LFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLLLYGTFIWSLC 389

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
             +++E A  ++ E+ ++G K     Y  ++    KS+
Sbjct: 390 GLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSE 427



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 104/351 (29%), Positives = 167/351 (47%), Gaps = 1/351 (0%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           E D  T N ++  FC  GKL    +    M +    P+      L+    + D +++A K
Sbjct: 200 EPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNVVSYSTLVDAFCKEDMMQQALK 259

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
               M   G VP+  TY  +V   CK G +  A  L DEMS  G E +V+TY  ++  + 
Sbjct: 260 FYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADEMSQVGVEWNVVTYTALIDGLC 319

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           D  + K+A   +   +  G  P L +YT LI    K   + RA+E+LD+M   G  PD++
Sbjct: 320 DVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRALELLDEMKGRGIKPDLL 379

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y + +   C   K + A +V+N +  +G++ N+  Y TL+ +            +L+ M
Sbjct: 380 LYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAYFKSENPSEGLHLLEEM 439

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTYNTVLGALCKEGM 412
            E     T  T+ +LI+GLCK  LV +AI+ F ++ +    Q +   Y  ++  LCKE  
Sbjct: 440 LELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQANAAIYTAMIDGLCKEDQ 499

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +  A  L   +      P    Y +LIDG  K+G + +A+ L  +M E G+
Sbjct: 500 VEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRDKMAEIGV 550



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 71/281 (25%), Positives = 142/281 (50%)

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
           C P    +++L +   ++  +++A+   + +    + P + + N LLH     G  D + 
Sbjct: 59  CVPGFGVFDALFSVLIEEDMFEEALQCFSKMKRCRVFPKTRSCNGLLHKFARLGKTDGMK 118

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           +    M  A   PTVFTYNI+I+ +CK G ++ A   F +M  +   PD VTYN+++   
Sbjct: 119 RFFKDMIGAGSKPTVFTYNIMIDCMCKEGDIEAASGLFEEMKFRGLIPDTVTYNSMIDGY 178

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
            K G L++ +     +   SC P +ITYNTLI+   K G + K +  + +M ++G+ P+ 
Sbjct: 179 GKVGRLDDTVYFFEEMKSMSCEPDVITYNTLINCFCKFGKLPKGLEFFREMKQSGLKPNV 238

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           +++ TL+  FC+ D +++A+    ++ + G       Y  ++   CK   +  A ++ + 
Sbjct: 239 VSYSTLVDAFCKEDMMQQALKFYVDMRRLGLVPNEHTYTSLVDAYCKIGNLSDAFRLADE 298

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           M     + +   ++ ++  + D    +EA +L+ K++   V
Sbjct: 299 MSQVGVEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGV 339



 Score = 66.2 bits (160), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 53/251 (21%), Positives = 100/251 (39%), Gaps = 36/251 (14%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE +  T   ++   C   ++ +A +L   M     IP+      LI G ++   +++A 
Sbjct: 304 VEWNVVTYTALIDGLCDVERIKEAEELFGKMVTAGVIPNLASYTALIHGFVKAKNMDRAL 363

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++L  M   G  PD + Y   +  LC   +I +A  +++EM   G + +   Y T++   
Sbjct: 364 ELLDEMKGRGIKPDLLLYGTFIWSLCGLEKIEAAKVVMNEMQEKGIKANTFIYTTLMDAY 423

Query: 233 FDNGKFKQAI-----------------------GFWKDQLRKGCPPYL------------ 257
           F +    + +                       G  K++L      Y             
Sbjct: 424 FKSENPSEGLHLLEEMLELDIEVTAVTFCVLIDGLCKNKLVSKAIDYFGRISNDFGLQAN 483

Query: 258 -ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
              YT +I+ +CK+  +  A  + + MA +G  PD   Y SL++   KQG    A+ + +
Sbjct: 484 AAIYTAMIDGLCKEDQVEAATTLFEQMAQKGLVPDRTAYTSLIDGKLKQGNVVQALALRD 543

Query: 317 NLLSRGMEPNS 327
            +   G+E  +
Sbjct: 544 KMAEIGVESGA 554


>gi|334186712|ref|NP_001190774.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
 gi|223635614|sp|P0C8Q3.1|PP326_ARATH RecName: Full=Pentatricopeptide repeat-containing protein At4g19890
 gi|332658842|gb|AEE84242.1| Pentatricopeptide repeat domain-containing protein [Arabidopsis
           thaliana]
          Length = 701

 Score =  189 bits (479), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 125/444 (28%), Positives = 212/444 (47%), Gaps = 1/444 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L+NF   G+L +A  ++  M  +   P       ++   + +  IE A  V   M + G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD+ +Y +MV G  + G+I+ A   L  M   G  PD  T   IL  + +NG   +AI
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNATCTLILTALCENGLVNRAI 272

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            +++  +  G  P LI +T LI+ +CK+  I +A E+L++M   G  P++ T+ +L++  
Sbjct: 273 WYFRKMIDLGFKPNLINFTSLIDGLCKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGL 332

Query: 303 CKQGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
           CK+G  + A  L +  + S   +PN  TY +++         +  + +   M E    P 
Sbjct: 333 CKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPN 392

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TY  LING CK G   RA    N M  +   P+I TYN  + +LCK+    EA +LL+
Sbjct: 393 VNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLN 452

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
                      +TY  LI    K+  + +A+  + +M + G   D   +  LI  FCR  
Sbjct: 453 KAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNILIAAFCRQK 512

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +++E+  L + +   G       Y  +I   CK   +D+A++    M      PD   + 
Sbjct: 513 KMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHGCVPDSFTYG 572

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
           +++  +    M +EA KL++ +I+
Sbjct: 573 SLISGLCKKSMVDEACKLYEAMID 596



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/441 (28%), Positives = 210/441 (47%), Gaps = 12/441 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDA----SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           D  T   IL   C  G +  A     K+ID+  + N I +F    +LI GL +   I++A
Sbjct: 251 DNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLI-NF---TSLIDGLCKKGSIKQA 306

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC-EPDVITYNTILR 230
            ++L+ MV +G  P+  T+  ++ GLCKRG    A  L  ++  S   +P+V TY +++ 
Sbjct: 307 FEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIG 366

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                 K  +A   +     +G  P + TYT LI   CK     RA E+++ M  EG  P
Sbjct: 367 GYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMP 426

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           +I TYN+ ++  CK+ +  +A  ++N   S G+E + +TY  L+     +   +      
Sbjct: 427 NIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFF 486

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             MN+      +   NILI   C+   +  +   F  +VS    P   TY +++   CKE
Sbjct: 487 CRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKE 546

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G ++ AL+  H +    C P   TY +LI GL KK  +++A  LY  M++ G+SP ++T 
Sbjct: 547 GDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTR 606

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            TL + +C+ +    A+ LL+ + K   K+     R ++  LC  KKV +A    + ++ 
Sbjct: 607 VTLAYEYCKRNDSANAMILLEPLDK---KLWIRTVRTLVRKLCSEKKVGVAALFFQKLLE 663

Query: 531 SRYKPDDTVFSTIVKKVADDG 551
                D    +      ++ G
Sbjct: 664 KDSSADRVTLAAFTTACSESG 684



 Score =  173 bits (438), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 108/427 (25%), Positives = 207/427 (48%), Gaps = 1/427 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L+     G +  A  + D M+ R  +PD      ++ G  R  +I++A + L  M
Sbjct: 184 TMNCVLEIAVELGLIEYAENVFDEMSVRGVVPDSSSYKLMVIGCFRDGKIQEADRWLTGM 243

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G +PD  T  +++  LC+ G +  AI    +M   G +P++I + +++  +   G  
Sbjct: 244 IQRGFIPDNATCTLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGLCKKGSI 303

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV-LDDMAIEGCSPDIVTYNS 297
           KQA    ++ +R G  P + T+T LI+ +CK+    +A  + L  +  +   P++ TY S
Sbjct: 304 KQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTS 363

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++   CK+ K + A ++ + +  +G+ PN  TY TL++     G +    +++++M +  
Sbjct: 364 MIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEG 423

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P ++TYN  I+ LCK      A    N+  S   + D VTY  ++   CK+  +N+AL
Sbjct: 424 FMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQAL 483

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
                +N +     +   N LI    ++  M+++  L+  ++  G+ P   T+ ++I  +
Sbjct: 484 AFFCRMNKTGFEADMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCY 543

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C+   ++ A+     + + G    +  Y  +I GLCK   VD A ++ E MI     P +
Sbjct: 544 CKEGDIDLALKYFHNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPE 603

Query: 538 TVFSTIV 544
               T+ 
Sbjct: 604 VTRVTLA 610



 Score =  130 bits (327), Expect = 2e-27,   Method: Compositional matrix adjust.
 Identities = 97/382 (25%), Positives = 161/382 (42%), Gaps = 12/382 (3%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQI-PDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T+  ++   C RG    A +L   + R +   P+ H   ++I G  + D++ +A  +   
Sbjct: 324 THTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPNVHTYTSMIGGYCKEDKLNRAEMLFSR 383

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G  P+  TY  ++ G CK G    A  L++ M   G  P++ TYN  + ++    +
Sbjct: 384 MKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMNLMGDEGFMPNIYTYNAAIDSLCKKSR 443

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A          G     +TYTILI++ CKQ  I +A+     M   G   D+   N 
Sbjct: 444 APEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEADMRLNNI 503

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   C+Q K  ++  +   ++S G+ P   TY +++      G  D   K    M    
Sbjct: 504 LIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYFHNMKRHG 563

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P  FTY  LI+GLCK  +VD A   +  M+ +   P  VT  T+    CK      A+
Sbjct: 564 CVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKRNDSANAM 623

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEK----AMVLYGQMMENGISPDDITHRTL 473
            LL  L+          +   +  L +K C EK    A + + +++E   S D +T    
Sbjct: 624 ILLEPLDKK-------LWIRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTLAAF 676

Query: 474 IWGFCRADQVEEAVDLLKEIGK 495
                 + +     DL + I +
Sbjct: 677 TTACSESGKNNLVTDLTERISR 698



 Score =  128 bits (321), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 84/348 (24%), Positives = 161/348 (46%), Gaps = 36/348 (10%)

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           +LR   + G+  +A+G   D   +G  P  IT   ++E   +   I  A  V D+M++ G
Sbjct: 153 MLRNFSEIGRLNEAVGMVMDMQNQGLTPSSITMNCVLEIAVELGLIEYAENVFDEMSVRG 212

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             PD  +Y  +V    + GK  +A   +  ++ RG  P++ T            C     
Sbjct: 213 VVPDSSSYKLMVIGCFRDGKIQEADRWLTGMIQRGFIPDNAT------------C----- 255

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
                              +++  LC+ GLV+RAI  F +M+    +P+++ + +++  L
Sbjct: 256 ------------------TLILTALCENGLVNRAIWYFRKMIDLGFKPNLINFTSLIDGL 297

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME-NGISPD 466
           CK+G + +A ++L  +  +   P + T+  LIDGL K+G  EKA  L+ +++  +   P+
Sbjct: 298 CKKGSIKQAFEMLEEMVRNGWKPNVYTHTALIDGLCKRGWTEKAFRLFLKLVRSDTYKPN 357

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
             T+ ++I G+C+ D++  A  L   + ++G     + Y  +I+G CK+     A +++ 
Sbjct: 358 VHTYTSMIGGYCKEDKLNRAEMLFSRMKEQGLFPNVNTYTTLINGHCKAGSFGRAYELMN 417

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           LM    + P+   ++  +  +       EAY+L  K     +   G T
Sbjct: 418 LMGDEGFMPNIYTYNAAIDSLCKKSRAPEAYELLNKAFSCGLEADGVT 465



 Score = 70.1 bits (170), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 57/251 (22%), Positives = 101/251 (40%), Gaps = 7/251 (2%)

Query: 95  TITKKSHDPS----LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIP 150
           ++ KKS  P     L  +    +E D  T   ++Q  C +  +  A      M +     
Sbjct: 437 SLCKKSRAPEAYELLNKAFSCGLEADGVTYTILIQEQCKQNDINQALAFFCRMNKTGFEA 496

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALL 210
           D      LI    R  +++++ ++ Q++V  G +P   TY  M+   CK G I  A+   
Sbjct: 497 DMRLNNILIAAFCRQKKMKESERLFQLVVSLGLIPTKETYTSMISCYCKEGDIDLALKYF 556

Query: 211 DEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQ 270
             M   GC PD  TY +++  +       +A   ++  + +G  P  +T   L  + CK+
Sbjct: 557 HNMKRHGCVPDSFTYGSLISGLCKKSMVDEACKLYEAMIDRGLSPPEVTRVTLAYEYCKR 616

Query: 271 CGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITY 330
              A A+ +L+ +  +     I T  +LV   C + K   A L    LL +    + +T 
Sbjct: 617 NDSANAMILLEPLDKKLW---IRTVRTLVRKLCSEKKVGVAALFFQKLLEKDSSADRVTL 673

Query: 331 NTLLHSLGSRG 341
                +    G
Sbjct: 674 AAFTTACSESG 684


>gi|15222150|ref|NP_172763.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
 gi|75200670|sp|Q9SAD9.1|PPR40_ARATH RecName: Full=Pentatricopeptide repeat-containing protein
           At1g13040, mitochondrial; Flags: Precursor
 gi|4850387|gb|AAD31057.1|AC007357_6 F3F19.6 [Arabidopsis thaliana]
 gi|332190841|gb|AEE28962.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
          Length = 517

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 177/350 (50%), Gaps = 3/350 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP-DTIT 189
           GK+TDA ++ + M R    PD   C  L+ GL    +++ A +++   + S  V   T+ 
Sbjct: 163 GKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVV 222

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           YN ++ G CK G+I  A AL   MS  GCEPD++TYN +L   +DN   K+A G   + +
Sbjct: 223 YNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMV 282

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVL-DDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           R G      +Y  L+++ C+     +    +  +M   G   D+V+Y++L+   C+    
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFC-DVVSYSTLIETFCRASNT 341

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             A  +   +  +GM  N +TY +L+ +    G      K+LD M E   SP    Y  +
Sbjct: 342 RKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           ++ LCK G VD+A   FN M+     PD ++YN+++  LC+ G + EA++L   + G  C
Sbjct: 402 LDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            P  +T+  +I GL +   +  A  ++ QMM+ G + D     TLI   C
Sbjct: 462 CPDELTFKFIIGGLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 104/419 (24%), Positives = 192/419 (45%), Gaps = 6/419 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
            I GL ++ + +    +L  M   G +PD   +N+ +  LC+  ++  A+     M   G
Sbjct: 85  FISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENKVGFAVQTFFCMVQRG 144

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            EPDV++Y  ++  +F  GK   A+  W   +R G  P       L+  +C    +  A 
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204

Query: 278 E-VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           E V +++         V YN+L++  CK G+ + A  + + +   G EP+ +TYN LL+ 
Sbjct: 205 EMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSKIGCEPDLVTYNVLLNY 264

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
                     + ++  M  +      ++YN L+   C+    D+  N   + +      D
Sbjct: 265 YYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDKCYNFMVKEMEPRGFCD 324

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +V+Y+T++   C+     +A +L   +        ++TY +LI    ++G    A  L  
Sbjct: 325 VVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIKAFLREGNSSVAKKLLD 384

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           QM E G+SPD I + T++   C++  V++A  +  ++ +        +Y  +I GLC+S 
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEITPDAISYNSLISGLCRSG 444

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +V  AI++ E M      PD+  F  I+  +        AYK+W +++     +KG TL
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIRGKKLSAAYKVWDQMM-----DKGFTL 498



 Score =  135 bits (340), Expect = 6e-29,   Method: Compositional matrix adjust.
 Identities = 97/398 (24%), Positives = 173/398 (43%), Gaps = 9/398 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  L   C   K+  A +    M +R + PD      LI GL R  ++  A ++   M+ 
Sbjct: 118 NVYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIR 177

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALL-DEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           SG  PD      +V GLC   ++  A  ++ +E+  +  +   + YN ++      G+ +
Sbjct: 178 SGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIE 237

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A        + GC P L+TY +L+        + RA  V+ +M   G   D  +YN L+
Sbjct: 238 KAEALKSYMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLL 297

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEP----NSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
              C+    D       N + + MEP    + ++Y+TL+ +           ++ + M +
Sbjct: 298 KRHCRVSHPDKCY----NFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQ 353

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 V TY  LI    + G    A    +QM      PD + Y T+L  LCK G +++
Sbjct: 354 KGMVMNVVTYTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  + + +     +P  I+YN+LI GL + G + +A+ L+  M      PD++T + +I 
Sbjct: 414 AYGVFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIG 473

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           G  R  ++  A  +  ++  +G  +       +I   C
Sbjct: 474 GLIRGKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511



 Score =  133 bits (335), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 103/418 (24%), Positives = 176/418 (42%), Gaps = 38/418 (9%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           + Y   +  L K G I +A+ + DEM  S        YN  +  +    +F+ A   + D
Sbjct: 10  LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSFDYNRFIGVLVRESRFELAEAIYWD 69

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
               G      TY+  I  +CK         +L DM   G  PDI  +N  ++  C++ K
Sbjct: 70  MKPMGFSLIPFTYSRFISGLCKVKKFDLIDALLSDMETLGFIPDIWAFNVYLDLLCRENK 129

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYN 366
              AV     ++ RG EP+ ++Y  L++ L   G   DAV+ I + M  +  SP      
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVE-IWNAMIRSGVSPDNKACA 188

Query: 367 ILINGLCKYGLVDRAINSFNQMV-SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
            L+ GLC    VD A     + + S   +   V YN ++   CK G + +A  L   ++ 
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSTVVYNALISGFCKAGRIEKAEALKSYMSK 248

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS------------------PDD 467
             C P L+TYN L++       +++A  +  +M+ +GI                   PD 
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMAEMVRSGIQLDAYSYNQLLKRHCRVSHPDK 308

Query: 468 -----------------ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
                            +++ TLI  FCRA    +A  L +E+ ++G  M    Y  +I 
Sbjct: 309 CYNFMVKEMEPRGFCDVVSYSTLIETFCRASNTRKAYRLFEEMRQKGMVMNVVTYTSLIK 368

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              +     +A ++L+ M      PD   ++TI+  +   G  ++AY ++  +IE ++
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGVFNDMIEHEI 426


>gi|359481393|ref|XP_002276762.2| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Vitis vinifera]
          Length = 625

 Score =  188 bits (478), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 110/387 (28%), Positives = 195/387 (50%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           ++ GL +   +E   K++  +   G   + +TYN  + G  KR  +     +L  M   G
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              +V+TY  ++    + GK ++A   +++   KG    +  YT +I   C+   + RA+
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + D+M  +G  P   TY +L++  CK G+ + A +++N +  +G++ N + +NTL+   
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  D   ++  +M +      VF YN + +GLCK    D A      MV +   P+ 
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 470

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           +++ T++   CKEG   EA ++   +      P +ITYN LIDG +K+G M++A  L  +
Sbjct: 471 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 530

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           +   G+ PD  T  +LI G C   +V+ A+ L  E+ +RG       Y  +I GL K  +
Sbjct: 531 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 590

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIV 544
            + A ++ + M  +   PDDTV+S++V
Sbjct: 591 SEEAFKLYDEMKETGLTPDDTVYSSLV 617



 Score =  155 bits (393), Expect = 5e-35,   Method: Compositional matrix adjust.
 Identities = 104/390 (26%), Positives = 183/390 (46%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L   C RG +    KL+D +A +    +       I G  +   +   +++L +M   G
Sbjct: 231 VLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRLDLGGVAEILTLMEKEG 290

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              + +TY +++ G    G+I  A  L +EM   G E DV  Y +I+     +G  K+A+
Sbjct: 291 VACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVYVYTSIISCNCRSGNVKRAL 350

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             + +   KG  P   TY  LI  VCK   +  A  ++++M  +G   + V +N+L++  
Sbjct: 351 VLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGY 410

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G  D+A+ +   +  +G+E +   YN++   L      D    +L  M E   SP  
Sbjct: 411 CESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNT 470

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            ++  LI+  CK G    A   F +M  K   P+I+TYN ++    K G + EA +L   
Sbjct: 471 MSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDE 530

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           L      P + T  +LI G    G ++ A+ L+ +M + G+ P+ +T+  +I G  +  +
Sbjct: 531 LENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGR 590

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            EEA  L  E+ + G    ++ Y  ++  L
Sbjct: 591 SEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  149 bits (376), Expect = 4e-33,   Method: Compositional matrix adjust.
 Identities = 111/487 (22%), Positives = 216/487 (44%), Gaps = 76/487 (15%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           EK  + + + +       +A +  + M ++    D   C+  +  L R  +++   +  +
Sbjct: 155 EKFFDLLFRVYADNKMFGEALEAFEHMEKKGFHIDERSCLVYLLALRRGGQVDSCLRFFR 214

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF--- 233
            MV         +  +++ GLCKRG +     L+DE++  G + +V+TYN  +   F   
Sbjct: 215 RMVNLDVEVTVYSLTIVLDGLCKRGDVEMGRKLMDEVAAKGVKANVVTYNAFIEGYFKRL 274

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           D G   + +   +   ++G    ++TYT+LI        I  A  + ++M  +G   D+ 
Sbjct: 275 DLGGVAEILTLME---KEGVACNVVTYTLLIHGFSNIGKIEEAQRLFEEMREKGIEADVY 331

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
            Y S+++ +C+ G    A+++ + +  +G+                              
Sbjct: 332 VYTSIISCNCRSGNVKRALVLFDEMTDKGL------------------------------ 361

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                 P+  TY  LI+G+CK G ++ A    N+M  K    + V +NT++   C+ GM+
Sbjct: 362 -----IPSAHTYGALIHGVCKAGQMEAAQMLVNEMQGKGIDLNPVIFNTLIDGYCESGMV 416

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           +EAL+L  ++        +  YN++  GL K    ++A  L   M+E G+SP+ ++  TL
Sbjct: 417 DEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVERGVSPNTMSFTTL 476

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGN---------------KMRN--SAYRL--------- 507
           I  +C+     EA  + +E+ ++GN               K  N   A++L         
Sbjct: 477 IDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKEAHKLKDELENRGL 536

Query: 508 ---------VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
                    +IHG C   KVDMA+++ + M      P+   ++ ++  ++ DG +EEA+K
Sbjct: 537 IPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMISGLSKDGRSEEAFK 596

Query: 559 LWQKLIE 565
           L+ ++ E
Sbjct: 597 LYDEMKE 603



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 83/295 (28%), Positives = 140/295 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D      I+   C  G +  A  L D M  +  IP  H    LI G+ +  ++E A 
Sbjct: 326 IEADVYVYTSIISCNCRSGNVKRALVLFDEMTDKGLIPSAHTYGALIHGVCKAGQMEAAQ 385

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M   G   + + +N ++ G C+ G +  A+ L   M   G E DV  YN+I   +
Sbjct: 386 MLVNEMQGKGIDLNPVIFNTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGL 445

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +  +A G     + +G  P  +++T LI+  CK+     A  V  +M  +G  P+I
Sbjct: 446 CKLNRKDEAKGLLFSMVERGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNI 505

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TYN L++   K+G   +A  + + L +RG+ P+  T  +L+H     G  D   K+ D 
Sbjct: 506 ITYNVLIDGYSKRGNMKEAHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDE 565

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           M +    P V TY  +I+GL K G  + A   +++M      PD   Y++++G+L
Sbjct: 566 MPQRGLVPNVVTYTAMISGLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSL 620



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 57/219 (26%), Positives = 111/219 (50%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  +C  G + +A +L  +M ++    D     ++  GL +++R ++A  +L  MV 
Sbjct: 404 NTLIDGYCESGMVDEALRLQVVMEKKGLESDVFAYNSIASGLCKLNRKDEAKGLLFSMVE 463

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+T+++  ++   CK G    A  +  EM   G  P++ITYN ++      G  K+
Sbjct: 464 RGVSPNTMSFTTLIDIYCKEGNFVEAKRVFREMEEKGNVPNIITYNVLIDGYSKRGNMKE 523

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     +   +G  P + T T LI   C    +  A+++ D+M   G  P++VTY ++++
Sbjct: 524 AHKLKDELENRGLIPDVYTCTSLIHGECIDGKVDMALKLFDEMPQRGLVPNVVTYTAMIS 583

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGS 339
              K G+ ++A  + + +   G+ P+   Y++L+ SL S
Sbjct: 584 GLSKDGRSEEAFKLYDEMKETGLTPDDTVYSSLVGSLHS 622


>gi|297849764|ref|XP_002892763.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
 gi|297338605|gb|EFH69022.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
          Length = 804

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 143/532 (26%), Positives = 244/532 (45%), Gaps = 67/532 (12%)

Query: 84  VLAVNKKLR----GLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKL 139
           +L ++ +LR     L I KK  D +L  S   +        N +L NF    K+ D  K 
Sbjct: 149 LLFLSSRLRMVDESLYILKKMKDRNLNVSTQSY--------NSVLYNFRETDKMWDVYKE 200

Query: 140 IDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK 199
           I     +N+    H    ++ GL R  ++E A   L+        P  +++N ++   CK
Sbjct: 201 I---KDKNE----HTYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCK 253

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
            G +  A +    +   G  P V ++N ++  +   G   +A+    D  + G  P  +T
Sbjct: 254 LGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVT 313

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           Y IL++       I+ A EV+ DM  +G SPD++TY  L+   C+ G  D  ++++ ++L
Sbjct: 314 YNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDML 373

Query: 320 SRGMEPNSIT-YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
           SRG E  SI  Y+ +L  L   G  D    +   +     +P +  Y+I+I+GLCK G  
Sbjct: 374 SRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKF 433

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
           D A+  +++M  K   P+  T   ++  LC++GML EA  LL  L  S  +  +I YN +
Sbjct: 434 DMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIV 493

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLL-------- 490
           IDG AK GC+E+A+ L+   +E+GI+P+  T  +LI+G+C+   + EA  +L        
Sbjct: 494 IDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGL 553

Query: 491 ---------------------------KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
                                      +E+   G    N  Y ++  GLC+  K++   Q
Sbjct: 554 VPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQ 613

Query: 524 VLELMISSRYK------------PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           VL   I  ++             PD   ++TI++ +        A++L++K+
Sbjct: 614 VLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKM 665



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 119/474 (25%), Positives = 222/474 (46%), Gaps = 17/474 (3%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N I+ ++C  G +  A      + +   +P  +    LI GL  +  I +A ++   M  
Sbjct: 245 NSIMSSYCKLGFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNK 304

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  PD++TYN++V G    G I  A  ++ +M   G  PDVITY  +L      G    
Sbjct: 305 HGVEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDM 364

Query: 241 AIGFWKDQLRKGCP-PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            +   KD L +G     +I Y++++  +CK   +  A+ +  D+   G +PD+V Y+ ++
Sbjct: 365 GLILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVI 424

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK GK+D AV V + +  + + PNS T   ++  L  +G       +LD +  +  +
Sbjct: 425 HGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDT 484

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             +  YNI+I+G  K G ++ A+  F   +     P++ T+N+++   CK   + EA ++
Sbjct: 485 LDIILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKI 544

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L ++      P +++Y TL+D  A  G ++    L  +M   GI P ++T+  +  G CR
Sbjct: 545 LDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCR 604

Query: 480 ADQVEEAVDLLKE--IGKRGNKMRNS----------AYRLVIHGLCKSKKVDMAIQVLEL 527
             ++E    +L+E  + K  + +R+            Y  +I  LC+ K +  A ++ + 
Sbjct: 605 GWKLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKK 664

Query: 528 MISSRYKPDDTVFSTIVKKVADDGMTEEA----YKLWQKLIEWKVFEKGTTLLA 577
           M S    P    ++ ++  +   G   +A    Y L ++ +    F   T + A
Sbjct: 665 MKSQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKA 718



 Score =  159 bits (401), Expect = 6e-36,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 211/481 (43%), Gaps = 48/481 (9%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE D  T N +++ F   G ++ A ++I  M  +   PD      L+ G  ++  I+   
Sbjct: 307 VEPDSVTYNILVKGFHLLGMISGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGL 366

Query: 173 KVLQIMVMSG-GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +L+ M+  G  +   I Y++M+ GLCK G++  A++L  ++   G  PD++ Y+ ++  
Sbjct: 367 ILLKDMLSRGFELKSIIPYSVMLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHG 426

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPY----------------------------------- 256
           +   GKF  A+  + +   K   P                                    
Sbjct: 427 LCKLGKFDMAVRVYDEMCYKRILPNSRTLGAIMLGLCQKGMLLEARSLLDSLISSGDTLD 486

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           +I Y I+I+   K   I  A+E+       G +P++ T+NSL+   CK     +A  +++
Sbjct: 487 IILYNIVIDGYAKSGCIEEALELFKVAIESGITPNVATFNSLIYGYCKTQNIAEARKILD 546

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCK-- 374
            +   G+ P+ ++Y TL+ +  + G   +++++   M      PT  TY+++  GLC+  
Sbjct: 547 VIKLYGLVPSVVSYTTLMDAYANCGSIKSIEELRREMKAEGIPPTNVTYSVIFKGLCRGW 606

Query: 375 ------YGLVDRAINSFNQ----MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
                   L +R +  FN     M S+   PD +TYNT++  LC+   L+ A +L   + 
Sbjct: 607 KLENCNQVLRERILEKFNHVLRDMESEGITPDQITYNTIIQYLCRVKHLSRAFELFKKMK 666

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
             +  P   TYN LID L   GC+ KA      + +  +S     + T+I   C     E
Sbjct: 667 SQNLDPTSATYNILIDSLCIYGCIRKADRFLYSLQKRNVSLSKFAYTTVIKAHCVKGDPE 726

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
            AV L  ++  RG  +    Y  VI+ LC+      +     LM+S    PD  +   ++
Sbjct: 727 MAVILFNQLLDRGFNVSIRDYSAVINRLCRRHLAIESKYFFCLMLSRGISPDLDICEVMI 786

Query: 545 K 545
           K
Sbjct: 787 K 787



 Score =  158 bits (399), Expect = 8e-36,   Method: Compositional matrix adjust.
 Identities = 114/460 (24%), Positives = 211/460 (45%), Gaps = 13/460 (2%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           ++N ++   C  G + +A +L   M +    PD      L++G   +  I  A +V+Q M
Sbjct: 278 SHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMISGAGEVIQDM 337

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE-PDVITYNTILRTMFDNGK 237
           +  G  PD ITY +++ G C+ G I   + LL +M   G E   +I Y+ +L  +   G+
Sbjct: 338 LDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSVMLSGLCKTGR 397

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+  + D    G  P L+ Y+I+I  +CK      A+ V D+M  +   P+  T  +
Sbjct: 398 VDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKRILPNSRTLGA 457

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++   C++G   +A  ++++L+S G   + I YN ++      GC +   ++  +  E+ 
Sbjct: 458 IMLGLCQKGMLLEARSLLDSLISSGDTLDIILYNIVIDGYAKSGCIEEALELFKVAIESG 517

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            +P V T+N LI G CK   +  A    + +      P +V+Y T++ A    G +    
Sbjct: 518 ITPNVATFNSLIYGYCKTQNIAEARKILDVIKLYGLVPSVVSYTTLMDAYANCGSIKSIE 577

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAK----KGC--------MEKAMVLYGQMMENGISP 465
           +L   +      P  +TY+ +  GL +    + C        +EK   +   M   GI+P
Sbjct: 578 ELRREMKAEGIPPTNVTYSVIFKGLCRGWKLENCNQVLRERILEKFNHVLRDMESEGITP 637

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           D IT+ T+I   CR   +  A +L K++  +     ++ Y ++I  LC    +  A + L
Sbjct: 638 DQITYNTIIQYLCRVKHLSRAFELFKKMKSQNLDPTSATYNILIDSLCIYGCIRKADRFL 697

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
             +           ++T++K     G  E A  L+ +L++
Sbjct: 698 YSLQKRNVSLSKFAYTTVIKAHCVKGDPEMAVILFNQLLD 737



 Score =  134 bits (336), Expect = 2e-28,   Method: Compositional matrix adjust.
 Identities = 81/272 (29%), Positives = 139/272 (51%), Gaps = 1/272 (0%)

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY+++V+  C+Q K +DAVL +     + + P+ +++N+++ S    G  D        +
Sbjct: 208 TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKLGFVDMAKSFFCTV 267

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +    P+V+++NILINGLC  G +  A+   + M     +PD VTYN ++      GM+
Sbjct: 268 LKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTYNILVKGFHLLGMI 327

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT-HRT 472
           + A +++  +     SP +ITY  L+ G  + G ++  ++L   M+  G     I  +  
Sbjct: 328 SGAGEVIQDMLDKGLSPDVITYTILLCGQCQLGNIDMGLILLKDMLSRGFELKSIIPYSV 387

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           ++ G C+  +V+EA+ L  ++   G      AY +VIHGLCK  K DMA++V + M   R
Sbjct: 388 MLSGLCKTGRVDEALSLFYDLEAYGLTPDLVAYSIVIHGLCKLGKFDMAVRVYDEMCYKR 447

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             P+      I+  +   GM  EA  L   LI
Sbjct: 448 ILPNSRTLGAIMLGLCQKGMLLEARSLLDSLI 479



 Score = 47.0 bits (110), Expect = 0.028,   Method: Compositional matrix adjust.
 Identities = 40/205 (19%), Positives = 92/205 (44%), Gaps = 7/205 (3%)

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           T   +++L+    +  +VD ++    +M  +N      +YN+VL    +   + +  + +
Sbjct: 142 TGLVWDMLLFLSSRLRMVDESLYILKKMKDRNLNVSTQSYNSVLYNFRETDKMWDVYKEI 201

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              N         TY+T++DGL ++  +E A++         I P  ++  +++  +C+ 
Sbjct: 202 KDKNEH-------TYSTVVDGLCRQQKLEDAVLFLRTSEWKDIGPSVVSFNSIMSSYCKL 254

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             V+ A      + K G      ++ ++I+GLC    +  A+++   M     +PD   +
Sbjct: 255 GFVDMAKSFFCTVLKCGLVPSVYSHNILINGLCLVGSIAEALELASDMNKHGVEPDSVTY 314

Query: 541 STIVKKVADDGMTEEAYKLWQKLIE 565
           + +VK     GM   A ++ Q +++
Sbjct: 315 NILVKGFHLLGMISGAGEVIQDMLD 339


>gi|255563546|ref|XP_002522775.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223538013|gb|EEF39626.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 1071

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 113/455 (24%), Positives = 218/455 (47%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           P  +++    + +++ +   G + DA +   +M  R   P  + C  L+  L++  ++  
Sbjct: 92  PLCKSNPSVFDLLIRVYLREGMVGDALETFRLMGIRGFNPSVYTCNMLLGKLVKERKVGA 151

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
                + M+     PD  T+N+++  LC  G+++ A  LL +M  SG  P V+TYNT+L 
Sbjct: 152 VWLFFKEMLARRVCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLN 211

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
                G++K A+        KG      TY +L++ +CK    A+   +L  M     SP
Sbjct: 212 WYCKKGRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISP 271

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           + +TYNS++N   K+GK   A  +   +    + PN +TYN L+      G ++    IL
Sbjct: 272 NEITYNSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTIL 331

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           ++M      P   +Y+ L+NGLC++   + + +   +M         + Y  ++  LC+ 
Sbjct: 332 EMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRN 391

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G+LNE+++LL  +      P ++T++ LI+G  + G ++    +  +M + G++P+ I +
Sbjct: 392 GLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIY 451

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
            TLI+ +C+   V EA  +   + + G         +++  LCK  KV +A      M  
Sbjct: 452 TTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSK 511

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
               P+   F  I+    + G   +A+ ++ ++I+
Sbjct: 512 IGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIK 546



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 109/423 (25%), Positives = 204/423 (48%), Gaps = 1/423 (0%)

Query: 141 DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           +++ARR   PD      LI  L    +++KA  +L+ M  SG VP  +TYN ++   CK+
Sbjct: 158 EMLARR-VCPDVSTFNILINVLCVEGKLKKAGYLLKKMEESGYVPSVVTYNTVLNWYCKK 216

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G+ ++A+ L+D+M   G E D  TYN ++  +  N +  +     K   ++   P  ITY
Sbjct: 217 GRYKAALELIDQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITY 276

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
             +I    K+  I  A  +  +M++    P+ VTYN+L++  C  G ++ A+ ++  + +
Sbjct: 277 NSIINGFVKEGKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEA 336

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G +PN ++Y+ LL+ L     ++    IL+ M           Y  +I+GLC+ GL++ 
Sbjct: 337 TGPKPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNE 396

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           ++   ++M+     PD+VT++ ++   C+ G +    +++  +  +  +P  I Y TLI 
Sbjct: 397 SVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIY 456

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
              K G + +A  +Y  M   G   +      L+   C+  +V  A      + K GN  
Sbjct: 457 NYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVP 516

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
            +  +  +I+G   S     A  + + MI + + P    +  ++K +   G  +EA +L 
Sbjct: 517 NSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLL 576

Query: 561 QKL 563
            KL
Sbjct: 577 DKL 579



 Score =  175 bits (443), Expect = 6e-41,   Method: Compositional matrix adjust.
 Identities = 121/453 (26%), Positives = 207/453 (45%), Gaps = 2/453 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G    A  ++++M      P+      L+ GL R  + E +  +L+ M
Sbjct: 310 TYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSYSALLNGLCRHAKFELSKSILERM 369

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
            M+G +   I Y  M+ GLC+ G +  ++ LLD+M   G  PDV+T++ ++      GK 
Sbjct: 370 RMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKI 429

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K          + G  P  I YT LI   CK   +  A +V   M+  G   +    N L
Sbjct: 430 KNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVL 489

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           V+  CK GK   A    +++   G  PNSIT++ +++  G+ G       + D M +A H
Sbjct: 490 VSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGH 549

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P+ FTY  L+  LC+ G    A    +++       D VTYNT+L    K GML +A+ 
Sbjct: 550 HPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVA 609

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENG-ISPDDITHRTLIWGF 477
           L   +   +  P   TY  +  GL ++G M  A+  YG ++  G +SP+ + + T + G 
Sbjct: 610 LFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGL 669

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS-RYKPD 536
            RA Q + A+   +++ K G      A  ++++G  +  K+  A  +  +M S     P 
Sbjct: 670 FRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPS 729

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
              ++ ++   A      +   L+  ++   +F
Sbjct: 730 LATYNILLHGYAKKKNLSKCSNLYNIMMRTGIF 762



 Score =  165 bits (417), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 119/480 (24%), Positives = 219/480 (45%), Gaps = 37/480 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++   C  G L ++ KL+D M +   +PD      LI G  R+ +I+   +++  M  +G
Sbjct: 384 MIDGLCRNGLLNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAG 443

Query: 183 GVPDTITY-----------------------------------NMMVGGLCKRGQIRSAI 207
             P++I Y                                   N++V  LCK G++  A 
Sbjct: 444 LAPNSIIYTTLIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAE 503

Query: 208 ALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQV 267
                MS  G  P+ IT++ I+    ++G   +A   + + ++ G  P   TY  L++ +
Sbjct: 504 YFFHHMSKIGNVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKAL 563

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+      A  +LD +     + D VTYN+++  + K G   DAV + + ++ R + P+S
Sbjct: 564 CRAGKFKEAKRLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDS 623

Query: 328 ITYNTLLHSLGSRGCWDAVDKIL-DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
            TY  +   L  RG   A      +++ + + SP    Y   ++GL + G    A+    
Sbjct: 624 YTYAIIFAGLIRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCE 683

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLL-NGSSCSPCLITYNTLIDGLAKK 445
            M       D++  N +L    + G + +A  +  ++ +G + SP L TYN L+ G AKK
Sbjct: 684 DMEKNGLCADLIATNVILNGYSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKK 743

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             + K   LY  MM  GI PD +T  +LI GFC++  ++  + LLK++   G  +    +
Sbjct: 744 KNLSKCSNLYNIMMRTGIFPDKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTF 803

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++I   C++ +V  A  ++ +M      PD T   +I+  ++     +E++ L  +++E
Sbjct: 804 NMLIMKYCETDEVGKAFDLVNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLE 863



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/484 (24%), Positives = 219/484 (45%), Gaps = 11/484 (2%)

Query: 83  HVLAVNKKLR--GLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLI 140
           +VL V  KL+  G  + K      +PS           T N +L  +C +G+   A +LI
Sbjct: 176 NVLCVEGKLKKAGYLLKKMEESGYVPSV---------VTYNTVLNWYCKKGRYKAALELI 226

Query: 141 DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           D M  +    D      L+  L + +R  K   +L+ M      P+ ITYN ++ G  K 
Sbjct: 227 DQMGSKGIEADACTYNMLVDDLCKNNRSAKGYLLLKKMRKRMISPNEITYNSIINGFVKE 286

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G+I +A  +  EMS+    P+ +TYN ++     +G F+QA+   +     G  P  ++Y
Sbjct: 287 GKIGAATRIFQEMSMLNLLPNCVTYNALIDGHCHDGNFEQALTILEMMEATGPKPNEVSY 346

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           + L+  +C+      +  +L+ M + G     + Y ++++  C+ G  +++V +++ +L 
Sbjct: 347 SALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGLLNESVKLLDKMLK 406

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
            G+ P+ +T++ L++     G    V +I+  M +A  +P    Y  LI   CK G V  
Sbjct: 407 DGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTTLIYNYCKTGDVVE 466

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A   +  M       +    N ++ +LCK+G +  A    H ++     P  IT++ +I+
Sbjct: 467 AFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIGNVPNSITFDCIIN 526

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
           G    G   KA  ++ +M++ G  P   T+  L+   CRA + +EA  LL ++    + +
Sbjct: 527 GYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIPSAV 586

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  ++    KS  +  A+ + + M+     PD   ++ I   +   G    A   +
Sbjct: 587 DTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFY 646

Query: 561 QKLI 564
             L+
Sbjct: 647 GNLL 650



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 104/450 (23%), Positives = 203/450 (45%), Gaps = 6/450 (1%)

Query: 108 SDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR 167
           + GP  + +E + + +L   C   K   +  +++ M     I        +I GL R   
Sbjct: 336 ATGP--KPNEVSYSALLNGLCRHAKFELSKSILERMRMNGMIVGCIAYTAMIDGLCRNGL 393

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           + ++ K+L  M+  G VPD +T+++++ G C+ G+I++   ++ +M  +G  P+ I Y T
Sbjct: 394 LNESVKLLDKMLKDGVVPDVVTFSVLINGFCRVGKIKNVKEIICKMYKAGLAPNSIIYTT 453

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++      G   +A   +    R G         +L+  +CK   +  A      M+  G
Sbjct: 454 LIYNYCKTGDVVEAFKVYVAMSRIGYDANCFICNVLVSSLCKDGKVGVAEYFFHHMSKIG 513

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
             P+ +T++ ++N     G    A  + + ++  G  P+  TY  LL +L   G +    
Sbjct: 514 NVPNSITFDCIINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAK 573

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++LD ++    +    TYN ++    K G++  A+  F++MV +N  PD  TY  +   L
Sbjct: 574 RLLDKLHYIPSAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGL 633

Query: 408 CKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
            + G +  AL    +LL   + SP  + Y T +DGL + G  + A+     M +NG+  D
Sbjct: 634 IRRGKMVAALHFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCAD 693

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS--AYRLVIHGLCKSKKVDMAIQV 524
            I    ++ G+ R  ++ +A D+   +   G  +  S   Y +++HG  K K +     +
Sbjct: 694 LIATNVILNGYSRMGKMAKAGDIFTMMWS-GITISPSLATYNILLHGYAKKKNLSKCSNL 752

Query: 525 LELMISSRYKPDDTVFSTIVKKVADDGMTE 554
             +M+ +   PD     +++       M +
Sbjct: 753 YNIMMRTGIFPDKLTCHSLILGFCKSAMLD 782



 Score =  147 bits (371), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 194/439 (44%), Gaps = 2/439 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+  + + G    A  + D M +    P       L++ L R  + ++A ++L  +    
Sbjct: 524 IINGYGNSGNGLKAFSMFDEMIKAGHHPSHFTYGGLLKALCRAGKFKEAKRLLDKLHYIP 583

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              DT+TYN ++    K G +  A+AL DEM      PD  TY  I   +   GK   A+
Sbjct: 584 SAVDTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAAL 643

Query: 243 GFWKDQLRKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
            F+ + L KG   P  + YT  ++ + +      A+   +DM   G   D++  N ++N 
Sbjct: 644 HFYGNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNG 703

Query: 302 SCKQGKYDDAVLVINNLLSR-GMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             + GK   A  +   + S   + P+  TYN LLH    +        + +IM      P
Sbjct: 704 YSRMGKMAKAGDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFP 763

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
              T + LI G CK  ++D  +    +M+      D  T+N ++   C+   + +A  L+
Sbjct: 764 DKLTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCETDEVGKAFDLV 823

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
           +++N     P + T++++I  L++   ++++ +L  +M+E G  PD   +  L+   CR 
Sbjct: 824 NIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCRM 883

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             +  A  L  E+   G    + A   ++ GL K  KV+ A  VL+ M+     P    F
Sbjct: 884 GHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATF 943

Query: 541 STIVKKVADDGMTEEAYKL 559
           +T++     +    EA KL
Sbjct: 944 TTLMHMFCRNESLVEALKL 962



 Score =  138 bits (347), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 118/438 (26%), Positives = 202/438 (46%), Gaps = 10/438 (2%)

Query: 116  DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
            D  T N IL      G LTDA  L D M +RN +PD +    +  GLIR  ++  A    
Sbjct: 587  DTVTYNTILVETFKSGMLTDAVALFDEMVQRNVLPDSYTYAIIFAGLIRRGKMVAALHFY 646

Query: 176  QIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
              ++  G V P+ + Y   V GL + GQ ++A+   ++M  +G   D+I  N IL     
Sbjct: 647  GNLLGKGAVSPEKVMYTTFVDGLFRAGQSKAALYFCEDMEKNGLCADLIATNVILNGYSR 706

Query: 235  NGKFKQAIGFWKDQLRKGC--PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             GK  +A G     +  G    P L TY IL+    K+  +++   + + M   G  PD 
Sbjct: 707  MGKMAKA-GDIFTMMWSGITISPSLATYNILLHGYAKKKNLSKCSNLYNIMMRTGIFPDK 765

Query: 293  VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD- 351
            +T +SL+   CK    D  + ++  +L  G+  +  T+N L+         D V K  D 
Sbjct: 766  LTCHSLILGFCKSAMLDVGLKLLKKMLLDGVAVDQCTFNMLIMKYCET---DEVGKAFDL 822

Query: 352  --IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
              IMN     P + T++ +I+ L +   V  +    ++M+ + C PD   Y  ++  +C+
Sbjct: 823  VNIMNLFDIFPDMTTHDSIISVLSRVSTVQESHLLLHEMLERGCIPDRRQYIALVNRMCR 882

Query: 410  EGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDIT 469
             G ++ A +L   +     S   +  + L+ GLAK G +E+A ++   M+   + P   T
Sbjct: 883  MGHIHGAFKLKDEMEALGISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIAT 942

Query: 470  HRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
              TL+  FCR + + EA+ L   +     K+   AY ++I GLC    V  A+++ + + 
Sbjct: 943  FTTLMHMFCRNESLVEALKLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIK 1002

Query: 530  SSRYKPDDTVFSTIVKKV 547
                 P+ T +  ++  +
Sbjct: 1003 QRGLWPNMTTYCILIDAI 1020



 Score = 56.2 bits (134), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 31/123 (25%), Positives = 60/123 (48%)

Query: 113  VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
            + + +   + +++     GK+ +A  ++D M R++ IP       L+    R + + +A 
Sbjct: 901  ISSGDVAESALVRGLAKCGKVEEAKLVLDFMLRKSLIPTIATFTTLMHMFCRNESLVEAL 960

Query: 173  KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            K+   M       D I YN+++ GLC  G + SA+ L  E+   G  P++ TY  ++  +
Sbjct: 961  KLKDTMDFCDVKLDVIAYNVLISGLCADGDVASALKLYKEIKQRGLWPNMTTYCILIDAI 1020

Query: 233  FDN 235
            F N
Sbjct: 1021 FTN 1023


>gi|449491568|ref|XP_004158939.1| PREDICTED: pentatricopeptide repeat-containing protein At3g22470,
           mitochondrial-like [Cucumis sativus]
          Length = 412

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 116/401 (28%), Positives = 208/401 (51%), Gaps = 20/401 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRI------- 168
           D  T N +    C+  ++++    +  + RR  IPD      LI+GL R+ RI       
Sbjct: 9   DLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATCII 68

Query: 169 ----------EKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGC 218
                     ++A ++ + M   G +P+ I+Y+ +V G C  G++  +  L +EM   G 
Sbjct: 69  IDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQGV 128

Query: 219 EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIE 278
           +P+++ +N ++  +   GK  +A    +  +++G    L+TY  LI+  CK   ++ A +
Sbjct: 129 QPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSARK 188

Query: 279 VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLG 338
           +   M  +GC  + ++Y  L+N  CK  K ++A+ + N +   G  PN  TY+TLL  L 
Sbjct: 189 LFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLL 248

Query: 339 SRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIV 398
             G     +K+  +M  +  S     Y I ++GLCK G++  A+  FN++ S N + D  
Sbjct: 249 QTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFE 308

Query: 399 TYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY--- 455
           +Y+ ++  LCK G +  A +    L+     P ++T N +I G  +   ++KA +L+   
Sbjct: 309 SYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKM 368

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            +M ENG +PD IT+ TL+ GFC ++++EE V+LL ++ KR
Sbjct: 369 EKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/404 (28%), Positives = 202/404 (50%), Gaps = 28/404 (6%)

Query: 150 PDFHFCINLIRG-LIRIDRIEKASKVLQIMVMSGGVPDTITYNMM--------------- 193
           PD  F +N++   L  ++R+ +    +  ++  G +PD +TYN +               
Sbjct: 8   PDL-FTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHRISVATC 66

Query: 194 --VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRK 251
             + GLCK G    A  + +EM   G  P+VI+Y++++      GK +++   + + + +
Sbjct: 67  IIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLFNEMVDQ 126

Query: 252 GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
           G  P L+ + +LI+ +CK+  +  A ++L+     G   D+VTYNSL++  CK G    A
Sbjct: 127 GVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKIGDLSSA 186

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE---ASHSPTVFTYNIL 368
             +  ++ S+G E N I+Y  L++  G    W  V++ +++ NE       P V TY+ L
Sbjct: 187 RKLFLSMPSKGCEHNEISYTILIN--GYCKIWK-VEEAMNLYNEMPQVGKRPNVKTYSTL 243

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           + GL + G V  A   F  M +     D   Y   L  LCK G+L EA++L + L   + 
Sbjct: 244 LTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNF 303

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
                +Y+ LIDGL K G +E A   + Q+ + G+ P+ +T   +I GFCR +QV++A  
Sbjct: 304 KLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANI 363

Query: 489 LLKEIGK---RGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           L +++ K    G       Y  ++ G C+S K++  + +L  M 
Sbjct: 364 LFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMF 407



 Score =  166 bits (419), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 105/408 (25%), Positives = 199/408 (48%), Gaps = 20/408 (4%)

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM----- 232
           M ++G  PD  T N++   LC   ++   +A +  +   G  PD++TYNT+++ +     
Sbjct: 1   MHLAGLSPDLFTLNILANCLCNLNRVSEGLAAMTGILRRGYIPDIVTYNTLIKGLCRVHR 60

Query: 233 --------FDN----GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
                    D     G   +A   +++   +G  P +I+Y+ L+   C    +  +  + 
Sbjct: 61  ISVATCIIIDGLCKVGHEDEAKEIFEEMKAQGMIPNVISYSSLVHGFCCAGKLEESKRLF 120

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           ++M  +G  P++V +N L++  CK+GK  +A  ++   + RG+  + +TYN+L+      
Sbjct: 121 NEMVDQGVQPNLVQFNVLIDILCKEGKVIEAKKLLEVTIQRGIILDLVTYNSLIDGFCKI 180

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
           G   +  K+   M          +Y ILING CK   V+ A+N +N+M     +P++ TY
Sbjct: 181 GDLSSARKLFLSMPSKGCEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTY 240

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           +T+L  L + G + +A +L  ++  S  S     Y   +DGL K G + +AM L+ ++  
Sbjct: 241 STLLTGLLQTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKS 300

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
                D  ++  LI G C+A +VE A +  K++ + G +       ++IHG C+ ++VD 
Sbjct: 301 YNFKLDFESYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDK 360

Query: 521 A---IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           A    + +E M  +   PD   ++T+++   +    EE   L  K+ +
Sbjct: 361 ANILFEKMEKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFK 408



 Score = 96.3 bits (238), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 58/221 (26%), Positives = 115/221 (52%), Gaps = 6/221 (2%)

Query: 104 SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLI 163
           S+PS      E++E +   ++  +C   K+ +A  L + M +  + P+      L+ GL+
Sbjct: 192 SMPSKG---CEHNEISYTILINGYCKIWKVEEAMNLYNEMPQVGKRPNVKTYSTLLTGLL 248

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
           +  ++  A+K+  +M  SG   D+  Y + + GLCK G +  A+ L +E+     + D  
Sbjct: 249 QTGKVGDANKLFGVMKASGISVDSCIYVIFLDGLCKNGVLFEAMELFNELKSYNFKLDFE 308

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA---IEVL 280
           +Y+ ++  +   GK + A  F+K   ++G  P ++T  I+I   C+   + +A    E +
Sbjct: 309 SYSRLIDGLCKAGKVEIAWEFFKQLSQEGLQPNVVTCNIMIHGFCRVEQVDKANILFEKM 368

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSR 321
           + M   GC+PDI+TYN+L+   C+  K ++ V +++ +  R
Sbjct: 369 EKMEENGCTPDIITYNTLLRGFCESNKLEEVVNLLHKMFKR 409


>gi|414877568|tpg|DAA54699.1| TPA: hypothetical protein ZEAMMB73_211194, partial [Zea mays]
          Length = 709

 Score =  188 bits (478), Expect = 6e-45,   Method: Compositional matrix adjust.
 Identities = 127/456 (27%), Positives = 232/456 (50%), Gaps = 7/456 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V+ D  T N +++  C   ++ +A ++I  M +    PD      ++  L +  R+ +  
Sbjct: 229 VDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISYFTVMSFLCKEKRVAEVW 288

Query: 173 KVLQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +L+ M    G+ PD ITYNM++ GL K G    A+  L E        D + Y+ I+ +
Sbjct: 289 NLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHS 348

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
              NG+  +A     + + KGC P ++TY+ +++  C+   + +A +++  M   GC P+
Sbjct: 349 FCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPN 408

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKIL 350
            VT+ +L+N  CK GK  +A  ++N        P+ ITY+ ++H     G   ++ D ++
Sbjct: 409 TVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVM 468

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
            ++ +    PT    N+LI+ LCK     RA +   Q  SK C  ++V + TV+    ++
Sbjct: 469 QMLQKGFF-PTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCFINVVNFTTVIHGFSRQ 527

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G L  AL LL  +  ++  P ++TY  ++D L +KG M++A  L  +M+  G+ P  +T+
Sbjct: 528 GDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATALVEKMLNRGLLPTPVTY 587

Query: 471 RTLIWGFCRADQVEEAVDLL-KEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
           RT+I  +C    VE+ ++LL K + K+G    +SAY  VI  LC   K+  A  +L  ++
Sbjct: 588 RTVIHRYCEKGAVEDLLNLLDKMLTKQGF---SSAYNQVIEKLCAFGKLSEAYNLLSKVL 644

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            S  K D      ++    + G+  ++Y +  ++ +
Sbjct: 645 RSASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQ 680



 Score =  175 bits (443), Expect = 7e-41,   Method: Compositional matrix adjust.
 Identities = 115/438 (26%), Positives = 214/438 (48%), Gaps = 2/438 (0%)

Query: 129 SRGKLTD-ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           SR +L D A +++ +M RR          +L+    R  ++  A +VLQ+M   G  PD 
Sbjct: 139 SRTRLHDPARRVVRLMIRRGIRRGTRQFAHLMLSYSRAGKLRSAMRVLQLMQKDGCAPDI 198

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
              N+ V  L   G++  A+   + M   G +PDV+TYN +++ +    +  +A+     
Sbjct: 199 CICNVAVNVLVVAGRVDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGS 258

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE-GCSPDIVTYNSLVNFSCKQG 306
            L+ GCPP  I+Y  ++  +CK+  +A    +L+ M  + G  PD +TYN L++   K G
Sbjct: 259 MLQNGCPPDKISYFTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHG 318

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             D+A+  +     +    + + Y+ ++HS    G      +I+  M      P V TY+
Sbjct: 319 HADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYS 378

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +++G C+ G +D+A      M    C+P+ VT+  +L  LCK G  +EA +LL+     
Sbjct: 379 AVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEE 438

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
             +P  ITY+ ++ G  ++G + ++  +  QM++ G  P  +    LI   C+  +   A
Sbjct: 439 WWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARA 498

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
            D +++   +G  +    +  VIHG  +   ++ A+ +L+ M  +   PD   ++ +V  
Sbjct: 499 KDFMEQCQSKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDA 558

Query: 547 VADDGMTEEAYKLWQKLI 564
           +   G  +EA  L +K++
Sbjct: 559 LGRKGKMKEATALVEKML 576



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 114/435 (26%), Positives = 222/435 (51%), Gaps = 3/435 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G++  A +  + M R    PD      LI+GL    RI +A +++  M+ +G  PD I+Y
Sbjct: 212 GRVDKALEFAERMRRVGVDPDVVTYNCLIKGLCGARRIVEALEMIGSMLQNGCPPDKISY 271

Query: 191 NMMVGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
             ++  LCK  ++     LL+ M + +G  PD ITYN ++  +  +G   +A+ F ++  
Sbjct: 272 FTVMSFLCKEKRVAEVWNLLERMRNDAGIFPDQITYNMLIHGLAKHGHADEALTFLRESE 331

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            K      + Y+ ++   C    ++ A E++ +M  +GC PD+VTY+++V+  C+ G+ D
Sbjct: 332 GKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCRIGELD 391

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A  ++ ++   G +PN++T+  LL+ L   G      ++L+   E   +P+  TY++++
Sbjct: 392 QARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGITYSVIM 451

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +G  + G +  + +   QM+ K   P  V  N ++ ALCKE     A   +       C 
Sbjct: 452 HGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQSKGCF 511

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
             ++ + T+I G +++G +E A+ L   M      PD +T+  ++    R  +++EA  L
Sbjct: 512 INVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMKEATAL 571

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           ++++  RG       YR VIH  C+   V+  + +L+ M++   +   + ++ +++K+  
Sbjct: 572 VEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTK--QGFSSAYNQVIEKLCA 629

Query: 550 DGMTEEAYKLWQKLI 564
            G   EAY L  K++
Sbjct: 630 FGKLSEAYNLLSKVL 644



 Score =  140 bits (354), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 93/362 (25%), Positives = 181/362 (50%), Gaps = 2/362 (0%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L  S+G     D+   + I+ +FC  G++++A ++I  M  +   PD      ++ G  R
Sbjct: 327 LRESEGKRFRVDQVGYSAIVHSFCLNGRMSEAKEIIGEMISKGCRPDVVTYSAVVDGFCR 386

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           I  +++A K+++ M  +G  P+T+T+  ++ GLCK G+   A  LL++       P  IT
Sbjct: 387 IGELDQARKMMKHMYKNGCKPNTVTHTALLNGLCKVGKSSEAWELLNKSEEEWWTPSGIT 446

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y+ I+      GK  ++       L+KG  P  +   +LI  +CK+   ARA + ++   
Sbjct: 447 YSVIMHGFRREGKLVESCDVVMQMLQKGFFPTAVEINLLIHALCKEQKPARAKDFMEQCQ 506

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +GC  ++V + ++++   +QG  + A+ +++++      P+ +TY  ++ +LG +G   
Sbjct: 507 SKGCFINVVNFTTVIHGFSRQGDLESALSLLDDMYLTNRHPDVVTYTVVVDALGRKGKMK 566

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               +++ M      PT  TY  +I+  C+ G V+  +N  ++M++K  Q     YN V+
Sbjct: 567 EATALVEKMLNRGLLPTPVTYRTVIHRYCEKGAVEDLLNLLDKMLTK--QGFSSAYNQVI 624

Query: 405 GALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS 464
             LC  G L+EA  LL  +  S+      T + L+D    +G   ++  +  +M +  + 
Sbjct: 625 EKLCAFGKLSEAYNLLSKVLRSASKRDAQTCHILMDSFLNRGLPLQSYNVACRMFQRNLI 684

Query: 465 PD 466
           PD
Sbjct: 685 PD 686



 Score =  114 bits (286), Expect = 9e-23,   Method: Compositional matrix adjust.
 Identities = 79/296 (26%), Positives = 141/296 (47%), Gaps = 3/296 (1%)

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+ VL  M  +GC+PDI   N  VN     G+ D A+     +   G++P+ +TYN L+ 
Sbjct: 182 AMRVLQLMQKDGCAPDICICNVAVNVLVVAGRVDKALEFAERMRRVGVDPDVVTYNCLIK 241

Query: 336 SL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS-KNC 393
            L G+R   +A++ I  ++      P   +Y  +++ LCK   V    N   +M +    
Sbjct: 242 GLCGARRIVEALEMIGSMLQNGC-PPDKISYFTVMSFLCKEKRVAEVWNLLERMRNDAGI 300

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            PD +TYN ++  L K G  +EAL  L    G       + Y+ ++      G M +A  
Sbjct: 301 FPDQITYNMLIHGLAKHGHADEALTFLRESEGKRFRVDQVGYSAIVHSFCLNGRMSEAKE 360

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           + G+M+  G  PD +T+  ++ GFCR  ++++A  ++K + K G K     +  +++GLC
Sbjct: 361 IIGEMISKGCRPDVVTYSAVVDGFCRIGELDQARKMMKHMYKNGCKPNTVTHTALLNGLC 420

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
           K  K   A ++L       + P    +S I+     +G   E+  +  ++++   F
Sbjct: 421 KVGKSSEAWELLNKSEEEWWTPSGITYSVIMHGFRREGKLVESCDVVMQMLQKGFF 476


>gi|115475728|ref|NP_001061460.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|38175588|dbj|BAD01297.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|38175668|dbj|BAD01373.1| pentatricopeptide (PPR) repeat-containing protein-like [Oryza
           sativa Japonica Group]
 gi|113623429|dbj|BAF23374.1| Os08g0290000 [Oryza sativa Japonica Group]
 gi|125602875|gb|EAZ42200.1| hypothetical protein OsJ_26764 [Oryza sativa Japonica Group]
          Length = 806

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 129/488 (26%), Positives = 222/488 (45%), Gaps = 48/488 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G++ +A +L   M +    P       LI GL R +R  +   VLQ M
Sbjct: 258 TYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGERFGEVGIVLQEM 317

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G  P+ + YN ++G  C++G    A+ L DEM +   +P  +TYN I + +   G+ 
Sbjct: 318 EQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEM 377

Query: 239 KQAIGFWKDQLR------------------------------------KGCPPYLITYTI 262
           ++A    +D L                                     +G  P     T 
Sbjct: 378 ERAERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTA 437

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY-DDAVLVINNLLSR 321
            + ++CK      A+ +      +G   ++ T N+L++  C +GKY  +A  VI  +L++
Sbjct: 438 CMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLC-EGKYMKEATKVIQTMLNK 496

Query: 322 GMEPNSITYNTLLHSLGSRGC-----WDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
           G+E +SITYN ++     RGC      +   K+   M      P +FT+N L++  C  G
Sbjct: 497 GIELDSITYNIMI-----RGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLG 551

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            ++   +  +QM ++  QPDIV+Y T++   CK   + +A + L  L      P +  YN
Sbjct: 552 KMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYN 611

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            LI G  + G +  A+     M  NGI P ++T+ +L++  C A  VEEA  +  +  + 
Sbjct: 612 ALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQAREN 671

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
              +    Y ++I G CK  K+  A+   E M S    P+   ++T++   +  G +EEA
Sbjct: 672 NVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEA 731

Query: 557 YKLWQKLI 564
            KL+ +++
Sbjct: 732 SKLFDEMV 739



 Score =  183 bits (465), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 109/439 (24%), Positives = 216/439 (49%), Gaps = 3/439 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI-RGLIRIDRIEKA 171
           V  +E   N+++   C +G  + A +L D M  +   P      NLI + L +   +E+A
Sbjct: 322 VSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPT-AVTYNLIAKALCKEGEMERA 380

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQ-IRSAIALLDEMSVSGCEPDVITYNTILR 230
            ++L+ M+  G       +N +V  L +R + + S +++ +EM   G  P+       +R
Sbjct: 381 ERILEDMLSIGMTVHCGLFNTVVAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMR 440

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +   GK ++A+G W   L KG    L T   LI  +C+   +  A +V+  M  +G   
Sbjct: 441 ELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYMKEATKVIQTMLNKGIEL 500

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D +TYN ++   CK  K ++A+ +  ++  RG +P+  T+NTLLH+  + G  +    +L
Sbjct: 501 DSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLL 560

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           D M      P + +Y  +I+G CK   + +A     +++ +  +P++  YN ++G   + 
Sbjct: 561 DQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGYGRN 620

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G ++ A+  +  +  +   P  +TY +L+  +   G +E+A  ++ Q  EN +    I +
Sbjct: 621 GDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGVIGY 680

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             +I G+C+  ++ EAV   +E+  RG       Y  +++   KS   + A ++ + M+ 
Sbjct: 681 TIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDEMVG 740

Query: 531 SRYKPDDTVFSTIVKKVAD 549
           S   PD+  + T++ + ++
Sbjct: 741 SGVIPDNITYGTLIARCSE 759



 Score =  174 bits (441), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 121/487 (24%), Positives = 223/487 (45%), Gaps = 41/487 (8%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMAR-RNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           KT N  L+     G+L  A ++ D M   RN   + +    +I+ L +  +++   ++L 
Sbjct: 186 KTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAMIKALCKAGKVDAGFEMLA 245

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            +  +G  P  +TYN+++  LCK G++  A  L   M   G  P V+T+  ++  +    
Sbjct: 246 ELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGMTPSVVTFGILINGLARGE 305

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           +F +     ++  + G  P  + Y  LI   C++   ++A+ + D+M ++   P  VTYN
Sbjct: 306 RFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALRLFDEMVLKKMKPTAVTYN 365

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE- 355
            +    CK+G+ + A  ++ ++LS GM  +   +NT++  L  R     ++ ++ I NE 
Sbjct: 366 LIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLLQR--TRRLESVVSITNEM 423

Query: 356 ----------------------ASHSPTV---------------FTYNILINGLCKYGLV 378
                                   H   V                T N LI+GLC+   +
Sbjct: 424 VTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNLATSNALIHGLCEGKYM 483

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A      M++K  + D +TYN ++   CK+  + EA++L   +      P L T+NTL
Sbjct: 484 KEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTL 543

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +      G ME+   L  QM   G+ PD +++ T+I G C+A  + +A + L E+  RG 
Sbjct: 544 LHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGL 603

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           K     Y  +I G  ++  +  AI  +E M S+  +P +  + +++  +   G+ EEA  
Sbjct: 604 KPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKT 663

Query: 559 LWQKLIE 565
           ++ +  E
Sbjct: 664 IFSQARE 670



 Score =  145 bits (365), Expect = 7e-32,   Method: Compositional matrix adjust.
 Identities = 97/412 (23%), Positives = 178/412 (43%), Gaps = 37/412 (8%)

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTI 228
           +A+   +++   G  P   T N  +  L + GQ+ +A  + DEM  S     +  +Y  +
Sbjct: 168 RAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEYSYTAM 227

Query: 229 LRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
           ++ +   GK         +  R G  P ++TY +L++ +CK   +  A  +   M   G 
Sbjct: 228 IKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRMEQGGM 287

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
           +P +VT+  L+N   +  ++ +  +V+  +   G+ PN + YN L+     +G      +
Sbjct: 288 TPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHCSQALR 347

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRA--------------------------- 381
           + D M      PT  TYN++   LCK G ++RA                           
Sbjct: 348 LFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTVVAWLL 407

Query: 382 ---------INSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
                    ++  N+MV++  +P+       +  LCK G   EA+ +            L
Sbjct: 408 QRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTLNKGLGVNL 467

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
            T N LI GL +   M++A  +   M+  GI  D IT+  +I G C+  ++EEA+ L  +
Sbjct: 468 ATSNALIHGLCEGKYMKEATKVIQTMLNKGIELDSITYNIMIRGCCKDSKMEEAIKLHGD 527

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           + +RG K     +  ++H  C   K++    +L+ M +   +PD   + TI+
Sbjct: 528 MTRRGFKPDLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTII 579



 Score =  115 bits (288), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 77/289 (26%), Positives = 123/289 (42%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T N +++  C   K+ +A KL   M RR   PD      L+     + ++E+  
Sbjct: 498 IELDSITYNIMIRGCCKDSKMEEAIKLHGDMTRRGFKPDLFTFNTLLHAYCNLGKMEETF 557

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  M   G  PD ++Y  ++ G CK   IR A   L E+   G +P+V  YN ++   
Sbjct: 558 HLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYLTELMDRGLKPNVFIYNALIGGY 617

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG    AI   +     G  P  +TY  L+  +C    +  A  +            +
Sbjct: 618 GRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHAGLVEEAKTIFSQARENNVDLGV 677

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           + Y  ++   CK GK  +AV     + SRG+ PN +TY TL+++    G  +   K+ D 
Sbjct: 678 IGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTYTTLMYAYSKSGNSEEASKLFDE 737

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
           M  +   P   TY  LI    +   +D+ I    ++ S     D   YN
Sbjct: 738 MVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSSGALTKDDRMYN 786



 Score =  112 bits (280), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 70/297 (23%), Positives = 142/297 (47%), Gaps = 2/297 (0%)

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL-SRGMEPNSI 328
           Q  + RA +    ++  G  P I T N+ +    + G+ D A  V + +  SR +  N  
Sbjct: 163 QGSLCRAADAFRVLSSRGAPPSIKTCNAFLEALVRAGQLDAAREVFDEMRESRNVALNEY 222

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           +Y  ++ +L   G  DA  ++L  +  A   PTV TYN+L++ LCK G V+ A     +M
Sbjct: 223 SYTAMIKALCKAGKVDAGFEMLAELWRAGLQPTVVTYNVLMDALCKSGRVEEAFRLKGRM 282

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
                 P +VT+  ++  L +     E   +L  +     SP  + YN LI    +KG  
Sbjct: 283 EQGGMTPSVVTFGILINGLARGERFGEVGIVLQEMEQLGVSPNEVIYNELIGWHCRKGHC 342

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +A+ L+ +M+   + P  +T+  +    C+  ++E A  +L+++   G  +    +  V
Sbjct: 343 SQALRLFDEMVLKKMKPTAVTYNLIAKALCKEGEMERAERILEDMLSIGMTVHCGLFNTV 402

Query: 509 IHGLC-KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +  L  ++++++  + +   M++   +P+D + +  ++++   G  +EA  +W K +
Sbjct: 403 VAWLLQRTRRLESVVSITNEMVTRGMRPNDPLMTACMRELCKGGKHQEAVGIWFKTL 459



 Score = 83.2 bits (204), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 61/262 (23%), Positives = 108/262 (41%), Gaps = 35/262 (13%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L  +C+ GK+ +   L+D M      PD      +I G  +   I KA + L
Sbjct: 536 DLFTFNTLLHAYCNLGKMEETFHLLDQMKTEGLQPDIVSYGTIIDGHCKAKDIRKAKEYL 595

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL------ 229
             ++  G  P+   YN ++GG  + G I  AI  ++ M  +G +P  +TY +++      
Sbjct: 596 TELMDRGLKPNVFIYNALIGGYGRNGDISGAIDAVETMKSNGIQPTNVTYGSLMYWMCHA 655

Query: 230 ------RTMFDN-----------------------GKFKQAIGFWKDQLRKGCPPYLITY 260
                 +T+F                         GK  +A+ ++++   +G  P  +TY
Sbjct: 656 GLVEEAKTIFSQARENNVDLGVIGYTIMIQGYCKLGKMVEAVAYFEEMRSRGISPNKLTY 715

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           T L+    K      A ++ D+M   G  PD +TY +L+    +    D  +     L S
Sbjct: 716 TTLMYAYSKSGNSEEASKLFDEMVGSGVIPDNITYGTLIARCSEVNSLDKDIGHTAELSS 775

Query: 321 RGMEPNSITYNTLLHSLGSRGC 342
             +  +   YN L + + +  C
Sbjct: 776 GALTKDDRMYNILSNGINAPWC 797


>gi|224139020|ref|XP_002322960.1| predicted protein [Populus trichocarpa]
 gi|222867590|gb|EEF04721.1| predicted protein [Populus trichocarpa]
          Length = 694

 Score =  188 bits (478), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 119/481 (24%), Positives = 223/481 (46%), Gaps = 35/481 (7%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           ++ N +L  F     L  A   +        +P+      LI+  ++  +  +A  +L  
Sbjct: 115 RSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDW 174

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M      PD  +Y  ++ G+ K G + SA+ + DEM   G  PDV+ YN ++   F  G 
Sbjct: 175 MWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGD 234

Query: 238 FKQAIGFWKDQLRKGCP-PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           + Q    W+  ++  C  P ++TY ++I  +CK      ++E+ + M    C  D+ TY+
Sbjct: 235 YVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYS 294

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS----------------LGSR 340
           SL+   C  G  D AV V   ++ R +  + +TYN LL+                 +G  
Sbjct: 295 SLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKE 354

Query: 341 GCWDAVD------------------KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
            C + V                    + +++          TY +LI+GLCK G +++A+
Sbjct: 355 NCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKAL 414

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
               +      + D   Y++++  L K+G ++EAL ++H ++   C       N LI+G 
Sbjct: 415 KILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGF 474

Query: 443 AKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN 502
            +   +E+A+  + +M   G SP  +++ TLI G C+A++  +A   +KE+ ++  K   
Sbjct: 475 VRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDM 534

Query: 503 SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQK 562
             Y L++ GLC+ KK+DMA+ +   ++    +PD T+ + ++  +   G  E+A  L+  
Sbjct: 535 ITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSN 594

Query: 563 L 563
           +
Sbjct: 595 M 595



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 114/436 (26%), Positives = 213/436 (48%), Gaps = 36/436 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   C  G+  ++ ++ + M +     D     +LI GL  +  ++ A +V + M
Sbjct: 257 TYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLCDVGNVDGAVEVYKEM 316

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V    V D +TYN ++ G C+ G+I+ +  L   M    C  +V++YN  +R +F+N K 
Sbjct: 317 VKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVVSYNIFIRGLFENRKV 375

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++AI  W+   R+G      TY +LI  +CK   + +A+++L +    G   D   Y+S+
Sbjct: 376 EEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEAKDGGDKLDAFAYSSI 435

Query: 299 VNFSCKQGKYDDAVLVINNL-----------------------------------LSRGM 323
           V+   KQG+ D+A+ +++ +                                    ++G 
Sbjct: 436 VDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKLEEAICFFREMETKGC 495

Query: 324 EPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAIN 383
            P  ++YNTL++ L     +      +  M E    P + TY++L++GLC+   +D A+N
Sbjct: 496 SPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLLMDGLCQGKKIDMALN 555

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            + Q++ K  +PD+  +N ++  LC  G + +AL L   +  S+C P L+T+NTL+DGL 
Sbjct: 556 LWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLY 615

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNS 503
           K    E A V++  M +NG  PD I++   + G C   ++ + + L  +  K G    + 
Sbjct: 616 KARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSI 675

Query: 504 AYRLVIHGLCKSKKVD 519
            + +++  + K   +D
Sbjct: 676 TWYILVRAVLKLGPLD 691



 Score =  177 bits (450), Expect = 1e-41,   Method: Compositional matrix adjust.
 Identities = 122/483 (25%), Positives = 225/483 (46%), Gaps = 41/483 (8%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKV 174
           D  +   ++      G L  A ++ D M  R  +PD   C N +I G  +     +  ++
Sbjct: 183 DVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDV-MCYNIMIDGFFKRGDYVQGKEI 241

Query: 175 LQIMVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
            + +V    V P+ +TYN+M+ GLCK G+   ++ + + M  + CE D+ TY++++  + 
Sbjct: 242 WERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICGLC 301

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           D G    A+  +K+ +++     ++TY  L+   C+   I  + E+   M  E C  ++V
Sbjct: 302 DVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCH-NVV 360

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           +YN  +    +  K ++A+ V   L  RG   +S TY  L+H L   G  +   KIL   
Sbjct: 361 SYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKEA 420

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAIN------------------------------ 383
            +       F Y+ +++GL K G VD A+                               
Sbjct: 421 KDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASKL 480

Query: 384 -----SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
                 F +M +K C P +V+YNT++  LCK    ++A   +  +      P +ITY+ L
Sbjct: 481 EEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSLL 540

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           +DGL +   ++ A+ L+ Q++  G+ PD   H  L+ G C A ++E+A+ LL    K+ N
Sbjct: 541 MDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIEDAL-LLYSNMKQSN 599

Query: 499 KMRN-SAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            + N   +  ++ GL K+++ +MA  +   M  + ++PD   ++  +K +   G   +  
Sbjct: 600 CLPNLVTHNTLMDGLYKARECEMASVIWACMFKNGFQPDIISYNITLKGLCSCGRISDGI 659

Query: 558 KLW 560
            L+
Sbjct: 660 ALF 662



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 113/442 (25%), Positives = 206/442 (46%), Gaps = 35/442 (7%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+   I  + +EKA   L      G +P+  TYN+++    K+ Q   A  LLD M    
Sbjct: 120 LLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGLLDWMWSKD 179

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            +PDV +Y T++  M  +G    A+  + +   +G  P ++ Y I+I+   K+    +  
Sbjct: 180 LKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFKRGDYVQGK 239

Query: 278 EVLDDMAIEGC-SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           E+ + +    C  P++VTYN ++N  CK G++D+++ +   +     E +  TY++L+  
Sbjct: 240 EIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLFTYSSLICG 299

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ-- 394
           L   G  D   ++   M + S    V TYN L+NG C+ G +  +   +  M  +NC   
Sbjct: 300 LCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELWVMMGKENCHNV 359

Query: 395 --------------------------------PDIVTYNTVLGALCKEGMLNEALQLLHL 422
                                            D  TY  ++  LCK G LN+AL++L  
Sbjct: 360 VSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKNGHLNKALKILKE 419

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
                       Y++++DGL+K+G +++A+ +  QM + G          LI GF RA +
Sbjct: 420 AKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQMDKYGCELSPHVCNPLINGFVRASK 479

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
           +EEA+   +E+  +G      +Y  +I+GLCK+++   A   ++ M+   +KPD   +S 
Sbjct: 480 LEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLEKDWKPDMITYSL 539

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           ++  +      + A  LW++++
Sbjct: 540 LMDGLCQGKKIDMALNLWRQVL 561



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 95/343 (27%), Positives = 180/343 (52%), Gaps = 2/343 (0%)

Query: 215 VSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIA 274
           + GC+P + +YN +L    +    ++A  F       G  P L TY ILI+   K+    
Sbjct: 107 IFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFV 166

Query: 275 RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLL 334
            A  +LD M  +   PD+ +Y +++N   K G    A+ V + +  RG+ P+ + YN ++
Sbjct: 167 EAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMI 226

Query: 335 HSLGSRGCWDAVDKILDIMNEAS-HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
                RG +    +I + + + S   P V TYN++INGLCK G  D ++  + +M    C
Sbjct: 227 DGFFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNEC 286

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
           + D+ TY++++  LC  G ++ A+++   +   S    ++TYN L++G  + G ++++  
Sbjct: 287 EMDLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFE 346

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L+  MM      + +++   I G     +VEEA+ + + + +RG+   ++ Y ++IHGLC
Sbjct: 347 LW-VMMGKENCHNVVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLC 405

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           K+  ++ A+++L+       K D   +S+IV  ++  G  +EA
Sbjct: 406 KNGHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEA 448



 Score =  156 bits (395), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 96/348 (27%), Positives = 174/348 (50%), Gaps = 2/348 (0%)

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P   +YN ++    +   +  A + L      G  P++ TYN +++      +F +A
Sbjct: 109 GCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEA 168

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
            G       K   P + +Y  +I  + K   +  A+EV D+M   G  PD++ YN +++ 
Sbjct: 169 KGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDG 228

Query: 302 SCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             K+G Y     +   L+    + PN +TYN +++ L   G +D   ++ + M +     
Sbjct: 229 FFKRGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEM 288

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +FTY+ LI GLC  G VD A+  + +MV ++   D+VTYN +L   C+ G + E+ +L 
Sbjct: 289 DLFTYSSLICGLCDVGNVDGAVEVYKEMVKRSVVVDVVTYNALLNGFCRAGKIKESFELW 348

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
            ++   +C   +++YN  I GL +   +E+A+ ++  +   G   D  T+  LI G C+ 
Sbjct: 349 VMMGKENCHN-VVSYNIFIRGLFENRKVEEAISVWELLRRRGSGADSTTYGVLIHGLCKN 407

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELM 528
             + +A+ +LKE    G+K+   AY  ++ GL K  +VD A+ ++  M
Sbjct: 408 GHLNKALKILKEAKDGGDKLDAFAYSSIVDGLSKQGRVDEALGIVHQM 455



 Score =  100 bits (248), Expect = 3e-18,   Method: Compositional matrix adjust.
 Identities = 63/228 (27%), Positives = 112/228 (49%), Gaps = 4/228 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  F    KL +A      M  +   P       LI GL + +R   A   ++ M+ 
Sbjct: 468 NPLINGFVRASKLEEAICFFREMETKGCSPTVVSYNTLINGLCKAERFSDAYSFVKEMLE 527

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PD ITY++++ GLC+  +I  A+ L  ++ V G EPDV  +N ++  +   GK + 
Sbjct: 528 KDWKPDMITYSLLMDGLCQGKKIDMALNLWRQVLVKGLEPDVTMHNILMHGLCSAGKIED 587

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCK--QCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           A+  + +  +  C P L+T+  L++ + K  +C +A  I     M   G  PDI++YN  
Sbjct: 588 ALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMASVIWAC--MFKNGFQPDIISYNIT 645

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           +   C  G+  D + + ++ L  G+ P SIT+  L+ ++   G  D++
Sbjct: 646 LKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAVLKLGPLDSL 693



 Score = 80.5 bits (197), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 48/207 (23%), Positives = 107/207 (51%), Gaps = 1/207 (0%)

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           P + +YN L+N   +  L+++A +      +    P++ TYN ++    K+    EA  L
Sbjct: 112 PGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNILIKISVKKRQFVEAKGL 171

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +      P + +Y T+I+G+ K G +  A+ ++ +M E G+ PD + +  +I GF +
Sbjct: 172 LDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGLVPDVMCYNIMIDGFFK 231

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
                +  ++ + + K      N   Y ++I+GLCK  + D ++++ E M  +  + D  
Sbjct: 232 RGDYVQGKEIWERLVKGSCVYPNVVTYNVMINGLCKMGRFDESLEMWERMKKNECEMDLF 291

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +S+++  + D G  + A ++++++++
Sbjct: 292 TYSSLICGLCDVGNVDGAVEVYKEMVK 318



 Score = 70.5 bits (171), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 41/124 (33%), Positives = 63/124 (50%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D   +N ++   CS GK+ DA  L   M + N +P+      L+ GL +    E AS
Sbjct: 565 LEPDVTMHNILMHGLCSAGKIEDALLLYSNMKQSNCLPNLVTHNTLMDGLYKARECEMAS 624

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M  +G  PD I+YN+ + GLC  G+I   IAL D+   +G  P  IT+  ++R +
Sbjct: 625 VIWACMFKNGFQPDIISYNITLKGLCSCGRISDGIALFDDALKNGILPTSITWYILVRAV 684

Query: 233 FDNG 236
              G
Sbjct: 685 LKLG 688



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 54/212 (25%), Positives = 94/212 (44%), Gaps = 7/212 (3%)

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ--PDIVTYNTVLGALCKEGMLN 414
           +HSP +F   +++  L    LV         + ++ C+   D+V   TVL A  K  M N
Sbjct: 40  THSPHIFL--LILRRLSDPKLVVHVTRIVELIKTQKCKCTEDVVL--TVLKAYAKSKMPN 95

Query: 415 EALQLLHLLNG-SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           EAL     +     C P + +YN L++   +   +EKA          GI P+  T+  L
Sbjct: 96  EALDCFQKMEEIFGCKPGIRSYNALLNAFIEANLLEKAESFLAYFETVGILPNLQTYNIL 155

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I    +  Q  EA  LL  +  +  K    +Y  VI+G+ KS  +  A++V + M     
Sbjct: 156 IKISVKKRQFVEAKGLLDWMWSKDLKPDVYSYGTVINGMVKSGDLVSALEVFDEMFERGL 215

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            PD   ++ ++      G   +  ++W++L++
Sbjct: 216 VPDVMCYNIMIDGFFKRGDYVQGKEIWERLVK 247


>gi|357450627|ref|XP_003595590.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
 gi|355484638|gb|AES65841.1| hypothetical protein MTR_2g049740 [Medicago truncatula]
          Length = 859

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 118/453 (26%), Positives = 222/453 (49%), Gaps = 6/453 (1%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE+    ++  +C  G++ DA ++ D M R     +   C  LI+G  ++ ++ +A +V 
Sbjct: 331 DERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVF 390

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV     PD  +YN ++ G C+ G++  A  L +EM   G  P V+TYNT+++ + D 
Sbjct: 391 VGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDV 450

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G +  A+  W   + +G  P  I+   +++   K     RA+ +  ++   G +   V +
Sbjct: 451 GSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAF 510

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N++++  CK GK  +A  V + +   G+ P+ ITY TL       G      +I  +M  
Sbjct: 511 NTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMER 570

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
            + S ++  YN LI+GL K   ++   +   +M ++   P++VTY T++   C E  L++
Sbjct: 571 QAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDK 630

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L   +     +P ++  + ++  L +   + +A V+  +M++  I      H     
Sbjct: 631 AFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDILA---VHNKCSD 687

Query: 476 GFCRADQVEEAVDLLKEIGKRG--NKMRNS-AYRLVIHGLCKSKKVDMAIQVLELMISSR 532
              + D   EA  +   + K    N + N+  Y + I GLCKS K+D A  VL +++S  
Sbjct: 688 KLVKNDLTLEAQKIADSLDKSDICNSLSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRG 747

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + PD+  + T++   +  G  +EA+KL  +++E
Sbjct: 748 FLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLE 780



 Score =  181 bits (460), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/479 (26%), Positives = 229/479 (47%), Gaps = 36/479 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +++ F  RG    A  + D M+R  ++P    C  L+  L++      A  V   +V +G
Sbjct: 162 LMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQIVGTG 221

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD    +++V   C+ G++  A+ +L++M   G EP+V+TYN ++      G F+   
Sbjct: 222 IVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDFEGVE 281

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-EGCSPDIVTYNSLVNF 301
              +    +G    ++T T+L+   CK+  +  A ++L ++   E    D   Y  LV+ 
Sbjct: 282 RVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGVLVDG 341

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+ G+ +DAV + + +L  G++ N +  NTL+      G     +++   M + +  P 
Sbjct: 342 YCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWNLKPD 401

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
            ++YN L++G C+ G V +A     +M+     P +VTYNTV+  L   G  ++AL L H
Sbjct: 402 CYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDALHLWH 461

Query: 422 LL-------NGSSCSPCL----------------------------ITYNTLIDGLAKKG 446
           L+       N  SC   L                            + +NT+I GL K G
Sbjct: 462 LMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGLCKMG 521

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            + +A  ++ +M E G+SPD+IT+RTL  G+C+   V+EA  +   + ++        Y 
Sbjct: 522 KLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYN 581

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            +I GL K +K++    +L  M +    P+   + T++    D+   ++A+ L+ ++IE
Sbjct: 582 SLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIE 640



 Score =  168 bits (426), Expect = 7e-39,   Method: Compositional matrix adjust.
 Identities = 123/483 (25%), Positives = 210/483 (43%), Gaps = 36/483 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L     +G+   A  + D +     +PD + C  ++    ++ R++ A +VL+ MV  G
Sbjct: 197 LLGKLVQKGEGRVAVMVFDQIVGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEG 256

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA- 241
             P+ +TYN +V G   RG       +L  MS  G   +V+T   ++R     GK  +A 
Sbjct: 257 LEPNVVTYNGLVNGYVGRGDFEGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAE 316

Query: 242 ----------------------------IGFWKD-------QLRKGCPPYLITYTILIEQ 266
                                       +G  +D        LR G    ++    LI+ 
Sbjct: 317 KLLREVEEDELLVVDERVYGVLVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKG 376

Query: 267 VCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
            CK   +  A  V   M      PD  +YN+L++  C++GK   A ++   +L  G+ P 
Sbjct: 377 YCKLGQVCEAERVFVGMVDWNLKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPT 436

Query: 327 SITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
            +TYNT++  L   G +D    +  +M E   +P   +   +++   K G  DRA+  + 
Sbjct: 437 VVTYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWK 496

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           +++ +      V +NT++  LCK G L EA  +   +     SP  ITY TL DG  K G
Sbjct: 497 EILGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNG 556

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
            +++A  + G M    +S     + +LI G  +  ++ +  DLL E+  RG       Y 
Sbjct: 557 NVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYG 616

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            +I G C  +K+D A  +   MI   + P+  V S IV  +  D    EA  +  K++++
Sbjct: 617 TLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDF 676

Query: 567 KVF 569
            + 
Sbjct: 677 DIL 679



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 112/407 (27%), Positives = 193/407 (47%), Gaps = 36/407 (8%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
            ++M++    +RG  + A+ + DEMS  G  P + + + +L  +   G+ + A+  +   
Sbjct: 158 VFDMLMKAFAERGMTKHALYVFDEMSRIGRVPGLRSCSFLLGKLVQKGEGRVAVMVFDQI 217

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           +  G  P +   +I++   C+   +  A+EVL+ M  EG  P++VTYN LVN    +G +
Sbjct: 218 VGTGIVPDVYMCSIVVNAHCQVGRVDVAMEVLEKMVKEGLEPNVVTYNGLVNGYVGRGDF 277

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD--------IMNEASHSP 360
           +    V+  +  RG+  N +T   L+     +G  D  +K+L         +++E  +  
Sbjct: 278 EGVERVLRLMSERGVSRNVVTCTMLMRGYCKKGKMDEAEKLLREVEEDELLVVDERVYGV 337

Query: 361 TVFTY----------------------------NILINGLCKYGLVDRAINSFNQMVSKN 392
            V  Y                            N LI G CK G V  A   F  MV  N
Sbjct: 338 LVDGYCQMGRMEDAVRIRDEMLRVGLKVNMVICNTLIKGYCKLGQVCEAERVFVGMVDWN 397

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
            +PD  +YNT+L   C+EG +++A  L   + G   +P ++TYNT+I GL   G  + A+
Sbjct: 398 LKPDCYSYNTLLDGYCREGKVSKAFMLCEEMLGDGITPTVVTYNTVIKGLVDVGSYDDAL 457

Query: 453 VLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
            L+  M+E G++P++I+  T++  F +    + A+ L KEI  RG      A+  +I GL
Sbjct: 458 HLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEILGRGFTKSTVAFNTMISGL 517

Query: 513 CKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
           CK  K+  A  V + M      PD+  + T+      +G  +EA+++
Sbjct: 518 CKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNVQEAFQI 564



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 109/422 (25%), Positives = 194/422 (45%), Gaps = 43/422 (10%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +++     G   DA  L  +M  R   P+   C  ++    ++   ++A  + + +
Sbjct: 439 TYNTVIKGLVDVGSYDDALHLWHLMVERGVTPNEISCCTMLDCFFKMGDSDRAMMLWKEI 498

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G    T+ +N M+ GLCK G++  A A+ D M   G  PD ITY T+      NG  
Sbjct: 499 LGRGFTKSTVAFNTMISGLCKMGKLMEAGAVFDRMKELGLSPDEITYRTLSDGYCKNGNV 558

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A        R+     +  Y  LI+ + K   +    ++L +M   G SP++VTY +L
Sbjct: 559 QEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLLVEMQTRGLSPNVVTYGTL 618

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL--------------------- 337
           ++  C + K D A  +   ++ RG  PN +  + ++ SL                     
Sbjct: 619 ISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRDDRISEATVILDKMLDFDI 678

Query: 338 ------------------GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
                              ++   D++DK  DI N  S++     YNI I+GLCK G +D
Sbjct: 679 LAVHNKCSDKLVKNDLTLEAQKIADSLDKS-DICNSLSNN---IVYNIAIDGLCKSGKLD 734

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A +  + ++S+   PD  TY T++ A    G ++EA +L   +      P +  YN LI
Sbjct: 735 EARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFKLRDEMLEKGLIPNITIYNALI 794

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +GL K G +++A  L+ ++ + G+ P+ +T+  LI  +CR   +++A  L +++ + G  
Sbjct: 795 NGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYCRIGDLDKASRLREKMTEEGIS 854

Query: 500 MR 501
            R
Sbjct: 855 TR 856



 Score =  137 bits (345), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 89/311 (28%), Positives = 150/311 (48%), Gaps = 14/311 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DE T   +   +C  G + +A ++  +M R+          +LI GL +I ++   + +L
Sbjct: 541 DEITYRTLSDGYCKNGNVQEAFQIKGVMERQAMSASIEMYNSLIDGLFKIRKLNDVTDLL 600

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M   G  P+ +TY  ++ G C   ++  A  L  EM   G  P+V+  + I+ +++ +
Sbjct: 601 VEMQTRGLSPNVVTYGTLISGWCDEQKLDKAFHLYFEMIERGFTPNVVVCSKIVSSLYRD 660

Query: 236 GKFKQA-------IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGC 288
            +  +A       + F    +   C   L+   + +E         +  + LD   I   
Sbjct: 661 DRISEATVILDKMLDFDILAVHNKCSDKLVKNDLTLEA-------QKIADSLDKSDICNS 713

Query: 289 SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDK 348
             + + YN  ++  CK GK D+A  V++ L+SRG  P++ TY TL+H+    G  D   K
Sbjct: 714 LSNNIVYNIAIDGLCKSGKLDEARSVLSVLMSRGFLPDNFTYCTLIHACSVSGNVDEAFK 773

Query: 349 ILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           + D M E    P +  YN LINGLCK G +DRA   F ++  K   P+ VTYN ++G  C
Sbjct: 774 LRDEMLEKGLIPNITIYNALINGLCKLGNIDRAQRLFYKLYQKGLVPNAVTYNILIGCYC 833

Query: 409 KEGMLNEALQL 419
           + G L++A +L
Sbjct: 834 RIGDLDKASRL 844


>gi|255660996|gb|ACU25667.1| pentatricopeptide repeat-containing protein [Junellia uniflora]
          Length = 376

 Score =  188 bits (477), Expect = 7e-45,   Method: Compositional matrix adjust.
 Identities = 108/365 (29%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I+ A +V + +V+S   PD++ YN M+ G  +  +I+    L + M   G    V ++N 
Sbjct: 6   IDGAERVYKEIVLSKVSPDSVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNI 64

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++R +FDNGK  + I  W+   + G     IT+ IL+   CK   I +++ VL+    +G
Sbjct: 65  MMRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEMAEQKG 124

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D   Y++++N  CK+   D AV V+N ++  G +PN+  YNTL++ L     ++   
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAI 184

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M     SPT+ TYN LINGLCK  +   A N   +++ K   P ++TY+ ++  L
Sbjct: 185 RVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGL 244

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C +  +  ALQL + +      P +  +N LI GL   G M+ A+ LY  M     +P+ 
Sbjct: 245 CLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQLALSLYFDMNRWKCAPNL 304

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           ++H TL+ GF +   +  A+ +   I + G +    +Y + + GLC   ++  AI  L  
Sbjct: 305 VSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHD 364

Query: 528 MISSR 532
            ++ +
Sbjct: 365 AVTKK 369



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 190/365 (52%), Gaps = 1/365 (0%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  G +  A ++   +      PD      ++ G  R+ +I+   ++ ++M  S G    
Sbjct: 1   CESGDIDGAERVYKEIVLSKVSPDSVVYNAMLNGYFRVAKIKDCFELWEMM-GSEGNRSV 59

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            ++N+M+ GL   G++   I++ + M  SG   D IT+  ++     NG   +++   + 
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEM 119

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
             +KG       Y+ +I  +CK+  + +A+ VL+ M   GC P+   YN+L+N      K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           ++DA+ V   + +    P  ITYNTL++ L     +     ++  + +   +P V TY++
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSM 239

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           L+ GLC    V+RA+  +NQ+ SK  +PD+  +N ++  LC  G +  AL L   +N   
Sbjct: 240 LMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQLALSLYFDMNRWK 299

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C+P L+++NTL++G  K G +  A+V++ +++ NG+ PD I++   + G C  +++ +A+
Sbjct: 300 CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAI 359

Query: 488 DLLKE 492
             L +
Sbjct: 360 LFLHD 364



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 90/367 (24%), Positives = 165/367 (44%), Gaps = 36/367 (9%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C+ G I  A  +  E+ +S   PD + YN +L   F   K K     W            
Sbjct: 1   CESGDIDGAERVYKEIVLSKVSPDSVVYNAMLNGYFRVAKIKDCFELW------------ 48

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                  + M  EG +  + ++N ++      GK D+ + +   
Sbjct: 49  -----------------------EMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVISIWEL 84

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G   +SIT+  L+H     G  +    +L++  +       F Y+ +INGLCK   
Sbjct: 85  MKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEAN 144

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +D+A++  N M+   C+P+   YNT++  L       +A+++   +    CSP +ITYNT
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+GL K     +A  L  ++++ G++P  IT+  L+ G C   +VE A+ L  ++  +G
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKG 264

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K     + ++IHGLC   ++ +A+ +   M   +  P+    +T+++    DG    A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGEMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 558 KLWQKLI 564
            +W +++
Sbjct: 325 VIWARIL 331



 Score =  135 bits (341), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 85/300 (28%), Positives = 149/300 (49%), Gaps = 1/300 (0%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   I  A  V  ++ +   SPD V YN+++N   +  K  D   +   + S G    S
Sbjct: 1   CESGDIDGAERVYKEIVLSKVSPDSVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
            ++N ++  L   G  D V  I ++M ++       T+ IL++G CK G ++++++    
Sbjct: 61  -SFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITFGILVHGFCKNGYINKSLHVLEM 119

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
              K    D   Y+ ++  LCKE  L++A+ +L+ +  S C P    YNTLI+GL     
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            E A+ ++ +M     SP  IT+ TLI G C+ +   EA +L+KE+  +G       Y +
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSM 239

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           ++ GLC   KV+ A+Q+   + S  +KPD  + + ++  +   G  + A  L+  +  WK
Sbjct: 240 LMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQLALSLYFDMNRWK 299



 Score =  123 bits (308), Expect = 3e-25,   Method: Compositional matrix adjust.
 Identities = 84/310 (27%), Positives = 144/310 (46%), Gaps = 36/310 (11%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           FVE D  T   ++  FC  G +  +  ++++  ++  + D      +I GL +   ++KA
Sbjct: 90  FVE-DSITFGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKA 148

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             VL  M+ SG  P+   YN ++ GL    +   AI +  EM    C P +ITYNT++  
Sbjct: 149 VSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLING 208

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  N  F +A    K+ L KG  P +ITY++L++ +C    + RA+++ + +  +G  PD
Sbjct: 209 LCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPD 268

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +  +N L++  C  G+   A+ +  ++      PN +++NTL+      G         D
Sbjct: 269 VQMHNILIHGLCSVGEMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDG---------D 319

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           I N       V    IL NGL                     +PDI++YN  L  LC   
Sbjct: 320 IRN-----ALVIWARILRNGL---------------------EPDIISYNITLKGLCSCN 353

Query: 412 MLNEALQLLH 421
            +++A+  LH
Sbjct: 354 RISDAILFLH 363



 Score = 85.5 bits (210), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 102/209 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++       K  DA ++   M   +  P       LI GL + +   +A  +++ ++ 
Sbjct: 168 NTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLD 227

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  ITY+M++ GLC   ++  A+ L ++++  G +PDV  +N ++  +   G+ + 
Sbjct: 228 KGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMHNILIHGLCSVGEMQL 287

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  + D  R  C P L+++  L+E   K   I  A+ +   +   G  PDI++YN  + 
Sbjct: 288 ALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLK 347

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
             C   +  DA+L +++ +++ +    IT
Sbjct: 348 GLCSCNRISDAILFLHDAVTKKIVLTKIT 376


>gi|302811221|ref|XP_002987300.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
 gi|300144935|gb|EFJ11615.1| hypothetical protein SELMODRAFT_125836 [Selaginella moellendorffii]
          Length = 511

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 118/397 (29%), Positives = 205/397 (51%), Gaps = 15/397 (3%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCI--NLIRGLIRIDRIE 169
           FV+ D  T N +L   C  G++ +A + +    R  + P  H  +   LI GL ++ + +
Sbjct: 74  FVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGLCKVGKYD 133

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A  V + M +    P +++YN+++    KRG+  +A+ L  EM V    PD+ T+NT++
Sbjct: 134 HAMAVFRKMKL----PSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIFTFNTVI 189

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
           +++   GKFK+A+    + +   C P  +T+ +L+  +CK      A  VL+ M   GC 
Sbjct: 190 QSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVMDRVGCV 249

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGM---EPNSITYNTLLHSLGSRGCWDAV 346
           PD+V   +L++   K+G+ DDA  +   +LS G    +PN  T+N ++H L         
Sbjct: 250 PDVVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGLCKANKVGEA 309

Query: 347 DKILDIM-NEASHSPTVFTYNILINGLCKYGLVDRAINS-FNQMVSKNCQPDIVTYNTVL 404
           D ++  M +E   +P  FT+N +I+G  K G    A    F +M    C PD VT+  ++
Sbjct: 310 DALVRRMEDECGVAPDEFTFNTIIDGHFKAGDSKGAFKQLFQEMSRFGCHPDSVTFTILV 369

Query: 405 GALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLIDGLAKKGCMEKAMV-LYGQMME- 460
              CK+  ++EAL+L+  +  N   C+P  +++N L+  L   G +E+A+   +G+M E 
Sbjct: 370 SESCKQRRIHEALELVEQMTKNKGGCAPDTLSFNALLGCLCCDGRLEEAVAKFWGEMRER 429

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
               PD +TH  L+   C+   +E A  ++ E+  RG
Sbjct: 430 RECWPDAVTHALLVRQCCKQRNIELACRIVDEMLHRG 466



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 121/491 (24%), Positives = 229/491 (46%), Gaps = 51/491 (10%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D KT N ++ + C  G + DA++L+  M  +   PD   C +L+ GL +++++E A K+ 
Sbjct: 8   DVKTCNIVVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLY 67

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEP--DVITYNTILRTMF 233
           + M  S    D  TYN+++ GLCK G+I+ A   L         P    + Y  ++  + 
Sbjct: 68  EKMSRSFVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGLC 127

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
             GK+  A+  +    RK   P  ++Y I+I    K+     A+E+  +M ++   PDI 
Sbjct: 128 KVGKYDHAMAVF----RKMKLPSSMSYNIVIAACVKRGRNEAAVELFREMKVKKRVPDIF 183

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T+N+++    K GK+ +A+ +++ ++     PN +T+  L+H L         + +L++M
Sbjct: 184 TFNTVIQSLSKAGKFKEALDIVDEMVWLQCSPNELTFGLLVHGLCKAKRALEAESVLEVM 243

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVS---KNCQPDIVTYNTVLGALCKE 410
           +     P V     LI+G  K G VD A   F +M+S   +  +P++ T+N ++  LCK 
Sbjct: 244 DRVGCVPDVVLLTALISGHLKEGRVDDASRLFERMLSGGQRWSKPNLRTFNIMIHGLCKA 303

Query: 411 GMLNEALQLLHLLNGS-SCSPCLITYNTLIDGLAKKGCMEKAM-VLYGQMMENGISPDDI 468
             + EA  L+  +      +P   T+NT+IDG  K G  + A   L+ +M   G  PD +
Sbjct: 304 NKVGEADALVRRMEDECGVAPDEFTFNTIIDGHFKAGDSKGAFKQLFQEMSRFGCHPDSV 363

Query: 469 THRTLIWGFCRADQVEEAVDLLKE-------------------------------IGKRG 497
           T   L+   C+  ++ EA++L+++                               + K  
Sbjct: 364 TFTILVSESCKQRRIHEALELVEQMTKNKGGCAPDTLSFNALLGCLCCDGRLEEAVAKFW 423

Query: 498 NKMRNS--------AYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            +MR           + L++   CK + +++A ++++ M+   + P   + S +V  +  
Sbjct: 424 GEMRERRECWPDAVTHALLVRQCCKQRNIELACRIVDEMLHRGFVPTPGIASMLVNLI-Q 482

Query: 550 DGMTEEAYKLW 560
            G  +  ++ W
Sbjct: 483 SGSDDARHRQW 493



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 88/170 (51%), Gaps = 6/170 (3%)

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D+ T N V+ +LCK G++++A +L+H +      P  +T N+L+DGL K   +E AM LY
Sbjct: 8   DVKTCNIVVDSLCKGGLVDDAAELVHGMMDKGPYPDTVTCNSLLDGLFKVNKVEHAMKLY 67

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK-EIGKRGNKMRNS-AYRLVIHGLC 513
            +M  + +  D  T+  L+ G C+  +++EA   L   +  R   +R+   Y  +I GLC
Sbjct: 68  EKMSRSFVKADAFTYNILLHGLCKGGRIQEACQKLSAALRDREAPVRHELLYEALIGGLC 127

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           K  K D A+ V   M      P    ++ ++      G  E A +L++++
Sbjct: 128 KVGKYDHAMAVFRKM----KLPSSMSYNIVIAACVKRGRNEAAVELFREM 173


>gi|222628656|gb|EEE60788.1| hypothetical protein OsJ_14372 [Oryza sativa Japonica Group]
          Length = 748

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 116/449 (25%), Positives = 230/449 (51%), Gaps = 1/449 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  F   G++  A +L   M  ++  PD     +LI GL +   + K+ +VL+ MV 
Sbjct: 161 NTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVD 220

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P+  TYN ++ G    G  + ++ +  EMS SG  P V+  N+ +  +  + + K+
Sbjct: 221 AGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKE 280

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   +   + KG  P +I+Y+ L+     +   A    +++ M  +G  P+   +N L+N
Sbjct: 281 AKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILIN 340

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              + G  D A+L+  ++ ++GM P+++T+ T++ SL   G  D      + M +    P
Sbjct: 341 AYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPP 400

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY-NTVLGALCKEGMLNEALQL 419
           +   Y  LI G C +G + +A    ++M++K+  P  V Y ++++  L KEG + E   +
Sbjct: 401 SEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDI 460

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           + L+  +   P ++T+N+L++G    G ME+A  L   M   GI P+   + TL+ G+C+
Sbjct: 461 MDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCK 520

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
             ++++A+ + +++  +G K  +  Y +++HGL ++++   A ++   MI S        
Sbjct: 521 NGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQT 580

Query: 540 FSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +  ++  +  +  T+EA  L +KL    V
Sbjct: 581 YGVVLGGLCRNNCTDEANMLLEKLFAMNV 609



 Score =  184 bits (468), Expect = 9e-44,   Method: Compositional matrix adjust.
 Identities = 109/427 (25%), Positives = 215/427 (50%), Gaps = 6/427 (1%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD      LI G  +   ++KA ++   M+     PD +TYN ++ GLCK  ++  +  +
Sbjct: 155 PDVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERV 214

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L++M  +G  P+  TYN+++      G +K+++  +K+    G  P ++     I  +C+
Sbjct: 215 LEQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCR 274

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
              I  A ++ D M ++G  P+I++Y++L++    +G + +   ++N ++S+G+ PN   
Sbjct: 275 HNRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRF 334

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           +N L+++    G  D    I + M      P   T+  +I+ LC+ G +D A++ FN MV
Sbjct: 335 FNILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMV 394

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLL-HLLNGSSCSPCLITYNTLIDGLAKKGCM 448
                P    Y  ++   C  G L +A +L+  ++N     P +  ++++I+ L K+G +
Sbjct: 395 DIGVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRV 454

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +   +   M++ G  P+ +T  +L+ G+C    +EEA  LL  +   G +     Y  +
Sbjct: 455 AEGKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTL 514

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + G CK+ ++D A+ V   M+    KP   +++ I+  +     T  A K++ ++I    
Sbjct: 515 VDGYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMI---- 570

Query: 569 FEKGTTL 575
            E GTT+
Sbjct: 571 -ESGTTV 576



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 201/438 (45%), Gaps = 1/438 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           +L  + + G   + + L+++M  +  +P+  F   LI    R   ++KA  + + M   G
Sbjct: 303 LLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKG 362

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            +PDT+T+  ++  LC+ G++  A+   + M   G  P    Y  +++   ++G+  +A 
Sbjct: 363 MIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAK 422

Query: 243 GFWKDQLRKGCPPYLITY-TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
               + + K  PP  + Y + +I  + K+  +A   +++D M   G  P++VT+NSL+  
Sbjct: 423 ELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEG 482

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C  G  ++A  +++ + S G+EPN   Y TL+      G  D    +   M      PT
Sbjct: 483 YCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPT 542

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
              YNI+++GL +      A   F++M+       I TY  VLG LC+    +EA  LL 
Sbjct: 543 SVLYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLE 602

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L   +    +IT+N +I  + K G  ++A  L+  +   G+ P   T+  +I    + +
Sbjct: 603 KLFAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEE 662

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
             EEA +L   + K G    +     ++  L K  +V  A   L ++  +    + +  S
Sbjct: 663 SYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKKAEVAKASNYLSIIDENNLTLEASTIS 722

Query: 542 TIVKKVADDGMTEEAYKL 559
            +    + +G   E  KL
Sbjct: 723 LLASLFSREGKCREHIKL 740



 Score =  163 bits (412), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 111/405 (27%), Positives = 192/405 (47%), Gaps = 2/405 (0%)

Query: 123 ILQNFCSRGKLTDASKLI-DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           IL N  +R  + D + LI + M  +  IPD      +I  L RI R++ A      MV  
Sbjct: 337 ILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDI 396

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY-NTILRTMFDNGKFKQ 240
           G  P    Y  ++ G C  G++  A  L+ EM      P  + Y ++I+  +F  G+  +
Sbjct: 397 GVPPSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAE 456

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                   ++ G  P ++T+  L+E  C    +  A  +LD MA  G  P+   Y +LV+
Sbjct: 457 GKDIMDLMVQTGQRPNVVTFNSLMEGYCLVGNMEEAFALLDAMASIGIEPNCYIYGTLVD 516

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+ DDA+ V  ++L +G++P S+ YN +LH L       A  K+   M E+  + 
Sbjct: 517 GYCKNGRIDDALTVFRDMLHKGVKPTSVLYNIILHGLFQARRTTAAKKMFHEMIESGTTV 576

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           ++ TY +++ GLC+    D A     ++ + N + DI+T+N V+ A+ K G   EA +L 
Sbjct: 577 SIQTYGVVLGGLCRNNCTDEANMLLEKLFAMNVKFDIITFNIVISAMLKVGRRQEAKELF 636

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             ++     P + TYN +I  L K+   E+A  L+  + ++G +PD      ++    + 
Sbjct: 637 AAISTYGLVPTVHTYNLMISNLIKEESYEEADNLFISVEKSGRAPDSRLLNHIVRMLLKK 696

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
            +V +A + L  I +    +  S   L+     +  K    I++L
Sbjct: 697 AEVAKASNYLSIIDENNLTLEASTISLLASLFSREGKCREHIKLL 741



 Score =  161 bits (407), Expect = 9e-37,   Method: Compositional matrix adjust.
 Identities = 96/367 (26%), Positives = 178/367 (48%), Gaps = 7/367 (1%)

Query: 206 AIALLDEMSVSGC------EPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLIT 259
           A+ L   M    C       P + TYN ++       + + A+  +   LR G  P + +
Sbjct: 100 AVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGPDVCS 159

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           Y  LI+   K+  + +A E+   M  +  SPD+VTYNSL++  CK  +   +  V+  ++
Sbjct: 160 YNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMV 219

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
             G+ PN+ TYN+L++   + G W    ++   M+ +   P V   N  I+ LC++  + 
Sbjct: 220 DAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIK 279

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
            A + F+ MV K  +P+I++Y+T+L     EG       L++L+      P    +N LI
Sbjct: 280 EAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILI 339

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
           +  A+ G M+KAM+++  M   G+ PD +T  T+I   CR  ++++A+     +   G  
Sbjct: 340 NAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVP 399

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT-VFSTIVKKVADDGMTEEAYK 558
              + YR +I G C   ++  A +++  M++    P     FS+I+  +  +G   E   
Sbjct: 400 PSEAVYRCLIQGCCNHGELVKAKELISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKD 459

Query: 559 LWQKLIE 565
           +   +++
Sbjct: 460 IMDLMVQ 466



 Score =  152 bits (384), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 108/487 (22%), Positives = 220/487 (45%), Gaps = 3/487 (0%)

Query: 77  EWSSESHVLAVNKKLRGLTITKK--SHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLT 134
           E S    V+  N  + GL  TK+    +  L       +  + KT N ++  + + G   
Sbjct: 185 EQSVSPDVVTYNSLIDGLCKTKEMVKSERVLEQMVDAGIRPNNKTYNSLIYGYSTAGMWK 244

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMV 194
           ++ ++   M+    IP    C + I  L R +RI++A  +   MV+ G  P+ I+Y+ ++
Sbjct: 245 ESVRVFKEMSSSGLIPCVVNCNSFIHALCRHNRIKEAKDIFDSMVLKGPKPNIISYSTLL 304

Query: 195 GGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCP 254
            G    G   +  +L++ M   G  P+   +N ++      G   +A+  ++D   KG  
Sbjct: 305 HGYAAEGCFANMNSLVNLMVSKGIVPNHRFFNILINAYARCGMMDKAMLIFEDMQNKGMI 364

Query: 255 PYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLV 314
           P  +T+  +I  +C+   +  A+   + M   G  P    Y  L+   C  G+   A  +
Sbjct: 365 PDTVTFATVISSLCRIGRLDDALHKFNHMVDIGVPPSEAVYRCLIQGCCNHGELVKAKEL 424

Query: 315 INNLLSRGMEPNSITY-NTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           I+ ++++ + P  + Y ++++++L   G       I+D+M +    P V T+N L+ G C
Sbjct: 425 ISEMMNKDIPPPGVKYFSSIINNLFKEGRVAEGKDIMDLMVQTGQRPNVVTFNSLMEGYC 484

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
             G ++ A    + M S   +P+   Y T++   CK G +++AL +   +      P  +
Sbjct: 485 LVGNMEEAFALLDAMASIGIEPNCYIYGTLVDGYCKNGRIDDALTVFRDMLHKGVKPTSV 544

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            YN ++ GL +      A  ++ +M+E+G +    T+  ++ G CR +  +EA  LL+++
Sbjct: 545 LYNIILHGLFQARRTTAAKKMFHEMIESGTTVSIQTYGVVLGGLCRNNCTDEANMLLEKL 604

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
                K     + +VI  + K  +   A ++   + +    P    ++ ++  +  +   
Sbjct: 605 FAMNVKFDIITFNIVISAMLKVGRRQEAKELFAAISTYGLVPTVHTYNLMISNLIKEESY 664

Query: 554 EEAYKLW 560
           EEA  L+
Sbjct: 665 EEADNLF 671



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 77/303 (25%), Positives = 145/303 (47%), Gaps = 6/303 (1%)

Query: 272 GIARAIEVLDDMAIEGC------SPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEP 325
           G A A+E+   M    C      +P I TYN L++   +  + + A+ V   LL  G+ P
Sbjct: 96  GPALAVELFKRMDRWACPHAAADAPTIYTYNILIDCYRRMHRPELALAVFGRLLRTGLGP 155

Query: 326 NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSF 385
           +  +YNTL+      G  D   ++   M E S SP V TYN LI+GLCK   + ++    
Sbjct: 156 DVCSYNTLIDGFSKEGEVDKAYELFYKMIEQSVSPDVVTYNSLIDGLCKTKEMVKSERVL 215

Query: 386 NQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
            QMV    +P+  TYN+++      GM  E++++   ++ S   PC++  N+ I  L + 
Sbjct: 216 EQMVDAGIRPNNKTYNSLIYGYSTAGMWKESVRVFKEMSSSGLIPCVVNCNSFIHALCRH 275

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             +++A  ++  M+  G  P+ I++ TL+ G+           L+  +  +G    +  +
Sbjct: 276 NRIKEAKDIFDSMVLKGPKPNIISYSTLLHGYAAEGCFANMNSLVNLMVSKGIVPNHRFF 335

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            ++I+   +   +D A+ + E M +    PD   F+T++  +   G  ++A   +  +++
Sbjct: 336 NILINAYARCGMMDKAMLIFEDMQNKGMIPDTVTFATVISSLCRIGRLDDALHKFNHMVD 395

Query: 566 WKV 568
             V
Sbjct: 396 IGV 398


>gi|302816356|ref|XP_002989857.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
 gi|300142423|gb|EFJ09124.1| hypothetical protein SELMODRAFT_45144 [Selaginella moellendorffii]
          Length = 394

 Score =  188 bits (477), Expect = 8e-45,   Method: Compositional matrix adjust.
 Identities = 107/373 (28%), Positives = 194/373 (52%), Gaps = 3/373 (0%)

Query: 157 NLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS 216
           +LIR L  ++   KA ++   M+     PD   Y +++G LCK  ++  A +  ++M  S
Sbjct: 19  SLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLCKINKLDLAASYFEQMVQS 78

Query: 217 GCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARA 276
           GC PD +TY  ++ ++F   K++Q    +++ L KG  P L+TY  ++   CK   I +A
Sbjct: 79  GCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQA 138

Query: 277 IEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           + ++  +   G SP    Y++L++  CK  ++++A  +    ++ G   + I Y + +  
Sbjct: 139 LSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFE--MAAGDVQDVIVYTSFISG 196

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           L   G  D    +   M EA  +P   +YN++I  LCK   V  A    +Q + + C P 
Sbjct: 197 LCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPG 256

Query: 397 IVTYNTVLGALCKEGMLNEALQLLH-LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           +     ++  LCK   + EA  +L  +L     +P ++TY+ +IDGL K   ++ A ++ 
Sbjct: 257 VPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVL 316

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M   G  PD +T+  +I  FC+  +++EA +L + + +RG      AY ++I G C++
Sbjct: 317 QKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRA 376

Query: 516 KKVDMAIQVLELM 528
            KVD AI ++E M
Sbjct: 377 AKVDEAIAMIEEM 389



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 102/358 (28%), Positives = 179/358 (50%), Gaps = 3/358 (0%)

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           LL EM  +G  P ++T+ +++R + +     +A+  +   +     P    YT++I  +C
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   +  A    + M   GC PD VTY  LV+   K  K++    +   +LS+G  P  +
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           TY T+++     G  D    ++  +     SP+   Y+ LI+GLCK+   + A   F +M
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EM 179

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
            + + Q D++ Y + +  LCK G L+EA  +   +  + C+P  ++YN +I  L K   +
Sbjct: 180 AAGDVQ-DVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRL 507
            +A  L  Q ME    P       L+ G C++ +VEEA  +L+ + + G++  +   Y  
Sbjct: 239 SEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSA 298

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           VI GLCK+ ++D A  VL+ M  +   PD   ++ I+      G  +EA +L+Q++ E
Sbjct: 299 VIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHE 356



 Score =  128 bits (321), Expect = 9e-27,   Method: Compositional matrix adjust.
 Identities = 76/311 (24%), Positives = 145/311 (46%), Gaps = 3/311 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D+ T   ++ +     K     ++ + M  +   P+      ++ G  +  RI++A  ++
Sbjct: 83  DKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELVTYATVVNGYCKAGRIDQALSLM 142

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + +  +G  P    Y+ ++ GLCK  +   A  L  EM+ +G   DVI Y + +  +   
Sbjct: 143 RRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELF-EMA-AGDVQDVIVYTSFISGLCKA 200

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           GK  +A       +  GC P  ++Y ++I  +CK   ++ A E++D      C P +   
Sbjct: 201 GKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVC 260

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRG-MEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
             LV+  CK  + ++A +++  +L  G   P+ +TY+ ++  L      D    +L  M 
Sbjct: 261 TVLVDGLCKSRRVEEACVILERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMR 320

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
            A   P V TY  +I+  CK G +D A   F +M  + C  D+V YN ++   C+   ++
Sbjct: 321 RAGCVPDVVTYTAIIDAFCKVGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVD 380

Query: 415 EALQLLHLLNG 425
           EA+ ++  + G
Sbjct: 381 EAIAMIEEMAG 391



 Score =  120 bits (300), Expect = 2e-24,   Method: Compositional matrix adjust.
 Identities = 75/254 (29%), Positives = 123/254 (48%), Gaps = 2/254 (0%)

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           ++  + + G+ P  +T+ +L+  L      +   +I   M +    P  F Y ++I  LC
Sbjct: 1   LLGEMKAAGITPTIVTFGSLIRKLCELNFTNKALQIFHQMIDMKVKPDAFLYTVVIGHLC 60

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
           K   +D A + F QMV   C PD VTY  ++ +L K     +  Q+   +     SP L+
Sbjct: 61  KINKLDLAASYFEQMVQSGCLPDKVTYTVLVHSLFKACKWEQGHQIFEEMLSKGHSPELV 120

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TY T+++G  K G +++A+ L  ++   G SP    + TLI G C+ D+ EEA +L +  
Sbjct: 121 TYATVVNGYCKAGRIDQALSLMRRLKGTGRSPSGSLYSTLIDGLCKHDRHEEARELFEMA 180

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
              G+      Y   I GLCK+ K+D A  V   MI +   PD   ++ I+  +  D   
Sbjct: 181 A--GDVQDVIVYTSFISGLCKAGKLDEAKAVHVKMIEAGCAPDPVSYNVIIYSLCKDNRV 238

Query: 554 EEAYKLWQKLIEWK 567
            EA +L  + +E K
Sbjct: 239 SEAKELMDQAMERK 252



 Score =  100 bits (250), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 51/173 (29%), Positives = 93/173 (53%), Gaps = 1/173 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + N I+ + C   ++++A +L+D    R  +P    C  L+ GL +  R+E+A  +L
Sbjct: 221 DPVSYNVIIYSLCKDNRVSEAKELMDQAMERKCMPGVPVCTVLVDGLCKSRRVEEACVIL 280

Query: 176 QIMVMSGG-VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           + M+ +G   P  +TY+ ++ GLCK  ++  A  +L +M  +GC PDV+TY  I+     
Sbjct: 281 ERMLEAGDRAPSVVTYSAVIDGLCKADRLDDAYIVLQKMRRAGCVPDVVTYTAIIDAFCK 340

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
            G+  +A   ++    +GC   ++ Y ILI   C+   +  AI ++++MA  G
Sbjct: 341 VGRLDEARELFQRMHERGCASDVVAYNILIRGYCRAAKVDEAIAMIEEMAGRG 393


>gi|388513011|gb|AFK44567.1| unknown [Medicago truncatula]
          Length = 348

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 103/336 (30%), Positives = 183/336 (54%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI+GL    +I +A      +V  G   D ++Y  ++ GLCK G+ R+A+ LL  +    
Sbjct: 13  LIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDLLQRVDGKL 72

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            + + + YNT++  M  +     A   + + + KG  P ++TY+ LI        +  AI
Sbjct: 73  VQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFVVGKLKDAI 132

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++ + + +E   PD  T+N LV+  CK  K  +   V   ++ +G+ P+ +TYN+L+   
Sbjct: 133 DLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVTYNSLVDGY 192

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                 +    I + M +   +P + +YNILING CK   VD+A+N FN+M  KN  P++
Sbjct: 193 RLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMHCKNIIPNV 252

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           VTYN+++  L K G ++ ALQL+  ++     P ++TYN++ID L K   ++KA+ L  +
Sbjct: 253 VTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVDKAIALITK 312

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
             + GI P   T+  LI G C+  ++++A ++ +++
Sbjct: 313 FKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score =  169 bits (427), Expect = 4e-39,   Method: Compositional matrix adjust.
 Identities = 96/342 (28%), Positives = 178/342 (52%)

Query: 185 PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGF 244
           P+TIT N ++ GLC +GQI  A    D++   G   D ++Y T++  +   G+ + A+  
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64

Query: 245 WKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCK 304
            +    K      + Y  +I  +CK   +  A ++  +M  +G SP++VTY++L++    
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFT 364
            GK  DA+ + N ++   ++P+  T+N L+              +  +M +    P V T
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184

Query: 365 YNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLN 424
           YN L++G      V+ A + FN M      PDI +YN ++   CK   +++A+ L + ++
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 244

Query: 425 GSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVE 484
             +  P ++TYN+LIDGL+K G +  A+ L  QM + G+ P+ +T+ ++I    +  QV+
Sbjct: 245 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVD 304

Query: 485 EAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
           +A+ L+ +   +G +     Y ++I GLCK  ++  A  + E
Sbjct: 305 KAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFE 346



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 100/340 (29%), Positives = 165/340 (48%), Gaps = 14/340 (4%)

Query: 119 TNNKILQNFCSRGKLTDA----SKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV 174
           T N +++  C +G++  A     KL+ +    +Q+        LI GL ++     A  +
Sbjct: 9   TLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVS----YGTLIHGLCKVGETRAALDL 64

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           LQ +       + + YN ++ G+CK   +  A  L  EM   G  P+V+TY+ ++   F 
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            GK K AI  +   + +   P   T+ IL++  CK   +     V   M  +G  PD+VT
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YNSLV+      + + A  + N +   G+ P+  +YN L++          VDK +++ N
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCK---IKKVDKAMNLFN 241

Query: 355 EASHS---PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           E       P V TYN LI+GL K G +  A+   +QM  +   P+I+TYN+++ AL K  
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTH 301

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
            +++A+ L+         P + TY  LIDGL K G ++ A
Sbjct: 302 QVDKAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDA 341



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 74/277 (26%), Positives = 140/277 (50%)

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G  P+ +T N+L+   C +G+   A L  + L++ G   + ++Y TL+H L   G   A 
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             +L  ++          YN +I G+CK   V+ A + +++MVSK   P++VTY+ ++  
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISG 121

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
               G L +A+ L + +   +  P   T+N L+DG  K   M++   ++  MM+ GI PD
Sbjct: 122 FFVVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPD 181

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            +T+ +L+ G+    +V  A  +   + + G      +Y ++I+G CK KKVD A+ +  
Sbjct: 182 VVTYNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFN 241

Query: 527 LMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            M      P+   +++++  ++  G    A +L  ++
Sbjct: 242 EMHCKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQM 278



 Score =  127 bits (318), Expect = 2e-26,   Method: Compositional matrix adjust.
 Identities = 75/284 (26%), Positives = 138/284 (48%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L   DG  V+ +    N ++   C    + DA  L   M  +   P+      LI G   
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           + +++ A  +   +++    PD  T+N++V G CK  +++    +   M   G  PDV+T
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGIIPDVVT 184

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN+++       +   A   +    + G  P + +Y ILI   CK   + +A+ + ++M 
Sbjct: 185 YNSLVDGYRLVKEVNTAKSIFNTMAQGGVNPDIRSYNILINGFCKIKKVDKAMNLFNEMH 244

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            +   P++VTYNSL++   K G+   A+ +++ +  RG+ PN +TYN+++ +L      D
Sbjct: 245 CKNIIPNVVTYNSLIDGLSKSGRISYALQLVDQMHDRGVPPNILTYNSIIDALFKTHQVD 304

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
               ++    +    P+++TY ILI+GLCK G +  A N F  +
Sbjct: 305 KAIALITKFKDQGIQPSMYTYTILIDGLCKGGRLKDARNIFEDL 348



 Score = 79.7 bits (195), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 43/146 (29%), Positives = 75/146 (51%)

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P  IT NTLI GL  KG + +A + + +++  G   D +++ TLI G C+  +   A+DL
Sbjct: 5   PNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALDL 64

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L+ +  +  ++    Y  VI+G+CK K V+ A  +   M+S    P+   +S ++     
Sbjct: 65  LQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFFV 124

Query: 550 DGMTEEAYKLWQKLIEWKVFEKGTTL 575
            G  ++A  L+ K+I   +   G T 
Sbjct: 125 VGKLKDAIDLFNKIILENIKPDGYTF 150



 Score = 67.4 bits (163), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 43/175 (24%), Positives = 79/175 (45%)

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
            P+ +T NT++  LC +G +++A      L         ++Y TLI GL K G    A+ 
Sbjct: 4   HPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAALD 63

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L  ++    +  + + + T+I+G C+   V +A DL  E+  +G       Y  +I G  
Sbjct: 64  LLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVSKGISPNVVTYSALISGFF 123

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              K+  AI +   +I    KPD   F+ +V     D   +E   ++  +++  +
Sbjct: 124 VVGKLKDAIDLFNKIILENIKPDGYTFNILVDGFCKDRKMKEGKTVFAMMMKQGI 178



 Score = 50.1 bits (118), Expect = 0.004,   Method: Compositional matrix adjust.
 Identities = 25/104 (24%), Positives = 52/104 (50%)

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G  P+ IT  TLI G C   Q+ +A     ++   G  +   +Y  +IHGLCK  +   A
Sbjct: 2   GYHPNTITLNTLIKGLCLKGQIHQAFLFHDKLVALGFHLDQVSYGTLIHGLCKVGETRAA 61

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           + +L+ +     + +  +++T++  +  D    +A+ L+ +++ 
Sbjct: 62  LDLLQRVDGKLVQLNAVMYNTVIYGMCKDKHVNDAFDLYSEMVS 105


>gi|255661016|gb|ACU25677.1| pentatricopeptide repeat-containing protein [Neosparton
           ephedroides]
          Length = 367

 Score =  188 bits (477), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 110/364 (30%), Positives = 186/364 (51%), Gaps = 37/364 (10%)

Query: 164 RIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVI 223
            I  I+ A +V + +V S   PD + YN M+ G  + G+I+    L + M   G    V 
Sbjct: 2   EIGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDCFELWELMGREGSRS-VS 60

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
           ++N + R +FBNGK  + I  W+     G     ITY IL+   CK   + ++I VL+  
Sbjct: 61  SFNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEIA 120

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
             +G   D   Y++++N  CK+ K D AV V+N ++  G +PN+  YN L++ L     +
Sbjct: 121 ERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALINGLVGASKF 180

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCK-------------------------YGL- 377
           +   ++L  M     SPTV TY+ JINGLCK                         Y L 
Sbjct: 181 EDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLL 240

Query: 378 ---------VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
                    VD+A+  +NQ++SK  +PD+  +N ++  LC  G +  AL  L+ +N   C
Sbjct: 241 IKGLCLDRKVDKALQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALS-LYYMNRWDC 299

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
           +P L+T+NTL++G  K G +  A+V++ +++ NG+ PD I++   + G C  +++  A+ 
Sbjct: 300 APNLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISGAIL 359

Query: 489 LLKE 492
            L++
Sbjct: 360 FLQD 363



 Score =  141 bits (355), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 82/301 (27%), Positives = 151/301 (50%), Gaps = 1/301 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N + +     GK+ +   + ++M     + D      L+ G  +   + K+  VL+I   
Sbjct: 63  NIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEIAER 122

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            GGV D   Y+ M+ GLCK  ++  A+++L+ M  +GC+P+   YN ++  +    KF+ 
Sbjct: 123 KGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALINGLVGASKFED 182

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           AI   ++       P ++TY+ JI  +CK      A +++ +M  +G +P ++TY+ L+ 
Sbjct: 183 AIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSLLIK 242

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C   K D A+ + N ++S+G +P+   +N ++H L S G        L  MN    +P
Sbjct: 243 GLCLDRKVDKALQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALS-LYYMNRWDCAP 301

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            + T+N L+ G  K G V  A+  + +++    QPDI++YN  L  LC    ++ A+  L
Sbjct: 302 NLVTHNTLMEGFYKDGDVRNALVIWARILRNGLQPDIISYNITLKGLCSCNRISGAILFL 361

Query: 421 H 421
            
Sbjct: 362 Q 362



 Score =  137 bits (345), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 85/293 (29%), Positives = 146/293 (49%), Gaps = 1/293 (0%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   I  A  V  ++     SPD V YN+++N   + G+  D    +  L+ R    + 
Sbjct: 1   CEIGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDC-FELWELMGREGSRSV 59

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
            ++N +   L   G  D V  I ++M E+ +     TY IL++G CK G ++++I+    
Sbjct: 60  SSFNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEI 119

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
              K    D   Y+ ++  LCKE  L++A+ +L+ +  + C P    YN LI+GL     
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALINGLVGASK 179

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            E A+ +  +M     SP  +T+  JI G C+ ++  EA DL+KE+  +G       Y L
Sbjct: 180 FEDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSL 239

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
           +I GLC  +KVD A+Q+   +IS  +KPD  + + ++  +   G  + A  L+
Sbjct: 240 LIKGLCLDRKVDKALQLWNQVISKGFKPDVQMHNIMIHGLCSVGKMQLALSLY 292



 Score =  112 bits (279), Expect = 6e-22,   Method: Compositional matrix adjust.
 Identities = 67/262 (25%), Positives = 129/262 (49%), Gaps = 1/262 (0%)

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           C+ G  D A  V   ++   + P+++ YN +L+     G      ++ ++M     S +V
Sbjct: 1   CEIGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDCFELWELMGREG-SRSV 59

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            ++NI+  GL   G VD  I+ +  M       D +TY  ++   CK G LN+++ +L +
Sbjct: 60  SSFNIMXRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEI 119

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
                       Y+ +I+GL K+  ++KA+ +   M++NG  P+   +  LI G   A +
Sbjct: 120 AERKGGVLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALINGLVGASK 179

Query: 483 VEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFST 542
            E+A+ +L+E+G          Y  +I+GLCK ++   A  +++ M+     P    +S 
Sbjct: 180 FEDAIRVLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLDKGLNPSVITYSL 239

Query: 543 IVKKVADDGMTEEAYKLWQKLI 564
           ++K +  D   ++A +LW ++I
Sbjct: 240 LIKGLCLDRKVDKALQLWNQVI 261



 Score = 80.9 bits (198), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 50/222 (22%), Positives = 103/222 (46%), Gaps = 1/222 (0%)

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           D  +++   + E+  SP    YN ++NG  + G +      + +++ +     + ++N +
Sbjct: 7   DGAERVYKEIVESKVSPDAVVYNAMLNGYFRVGRIKDCFELW-ELMGREGSRSVSSFNIM 65

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
              L   G ++E + +  L+  S      ITY  L+ G  K G + K++ +       G 
Sbjct: 66  XRGLFBNGKVDEVISIWELMKESGYVEDSITYGILVHGFCKNGYLNKSIHVLEIAERKGG 125

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
             D   +  +I G C+  ++++AV +L  + K G K     Y  +I+GL  + K + AI+
Sbjct: 126 VLDAFAYSAMINGLCKEAKLDKAVSVLNGMIKNGCKPNAHVYNALINGLVGASKFEDAIR 185

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           VL  M +  + P    +S J+  +       EAY L +++++
Sbjct: 186 VLREMGTXHFSPTVVTYSXJINGLCKGERFGEAYDLVKEMLD 227


>gi|357121540|ref|XP_003562477.1| PREDICTED: pentatricopeptide repeat-containing protein
           At2g32630-like [Brachypodium distachyon]
          Length = 556

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 107/377 (28%), Positives = 194/377 (51%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           ++ +++V G CK G +  A  LLDE+   G   +   YN++L +           G  K+
Sbjct: 149 LSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKE 208

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
              +G  P + TYTIL++ + +   I++   V D+M  +  + D+  Y++++N  C+ G 
Sbjct: 209 MENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGN 268

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
              A  V +  +  G+EPN  TY  L++     G  +A + +L  M           +N 
Sbjct: 269 VRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNT 328

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           +I+G C++G+V++A+     M     + DI TYNT+   LC+   + +A +LLH++    
Sbjct: 329 MIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKG 388

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
            +P  ++Y TLI   AK+G M +A  L+  M   G  P  +T+  +I G+ +   + EA 
Sbjct: 389 VAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAE 448

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
              KE+ K+G       Y  ++HG C + KVD+A+++ E M     KP+   ++ +V  +
Sbjct: 449 RFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGL 508

Query: 548 ADDGMTEEAYKLWQKLI 564
           A +G +EEA++L+  ++
Sbjct: 509 AKEGRSEEAFQLYDDML 525



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 107/393 (27%), Positives = 191/393 (48%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           ++ G  +   ++ A  +L  +   G   +   YN ++    ++    +   LL EM   G
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENRG 213

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            EP V TY  ++  +   G   +    + +  RK     +  Y+ +I   C+   + RA 
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRAS 273

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           EV D+    G  P+  TY +L+N  CK G+ + A +++ ++  RG+  N I +NT++   
Sbjct: 274 EVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGY 333

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
              G  +   +I  +M +      ++TYN L  GLC+   ++ A    + M  K   P+ 
Sbjct: 334 CRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNY 393

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
           V+Y T++    KEG + EA +L   + G    P ++TYN +IDG  K G + +A     +
Sbjct: 394 VSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKE 453

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
           M + G+ PD  T+  L+ G C   +V+ A+ L +E+  RG K    AY  ++ GL K  +
Sbjct: 454 MEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGR 513

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADD 550
            + A Q+ + M+++   PDDT++S +V  +  D
Sbjct: 514 SEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTD 546



 Score =  152 bits (385), Expect = 4e-34,   Method: Compositional matrix adjust.
 Identities = 95/354 (26%), Positives = 159/354 (44%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N +L ++  +      + L+  M  R   P       L+ GL R   I K   V   M  
Sbjct: 187 NSLLDSYTRQRNDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKR 246

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
                D   Y+ ++   C+ G +R A  + DE    G EP+  TY  ++      G+ + 
Sbjct: 247 KNVAGDVYFYSAVINAYCRGGNVRRASEVFDECVGHGVEPNERTYGALINGFCKIGQIEA 306

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     D   +G     I +  +I+  C+   + +A+E+   M   G   DI TYN+L  
Sbjct: 307 AEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKALEIKAVMEKMGIELDIYTYNTLAC 366

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             C+  + +DA  +++ +  +G+ PN ++Y TL+      G      ++   M      P
Sbjct: 367 GLCRVNRMEDAKKLLHIMAEKGVAPNYVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRP 426

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
           +V TYN++I+G  K G +  A     +M  K   PDI TY  ++   C  G ++ AL+L 
Sbjct: 427 SVVTYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLF 486

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
             +      P ++ Y  L+ GLAK+G  E+A  LY  M+  G++PDD  +  L+
Sbjct: 487 EEMKHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLV 540



 Score =  141 bits (356), Expect = 8e-31,   Method: Compositional matrix adjust.
 Identities = 103/398 (25%), Positives = 176/398 (44%), Gaps = 2/398 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMS 181
           ++  FC  G + DA  L+D + R   +     C N L+    R    +  + +L+ M   
Sbjct: 154 VVDGFCKSGSVDDAHGLLDELPRHG-VGLNACCYNSLLDSYTRQRNDDAVAGLLKEMENR 212

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
           G  P   TY ++V GL + G I    A+ DEM       DV  Y+ ++      G  ++A
Sbjct: 213 GVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRA 272

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
              + + +  G  P   TY  LI   CK   I  A  +L DM + G   + + +N++++ 
Sbjct: 273 SEVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDG 332

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            C+ G  + A+ +   +   G+E +  TYNTL   L      +   K+L IM E   +P 
Sbjct: 333 YCRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPN 392

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             +Y  LI+   K G +  A   F  M  K  +P +VTYN ++    K G + EA +   
Sbjct: 393 YVSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKK 452

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            +      P + TY  L+ G    G ++ A+ L+ +M   G  P+ + +  L+ G  +  
Sbjct: 453 EMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEG 512

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
           + EEA  L  ++   G    ++ Y +++  L    + D
Sbjct: 513 RSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSRKD 550



 Score =  140 bits (354), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 87/330 (26%), Positives = 156/330 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           VE    T   ++      G ++    + D M R+N   D +F   +I    R   + +AS
Sbjct: 214 VEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYSAVINAYCRGGNVRRAS 273

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V    V  G  P+  TY  ++ G CK GQI +A  LL +M + G   + I +NT++   
Sbjct: 274 EVFDECVGHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGY 333

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             +G  ++A+       + G    + TY  L   +C+   +  A ++L  MA +G +P+ 
Sbjct: 334 CRHGMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNY 393

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V+Y +L++   K+G   +A  +  ++  +G  P+ +TYN ++      G     ++    
Sbjct: 394 VSYTTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKE 453

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +    P ++TY  L++G C  G VD A+  F +M  +  +P++V Y  ++  L KEG 
Sbjct: 454 MEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGR 513

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             EA QL   +  +  +P    Y+ L+  L
Sbjct: 514 SEEAFQLYDDMLAAGLTPDDTLYSVLVGSL 543



 Score =  121 bits (303), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 79/267 (29%), Positives = 125/267 (46%), Gaps = 8/267 (2%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARR----NQIPDFHFCINLIRGLIRI 165
           G  VE +E+T   ++  FC  G++  A  L+  M  R    NQI        +I G  R 
Sbjct: 281 GHGVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQI----VFNTMIDGYCRH 336

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
             +EKA ++  +M   G   D  TYN +  GLC+  ++  A  LL  M+  G  P+ ++Y
Sbjct: 337 GMVEKALEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGVAPNYVSY 396

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
            T++      G   +A   ++D   KG  P ++TY ++I+   K   I  A     +M  
Sbjct: 397 TTLISIHAKEGDMVEARRLFRDMEGKGSRPSVVTYNVMIDGYIKNGSIREAERFKKEMEK 456

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           +G  PDI TY  LV+  C  GK D A+ +   +  RG +PN + Y  L+  L   G  + 
Sbjct: 457 KGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEMKHRGTKPNVVAYTALVSGLAKEGRSEE 516

Query: 346 VDKILDIMNEASHSPTVFTYNILINGL 372
             ++ D M  A  +P    Y++L+  L
Sbjct: 517 AFQLYDDMLAAGLTPDDTLYSVLVGSL 543



 Score = 95.1 bits (235), Expect = 8e-17,   Method: Compositional matrix adjust.
 Identities = 72/287 (25%), Positives = 127/287 (44%), Gaps = 37/287 (12%)

Query: 284 AIEGCSPDIVTYNS--LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG 341
           AI  C   +   ++  +V+  CK G  DDA  +++ L   G+  N+  YN+LL S   + 
Sbjct: 138 AIASCPASVTPLSASVVVDGFCKSGSVDDAHGLLDELPRHGVGLNACCYNSLLDSYTRQR 197

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
             DAV  +L  M      PTV TY IL++GL + G + +    +++M  KN   D+  Y+
Sbjct: 198 NDDAVAGLLKEMENRGVEPTVGTYTILVDGLSRAGDISKVEAVYDEMKRKNVAGDVYFYS 257

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            V+ A C+ G +  A +                                   ++ + + +
Sbjct: 258 AVINAYCRGGNVRRASE-----------------------------------VFDECVGH 282

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G+ P++ T+  LI GFC+  Q+E A  LL ++  RG       +  +I G C+   V+ A
Sbjct: 283 GVEPNERTYGALINGFCKIGQIEAAEMLLADMQLRGVGHNQIVFNTMIDGYCRHGMVEKA 342

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +++  +M     + D   ++T+   +      E+A KL   + E  V
Sbjct: 343 LEIKAVMEKMGIELDIYTYNTLACGLCRVNRMEDAKKLLHIMAEKGV 389



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/119 (22%), Positives = 57/119 (47%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +   G + +A +    M ++  +PD +    L+ G     +++ A ++ + M
Sbjct: 430 TYNVMIDGYIKNGSIREAERFKKEMEKKGLVPDIYTYAGLVHGHCVNGKVDVALRLFEEM 489

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
              G  P+ + Y  +V GL K G+   A  L D+M  +G  PD   Y+ ++ ++  + +
Sbjct: 490 KHRGTKPNVVAYTALVSGLAKEGRSEEAFQLYDDMLAAGLTPDDTLYSVLVGSLHTDSR 548


>gi|302815687|ref|XP_002989524.1| hypothetical protein SELMODRAFT_41495 [Selaginella moellendorffii]
 gi|300142702|gb|EFJ09400.1| hypothetical protein SELMODRAFT_41495 [Selaginella moellendorffii]
          Length = 523

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 114/429 (26%), Positives = 218/429 (50%), Gaps = 13/429 (3%)

Query: 141 DIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR 200
           +++ + N +P+      L+R   +   ++K +  L  +V +G      T+  +   LCK 
Sbjct: 95  ELIEQENFVPEDSTADLLVRIYCKGFAVDKGAWFLGRLVNAGVRVSAKTFVKLAESLCKA 154

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC-PPYLIT 259
           G+   A+ L D M  +G   D+ TY+ ++  +   G+   A    +   +  C  P  +T
Sbjct: 155 GKEDIAVKLFDRMGANGAPEDIHTYHCVVDAITSFGRIDHATAVLEAMEQSDCCKPDTVT 214

Query: 260 YTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLL 319
           YT +I+  C++  + +A+ +   M     SPD+VT+  L+N  CK  K+D+A++++   L
Sbjct: 215 YTRMIDGFCRRGELDKALVIYSRMKNSESSPDVVTFGCLINGFCKALKFDEAIIILKASL 274

Query: 320 SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
             G+EP+ ITY++++  L +   WD    + ++  + +   +++ Y+ L+N LCK G ++
Sbjct: 275 DAGLEPDEITYSSIIDPLCNLELWDIALVVFELARQRNCPGSIYLYSRLMNCLCKAGKIE 334

Query: 380 RAI-----------NSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
            A+           +S   +  + C+P +V YN V+ A C+E  + EALQ+   +     
Sbjct: 335 EAVLLLEDMSHGRKHSGQALGGEVCKPTLVIYNNVIDAFCQENRIEEALQMAKAMEEQGI 394

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGIS-PDDITHRTLIWGFCRADQVEEAV 487
              ++TY + +  L K G +++A  L   M  +G S PD I    L+  FC A +VEEA 
Sbjct: 395 GADVVTYTSFLRALCKVGMVDEACKLLEMMATSGSSFPDVIACNALVGAFCSAARVEEAC 454

Query: 488 DLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKV 547
           +LL+ + + G +  +  Y  VI  LC SK+++ A+ + E M  + + P  T +  ++  +
Sbjct: 455 NLLRAMLEHGIEPDDLTYTQVIGALCASKRMEAAMLLFEYMKVANHTPKLTTYKELMLGL 514

Query: 548 ADDGMTEEA 556
             +G  ++A
Sbjct: 515 YVNGSLQDA 523



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 117/397 (29%), Positives = 191/397 (48%), Gaps = 26/397 (6%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           KT  K+ ++ C  GK   A KL D M       D H    ++  +    RI+ A+ VL+ 
Sbjct: 142 KTFVKLAESLCKAGKEDIAVKLFDRMGANGAPEDIHTYHCVVDAITSFGRIDHATAVLEA 201

Query: 178 MVMSGGV-PDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
           M  S    PDT+TY  M+ G C+RG++  A+ +   M  S   PDV+T+  ++       
Sbjct: 202 MEQSDCCKPDTVTYTRMIDGFCRRGELDKALVIYSRMKNSESSPDVVTFGCLINGFCKAL 261

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
           KF +AI   K  L  G  P  ITY+ +I+ +C       A+ V +      C   I  Y+
Sbjct: 262 KFDEAIIILKASLDAGLEPDEITYSSIIDPLCNLELWDIALVVFELARQRNCPGSIYLYS 321

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
            L+N  CK GK ++AVL++ + +S G + +         +LG   C              
Sbjct: 322 RLMNCLCKAGKIEEAVLLLED-MSHGRKHSG-------QALGGEVC-------------- 359

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              PT+  YN +I+  C+   ++ A+     M  +    D+VTY + L ALCK GM++EA
Sbjct: 360 --KPTLVIYNNVIDAFCQENRIEEALQMAKAMEEQGIGADVVTYTSFLRALCKVGMVDEA 417

Query: 417 LQLLHLLNGSSCS-PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            +LL ++  S  S P +I  N L+        +E+A  L   M+E+GI PDD+T+  +I 
Sbjct: 418 CKLLEMMATSGSSFPDVIACNALVGAFCSAARVEEACNLLRAMLEHGIEPDDLTYTQVIG 477

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGL 512
             C + ++E A+ L + +    +  + + Y+ ++ GL
Sbjct: 478 ALCASKRMEAAMLLFEYMKVANHTPKLTTYKELMLGL 514



 Score =  132 bits (332), Expect = 4e-28,   Method: Compositional matrix adjust.
 Identities = 88/348 (25%), Positives = 158/348 (45%), Gaps = 47/348 (13%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T  +++  FC RG+L                                   +KA  + 
Sbjct: 211 DTVTYTRMIDGFCRRGEL-----------------------------------DKALVIY 235

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M  S   PD +T+  ++ G CK  +   AI +L     +G EPD ITY++I+  + + 
Sbjct: 236 SRMKNSESSPDVVTFGCLINGFCKALKFDEAIIILKASLDAGLEPDEITYSSIIDPLCNL 295

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI---------- 285
             +  A+  ++   ++ CP  +  Y+ L+  +CK   I  A+ +L+DM+           
Sbjct: 296 ELWDIALVVFELARQRNCPGSIYLYSRLMNCLCKAGKIEEAVLLLEDMSHGRKHSGQALG 355

Query: 286 -EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
            E C P +V YN++++  C++ + ++A+ +   +  +G+  + +TY + L +L   G  D
Sbjct: 356 GEVCKPTLVIYNNVIDAFCQENRIEEALQMAKAMEEQGIGADVVTYTSFLRALCKVGMVD 415

Query: 345 AVDKILDIMNEASHS-PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
              K+L++M  +  S P V   N L+   C    V+ A N    M+    +PD +TY  V
Sbjct: 416 EACKLLEMMATSGSSFPDVIACNALVGAFCSAARVEEACNLLRAMLEHGIEPDDLTYTQV 475

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
           +GALC    +  A+ L   +  ++ +P L TY  L+ GL   G ++ A
Sbjct: 476 IGALCASKRMEAAMLLFEYMKVANHTPKLTTYKELMLGLYVNGSLQDA 523



 Score =  120 bits (302), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/424 (21%), Positives = 182/424 (42%), Gaps = 50/424 (11%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           TYN ++  L   G++    ++L EM   GC  D+     ++ +   +G   +A G   + 
Sbjct: 2   TYNQIISVLASAGRMEDLDSVLSEMVDRGCSVDLEAAADLVVSYAKSGMVDRAQGILSEL 61

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM-AIEGCSPDIVTYNSLVNFSCKQGK 307
            ++        Y  + + + +        E+++++   E   P+  T + LV   CK   
Sbjct: 62  RKRELTLPARIYNSVFKALDRMHRFQEVFEMVEELIEQENFVPEDSTADLLVRIYCKGFA 121

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
            D     +  L++ G+  ++ T+  L  SL   G  D   K+ D M        + TY+ 
Sbjct: 122 VDKGAWFLGRLVNAGVRVSAKTFVKLAESLCKAGKEDIAVKLFDRMGANGAPEDIHTYHC 181

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNC-QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
           +++ +  +G +D A      M   +C +PD VTY  ++   C+ G L++AL +   +  S
Sbjct: 182 VVDAITSFGRIDHATAVLEAMEQSDCCKPDTVTYTRMIDGFCRRGELDKALVIYSRMKNS 241

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI--------WG-- 476
             SP ++T+  LI+G  K    ++A+++    ++ G+ PD+IT+ ++I        W   
Sbjct: 242 ESSPDVVTFGCLINGFCKALKFDEAIIILKASLDAGLEPDEITYSSIIDPLCNLELWDIA 301

Query: 477 -------------------------FCRADQVEEAVDLLKEIGKRGNKMRNSA------- 504
                                     C+A ++EEAV LL+++   G K    A       
Sbjct: 302 LVVFELARQRNCPGSIYLYSRLMNCLCKAGKIEEAVLLLEDMS-HGRKHSGQALGGEVCK 360

Query: 505 -----YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
                Y  VI   C+  +++ A+Q+ + M       D   +++ ++ +   GM +EA KL
Sbjct: 361 PTLVIYNNVIDAFCQENRIEEALQMAKAMEEQGIGADVVTYTSFLRALCKVGMVDEACKL 420

Query: 560 WQKL 563
            + +
Sbjct: 421 LEMM 424



 Score = 90.9 bits (224), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 70/280 (25%), Positives = 130/280 (46%), Gaps = 47/280 (16%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L +S    +E DE T + I+   C+  +L D + ++  +AR+   P          G I 
Sbjct: 270 LKASLDAGLEPDEITYSSIIDPLCNL-ELWDIALVVFELARQRNCP----------GSIY 318

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMS----VSG--- 217
           +                        Y+ ++  LCK G+I  A+ LL++MS     SG   
Sbjct: 319 L------------------------YSRLMNCLCKAGKIEEAVLLLEDMSHGRKHSGQAL 354

Query: 218 ----CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
               C+P ++ YN ++       + ++A+   K    +G    ++TYT  +  +CK   +
Sbjct: 355 GGEVCKPTLVIYNNVIDAFCQENRIEEALQMAKAMEEQGIGADVVTYTSFLRALCKVGMV 414

Query: 274 ARAIEVLDDMAIEGCS-PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
             A ++L+ MA  G S PD++  N+LV   C   + ++A  ++  +L  G+EP+ +TY  
Sbjct: 415 DEACKLLEMMATSGSSFPDVIACNALVGAFCSAARVEEACNLLRAMLEHGIEPDDLTYTQ 474

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
           ++ +L +    +A   + + M  A+H+P + TY  L+ GL
Sbjct: 475 VIGALCASKRMEAAMLLFEYMKVANHTPKLTTYKELMLGL 514


>gi|225454948|ref|XP_002277434.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14770,
           mitochondrial-like [Vitis vinifera]
          Length = 835

 Score =  187 bits (476), Expect = 9e-45,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 195/376 (51%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           +N+++ G C+ G+I  A+ LL+ M   G  PD++TYNT++      G    A     +  
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
                P +ITYT LI+  CK   +  A+ + D+M ++   PD+VTY  ++N  CK GK +
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A  V   +   G+ PN  +Y TL+ SL   G       +   M        V  Y  L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +GL K G+ + A + F  ++ ++  P+ VTY+ ++   CK G +N+   LL  +      
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P +I Y++++DG  KKG + +AM +  +M++  I P+   + TLI G+ +ADQ   A+DL
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            KE+  RG +  N      ++ L +S +++ A ++ + M+S    PD   +++++     
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 550 DGMTEEAYKLWQKLIE 565
            G   +A+ + Q++ E
Sbjct: 380 AGKESDAFNIAQEMTE 395



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 219/461 (47%), Gaps = 11/461 (2%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           P +    +  N ++  +C  G+++ A +L++ M      PD      L+ G  +I  +  
Sbjct: 11  PEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFT 70

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A K++  + +    P+ ITY  ++   CK   +  A+ + DEM+V    PDV+TY  I+ 
Sbjct: 71  AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +  +GK ++A   +++    G  P   +Y  LI+ + K+  +A A  +   M + G   
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+V Y +L++   K G  ++A  +   LL   + PN +TY+ L+      G  +  + +L
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M E    P V  Y+ +++G  K GL++ A++   +MV +N  P++  Y T++    K 
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
                AL L   +            ++ ++ L + G ME+A  L+  MM  G+ PD + +
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-----SKKVDMAIQVL 525
            +++ GF +A +  +A ++ +E+ ++ +     AY ++I+GL K     S+     ++ L
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            L       PD   F+T++     +G    A KL  ++  +
Sbjct: 431 GL------APDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 212/444 (47%), Gaps = 7/444 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+  +  +G L +A  ++  M +RN +P+      LI G  + D+   A  + + M   G
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +    +  V  L + G++  A  L  +M   G  PD + Y +++   F  GK   A 
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++   K     ++ Y +LI  + K  G   +      M   G +PD  T+N+++N  
Sbjct: 388 NIAQEMTEKSSGFDVVAYNVLINGLFK-LGKYESESFHTGMRQLGLAPDSATFNTMINAY 446

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE---ASHS 359
           CK+G   +A+ ++N + S G++PNSIT N L+  L + G    ++K +D++N+       
Sbjct: 447 CKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG---EIEKTMDLLNDMLVMGFH 503

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           PT  T+  +++   K    D  ++  +Q+V    + D+ TYNT++   C+ GM+  A  +
Sbjct: 504 PTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLV 563

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              + G      +ITYN LI G      ++KA  ++ QM+  G+SP+  T+  L+ G   
Sbjct: 564 FKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSA 623

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A  ++EA  L+ ++ +RG     + Y +++ G  K   +   +++   MI+  + P    
Sbjct: 624 ARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRT 683

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           ++ ++   A      +A +L Q++
Sbjct: 684 YNVLISCFAKGKKMSQAKELMQEM 707



 Score =  164 bits (416), Expect = 8e-38,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 219/468 (46%), Gaps = 17/468 (3%)

Query: 120 NNKILQNFCSR----GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           NN ++ +F +     G++ +A +L   M  R  +PD     +++ G  +  +   A  + 
Sbjct: 331 NNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIA 390

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M       D + YN+++ GL K G+  S  +    M   G  PD  T+NT++      
Sbjct: 391 QEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKE 449

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A+    +    G  P  IT  IL++++C    I + +++L+DM + G  P   T+
Sbjct: 450 GNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTH 509

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            ++++ S K  + D  + + + L+  G++ +  TYNTL+ +    G       +   M  
Sbjct: 510 KAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMG 569

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 + TYN LI+G C    + +A    +QM+++   P++ TYN +LG L    ++ E
Sbjct: 570 KGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE 629

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L++ +      P   TY+ L+ G  K G M++ + LY +M+  G  P   T+  LI 
Sbjct: 630 AAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLIS 689

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-SKKVDM-----------AIQ 523
            F +  ++ +A +L++E+  RG    +S Y ++I G  K SK+ ++           A +
Sbjct: 690 CFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKR 749

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           + E M    + P +   + I   +A  G   +A ++  KL + K  ++
Sbjct: 750 LFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKTVQE 797



 Score =  157 bits (397), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 201/446 (45%), Gaps = 1/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C  G +     L+  M  ++  P+     +++ G  +   + +A  V++ M
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V    +P+   Y  ++ G  K  Q   A+ L  EM   G E +    ++ +  +  +G+ 
Sbjct: 289 VQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRM 348

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A   +KD + +G  P  + YT +++   K    + A  +  +M  +    D+V YN L
Sbjct: 349 EEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVL 408

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   K GKY+        +   G+ P+S T+NT++++    G      K+L+ M     
Sbjct: 409 INGLFKLGKYESESFH-TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   T NIL+  LC  G +++ ++  N M+     P   T+  VL A  K    +  L 
Sbjct: 468 KPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILH 527

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   L G      L TYNTLI    + G + +A +++  MM  GI  D IT+  LI G+C
Sbjct: 528 MHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYC 587

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
            +  +++A  +  ++   G       Y +++ GL  ++ +  A  ++  M      P+ T
Sbjct: 588 ISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNAT 647

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            +  +V      G  +E  KL+ ++I
Sbjct: 648 TYDILVSGHGKIGNMKECVKLYCEMI 673



 Score =  145 bits (365), Expect = 8e-32,   Method: Compositional matrix adjust.
 Identities = 113/487 (23%), Positives = 207/487 (42%), Gaps = 36/487 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ +    G + +A  L   M  R    D      L+ GL +      A  + Q+++   
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VP+ +TY+ ++ G CK G +     LL EM      P+VI Y++I+      G   +A+
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCK--QCGIA-------------------------- 274
              +  +++   P +  Y  LI+   K  Q GIA                          
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 275 -------RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                   A E+  DM   G  PD V Y S+++   K GK  DA  +   +  +    + 
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           + YN L++ L   G +++ +     M +   +P   T+N +IN  CK G +  A+   N+
Sbjct: 403 VAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M S   +P+ +T N ++  LC  G + + + LL+ +      P   T+  ++D  +K   
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            +  + ++ Q++  G+  D  T+ TLI  FCR   +  A  + K++  +G       Y  
Sbjct: 522 ADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +IHG C S  +  A  V   M++    P+   ++ ++  ++   + +EA  L  ++ E  
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 568 VFEKGTT 574
           +    TT
Sbjct: 642 LVPNATT 648



 Score =  119 bits (298), Expect = 4e-24,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 166/386 (43%), Gaps = 13/386 (3%)

Query: 74  DQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPF-VENDEKTNNKILQNFCSRGK 132
           +  E SS   V+A N  + GL    K    S  +      +  D  T N ++  +C  G 
Sbjct: 392 EMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGN 451

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L +A KL++ M      P+   C  L++ L     IEK   +L  M++ G  P   T+  
Sbjct: 452 LGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKA 511

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++    K  +    + + D++   G + D+ TYNT++ T    G  ++A   +KD + KG
Sbjct: 512 VLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKG 571

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
               +ITY  LI   C    + +A  V   M  EG SP++ TYN L+          +A 
Sbjct: 572 ILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAA 631

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            ++N +  RG+ PN+ TY+ L+   G  G      K+   M      P   TYN+LI+  
Sbjct: 632 GLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCF 691

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA---LCKEGMLN---------EALQLL 420
            K   + +A     +M  +   P+  TY+ ++     L K+  LN         EA +L 
Sbjct: 692 AKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLF 751

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKG 446
             +N     PC  T   +   LAK G
Sbjct: 752 EEMNEKGFIPCENTLACISFTLAKPG 777



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           +N L+      G      ++L+ M     +P + TYN L+NG CK G +  A     ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
             N +P+++TY T++ A CK   L +AL +   +   S  P ++TY  +++GL K G +E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A  ++ +M E G+ P+  ++ TLI    +   V EA  L   +  RG       Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            GL K+   + A  + ++++     P+   +S ++      G   +   L Q++ E  +F
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259


>gi|357127090|ref|XP_003565218.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g59900-like [Brachypodium distachyon]
          Length = 886

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/454 (25%), Positives = 214/454 (47%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D+ T ++IL +     +   A  L D M     + D +     IR    +  ++ A 
Sbjct: 158 IAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEVRNLDGAK 217

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            ++  M   G     + YN+++ GLCK  ++R A+ + + M   G   D +T  T++   
Sbjct: 218 GLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGF 277

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               +   A+    D  R G  P     + +++ + K+  +  A  +   +      P+I
Sbjct: 278 CRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNI 337

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
             YN+L+N  CK G + +A  ++N +  +G+EPN +TY  L+HSL  RG  D    +LD 
Sbjct: 338 FAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDR 397

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M E     TV+ YN LIN  CK   +D A+   ++MV     P+  +Y+ V+  LC++G 
Sbjct: 398 MREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGD 457

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           L+ A++L   +     +    T+  LI+G  K   M++A  L+ +M E+ + P+++T   
Sbjct: 458 LSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNA 517

Query: 473 LIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSR 532
           +I G+C    + +A  L  ++  RG    N  YR +I GLC +     A + +  + ++ 
Sbjct: 518 VIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNC 577

Query: 533 YKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
              +    + ++     +G   EAY +W ++  W
Sbjct: 578 SVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMW 611



 Score =  182 bits (463), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 114/444 (25%), Positives = 205/444 (46%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C   ++ +A  + + M  R    D   C  L+ G  R + ++ A ++   M  
Sbjct: 236 NVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFCRTEELDMALEMTGDMAR 295

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G VP     + M+ GL K+G++  A  L  ++      P++  YN +L  M  NG F +
Sbjct: 296 LGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIFAYNALLNNMCKNGMFSE 355

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A     +   KG  P  +TY ILI  +CK+  +  A+ +LD M  +G    +  YNSL+N
Sbjct: 356 ADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLIN 415

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK+   D A+  ++ ++  G+ PN+ +Y+ ++  L  +G      ++   M E   + 
Sbjct: 416 CCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAW 475

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
             +T+  LING CK   +D A   FN+M   N +P+ VT+N V+   C  G + +A QL 
Sbjct: 476 NTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLY 535

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +     +P   TY +LI GL       KA      +  N    +  +   L+ GFCR 
Sbjct: 536 DQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCRE 595

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            ++ EA  +  E+   G K+   ++ ++++   K    + +  +   M     +PD+   
Sbjct: 596 GRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFH 655

Query: 541 STIVKKVADDGMTEEAYKLWQKLI 564
           + ++   + +G   +A   W ++I
Sbjct: 656 TCMINMYSKEGNMVQALNCWDEMI 679



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 114/488 (23%), Positives = 219/488 (44%), Gaps = 35/488 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  DE T   ++  FC   +L  A ++   MAR   +P    C  ++ GL +  R+E+A 
Sbjct: 263 VAADEVTCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAF 322

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++   +     VP+   YN ++  +CK G    A  L++EMS  G EP+ +TY  ++ ++
Sbjct: 323 RLACQLGELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSL 382

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+        KG    +  Y  LI   CK+  +  A+  L +M   G +P+ 
Sbjct: 383 CKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNA 442

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            +Y+ ++   C++G    AV +   +  +G+  N+ T+  L++        D   ++ + 
Sbjct: 443 ASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNK 502

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC---- 408
           M E++  P   T+N +I G C  G + +A   ++QM+ +   PD  TY +++  LC    
Sbjct: 503 MTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDG 562

Query: 409 -------------------------------KEGMLNEALQLLHLLNGSSCSPCLITYNT 437
                                          +EG L EA  + + +        LI++  
Sbjct: 563 ASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTI 622

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           ++    K+   EK+ VL+ +M E G+ PD++ H  +I  + +   + +A++   E+   G
Sbjct: 623 IVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADG 682

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
           +      Y  +++ LCKS  +  A  + + M++S + P+   F+  +   A +G  E A 
Sbjct: 683 HLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAK 742

Query: 558 KLWQKLIE 565
            L+  +++
Sbjct: 743 DLYFAMLQ 750



 Score =  168 bits (425), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 104/391 (26%), Positives = 192/391 (49%)

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           VL + + +G  PD  T + ++  L K  Q   A  L D M  SG   D   Y   +R   
Sbjct: 149 VLHLSLSAGIAPDQHTASQILFSLVKIRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYC 208

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
           +      A G       +G     + Y +LI  +CK   +  A++V + M   G + D V
Sbjct: 209 EVRNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEV 268

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           T  +LV   C+  + D A+ +  ++   G  P+    + +L  L  +G  +   ++   +
Sbjct: 269 TCRTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQL 328

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            E    P +F YN L+N +CK G+   A    N+M  K  +P+ VTY  ++ +LCK GM+
Sbjct: 329 GELRMVPNIFAYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMM 388

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           ++AL +L  +        +  YN+LI+   KK  ++ AM    +M+E G++P+  ++  +
Sbjct: 389 DDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPV 448

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G CR   +  AV+L +++ ++G       +  +I+G CK+KK+D A ++   M  S  
Sbjct: 449 IAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNL 508

Query: 534 KPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +P++  F+ +++     G   +A++L+ +++
Sbjct: 509 EPNEVTFNAVIEGYCLVGDIRKAFQLYDQMM 539



 Score =  166 bits (420), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 118/487 (24%), Positives = 225/487 (46%), Gaps = 6/487 (1%)

Query: 80  SESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKL 139
           + S +L    K+R   + +   D  L S     V  DE      ++ +C    L  A  L
Sbjct: 164 TASQILFSLVKIRQFALARHLFDGMLHSG----VLLDEYVYTAGIRAYCEVRNLDGAKGL 219

Query: 140 IDIMARR-NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
           +  M    +++    + + LI GL +  R+ +A  V   M+  G   D +T   +V G C
Sbjct: 220 VARMQDEGDKVSAVPYNV-LIYGLCKNQRVREAVDVKNSMLARGVAADEVTCRTLVYGFC 278

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
           +  ++  A+ +  +M+  G  P     + +L  +   G+ ++A             P + 
Sbjct: 279 RTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGELRMVPNIF 338

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
            Y  L+  +CK    + A  ++++M+ +G  P+ VTY  L++  CK+G  DDA+ +++ +
Sbjct: 339 AYNALLNNMCKNGMFSEADRLVNEMSDKGLEPNEVTYAILIHSLCKRGMMDDALCMLDRM 398

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             +G+      YN+L++    +   D     L  M E   +P   +Y+ +I GLC+ G +
Sbjct: 399 REKGVRMTVYPYNSLINCCCKKDDLDMAMGFLSEMVEIGLTPNAASYSPVIAGLCRKGDL 458

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A+    +M  K    +  T+  ++   CK   ++EA +L + +  S+  P  +T+N +
Sbjct: 459 SGAVELHRKMAEKGVAWNTYTFTALINGFCKAKKMDEASRLFNKMTESNLEPNEVTFNAV 518

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I+G    G + KA  LY QMM  G++PD+ T+R+LI G C  D   +A + + ++    +
Sbjct: 519 IEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAKEFVADLENNCS 578

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
            +   +   ++HG C+  ++  A  V   M     K D   F+ IV        +E++  
Sbjct: 579 VLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAALKQHDSEKSCV 638

Query: 559 LWQKLIE 565
           L++++ E
Sbjct: 639 LFREMKE 645



 Score =  162 bits (409), Expect = 6e-37,   Method: Compositional matrix adjust.
 Identities = 99/364 (27%), Positives = 180/364 (49%), Gaps = 1/364 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +E T N +++ +C  G +  A +L D M  R   PD +   +LI GL   D   KA 
Sbjct: 508 LEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDNYTYRSLISGLCLTDGASKAK 567

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           + +  +  +  V +  +   ++ G C+ G++  A  + +EM++ G + D+I++  I+   
Sbjct: 568 EFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNEMAMWGGKLDLISFTIIVYAA 627

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
                 +++   +++   KG  P  + +T +I    K+  + +A+   D+M  +G  P+ 
Sbjct: 628 LKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGNMVQALNCWDEMIADGHLPNT 687

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY +LVN  CK      A L+   +L+    PNS T+N  L    + G  +    +   
Sbjct: 688 VTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNCFLDYFATEGNLETAKDLYFA 747

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +   +  + + N LI G CK G +  AI+  ++       PD ++Y+TV+  LCK+G 
Sbjct: 748 MLQGFLA-NIVSVNTLIKGFCKVGQIQEAIDLISRSTENGFFPDCISYSTVIHELCKKGD 806

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
           +NEA++L + +      P ++ YN LI      G  +K + +Y  M++ G+ P+  THR 
Sbjct: 807 INEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCLGIYIDMVKKGVQPNWHTHRA 866

Query: 473 LIWG 476
           L  G
Sbjct: 867 LFVG 870



 Score =  156 bits (394), Expect = 3e-35,   Method: Compositional matrix adjust.
 Identities = 115/488 (23%), Positives = 220/488 (45%), Gaps = 36/488 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E +E T   ++ + C RG + DA  ++D M  +      +   +LI    + D ++ A 
Sbjct: 368 LEPNEVTYAILIHSLCKRGMMDDALCMLDRMREKGVRMTVYPYNSLINCCCKKDDLDMAM 427

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
             L  MV  G  P+  +Y+ ++ GLC++G +  A+ L  +M+  G   +  T+  ++   
Sbjct: 428 GFLSEMVEIGLTPNAASYSPVIAGLCRKGDLSGAVELHRKMAEKGVAWNTYTFTALINGF 487

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K  +A   +         P  +T+  +IE  C    I +A ++ D M   G +PD 
Sbjct: 488 CKAKKMDEASRLFNKMTESNLEPNEVTFNAVIEGYCLVGDIRKAFQLYDQMMCRGLTPDN 547

Query: 293 VTYNSLVN---------------------------FS--------CKQGKYDDAVLVINN 317
            TY SL++                           FS        C++G+  +A  V N 
Sbjct: 548 YTYRSLISGLCLTDGASKAKEFVADLENNCSVLNKFSLTALLHGFCREGRLTEAYHVWNE 607

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G + + I++  ++++   +   +    +   M E    P    +  +IN   K G 
Sbjct: 608 MAMWGGKLDLISFTIIVYAALKQHDSEKSCVLFREMKEKGVRPDNVFHTCMINMYSKEGN 667

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           + +A+N +++M++    P+ VTY  ++  LCK   L+ A  L   +  S   P   T+N 
Sbjct: 668 MVQALNCWDEMIADGHLPNTVTYTALVNNLCKSWHLSSAELLCKEMLASHFLPNSYTFNC 727

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
            +D  A +G +E A  LY  M++ G   + ++  TLI GFC+  Q++EA+DL+    + G
Sbjct: 728 FLDYFATEGNLETAKDLYFAMLQ-GFLANIVSVNTLIKGFCKVGQIQEAIDLISRSTENG 786

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
                 +Y  VIH LCK   ++ AI++   M+    KPD   ++ +++     G +++  
Sbjct: 787 FFPDCISYSTVIHELCKKGDINEAIELWNEMLYKGVKPDIVAYNILIRWCNIHGESDKCL 846

Query: 558 KLWQKLIE 565
            ++  +++
Sbjct: 847 GIYIDMVK 854



 Score = 62.0 bits (149), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 45/183 (24%), Positives = 86/183 (46%), Gaps = 6/183 (3%)

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI---TYNTLIDGLAKK 445
           +S    PD  T + +L +L K   + +     HL +G   S  L+    Y   I    + 
Sbjct: 154 LSAGIAPDQHTASQILFSLVK---IRQFALARHLFDGMLHSGVLLDEYVYTAGIRAYCEV 210

Query: 446 GCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAY 505
             ++ A  L  +M + G     + +  LI+G C+  +V EAVD+   +  RG        
Sbjct: 211 RNLDGAKGLVARMQDEGDKVSAVPYNVLIYGLCKNQRVREAVDVKNSMLARGVAADEVTC 270

Query: 506 RLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           R +++G C+++++DMA+++   M    + P +   S ++  +   G  EEA++L  +L E
Sbjct: 271 RTLVYGFCRTEELDMALEMTGDMARLGFVPSEANCSFMLDGLRKKGRVEEAFRLACQLGE 330

Query: 566 WKV 568
            ++
Sbjct: 331 LRM 333


>gi|297828900|ref|XP_002882332.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
 gi|297328172|gb|EFH58591.1| hypothetical protein ARALYDRAFT_896436 [Arabidopsis lyrata subsp.
           lyrata]
          Length = 790

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/432 (26%), Positives = 210/432 (48%), Gaps = 5/432 (1%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           K  N++L      G + + ++L   M       D +    +I    ++  +++A + +  
Sbjct: 158 KCYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCK 217

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M+ +G  PD  T    + G C+   + SA  + +EM       + ++YN ++  + + G+
Sbjct: 218 MIQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMP----NRNEVSYNQLIHGLCEAGR 273

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
             +A+  +       C P + TYT LI+ +C++  + +A+ +LD+M      PD++TYNS
Sbjct: 274 IDEAVSLFVRMKDDCCYPNVYTYTALIKGLCRK-NVHKAMGLLDEMLERNLVPDLITYNS 332

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   C+ G  D A  +++ +  RG+ P+  TY   +  L      +   ++ D + E  
Sbjct: 333 LIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEG 392

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
            S  V  Y++LI+G CK G VD A   F +M+SKNC P+  T+N ++  LC  G L EAL
Sbjct: 393 VSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEAL 452

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            L   +      P + T+N LI  + K+G  + A     +MM +G  P   T+   I  +
Sbjct: 453 SLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVY 512

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDD 537
           C A +V+EA D++ ++ + G    +  Y  +I    K      A  VL+ M  +  +P  
Sbjct: 513 CSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSH 572

Query: 538 TVFSTIVKKVAD 549
             F +++K++ D
Sbjct: 573 HTFLSLIKQLFD 584



 Score =  186 bits (472), Expect = 3e-44,   Method: Compositional matrix adjust.
 Identities = 130/495 (26%), Positives = 224/495 (45%), Gaps = 39/495 (7%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           +E + N+++   C  G++ +A  L   M      P+ +    LI+GL R   + KA  +L
Sbjct: 257 NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKGLCR-KNVHKAMGLL 315

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             M+    VPD ITYN ++ G C+ G + SA  LL  M   G  PD  TY   +  +  +
Sbjct: 316 DEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKS 375

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + ++A   +     +G    +I Y++LI+  CK   +  A  + + M  + CSP+  T+
Sbjct: 376 NRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTF 435

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N+L++  C  G   +A+ + + ++  G++P   T+N L+  +  +G +D   K L  M  
Sbjct: 436 NALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMS 495

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P   TYN  I   C  G V  A +   QM  +   PD  TY +++ A  K G+   
Sbjct: 496 SGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYS 555

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLA-KKGCMEKA----------------------- 451
           A  +L  +  + C P   T+ +LI  L  K+  +EK+                       
Sbjct: 556 AFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWKMM 615

Query: 452 -----MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
                + L+ +M ++G +PD   +  LI G C+ + +  A+ LL ++ K G       + 
Sbjct: 616 EFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMVFN 675

Query: 507 LVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL--- 563
            VI   CK +K   A  ++E MI S + P      T++  + ++G TE    +++KL   
Sbjct: 676 AVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLRGC 735

Query: 564 ------IEWKVFEKG 572
                 I WK+   G
Sbjct: 736 GYNDDEIAWKILIDG 750



 Score =  183 bits (464), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 110/382 (28%), Positives = 188/382 (49%), Gaps = 5/382 (1%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           FV  D  T N ++  +C  G + +A + +  M +    PD+    + I G  R   ++ A
Sbjct: 187 FVSMDIYTFNLMINVYCKMGFVKEAKQFMCKMIQAGLSPDYFTSTSFILGYCRSKDVDSA 246

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +V + M       + ++YN ++ GLC+ G+I  A++L   M    C P+V TY  +++ 
Sbjct: 247 FRVFEEMPNR----NEVSYNQLIHGLCEAGRIDEAVSLFVRMKDDCCYPNVYTYTALIKG 302

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +      K A+G   + L +   P LITY  LI   C+   +  A  +L  M   G  PD
Sbjct: 303 LCRKNVHK-AMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLMKERGLVPD 361

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
             TY   ++F CK  + ++A  + ++L   G+  N I Y+ L+      G  D    + +
Sbjct: 362 QRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLFE 421

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M   + SP  +T+N LI+GLC  G +  A++ F+QMV    +P + T+N ++G + K+G
Sbjct: 422 KMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQG 481

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
             ++A + L  +  S   P   TYN  I+     G +++A  +  QM E G+ PDD T+ 
Sbjct: 482 DFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYT 541

Query: 472 TLIWGFCRADQVEEAVDLLKEI 493
           +LI  + +      A D+LK +
Sbjct: 542 SLIKAYGKLGLTYSAFDVLKSM 563



 Score =  169 bits (428), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 116/474 (24%), Positives = 206/474 (43%), Gaps = 30/474 (6%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   +++  C R  +  A  L+D M  RN +PD     +LI G  R   ++ A ++L +M
Sbjct: 295 TYTALIKGLC-RKNVHKAMGLLDEMLERNLVPDLITYNSLIAGQCRAGHLDSAYRLLSLM 353

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G VPD  TY   +  LCK  ++  A  L D ++  G   +VI Y+ ++      GK 
Sbjct: 354 KERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKV 413

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A   ++  L K C P   T+  LI  +C    +  A+ + D M   G  P + T+N L
Sbjct: 414 DEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNIL 473

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +    KQG +DDA   +  ++S G +P + TYN  +    S G     + ++  M E   
Sbjct: 474 IGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGV 533

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE--- 415
            P  FTY  LI    K GL   A +    M   +C+P   T+ +++  L  +  + E   
Sbjct: 534 PPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSG 593

Query: 416 --------------------------ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
                                      ++L   +    C+P    Y  LI G+ K   + 
Sbjct: 594 ETGVESVSNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLG 653

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
            A+ L  QM + GISP ++    +I   C+  +  EA ++++++   G+  +    + +I
Sbjct: 654 IALKLLDQMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLI 713

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            GL +  + +    V + +    Y  D+  +  ++  +   G+ EE  +L++++
Sbjct: 714 CGLYEEGETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEM 767



 Score =  158 bits (400), Expect = 7e-36,   Method: Compositional matrix adjust.
 Identities = 103/424 (24%), Positives = 198/424 (46%), Gaps = 6/424 (1%)

Query: 155 CIN-LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEM 213
           C N L+  L R   +++ +++   M+      D  T+N+M+   CK G ++ A   + +M
Sbjct: 159 CYNELLTLLARFGLVDEMNQLYTEMLEEFVSMDIYTFNLMINVYCKMGFVKEAKQFMCKM 218

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
             +G  PD  T  + +     +     A   +++   +      ++Y  LI  +C+   I
Sbjct: 219 IQAGLSPDYFTSTSFILGYCRSKDVDSAFRVFEEMPNRN----EVSYNQLIHGLCEAGRI 274

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTL 333
             A+ +   M  + C P++ TY +L+   C++  +  A+ +++ +L R + P+ ITYN+L
Sbjct: 275 DEAVSLFVRMKDDCCYPNVYTYTALIKGLCRKNVHK-AMGLLDEMLERNLVPDLITYNSL 333

Query: 334 LHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC 393
           +      G  D+  ++L +M E    P   TY   I+ LCK   V+ A   F+ +  +  
Sbjct: 334 IAGQCRAGHLDSAYRLLSLMKERGLVPDQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGV 393

Query: 394 QPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMV 453
             +++ Y+ ++   CK G ++EA  L   +   +CSP   T+N LI GL   G +++A+ 
Sbjct: 394 SANVIMYSVLIDGYCKVGKVDEAGCLFEKMLSKNCSPNAYTFNALIHGLCSAGNLKEALS 453

Query: 454 LYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           L+ QM++ G+ P   T   LI    +    ++A   L+++   G K     Y   I   C
Sbjct: 454 LFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYC 513

Query: 514 KSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGT 573
            + KV  A  ++  M      PDD  +++++K     G+T  A+ + + + +        
Sbjct: 514 SAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHH 573

Query: 574 TLLA 577
           T L+
Sbjct: 574 TFLS 577



 Score =  144 bits (364), Expect = 9e-32,   Method: Compositional matrix adjust.
 Identities = 105/426 (24%), Positives = 183/426 (42%), Gaps = 29/426 (6%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D++T    +   C   ++ +A +L D +       +      LI G  ++ ++++A  + 
Sbjct: 361 DQRTYGCFIDFLCKSNRVEEARRLFDSLTEEGVSANVIMYSVLIDGYCKVGKVDEAGCLF 420

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M+     P+  T+N ++ GLC  G ++ A++L D+M   G +P V T+N ++  M   
Sbjct: 421 EKMLSKNCSPNAYTFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQ 480

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G F  A    +  +  G  P   TY   IE  C    +  A +++  M  EG  PD  TY
Sbjct: 481 GDFDDAHKCLQKMMSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTY 540

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL----------GSRGC--- 342
            SL+    K G    A  V+ ++     EP+  T+ +L+  L          G  G    
Sbjct: 541 TSLIKAYGKLGLTYSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESV 600

Query: 343 ----------------WDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFN 386
                           +D V ++ + M +   +P    Y  LI+G+CK   +  A+   +
Sbjct: 601 SNFGDVPGSNMWKMMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLD 660

Query: 387 QMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKG 446
           QM  +   P  + +N V+   CK     EA  ++  +  S  SP L    TLI GL ++G
Sbjct: 661 QMQKEGISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEG 720

Query: 447 CMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYR 506
             E+   ++ ++   G + D+I  + LI G  +   VEE   L +E+ K G       Y 
Sbjct: 721 ETERGNSVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYS 780

Query: 507 LVIHGL 512
           ++   L
Sbjct: 781 ILTQKL 786



 Score =  107 bits (267), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 81/356 (22%), Positives = 146/356 (41%), Gaps = 29/356 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++   CS G L +A  L D M +    P  +    LI  +++    + A K LQ M
Sbjct: 434 TFNALIHGLCSAGNLKEALSLFDQMVKMGLKPTVYTFNILIGRMLKQGDFDDAHKCLQKM 493

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + SG  P   TYN  +   C  G+++ A  ++ +M   G  PD  TY ++++     G  
Sbjct: 494 MSSGEKPVARTYNAFIEVYCSAGKVQEAEDMMVQMKEEGVPPDDFTYTSLIKAYGKLGLT 553

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR----------------------- 275
             A    K      C P   T+  LI+Q+  +  +                         
Sbjct: 554 YSAFDVLKSMFDADCEPSHHTFLSLIKQLFDKRYVVEKSGETGVESVSNFGDVPGSNMWK 613

Query: 276 ------AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
                  IE+ ++M   GC+PD   Y  L++  CK      A+ +++ +   G+ P+ + 
Sbjct: 614 MMEFDIVIELFEEMEKHGCTPDSKCYEKLISGICKVENLGIALKLLDQMQKEGISPSEMV 673

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           +N ++        +     I++ M  + HSP +     LI GL + G  +R  + F ++ 
Sbjct: 674 FNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGNSVFKKLR 733

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKK 445
                 D + +  ++  + K+G++ E  QL   +  + C+    TY+ L   L  K
Sbjct: 734 GCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKLHGK 789



 Score = 47.0 bits (110), Expect = 0.029,   Method: Compositional matrix adjust.
 Identities = 27/120 (22%), Positives = 52/120 (43%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +   E   N ++   C   K  +A+ +++ M      P    C  LI GL      E+ +
Sbjct: 667 ISPSEMVFNAVISCCCKLQKYGEAANIVEDMICSGHSPQLEHCKTLICGLYEEGETERGN 726

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            V + +   G   D I + +++ G+ K+G +     L +EM  +GC     TY+ + + +
Sbjct: 727 SVFKKLRGCGYNDDEIAWKILIDGMLKQGLVEEFSQLFEEMEKNGCNFSPRTYSILTQKL 786


>gi|255660990|gb|ACU25664.1| pentatricopeptide repeat-containing protein [Glandularia incisa]
          Length = 376

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 187/365 (51%), Gaps = 1/365 (0%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I+ A +V + +V S   PD + YN M+ G  +  +I+    L + M   G    V ++N 
Sbjct: 6   IDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEG-NRSVSSFNI 64

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++R +FDNGK  + I  W+   + G     ITY IL+   CK   I +++ VL+    +G
Sbjct: 65  MMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAQQKG 124

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D   Y++++N  CK+   D AV V+N ++  G +PN+  YNTL++ L     ++   
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAI 184

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M     SPT+ TYN LINGLCK  +   A N   +++ K   P ++TY+ ++  L
Sbjct: 185 RVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGL 244

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C +  + +ALQL + +      P +  +N LI GL   G M+ A+ LY  M     +P+ 
Sbjct: 245 CLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNL 304

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           ++H TL+ GF +   +  A+ +   I + G +    +Y + + GLC   ++  AI  L  
Sbjct: 305 VSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHD 364

Query: 528 MISSR 532
            ++ +
Sbjct: 365 AVTKK 369



 Score =  179 bits (455), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 100/365 (27%), Positives = 190/365 (52%), Gaps = 1/365 (0%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  G +  A ++   +      PD      ++ G  R+ +I+   ++ ++M  S G    
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMM-GSEGNRSV 59

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            ++N+M+ GL   G++   I++ + M  SG   D ITY  ++     NG   +++   + 
Sbjct: 60  SSFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
             +KG       Y+ +I  +CK+  + RA+ VL+ M   GC P+   YN+L+N      K
Sbjct: 120 AQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           ++DA+ V   + +    P  ITYNTL++ L     +     ++  + +   +P V TY++
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSM 239

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           L+ GLC    V++A+  +NQ+ SK  +PD+  +N ++  LC  G +  AL L   +N   
Sbjct: 240 LMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWK 299

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C+P L+++NTL++G  K G +  A+V++ +++ NG+ PD I++   + G C  +++ +A+
Sbjct: 300 CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAI 359

Query: 488 DLLKE 492
             L +
Sbjct: 360 LFLHD 364



 Score =  151 bits (382), Expect = 8e-34,   Method: Compositional matrix adjust.
 Identities = 94/367 (25%), Positives = 165/367 (44%), Gaps = 36/367 (9%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C+ G I  A  +  E+  S   PD + YN +L   F   K K     W            
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELW------------ 48

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                  + M  EG +  + ++N ++      GK D+ + +   
Sbjct: 49  -----------------------EMMGSEG-NRSVSSFNIMMRGLFDNGKVDEVISIWEL 84

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G   +SITY  L+H     G  D    +L++  +       F Y+ +INGLCK   
Sbjct: 85  MKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAQQKGGVLDAFAYSAMINGLCKEAN 144

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +DRA++  N M+   C+P+   YNT++  L       +A+++   +    CSP +ITYNT
Sbjct: 145 LDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+GL K     +A  L  ++++ G++P  IT+  L+ G C   +VE+A+ L  ++  +G
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKG 264

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K     + ++IHGLC   K+ +A+ +   M   +  P+    +T+++    DG    A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 558 KLWQKLI 564
            +W +++
Sbjct: 325 VIWARIL 331



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 87/300 (29%), Positives = 147/300 (49%), Gaps = 1/300 (0%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   I  A  V  ++     SPD V YN+++N   +  K  D   +   + S G    S
Sbjct: 1   CESGDIDGAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSEGNRSVS 60

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
            ++N ++  L   G  D V  I ++M ++       TY IL++G CK G +D++++    
Sbjct: 61  -SFNIMMRGLFDNGKVDEVISIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
              K    D   Y+ ++  LCKE  L+ A+ +L+ +  S C P    YNTLI+GL     
Sbjct: 120 AQQKGGVLDAFAYSAMINGLCKEANLDRAVSVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            E A+ ++ +M     SP  IT+ TLI G C+ +   EA +L+KE+  +G       Y +
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSM 239

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           ++ GLC   KV+ A+Q+   + S  +KPD  + + ++  +   G  + A  L+  +  WK
Sbjct: 240 LMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQLALSLYFDMNRWK 299



 Score =  122 bits (305), Expect = 6e-25,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 144/310 (46%), Gaps = 36/310 (11%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           FVE D  T   ++  FC  G +  +  ++++  ++  + D      +I GL +   +++A
Sbjct: 90  FVE-DSITYGILVHGFCKNGYIDKSLHVLEMAQQKGGVLDAFAYSAMINGLCKEANLDRA 148

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             VL  M+ SG  P+   YN ++ GL    +   AI +  EM    C P +ITYNT++  
Sbjct: 149 VSVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLING 208

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  N  F +A    K+ L KG  P +ITY++L++ +C    + +A+++ + +  +G  PD
Sbjct: 209 LCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPD 268

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +  +N L++  C  GK   A+ +  ++      PN +++NTL+      G         D
Sbjct: 269 VQMHNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDG---------D 319

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           I N       V    IL NGL                     +PDI++YN  L  LC   
Sbjct: 320 IRN-----ALVIWARILRNGL---------------------EPDIISYNITLKGLCSCN 353

Query: 412 MLNEALQLLH 421
            +++A+  LH
Sbjct: 354 RISDAILFLH 363



 Score = 87.0 bits (214), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 102/209 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++       K  DA ++   M   +  P       LI GL + +   +A  +++ ++ 
Sbjct: 168 NTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLD 227

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  ITY+M++ GLC   ++  A+ L ++++  G +PDV  +N ++  +   GK + 
Sbjct: 228 KGLNPGVITYSMLMKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQL 287

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  + D  R  C P L+++  L+E   K   I  A+ +   +   G  PDI++YN  + 
Sbjct: 288 ALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLK 347

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
             C   +  DA+L +++ +++ +    IT
Sbjct: 348 GLCSCNRISDAILFLHDAVTKKIVLTKIT 376


>gi|255660988|gb|ACU25663.1| pentatricopeptide repeat-containing protein [Glandularia dissecta]
          Length = 376

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 186/365 (50%), Gaps = 1/365 (0%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I+ A +V   +V S   PD + YN M+ G  +  +I+    L + M   G    V ++N 
Sbjct: 6   IDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREG-NRSVSSFNI 64

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++R +FDNGK ++ I  W+   + G     ITY IL+   CK   I +++ VL+    +G
Sbjct: 65  MMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKG 124

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D   Y++++N  CK+   D AV V+N ++  G +PN+  YNTL++ L     ++   
Sbjct: 125 GVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAI 184

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M     SPT+ TYN LINGLCK  +   A N   +++ K   P ++TY+ +   L
Sbjct: 185 RVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLXKGL 244

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C +  + +ALQL + +      P +  +N LI GL   G M+ A+ LY  M     +P+ 
Sbjct: 245 CLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQHALSLYFDMNRWKCAPNL 304

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           ++H TL+ GF +   +  A+ +   I + G +    +Y + + GLC   ++  AI  L  
Sbjct: 305 VSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHD 364

Query: 528 MISSR 532
            ++ +
Sbjct: 365 AVTKK 369



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 99/365 (27%), Positives = 188/365 (51%), Gaps = 1/365 (0%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  G +  A ++ + +      PD      ++ G  R+ +I+   ++ ++M   G     
Sbjct: 1   CESGDIDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREGN-RSV 59

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            ++N+M+ GL   G++   I + + M  SG   D ITY  ++     NG   +++   + 
Sbjct: 60  SSFNIMMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
             +KG       Y+ +I  +CK+  + RA+ VL+ M   GC P+   YN+L+N      K
Sbjct: 120 AEQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           ++DA+ V   + +    P  ITYNTL++ L     +     ++  + +   +P V TY++
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSM 239

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           L  GLC    V++A+  +NQ+ SK  +PD+  +N ++  LC  G +  AL L   +N   
Sbjct: 240 LXKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQHALSLYFDMNRWK 299

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C+P L+++NTL++G  K G +  A+V++ +++ NG+ PD I++   + G C  +++ +A+
Sbjct: 300 CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAI 359

Query: 488 DLLKE 492
             L +
Sbjct: 360 LFLHD 364



 Score =  150 bits (378), Expect = 2e-33,   Method: Compositional matrix adjust.
 Identities = 92/367 (25%), Positives = 163/367 (44%), Gaps = 36/367 (9%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C+ G I  A  + +E+  S   PD + YN +L   F   K K     W+   R+G     
Sbjct: 1   CESGDIDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGREG----- 55

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                          +  + ++N ++      GK ++ + +   
Sbjct: 56  -------------------------------NRSVSSFNIMMRGLFDNGKVEEVIXIWEL 84

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G   +SITY  L+H     G  D    +L++  +       F Y+ +INGLCK   
Sbjct: 85  MKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEAN 144

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +DRA+   N M+   C+P+   YNT++  L       +A+++   +    CSP +ITYNT
Sbjct: 145 LDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNT 204

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+GL K     +A  L  ++++ G++P  IT+  L  G C   +VE+A+ L  ++  +G
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKG 264

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K     + ++IHGLC   K+  A+ +   M   +  P+    +T+++    DG    A 
Sbjct: 265 FKPDVQMHNILIHGLCSVGKMQHALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 558 KLWQKLI 564
            +W +++
Sbjct: 325 VIWARIL 331



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 147/300 (49%), Gaps = 1/300 (0%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   I  A  V +++     SPD V YN+++N   +  K  D    +  ++ R    + 
Sbjct: 1   CESGDIDGAERVYNEIVESKVSPDAVVYNAMLNGYFRVAKIKDC-FELWEMMGREGNRSV 59

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
            ++N ++  L   G  + V  I ++M ++       TY IL++G CK G +D++++    
Sbjct: 60  SSFNIMMRGLFDNGKVEEVIXIWELMKKSGFVEDSITYGILVHGFCKNGYIDKSLHVLEM 119

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
              K    D   Y+ ++  LCKE  L+ A+ +L+ +  S C P    YNTLI+GL     
Sbjct: 120 AEQKGGVVDAFAYSAMINGLCKEANLDRAVCVLNGMIKSGCKPNAHVYNTLINGLVGASK 179

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            E A+ ++ +M     SP  IT+ TLI G C+ +   EA +L+KE+  +G       Y +
Sbjct: 180 FEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSM 239

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +  GLC   KV+ A+Q+   + S  +KPD  + + ++  +   G  + A  L+  +  WK
Sbjct: 240 LXKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQHALSLYFDMNRWK 299



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 83/310 (26%), Positives = 143/310 (46%), Gaps = 36/310 (11%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           FVE D  T   ++  FC  G +  +  ++++  ++  + D      +I GL +   +++A
Sbjct: 90  FVE-DSITYGILVHGFCKNGYIDKSLHVLEMAEQKGGVVDAFAYSAMINGLCKEANLDRA 148

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             VL  M+ SG  P+   YN ++ GL    +   AI +  EM    C P +ITYNT++  
Sbjct: 149 VCVLNGMIKSGCKPNAHVYNTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLING 208

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  N  F +A    K+ L KG  P +ITY++L + +C    + +A+++ + +  +G  PD
Sbjct: 209 LCKNEMFGEAYNLVKELLDKGLNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKGFKPD 268

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +  +N L++  C  GK   A+ +  ++      PN +++NTL+      G         D
Sbjct: 269 VQMHNILIHGLCSVGKMQHALSLYFDMNRWKCAPNLVSHNTLMEGFYKDG---------D 319

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           I N       V    IL NGL                     +PDI++YN  L  LC   
Sbjct: 320 IRN-----ALVIWARILRNGL---------------------EPDIISYNITLKGLCSCN 353

Query: 412 MLNEALQLLH 421
            +++A+  LH
Sbjct: 354 RISDAILFLH 363



 Score = 87.8 bits (216), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 101/209 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++       K  DA ++   M   +  P       LI GL + +   +A  +++ ++ 
Sbjct: 168 NTLINGLVGASKFEDAIRVFREMGTMHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLD 227

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  ITY+M+  GLC   ++  A+ L ++++  G +PDV  +N ++  +   GK + 
Sbjct: 228 KGLNPGVITYSMLXKGLCLDHKVEKALQLWNQVTSKGFKPDVQMHNILIHGLCSVGKMQH 287

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  + D  R  C P L+++  L+E   K   I  A+ +   +   G  PDI++YN  + 
Sbjct: 288 ALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLK 347

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
             C   +  DA+L +++ +++ +    IT
Sbjct: 348 GLCSCNRISDAILFLHDAVTKKIVLTKIT 376


>gi|147841407|emb|CAN66681.1| hypothetical protein VITISV_005087 [Vitis vinifera]
          Length = 882

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 195/376 (51%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           +N+++ G C+ G+I  A+ LL+ M   G  PD++TYNT++      G    A     +  
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
                P +ITYT LI+  CK   +  A+ + D+M ++   PD+VTY  ++N  CK GK +
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A  V   +   G+ PN  +Y TL+ SL   G       +   M        V  Y  L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +GL K G+ + A + F  ++ ++  P+ VTY+ ++   CK G +N+   LL  +      
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P +I Y++++DG  KKG + +AM +  +M++  I P+   + TLI G+ +ADQ   A+DL
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            KE+  RG +  N      ++ L +S +++ A ++ + M+S    PD   +++++     
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 550 DGMTEEAYKLWQKLIE 565
            G   +A+ + Q++ E
Sbjct: 380 AGKESDAFNIAQEMTE 395



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 219/461 (47%), Gaps = 11/461 (2%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           P +    +  N ++  +C  G+++ A +L++ M      PD      L+ G  +I  +  
Sbjct: 11  PEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFT 70

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A K++  + +    P+ ITY  ++   CK   +  A+ + DEM+V    PDV+TY  I+ 
Sbjct: 71  AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +  +GK ++A   +++    G  P   +Y  LI+ + K+  +A A  +   M + G   
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+V Y +L++   K G  ++A  +   LL   + PN +TY+ L+      G  +  + +L
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M E    P V  Y+ +++G  K GL++ A++   +MV +N  P++  Y T++    K 
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
                AL L   +            ++ ++ L + G ME+A  L+  MM  G+ PD + +
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-----SKKVDMAIQVL 525
            +++ GF +A +  +A ++ +E+ ++ +     AY ++I+GL K     S+     ++ L
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            L       PD   F+T++     +G    A KL  ++  +
Sbjct: 431 GL------APDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465



 Score =  169 bits (429), Expect = 3e-39,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 212/444 (47%), Gaps = 7/444 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+  +  +G L +A  ++  M +RN +P+      LI G  + D+   A  + + M   G
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +    +  V  L + G++  A  L  +M   G  PD + Y +++   F  GK   A 
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++   K     ++ Y +LI  + K  G   +      M   G +PD  T+N+++N  
Sbjct: 388 NIAQEMTEKSSGFDVVAYNVLINGLFK-LGKYESESFHTGMRQLGLAPDSATFNTMINAY 446

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE---ASHS 359
           CK+G   +A+ ++N + S G++PNSIT N L+  L + G    ++K +D++N+       
Sbjct: 447 CKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG---EIEKTMDLLNDMLVMGFH 503

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           PT  T+  +++   K    D  ++  +Q+V    + D+ TYNT++   C+ GM+  A  +
Sbjct: 504 PTPTTHKAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLV 563

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              + G      +ITYN LI G      ++KA  ++ QM+  G+SP+  T+  L+ G   
Sbjct: 564 FKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSA 623

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A  ++EA  L+ ++ +RG     + Y +++ G  K   +   +++   MI+  + P    
Sbjct: 624 ARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRT 683

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           ++ ++   A      +A +L Q++
Sbjct: 684 YNVLISCFAKGKKMSQAKELMQEM 707



 Score =  164 bits (414), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 117/468 (25%), Positives = 218/468 (46%), Gaps = 17/468 (3%)

Query: 120 NNKILQNFCSR----GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           NN ++ +F +     G++ +A +L   M  R  +PD     +++ G  +  +   A  + 
Sbjct: 331 NNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIA 390

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M       D + YN+++ GL K G+  S  +    M   G  PD  T+NT++      
Sbjct: 391 QEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKE 449

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A+    +    G  P  IT  IL++++C    I + +++L+DM + G  P   T+
Sbjct: 450 GNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTH 509

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            ++++ S K  + D  +   + L+  G++ +  TYNTL+ +    G       +   M  
Sbjct: 510 KAVLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMG 569

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 + TYN LI+G C    + +A    +QM+++   P++ TYN +LG L    ++ E
Sbjct: 570 KGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE 629

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L++ +      P   TY+ L+ G  K G M++ + LY +M+  G  P   T+  LI 
Sbjct: 630 AAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLIS 689

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-SKKVDM-----------AIQ 523
            F +  ++ +A +L++E+  RG    +S Y ++I G  K SK+ ++           A +
Sbjct: 690 CFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKR 749

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEK 571
           + E M    + P +   + I   +A  G   +A ++  KL + K  ++
Sbjct: 750 LFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKTVQE 797



 Score =  143 bits (361), Expect = 2e-31,   Method: Compositional matrix adjust.
 Identities = 113/487 (23%), Positives = 206/487 (42%), Gaps = 36/487 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ +    G + +A  L   M  R    D      L+ GL +      A  + Q+++   
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VP+ +TY+ ++ G CK G +     LL EM      P+VI Y++I+      G   +A+
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCK--QCGIA-------------------------- 274
              +  +++   P +  Y  LI+   K  Q GIA                          
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 275 -------RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                   A E+  DM   G  PD V Y S+++   K GK  DA  +   +  +    + 
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           + YN L++ L   G +++ +     M +   +P   T+N +IN  CK G +  A+   N+
Sbjct: 403 VAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M S   +P+ +T N ++  LC  G + + + LL+ +      P   T+  ++D  +K   
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            +  +  + Q++  G+  D  T+ TLI  FCR   +  A  + K++  +G       Y  
Sbjct: 522 ADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +IHG C S  +  A  V   M++    P+   ++ ++  ++   + +EA  L  ++ E  
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 568 VFEKGTT 574
           +    TT
Sbjct: 642 LVPNATT 648



 Score =  117 bits (294), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 165/386 (42%), Gaps = 13/386 (3%)

Query: 74  DQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPF-VENDEKTNNKILQNFCSRGK 132
           +  E SS   V+A N  + GL    K    S  +      +  D  T N ++  +C  G 
Sbjct: 392 EMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGN 451

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L +A KL++ M      P+   C  L++ L     IEK   +L  M++ G  P   T+  
Sbjct: 452 LGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKA 511

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++    K  +    +   D++   G + D+ TYNT++ T    G  ++A   +KD + KG
Sbjct: 512 VLDASSKSRRADVILHXHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKG 571

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
               +ITY  LI   C    + +A  V   M  EG SP++ TYN L+          +A 
Sbjct: 572 ILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAA 631

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            ++N +  RG+ PN+ TY+ L+   G  G      K+   M      P   TYN+LI+  
Sbjct: 632 GLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCF 691

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA---LCKEGMLN---------EALQLL 420
            K   + +A     +M  +   P+  TY+ ++     L K+  LN         EA +L 
Sbjct: 692 AKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLF 751

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKG 446
             +N     PC  T   +   LAK G
Sbjct: 752 EEMNEKGFIPCENTLACISFTLAKPG 777



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           +N L+      G      ++L+ M     +P + TYN L+NG CK G +  A     ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
             N +P+++TY T++ A CK   L +AL +   +   S  P ++TY  +++GL K G +E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A  ++ +M E G+ P+  ++ TLI    +   V EA  L   +  RG       Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            GL K+   + A  + ++++     P+   +S ++      G   +   L Q++ E  +F
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259


>gi|357439849|ref|XP_003590202.1| Pentatricopeptide repeat protein [Medicago truncatula]
 gi|355479250|gb|AES60453.1| Pentatricopeptide repeat protein [Medicago truncatula]
          Length = 772

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 128/460 (27%), Positives = 220/460 (47%), Gaps = 38/460 (8%)

Query: 123 ILQNFCSRGKLTDAS-KLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +L   CS  +L D + ++ D +  +  + +   C  L+  L R   ++   +    MV S
Sbjct: 150 MLFRVCSDNRLFDETIRVYDYVEEKGLVIEERSCFVLLLALKRCGEVDFCVRFFHRMVES 209

Query: 182 GGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSG-CEPDVITYNTIL---------- 229
                 + +  +++  LC+RG++  A  L+DEM   G  +P+V TYNT+L          
Sbjct: 210 NKFEIRVQSLTLVIDVLCRRGEVEKAKELMDEMVGKGIVKPNVFTYNTLLNAYVGRKDRK 269

Query: 230 ------------RTMFD-------------NGKFKQAIGFWKDQLRKGCPPYLITYTILI 264
                       + +F              +G  ++A   +++   K     +  Y+ +I
Sbjct: 270 GVDEILKLMEKEQVVFSVATYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMI 329

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
               +   + RA  + D+M+     P+  TY +L+   CK G+ + A +++  + S+G++
Sbjct: 330 SWSRRLGNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVD 389

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            N + +NT +     RG  D   ++  IM +   +  VFTYNIL NGLCK    D A   
Sbjct: 390 LNLVIFNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCI 449

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
            N MV K  +P++VT+   +   CKEG L EA +L   +      P +ITYNTLID   K
Sbjct: 450 LNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCK 509

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
           K  +++A  +  +M+  G+ PD  T+ +LI G C   +V+EA+ L  E+  +G     + 
Sbjct: 510 KEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVAT 569

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIV 544
           Y  +I GL K  + D A ++ + M+     PDD VF+++V
Sbjct: 570 YTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLV 609



 Score =  159 bits (402), Expect = 4e-36,   Method: Compositional matrix adjust.
 Identities = 93/359 (25%), Positives = 178/359 (49%), Gaps = 35/359 (9%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++Q + S G + +A K+ + M  +N   D +   ++I    R+  +++A  +   M
Sbjct: 289 TYSILIQWYSSSGDIEEAEKIFEEMREKNIEMDVYVYSSMISWSRRLGNMKRAFALFDEM 348

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
                VP+  TY  ++GG+CK GQ+ +A  LL EM   G + +++ +NT +         
Sbjct: 349 SQRDIVPNAHTYGALIGGVCKAGQMEAAEILLLEMQSKGVDLNLVIFNTTM--------- 399

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
                                     +  C++  +  A+ +   M  +G + D+ TYN L
Sbjct: 400 --------------------------DGYCRRGKMDEALRLQAIMEKKGINADVFTYNIL 433

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
            N  CK  +YD+A  ++N+++ +G++PN +T+   +      G     +++   M +   
Sbjct: 434 ANGLCKLHRYDEAKCILNSMVEKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGE 493

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P + TYN LI+  CK   V +A    ++M++K   PD+ TY++++   C  G ++EAL+
Sbjct: 494 VPNIITYNTLIDAYCKKEKVKQAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALK 553

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           L + +     +  + TY ++I GL+K+G  ++A  LY +MM+ G+ PDD    +L+  F
Sbjct: 554 LFNEMRLKGITRNVATYTSMISGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSF 612



 Score =  137 bits (346), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 81/280 (28%), Positives = 149/280 (53%), Gaps = 2/280 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVP-DTIT 189
           G +  A  L D M++R+ +P+ H    LI G+ +  ++E A+++L + + S GV  + + 
Sbjct: 336 GNMKRAFALFDEMSQRDIVPNAHTYGALIGGVCKAGQME-AAEILLLEMQSKGVDLNLVI 394

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           +N  + G C+RG++  A+ L   M   G   DV TYN +   +    ++ +A       +
Sbjct: 395 FNTTMDGYCRRGKMDEALRLQAIMEKKGINADVFTYNILANGLCKLHRYDEAKCILNSMV 454

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
            KG  P ++T+T+ IE  CK+  +A A  +  DM  +G  P+I+TYN+L++  CK+ K  
Sbjct: 455 EKGVKPNVVTFTMFIEIYCKEGNLAEAERLFRDMEKKGEVPNIITYNTLIDAYCKKEKVK 514

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A  + + ++++G+ P+  TY++L+H     G  D   K+ + M     +  V TY  +I
Sbjct: 515 QAHKIKSEMINKGLLPDLYTYSSLIHGECIVGRVDEALKLFNEMRLKGITRNVATYTSMI 574

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCK 409
           +GL K G  D A   +++M+     PD   + +++G+  K
Sbjct: 575 SGLSKEGRADEAFKLYDEMMKIGLIPDDRVFTSLVGSFHK 614


>gi|357499781|ref|XP_003620179.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
 gi|355495194|gb|AES76397.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
          Length = 517

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 107/410 (26%), Positives = 208/410 (50%), Gaps = 10/410 (2%)

Query: 166 DRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITY 225
           + ++ A  +   ++     P  I +N ++G L K     + + L  +M   G +P+++  
Sbjct: 41  NDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPNLVNC 100

Query: 226 NTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC-------KQCGIAR--- 275
           N ++ +    G    A       L+ G  P  IT   LI+ +C       K C + +   
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKD 160

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A+++ + M +E  +PD+ T+  LV+  CK+G+  +A  V+  ++ +G++P  +TYN+L+ 
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQP 395
                   +    I + M +   SP + +Y+ILING CK  ++D A+    +M  K   P
Sbjct: 221 GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIP 280

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           ++VTY++++  LCK G ++ AL+L+  ++     P ++TY++++D L K   ++ A+ L 
Sbjct: 281 NVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALL 340

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            QM   GI P+  T+  LI G C++ ++E+A  + +++  +G+ +    Y ++I G C  
Sbjct: 341 TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDK 400

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              D A+ +L  M  +   P+   +  I+  +      E A KL  ++IE
Sbjct: 401 GLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 114/417 (27%), Positives = 206/417 (49%), Gaps = 10/417 (2%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           F +   + DA  L + + ++N  P       ++  L++         + Q M   G  P+
Sbjct: 37  FHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLSQKMEFRGIKPN 96

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK--------- 237
            +  N+++   C+ G I SA ++L ++   G +P+ IT NT+++ +  NGK         
Sbjct: 97  LVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVG 156

Query: 238 -FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
             K A+  +   + +   P + T+TIL++  CK+  +  A  VL  M I+G  P +VTYN
Sbjct: 157 KLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYN 216

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL++      + + A  + N +   G+ P+  +Y+ L++        D   ++L  M+  
Sbjct: 217 SLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHK 276

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P V TY+ LI+GLCK G +  A+   ++M  +   P+IVTY+++L ALCK   ++ A
Sbjct: 277 QIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNA 336

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           + LL  +      P + TY  LI GL + G +E A  ++  ++  G + +  T+  +I G
Sbjct: 337 IALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQG 396

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           FC     +EA+ LL ++   G       Y ++I  L K  + +MA ++L  MI + +
Sbjct: 397 FCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIETNF 453



 Score =  164 bits (415), Expect = 1e-37,   Method: Compositional matrix adjust.
 Identities = 100/350 (28%), Positives = 177/350 (50%), Gaps = 10/350 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR----------IDRIEK 170
           N ++ +FC  G +  A  ++  + +    P+      LI+GL            + +++ 
Sbjct: 101 NILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLNGKIHDKHCIVGKLKD 160

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A  +   M++    PD  T+ ++V G CK G+++ A  +L  M + G +P V+TYN+++ 
Sbjct: 161 AVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMD 220

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
             F   +  +A   +    + G  P + +Y+ILI   CK   +  A+E+L +M  +   P
Sbjct: 221 GYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMDEAMELLKEMHHKQIIP 280

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           ++VTY+SL++  CK GK   A+ +++ +  RG  PN +TY+++L +L      D    +L
Sbjct: 281 NVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSILDALCKNHQVDNAIALL 340

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M      P ++TY ILI GLC+ G ++ A   F  ++ K    ++ TY  ++   C +
Sbjct: 341 TQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHNLNVYTYTVMIQGFCDK 400

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           G+ +EAL LL  +  + C P   TY  +I  L KK   E A  L  +M+E
Sbjct: 401 GLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKLLCEMIE 450



 Score =  157 bits (398), Expect = 1e-35,   Method: Compositional matrix adjust.
 Identities = 89/301 (29%), Positives = 159/301 (52%)

Query: 120 NNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N KI    C  GKL DA  L + M   N  PD +    L+ G  +  R+++A  VL +M+
Sbjct: 145 NGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMM 204

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           + G  P  +TYN ++ G     Q+  A ++ + M+  G  PD+ +Y+ ++          
Sbjct: 205 IQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMD 264

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A+   K+   K   P ++TY+ LI+ +CK   I+ A++++D+M   G  P+IVTY+S++
Sbjct: 265 EAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL 324

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK  + D+A+ ++  + ++G++PN  TY  L+  L   G  +   K+ + +    H+
Sbjct: 325 DALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLLVKGHN 384

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
             V+TY ++I G C  GL D A+   ++M    C P+  TY  ++ +L K+     A +L
Sbjct: 385 LNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEIIILSLFKKDENEMAEKL 444

Query: 420 L 420
           L
Sbjct: 445 L 445



 Score =  153 bits (386), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 97/355 (27%), Positives = 175/355 (49%), Gaps = 12/355 (3%)

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           + I Y +   T  +N     A+  +   L++   P  I +  ++  + K       + + 
Sbjct: 26  NFIPYFSTSTTFHNNNDVDDAVSLFNRLLQQNPTPPNIEFNKILGSLVKSKHYHTVLYLS 85

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
             M   G  P++V  N L+N  C+ G    A  V+  +L  G +PN+IT NTL+  L   
Sbjct: 86  QKMEFRGIKPNLVNCNILINSFCQLGHIPSAFSVLTKILKMGYKPNTITLNTLIKGLCLN 145

Query: 341 G-----------CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           G             DAVD + + M   + +P V+T+ IL++G CK G V  A N    M+
Sbjct: 146 GKIHDKHCIVGKLKDAVD-LFNKMILENINPDVYTFTILVDGFCKEGRVKEAKNVLAMMM 204

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
            +  +P +VTYN+++        +N+A  + + +     SP + +Y+ LI+G  K   M+
Sbjct: 205 IQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQSYSILINGFCKIKMMD 264

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +AM L  +M    I P+ +T+ +LI G C++ ++  A+ L+ E+  RG       Y  ++
Sbjct: 265 EAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEMHDRGQPPNIVTYSSIL 324

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
             LCK+ +VD AI +L  M +   +P+   ++ ++K +   G  E+A K+++ L+
Sbjct: 325 DALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKLEDARKVFEDLL 379



 Score =  129 bits (323), Expect = 6e-27,   Method: Compositional matrix adjust.
 Identities = 84/343 (24%), Positives = 160/343 (46%), Gaps = 12/343 (3%)

Query: 81  ESHVLAVNKKLRGLTITKKSHDP---------SLPSSDGPFVEN---DEKTNNKILQNFC 128
           + + + +N  ++GL +  K HD          ++   +   +EN   D  T   ++  FC
Sbjct: 129 KPNTITLNTLIKGLCLNGKIHDKHCIVGKLKDAVDLFNKMILENINPDVYTFTILVDGFC 188

Query: 129 SRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTI 188
             G++ +A  ++ +M  +   P      +L+ G   + ++ KA  +   M   G  PD  
Sbjct: 189 KEGRVKEAKNVLAMMMIQGIKPGVVTYNSLMDGYFLVKQVNKAKSIFNTMAQLGVSPDIQ 248

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
           +Y++++ G CK   +  A+ LL EM      P+V+TY++++  +  +GK   A+    + 
Sbjct: 249 SYSILINGFCKIKMMDEAMELLKEMHHKQIIPNVVTYSSLIDGLCKSGKISYALKLVDEM 308

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
             +G PP ++TY+ +++ +CK   +  AI +L  M  +G  P++ TY  L+   C+ GK 
Sbjct: 309 HDRGQPPNIVTYSSILDALCKNHQVDNAIALLTQMKNQGIQPNMYTYTILIKGLCQSGKL 368

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
           +DA  V  +LL +G   N  TY  ++     +G +D    +L  M +    P   TY I+
Sbjct: 369 EDARKVFEDLLVKGHNLNVYTYTVMIQGFCDKGLFDEALTLLSKMEDNGCIPNAKTYEII 428

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           I  L K    + A     +M+  N    +   N ++ ++   G
Sbjct: 429 ILSLFKKDENEMAEKLLCEMIETNFDGRVALTNDLIASIWVTG 471


>gi|413916119|gb|AFW56051.1| hypothetical protein ZEAMMB73_517553 [Zea mays]
          Length = 663

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/355 (32%), Positives = 180/355 (50%), Gaps = 2/355 (0%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           LI GL+    ++K   +   M   G +P  +TYN M+ GL + GQI +A A   EM   G
Sbjct: 308 LITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMG 367

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
             PDVITYN++L      G  K+A+  + D  R G  P ++TY ILI+  C+   +  A 
Sbjct: 368 LLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEAR 427

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
            + ++M  +GC PD+ TY  L+  S             + +LS+G+ P+   YNT + + 
Sbjct: 428 RLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAE 487

Query: 338 GSRGCWDAVDKILD-IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
            + G      ++ + IM E   S TV TYNILI+GLCK G +  A     QM+S   QPD
Sbjct: 488 ITLGDISKSFQLREVIMLEGISSDTV-TYNILIDGLCKTGNLKDAEELMMQMISNGLQPD 546

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
            +TY  ++ A C+ G L EA +  + +      P  +TY  +I    ++G +  A   + 
Sbjct: 547 CITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFR 606

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
           +M+E G+ P++IT+  LI   CR  + + A     E+ +RG       Y L+I G
Sbjct: 607 KMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score =  175 bits (444), Expect = 5e-41,   Method: Compositional matrix adjust.
 Identities = 124/455 (27%), Positives = 215/455 (47%), Gaps = 3/455 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D K  NK+L+      +  D S +   M +    P       L+    +  R +K  
Sbjct: 192 VAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDSFSKEGRKDKID 251

Query: 173 KVLQIMVMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
            +L+ M   G   +P+ +TYN+++ GL ++G +  A  L++EM +S  +    TYN ++ 
Sbjct: 252 MLLKEMEARGSSCLPNDVTYNVVIAGLARKGYLEEAAELVEEMRLSK-KASSFTYNPLIT 310

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +   G  K+      +   +G  P ++TY  +I  + +   I  A     +M   G  P
Sbjct: 311 GLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEMRAMGLLP 370

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D++TYNSL+N  CK G   +A+L+  +L   G+ P  +TYN L+      G  +   ++ 
Sbjct: 371 DVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLK 430

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
           + M E    P V+TY IL+ G      +      F++M+SK  +PD   YNT + A    
Sbjct: 431 EEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTRICAEITL 490

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
           G ++++ QL  ++     S   +TYN LIDGL K G ++ A  L  QM+ NG+ PD IT+
Sbjct: 491 GDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDCITY 550

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMIS 530
             LI   C    + EA     ++   G       Y ++IH  C+   +  A      M+ 
Sbjct: 551 TCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRKMLE 610

Query: 531 SRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              +P++  ++ ++  +   G T+ AY+ + +++E
Sbjct: 611 EGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLE 645



 Score =  162 bits (409), Expect = 7e-37,   Method: Compositional matrix adjust.
 Identities = 101/358 (28%), Positives = 164/358 (45%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++    +RG +     L   M     +P       +I GL++  +IE A      M
Sbjct: 304 TYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAKFVEM 363

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              G +PD ITYN ++ G CK G  + A+ L  ++  +G  P V+TYN ++      G  
Sbjct: 364 RAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDL 423

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A    ++ + +GC P + TYTIL++     C +A   E  D+M  +G  PD   YN+ 
Sbjct: 424 EEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFAYNTR 483

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +      G    +  +   ++  G+  +++TYN L+  L   G     ++++  M     
Sbjct: 484 ICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGL 543

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   TY  LI+  C+ G +  A   FN M+S    P  VTY  ++ A C+ G L  A  
Sbjct: 544 QPDCITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYG 603

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
               +      P  ITYN LI  L + G  + A   + +M+E G+ P+  T+  LI G
Sbjct: 604 WFRKMLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLIDG 661



 Score =  150 bits (380), Expect = 1e-33,   Method: Compositional matrix adjust.
 Identities = 109/395 (27%), Positives = 178/395 (45%), Gaps = 38/395 (9%)

Query: 207 IALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQ 266
           ++   EM+  G  PDV   N +LR + D  ++        + L+ G  P ++TY  L++ 
Sbjct: 181 LSAFREMASHGVAPDVKDCNKVLRVLRDAARWDDMSAVHAEMLQLGIEPSIVTYNTLLDS 240

Query: 267 VCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
             K+    +   +L +M   G  C P+ VTYN ++    ++G Y +    +   +    +
Sbjct: 241 FSKEGRKDKIDMLLKEMEARGSSCLPNDVTYNVVIAGLARKG-YLEEAAELVEEMRLSKK 299

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            +S TYN L+  L +RG    VD +   M      PTV TYN +I+GL + G ++ A   
Sbjct: 300 ASSFTYNPLITGLLARGFVKKVDDLQLEMENEGIMPTVVTYNAMIHGLLQSGQIEAAQAK 359

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
           F +M +    PD++TYN++L   CK G   EAL L   L  +  +P ++TYN LIDG  +
Sbjct: 360 FVEMRAMGLLPDVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCR 419

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWG---FCRADQVEEAVDLLKEIGKR----- 496
            G +E+A  L  +M+E G  PD  T+  L+ G    C      E  D +   G R     
Sbjct: 420 LGDLEEARRLKEEMVEQGCLPDVYTYTILMKGSHNVCSLAMTREFFDEMLSKGLRPDCFA 479

Query: 497 ---------------------------GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMI 529
                                      G       Y ++I GLCK+  +  A +++  MI
Sbjct: 480 YNTRICAEITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMI 539

Query: 530 SSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           S+  +PD   ++ ++    + G   EA K +  +I
Sbjct: 540 SNGLQPDCITYTCLIHAHCERGFLREARKFFNDMI 574



 Score =  132 bits (331), Expect = 7e-28,   Method: Compositional matrix adjust.
 Identities = 82/292 (28%), Positives = 135/292 (46%), Gaps = 6/292 (2%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T N +L  +C  G   +A  L   + R    P       LI G  R+  +E+A ++ 
Sbjct: 371 DVITYNSLLNGYCKAGNQKEALLLFGDLRRAGLAPTVLTYNILIDGYCRLGDLEEARRLK 430

Query: 176 QIMVMSGGVPDTITYNMMVGG---LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           + MV  G +PD  TY +++ G   +C     R      DEM   G  PD   YNT +   
Sbjct: 431 EEMVEQGCLPDVYTYTILMKGSHNVCSLAMTRE---FFDEMLSKGLRPDCFAYNTRICAE 487

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G   ++    +  + +G     +TY ILI+ +CK   +  A E++  M   G  PD 
Sbjct: 488 ITLGDISKSFQLREVIMLEGISSDTVTYNILIDGLCKTGNLKDAEELMMQMISNGLQPDC 547

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           +TY  L++  C++G   +A    N+++S G+ P+++TY  ++H+   RG   +       
Sbjct: 548 ITYTCLIHAHCERGFLREARKFFNDMISDGLPPSAVTYTVIIHAYCRRGNLYSAYGWFRK 607

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
           M E    P   TYN+LI+ LC+ G    A   F +M+ +   P+  TY  ++
Sbjct: 608 MLEEGVEPNEITYNVLIHALCRMGRTQLAYRHFYEMLERGLVPNKYTYTLLI 659


>gi|297744958|emb|CBI38550.3| unnamed protein product [Vitis vinifera]
          Length = 795

 Score =  187 bits (476), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/376 (29%), Positives = 195/376 (51%)

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           +N+++ G C+ G+I  A+ LL+ M   G  PD++TYNT++      G    A     +  
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
                P +ITYT LI+  CK   +  A+ + D+M ++   PD+VTY  ++N  CK GK +
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +A  V   +   G+ PN  +Y TL+ SL   G       +   M        V  Y  L+
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +GL K G+ + A + F  ++ ++  P+ VTY+ ++   CK G +N+   LL  +      
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P +I Y++++DG  KKG + +AM +  +M++  I P+   + TLI G+ +ADQ   A+DL
Sbjct: 260 PNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDL 319

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
            KE+  RG +  N      ++ L +S +++ A ++ + M+S    PD   +++++     
Sbjct: 320 FKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFK 379

Query: 550 DGMTEEAYKLWQKLIE 565
            G   +A+ + Q++ E
Sbjct: 380 AGKESDAFNIAQEMTE 395



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 113/461 (24%), Positives = 219/461 (47%), Gaps = 11/461 (2%)

Query: 111 PFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEK 170
           P +    +  N ++  +C  G+++ A +L++ M      PD      L+ G  +I  +  
Sbjct: 11  PEIRRSVEHFNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFT 70

Query: 171 ASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILR 230
           A K++  + +    P+ ITY  ++   CK   +  A+ + DEM+V    PDV+TY  I+ 
Sbjct: 71  AKKLMGEISLVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMN 130

Query: 231 TMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSP 290
            +  +GK ++A   +++    G  P   +Y  LI+ + K+  +A A  +   M + G   
Sbjct: 131 GLCKSGKVEEAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGF 190

Query: 291 DIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKIL 350
           D+V Y +L++   K G  ++A  +   LL   + PN +TY+ L+      G  +  + +L
Sbjct: 191 DVVVYTALMDGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLL 250

Query: 351 DIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKE 410
             M E    P V  Y+ +++G  K GL++ A++   +MV +N  P++  Y T++    K 
Sbjct: 251 QEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKA 310

Query: 411 GMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITH 470
                AL L   +            ++ ++ L + G ME+A  L+  MM  G+ PD + +
Sbjct: 311 DQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNY 370

Query: 471 RTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-----SKKVDMAIQVL 525
            +++ GF +A +  +A ++ +E+ ++ +     AY ++I+GL K     S+     ++ L
Sbjct: 371 TSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQL 430

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
            L       PD   F+T++     +G    A KL  ++  +
Sbjct: 431 GL------APDSATFNTMINAYCKEGNLGNALKLLNEMKSY 465



 Score =  169 bits (427), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 111/444 (25%), Positives = 212/444 (47%), Gaps = 7/444 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+  +  +G L +A  ++  M +RN +P+      LI G  + D+   A  + + M   G
Sbjct: 268 IVDGYTKKGLLNEAMDVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRG 327

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              +    +  V  L + G++  A  L  +M   G  PD + Y +++   F  GK   A 
Sbjct: 328 LEENNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAF 387

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
              ++   K     ++ Y +LI  + K  G   +      M   G +PD  T+N+++N  
Sbjct: 388 NIAQEMTEKSSGFDVVAYNVLINGLFK-LGKYESESFHTGMRQLGLAPDSATFNTMINAY 446

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE---ASHS 359
           CK+G   +A+ ++N + S G++PNSIT N L+  L + G    ++K +D++N+       
Sbjct: 447 CKEGNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAG---EIEKTMDLLNDMLVMGFH 503

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           PT  T+  +++   K    D  ++  +Q+V    + D+ TYNT++   C+ GM+  A  +
Sbjct: 504 PTPTTHKAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLV 563

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              + G      +ITYN LI G      ++KA  ++ QM+  G+SP+  T+  L+ G   
Sbjct: 564 FKDMMGKGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSA 623

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTV 539
           A  ++EA  L+ ++ +RG     + Y +++ G  K   +   +++   MI+  + P    
Sbjct: 624 ARLIKEAAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRT 683

Query: 540 FSTIVKKVADDGMTEEAYKLWQKL 563
           ++ ++   A      +A +L Q++
Sbjct: 684 YNVLISCFAKGKKMSQAKELMQEM 707



 Score =  165 bits (418), Expect = 6e-38,   Method: Compositional matrix adjust.
 Identities = 118/465 (25%), Positives = 218/465 (46%), Gaps = 17/465 (3%)

Query: 120 NNKILQNFCSR----GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           NN ++ +F +     G++ +A +L   M  R  +PD     +++ G  +  +   A  + 
Sbjct: 331 NNFVIDSFVNNLKRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIA 390

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           Q M       D + YN+++ GL K G+  S  +    M   G  PD  T+NT++      
Sbjct: 391 QEMTEKSSGFDVVAYNVLINGLFKLGKYESE-SFHTGMRQLGLAPDSATFNTMINAYCKE 449

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G    A+    +    G  P  IT  IL++++C    I + +++L+DM + G  P   T+
Sbjct: 450 GNLGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTH 509

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            ++++ S K  + D  + + + L+  G++ +  TYNTL+ +    G       +   M  
Sbjct: 510 KAVLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMG 569

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 + TYN LI+G C    + +A    +QM+++   P++ TYN +LG L    ++ E
Sbjct: 570 KGILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKE 629

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  L++ +      P   TY+ L+ G  K G M++ + LY +M+  G  P   T+  LI 
Sbjct: 630 AAGLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLIS 689

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK-SKKVDM-----------AIQ 523
            F +  ++ +A +L++E+  RG    +S Y ++I G  K SK+ ++           A +
Sbjct: 690 CFAKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKR 749

Query: 524 VLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           + E M    + P +   + I   +A  G   +A ++  KL + KV
Sbjct: 750 LFEEMNEKGFIPCENTLACISFTLAKPGKKADAQRILNKLYKKKV 794



 Score =  156 bits (395), Expect = 2e-35,   Method: Compositional matrix adjust.
 Identities = 107/446 (23%), Positives = 201/446 (45%), Gaps = 1/446 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T + ++   C  G +     L+  M  ++  P+     +++ G  +   + +A  V++ M
Sbjct: 229 TYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAMDVMRKM 288

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V    +P+   Y  ++ G  K  Q   A+ L  EM   G E +    ++ +  +  +G+ 
Sbjct: 289 VQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNLKRSGRM 348

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           ++A   +KD + +G  P  + YT +++   K    + A  +  +M  +    D+V YN L
Sbjct: 349 EEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDVVAYNVL 408

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N   K GKY+        +   G+ P+S T+NT++++    G      K+L+ M     
Sbjct: 409 INGLFKLGKYESESFH-TGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNEMKSYGL 467

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
            P   T NIL+  LC  G +++ ++  N M+     P   T+  VL A  K    +  L 
Sbjct: 468 KPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRRADVILH 527

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           +   L G      L TYNTLI    + G + +A +++  MM  GI  D IT+  LI G+C
Sbjct: 528 MHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNALIHGYC 587

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
            +  +++A  +  ++   G       Y +++ GL  ++ +  A  ++  M      P+ T
Sbjct: 588 ISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERGLVPNAT 647

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
            +  +V      G  +E  KL+ ++I
Sbjct: 648 TYDILVSGHGKIGNMKECVKLYCEMI 673



 Score =  144 bits (363), Expect = 1e-31,   Method: Compositional matrix adjust.
 Identities = 113/487 (23%), Positives = 207/487 (42%), Gaps = 36/487 (7%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++ +    G + +A  L   M  R    D      L+ GL +      A  + Q+++   
Sbjct: 163 LIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALMDGLFKAGMANNAEDMFQVLLEES 222

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VP+ +TY+ ++ G CK G +     LL EM      P+VI Y++I+      G   +A+
Sbjct: 223 LVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIFPNVIVYSSIVDGYTKKGLLNEAM 282

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCK--QCGIA-------------------------- 274
              +  +++   P +  Y  LI+   K  Q GIA                          
Sbjct: 283 DVMRKMVQRNILPNVFVYGTLIDGYFKADQRGIALDLFKEMKSRGLEENNFVIDSFVNNL 342

Query: 275 -------RAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
                   A E+  DM   G  PD V Y S+++   K GK  DA  +   +  +    + 
Sbjct: 343 KRSGRMEEADELFKDMMSRGLLPDRVNYTSMMDGFFKAGKESDAFNIAQEMTEKSSGFDV 402

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
           + YN L++ L   G +++ +     M +   +P   T+N +IN  CK G +  A+   N+
Sbjct: 403 VAYNVLINGLFKLGKYES-ESFHTGMRQLGLAPDSATFNTMINAYCKEGNLGNALKLLNE 461

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
           M S   +P+ +T N ++  LC  G + + + LL+ +      P   T+  ++D  +K   
Sbjct: 462 MKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKAVLDASSKSRR 521

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            +  + ++ Q++  G+  D  T+ TLI  FCR   +  A  + K++  +G       Y  
Sbjct: 522 ADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKGILADIITYNA 581

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           +IHG C S  +  A  V   M++    P+   ++ ++  ++   + +EA  L  ++ E  
Sbjct: 582 LIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAAGLVNQMKERG 641

Query: 568 VFEKGTT 574
           +    TT
Sbjct: 642 LVPNATT 648



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 104/386 (26%), Positives = 166/386 (43%), Gaps = 13/386 (3%)

Query: 74  DQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPF-VENDEKTNNKILQNFCSRGK 132
           +  E SS   V+A N  + GL    K    S  +      +  D  T N ++  +C  G 
Sbjct: 392 EMTEKSSGFDVVAYNVLINGLFKLGKYESESFHTGMRQLGLAPDSATFNTMINAYCKEGN 451

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           L +A KL++ M      P+   C  L++ L     IEK   +L  M++ G  P   T+  
Sbjct: 452 LGNALKLLNEMKSYGLKPNSITCNILVQRLCAAGEIEKTMDLLNDMLVMGFHPTPTTHKA 511

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           ++    K  +    + + D++   G + D+ TYNT++ T    G  ++A   +KD + KG
Sbjct: 512 VLDASSKSRRADVILHMHDQLVGMGVKLDLSTYNTLISTFCRLGMIRRATLVFKDMMGKG 571

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
               +ITY  LI   C    + +A  V   M  EG SP++ TYN L+          +A 
Sbjct: 572 ILADIITYNALIHGYCISSHLKKAFAVHSQMLTEGVSPNVETYNILLGGLSAARLIKEAA 631

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            ++N +  RG+ PN+ TY+ L+   G  G      K+   M      P   TYN+LI+  
Sbjct: 632 GLVNQMKERGLVPNATTYDILVSGHGKIGNMKECVKLYCEMITKGFVPKTRTYNVLISCF 691

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA---LCKEGMLN---------EALQLL 420
            K   + +A     +M  +   P+  TY+ ++     L K+  LN         EA +L 
Sbjct: 692 AKGKKMSQAKELMQEMQVRGIPPNSSTYDILICGWYKLSKQPELNKSLKRSYQAEAKRLF 751

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKG 446
             +N     PC  T   +   LAK G
Sbjct: 752 EEMNEKGFIPCENTLACISFTLAKPG 777



 Score = 99.0 bits (245), Expect = 6e-18,   Method: Compositional matrix adjust.
 Identities = 62/240 (25%), Positives = 115/240 (47%)

Query: 330 YNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMV 389
           +N L+      G      ++L+ M     +P + TYN L+NG CK G +  A     ++ 
Sbjct: 20  FNVLIDGYCRNGEISRAVELLEGMKTEGPAPDIVTYNTLMNGFCKIGDLFTAKKLMGEIS 79

Query: 390 SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCME 449
             N +P+++TY T++ A CK   L +AL +   +   S  P ++TY  +++GL K G +E
Sbjct: 80  LVNLEPNVITYTTLIDAYCKSQCLEDALYMYDEMTVKSLVPDVVTYTCIMNGLCKSGKVE 139

Query: 450 KAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVI 509
           +A  ++ +M E G+ P+  ++ TLI    +   V EA  L   +  RG       Y  ++
Sbjct: 140 EAKSVFREMEEVGVVPNRFSYATLIDSLFKEGNVAEAFVLQGRMVVRGIGFDVVVYTALM 199

Query: 510 HGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVF 569
            GL K+   + A  + ++++     P+   +S ++      G   +   L Q++ E  +F
Sbjct: 200 DGLFKAGMANNAEDMFQVLLEESLVPNCVTYSALIDGHCKLGDVNKGELLLQEMEEKHIF 259


>gi|300681579|emb|CBI75523.1| PPR repeat domain containing protein [Triticum aestivum]
          Length = 728

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 111/454 (24%), Positives = 219/454 (48%), Gaps = 2/454 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           V  +  T    L   C   ++  A   + ++ +R   P  ++C N +I G     ++ KA
Sbjct: 244 VRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGY-PCNNYCFNAVIHGFCHDGQVHKA 302

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +V   M   G VPD  +Y+++V GLCK+G + +   +L EM+ +G  P++++Y+++L  
Sbjct: 303 IEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHG 362

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   G+ + A   +K    +G     I Y+I++   C+   +    ++ +DM      PD
Sbjct: 363 LCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPD 422

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
              Y+SL+   C+  +  +A+ V   ++S G+ PN +T   L+H   + G        LD
Sbjct: 423 AYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLD 482

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            + +    P++ TY ++I+GLCK    +     F  M+ +   PD V Y+ ++    K  
Sbjct: 483 KVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKAL 542

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L EA +L + +      P + TY +LI+GL     + + M L+  M+  G++PD I + 
Sbjct: 543 DLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYT 602

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +LI  +C+   ++ A+++ +E+   G    +  Y  +I G  K   +D A   +E M++ 
Sbjct: 603 SLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNK 662

Query: 532 RYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
              P    ++ ++      G  ++A  ++  +++
Sbjct: 663 GLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQ 696



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 103/416 (24%), Positives = 191/416 (45%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  FC  G++  A ++ D M +   +PD H    L+ GL +   +     +L  M  
Sbjct: 287 NAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMAR 346

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           +G  P+ ++Y+ ++ GLC+ G++  A  L   +   G + D I Y+ +L     +   + 
Sbjct: 347 NGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEI 406

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
               W D +     P    Y+ LI   C+   +  A+EV + M  +G  P++VT   LV+
Sbjct: 407 CYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVH 466

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +G   +A L ++ +   G+ P+  TY  ++H L      + +  I   M +  + P
Sbjct: 467 GFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVP 526

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
               Y+I+I+G  K   +  A   + +MV +  +P+I TY +++  LC +  L E + L 
Sbjct: 527 DTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLF 586

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             + G   +P  I Y +LI    K+  M+ A+ ++ +M   G+S D   +  LI GF + 
Sbjct: 587 KHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREMETEGLSADSFVYTCLIGGFSKV 646

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
             ++ A   ++E+  +G       Y  +I G  K      A+ +   M+ +   PD
Sbjct: 647 LAMDGAQLFMEEMMNKGLTPTVVTYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702



 Score =  154 bits (388), Expect = 2e-34,   Method: Compositional matrix adjust.
 Identities = 100/416 (24%), Positives = 199/416 (47%), Gaps = 2/416 (0%)

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK--RGQIRSAIA 208
           +   C  L++ L+  ++I  A  +   M  SG  P+  +Y++++       +  +  A+ 
Sbjct: 175 ELQVCNFLLKRLVEGNQIMYARSLFDDMKSSGPSPNVYSYSVLMSMYTHGAKLCLEEALE 234

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           LL EM V G  P+  TY T L  +    + K A  F +   ++G P     +  +I   C
Sbjct: 235 LLSEMEVEGVRPNAATYATYLYGLCHAKQVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFC 294

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
               + +AIEV D M   G  PD+ +Y+ LV+  CKQG       ++  +   G+ PN +
Sbjct: 295 HDGQVHKAIEVFDGMKKCGFVPDVHSYSILVDGLCKQGDVLTGYYMLVEMARNGITPNLV 354

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           +Y++LLH L   G  +   ++   + +         Y+I+++G C++  ++   + +N M
Sbjct: 355 SYSSLLHGLCRAGRVELAFELFKRLKDQGFKHDHIVYSIVLHGCCQHLDLEICYDLWNDM 414

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           V  N  PD   Y++++ A C+   L EAL++  L+      P ++T   L+ G + +G +
Sbjct: 415 VHHNFVPDAYNYSSLIYAYCRHRQLKEALEVFELMVSDGICPNVVTCTILVHGFSNEGLI 474

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
            +A +   ++ + G+ P   T+R +I G C+ ++  +   +  ++ KRG       Y ++
Sbjct: 475 GEAFLFLDKVRQFGVVPSLCTYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSII 534

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           I G  K+  +  A ++   M+    KP+   +++++  +  D    E   L++ +I
Sbjct: 535 IDGFVKALDLQEAFRLYYKMVDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMI 590



 Score =  130 bits (328), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 91/353 (25%), Positives = 148/353 (41%), Gaps = 35/353 (9%)

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
           ++D    + +L   C    L     L + M   N +PD +   +LI    R  ++++A +
Sbjct: 385 KHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEALE 444

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
           V ++MV  G  P+ +T  ++V G    G I  A   LD++   G  P + TY  I+  + 
Sbjct: 445 VFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGVVPSLCTYRVIIHGLC 504

Query: 234 DNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIV 293
              K     G + D +++G  P  + Y+I+I+   K   +  A  +   M  EG  P+I 
Sbjct: 505 KVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKMVDEGTKPNIF 564

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY SL+N  C   K  + + +  +++  G+ P+ I Y +L+     R    A  +I   M
Sbjct: 565 TYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNMKAALEIFREM 624

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
                S   F Y  LI G  K   +D A     +M++K   P +V               
Sbjct: 625 ETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVV--------------- 669

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
                               TY  LI G  K G  +KAM +Y  M++ GI+PD
Sbjct: 670 --------------------TYTDLIVGYFKIGDEKKAMAMYNSMLQAGIAPD 702



 Score =  121 bits (304), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 80/347 (23%), Positives = 164/347 (47%), Gaps = 4/347 (1%)

Query: 224 TYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDM 283
            Y T++R   +   F+ A+  + +  + G    L     L++++ +   I  A  + DDM
Sbjct: 145 VYATVIRVFVELSMFEDALVTYVEAKKVGVE--LQVCNFLLKRLVEGNQIMYARSLFDDM 202

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS--RGMEPNSITYNTLLHSLGSRG 341
              G SP++ +Y+ L++      K      +         G+ PN+ TY T L+ L    
Sbjct: 203 KSSGPSPNVYSYSVLMSMYTHGAKLCLEEALELLSEMEVEGVRPNAATYATYLYGLCHAK 262

Query: 342 CWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYN 401
              +    L ++ +  +    + +N +I+G C  G V +AI  F+ M      PD+ +Y+
Sbjct: 263 QVKSAWNFLQMLCQRGYPCNNYCFNAVIHGFCHDGQVHKAIEVFDGMKKCGFVPDVHSYS 322

Query: 402 TVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMEN 461
            ++  LCK+G +     +L  +  +  +P L++Y++L+ GL + G +E A  L+ ++ + 
Sbjct: 323 ILVDGLCKQGDVLTGYYMLVEMARNGITPNLVSYSSLLHGLCRAGRVELAFELFKRLKDQ 382

Query: 462 GISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           G   D I +  ++ G C+   +E   DL  ++           Y  +I+  C+ +++  A
Sbjct: 383 GFKHDHIVYSIVLHGCCQHLDLEICYDLWNDMVHHNFVPDAYNYSSLIYAYCRHRQLKEA 442

Query: 522 IQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           ++V ELM+S    P+    + +V   +++G+  EA+    K+ ++ V
Sbjct: 443 LEVFELMVSDGICPNVVTCTILVHGFSNEGLIGEAFLFLDKVRQFGV 489



 Score = 81.6 bits (200), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 51/209 (24%), Positives = 92/209 (44%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T   I+   C   K  D   +   M +R  +PD      +I G ++   +++A ++   M
Sbjct: 495 TYRVIIHGLCKVNKPNDMWGIFADMIKRGYVPDTVLYSIIIDGFVKALDLQEAFRLYYKM 554

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           V  G  P+  TY  ++ GLC   ++   + L   M   G  PD I Y +++         
Sbjct: 555 VDEGTKPNIFTYTSLINGLCHDDKLPEVMTLFKHMIGEGLAPDRILYTSLIACYCKRSNM 614

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K A+  +++   +G       YT LI    K   +  A   +++M  +G +P +VTY  L
Sbjct: 615 KAALEIFREMETEGLSADSFVYTCLIGGFSKVLAMDGAQLFMEEMMNKGLTPTVVTYTDL 674

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           +    K G    A+ + N++L  G+ P++
Sbjct: 675 IVGYFKIGDEKKAMAMYNSMLQAGIAPDA 703


>gi|255574927|ref|XP_002528370.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
 gi|223532238|gb|EEF34042.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis]
          Length = 712

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 121/444 (27%), Positives = 213/444 (47%), Gaps = 1/444 (0%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++++F   GKL +A  ++  M     +        +I   + +  ++ A KV   M+   
Sbjct: 164 MVRSFSEIGKLKEAVNMVIEMQNHGLVLKARILNFVIDVALALGFVDYAEKVFDEMLDRA 223

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
            VPD+ +Y +MV G C+ G+I      L +M   G   D  T   ++ T  + G   +A 
Sbjct: 224 VVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATCTLMISTFSEKGFVNRAF 283

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
            ++K  ++ G  P LI ++ LI  +CK   I +A E+L++M  +G  P++ T+ +L++  
Sbjct: 284 WYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVRKGWKPNVYTHTALIDGL 343

Query: 303 CKQGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
           CK+G  + A  L +  + S   +PN  TY  +++        +  + +L  M E    P 
Sbjct: 344 CKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIRMKEQGLVPN 403

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
             TY  LI+G CK G   RA    + M  +   P+I TYN ++  LCK+G   EA +LL 
Sbjct: 404 TNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGRFPEAYKLLR 463

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
               S      +TY  LI    ++   ++A+ ++ +M + G+ PD  T+  LI  FCR  
Sbjct: 464 RGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNVLIATFCRQK 523

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           +VEE+  L +E    G       Y  +I G C+   +  AI+    M     KPD   + 
Sbjct: 524 KVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYGCKPDSITYG 583

Query: 542 TIVKKVADDGMTEEAYKLWQKLIE 565
            ++  + ++   +EA +L++ +I+
Sbjct: 584 ALISGLCNESKLDEACQLYETMID 607



 Score =  181 bits (460), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 110/434 (25%), Positives = 208/434 (47%), Gaps = 1/434 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITY 190
           G +  A K+ D M  R  +PD      ++ G  R+ RI    + L+ M+  G   D  T 
Sbjct: 207 GFVDYAEKVFDEMLDRAVVPDSTSYKLMVVGYCRMGRISDVDRWLKDMIERGYAVDNATC 266

Query: 191 NMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR 250
            +M+    ++G +  A     +    G  P++I +++++  +   G  KQA    ++ +R
Sbjct: 267 TLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEMLEEMVR 326

Query: 251 KGCPPYLITYTILIEQVCKQCGIARAIEV-LDDMAIEGCSPDIVTYNSLVNFSCKQGKYD 309
           KG  P + T+T LI+ +CK+    +A  + L  +  +   P++ TY  ++N  CK+ K +
Sbjct: 327 KGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLN 386

Query: 310 DAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
            A +++  +  +G+ PN+ TY  L+      G +    +++D+M +   +P +FTYN +I
Sbjct: 387 RAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAII 446

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           +GLCK G    A     + +      D VTY  ++   C++    +AL +   +      
Sbjct: 447 DGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQ 506

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
           P + TYN LI    ++  +E++  L+ + +  G+ P   T+ ++I G+CR   +  A+  
Sbjct: 507 PDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKF 566

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
             ++   G K  +  Y  +I GLC   K+D A Q+ E MI +   P +    T+  +   
Sbjct: 567 FHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCK 626

Query: 550 DGMTEEAYKLWQKL 563
            G +  A  + ++L
Sbjct: 627 QGDSATAMIILERL 640



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 114/407 (28%), Positives = 196/407 (48%), Gaps = 4/407 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   ++  F  +G +  A        +    P+     +LI GL +I  I++A ++L
Sbjct: 262 DNATCTLMISTFSEKGFVNRAFWYFKKWVQMGLNPNLINFSSLINGLCKIGSIKQAFEML 321

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFD 234
           + MV  G  P+  T+  ++ GLCK+G    A  L  ++  S   +P+V TY  ++     
Sbjct: 322 EEMVRKGWKPNVYTHTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCK 381

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             K  +A         +G  P   TYT LI+  CK     RA E++D M  EG +P+I T
Sbjct: 382 EEKLNRAEMLLIRMKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFT 441

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN++++  CK+G++ +A  ++   L  G+  + +TY  L+     +        I   M 
Sbjct: 442 YNAIIDGLCKKGRFPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMF 501

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +    P + TYN+LI   C+   V+ +   F + V     P   TY +++   C++G ++
Sbjct: 502 KVGLQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHIS 561

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A++  H +    C P  ITY  LI GL  +  +++A  LY  M++NG+SP ++T  TL 
Sbjct: 562 SAIKFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLA 621

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           + +C+      A+ +L+ + K   K+       +I  LC  KKV +A
Sbjct: 622 YEYCKQGDSATAMIILERLEK---KLWIRTVNTLIRKLCSEKKVGVA 665



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 170/378 (44%), Gaps = 4/378 (1%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARR-NQIPDFHFCINLIRGLIRIDRIEKASKVLQI 177
           T+  ++   C +G    A +L   + R  N  P+ +    +I G  + +++ +A  +L  
Sbjct: 335 THTALIDGLCKKGWTEKAFRLFLKLVRSDNYKPNVYTYTCMINGYCKEEKLNRAEMLLIR 394

Query: 178 MVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGK 237
           M   G VP+T TY  ++ G CK G    A  L+D M   G  P++ TYN I+  +   G+
Sbjct: 395 MKEQGLVPNTNTYTCLIDGHCKAGNFGRAYELMDLMGKEGFTPNIFTYNAIIDGLCKKGR 454

Query: 238 FKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNS 297
           F +A    +  L+ G     +TYTILI + C+Q    +A+ +   M   G  PD+ TYN 
Sbjct: 455 FPEAYKLLRRGLKSGLHADKVTYTILISEFCRQTDNKQALAIFSRMFKVGLQPDMHTYNV 514

Query: 298 LVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           L+   C+Q K +++  +    +  G+ P   TY +++      G   +  K    M +  
Sbjct: 515 LIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAIKFFHKMRDYG 574

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TY  LI+GLC    +D A   +  M+     P  VT  T+    CK+G    A+
Sbjct: 575 CKPDSITYGALISGLCNESKLDEACQLYETMIDNGLSPCEVTRVTLAYEYCKQGDSATAM 634

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
            +L  L        + T NTLI  L  +  +  A + + ++++  ++ D IT        
Sbjct: 635 IILERLEK---KLWIRTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRITLAAFTTAC 691

Query: 478 CRADQVEEAVDLLKEIGK 495
             +++     DL + I K
Sbjct: 692 YESNKFALVSDLSERISK 709



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 53/217 (24%), Positives = 85/217 (39%), Gaps = 38/217 (17%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T N ++  FC + K+ ++ KL +       +P      ++I G  R   I  A 
Sbjct: 505 LQPDMHTYNVLIATFCRQKKVEESEKLFEEAVGLGLLPTKETYTSMICGYCRDGHISSAI 564

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           K    M   G  PD+ITY  ++ GLC   ++  A  L +                   TM
Sbjct: 565 KFFHKMRDYGCKPDSITYGALISGLCNESKLDEACQLYE-------------------TM 605

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
            DN                G  P  +T   L  + CKQ   A A+ +L+ +  +     I
Sbjct: 606 IDN----------------GLSPCEVTRVTLAYEYCKQGDSATAMIILERLEKKLW---I 646

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
            T N+L+   C + K   A L  + LL + +  + IT
Sbjct: 647 RTVNTLIRKLCSEKKVGVAALFFHKLLDKDLNVDRIT 683


>gi|297807255|ref|XP_002871511.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
 gi|297317348|gb|EFH47770.1| hypothetical protein ARALYDRAFT_350399 [Arabidopsis lyrata subsp.
            lyrata]
          Length = 1202

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/432 (28%), Positives = 206/432 (47%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++   C   ++ DA +L D M  R  +P       LI G  +    EK+ KV + M  
Sbjct: 591  NVLIDGLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKA 650

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
                P  IT+N ++ GL K G +  A  +L EM   G  PD  T++ +      N K   
Sbjct: 651  DNIEPSLITFNTLLKGLFKAGMVEDAENVLTEMKDQGFVPDAFTFSILFDGYSSNDKADA 710

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A+G ++  +  G      T +IL+  +CK+  I +A E+L     +G  P+ V YN++++
Sbjct: 711  ALGVYETAVDSGLKMNAYTCSILLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMID 770

Query: 301  FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               ++G    A + I+ +  +GM+P+ + YN L+ +    G  +  ++ ++ M     SP
Sbjct: 771  GYSRKGDLVGARMKIDAMEKQGMKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSP 830

Query: 361  TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            +V TYNILI G  +    D+  +   +M      P++V+Y T++  LCK   L EA  + 
Sbjct: 831  SVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVK 890

Query: 421  HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              +     SP +  YN LIDG   KG +E A     +M + GI  + +T+ TLI G    
Sbjct: 891  RDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMN 950

Query: 481  DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
             ++ EA D+L EI ++G K     Y  +I G   +  V   I + E M +S  KP    +
Sbjct: 951  GKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTY 1010

Query: 541  STIVKKVADDGM 552
              ++     +G+
Sbjct: 1011 HLLISLCTKEGI 1022



 Score =  167 bits (423), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 110/395 (27%), Positives = 186/395 (47%), Gaps = 6/395 (1%)

Query: 123  ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            +L   C  G++  A +++     +  +P+      +I G  R   +  A   +  M   G
Sbjct: 733  LLNALCKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQG 792

Query: 183  GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              PD + YN ++   C+ G + +A   +++M + G  P V TYN ++       +F +  
Sbjct: 793  MKPDHLAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCF 852

Query: 243  GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
               K+    G  P +++Y  LI  +CK   +  A  V  DM   G SP++  YN L++  
Sbjct: 853  DLLKEMEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGC 912

Query: 303  CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
            C +GK +DA      +  +G+E N +TYNTL+  L   G     + +L  ++     P V
Sbjct: 913  CSKGKIEDAFRFSEEMFKKGIELNLVTYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDV 972

Query: 363  FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            FTYN LI+G    G V R I  + +M +   +P + TY+ ++    KEG     ++L   
Sbjct: 973  FTYNSLISGYRFAGNVQRCIALYEEMKTSGIKPTLKTYHLLISLCTKEG-----IELTKK 1027

Query: 423  LNGS-SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            + G  S  P L+ YN ++   A  G M+KA  L  QM+E  I  D  T+ +LI G  +  
Sbjct: 1028 IFGEMSLQPDLLVYNGVLHCYAVHGDMDKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVG 1087

Query: 482  QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
            ++ E   L+ E+  R  +     Y +++ G C+ K
Sbjct: 1088 KLCEVRSLIDEMKAREMEPEADTYDIIVKGHCEMK 1122



 Score =  145 bits (367), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 105/443 (23%), Positives = 193/443 (43%), Gaps = 5/443 (1%)

Query: 133 LTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNM 192
           +++A+ L   +      P       L+  L++  +      V   ++ S   P    Y  
Sbjct: 498 ISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRVTINVFLNILESDFRPSKFMYGK 557

Query: 193 MVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
            +    K   +   + L + M      P V  YN ++  +    + K A   + + L + 
Sbjct: 558 AIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLIDGLCKVRQMKDAEQLFDEMLARR 617

Query: 253 CPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAV 312
             P LITY  LI+  CK     ++ +V + M  +   P ++T+N+L+    K G  +DA 
Sbjct: 618 LLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEPSLITFNTLLKGLFKAGMVEDAE 677

Query: 313 LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGL 372
            V+  +  +G  P++ T++ L     S    DA   + +   ++      +T +IL+N L
Sbjct: 678 NVLTEMKDQGFVPDAFTFSILFDGYSSNDKADAALGVYETAVDSGLKMNAYTCSILLNAL 737

Query: 373 CKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCL 432
           CK G +++A     + ++K   P+ V YNT++    ++G L  A   +  +      P  
Sbjct: 738 CKEGQIEKAEEILGREMAKGLVPNEVLYNTMIDGYSRKGDLVGARMKIDAMEKQGMKPDH 797

Query: 433 ITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKE 492
           + YN LI    + G ME A     +M   G+SP   T+  LI G+ R  + ++  DLLKE
Sbjct: 798 LAYNCLIRTFCELGDMENAEQEVNKMKLKGVSPSVETYNILIGGYGRKYEFDKCFDLLKE 857

Query: 493 IGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGM 552
           +   G      +Y  +I+ LCK  K+  A  V   M      P+  +++ ++      G 
Sbjct: 858 MEDNGTMPNVVSYGTLINCLCKGSKLLEAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGK 917

Query: 553 TEEAYKLWQKLIEWKVFEKGTTL 575
            E+A++  +++     F+KG  L
Sbjct: 918 IEDAFRFSEEM-----FKKGIEL 935



 Score =  142 bits (359), Expect = 4e-31,   Method: Compositional matrix adjust.
 Identities = 100/378 (26%), Positives = 179/378 (47%), Gaps = 6/378 (1%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMV 179
            N ++  +  +G L  A   ID M ++   PD H   N LIR    +  +E A + +  M 
Sbjct: 766  NTMIDGYSRKGDLVGARMKIDAMEKQGMKPD-HLAYNCLIRTFCELGDMENAEQEVNKMK 824

Query: 180  MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
            + G  P   TYN+++GG  ++ +      LL EM  +G  P+V++Y T++  +    K  
Sbjct: 825  LKGVSPSVETYNILIGGYGRKYEFDKCFDLLKEMEDNGTMPNVVSYGTLINCLCKGSKLL 884

Query: 240  QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
            +A    +D   +G  P +  Y +LI+  C +  I  A    ++M  +G   ++VTYN+L+
Sbjct: 885  EAQIVKRDMEDRGVSPNVRIYNMLIDGCCSKGKIEDAFRFSEEMFKKGIELNLVTYNTLI 944

Query: 300  NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
            +     GK  +A  ++  +  +G++P+  TYN+L+      G       + + M  +   
Sbjct: 945  DGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEMKTSGIK 1004

Query: 360  PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
            PT+ TY++LI+ LC    ++     F +M   + QPD++ YN VL      G +++A  L
Sbjct: 1005 PTLKTYHLLIS-LCTKEGIELTKKIFGEM---SLQPDLLVYNGVLHCYAVHGDMDKAFNL 1060

Query: 420  LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
               +   S      TYN+LI G  K G + +   L  +M    + P+  T+  ++ G C 
Sbjct: 1061 QKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDIIVKGHCE 1120

Query: 480  ADQVEEAVDLLKEIGKRG 497
                  A    +E+ ++G
Sbjct: 1121 MKDYMGAYVWYREMQEKG 1138



 Score = 62.8 bits (151), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 48/205 (23%), Positives = 88/205 (42%), Gaps = 4/205 (1%)

Query: 119  TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            T N ++      GKL +A  ++  ++R+   PD     +LI G      +++   + + M
Sbjct: 939  TYNTLIDGLSMNGKLAEAEDMLLEISRKGLKPDVFTYNSLISGYRFAGNVQRCIALYEEM 998

Query: 179  VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
              SG  P   TY++++  LC +  I     +  EMS+   +PD++ YN +L     +G  
Sbjct: 999  KTSGIKPTLKTYHLLI-SLCTKEGIELTKKIFGEMSL---QPDLLVYNGVLHCYAVHGDM 1054

Query: 239  KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
             +A    K  + K       TY  LI    K   +     ++D+M      P+  TY+ +
Sbjct: 1055 DKAFNLQKQMIEKSIGLDKTTYNSLILGQLKVGKLCEVRSLIDEMKAREMEPEADTYDII 1114

Query: 299  VNFSCKQGKYDDAVLVINNLLSRGM 323
            V   C+   Y  A +    +  +G+
Sbjct: 1115 VKGHCEMKDYMGAYVWYREMQEKGL 1139



 Score = 60.1 bits (144), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 48/201 (23%), Positives = 86/201 (42%), Gaps = 3/201 (1%)

Query: 359 SPTV---FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           SP++   F+Y +L   L +  ++  A + F  + ++   P   +   +L  L K      
Sbjct: 476 SPSLKHDFSYLLLSVLLNESKMISEAADLFFALRNEGIFPSSDSLTLLLDHLVKTKQFRV 535

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
            + +   +  S   P    Y   I    K   + K + L+ +M  + ISP    +  LI 
Sbjct: 536 TINVFLNILESDFRPSKFMYGKAIQAAVKLSDVGKGLELFNRMKHDRISPTVFIYNVLID 595

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G C+  Q+++A  L  E+  R        Y  +I G CK    + + +V E M +   +P
Sbjct: 596 GLCKVRQMKDAEQLFDEMLARRLLPSLITYNTLIDGYCKDGNPEKSFKVRERMKADNIEP 655

Query: 536 DDTVFSTIVKKVADDGMTEEA 556
               F+T++K +   GM E+A
Sbjct: 656 SLITFNTLLKGLFKAGMVEDA 676


>gi|242051246|ref|XP_002463367.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
 gi|241926744|gb|EER99888.1| hypothetical protein SORBIDRAFT_02g042500 [Sorghum bicolor]
          Length = 543

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 125/430 (29%), Positives = 205/430 (47%), Gaps = 39/430 (9%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKASKVLQIMVMS 181
           ++  FC  G++ DA  L+D M R   +     C N L+   +R     +  ++L+IM  +
Sbjct: 138 VVDGFCKSGRVDDARALLDEMPRHG-VRLNALCYNSLLDCYVRRKDDARVQELLEIM-EN 195

Query: 182 GGVPDTI-TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
           GG+  T+ TY ++V  L   G I    A++DEM       DV                  
Sbjct: 196 GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDV------------------ 237

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
                          YL  YT +I   C+   + RA EV D+    G  P+  TY  L+N
Sbjct: 238 ---------------YL--YTAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLIN 280

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
             CK G+ + A +++ ++  RG+  N I +NT++     +G  D   K+   M +     
Sbjct: 281 GFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIEL 340

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V+TYN L  GLC+   +  A    + M+ K   P+ VTY T++   CKEG + EA +L 
Sbjct: 341 DVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLF 400

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             + G    P ++TYN ++DG  KKG + +A     +M + G+ PD  T+ +L+ G C  
Sbjct: 401 REMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVN 460

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +V+ A+ L +E+  RG +    AY  +I GL K  + + A Q+ + M+ +   PDD+++
Sbjct: 461 GKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLY 520

Query: 541 STIVKKVADD 550
           S +V  +  D
Sbjct: 521 SALVGSLHTD 530



 Score =  181 bits (458), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 107/390 (27%), Positives = 198/390 (50%), Gaps = 9/390 (2%)

Query: 182 GGVPDTIT---YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF---DN 235
           G  P +++    +++V G CK G++  A ALLDEM   G   + + YN++L       D+
Sbjct: 124 GSCPGSVSPLAASVVVDGFCKSGRVDDARALLDEMPRHGVRLNALCYNSLLDCYVRRKDD 183

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            + ++ +   ++    G    + TYTIL++ +     I++   V+D+M  +  + D+  Y
Sbjct: 184 ARVQELLEIMEN---GGIEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLY 240

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            +++N  C+ G    A  V +  +  G+EPN  TY  L++     G  +A + +L  M  
Sbjct: 241 TAVINAYCRAGNVRRASEVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQG 300

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                    +N +I+G C+ G+VD A+     M     + D+ TYNT+   LC+   + E
Sbjct: 301 RGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAE 360

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  LLH++      P  +TY TLI    K+G M +A  L+ +M   G  P  +T+  ++ 
Sbjct: 361 AKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMD 420

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           G+ +   + EA    KE+ K+G       Y  ++HG C + KVD+A+++ E M     +P
Sbjct: 421 GYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEP 480

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +   ++ ++  +A +G +EEA++L+  +++
Sbjct: 481 NVVAYTALISGLAKEGRSEEAFQLYDDMLK 510



 Score =  140 bits (353), Expect = 2e-30,   Method: Compositional matrix adjust.
 Identities = 86/330 (26%), Positives = 154/330 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E    T   ++ +  + G ++    ++D M  +N   D +    +I    R   + +AS
Sbjct: 198 IEATVGTYTILVDSLSTAGDISKVEAVVDEMKAKNVAGDVYLYTAVINAYCRAGNVRRAS 257

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           +V    V +G  P+  TY +++ G CK GQ+ +A  LL +M   G   + I +NT++   
Sbjct: 258 EVFDECVGNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGY 317

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
              G    A+       + G    + TY  L   +C+   +A A  +L  M  +G  P+ 
Sbjct: 318 CRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNY 377

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           VTY +L++  CK+G   +A  +   +  +G  P+ +TYN ++     +G     ++    
Sbjct: 378 VTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKE 437

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           M +    P V+TY  L++G C  G VD A+  F +M  +  +P++V Y  ++  L KEG 
Sbjct: 438 MEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGR 497

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGL 442
             EA QL   +  +  +P    Y+ L+  L
Sbjct: 498 SEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score =  117 bits (293), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 75/263 (28%), Positives = 122/263 (46%)

Query: 110 GPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIE 169
           G  +E +E+T   ++  FC  G++  A  L+  M  R    +      +I G  R   ++
Sbjct: 265 GNGIEPNERTYGVLINGFCKIGQMEAAEMLLADMQGRGVGHNQIIFNTMIDGYCRQGMVD 324

Query: 170 KASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTIL 229
            A KV   M   G   D  TYN +  GLC+  ++  A  LL  M   G  P+ +TY T++
Sbjct: 325 NALKVKAAMEKMGIELDVYTYNTLACGLCRVNRMAEAKTLLHIMIEKGVPPNYVTYTTLI 384

Query: 230 RTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCS 289
                 G   +A   +++   KG  P ++TY ++++   K+  I  A     +M  +G  
Sbjct: 385 SIHCKEGDMVEARRLFREMAGKGAMPSVVTYNVMMDGYIKKGSIREAERFRKEMEKKGLV 444

Query: 290 PDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKI 349
           PD+ TY SLV+  C  GK D A+ +   +  RG EPN + Y  L+  L   G  +   ++
Sbjct: 445 PDVYTYASLVHGHCVNGKVDVALKLFEEMKHRGTEPNVVAYTALISGLAKEGRSEEAFQL 504

Query: 350 LDIMNEASHSPTVFTYNILINGL 372
            D M +A  +P    Y+ L+  L
Sbjct: 505 YDDMLKAGLTPDDSLYSALVGSL 527



 Score =  116 bits (290), Expect = 3e-23,   Method: Compositional matrix adjust.
 Identities = 64/233 (27%), Positives = 120/233 (51%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L    G  V +++   N ++  +C +G + +A K+   M +     D +    L  GL R
Sbjct: 295 LADMQGRGVGHNQIIFNTMIDGYCRQGMVDNALKVKAAMEKMGIELDVYTYNTLACGLCR 354

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           ++R+ +A  +L IM+  G  P+ +TY  ++   CK G +  A  L  EM+  G  P V+T
Sbjct: 355 VNRMAEAKTLLHIMIEKGVPPNYVTYTTLISIHCKEGDMVEARRLFREMAGKGAMPSVVT 414

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           YN ++      G  ++A  F K+  +KG  P + TY  L+   C    +  A+++ ++M 
Sbjct: 415 YNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEMK 474

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
             G  P++V Y +L++   K+G+ ++A  + +++L  G+ P+   Y+ L+ SL
Sbjct: 475 HRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSL 527



 Score = 57.0 bits (136), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/120 (25%), Positives = 60/120 (50%), Gaps = 1/120 (0%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N ++  +  +G + +A +    M ++  +PD +   +L+ G     +++ A K+ + M
Sbjct: 414 TYNVMMDGYIKKGSIREAERFRKEMEKKGLVPDVYTYASLVHGHCVNGKVDVALKLFEEM 473

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF-DNGK 237
              G  P+ + Y  ++ GL K G+   A  L D+M  +G  PD   Y+ ++ ++  DN K
Sbjct: 474 KHRGTEPNVVAYTALISGLAKEGRSEEAFQLYDDMLKAGLTPDDSLYSALVGSLHTDNRK 533


>gi|115445449|ref|NP_001046504.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|50251963|dbj|BAD27898.1| putative pentatricopeptide (PPR) repeat-containing protein [Oryza
           sativa Japonica Group]
 gi|113536035|dbj|BAF08418.1| Os02g0266200 [Oryza sativa Japonica Group]
 gi|125581581|gb|EAZ22512.1| hypothetical protein OsJ_06176 [Oryza sativa Japonica Group]
 gi|215704610|dbj|BAG94238.1| unnamed protein product [Oryza sativa Japonica Group]
 gi|215737116|dbj|BAG96045.1| unnamed protein product [Oryza sativa Japonica Group]
          Length = 632

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 124/424 (29%), Positives = 214/424 (50%), Gaps = 3/424 (0%)

Query: 142 IMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV-PDTITYNMMVGGLCKR 200
           I AR+ Q P      ++I  LI   + EK  ++   M   G   PDT+TY+ ++   CK 
Sbjct: 185 IKARKCQ-PTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSALISAFCKL 243

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G+  SAI LL+EM  +G +P    Y  I+   F       A+  +++     C P + TY
Sbjct: 244 GRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMYCRPDVFTY 303

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
           T LI  + K   I  A     +M  E C PD V  N+++NF  K G+ DD + +   +  
Sbjct: 304 TELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKLFEEMGV 363

Query: 321 RGMEPNSITYNTLLHSL-GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVD 379
               PN +TYNT++ +L  S+     V    + M  +  SP+ FTY+ILI+G CK   ++
Sbjct: 364 SHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFCKTNRIE 423

Query: 380 RAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLI 439
           +A+    +M  K   P    Y +++ AL K    + A +L   L  +  S     Y  +I
Sbjct: 424 KAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSARVYAVMI 483

Query: 440 DGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNK 499
             L K G ++ A+ L+ +M + G +P+   +  L+ G  RA  ++EA+  ++++ + G  
Sbjct: 484 KHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKMQEHGCL 543

Query: 500 MRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKL 559
              ++Y ++++GL K+     A+++L  M +S  KPD   ++T++  ++  GM EEA +L
Sbjct: 544 PDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMFEEAAEL 603

Query: 560 WQKL 563
            +++
Sbjct: 604 MKEM 607



 Score =  181 bits (459), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 103/334 (30%), Positives = 173/334 (51%), Gaps = 1/334 (0%)

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           PD      LIRGL +  RI++A      M      PDT+  N M+  L K G++   + L
Sbjct: 298 PDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGLKL 357

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR-KGCPPYLITYTILIEQVC 268
            +EM VS C P+V+TYNTI++ +F++      +  W ++++  G  P   TY+ILI+  C
Sbjct: 358 FEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDGFC 417

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           K   I +A+ +L++M  +G  P    Y SL++   K  +YD A  +   L       ++ 
Sbjct: 418 KTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSSAR 477

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
            Y  ++  LG  G  D    + D M++   +P V+ YN L++GL +  ++D A+ +  +M
Sbjct: 478 VYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMRKM 537

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
               C PDI +YN +L  L K G  + A+++L  +  S+  P  ++YNT++  L+  G  
Sbjct: 538 QEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVLSALSHAGMF 597

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           E+A  L  +M   G   D IT+ +++    + DQ
Sbjct: 598 EEAAELMKEMNALGFEYDLITYSSILEAIGKVDQ 631



 Score =  179 bits (453), Expect = 5e-42,   Method: Compositional matrix adjust.
 Identities = 101/400 (25%), Positives = 189/400 (47%), Gaps = 1/400 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T + ++  FC  G+   A +L++ M      P       +I    ++D +  A  + 
Sbjct: 229 DTVTYSALISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLF 288

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M      PD  TY  ++ GL K G+I  A     EM    C+PD +  N ++  +   
Sbjct: 289 EEMRYMYCRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKA 348

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK-QCGIARAIEVLDDMAIEGCSPDIVT 294
           G+    +  +++     C P ++TY  +I+ + + +  ++      + M   G SP   T
Sbjct: 349 GRLDDGLKLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFT 408

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y+ L++  CK  + + A++++  +  +G  P    Y +L+ +LG    +D   ++   + 
Sbjct: 409 YSILIDGFCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELK 468

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E   S +   Y ++I  L K G +D AIN F++M    C P++  YN ++  L +  ML+
Sbjct: 469 ENCGSSSARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLD 528

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EAL  +  +    C P + +YN +++GLAK G   +AM +   M  + I PD +++ T++
Sbjct: 529 EALTTMRKMQEHGCLPDINSYNIILNGLAKTGGPHRAMEMLTNMKNSTIKPDAVSYNTVL 588

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
                A   EEA +L+KE+   G +     Y  ++  + K
Sbjct: 589 SALSHAGMFEEAAELMKEMNALGFEYDLITYSSILEAIGK 628



 Score =  148 bits (373), Expect = 8e-33,   Method: Compositional matrix adjust.
 Identities = 109/424 (25%), Positives = 192/424 (45%), Gaps = 3/424 (0%)

Query: 145 RRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG-GVPDTITYNMMVGGLCKRGQI 203
           +RN   D    + LI  L  +++  +  K++Q MV S   V   +  + ++  L     I
Sbjct: 116 KRNYQHDTSTYMALIHCLELVEQYGEMWKMIQEMVRSPICVVTPMELSQVIRMLGNAKMI 175

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG-CPPYLITYTI 262
             AI +  ++    C+P    YN+++  +   G++++    + +   +G C P  +TY+ 
Sbjct: 176 GKAITIFYQIKARKCQPTAQAYNSMIIMLIHEGQYEKVHELYNEMSNEGHCHPDTVTYSA 235

Query: 263 LIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRG 322
           LI   CK      AI +L++M   G  P    Y  +++   K      A+ +   +    
Sbjct: 236 LISAFCKLGRQDSAIRLLNEMKENGMQPTAKIYTMIISLFFKLDNVHGALSLFEEMRYMY 295

Query: 323 MEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAI 382
             P+  TY  L+  LG  G  D        M      P     N +IN L K G +D  +
Sbjct: 296 CRPDVFTYTELIRGLGKAGRIDEAYHFYHEMQREDCKPDTVVMNNMINFLGKAGRLDDGL 355

Query: 383 NSFNQMVSKNCQPDIVTYNTVLGALCK-EGMLNEALQLLHLLNGSSCSPCLITYNTLIDG 441
             F +M   +C P++VTYNT++ AL + +  ++E       + GS  SP   TY+ LIDG
Sbjct: 356 KLFEEMGVSHCIPNVVTYNTIIKALFESKSRVSEVFSWFERMKGSGISPSPFTYSILIDG 415

Query: 442 LAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMR 501
             K   +EKAM+L  +M E G  P    + +LI    +A + + A +L +E+ +      
Sbjct: 416 FCKTNRIEKAMMLLEEMDEKGFPPCPAAYCSLIDALGKAKRYDLACELFQELKENCGSSS 475

Query: 502 NSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQ 561
              Y ++I  L K+ ++D AI + + M      P+   ++ ++  +A   M +EA    +
Sbjct: 476 ARVYAVMIKHLGKAGRLDDAINLFDEMSKLGCTPNVYAYNALMSGLARACMLDEALTTMR 535

Query: 562 KLIE 565
           K+ E
Sbjct: 536 KMQE 539


>gi|357140125|ref|XP_003571621.1| PREDICTED: pentatricopeptide repeat-containing protein At4g19440,
           chloroplastic-like [Brachypodium distachyon]
          Length = 814

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 110/374 (29%), Positives = 186/374 (49%), Gaps = 1/374 (0%)

Query: 121 NKILQNFCSR-GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMV 179
           N ++     R G+L    +LI  M +R   P+        + L +  R ++A  +   M+
Sbjct: 410 NSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKML 469

Query: 180 MSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFK 239
             G   +  T N ++ GLC+   ++ A  +L  M   G E D ITYN +++    + K +
Sbjct: 470 EKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIE 529

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A+    D +RKG  P    +  +I   C    +  A+ +L  M IEG  PD+V+Y +++
Sbjct: 530 EALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTII 589

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHS 359
           +  CK      A   +N L++ G++PN++ YN L+   G  G       +LD M      
Sbjct: 590 DGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQ 649

Query: 360 PTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQL 419
           PT  TY  L++ +C  GLVD A   F Q    + +  +V Y  ++  LCK G ++EA+  
Sbjct: 650 PTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVGYTIMIQGLCKIGKMDEAMNY 709

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
              +   S  P  ITY TL+    K G  E+A  L+ +M+ +GI PD++++ TL+ GF +
Sbjct: 710 FEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMVSSGIVPDNVSYNTLVTGFSQ 769

Query: 480 ADQVEEAVDLLKEI 493
            D +++A++   EI
Sbjct: 770 VDSLDKAIEKAAEI 783



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 108/438 (24%), Positives = 223/438 (50%), Gaps = 3/438 (0%)

Query: 109 DGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLI-RGLIRIDR 167
           +G  +  +E   N+++   C +G  T+A +L D M  + ++       NLI R L +   
Sbjct: 328 EGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSK-EMKSTAVTYNLIARALCKEGE 386

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKR-GQIRSAIALLDEMSVSGCEPDVITYN 226
           +E+A ++L+ M+ +G    +  +N +V GL +R G++ S + L+ EM   G +P+     
Sbjct: 387 MERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMT 446

Query: 227 TILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIE 286
              + +    + ++A+G W   L KG    + T   LI  +C+   +  A EVL  M  +
Sbjct: 447 ACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNK 506

Query: 287 GCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAV 346
           G   D +TYN ++   CK  K ++A+ + ++++ +G +P++  +N+++H+    G  +  
Sbjct: 507 GMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEA 566

Query: 347 DKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGA 406
             +L  M      P V +Y  +I+G CK   + +A    N++++   +P+ V YN ++G 
Sbjct: 567 LHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGG 626

Query: 407 LCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPD 466
             + G ++ A+ +L  +      P  +TY +L+  +   G +++A  ++ Q  +N I   
Sbjct: 627 YGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVG 686

Query: 467 DITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLE 526
            + +  +I G C+  +++EA++  +E+  R        Y  +++  CKS   + A ++ +
Sbjct: 687 VVGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFD 746

Query: 527 LMISSRYKPDDTVFSTIV 544
            M+SS   PD+  ++T+V
Sbjct: 747 EMVSSGIVPDNVSYNTLV 764



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 118/480 (24%), Positives = 212/480 (44%), Gaps = 36/480 (7%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++   C  G++ +A +L   M      P       LI GL R DR  +   +L+ M  
Sbjct: 270 NLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEG 329

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P+ +  N ++   C++G    AI L DEM     +   +TYN I R +   G+ ++
Sbjct: 330 LGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMER 389

Query: 241 A------------------------------------IGFWKDQLRKGCPPYLITYTILI 264
           A                                    +    + +++G  P     T   
Sbjct: 390 AERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACT 449

Query: 265 EQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGME 324
           +Q+C+      A+ +   M  +G   +I T N+L++  C+      A  V+  ++++GME
Sbjct: 450 KQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGME 509

Query: 325 PNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINS 384
            ++ITYN ++         +   K+ D M      P  + +N +I+  C  G ++ A++ 
Sbjct: 510 LDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHL 569

Query: 385 FNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAK 444
             QM  +  QPD+V+Y T++   CK   + +A + L+ L      P  + YN LI G  +
Sbjct: 570 LGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGYGR 629

Query: 445 KGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSA 504
            G +  A+ +   M   GI P ++T+ +L+   C A  V+EA  + ++  K   ++    
Sbjct: 630 NGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGVVG 689

Query: 505 YRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           Y ++I GLCK  K+D A+   E M S    P+   ++T++      G  EEA KL+ +++
Sbjct: 690 YTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDEMV 749



 Score =  162 bits (411), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 116/484 (23%), Positives = 224/484 (46%), Gaps = 39/484 (8%)

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMAR-RNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           KT N +L+     G L    K+ D M   +   P+ +   ++I+ L ++ +++   K+L 
Sbjct: 194 KTCNALLEALARTGNLGATCKVFDEMRDCKTVTPNGYSYTSMIKALCKVGKVDDGFKILS 253

Query: 177 IMVMSG--GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
            ++ +G       + YN+++  LCK G++  AI L   M  S   P ++T+  ++  +  
Sbjct: 254 DLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLKGRMEESRVAPSMVTFGILINGLKR 313

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
           + +F +     ++    G  P  +    LI+  C++     AI + D+M  +      VT
Sbjct: 314 SDRFGEVGALLREMEGLGITPNEVICNELIDWHCRKGHFTEAIRLFDEMVSKEMKSTAVT 373

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR-GCWDAVDKILDIM 353
           YN +    CK+G+ + A  ++  +LS GM  +S  +N+++  L  R G  ++V +++  M
Sbjct: 374 YNLIARALCKEGEMERAERILEEMLSTGMTIHSGLFNSVVAGLLQRTGRLESVVRLISEM 433

Query: 354 NEASHSP-----------------------------------TVFTYNILINGLCKYGLV 378
            +    P                                    + T N LI+GLC+   +
Sbjct: 434 VKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKMLEKGLCINIATSNALIHGLCEGKNM 493

Query: 379 DRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTL 438
             A      MV+K  + D +TYN ++   CK+  + EAL+L   +      P    +N++
Sbjct: 494 KGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSI 553

Query: 439 IDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGN 498
           I      G ME+A+ L GQM   G+ PD +++ T+I G+C+A  +++A + L E+   G 
Sbjct: 554 IHAYCDLGKMEEALHLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGL 613

Query: 499 KMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYK 558
           K     Y  +I G  ++  +  AI VL+ M S   +P +  + +++  +   G+ +EA  
Sbjct: 614 KPNAVIYNALIGGYGRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKT 673

Query: 559 LWQK 562
           ++++
Sbjct: 674 MFEQ 677



 Score =  145 bits (366), Expect = 5e-32,   Method: Compositional matrix adjust.
 Identities = 104/404 (25%), Positives = 185/404 (45%), Gaps = 41/404 (10%)

Query: 200 RGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLR--KGCPPYL 257
           RG +R A+     +S     P V T N +L  +   G        + D++R  K   P  
Sbjct: 171 RGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVF-DEMRDCKTVTPNG 229

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGC--SPDIVTYNSLVNFSCKQGKYDDAVLVI 315
            +YT +I+ +CK   +    ++L D+   G   S   V YN L++  CK G+ D+A+ + 
Sbjct: 230 YSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIRLK 289

Query: 316 NNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKY 375
             +    + P+ +T+  L++ L     +  V  +L  M     +P     N LI+  C+ 
Sbjct: 290 GRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHCRK 349

Query: 376 GLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITY 435
           G    AI  F++MVSK  +   VTYN +  ALCKEG +  A ++L  +  +  +     +
Sbjct: 350 GHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSGLF 409

Query: 436 NTLIDGLAKK-GCMEKAMVLYGQMMENGISPDD--------------------------- 467
           N+++ GL ++ G +E  + L  +M++ G+ P+D                           
Sbjct: 410 NSVVAGLLQRTGRLESVVRLISEMVKRGMKPNDALMTACTKQLCQGRRHQEAVGIWLKML 469

Query: 468 --------ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD 519
                    T   LI G C    ++ A ++L+ +  +G ++ N  Y ++I G CK  K++
Sbjct: 470 EKGLCINIATSNALIHGLCEGKNMKGATEVLRTMVNKGMELDNITYNIMIQGCCKDSKIE 529

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
            A+++ + MI   +KPD  +F++I+    D G  EEA  L  ++
Sbjct: 530 EALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEALHLLGQM 573



 Score =  125 bits (315), Expect = 5e-26,   Method: Compositional matrix adjust.
 Identities = 79/284 (27%), Positives = 132/284 (46%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +E D  T N ++Q  C   K+ +A KL D M R+   PD +   ++I     + ++E+A 
Sbjct: 508 MELDNITYNIMIQGCCKDSKIEEALKLRDDMIRKGFKPDAYMFNSIIHAYCDLGKMEEAL 567

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L  M + G  PD ++Y  ++ G CK   I+ A   L+E+   G +P+ + YN ++   
Sbjct: 568 HLLGQMKIEGVQPDVVSYGTIIDGYCKAKDIQKANEYLNELMACGLKPNAVIYNALIGGY 627

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG    AIG        G  P  +TY  L+  +C    +  A  + +          +
Sbjct: 628 GRNGNISGAIGVLDTMESIGIQPTNVTYCSLMHWMCHAGLVDEAKTMFEQSRKNSIEVGV 687

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V Y  ++   CK GK D+A+     + SR + PN ITY TL+++    G  +   K+ D 
Sbjct: 688 VGYTIMIQGLCKIGKMDEAMNYFEEMRSRSIPPNKITYTTLMYAYCKSGNNEEASKLFDE 747

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
           M  +   P   +YN L+ G  +   +D+AI    ++ S   Q D
Sbjct: 748 MVSSGIVPDNVSYNTLVTGFSQVDSLDKAIEKAAEISSIMTQND 791



 Score =  110 bits (275), Expect = 2e-21,   Method: Compositional matrix adjust.
 Identities = 75/268 (27%), Positives = 129/268 (48%), Gaps = 4/268 (1%)

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE-ASHSP 360
           S  +G    AV   + L SR   P+  T N LL +L   G   A  K+ D M +  + +P
Sbjct: 168 SSARGSLRLAVDAFHVLSSRRASPSVKTCNALLEALARTGNLGATCKVFDEMRDCKTVTP 227

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI--VTYNTVLGALCKEGMLNEALQ 418
             ++Y  +I  LCK G VD      + ++    Q     V YN ++ ALCK G ++EA++
Sbjct: 228 NGYSYTSMIKALCKVGKVDDGFKILSDLIHAGLQQSAGAVPYNLLMDALCKSGRVDEAIR 287

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
           L   +  S  +P ++T+  LI+GL +     +   L  +M   GI+P+++    LI   C
Sbjct: 288 LKGRMEESRVAPSMVTFGILINGLKRSDRFGEVGALLREMEGLGITPNEVICNELIDWHC 347

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
           R     EA+ L  E+  +  K     Y L+   LCK  +++ A ++LE M+S+       
Sbjct: 348 RKGHFTEAIRLFDEMVSKEMKSTAVTYNLIARALCKEGEMERAERILEEMLSTGMTIHSG 407

Query: 539 VFSTIVKKVAD-DGMTEEAYKLWQKLIE 565
           +F+++V  +    G  E   +L  ++++
Sbjct: 408 LFNSVVAGLLQRTGRLESVVRLISEMVK 435


>gi|359472741|ref|XP_003631192.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g19890-like [Vitis vinifera]
          Length = 708

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 116/450 (25%), Positives = 216/450 (48%), Gaps = 5/450 (1%)

Query: 121 NKILQ----NFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           N+++Q    NF   GKL +A  ++  M  +  +P       ++   + +  +E A  +  
Sbjct: 154 NEVMQCMVMNFAENGKLKEAVNMVVEMQNQGLVPSTQTLNCVLDVAVGMGLVEIAENMFV 213

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
            M   G  PD +++ +MV   C  G++  A   L+ M   G   D  T   I+      G
Sbjct: 214 EMCQRGVSPDCVSFKLMVVACCNMGRVLEAERWLNAMVERGFIVDNATCTLIIDAFCQKG 273

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
              + +G++   +  G  P +I +T LI  +CKQ  I +A E+L++M   G  P++ T+ 
Sbjct: 274 YVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELLEEMVRRGWKPNVYTHT 333

Query: 297 SLVNFSCKQGKYDDAV-LVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           +L++  CK+G  + A  L +  + S G +PN  TY  +++        +  + +L  M E
Sbjct: 334 TLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQE 393

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
               P   TY  LI+G CK G   RA    + M  +   P+I TYN ++  LCK+G L+E
Sbjct: 394 QGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDE 453

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A +LL+ ++        +TY  L+    ++    +++V + +M++ G +PD  ++ TLI 
Sbjct: 454 AYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLIS 513

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
            FCR  Q++E+  L +E    G       Y  +I G C+     +A+++ + M +    P
Sbjct: 514 TFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAP 573

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           D   +  ++  +  +   ++A  L+  +++
Sbjct: 574 DSITYGALISGLCKESKLDDARNLYDAMMD 603



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/482 (25%), Positives = 233/482 (48%), Gaps = 22/482 (4%)

Query: 60  GLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLT--ITKKSHDPSLPSSDGPFVENDE 117
            L GN  ++R NEV Q    +     A N KL+     + +  +   +PS+         
Sbjct: 143 ALIGNKNLERANEVMQCMVMN----FAENGKLKEAVNMVVEMQNQGLVPST--------- 189

Query: 118 KTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN---LIRGLIRIDRIEKASKV 174
           +T N +L      G +  A  +   M +R   PD   C++   ++     + R+ +A + 
Sbjct: 190 QTLNCVLDVAVGMGLVEIAENMFVEMCQRGVSPD---CVSFKLMVVACCNMGRVLEAERW 246

Query: 175 LQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFD 234
           L  MV  G + D  T  +++   C++G +   +    +M   G  P+VI +  ++  +  
Sbjct: 247 LNAMVERGFIVDNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCK 306

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEV-LDDMAIEGCSPDIV 293
            G  KQA    ++ +R+G  P + T+T LI+ +CK+    +A  + L  +  +G  P++ 
Sbjct: 307 QGSIKQAFELLEEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVH 366

Query: 294 TYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIM 353
           TY +++N  CK+ K + A ++++ +  +G+ PN+ TY TL+      G +    +++D+M
Sbjct: 367 TYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLM 426

Query: 354 NEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGML 413
            +   SP ++TYN +I+GLCK G +D A    N++     Q D VTY  ++   C++   
Sbjct: 427 GKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADT 486

Query: 414 NEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTL 473
           N +L   + +     +P + +Y TLI    ++  M+++  L+ + +  G+ P   T+ ++
Sbjct: 487 NRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSM 546

Query: 474 IWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRY 533
           I G+CR      AV L + +   G    +  Y  +I GLCK  K+D A  + + M+    
Sbjct: 547 ICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGL 606

Query: 534 KP 535
            P
Sbjct: 607 SP 608



 Score =  184 bits (466), Expect = 1e-43,   Method: Compositional matrix adjust.
 Identities = 117/407 (28%), Positives = 198/407 (48%), Gaps = 4/407 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  T   I+  FC +G +         M      P+      LI GL +   I++A ++L
Sbjct: 258 DNATCTLIIDAFCQKGYVNRVVGYFWKMVEMGLAPNVINFTALINGLCKQGSIKQAFELL 317

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVS-GCEPDVITYNTILRTMFD 234
           + MV  G  P+  T+  ++ GLCK+G    A  L  ++  S G +P+V TY  ++     
Sbjct: 318 EEMVRRGWKPNVYTHTTLIDGLCKKGWTEKAFRLFLKLVRSDGYKPNVHTYTAMINGYCK 377

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
             K  +A         +G  P   TYT LI+  CK     RA E++D M  EG SP+I T
Sbjct: 378 EDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCKVGNFVRAYELMDLMGKEGFSPNIYT 437

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           YN++++  CK+G  D+A  ++N +   G++ + +TY  L+     +   +      + M 
Sbjct: 438 YNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVTYTILMSVHCRQADTNRSLVFFNKML 497

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +   +P + +Y  LI+  C+   +  +   F + VS    P   TY +++   C+ G  +
Sbjct: 498 KVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAVSLGLIPTKKTYTSMICGYCRYGNTS 557

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A++L   ++   C+P  ITY  LI GL K+  ++ A  LY  MM+ G+SP ++T  TL 
Sbjct: 558 LAVKLFQRMSNHGCAPDSITYGALISGLCKESKLDDARNLYDAMMDKGLSPCEVTRLTLA 617

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMA 521
           + +C+ D    A+++L  + KR   +R      ++  LC   K+DMA
Sbjct: 618 YEYCKKDDSSTAINVLDRLEKR-QWIR--TVNTLVRKLCSEGKLDMA 661



 Score =  129 bits (325), Expect = 4e-27,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 146/319 (45%), Gaps = 5/319 (1%)

Query: 105 LPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIR 164
           L  SDG   + +  T   ++  +C   KL  A  L+  M  +  +P+ +    LI G  +
Sbjct: 355 LVRSDG--YKPNVHTYTAMINGYCKEDKLNRAEMLLSRMQEQGLVPNTNTYTTLIDGHCK 412

Query: 165 IDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVIT 224
           +    +A +++ +M   G  P+  TYN ++ GLCK+G +  A  LL+++SV G + D +T
Sbjct: 413 VGNFVRAYELMDLMGKEGFSPNIYTYNAIIDGLCKKGSLDEAYRLLNKVSVHGLQADGVT 472

Query: 225 YNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMA 284
           Y  ++          +++ F+   L+ G  P + +YT LI   C+Q  +  +  + ++  
Sbjct: 473 YTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESERLFEEAV 532

Query: 285 IEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWD 344
             G  P   TY S++   C+ G    AV +   + + G  P+SITY  L+  L      D
Sbjct: 533 SLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGLCKESKLD 592

Query: 345 AVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVL 404
               + D M +   SP   T   L    CK      AIN  +++  +     I T NT++
Sbjct: 593 DARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---IRTVNTLV 649

Query: 405 GALCKEGMLNEALQLLHLL 423
             LC EG L+ A    H L
Sbjct: 650 RKLCSEGKLDMAALFFHKL 668



 Score = 89.7 bits (221), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 60/214 (28%), Positives = 94/214 (43%), Gaps = 5/214 (2%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           ++ D  T   ++   C +     +    + M +    PD H    LI    R  +++++ 
Sbjct: 466 LQADGVTYTILMSVHCRQADTNRSLVFFNKMLKVGFTPDIHSYTTLISTFCRQKQMKESE 525

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           ++ +  V  G +P   TY  M+ G C+ G    A+ L   MS  GC PD ITY  ++  +
Sbjct: 526 RLFEEAVSLGLIPTKKTYTSMICGYCRYGNTSLAVKLFQRMSNHGCAPDSITYGALISGL 585

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
               K   A   +   + KG  P  +T   L  + CK+   + AI VLD +        I
Sbjct: 586 CKESKLDDARNLYDAMMDKGLSPCEVTRLTLAYEYCKKDDSSTAINVLDRLEKRQW---I 642

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPN 326
            T N+LV   C +GK D A L  + LL +  EPN
Sbjct: 643 RTVNTLVRKLCSEGKLDMAALFFHKLLDK--EPN 674


>gi|356522596|ref|XP_003529932.1| PREDICTED: pentatricopeptide repeat-containing protein At3g54980,
           mitochondrial-like [Glycine max]
          Length = 827

 Score =  187 bits (475), Expect = 1e-44,   Method: Compositional matrix adjust.
 Identities = 117/453 (25%), Positives = 229/453 (50%), Gaps = 1/453 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D  + + ++Q  C    L  ASKL++       +P       +I   +R+    +A ++ 
Sbjct: 256 DAASYSIVIQAVCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLK 315

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             MV S    +      ++ G C RG + SA+ L DE+   G  P+V  ++ ++      
Sbjct: 316 DEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKI 375

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
           G  ++A   +      G  P +     L++   KQ  +  A  +LD  A+E     +VTY
Sbjct: 376 GNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDG-AVENGIASVVTY 434

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
           N ++ + C+ GK ++A  + + ++ +G+ P+ ++YN ++     +GC D   ++++ + E
Sbjct: 435 NIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIE 494

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
           +   P   TY IL+ G  K G  + A N F+QMV+    P   T+N+++  LCK G ++E
Sbjct: 495 SGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSE 554

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A   L+     S  P  +TYN +IDG  K+G ++ A  +Y +M  + ISP+ IT+ +LI 
Sbjct: 555 ARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLIN 614

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKP 535
           GFC++++++ A+ +  ++ ++G ++  + Y  +I G CK + ++ A +    ++     P
Sbjct: 615 GFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGLTP 674

Query: 536 DDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
           +  V++ ++    +    E A  L +++I  K+
Sbjct: 675 NTIVYNIMISAYRNLNNMEAALNLHKEMINNKI 707



 Score =  181 bits (459), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 124/453 (27%), Positives = 214/453 (47%), Gaps = 2/453 (0%)

Query: 123 ILQNFCSR-GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMS 181
           +L  +CS+ G +  A++L   M      P       L++G  + + +E A  +L   V  
Sbjct: 367 VLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAV-E 425

Query: 182 GGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQA 241
            G+   +TYN+++  LC+ G++  A  L D+M   G  P +++YN ++      G    A
Sbjct: 426 NGIASVVTYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDA 485

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
                  +  G  P  ITYTIL+E   K+     A  + D M   G  P   T+NS++N 
Sbjct: 486 HEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIING 545

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPT 361
            CK G+  +A   +N  + +   P S+TYN ++      G  D+ + +   M  +  SP 
Sbjct: 546 LCKVGRVSEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPN 605

Query: 362 VFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLH 421
           V TY  LING CK   +D A+   + M  K  + DI  Y T++   CK   +  A +   
Sbjct: 606 VITYTSLINGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFS 665

Query: 422 LLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRAD 481
            L     +P  I YN +I        ME A+ L+ +M+ N I  D   + +LI G  +  
Sbjct: 666 KLLEVGLTPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEG 725

Query: 482 QVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFS 541
           ++  A+DL  E+  RG       Y ++I+GLC   +++ A ++L+ M  +   P   +++
Sbjct: 726 KLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYN 785

Query: 542 TIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
           T++     +G  +EA++L  ++++  +    TT
Sbjct: 786 TLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTT 818



 Score =  160 bits (405), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/393 (26%), Positives = 187/393 (47%), Gaps = 35/393 (8%)

Query: 119 TNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           T N +L   C  GK+ +A  L D M  +   P      ++I G  +   ++ A +V+  +
Sbjct: 433 TYNIVLLWLCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGI 492

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           + SG  P+ ITY +++ G  K+G    A  + D+M  +G  P   T+N+I+  +   G+ 
Sbjct: 493 IESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRV 552

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +A       +++   P  +TY  +I+   K+  I  A  V  +M     SP+++TY SL
Sbjct: 553 SEARDKLNTFIKQSFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSL 612

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +N  CK  K D A+ + +++  +G+E +   Y TL+         +   K    + E   
Sbjct: 613 INGFCKSNKMDLALKMHDDMKRKGLELDITVYATLIAGFCKMQDMENACKFFSKLLEVGL 672

Query: 359 SPTVFTYNI-----------------------------------LINGLCKYGLVDRAIN 383
           +P    YNI                                   LI+GL K G +  A++
Sbjct: 673 TPNTIVYNIMISAYRNLNNMEAALNLHKEMINNKIPCDLKIYTSLIDGLLKEGKLSFALD 732

Query: 384 SFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLA 443
            +++M+ +   PDI  YN ++  LC  G L  A ++L  ++G++ +P ++ YNTLI G  
Sbjct: 733 LYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKILKEMDGNNITPTVLLYNTLIAGHF 792

Query: 444 KKGCMEKAMVLYGQMMENGISPDDITHRTLIWG 476
           K+G +++A  L+ +M++ G+ PDD T+  L+ G
Sbjct: 793 KEGNLQEAFRLHDEMLDKGLVPDDTTYDILVNG 825



 Score =  147 bits (372), Expect = 1e-32,   Method: Compositional matrix adjust.
 Identities = 112/483 (23%), Positives = 212/483 (43%), Gaps = 36/483 (7%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASK-------------------LIDIMARRNQIPDF 152
           F  +D +  N +L ++    K+T+A +                   L+  M RRN + D 
Sbjct: 147 FKLSDSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDA 206

Query: 153 HFCIN----------------LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGG 196
           H   +                L+R  ++  +  +A +        G   D  +Y++++  
Sbjct: 207 HRLFDEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQA 266

Query: 197 LCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPY 256
           +C+   +  A  L++     G  P   TY  ++      G F +A+    + +    P  
Sbjct: 267 VCRGSDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVN 326

Query: 257 LITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVIN 316
           +   T LI+  C +  +  A+ + D++   G +P++  ++ L+ +  K G  + A  +  
Sbjct: 327 VAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYT 386

Query: 317 NLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYG 376
            +   G++P     N LL     +   +    +LD   E   + +V TYNI++  LC+ G
Sbjct: 387 RMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDGAVENGIA-SVVTYNIVLLWLCELG 445

Query: 377 LVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYN 436
            V+ A N +++M+ K   P +V+YN ++   CK+G +++A ++++ +  S   P  ITY 
Sbjct: 446 KVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIESGLKPNAITYT 505

Query: 437 TLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
            L++G  KKG  E A  ++ QM+  GI P D T  ++I G C+  +V EA D L    K+
Sbjct: 506 ILMEGSFKKGDCEHAFNMFDQMVAAGIVPTDYTFNSIINGLCKVGRVSEARDKLNTFIKQ 565

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
                +  Y  +I G  K   +D A  V   M  S   P+   +++++         + A
Sbjct: 566 SFIPTSMTYNCIIDGYVKEGAIDSAESVYREMCRSEISPNVITYTSLINGFCKSNKMDLA 625

Query: 557 YKL 559
            K+
Sbjct: 626 LKM 628



 Score =  108 bits (270), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 87/407 (21%), Positives = 176/407 (43%), Gaps = 36/407 (8%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
           L+   +R ++I +A +  + M+  G VP     N+++  + +R  +  A  L DEM+   
Sbjct: 158 LLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLFDEMAERR 217

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
              D  T   ++R     GKF +A  ++     +G      +Y+I+I+ VC+   +  A 
Sbjct: 218 IYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRGSDLDLAS 277

Query: 278 EVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL 337
           ++++     G  P   TY +++    + G + +A+                         
Sbjct: 278 KLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEAL------------------------- 312

Query: 338 GSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDI 397
                     ++ D M ++     V     LI G C  G V+ A+  F+++V     P++
Sbjct: 313 ----------RLKDEMVDSRVPVNVAVATSLIKGYCVRGDVNSALRLFDEVVEVGVTPNV 362

Query: 398 VTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQ 457
             ++ ++    K G + +A +L   +      P +   N L+ G  K+  +E A +L   
Sbjct: 363 AIFSVLIEWCSKIGNVEKANELYTRMKCMGLQPTVFILNFLLKGFRKQNLLENAYLLLDG 422

Query: 458 MMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKK 517
            +ENGI+     +  L+W  C   +V EA +L  ++  +G      +Y  +I G CK   
Sbjct: 423 AVENGIASVVTYNIVLLW-LCELGKVNEACNLWDKMIGKGITPSLVSYNHMILGHCKKGC 481

Query: 518 VDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           +D A +V+  +I S  KP+   ++ +++     G  E A+ ++ +++
Sbjct: 482 MDDAHEVMNGIIESGLKPNAITYTILMEGSFKKGDCEHAFNMFDQMV 528



 Score = 89.7 bits (221), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 76/346 (21%), Positives = 154/346 (44%), Gaps = 3/346 (0%)

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           D   +N +L +     K  +A+  ++  L  G  P++    +L+  + ++  +  A  + 
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           D+MA      D  T   L+    K GK+ +A         RG++ ++ +Y+ ++ ++   
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTY 400
              D   K+++   E    P+  TY  +I    + G    A+   ++MV      ++   
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRVPVNVAVA 330

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
            +++   C  G +N AL+L   +     +P +  ++ LI+  +K G +EKA  LY +M  
Sbjct: 331 TSLIKGYCVRGDVNSALRLFDEVVEVGVTPNVAIFSVLIEWCSKIGNVEKANELYTRMKC 390

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRN-SAYRLVIHGLCKSKKVD 519
            G+ P       L+ GF + + +E A  LL   G   N + +   Y +V+  LC+  KV+
Sbjct: 391 MGLQPTVFILNFLLKGFRKQNLLENAYLLLD--GAVENGIASVVTYNIVLLWLCELGKVN 448

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
            A  + + MI     P    ++ ++      G  ++A+++   +IE
Sbjct: 449 EACNLWDKMIGKGITPSLVSYNHMILGHCKKGCMDDAHEVMNGIIE 494



 Score = 57.4 bits (137), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 39/123 (31%), Positives = 56/123 (45%), Gaps = 5/123 (4%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D K    ++      GKL+ A  L   M  R  +PD      LI GL    ++E A K+L
Sbjct: 710 DLKIYTSLIDGLLKEGKLSFALDLYSEMLCRGIVPDIFMYNVLINGLCNHGQLENAGKIL 769

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
           + M  +   P  + YN ++ G  K G ++ A  L DEM   G  PD  TY+ ++     N
Sbjct: 770 KEMDGNNITPTVLLYNTLIAGHFKEGNLQEAFRLHDEMLDKGLVPDDTTYDILV-----N 824

Query: 236 GKF 238
           GK 
Sbjct: 825 GKL 827



 Score = 54.7 bits (130), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 35/173 (20%), Positives = 79/173 (45%)

Query: 396 DIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLY 455
           D   +N +L +  +   + EA++    +      P +   N L+  + ++  +E A  L+
Sbjct: 151 DSRVFNYLLISYVRANKITEAVECFRAMLEDGVVPWVPFVNVLLTAMIRRNMVEDAHRLF 210

Query: 456 GQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS 515
            +M E  I  D  T + L+    +  +  EA     +   RG K+  ++Y +VI  +C+ 
Sbjct: 211 DEMAERRIYGDCYTLQVLMRACLKGGKFVEAERYFGQAAGRGLKLDAASYSIVIQAVCRG 270

Query: 516 KKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
             +D+A +++E      + P +  ++ ++      G   EA +L  ++++ +V
Sbjct: 271 SDLDLASKLVEGDEELGWVPSEGTYAAVIGACVRLGNFGEALRLKDEMVDSRV 323


>gi|357121994|ref|XP_003562701.1| PREDICTED: pentatricopeptide repeat-containing protein At1g05670,
           mitochondrial-like [Brachypodium distachyon]
          Length = 726

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 113/433 (26%), Positives = 206/433 (47%), Gaps = 2/433 (0%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCIN-LIRGLIRIDRIEKA 171
           V+ +  T    L       ++  A   + ++ +R   P   +C N +I+G  R  ++++A
Sbjct: 242 VKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGN-PCNTYCFNAVIQGFCREGQVQEA 300

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
            +V   M   G VPDT +Y+++V GLCK+G + +   LL EM+ +G  P +++Y+++L  
Sbjct: 301 IEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHG 360

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +   GK + A   ++    +G     I Y+I++   C+   I    ++ +DM      PD
Sbjct: 361 LCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPD 420

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
              Y SL+   C+     DA+ V   +L  G+ PN +T   L+   G     D     L 
Sbjct: 421 AYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLH 480

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            + +    P +  Y ++INGLCK    D     F  M+ +   PD V Y+ ++ +  K  
Sbjct: 481 KVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKAL 540

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHR 471
            L EA +L H +      P + TY +LI+GL     + + + L+  M+  G++PD I + 
Sbjct: 541 KLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYT 600

Query: 472 TLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           +LI  +C+   ++ A+++ + +GK G       Y  +I G  K   +D A  ++E M + 
Sbjct: 601 SLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNK 660

Query: 532 RYKPDDTVFSTIV 544
              P    ++ ++
Sbjct: 661 GLTPSVVTYTNLI 673



 Score =  171 bits (432), Expect = 1e-39,   Method: Compositional matrix adjust.
 Identities = 103/419 (24%), Positives = 201/419 (47%), Gaps = 3/419 (0%)

Query: 151 DFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCK--RGQIRSAIA 208
           +   C  L++ L+  ++I  A  +   M  SG  P+  +Y++++       R  +  A  
Sbjct: 173 ELQLCNFLLKCLVERNQIIYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFE 232

Query: 209 LLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVC 268
           LL EM + G +P+  TY T L  +    +   A  F +   ++G P     +  +I+  C
Sbjct: 233 LLSEMEMKGVKPNAATYGTYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFC 292

Query: 269 KQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSI 328
           ++  +  AIEV D M   G  PD  +Y+ LV+  CKQG       ++  +   G+ P  +
Sbjct: 293 REGQVQEAIEVFDAMKKGGLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLV 352

Query: 329 TYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQM 388
           +Y++LLH L   G  +   ++   + E         Y+I++NG C++  ++   + +N M
Sbjct: 353 SYSSLLHGLCRAGKVELAFELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDM 412

Query: 389 VSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCM 448
           V  N  PD   Y +++ A C+   L +AL +  L+  S  SP ++T   L+DG  K+  +
Sbjct: 413 VHHNFVPDAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMI 472

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           ++A +   ++ + GI P+   +R +I G C+ ++ +    +  ++ KRG       Y ++
Sbjct: 473 DEAFLFLHKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSII 532

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           I    K+ K+  A ++   M+    KP+   +++++  +  D    E   L++ +I W+
Sbjct: 533 IDSFVKALKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMI-WE 590



 Score =  128 bits (322), Expect = 7e-27,   Method: Compositional matrix adjust.
 Identities = 84/357 (23%), Positives = 170/357 (47%), Gaps = 4/357 (1%)

Query: 214 SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGI 273
           S+ G    +  Y TI+R   +   F+ A+  + +  + G    L  +  L++ + ++  I
Sbjct: 133 SLGGSMTLLQVYATIIRIFVELSMFEDALLTYTEAKKVGVELQLCNF--LLKCLVERNQI 190

Query: 274 ARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY--DDAVLVINNLLSRGMEPNSITYN 331
             A  + DDM   G SP++ +Y+ L++      +    +A  +++ +  +G++PN+ TY 
Sbjct: 191 IYARSLFDDMKSSGPSPNVYSYSVLMSAYTHGDRLYLAEAFELLSEMEMKGVKPNAATYG 250

Query: 332 TLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSK 391
           T L+ L       +    L ++ +  +    + +N +I G C+ G V  AI  F+ M   
Sbjct: 251 TYLYGLSRTRQVASAWNFLQMLCQRGNPCNTYCFNAVIQGFCREGQVQEAIEVFDAMKKG 310

Query: 392 NCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKA 451
              PD  +Y+ ++  LCK+G +     LL  +  +  +P L++Y++L+ GL + G +E A
Sbjct: 311 GLVPDTHSYSILVDGLCKQGDVLTGYDLLVEMARNGIAPTLVSYSSLLHGLCRAGKVELA 370

Query: 452 MVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHG 511
             L+ ++ E G   D I +  ++ G C+   +E   DL  ++           Y  +I+ 
Sbjct: 371 FELFRRLEEQGFKHDHIVYSIILNGCCQHLNIEVVCDLWNDMVHHNFVPDAYNYTSLIYA 430

Query: 512 LCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            C+ + +  A+ V ELM+ S   P+    + +V     + M +EA+    K+ ++ +
Sbjct: 431 FCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFLHKVRQFGI 487



 Score =  111 bits (277), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/281 (24%), Positives = 120/281 (42%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           D      ++  FC    LTDA  + ++M      P+   C  L+ G  +   I++A   L
Sbjct: 420 DAYNYTSLIYAFCRHRNLTDALGVFELMLDSGVSPNVVTCTILVDGFGKERMIDEAFLFL 479

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDN 235
             +   G VP+   Y +++ GLCK  +      +  +M   G  PD + Y+ I+ +    
Sbjct: 480 HKVRQFGIVPNLCMYRVIINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKA 539

Query: 236 GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTY 295
            K  +A   +   L +G  P + TYT LI  +C    +   + +   M  EG +PD + Y
Sbjct: 540 LKLPEAFRLFHKMLDEGTKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILY 599

Query: 296 NSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
            SL+   CK+     A+ +   +   G+  ++  Y  L+         D    +++ M  
Sbjct: 600 TSLIVCYCKRSNMKAALEIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTN 659

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
              +P+V TY  LI G  K G   +A  ++N M+     PD
Sbjct: 660 KGLTPSVVTYTNLIIGYFKIGDERKANMTYNSMLQAGITPD 700



 Score = 74.3 bits (181), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 47/205 (22%), Positives = 89/205 (43%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           I+   C   K      +   M +R  +PD      +I   ++  ++ +A ++   M+  G
Sbjct: 497 IINGLCKVNKSDHVWGIFADMIKRGYVPDTVVYSIIIDSFVKALKLPEAFRLFHKMLDEG 556

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  TY  ++ GLC   ++   + L   M   G  PD I Y +++         K A+
Sbjct: 557 TKPNVFTYTSLINGLCHDDRLPEVVTLFKHMIWEGLTPDRILYTSLIVCYCKRSNMKAAL 616

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             ++   + G       YT LI    K   +  A  ++++M  +G +P +VTY +L+   
Sbjct: 617 EIFRGMGKLGLSADAFLYTCLIGGFSKVLAMDGAQCLMEEMTNKGLTPSVVTYTNLIIGY 676

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNS 327
            K G    A +  N++L  G+ P++
Sbjct: 677 FKIGDERKANMTYNSMLQAGITPDA 701


>gi|125548275|gb|EAY94097.1| hypothetical protein OsI_15870 [Oryza sativa Indica Group]
          Length = 554

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 120/414 (28%), Positives = 199/414 (48%), Gaps = 9/414 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRID----RIEKASKVLQIM 178
           ++  F   G+L +A+ ++  M R + +P    C+     ++R+         A KV   M
Sbjct: 109 MVAAFGEAGRLPEAADMVLEM-RSHGLP---LCVETANWVLRVGLETGSFVYARKVFDGM 164

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
             +G  PD  ++  +V   C+ G++    ALL  M   G   D  T   ++R++ + G+F
Sbjct: 165 TRAGVCPDERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRF 224

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K    F++  L  G PP ++ YT  I+ +CK+  + +A  VL++M   G  P++ T+ +L
Sbjct: 225 KDVSEFFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTL 284

Query: 299 VNFSCKQGKYDDAVLVINNLL-SRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEAS 357
           ++  CK G  + A  +   L+ S   +PN  TY  ++      G     + +L  M E  
Sbjct: 285 IDGLCKIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQG 344

Query: 358 HSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEAL 417
             P   TY  LI G CK G  DRA    N+M  +   P+I TYN V+   CK+G + EA 
Sbjct: 345 LKPNTNTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAY 404

Query: 418 QLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGF 477
           ++L +          ITY  LI    K+G +  A+ L+ +M+ENG  PD   + +LI  +
Sbjct: 405 KVLRMATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTY 464

Query: 478 CRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISS 531
           C+  Q+EE+     +    G       Y  +I G CK  +  MA++V E M+ +
Sbjct: 465 CQQRQMEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQN 518



 Score =  163 bits (413), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 109/416 (26%), Positives = 190/416 (45%), Gaps = 18/416 (4%)

Query: 54  VSLKCRGLPGNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTITKKSHDPSLPSSDGPFV 113
           + ++  GLP  +C++  N      W     VL V  +       +K  D    +   P  
Sbjct: 127 LEMRSHGLP--LCVETAN------W-----VLRVGLETGSFVYARKVFDGMTRAGVCP-- 171

Query: 114 ENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASK 173
             DE++   ++   C  GK+ +   L+  M R     D   C  ++R L    R +  S+
Sbjct: 172 --DERSFRALVVVCCREGKVEEVDALLAAMWRYGFSLDNATCTVVVRSLCEKGRFKDVSE 229

Query: 174 VLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMF 233
             + M+  G  P+ + Y   + GLCKR  ++ A  +L+EM   G +P+V T+ T++  + 
Sbjct: 230 FFRRMLEMGTPPNVVNYTAWIDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLC 289

Query: 234 DNGKFKQAIGFWKDQLRKGC-PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             G  ++A   +   ++     P + TYT++I   C++  +ARA  +L  M  +G  P+ 
Sbjct: 290 KIGWTERAFRLFLKLIKSSSYKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNT 349

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
            TY +L+   CK G +D A  ++N +   G  PN  TYN ++     +G      K+L +
Sbjct: 350 NTYTTLIGGHCKGGSFDRAFELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRM 409

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
                      TY ILI   CK G +  A++ F++MV   C PDI  Y +++   C++  
Sbjct: 410 ATSQGLKFDKITYTILITEHCKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQ 469

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDI 468
           + E+ +           P   TY ++I G  K G    A+ ++ +M++NG   D I
Sbjct: 470 MEESQKFFDKCLMIGLLPTKQTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSI 525



 Score =  119 bits (297), Expect = 6e-24,   Method: Compositional matrix adjust.
 Identities = 83/296 (28%), Positives = 137/296 (46%), Gaps = 4/296 (1%)

Query: 124 LQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKV-LQIMVMSG 182
           +   C R  +  A  +++ M  R   P+ +    LI GL +I   E+A ++ L+++  S 
Sbjct: 250 IDGLCKRRYVKQAFHVLEEMVGRGLKPNVYTHTTLIDGLCKIGWTERAFRLFLKLIKSSS 309

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
             P+  TY +M+GG C+ G++  A  LL  M   G +P+  TY T++      G F +A 
Sbjct: 310 YKPNVHTYTVMIGGYCREGKLARAEMLLVRMVEQGLKPNTNTYTTLIGGHCKGGSFDRAF 369

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
                  ++G  P + TY  +I+  CK+  I  A +VL     +G   D +TY  L+   
Sbjct: 370 ELMNKMKQEGFLPNIYTYNAVIDGFCKKGKIQEAYKVLRMATSQGLKFDKITYTILITEH 429

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CKQG    A+ + + ++  G  P+   Y +L+ +   +   +   K  D        PT 
Sbjct: 430 CKQGHITYALDLFDRMVENGCCPDIEAYTSLISTYCQQRQMEESQKFFDKCLMIGLLPTK 489

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD--IVTYNTVLGALCKEGMLNEA 416
            TY  +I G CK G    A+  F +MV   C  D  ++  N V+ A  +   L+EA
Sbjct: 490 QTYTSMIAGYCKVGRSTMALRVFERMVQNGCFADSILMCSNNVVSAT-RHSPLHEA 544


>gi|50582688|gb|AAT78758.1| putative pentatricopeptide repeat-containing protein [Oryza sativa
           Japonica Group]
 gi|108709716|gb|ABF97511.1| pentatricopeptide, putative, expressed [Oryza sativa Japonica
           Group]
          Length = 1025

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/449 (26%), Positives = 217/449 (48%), Gaps = 1/449 (0%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVL 175
           DEKT N +L   C  G L +A  L + M  RN +PD +    L+ G  +  ++  A  +L
Sbjct: 524 DEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVPALILL 583

Query: 176 QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV-SGCEPDVITYNTILRTMFD 234
           Q+M+  G VPDTI Y  ++ GL   GQ+++A  +  E+    G   D I YN+++     
Sbjct: 584 QMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYADCIAYNSMMNGYLK 643

Query: 235 NGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVT 294
            G+  +     ++       P   +Y IL+    K+  ++R + +  DM  EG  PD VT
Sbjct: 644 GGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVKEGIKPDNVT 703

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y  L+   C+ G  + AV  +  ++  G+ P+++ ++ L+ +   +       ++   M 
Sbjct: 704 YRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSNALQLFSYMK 763

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
               SP+  TY  ++NGL +   + ++    + MV    QP    Y  ++ A C+ G ++
Sbjct: 764 WLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALINAKCRVGDID 823

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
            A +L   +      P  +  ++++ GL K G +E+A++++  +M  G+ P   T  TL+
Sbjct: 824 GAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLM 883

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+  ++++A  L + +   G K+    Y ++I GLC  K +  A+ + E M S    
Sbjct: 884 HGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLL 943

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKL 563
           P+ T + T+   +   G  ++  KL + +
Sbjct: 944 PNITTYITLTGAMYATGTMQDGEKLLKDI 972



 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 142/570 (24%), Positives = 249/570 (43%), Gaps = 97/570 (17%)

Query: 84  VLAVNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIM 143
           ++ +NK        K+S D   P         D  T N +L + C++GKL+ A  ++  M
Sbjct: 205 LVGINKSEYVWLFLKESLDRKFPL--------DVTTCNIVLNSLCTQGKLSKAESMLQKM 256

Query: 144 ARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQI 203
            +  ++P+      ++   ++  R + A ++L  M  +G   D  TYN+M+  LCK  + 
Sbjct: 257 -KNCRLPNAVTYNTILNWYVKKGRCKSALRILDDMEKNGIEADLYTYNIMIDKLCKLKRS 315

Query: 204 RSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTIL 263
             A  LL  M      PD  +YNT++   F  GK   AI  +   LR+   P + TYT L
Sbjct: 316 ARAYLLLKRMREVNLTPDECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTAL 375

Query: 264 IEQVCKQC--------------------GIARAIEVLDDMAIEGCSPDIVTYNSLVN--- 300
           I+  C+                       +++A ++L  M  +G  PD++TY++L+N   
Sbjct: 376 IDGYCRNGRTDEARRVLYEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALINEGM 435

Query: 301 ----------------------FS------CKQGKYDDAVLVINNLLSRGMEPNSITYNT 332
                                 F+      C++G   +A  V +N++  G  P+  TY +
Sbjct: 436 IAEAEQFKQYMSRMKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGS 495

Query: 333 LLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN 392
           LL  L   G      + +  + E + +    T N L+ G+CK+G +D A++   +MV++N
Sbjct: 496 LLRGLCQGGHLVQAKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRN 555

Query: 393 CQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAM 452
             PD  TY  +L   CK G +  AL LL ++      P  I Y  L++GL  +G ++ A 
Sbjct: 556 ILPDTYTYTILLDGFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAAS 615

Query: 453 VLY--------------------------GQ----------MMENGISPDDITHRTLIWG 476
            ++                          GQ          M EN + P   ++  L+ G
Sbjct: 616 YMFQEIICKEGLYADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHG 675

Query: 477 FCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPD 536
           + +  Q+   + L +++ K G K  N  YRL+I GLC+   +++A++ LE M+     PD
Sbjct: 676 YIKKGQLSRTLYLYRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPD 735

Query: 537 DTVFSTIVKKVADDGMTEEAYKLWQKLIEW 566
           +  F  ++K  ++      A +L+  + +W
Sbjct: 736 NLAFDILIKAFSEKSKMSNALQLFSYM-KW 764



 Score =  185 bits (470), Expect = 5e-44,   Method: Compositional matrix adjust.
 Identities = 126/483 (26%), Positives = 221/483 (45%), Gaps = 25/483 (5%)

Query: 116 DEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDR-------- 167
           DE + N ++  F   GK+  A  + + M R++  P       LI G  R  R        
Sbjct: 333 DECSYNTLIHGFFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVL 392

Query: 168 ------------IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSV 215
                       + KA ++L+ M+  G  PD ITY+ ++      G I  A      MS 
Sbjct: 393 YEMQITGVRPREVSKAKQILKCMLADGIDPDVITYSALIN----EGMIAEAEQFKQYMSR 448

Query: 216 SGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIAR 275
                DV ++N I+ +    G   +A   + + +R G PP + TY  L+  +C+   + +
Sbjct: 449 MKISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQ 508

Query: 276 AIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLH 335
           A E +  +  + C+ D  T N+L+   CK G  D+A+ +   +++R + P++ TY  LL 
Sbjct: 509 AKEFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLD 568

Query: 336 SLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKN-CQ 394
               RG       +L +M E    P    Y  L+NGL   G V  A   F +++ K    
Sbjct: 569 GFCKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLY 628

Query: 395 PDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVL 454
            D + YN+++    K G +NE  +L+  ++ +   P   +YN L+ G  KKG + + + L
Sbjct: 629 ADCIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYL 688

Query: 455 YGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCK 514
           Y  M++ GI PD++T+R LI+G C    +E AV  L+++   G    N A+ ++I    +
Sbjct: 689 YRDMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSE 748

Query: 515 SKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTT 574
             K+  A+Q+   M      P    +  +V  +      +++Y++   ++E  +  K T 
Sbjct: 749 KSKMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTH 808

Query: 575 LLA 577
            +A
Sbjct: 809 YIA 811



 Score =  177 bits (448), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 117/487 (24%), Positives = 224/487 (45%), Gaps = 36/487 (7%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           +  D  + N I+ ++C RG + +A  + D M R    PD     +L+RGL +   + +A 
Sbjct: 451 ISFDVASFNCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAK 510

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
           + +  ++      D  T N ++ G+CK G +  A+ L ++M      PD  TY  +L   
Sbjct: 511 EFMVYLLEKACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGF 570

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI-EGCSPD 291
              GK   A+   +  L KG  P  I YT L+  +  +  +  A  +  ++   EG   D
Sbjct: 571 CKRGKVVPALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEIICKEGLYAD 630

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
            + YNS++N   K G+ ++   ++ N+    + P+S +YN L+H    +G       +  
Sbjct: 631 CIAYNSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYR 690

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
            M +    P   TY +LI GLC+YGL++ A+    +MV +   PD + ++ ++ A  ++ 
Sbjct: 691 DMVKEGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKS 750

Query: 412 MLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP------ 465
            ++ ALQL   +     SP   TY  +++GL +K  ++++  +   M+E+G+ P      
Sbjct: 751 KMSNALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYI 810

Query: 466 -----------------------------DDITHRTLIWGFCRADQVEEAVDLLKEIGKR 496
                                         ++   +++ G C+  +VEEA+ +   I + 
Sbjct: 811 ALINAKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRA 870

Query: 497 GNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEA 556
           G     + +  ++HGLCK  K+D A  + +LM S   K D   ++ ++  + +     +A
Sbjct: 871 GMVPTIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDA 930

Query: 557 YKLWQKL 563
             L++++
Sbjct: 931 LDLYEEM 937



 Score =  163 bits (412), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 119/464 (25%), Positives = 221/464 (47%), Gaps = 29/464 (6%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
           ++  +   GK+ DA+  I  M           C N++  L+ I++ E     L+  +   
Sbjct: 166 LVNAYVKEGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLDRK 225

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCE-PDVITYNTILRTMFDNGKFKQA 241
              D  T N+++  LC +G++  A ++L +M    C  P+ +TYNTIL      G+ K A
Sbjct: 226 FPLDVTTCNIVLNSLCTQGKLSKAESMLQKMK--NCRLPNAVTYNTILNWYVKKGRCKSA 283

Query: 242 IGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNF 301
           +    D  + G    L TY I+I+++CK    ARA  +L  M     +PD  +YN+L++ 
Sbjct: 284 LRILDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHG 343

Query: 302 SCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN------- 354
              +GK + A+ + N +L + ++P+  TY  L+      G  D   ++L  M        
Sbjct: 344 FFGEGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPR 403

Query: 355 EASHS-------------PTVFTYNILINGLCKYGLVDRAINSFNQMVSK-NCQPDIVTY 400
           E S +             P V TY+ LIN     G++  A   F Q +S+     D+ ++
Sbjct: 404 EVSKAKQILKCMLADGIDPDVITYSALINE----GMIAEA-EQFKQYMSRMKISFDVASF 458

Query: 401 NTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMME 460
           N ++ + C+ G + EA  +   +      P + TY +L+ GL + G + +A      ++E
Sbjct: 459 NCIIDSYCQRGNVLEAFSVYDNMVRHGWPPDICTYGSLLRGLCQGGHLVQAKEFMVYLLE 518

Query: 461 NGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDM 520
              + D+ T  TL+ G C+   ++EA+DL +++  R        Y +++ G CK  KV  
Sbjct: 519 KACAIDEKTLNTLLVGICKHGTLDEALDLCEKMVTRNILPDTYTYTILLDGFCKRGKVVP 578

Query: 521 AIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLI 564
           A+ +L++M+     PD   ++ ++  + ++G  + A  ++Q++I
Sbjct: 579 ALILLQMMLEKGLVPDTIAYTCLLNGLVNEGQVKAASYMFQEII 622



 Score =  136 bits (343), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 91/382 (23%), Positives = 174/382 (45%), Gaps = 13/382 (3%)

Query: 121  NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
            N ++  +   G++ +  +L+  M      P       L+ G I+  ++ +   + + MV 
Sbjct: 635  NSMMNGYLKGGQINEIERLMRNMHENEVYPSSASYNILMHGYIKKGQLSRTLYLYRDMVK 694

Query: 181  SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
             G  PD +TY +++ GLC+ G I  A+  L++M + G  PD + ++ +++   +  K   
Sbjct: 695  EGIKPDNVTYRLLIFGLCEYGLIEIAVKFLEKMVLEGVFPDNLAFDILIKAFSEKSKMSN 754

Query: 241  AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
            A+  +         P   TY  ++  + ++  + ++ E+L DM   G  P    Y +L+N
Sbjct: 755  ALQLFSYMKWLHMSPSSKTYVAMVNGLIRKNWLQQSYEILHDMVESGLQPKHTHYIALIN 814

Query: 301  FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              C+ G  D A  +  ++ + G+ P+ +  ++++  L   G  +    +   +  A   P
Sbjct: 815  AKCRVGDIDGAFELKEDMKALGVVPSEVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVP 874

Query: 361  TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            T+ T+  L++GLCK   +D A +    M S   + D+VTYN ++  LC +  + +AL L 
Sbjct: 875  TIATFTTLMHGLCKEFKIDDAFHLKQLMESCGLKVDVVTYNVLITGLCNKKCICDALDLY 934

Query: 421  HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
              +      P + TY TL   +   G M+    L   + + GI P      +L W     
Sbjct: 935  EEMKSKGLLPNITTYITLTGAMYATGTMQDGEKLLKDIEDRGIVPSYKHPESLEW----- 989

Query: 481  DQVEEAVDLLKEIGKRGNKMRN 502
             ++E A+       KR N +RN
Sbjct: 990  -RMENAI-------KRLNTIRN 1003



 Score =  103 bits (257), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 101/409 (24%), Positives = 183/409 (44%), Gaps = 64/409 (15%)

Query: 214 SVSGCEPDVIT------YNTILRTMFDNGKFKQAIGFWKDQL------RKGCPPYLITYT 261
           SV G E  +IT      + T+ +  + +GK  +A G    ++      + G       Y 
Sbjct: 53  SVHGVESSIITVLAMQRWETLSQMAYKSGKLDKAHGKLALRMLDSIVQQSGLDRITHIYC 112

Query: 262 ILIEQVCKQCGIARAIEVLDDMAIEG----------------CSP-DIVTYNSLVNFSCK 304
           + +  + +    ++A+ VL  +A+ G                C P ++ + + LVN   K
Sbjct: 113 MAVHILVQAQMPSQAMSVLRHLALTGFSCSAIFSSLLRTISRCDPTNLFSVDLLVNAYVK 172

Query: 305 QGKYDDAVLVINNLLSRGMEPNSITYNTLLHSL----GSRGCWDAVDKILDIMNEASHSP 360
           +GK  DA   I  +   G + +  + N +L++L     S   W  + + LD         
Sbjct: 173 EGKVLDAAAAIFFMDECGFKASLFSCNNILNALVGINKSEYVWLFLKESLD----RKFPL 228

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQ-PDIVTYNTVLGALCKEGMLNEALQL 419
            V T NI++N LC  G + +A +   +M  KNC+ P+ VTYNT+L    K+G    AL++
Sbjct: 229 DVTTCNIVLNSLCTQGKLSKAESMLQKM--KNCRLPNAVTYNTILNWYVKKGRCKSALRI 286

Query: 420 LHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCR 479
           L  +  +     L TYN +ID L K     +A +L  +M E  ++PD+ ++ TLI GF  
Sbjct: 287 LDDMEKNGIEADLYTYNIMIDKLCKLKRSARAYLLLKRMREVNLTPDECSYNTLIHGFFG 346

Query: 480 ADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKS--------------------KKVD 519
             ++  A+ +  ++ ++  K   + Y  +I G C++                    ++V 
Sbjct: 347 EGKINLAIYIFNQMLRQSLKPSVATYTALIDGYCRNGRTDEARRVLYEMQITGVRPREVS 406

Query: 520 MAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
            A Q+L+ M++    PD   +S ++    ++GM  EA +  Q +   K+
Sbjct: 407 KAKQILKCMLADGIDPDVITYSALI----NEGMIAEAEQFKQYMSRMKI 451



 Score = 67.0 bits (162), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 39/139 (28%), Positives = 66/139 (47%)

Query: 117 EKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQ 176
           E   + I++  C  GK+ +A  +   + R   +P       L+ GL +  +I+ A  + Q
Sbjct: 841 EVAESSIVRGLCKCGKVEEAIIVFSSIMRAGMVPTIATFTTLMHGLCKEFKIDDAFHLKQ 900

Query: 177 IMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
           +M   G   D +TYN+++ GLC +  I  A+ L +EM   G  P++ TY T+   M+  G
Sbjct: 901 LMESCGLKVDVVTYNVLITGLCNKKCICDALDLYEEMKSKGLLPNITTYITLTGAMYATG 960

Query: 237 KFKQAIGFWKDQLRKGCPP 255
             +      KD   +G  P
Sbjct: 961 TMQDGEKLLKDIEDRGIVP 979


>gi|297844198|ref|XP_002889980.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
 gi|297335822|gb|EFH66239.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata]
          Length = 517

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 108/350 (30%), Positives = 179/350 (51%), Gaps = 3/350 (0%)

Query: 131 GKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTIT- 189
           GK+TDA ++ + M R    PD   C  L+ GL    +++ A +++   + S  V  +I  
Sbjct: 163 GKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVV 222

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           YN ++ G CK G+I  A AL   MS  GCEPD++TYN +L   +DN   K+A G   + +
Sbjct: 223 YNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMV 282

Query: 250 RKGCPPYLITYTILIEQVCKQCGIARAIE-VLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
           R G      +Y  L+++ C+     R    +L +M   G   D+V+Y++L+   C+    
Sbjct: 283 RSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFC-DVVSYSTLIETFCRASNT 341

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
             A  +   +  +G+  N +T+ +L+ +    G      K+LD M E   SP    Y  +
Sbjct: 342 KKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTI 401

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           ++ LCK G VD+A   FN M+     PD ++YN+++  LC+ G + EA++L   + G  C
Sbjct: 402 LDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKEC 461

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
            P  +T+  +I GL ++  +  A  ++ QMM+ G + D     TLI   C
Sbjct: 462 CPDELTFKFIIGGLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511



 Score =  160 bits (404), Expect = 2e-36,   Method: Compositional matrix adjust.
 Identities = 105/419 (25%), Positives = 195/419 (46%), Gaps = 6/419 (1%)

Query: 158 LIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSG 217
            I GL ++ + E    +L+ M   G +PD   +N+ +  LC+  ++  A+     M   G
Sbjct: 85  FISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENKVGFAVQTFFCMVQRG 144

Query: 218 CEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAI 277
            EPDV++Y  ++  +F  GK   A+  W   +R G  P       L+  +C    +  A 
Sbjct: 145 REPDVVSYTILINGLFRAGKVTDAVEIWNAMIRSGVSPDNKACAALVVGLCHARKVDLAY 204

Query: 278 E-VLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHS 336
           E V +++        IV YN+L++  CK G+ + A  + + +   G EP+ +TYN LL+ 
Sbjct: 205 EMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSKIGCEPDLVTYNVLLNY 264

Query: 337 LGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPD 396
                     + ++  M  +      ++YN L+   C+    DR  +   + +      D
Sbjct: 265 YYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDRCYSFMLKEMEPRGFCD 324

Query: 397 IVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYG 456
           +V+Y+T++   C+     +A +L   +        ++T+ +LI    ++G    A  L  
Sbjct: 325 VVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIKAFLREGNSSVAKKLLD 384

Query: 457 QMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSK 516
           QM E G+SPD I + T++   C++  V++A  +  ++ +        +Y  +I GLC+S 
Sbjct: 385 QMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEITPDAISYNSLISGLCRSG 444

Query: 517 KVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKVFEKGTTL 575
           +V  AI++ E M      PD+  F  I+  +  +     AYK+W +++     +KG TL
Sbjct: 445 RVTEAIKLFEDMKGKECCPDELTFKFIIGGLIREKKLSAAYKVWDQMM-----DKGFTL 498



 Score =  134 bits (337), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 101/418 (24%), Positives = 178/418 (42%), Gaps = 38/418 (9%)

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
           + Y   +  L K G I +A+ + DEM  S        YN  +  +    +F+ A   ++D
Sbjct: 10  LAYRSRIANLVKSGMIDNAVQVFDEMRHSSYRVFSSDYNRFIGVLVKESRFELAEAIYRD 69

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
            +  G      TY+  I  +CK         +L DM   G  PDI  +N  ++  C++ K
Sbjct: 70  MMPMGFSLIPFTYSRFISGLCKVKKFELIDALLRDMETLGFIPDIWAFNIYLDLLCRENK 129

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRG-CWDAVDKILDIMNEASHSPTVFTYN 366
              AV     ++ RG EP+ ++Y  L++ L   G   DAV+ I + M  +  SP      
Sbjct: 130 VGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVE-IWNAMIRSGVSPDNKACA 188

Query: 367 ILINGLCKYGLVDRAINSFNQMV-SKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
            L+ GLC    VD A     + + S   +  IV YN ++   CK G + +A  L   ++ 
Sbjct: 189 ALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIEKAEALKSFMSK 248

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD------------------ 467
             C P L+TYN L++       +++A  +  +M+ +GI  D                   
Sbjct: 249 IGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLLKRHCRVSHPDR 308

Query: 468 -----------------ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIH 510
                            +++ TLI  FCRA   ++A  L +E+ ++G       +  +I 
Sbjct: 309 CYSFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQKGIVTNVVTFTSLIK 368

Query: 511 GLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWKV 568
              +     +A ++L+ M      PD   ++TI+  +   G  ++AY ++  +IE ++
Sbjct: 369 AFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDKAYGIFNDMIEHEI 426



 Score =  133 bits (334), Expect = 3e-28,   Method: Compositional matrix adjust.
 Identities = 96/398 (24%), Positives = 174/398 (43%), Gaps = 9/398 (2%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  L   C   K+  A +    M +R + PD      LI GL R  ++  A ++   M+ 
Sbjct: 118 NIYLDLLCRENKVGFAVQTFFCMVQRGREPDVVSYTILINGLFRAGKVTDAVEIWNAMIR 177

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALL-DEMSVSGCEPDVITYNTILRTMFDNGKFK 239
           SG  PD      +V GLC   ++  A  ++ +E+  +  +  ++ YN ++      G+ +
Sbjct: 178 SGVSPDNKACAALVVGLCHARKVDLAYEMVAEEIKSARVKLSIVVYNALISGFCKAGRIE 237

Query: 240 QAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLV 299
           +A        + GC P L+TY +L+        + RA  V+ +M   G   D  +YN L+
Sbjct: 238 KAEALKSFMSKIGCEPDLVTYNVLLNYYYDNNMLKRAEGVMTEMVRSGIQLDAYSYNQLL 297

Query: 300 NFSCKQGKYDDAVLVINNLLSRGMEP----NSITYNTLLHSLGSRGCWDAVDKILDIMNE 355
              C+    D       + + + MEP    + ++Y+TL+ +           K+ + M +
Sbjct: 298 KRHCRVSHPDRCY----SFMLKEMEPRGFCDVVSYSTLIETFCRASNTKKAYKLFEEMRQ 353

Query: 356 ASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNE 415
                 V T+  LI    + G    A    +QM      PD + Y T+L  LCK G +++
Sbjct: 354 KGIVTNVVTFTSLIKAFLREGNSSVAKKLLDQMTELGLSPDRIFYTTILDHLCKSGNVDK 413

Query: 416 ALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIW 475
           A  + + +     +P  I+YN+LI GL + G + +A+ L+  M      PD++T + +I 
Sbjct: 414 AYGIFNDMIEHEITPDAISYNSLISGLCRSGRVTEAIKLFEDMKGKECCPDELTFKFIIG 473

Query: 476 GFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLC 513
           G  R  ++  A  +  ++  +G  +       +I   C
Sbjct: 474 GLIREKKLSAAYKVWDQMMDKGFTLDRDVSDTLIKASC 511


>gi|356499433|ref|XP_003518545.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g06920-like [Glycine max]
          Length = 905

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/439 (26%), Positives = 214/439 (48%), Gaps = 1/439 (0%)

Query: 127 FCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPD 186
           F   GK+  A K    +  +  +PD     ++I  L + +R+++A ++ + +  +  VP 
Sbjct: 282 FGKVGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPC 341

Query: 187 TITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWK 246
              YN M+ G    G+   A +LL+     GC P VI YN IL  +   GK ++A+    
Sbjct: 342 VYAYNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRIL- 400

Query: 247 DQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQG 306
           + ++    P L +Y ILI+ +CK   +  A++V D M   G  P+I+T N +++  CK  
Sbjct: 401 EAMKMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQ 460

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
           + D+A  +   L  +   P+S+T+ +L+  LG  G  +    + + M ++  +P    Y 
Sbjct: 461 RLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYT 520

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            LI    K G  +     + +M+ + C PD++  N  +  + K G + +   L   +   
Sbjct: 521 SLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQ 580

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
             +P + +Y+ LI GL K G  +    L+ +M E G+  D   +  +I GFC++ +V +A
Sbjct: 581 GLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKA 640

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
             LL+E+  +G +     Y  VI GL K  ++D A  + E   S     +  V+S+++  
Sbjct: 641 YQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDG 700

Query: 547 VADDGMTEEAYKLWQKLIE 565
               G  +EAY + ++L++
Sbjct: 701 FGKVGRIDEAYLILEELMQ 719



 Score =  182 bits (463), Expect = 3e-43,   Method: Compositional matrix adjust.
 Identities = 109/443 (24%), Positives = 221/443 (49%), Gaps = 1/443 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++  + S GK  +A  L++   R+  IP       ++  L R  ++E+A ++L+ M M
Sbjct: 346 NTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAMKM 405

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               P+  +YN+++  LCK G++ +A+ + D M  +G  P++IT N ++  +    +  +
Sbjct: 406 DAA-PNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLDE 464

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A   +     K C P  +T+  LI+ + +   +  A  + + M   G +P+ V Y SL+ 
Sbjct: 465 ACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIR 524

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
              K G+ +D   +   ++ RG  P+ +  N  +  +   G  +    + + +     +P
Sbjct: 525 NFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTP 584

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLL 420
            V +Y+ILI+GL K G        F +M  +    D   YN V+   CK G +N+A QLL
Sbjct: 585 DVRSYSILIHGLVKGGFSKDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLL 644

Query: 421 HLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRA 480
             +      P ++TY ++IDGLAK   +++A +L+ +     +  + + + +LI GF + 
Sbjct: 645 EEMKTKGLQPTVVTYGSVIDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKV 704

Query: 481 DQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVF 540
            +++EA  +L+E+ ++G       +  ++  L K++++D A+   + M + +  P++  +
Sbjct: 705 GRIDEAYLILEELMQKGLTPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTY 764

Query: 541 STIVKKVADDGMTEEAYKLWQKL 563
           S +V  +       +A+  WQ++
Sbjct: 765 SIMVNGLCKVRKFNKAFVFWQEM 787



 Score =  173 bits (439), Expect = 2e-40,   Method: Compositional matrix adjust.
 Identities = 119/482 (24%), Positives = 228/482 (47%), Gaps = 24/482 (4%)

Query: 87  VNKKLRGLTITKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARR 146
           V + LR L   K    P+L S             N ++   C  G+L  A K+ D M   
Sbjct: 393 VEEALRILEAMKMDAAPNLTSY------------NILIDMLCKAGELEAALKVQDSMKEA 440

Query: 147 NQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGV------PDTITYNMMVGGLCKR 200
              P      N+I   I IDR+ KA ++ +   +  G+      PD++T+  ++ GL + 
Sbjct: 441 GLFP------NIITVNIMIDRLCKAQRLDEACSIFLGLDHKVCTPDSVTFCSLIDGLGRH 494

Query: 201 GQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITY 260
           G++  A  L ++M  SG  P+ + Y +++R  F  G+ +     +K+ + +GC P L+  
Sbjct: 495 GKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEMMHRGCSPDLMLL 554

Query: 261 TILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS 320
              ++ V K   I +   + +++  +G +PD+ +Y+ L++   K G   D   +   +  
Sbjct: 555 NNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFSKDTYKLFYEMKE 614

Query: 321 RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDR 380
           +G+  ++  YN ++      G  +   ++L+ M      PTV TY  +I+GL K   +D 
Sbjct: 615 QGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSVIDGLAKIDRLDE 674

Query: 381 AINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLID 440
           A   F +  SK    ++V Y++++    K G ++EA  +L  L     +P   T+N L+D
Sbjct: 675 AYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGLTPNTYTWNCLLD 734

Query: 441 GLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKM 500
            L K   +++A+V +  M      P+++T+  ++ G C+  +  +A    +E+ K+G K 
Sbjct: 735 ALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFVFWQEMQKQGLKP 794

Query: 501 RNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLW 560
               Y  +I GL +   V  A  + E   SS   PD   ++ +++ +++     +AY L+
Sbjct: 795 NTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLSNANKAMDAYILF 854

Query: 561 QK 562
           ++
Sbjct: 855 EE 856



 Score =  172 bits (437), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 111/418 (26%), Positives = 199/418 (47%), Gaps = 10/418 (2%)

Query: 126 NFCS-------RGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
            FCS        GK+ DA  L + M    Q P+     +LIR   +  R E   K+ + M
Sbjct: 483 TFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLIRNFFKCGRKEDGHKIYKEM 542

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G  PD +  N  +  + K G+I    AL +E+   G  PDV +Y+ ++  +   G  
Sbjct: 543 MHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLTPDVRSYSILIHGLVKGGFS 602

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K     + +   +G       Y I+I+  CK   + +A ++L++M  +G  P +VTY S+
Sbjct: 603 KDTYKLFYEMKEQGLHLDTRAYNIVIDGFCKSGKVNKAYQLLEEMKTKGLQPTVVTYGSV 662

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++   K  + D+A ++     S+ ++ N + Y++L+   G  G  D    IL+ + +   
Sbjct: 663 IDGLAKIDRLDEAYMLFEEAKSKAVDLNVVVYSSLIDGFGKVGRIDEAYLILEELMQKGL 722

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +P  +T+N L++ L K   +D A+  F  M +  C P+ VTY+ ++  LCK    N+A  
Sbjct: 723 TPNTYTWNCLLDALVKAEEIDEALVCFQNMKNLKCPPNEVTYSIMVNGLCKVRKFNKAFV 782

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               +      P  ITY T+I GLA+ G + +A  L+ +   +G  PD   +  +I G  
Sbjct: 783 FWQEMQKQGLKPNTITYTTMISGLARVGNVLEAKDLFERFKSSGGIPDSACYNAMIEGLS 842

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAI---QVLELMISSRY 533
            A++  +A  L +E   +G ++ +    +++  L K+  ++ A     VL  M  S++
Sbjct: 843 NANKAMDAYILFEETRLKGCRIYSKTCVVLLDALHKADCLEQAAIVGAVLREMAKSQH 900



 Score =  149 bits (375), Expect = 6e-33,   Method: Compositional matrix adjust.
 Identities = 127/571 (22%), Positives = 242/571 (42%), Gaps = 67/571 (11%)

Query: 45  LRDLGAGRNVSLKCRGLP----GNVCIDRVNEVDQDEWSSESHVLAVNKKLRGLTI---- 96
           L+  G  + V   CR L     G    D +N  D  E      V+ V ++L+ + +    
Sbjct: 61  LKSEGMRKTVHDVCRVLDTYPWGAALEDALNTFD--EMPQPELVVGVIRRLKDVRVALHY 118

Query: 97  -------TKKSHDPSLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQI 149
                  TK+ H P              +  N +L        L    ++++ M+     
Sbjct: 119 FRWVERKTKQLHSP--------------EAYNALLMLMARTRNLEYLEQILEEMSMAGFG 164

Query: 150 PDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIAL 209
           P  + CI ++   ++  ++ +A  V++ M      P    Y  ++G L    +    + L
Sbjct: 165 PSNNTCIEMVASFVKSRKLREAFGVIETMRKFKFRPAYSAYTTLIGALSAAHEADPMLTL 224

Query: 210 LDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCK 269
           L +M   G E  V  + T++      G+   A+    +         L+ Y + I+   K
Sbjct: 225 LRQMQEIGYEVTVHLFTTLICVFAREGRVDAALSLLDEMKSNSFNADLVLYNVCIDCFGK 284

Query: 270 QCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLS--------- 320
              +  A +   ++  +G  PD VT+ S++   CK  + D+AV +   L S         
Sbjct: 285 VGKVDMAWKFFHELKSQGLVPDDVTFTSMIGVLCKAERVDEAVELFEELDSNKSVPCVYA 344

Query: 321 --------------------------RGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
                                     +G  P+ I YN +L  LG +G  +   +IL+ M 
Sbjct: 345 YNTMIMGYGSVGKFNEAYSLLERQKRKGCIPSVIAYNCILTCLGRKGKVEEALRILEAM- 403

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           +   +P + +YNILI+ LCK G ++ A+   + M      P+I+T N ++  LCK   L+
Sbjct: 404 KMDAAPNLTSYNILIDMLCKAGELEAALKVQDSMKEAGLFPNIITVNIMIDRLCKAQRLD 463

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           EA  +   L+   C+P  +T+ +LIDGL + G +  A +LY +M+++G +P+ + + +LI
Sbjct: 464 EACSIFLGLDHKVCTPDSVTFCSLIDGLGRHGKVNDAYMLYEKMLDSGQTPNAVVYTSLI 523

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
             F +  + E+   + KE+  RG           +  + K+ +++    + E + +    
Sbjct: 524 RNFFKCGRKEDGHKIYKEMMHRGCSPDLMLLNNYMDCVFKAGEIEKGRALFEEIKAQGLT 583

Query: 535 PDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           PD   +S ++  +   G +++ YKL+ ++ E
Sbjct: 584 PDVRSYSILIHGLVKGGFSKDTYKLFYEMKE 614


>gi|225450007|ref|XP_002272339.1| PREDICTED: pentatricopeptide repeat-containing protein At2g19280
           [Vitis vinifera]
          Length = 644

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 112/419 (26%), Positives = 214/419 (51%), Gaps = 7/419 (1%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSG 182
            +  +CS+G +    KL+  M      PD      +I  L ++  +++A+ +L  M   G
Sbjct: 227 FISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMG 286

Query: 183 GVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAI 242
              D+++ + +V G CK G+   A+ +L+  ++S   P++  +N+ +  +  +G   +A 
Sbjct: 287 VFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNLS---PNIFVFNSFISKLCTDGNMLKAA 343

Query: 243 GFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFS 302
             ++D    G  P   +YT ++   CK   I+ A++ L  M   G  P + TY  L++  
Sbjct: 344 KVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSC 403

Query: 303 CKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTV 362
           CK G  + A  +   +++ G+ P+ ++YNTL++  G +G      ++L +M  A  SP +
Sbjct: 404 CKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDL 463

Query: 363 FTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHL 422
            TYNILI+GL K GLV+ A +  +++  +   PD+VT+  ++G    +G   EA  L   
Sbjct: 464 VTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFY 523

Query: 423 LNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQ 482
           ++     P ++T + L++G  +  CM +A VL+ +M++ G+  D I + +LI GFC    
Sbjct: 524 MSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGN 583

Query: 483 VEEA---VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVD-MAIQVLELMISSRYKPDD 537
           +++A   V ++ E G   N + + A  L     C    V+  A ++ +L++    + +D
Sbjct: 584 IDDACHLVSMMIEHGIMPNNITHHALVLGYEKKCVENPVERAAFKLQQLLLKYGIQAED 642



 Score =  180 bits (457), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 122/469 (26%), Positives = 208/469 (44%), Gaps = 36/469 (7%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVG 195
           A KLI  M   N  P    C +L++ L+  +++  A   L+ M   G   +    ++ + 
Sbjct: 170 ALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLGLNASIISLFIS 229

Query: 196 GLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC-- 253
           G C +G I +   LL EM   G +PDV+ Y  ++ ++      K+A        + G   
Sbjct: 230 GYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSILFKMTQMGVFL 289

Query: 254 ------------------------------PPYLITYTILIEQVCKQCGIARAIEVLDDM 283
                                          P +  +   I ++C    + +A +V  DM
Sbjct: 290 DSVSVSSVVDGYCKVGKSEEAMDVLEVFNLSPNIFVFNSFISKLCTDGNMLKAAKVFQDM 349

Query: 284 AIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCW 343
              G  PD  +Y +++   CK     +A+  +  +L RG+ P+  TY  L+ S    G  
Sbjct: 350 CEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGIRPSVATYTLLIDSCCKPGNM 409

Query: 344 DAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTV 403
           +  + +   M      P V +YN L+NG  K G + +A    + M S    PD+VTYN +
Sbjct: 410 EMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFELLSMMRSAGVSPDLVTYNIL 469

Query: 404 LGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGI 463
           +  L K G++NEA  +L  L     SP ++T+  +I G + KG  E+A +L+  M E+ +
Sbjct: 470 IHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAFLLFFYMSEHHL 529

Query: 464 SPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQ 523
            PD +T   L+ G+CR   + EA  L  ++   G K     Y  +IHG C    +D A  
Sbjct: 530 EPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGFCSLGNIDDACH 589

Query: 524 VLELMISSRYKPDDTVFSTIV----KKVADDGMTEEAYKLWQKLIEWKV 568
           ++ +MI     P++     +V    KK  ++ +   A+KL Q L+++ +
Sbjct: 590 LVSMMIEHGIMPNNITHHALVLGYEKKCVENPVERAAFKLQQLLLKYGI 638



 Score =  138 bits (347), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 95/377 (25%), Positives = 177/377 (46%), Gaps = 3/377 (0%)

Query: 189 TYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQ 248
            Y M+V    K    + A+ L+ +M      P +   N++L+ + ++ +   A  F K+ 
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 249 LRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKY 308
             +G        ++ I   C Q  I    ++L +M   G  PD+V Y  +++  CK    
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNIL 368
            +A  ++  +   G+  +S++ ++++      G  +    +L++ N    SP +F +N  
Sbjct: 273 KEATSILFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVFNL---SPNIFVFNSF 329

Query: 369 INGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSC 428
           I+ LC  G + +A   F  M      PD  +Y T++   CK   ++ AL+ L  +     
Sbjct: 330 ISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLKRGI 389

Query: 429 SPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVD 488
            P + TY  LID   K G ME A  L+ +M+  G+ PD +++ TL+ G+ +   +++A +
Sbjct: 390 RPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQKAFE 449

Query: 489 LLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVA 548
           LL  +   G       Y ++IHGL K   V+ A  +L+ +    + PD   F+ I+   +
Sbjct: 450 LLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFS 509

Query: 549 DDGMTEEAYKLWQKLIE 565
           + G  EEA+ L+  + E
Sbjct: 510 NKGNFEEAFLLFFYMSE 526



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 79/286 (27%), Positives = 135/286 (47%), Gaps = 1/286 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N  +   C+ G +  A+K+   M     IPD      ++ G  ++  I  A K L  M+ 
Sbjct: 327 NSFISKLCTDGNMLKAAKVFQDMCEMGLIPDCFSYTTMMAGYCKVKDISNALKYLGKMLK 386

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P   TY +++   CK G +  A  L   M   G  PDV++YNT++      G  ++
Sbjct: 387 RGIRPSVATYTLLIDSCCKPGNMEMAEYLFQRMITEGLVPDVVSYNTLMNGYGKKGHLQK 446

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A          G  P L+TY ILI  + K+  +  A ++LD++   G SPD+VT+ +++ 
Sbjct: 447 AFELLSMMRSAGVSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIG 506

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSP 360
               +G +++A L+   +    +EP+ +T + LL+      C    + +   M +A    
Sbjct: 507 GFSNKGNFEEAFLLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKA 566

Query: 361 TVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNT-VLG 405
            V  YN LI+G C  G +D A +  + M+     P+ +T++  VLG
Sbjct: 567 DVILYNSLIHGFCSLGNIDDACHLVSMMIEHGIMPNNITHHALVLG 612



 Score = 64.3 bits (155), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 64/256 (25%), Positives = 114/256 (44%), Gaps = 12/256 (4%)

Query: 312 VLVINNLLSRGMEP--NSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILI 369
           +LV  N+  + M+   + I+YN+     G  G  +   KI +   +     TV  Y +L+
Sbjct: 106 ILVSGNMNHKAMDLLLHLISYNS-----GEEGWHNIFLKIHETHTKRRVLETV--YGMLV 158

Query: 370 NGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCS 429
           N   K  +   A+    +M   N  P I   N++L AL +   LN A   L  +      
Sbjct: 159 NCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEMKSQGLG 218

Query: 430 PCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDL 489
                 +  I G   +G ++    L  +M   GI PD + +  +I   C+   ++EA  +
Sbjct: 219 LNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLLKEATSI 278

Query: 490 LKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVAD 549
           L ++ + G  + + +   V+ G CK  K + A+ VLE+       P+  VF++ + K+  
Sbjct: 279 LFKMTQMGVFLDSVSVSSVVDGYCKVGKSEEAMDVLEVF---NLSPNIFVFNSFISKLCT 335

Query: 550 DGMTEEAYKLWQKLIE 565
           DG   +A K++Q + E
Sbjct: 336 DGNMLKAAKVFQDMCE 351



 Score = 58.2 bits (139), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/167 (25%), Positives = 71/167 (42%), Gaps = 3/167 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T N ++     RG + +A  ++D + RR   PD     N+I G       E+A 
Sbjct: 459 VSPDLVTYNILIHGLIKRGLVNEAKDILDELTRRGFSPDVVTFTNIIGGFSNKGNFEEAF 518

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +   M      PD +T + ++ G C+   +  A  L  +M  +G + DVI YN+++   
Sbjct: 519 LLFFYMSEHHLEPDVVTCSALLNGYCRTRCMAEANVLFHKMLDAGLKADVILYNSLIHGF 578

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILI---EQVCKQCGIARA 276
              G    A       +  G  P  IT+  L+   E+ C +  + RA
Sbjct: 579 CSLGNIDDACHLVSMMIEHGIMPNNITHHALVLGYEKKCVENPVERA 625



 Score = 45.4 bits (106), Expect = 0.074,   Method: Compositional matrix adjust.
 Identities = 32/136 (23%), Positives = 59/136 (43%)

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
            Y  L++   K+   + A+ L  +M    I P      +L+     ++Q+  A D LKE+
Sbjct: 153 VYGMLVNCYVKENMTQVALKLICKMRHLNIFPLIGVCNSLLKALLESEQLNLAWDFLKEM 212

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMT 553
             +G  +  S   L I G C    +D   ++L  M     KPD   ++ ++  +    + 
Sbjct: 213 KSQGLGLNASIISLFISGYCSQGNIDTGWKLLMEMKYLGIKPDVVAYTIVIDSLCKMSLL 272

Query: 554 EEAYKLWQKLIEWKVF 569
           +EA  +  K+ +  VF
Sbjct: 273 KEATSILFKMTQMGVF 288


>gi|242090439|ref|XP_002441052.1| hypothetical protein SORBIDRAFT_09g019485 [Sorghum bicolor]
 gi|241946337|gb|EES19482.1| hypothetical protein SORBIDRAFT_09g019485 [Sorghum bicolor]
          Length = 548

 Score =  187 bits (474), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/385 (30%), Positives = 197/385 (51%), Gaps = 8/385 (2%)

Query: 136 ASKLIDIMARRNQIPDFHFCINLIRGLI--RIDRIEKASKVLQIMVMSGGVPDTITYNMM 193
           A  +++ MA    +PD   C  L+ G+   R+   + A +V++ M  +G  PD +TY+ +
Sbjct: 116 ALAVLNAMAADGVVPDTAACTVLV-GVYACRLHWFDAAYEVVRWMAANGVAPDVVTYSTL 174

Query: 194 VGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGC 253
           + GLC  G++  A+ +LD M   GC+P+  TY  IL     +G   +A    +  +  G 
Sbjct: 175 ISGLCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAYCTSGMIHEAKDLLETMVAAGF 234

Query: 254 PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVL 313
            P   TY +L+E +CK C      ++L++ + +G +PD +TY++ ++  CK G+ D ++ 
Sbjct: 235 APSTATYNVLVEALCKACAFEEVDKLLEESSAKGWTPDTITYSTYMDGLCKNGRVDKSLA 294

Query: 314 VINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLC 373
           +++ +LS G+ PN IT N LL  +  R    A   +L+   E      V  YN ++  LC
Sbjct: 295 LVDKMLSVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLC 354

Query: 374 KYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLI 433
                   +  F  MV K   P+  T++ V+ +LCK G L+EAL    LL        ++
Sbjct: 355 DERRWLAVVKLFVDMVKKGIAPNSWTFSIVIHSLCKLGKLHEALC---LLGSEEFVANVV 411

Query: 434 TYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEI 493
           TYNTLI  L   G   +A +L  +M+E GI+P+DIT+  LI   C+  +   A+  L + 
Sbjct: 412 TYNTLIRHLNFLGKSCEAYLLLHEMIEKGIAPNDITYSLLIDCLCKEGKFLVALSCLNQC 471

Query: 494 GKRGNKMRNSAYRLVIHGLCKSKKV 518
            + G  +  +A   ++ GL    K+
Sbjct: 472 IEGG--LSKAAVSSILRGLIAGGKL 494



 Score =  152 bits (383), Expect = 5e-34,   Method: Compositional matrix adjust.
 Identities = 101/367 (27%), Positives = 176/367 (47%), Gaps = 5/367 (1%)

Query: 113 VENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKAS 172
           V  D  T + ++   CS G++ +A  ++D+M      P+ H    ++        I +A 
Sbjct: 164 VAPDVVTYSTLISGLCSAGRVAEALGVLDLMLEEGCQPNAHTYTPILHAYCTSGMIHEAK 223

Query: 173 KVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTM 232
            +L+ MV +G  P T TYN++V  LCK         LL+E S  G  PD ITY+T +  +
Sbjct: 224 DLLETMVAAGFAPSTATYNVLVEALCKACAFEEVDKLLEESSAKGWTPDTITYSTYMDGL 283

Query: 233 FDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDI 292
             NG+  +++      L  G  P  IT  IL++ VC++     A  +L+  A  G   ++
Sbjct: 284 CKNGRVDKSLALVDKMLSVGLRPNEITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNV 343

Query: 293 VTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDI 352
           V YN+++   C + ++   V +  +++ +G+ PNS T++ ++HSL   G    + + L +
Sbjct: 344 VNYNTVMRRLCDERRWLAVVKLFVDMVKKGIAPNSWTFSIVIHSLCKLG---KLHEALCL 400

Query: 353 MNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGM 412
           +        V TYN LI  L   G    A    ++M+ K   P+ +TY+ ++  LCKEG 
Sbjct: 401 LGSEEFVANVVTYNTLIRHLNFLGKSCEAYLLLHEMIEKGIAPNDITYSLLIDCLCKEGK 460

Query: 413 LNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRT 472
              AL  L+       S   ++  +++ GL   G + +   L G ++  G   D   ++ 
Sbjct: 461 FLVALSCLNQCIEGGLSKAAVS--SILRGLIAGGKLRELQALIGWILGQGFIIDVYMYQE 518

Query: 473 LIWGFCR 479
           LI  FC+
Sbjct: 519 LIISFCK 525



 Score =  146 bits (369), Expect = 3e-32,   Method: Compositional matrix adjust.
 Identities = 103/374 (27%), Positives = 177/374 (47%), Gaps = 5/374 (1%)

Query: 194 VGGLCKRGQIRSAIALLDEM-SVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKG 252
           VGG         A+ LLDEM S+ G  PD   + T         +   A+         G
Sbjct: 68  VGGDHPSAGAERALHLLDEMRSLMGRRPDAACFTTAAAAFSSASQPGAALAVLNAMAADG 127

Query: 253 CPPYLITYTILIE-QVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDA 311
             P     T+L+    C+      A EV+  MA  G +PD+VTY++L++  C  G+  +A
Sbjct: 128 VVPDTAACTVLVGVYACRLHWFDAAYEVVRWMAANGVAPDVVTYSTLISGLCSAGRVAEA 187

Query: 312 VLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILING 371
           + V++ +L  G +PN+ TY  +LH+  + G       +L+ M  A  +P+  TYN+L+  
Sbjct: 188 LGVLDLMLEEGCQPNAHTYTPILHAYCTSGMIHEAKDLLETMVAAGFAPSTATYNVLVEA 247

Query: 372 LCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPC 431
           LCK    +       +  +K   PD +TY+T +  LCK G ++++L L+  +      P 
Sbjct: 248 LCKACAFEEVDKLLEESSAKGWTPDTITYSTYMDGLCKNGRVDKSLALVDKMLSVGLRPN 307

Query: 432 LITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLK 491
            IT N L+DG+ ++     A  L     E G   + + + T++   C   +    V L  
Sbjct: 308 EITLNILLDGVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLCDERRWLAVVKLFV 367

Query: 492 EIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDG 551
           ++ K+G    +  + +VIH LCK  K+    + L L+ S  +  +   ++T+++ +   G
Sbjct: 368 DMVKKGIAPNSWTFSIVIHSLCKLGKLH---EALCLLGSEEFVANVVTYNTLIRHLNFLG 424

Query: 552 MTEEAYKLWQKLIE 565
            + EAY L  ++IE
Sbjct: 425 KSCEAYLLLHEMIE 438



 Score =  132 bits (332), Expect = 5e-28,   Method: Compositional matrix adjust.
 Identities = 100/386 (25%), Positives = 180/386 (46%), Gaps = 7/386 (1%)

Query: 169 EKASKVL-QIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           E+A  +L ++  + G  PD   +           Q  +A+A+L+ M+  G  PD     T
Sbjct: 78  ERALHLLDEMRSLMGRRPDAACFTTAAAAFSSASQPGAALAVLNAMAADGVVPDTAA-CT 136

Query: 228 ILRTMFDN--GKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAI 285
           +L  ++      F  A    +     G  P ++TY+ LI  +C    +A A+ VLD M  
Sbjct: 137 VLVGVYACRLHWFDAAYEVVRWMAANGVAPDVVTYSTLISGLCSAGRVAEALGVLDLMLE 196

Query: 286 EGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDA 345
           EGC P+  TY  +++  C  G   +A  ++  +++ G  P++ TYN L+ +L     ++ 
Sbjct: 197 EGCQPNAHTYTPILHAYCTSGMIHEAKDLLETMVAAGFAPSTATYNVLVEALCKACAFEE 256

Query: 346 VDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLG 405
           VDK+L+  +    +P   TY+  ++GLCK G VD+++   ++M+S   +P+ +T N +L 
Sbjct: 257 VDKLLEESSAKGWTPDTITYSTYMDGLCKNGRVDKSLALVDKMLSVGLRPNEITLNILLD 316

Query: 406 ALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISP 465
            +C+      A  LL           ++ YNT++  L  +      + L+  M++ GI+P
Sbjct: 317 GVCRRSTAWAAKCLLECSAEIGWHVNVVNYNTVMRRLCDERRWLAVVKLFVDMVKKGIAP 376

Query: 466 DDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVL 525
           +  T   +I   C+  ++ EA+ LL   G          Y  +I  L    K   A  +L
Sbjct: 377 NSWTFSIVIHSLCKLGKLHEALCLL---GSEEFVANVVTYNTLIRHLNFLGKSCEAYLLL 433

Query: 526 ELMISSRYKPDDTVFSTIVKKVADDG 551
             MI     P+D  +S ++  +  +G
Sbjct: 434 HEMIEKGIAPNDITYSLLIDCLCKEG 459


>gi|224127136|ref|XP_002329409.1| predicted protein [Populus trichocarpa]
 gi|222870459|gb|EEF07590.1| predicted protein [Populus trichocarpa]
          Length = 599

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 117/446 (26%), Positives = 212/446 (47%), Gaps = 5/446 (1%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++++F S G + +   +   M      P       L+ GL+    IE A +VL++M  
Sbjct: 136 NSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMEN 195

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
               PD +TYN M+ G C+ G+ + A     +M +    PD ITY T+++  +  G F  
Sbjct: 196 GKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDL 255

Query: 241 AIGFWKDQLRKGC--PPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
            +  + +    G   PP+   Y+++I  +CK+        V + M  +GC  ++  Y +L
Sbjct: 256 CLSLYHEMDENGLEIPPH--AYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTAL 313

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           ++ + K G   +A+L+   +   G+EP+ +TY  +++ +   G  D   + L+       
Sbjct: 314 IDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRVNGV 373

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQ 418
           +     Y+ LI+GL K G V  A   F +MV K C PD   YN ++ AL K G  +EAL 
Sbjct: 374 AVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDEALA 433

Query: 419 LLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFC 478
               +    C   + TY  +I+GL ++   E+A+ ++  M++ GI+P     R L  G C
Sbjct: 434 FFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSIGLC 493

Query: 479 RADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDT 538
            + +V  A  LL E+   G  +  +A+  +++ LCK+ ++  A ++ +  +    +    
Sbjct: 494 LSGKVARACKLLDELAPMG-VIPETAFEDMLNVLCKAGRIKEACKLADGFVDRGREIPGR 552

Query: 539 VFSTIVKKVADDGMTEEAYKLWQKLI 564
           V + ++  +   G  + A KL    I
Sbjct: 553 VRTVLINALRKAGNADLALKLMHSKI 578



 Score =  147 bits (370), Expect = 2e-32,   Method: Compositional matrix adjust.
 Identities = 95/378 (25%), Positives = 165/378 (43%), Gaps = 35/378 (9%)

Query: 221 DVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVL 280
           +V   N+++++    G  ++ +  W+     G  P L TY  L+  +     I  A  VL
Sbjct: 131 NVSAANSLIKSFGSLGMVEELLWVWRGMKENGVEPSLFTYNFLLNGLVNSVFIESAERVL 190

Query: 281 DDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSR 340
           + M      PD+VTYN+++   C+ GK   A     ++  R + P+ ITY TL+ +  + 
Sbjct: 191 EVMENGKIGPDVVTYNTMIKGYCQVGKTQKAFEKFRDMELRNVAPDKITYMTLIQACYAE 250

Query: 341 GCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNC------- 393
           G +D    +   M+E         Y+++I GLCK G        F +M+ K C       
Sbjct: 251 GDFDLCLSLYHEMDENGLEIPPHAYSLVIGGLCKEGKCVEGYAVFEKMIQKGCKVNVAIY 310

Query: 394 ----------------------------QPDIVTYNTVLGALCKEGMLNEALQLLHLLNG 425
                                       +PD+VTY  V+  +CK G L+EA++ L     
Sbjct: 311 TALIDSNAKCGNMGEAMLLFERMKKEGLEPDVVTYGVVVNCMCKSGRLDEAMEYLEFCRV 370

Query: 426 SSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEE 485
           +  +   + Y++LIDGL K G + +A  L+ +M++ G  PD   +  LI    +  + +E
Sbjct: 371 NGVAVNAMLYSSLIDGLGKAGRVHEAEKLFEEMVKKGCPPDSYCYNALIDALAKCGKTDE 430

Query: 486 AVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVK 545
           A+   K +   G       Y ++I+GL +  K + A+++ ++MI     P    F  +  
Sbjct: 431 ALAFFKRMEDEGCDQTVYTYTIMINGLFREHKNEEALKMWDMMIDKGITPTAAAFRALSI 490

Query: 546 KVADDGMTEEAYKLWQKL 563
            +   G    A KL  +L
Sbjct: 491 GLCLSGKVARACKLLDEL 508



 Score =  101 bits (251), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 68/262 (25%), Positives = 117/262 (44%)

Query: 295 YNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMN 354
           Y S ++     G  D+   V       G   N    N+L+ S GS G  + +  +   M 
Sbjct: 100 YVSSIDVLAINGDLDNVKSVFCKFRGMGFLMNVSAANSLIKSFGSLGMVEELLWVWRGMK 159

Query: 355 EASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLN 414
           E    P++FTYN L+NGL     ++ A      M +    PD+VTYNT++   C+ G   
Sbjct: 160 ENGVEPSLFTYNFLLNGLVNSVFIESAERVLEVMENGKIGPDVVTYNTMIKGYCQVGKTQ 219

Query: 415 EALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLI 474
           +A +    +   + +P  ITY TLI     +G  +  + LY +M ENG+      +  +I
Sbjct: 220 KAFEKFRDMELRNVAPDKITYMTLIQACYAEGDFDLCLSLYHEMDENGLEIPPHAYSLVI 279

Query: 475 WGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYK 534
            G C+  +  E   + +++ ++G K+  + Y  +I    K   +  A+ + E M     +
Sbjct: 280 GGLCKEGKCVEGYAVFEKMIQKGCKVNVAIYTALIDSNAKCGNMGEAMLLFERMKKEGLE 339

Query: 535 PDDTVFSTIVKKVADDGMTEEA 556
           PD   +  +V  +   G  +EA
Sbjct: 340 PDVVTYGVVVNCMCKSGRLDEA 361


>gi|255660992|gb|ACU25665.1| pentatricopeptide repeat-containing protein [Junellia spathulata]
          Length = 376

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 109/365 (29%), Positives = 185/365 (50%), Gaps = 1/365 (0%)

Query: 168 IEKASKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNT 227
           I+ A +V + +V S   PD + YN M+ G  +  +I+    L + M   G    V ++N 
Sbjct: 6   IDSAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSKG-NRSVSSFNI 64

Query: 228 ILRTMFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG 287
           ++R +FDNGK  + I  W+   + G     ITY IL+   CK   I +++ VL+    +G
Sbjct: 65  MMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLEMAEQKG 124

Query: 288 CSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVD 347
              D   Y++++N  CK+   D AV V+N ++  G +PN+  YNTL++ L     ++   
Sbjct: 125 GVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVSKFEDAI 184

Query: 348 KILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGAL 407
           ++   M     SPT+ TYN LINGLCK  +   A N   +++ K   P ++TY+ ++  L
Sbjct: 185 RVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGL 244

Query: 408 CKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDD 467
           C +  +  ALQL + +      P +   N LI GL   G M+ A+ LY  M     +P+ 
Sbjct: 245 CLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQLALSLYFDMNRWKCAPNL 304

Query: 468 ITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLEL 527
           ++H TL+ GF +   +  A+ +   I + G +    +Y + + GLC   ++  AI  L  
Sbjct: 305 VSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAILFLHD 364

Query: 528 MISSR 532
            ++ +
Sbjct: 365 AVTKK 369



 Score =  179 bits (453), Expect = 4e-42,   Method: Compositional matrix adjust.
 Identities = 101/365 (27%), Positives = 189/365 (51%), Gaps = 1/365 (0%)

Query: 128 CSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDT 187
           C  G +  A ++   +      PD      ++ G  R+ +I+   ++ ++M  S G    
Sbjct: 1   CESGDIDSAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMM-GSKGNRSV 59

Query: 188 ITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKD 247
            ++N+M+ GL   G++   I++ + M  SG   D ITY  ++     NG   +++   + 
Sbjct: 60  SSFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLEM 119

Query: 248 QLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGK 307
             +KG       Y+ +I  +CK+  + +A+ VL+ M   GC P+   YN+LVN      K
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVSK 179

Query: 308 YDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNI 367
           ++DA+ V   + +    P  ITYNTL++ L     +     ++  + +   +P V TY++
Sbjct: 180 FEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSM 239

Query: 368 LINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSS 427
           L+ GLC    V+RA+  +NQ+ SK  +PD+   N ++  LC  G +  AL L   +N   
Sbjct: 240 LMKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQLALSLYFDMNRWK 299

Query: 428 CSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAV 487
           C+P L+++NTL++G  K G +  A+V++ +++ NG+ PD I++   + G C  +++ +A+
Sbjct: 300 CAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLKGLCSCNRISDAI 359

Query: 488 DLLKE 492
             L +
Sbjct: 360 LFLHD 364



 Score =  146 bits (368), Expect = 4e-32,   Method: Compositional matrix adjust.
 Identities = 91/367 (24%), Positives = 163/367 (44%), Gaps = 36/367 (9%)

Query: 198 CKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYL 257
           C+ G I SA  +  E+  S   PD + YN +L   F   K K     W+    KG     
Sbjct: 1   CESGDIDSAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSKG----- 55

Query: 258 ITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINN 317
                                          +  + ++N ++      GK ++ + +   
Sbjct: 56  -------------------------------NRSVSSFNIMMRGLFDNGKVNEVISIWEL 84

Query: 318 LLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGL 377
           +   G   +SITY  L+H     G  +    +L++  +       F Y+ +INGLCK   
Sbjct: 85  MKKSGFVEDSITYGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEAN 144

Query: 378 VDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNT 437
           +D+A++  N M+   C+P+   YNT++  L       +A+++   +    CSP +ITYNT
Sbjct: 145 LDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVSKFEDAIRVFREMGTVHCSPTIITYNT 204

Query: 438 LIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRG 497
           LI+GL K     +A  L  ++++ G++P  IT+  L+ G C   +VE A+ L  ++  +G
Sbjct: 205 LINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKG 264

Query: 498 NKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAY 557
            K       ++IHGLC   K+ +A+ +   M   +  P+    +T+++    DG    A 
Sbjct: 265 FKPDVQMLNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNAL 324

Query: 558 KLWQKLI 564
            +W +++
Sbjct: 325 VIWARIL 331



 Score =  134 bits (338), Expect = 1e-28,   Method: Compositional matrix adjust.
 Identities = 84/300 (28%), Positives = 149/300 (49%), Gaps = 1/300 (0%)

Query: 268 CKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNS 327
           C+   I  A  V  ++     SPD V YN+++N   +  K  D   +   + S+G    S
Sbjct: 1   CESGDIDSAERVYKEIVESKVSPDAVVYNAMLNGYFRVAKIKDCFELWEMMGSKGNRSVS 60

Query: 328 ITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQ 387
            ++N ++  L   G  + V  I ++M ++       TY IL++G CK G ++++++    
Sbjct: 61  -SFNIMMRGLFDNGKVNEVISIWELMKKSGFVEDSITYGILVHGFCKNGYINKSLHVLEM 119

Query: 388 MVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGSSCSPCLITYNTLIDGLAKKGC 447
              K    D   Y+ ++  LCKE  L++A+ +L+ +  S C P    YNTL++GL     
Sbjct: 120 AEQKGGVLDAFAYSAMINGLCKEANLDKAVSVLNGMIKSGCKPNAHVYNTLVNGLVGVSK 179

Query: 448 MEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRL 507
            E A+ ++ +M     SP  IT+ TLI G C+ +   EA +L+KE+  +G       Y +
Sbjct: 180 FEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLDKGLNPGVITYSM 239

Query: 508 VIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIEWK 567
           ++ GLC   KV+ A+Q+   + S  +KPD  + + ++  +   G  + A  L+  +  WK
Sbjct: 240 LMKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQLALSLYFDMNRWK 299



 Score =  123 bits (309), Expect = 2e-25,   Method: Compositional matrix adjust.
 Identities = 86/310 (27%), Positives = 143/310 (46%), Gaps = 36/310 (11%)

Query: 112 FVENDEKTNNKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKA 171
           FVE D  T   ++  FC  G +  +  ++++  ++  + D      +I GL +   ++KA
Sbjct: 90  FVE-DSITYGILVHGFCKNGYINKSLHVLEMAEQKGGVLDAFAYSAMINGLCKEANLDKA 148

Query: 172 SKVLQIMVMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRT 231
             VL  M+ SG  P+   YN +V GL    +   AI +  EM    C P +ITYNT++  
Sbjct: 149 VSVLNGMIKSGCKPNAHVYNTLVNGLVGVSKFEDAIRVFREMGTVHCSPTIITYNTLING 208

Query: 232 MFDNGKFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPD 291
           +  N  F +A    K+ L KG  P +ITY++L++ +C    + RA+++ + +  +G  PD
Sbjct: 209 LCKNEMFGEAYNLVKELLDKGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPD 268

Query: 292 IVTYNSLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILD 351
           +   N L++  C  GK   A+ +  ++      PN +++NTL+      G         D
Sbjct: 269 VQMLNILIHGLCSVGKMQLALSLYFDMNRWKCAPNLVSHNTLMEGFYKDG---------D 319

Query: 352 IMNEASHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEG 411
           I N       V    IL NGL                     +PDI++YN  L  LC   
Sbjct: 320 IRN-----ALVIWARILRNGL---------------------EPDIISYNITLKGLCSCN 353

Query: 412 MLNEALQLLH 421
            +++A+  LH
Sbjct: 354 RISDAILFLH 363



 Score = 84.3 bits (207), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 52/209 (24%), Positives = 101/209 (48%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVM 180
           N ++       K  DA ++   M   +  P       LI GL + +   +A  +++ ++ 
Sbjct: 168 NTLVNGLVGVSKFEDAIRVFREMGTVHCSPTIITYNTLINGLCKNEMFGEAYNLVKELLD 227

Query: 181 SGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQ 240
            G  P  ITY+M++ GLC   ++  A+ L ++++  G +PDV   N ++  +   GK + 
Sbjct: 228 KGLNPGVITYSMLMKGLCLDHKVERALQLWNQVTSKGFKPDVQMLNILIHGLCSVGKMQL 287

Query: 241 AIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVN 300
           A+  + D  R  C P L+++  L+E   K   I  A+ +   +   G  PDI++YN  + 
Sbjct: 288 ALSLYFDMNRWKCAPNLVSHNTLMEGFYKDGDIRNALVIWARILRNGLEPDIISYNITLK 347

Query: 301 FSCKQGKYDDAVLVINNLLSRGMEPNSIT 329
             C   +  DA+L +++ +++ +    IT
Sbjct: 348 GLCSCNRISDAILFLHDAVTKKIVLTKIT 376


>gi|110289336|gb|ABG66168.1| Rf1 protein, mitochondrial precursor, putative, expressed [Oryza
           sativa Japonica Group]
          Length = 484

 Score =  186 bits (473), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 121/448 (27%), Positives = 216/448 (48%), Gaps = 15/448 (3%)

Query: 135 DASKLIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQI--MVMSGG---VPDTIT 189
           DA  + D + RR +    +    L   L  + R   A+ V +   M  +G     P+  T
Sbjct: 37  DARHVFDELLRRGRGASIY---GLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCT 93

Query: 190 YNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQL 249
           Y +++G  C  G++    A L  +   G   D I +  +L+ +  + +   A+     ++
Sbjct: 94  YGILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRM 153

Query: 250 RK-GCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEG--CSPDIVTYNSLVNFSCKQG 306
            + GC P + +Y IL++ +C +     A+E+L  M  +G  C PD+V+Y +++N   K+G
Sbjct: 154 TQLGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEG 213

Query: 307 KYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYN 366
             D A    + +L RG+ PN +TY++++ +L      D   ++L  M +    P   TYN
Sbjct: 214 DLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYN 273

Query: 367 ILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEALQLLHLLNGS 426
            +++G C  G    AI    +M S   +PD+VTYN+++  LCK G   EA ++   +   
Sbjct: 274 SIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKR 333

Query: 427 SCSPCLITYNTLIDGLAKKGCMEKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEA 486
              P + TY TL+ G A KG + +   L   M+ NGI P+      LI  + +  +V++A
Sbjct: 334 GLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQA 393

Query: 487 VDLLKEIGKRGNKMRNSAYRLVIHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKK 546
           + +  ++ ++G       Y  VI  LCKS +V+ A++  E MI  R  P + V+++++  
Sbjct: 394 MLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHS 453

Query: 547 VAD----DGMTEEAYKLWQKLIEWKVFE 570
           +      D   +   K W +   W +F 
Sbjct: 454 LCIFDKWDKAKDYFLKCWIEAFVWTLFS 481



 Score =  170 bits (431), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 102/326 (31%), Positives = 168/326 (51%), Gaps = 9/326 (2%)

Query: 123 ILQNFCSRGKLTDASKLIDIMARRNQ----IPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           +L+  C+  + +DA   +DI+ RR      IP+      L++GL   +R ++A ++LQ+M
Sbjct: 132 LLKGLCADKRTSDA---MDIVLRRMTQLGCIPNVFSYNILLKGLCDENRSQEALELLQMM 188

Query: 179 VMSGG--VPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNG 236
              GG   PD ++Y  ++ G  K G +  A     EM   G  P+V+TY++I+  +    
Sbjct: 189 PDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQ 248

Query: 237 KFKQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYN 296
              +A+      ++ G  P   TY  ++   C       AI  L  M  +G  PD+VTYN
Sbjct: 249 AMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYN 308

Query: 297 SLVNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEA 356
           SL+++ CK G+  +A  + +++  RG++P   TY TLL    ++G    +  +LD+M   
Sbjct: 309 SLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTLLQGYATKGALVEMHGLLDLMVRN 368

Query: 357 SHSPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALCKEGMLNEA 416
              P  + ++ILI    K G VD+A+  F++M  +   PD VTY TV+G LCK G + +A
Sbjct: 369 GIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGLNPDTVTYGTVIGILCKSGRVEDA 428

Query: 417 LQLLHLLNGSSCSPCLITYNTLIDGL 442
           ++    +     SP  I YN+LI  L
Sbjct: 429 MRYFEQMIDERLSPGNIVYNSLIHSL 454



 Score =  137 bits (344), Expect = 2e-29,   Method: Compositional matrix adjust.
 Identities = 87/307 (28%), Positives = 148/307 (48%), Gaps = 4/307 (1%)

Query: 83  HVLAVNKKLRGLTITKKSHDP----SLPSSDGPFVENDEKTNNKILQNFCSRGKLTDASK 138
           +V + N  L+GL    +S +      +   DG     D  +   ++  F   G L  A  
Sbjct: 161 NVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYG 220

Query: 139 LIDIMARRNQIPDFHFCINLIRGLIRIDRIEKASKVLQIMVMSGGVPDTITYNMMVGGLC 198
               M  R  +P+     ++I  L +   ++KA +VL  MV +G +P+  TYN +V G C
Sbjct: 221 TYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYC 280

Query: 199 KRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKFKQAIGFWKDQLRKGCPPYLI 258
             GQ + AI  L +M   G EPDV+TYN+++  +  NG+  +A   +    ++G  P + 
Sbjct: 281 SSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEIT 340

Query: 259 TYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSLVNFSCKQGKYDDAVLVINNL 318
           TY  L++    +  +     +LD M   G  P+   ++ L+    KQGK D A+LV + +
Sbjct: 341 TYGTLLQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKM 400

Query: 319 LSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASHSPTVFTYNILINGLCKYGLV 378
             +G+ P+++TY T++  L   G  +   +  + M +   SP    YN LI+ LC +   
Sbjct: 401 RQQGLNPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLCIFDKW 460

Query: 379 DRAINSF 385
           D+A + F
Sbjct: 461 DKAKDYF 467



 Score =  135 bits (340), Expect = 7e-29,   Method: Compositional matrix adjust.
 Identities = 78/290 (26%), Positives = 142/290 (48%), Gaps = 2/290 (0%)

Query: 121 NKILQNFCSRGKLTDASKLIDIMARRNQ--IPDFHFCINLIRGLIRIDRIEKASKVLQIM 178
           N +L+  C   +  +A +L+ +M        PD      +I G  +   ++KA      M
Sbjct: 166 NILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDLDKAYGTYHEM 225

Query: 179 VMSGGVPDTITYNMMVGGLCKRGQIRSAIALLDEMSVSGCEPDVITYNTILRTMFDNGKF 238
           +  G +P+ +TY+ ++  LCK   +  A+ +L  M  +G  P+  TYN+I+     +G+ 
Sbjct: 226 LDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSIVHGYCSSGQP 285

Query: 239 KQAIGFWKDQLRKGCPPYLITYTILIEQVCKQCGIARAIEVLDDMAIEGCSPDIVTYNSL 298
           K+AIGF K     G  P ++TY  L++ +CK      A ++ D M   G  P+I TY +L
Sbjct: 286 KEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTKRGLKPEITTYGTL 345

Query: 299 VNFSCKQGKYDDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH 358
           +     +G   +   +++ ++  G+ PN   ++ L+ +   +G  D    +   M +   
Sbjct: 346 LQGYATKGALVEMHGLLDLMVRNGIHPNHYVFSILICAYAKQGKVDQAMLVFSKMRQQGL 405

Query: 359 SPTVFTYNILINGLCKYGLVDRAINSFNQMVSKNCQPDIVTYNTVLGALC 408
           +P   TY  +I  LCK G V+ A+  F QM+ +   P  + YN+++ +LC
Sbjct: 406 NPDTVTYGTVIGILCKSGRVEDAMRYFEQMIDERLSPGNIVYNSLIHSLC 455



 Score =  113 bits (283), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 74/297 (24%), Positives = 135/297 (45%), Gaps = 40/297 (13%)

Query: 309 DDAVLVINNLLSRGMEPNSITYNTLLHSLGSRGCWDAVDKILDIMNEASH--SPTVFTYN 366
           +DA  V + LL RG   +    N  L  +       AV +   +    +   +P + TY 
Sbjct: 36  EDARHVFDELLRRGRGASIYGLNCALADVARHSPAAAVSRYNRMARAGADEVTPNLCTYG 95

Query: 367 ILINGLCKYGLVDRAINSFNQMVSK----------------------------------- 391
           ILI   C  G +D    +   ++ K                                   
Sbjct: 96  ILIGSCCCAGRLDLGFAALGNVIKKGFRVDAIAFTPLLKGLCADKRTSDAMDIVLRRMTQ 155

Query: 392 -NCQPDIVTYNTVLGALCKEGMLNEALQLLHLL--NGSSCSPCLITYNTLIDGLAKKGCM 448
             C P++ +YN +L  LC E    EAL+LL ++  +G  C P +++Y T+I+G  K+G +
Sbjct: 156 LGCIPNVFSYNILLKGLCDENRSQEALELLQMMPDDGGDCPPDVVSYTTVINGFFKEGDL 215

Query: 449 EKAMVLYGQMMENGISPDDITHRTLIWGFCRADQVEEAVDLLKEIGKRGNKMRNSAYRLV 508
           +KA   Y +M++ GI P+ +T+ ++I   C+A  +++A+++L  + K G       Y  +
Sbjct: 216 DKAYGTYHEMLDRGILPNVVTYSSIIAALCKAQAMDKAMEVLTSMVKNGVMPNCRTYNSI 275

Query: 509 IHGLCKSKKVDMAIQVLELMISSRYKPDDTVFSTIVKKVADDGMTEEAYKLWQKLIE 565
           +HG C S +   AI  L+ M S   +PD   +++++  +  +G   EA K++  + +
Sbjct: 276 VHGYCSSGQPKEAIGFLKKMHSDGVEPDVVTYNSLMDYLCKNGRCTEARKMFDSMTK 332


  Database: nr
    Posted date:  Mar 3, 2013 10:45 PM
  Number of letters in database: 999,999,864
  Number of sequences in database:  2,912,245
  
  Database: /local_scratch/syshi//blastdatabase/nr.01
    Posted date:  Mar 3, 2013 10:52 PM
  Number of letters in database: 999,999,666
  Number of sequences in database:  2,912,720
  
  Database: /local_scratch/syshi//blastdatabase/nr.02
    Posted date:  Mar 3, 2013 10:58 PM
  Number of letters in database: 999,999,938
  Number of sequences in database:  3,014,250
  
  Database: /local_scratch/syshi//blastdatabase/nr.03
    Posted date:  Mar 3, 2013 11:03 PM
  Number of letters in database: 999,999,780
  Number of sequences in database:  2,805,020
  
  Database: /local_scratch/syshi//blastdatabase/nr.04
    Posted date:  Mar 3, 2013 11:08 PM
  Number of letters in database: 999,999,551
  Number of sequences in database:  2,816,253
  
  Database: /local_scratch/syshi//blastdatabase/nr.05
    Posted date:  Mar 3, 2013 11:13 PM
  Number of letters in database: 999,999,897
  Number of sequences in database:  2,981,387
  
  Database: /local_scratch/syshi//blastdatabase/nr.06
    Posted date:  Mar 3, 2013 11:18 PM
  Number of letters in database: 999,999,649
  Number of sequences in database:  2,911,476
  
  Database: /local_scratch/syshi//blastdatabase/nr.07
    Posted date:  Mar 3, 2013 11:24 PM
  Number of letters in database: 999,999,452
  Number of sequences in database:  2,920,260
  
  Database: /local_scratch/syshi//blastdatabase/nr.08
    Posted date:  Mar 3, 2013 11:25 PM
  Number of letters in database: 64,230,274
  Number of sequences in database:  189,558
  
Lambda     K      H
   0.321    0.137    0.415 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 8,860,867,672
Number of Sequences: 23463169
Number of extensions: 352653152
Number of successful extensions: 1028549
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 7662
Number of HSP's successfully gapped in prelim test: 4715
Number of HSP's that attempted gapping in prelim test: 800648
Number of HSP's gapped (non-prelim): 79650
length of query: 577
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 429
effective length of database: 8,886,646,355
effective search space: 3812371286295
effective search space used: 3812371286295
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 80 (35.4 bits)